Citrus Sinensis ID: 017431
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 371 | 2.2.26 [Sep-21-2011] | |||||||
| P93629 | 381 | Alcohol dehydrogenase cla | N/A | no | 0.994 | 0.968 | 0.918 | 0.0 | |
| Q96533 | 379 | Alcohol dehydrogenase cla | yes | no | 0.986 | 0.965 | 0.915 | 0.0 | |
| A2XAZ3 | 381 | Alcohol dehydrogenase cla | N/A | no | 0.986 | 0.960 | 0.918 | 0.0 | |
| Q0DWH1 | 381 | Alcohol dehydrogenase cla | yes | no | 0.986 | 0.960 | 0.915 | 0.0 | |
| P80572 | 378 | Alcohol dehydrogenase cla | N/A | no | 0.997 | 0.978 | 0.878 | 0.0 | |
| P79896 | 376 | Alcohol dehydrogenase cla | N/A | no | 0.983 | 0.970 | 0.696 | 1e-151 | |
| P81600 | 375 | Alcohol dehydrogenase cla | N/A | no | 0.983 | 0.973 | 0.674 | 1e-147 | |
| Q3ZC42 | 374 | Alcohol dehydrogenase cla | yes | no | 0.989 | 0.981 | 0.690 | 1e-147 | |
| P80467 | 373 | Alcohol dehydrogenase cla | N/A | no | 0.989 | 0.983 | 0.692 | 1e-146 | |
| P86884 | 376 | Alcohol dehydrogenase cla | N/A | no | 0.989 | 0.976 | 0.682 | 1e-146 |
| >sp|P93629|ADHX_MAIZE Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 706 bits (1822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/369 (91%), Positives = 353/369 (95%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVA+EPNKPLVIEDVQVAPPQAGEVR+KILFTALCHTD YTWSGKDPEGLFPCILGH
Sbjct: 12 CKAAVAYEPNKPLVIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGH 71
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
EAAGIVESVGEGVT+VQPGDHVIPCYQAEC+ECKFCKSGKTNLCGKVR ATG GVMMND
Sbjct: 72 EAAGIVESVGEGVTDVQPGDHVIPCYQAECKECKFCKSGKTNLCGKVRSATGVGVMMNDM 131
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
KSRFS+NGKPIYHFMGTSTFSQYTVVHDVSVAKI+PQAPLDKVCLLGCGVPTGLGAVWNT
Sbjct: 132 KSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVPTGLGAVWNT 191
Query: 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKVE GS+VAVFGLGTVGLAVAEGAKAAGASRVIGIDID KKFD AKNFGVTEFVNPK+H
Sbjct: 192 AKVESGSVVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDNKKFDVAKNFGVTEFVNPKEH 251
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
DKPIQQVLVDLTDGGVDYSFECIGNVS+MRAALEC KGWGTSVIVGVAASGQEISTRPF
Sbjct: 252 DKPIQQVLVDLTDGGVDYSFECIGNVSIMRAALECSDKGWGTSVIVGVAASGQEISTRPF 311
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
QLVTGRVWKGTAFGGFKSR+QVPWLVDKYMKKEIKVDEY+THNM L +IN+AF +H G
Sbjct: 312 QLVTGRVWKGTAFGGFKSRTQVPWLVDKYMKKEIKVDEYITHNMNLADINDAFHLLHEGG 371
Query: 362 CLRCVLKMQ 370
CLRCVL MQ
Sbjct: 372 CLRCVLAMQ 380
|
Zea mays (taxid: 4577) EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 8EC: 4 |
| >sp|Q96533|ADHX_ARATH Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana GN=ADH2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/366 (91%), Positives = 351/366 (95%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVA+EPNKPLVIEDVQVAPPQAGEVRIKIL+TALCHTDAYTWSGKDPEGLFPCILGH
Sbjct: 10 CKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGH 69
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
EAAGIVESVGEGVTEVQ GDHVIPCYQAECRECKFCKSGKTNLCGKVR ATG G+MMNDR
Sbjct: 70 EAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDR 129
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
KSRFS+NGKPIYHFMGTSTFSQYTVVHDVSVAKIDP APLDKVCLLGCGVPTGLGAVWNT
Sbjct: 130 KSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNT 189
Query: 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKVEPGS VA+FGLGTVGLAVAEGAK AGASR+IGIDID KK++ AK FGV EFVNPKDH
Sbjct: 190 AKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDH 249
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
DKPIQ+V+VDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF
Sbjct: 250 DKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 309
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
QLVTGRVWKGTAFGGFKSR+QVPWLV+KYM KEIKVDEY+THN+TLGEIN+AF +H G
Sbjct: 310 QLVTGRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGT 369
Query: 362 CLRCVL 367
CLRCVL
Sbjct: 370 CLRCVL 375
|
Plays a central role in formaldehyde detoxification. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 8 EC: 4 |
| >sp|A2XAZ3|ADHX_ORYSI Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1 | Back alignment and function description |
|---|
Score = 703 bits (1815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/366 (91%), Positives = 350/366 (95%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVAWE NKP+ IEDVQVAPPQAGEVR+KILFTALCHTD YTWSGKDPEGLFPCILGH
Sbjct: 12 CKAAVAWEANKPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGH 71
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR ATG GVMMNDR
Sbjct: 72 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDR 131
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI+PQAPLDKVCLLGCGV TGLGAVWNT
Sbjct: 132 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVSTGLGAVWNT 191
Query: 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKVE GSIVA+FGLGTVGLAVAEGAK+AGASR+IGIDID KKFD AKNFGVTEFVNPKDH
Sbjct: 192 AKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVTEFVNPKDH 251
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
DKPIQQV+VDLTDGGVDYSFECIGNVSVMR+ALECCHKGWGTSVIVGVAASGQEISTRPF
Sbjct: 252 DKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPF 311
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
QLVTGRVWKGTAFGGFKSRSQVPWLV+KY+ KEIKVDEYVTH+M L +IN+AF +H G
Sbjct: 312 QLVTGRVWKGTAFGGFKSRSQVPWLVEKYLNKEIKVDEYVTHSMNLTDINKAFDLLHEGG 371
Query: 362 CLRCVL 367
CLRCVL
Sbjct: 372 CLRCVL 377
|
Oryza sativa subsp. indica (taxid: 39946) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 8 EC: 4 |
| >sp|Q0DWH1|ADHX_ORYSJ Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/366 (91%), Positives = 350/366 (95%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVAWE N+P+ IEDVQVAPPQAGEVR+KILFTALCHTD YTWSGKDPEGLFPCILGH
Sbjct: 12 CKAAVAWEANRPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGH 71
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR ATG GVMMNDR
Sbjct: 72 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDR 131
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI+PQAPLDKVCLLGCGV TGLGAVWNT
Sbjct: 132 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVSTGLGAVWNT 191
Query: 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKVE GSIVA+FGLGTVGLAVAEGAK+AGASR+IGIDID KKFD AKNFGVTEFVNPKDH
Sbjct: 192 AKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVTEFVNPKDH 251
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
DKPIQQV+VDLTDGGVDYSFECIGNVSVMR+ALECCHKGWGTSVIVGVAASGQEISTRPF
Sbjct: 252 DKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPF 311
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
QLVTGRVWKGTAFGGFKSRSQVPWLV+KY+ KEIKVDEYVTH+M L +IN+AF +H G
Sbjct: 312 QLVTGRVWKGTAFGGFKSRSQVPWLVEKYLNKEIKVDEYVTHSMNLTDINKAFDLLHEGG 371
Query: 362 CLRCVL 367
CLRCVL
Sbjct: 372 CLRCVL 377
|
Oryza sativa subsp. japonica (taxid: 39947) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 8 EC: 4 |
| >sp|P80572|ADHX_PEA Alcohol dehydrogenase class-3 OS=Pisum sativum PE=1 SV=1 | Back alignment and function description |
|---|
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/370 (87%), Positives = 347/370 (93%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVAWEPNKPL IEDV+VAPPQA EVRI+ILFTALCHTDAYT GKDPEGLFPCILGH
Sbjct: 9 CKAAVAWEPNKPLTIEDVEVAPPQANEVRIQILFTALCHTDAYTLGGKDPEGLFPCILGH 68
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
EAAGIVESVGEGVT+V+PGDHVIP YQAEC ECKFCKS KTNLCGKVR ATG GVMM DR
Sbjct: 69 EAAGIVESVGEGVTDVKPGDHVIPSYQAECGECKFCKSPKTNLCGKVRAATGVGVMMADR 128
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
KSRFS+ GKPIYHFMGTSTFSQYTVVHDVSVAKI P APLDKVCLLGCGVPTGLGAVWNT
Sbjct: 129 KSRFSVKGKPIYHFMGTSTFSQYTVVHDVSVAKIHPDAPLDKVCLLGCGVPTGLGAVWNT 188
Query: 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKVEPGSIVA+FGLGTVGLAVAEGAK+AGASR+IGIDID K+D AKNFGVTEF+NPKDH
Sbjct: 189 AKVEPGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSNKYDTAKNFGVTEFINPKDH 248
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
+KPIQQV++DLTDGGVDYSFEC+GNVSVMR+ALECCHKGWGTSVIVGVAASGQEISTRPF
Sbjct: 249 EKPIQQVIIDLTDGGVDYSFECLGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPF 308
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
QLVTGRVWKGTAFGGFKSRSQVPWLV+KY+KKEIKVDEY+THN+TL EIN+AF +H G
Sbjct: 309 QLVTGRVWKGTAFGGFKSRSQVPWLVEKYLKKEIKVDEYITHNLTLLEINKAFDLLHEGQ 368
Query: 362 CLRCVLKMQD 371
CLRCVL + D
Sbjct: 369 CLRCVLAVHD 378
|
Class-III ADH is remarkably ineffective in oxidizing ethanol, but it readily catalyzes the oxidation of long-chain primary alcohols and the oxidation of S-(hydroxymethyl) glutathione. Pisum sativum (taxid: 3888) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 8 EC: 4 |
| >sp|P79896|ADHX_SPAAU Alcohol dehydrogenase class-3 OS=Sparus aurata PE=2 SV=1 | Back alignment and function description |
|---|
Score = 535 bits (1377), Expect = e-151, Method: Compositional matrix adjust.
Identities = 255/366 (69%), Positives = 297/366 (81%), Gaps = 1/366 (0%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVAWEP KPL IE+V+VAPP A EVRIK+ T +CHTDAYT SG DPEGLFP ILGH
Sbjct: 10 CKAAVAWEPGKPLSIEEVEVAPPNAHEVRIKLFATGVCHTDAYTLSGSDPEGLFPVILGH 69
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
E AG VESVGEGVT+ +PGD VIP Y +C ECKFCK+ KTNLC K+R G G ++ D+
Sbjct: 70 EGAGTVESVGEGVTKFKPGDTVIPLYVPQCGECKFCKNPKTNLCQKIRITQGQG-LLPDK 128
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
SRF+ GK ++HFMGTSTFS+YTVV D+S+AK++ +AP+DKVCLLGCG+ TG GA NT
Sbjct: 129 TSRFTCKGKQVFHFMGTSTFSEYTVVADISLAKVNEKAPMDKVCLLGCGISTGYGAALNT 188
Query: 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKVEPGS AVFGLG VGLAV G K AGA+R+IGID++P KF+ AK FG TEFVNPKDH
Sbjct: 189 AKVEPGSTCAVFGLGAVGLAVIMGCKVAGATRIIGIDLNPAKFETAKEFGATEFVNPKDH 248
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
KPIQ+VLV++TDGGVDYSFECIGNV +MRAALE CHKGWG SVI+GVA +GQEISTRPF
Sbjct: 249 SKPIQEVLVEMTDGGVDYSFECIGNVQIMRAALEACHKGWGESVIIGVAGAGQEISTRPF 308
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
QLVTGRVWKGTAFGG+KS VP LV+ YM K++KVDE+VTH + +INE F MH G
Sbjct: 309 QLVTGRVWKGTAFGGWKSVESVPKLVEDYMSKKLKVDEFVTHTLPFEKINEGFELMHAGK 368
Query: 362 CLRCVL 367
+R VL
Sbjct: 369 SIRTVL 374
|
Class-III ADH is remarkably ineffective in oxidizing ethanol, but it readily catalyzes the oxidation of long-chain primary alcohols and the oxidation of S-(hydroxymethyl) glutathione. Sparus aurata (taxid: 8175) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 8 EC: 4 |
| >sp|P81600|ADHH_GADMO Alcohol dehydrogenase class-3 chain H OS=Gadus morhua PE=1 SV=1 | Back alignment and function description |
|---|
Score = 522 bits (1344), Expect = e-147, Method: Compositional matrix adjust.
Identities = 247/366 (67%), Positives = 294/366 (80%), Gaps = 1/366 (0%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVAWE KPL +E+V+VAPP+AGEVRIK++ T +CHTDAYT SG DPEG FP ILGH
Sbjct: 9 CKAAVAWEAGKPLSLEEVEVAPPRAGEVRIKVVATGVCHTDAYTLSGSDPEGAFPVILGH 68
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
E AG+VESVGEGVT+ + GD VIP Y +C ECKFCK+ KTNLC K+R G G +M D
Sbjct: 69 EGAGLVESVGEGVTKFKAGDTVIPLYVPQCGECKFCKNPKTNLCQKIRVTQGRG-LMPDN 127
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
SRF+ GK ++HFMGTSTFS+YTVV D+S+A +DP+APLDKVCLLGCG+ TG GA NT
Sbjct: 128 TSRFTCKGKQLFHFMGTSTFSEYTVVADISLANVDPKAPLDKVCLLGCGISTGYGAALNT 187
Query: 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKVEPGS AVFGLG VGLA G K AGA+R+IG+DI+P+KF +A FG TE +NPKDH
Sbjct: 188 AKVEPGSTCAVFGLGAVGLAAIMGCKVAGATRIIGVDINPEKFGKAAEFGATECLNPKDH 247
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
+P+Q+VLV++TDGGVDYSFECIGNV +MR+ALE CHKGWG SVI+GVA +GQEI+TRPF
Sbjct: 248 ARPVQEVLVEMTDGGVDYSFECIGNVEIMRSALEACHKGWGESVIIGVAGAGQEIATRPF 307
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
QLVTGRVWK TAFGG+KS VP LV+ YM K++KVDE+VTH + INE F MH G
Sbjct: 308 QLVTGRVWKATAFGGWKSVESVPKLVEDYMNKKLKVDEFVTHTLPFDSINEGFDLMHAGK 367
Query: 362 CLRCVL 367
+RCVL
Sbjct: 368 SIRCVL 373
|
Class-III ADH is remarkably ineffective in oxidizing ethanol, but it readily catalyzes the oxidation of long-chain primary alcohols and the oxidation of S-(hydroxymethyl) glutathione. Gadus morhua (taxid: 8049) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 8 EC: 4 |
| >sp|Q3ZC42|ADHX_BOVIN Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH5 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 520 bits (1339), Expect = e-147, Method: Compositional matrix adjust.
Identities = 254/368 (69%), Positives = 296/368 (80%), Gaps = 1/368 (0%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVAWE KPL IE+V+VAPP+A EVRIKI+ TA+CHTDAYT SG DPEG +P ILGH
Sbjct: 8 CKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGNYPVILGH 67
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
E AGIVESVGEGVT+++ GD VIP Y +C ECKFC + KTNLC K+R G G +M D
Sbjct: 68 EGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-LMPDG 126
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
SRF+ GK I H+MGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCG+ TG GA N
Sbjct: 127 TSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAALNA 186
Query: 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKVEPGS AVFGLG VGLAV G K AGA+R+IG+DI+ KF RAK FG +E +NP+D
Sbjct: 187 AKVEPGSTCAVFGLGGVGLAVIMGCKMAGAARIIGVDINKDKFARAKEFGASECINPQDF 246
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
KPIQ+VL+++TDGGVDYSFECIGNV VMRAALE CHKGWG SV+VGVAASG+EI+TRPF
Sbjct: 247 SKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGISVVVGVAASGEEIATRPF 306
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
QLVTGR WKGTAFGG+KS VP LV +YM K+IKVDE+VTH++ +INEAF MH G
Sbjct: 307 QLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHSLPFDQINEAFDLMHAGK 366
Query: 362 CLRCVLKM 369
+R V+K+
Sbjct: 367 SIRTVVKL 374
|
Class-III ADH is remarkably ineffective in oxidizing ethanol, but it readily catalyzes the oxidation of long-chain primary alcohols and the oxidation of S-(hydroxymethyl) glutathione. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 8 EC: 4 |
| >sp|P80467|ADHX_UROHA Alcohol dehydrogenase class-3 OS=Uromastyx hardwickii PE=1 SV=1 | Back alignment and function description |
|---|
Score = 520 bits (1338), Expect = e-146, Method: Compositional matrix adjust.
Identities = 255/368 (69%), Positives = 293/368 (79%), Gaps = 1/368 (0%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVAWE KPL IE+++VAPP+A EVR+KI+ TA+CHTDAYT SG DPEG FP ILGH
Sbjct: 7 CKAAVAWEAGKPLSIEEIEVAPPKAHEVRVKIIATAVCHTDAYTLSGADPEGSFPVILGH 66
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
E AGIVESVGEGVT+ +PGD VIP Y +C ECKFC + KTNLC K+R G GVM D
Sbjct: 67 EGAGIVESVGEGVTKFKPGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGVM-PDG 125
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
SRF+ GK + HFMGTSTFS+YTVV D+S+ KI+ APLDKVCLLGCGV TG GA NT
Sbjct: 126 TSRFTCKGKQVLHFMGTSTFSEYTVVADISLTKINASAPLDKVCLLGCGVSTGYGAALNT 185
Query: 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKVEPGS AVFGLG VGLAV G K AGASR+IGID++ KF +AK FG TE ++P D
Sbjct: 186 AKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGIDLNKDKFAKAKEFGATECISPADF 245
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
KPIQ+VL+++TDGGVDYSFECIGNV VMRAALE CHKGWG SVIVGVAA+GQEI+TRPF
Sbjct: 246 KKPIQEVLIEMTDGGVDYSFECIGNVGVMRAALEACHKGWGVSVIVGVAAAGQEIATRPF 305
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
QLVTGR WKGTAFGG+KS VP LVD+YM K++KVDE+VTH + +INEAF MH G
Sbjct: 306 QLVTGRTWKGTAFGGWKSVESVPKLVDEYMSKKMKVDEFVTHTLPFEQINEAFELMHAGK 365
Query: 362 CLRCVLKM 369
+R VLK
Sbjct: 366 SIRSVLKF 373
|
Class-III ADH is remarkably ineffective in oxidizing ethanol, but it readily catalyzes the oxidation of long-chain primary alcohols and the oxidation of S-(hydroxymethyl) glutathione. Uromastyx hardwickii (taxid: 40250) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 8 EC: 4 |
| >sp|P86884|ADHX_SCYCA Alcohol dehydrogenase class-3 OS=Scyliorhinus canicula PE=1 SV=1 | Back alignment and function description |
|---|
Score = 518 bits (1333), Expect = e-146, Method: Compositional matrix adjust.
Identities = 251/368 (68%), Positives = 294/368 (79%), Gaps = 1/368 (0%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVAWE KPL IE+++VAPP+A EVRIKI+ TA+CH+D+YT SG D EGLFP ILGH
Sbjct: 10 CKAAVAWEAGKPLCIEEIEVAPPKAHEVRIKIIATAVCHSDSYTLSGSDSEGLFPVILGH 69
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
E AGIVESVGEGVT V+ GD VIP Y +C +C FC + KTNLC K+R G G +M D+
Sbjct: 70 EGAGIVESVGEGVTCVKAGDRVIPLYIPQCGDCNFCLNPKTNLCQKIRVTQGQG-LMPDK 128
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
SRF+ G+ +YH+MGTSTFS+YTVV D+SVAKID APLDKVCLLGCG+ TG GA NT
Sbjct: 129 TSRFTCKGQLLYHYMGTSTFSEYTVVADISVAKIDEAAPLDKVCLLGCGISTGYGAAVNT 188
Query: 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKVEPGS AVFGLG VGLA G KAAGA+R+IG+D++ KF +AK FG TE++NPKD+
Sbjct: 189 AKVEPGSTCAVFGLGGVGLAGIMGCKAAGATRIIGVDLNKDKFTKAKEFGATEYINPKDY 248
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
DKPIQ+VLV LTDGGVDYSFECIGNV MRAALE CHKGWGTSVIVGVA +G EI+TRPF
Sbjct: 249 DKPIQEVLVGLTDGGVDYSFECIGNVKTMRAALEACHKGWGTSVIVGVAPAGHEIATRPF 308
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
QLVTGR WKGTAFGG+KS VP LV +YM K++KVDE+VTH + +INE+F MH G
Sbjct: 309 QLVTGRTWKGTAFGGWKSVESVPKLVKEYMAKKLKVDEFVTHTLPFNQINESFELMHAGK 368
Query: 362 CLRCVLKM 369
+RCVL
Sbjct: 369 SIRCVLSF 376
|
Class-III ADH is remarkably ineffective in oxidizing ethanol, but it readily catalyzes the oxidation of long-chain primary alcohols and the oxidation of S-(hydroxymethyl) glutathione. Scyliorhinus canicula (taxid: 7830) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 8 EC: 4 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 371 | ||||||
| 255585914 | 379 | alcohol dehydrogenase, putative [Ricinus | 1.0 | 0.978 | 0.929 | 0.0 | |
| 433286663 | 396 | Chain A, Crystal Structure Of S-nitrosog | 0.991 | 0.929 | 0.926 | 0.0 | |
| 353703786 | 379 | alcohol dehydrogenase class III [Solanum | 0.991 | 0.970 | 0.926 | 0.0 | |
| 429840534 | 378 | alcohol dehydrogenase 2 [Diospyros kaki] | 0.991 | 0.973 | 0.926 | 0.0 | |
| 242063486 | 381 | hypothetical protein SORBIDRAFT_04g03705 | 0.994 | 0.968 | 0.924 | 0.0 | |
| 224065517 | 379 | glutathione-dependent formaldehyde dehyd | 0.994 | 0.973 | 0.924 | 0.0 | |
| 325910821 | 379 | glutathione-dependent formaldehyde dehyd | 0.994 | 0.973 | 0.926 | 0.0 | |
| 195621922 | 381 | alcohol dehydrogenase class 3 [Zea mays] | 0.994 | 0.968 | 0.924 | 0.0 | |
| 194688556 | 381 | unknown [Zea mays] gi|194707152|gb|ACF87 | 0.994 | 0.968 | 0.924 | 0.0 | |
| 195625730 | 381 | alcohol dehydrogenase class 3 [Zea mays] | 0.994 | 0.968 | 0.921 | 0.0 |
| >gi|255585914|ref|XP_002533630.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223526488|gb|EEF28759.1| alcohol dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/371 (92%), Positives = 361/371 (97%)
Query: 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILG 60
+CKAAVA+EPNKPLVIEDVQVAPPQAGEVR++ILFTALCHTDAYTWSGKDPEGLFPCILG
Sbjct: 9 ICKAAVAYEPNKPLVIEDVQVAPPQAGEVRVQILFTALCHTDAYTWSGKDPEGLFPCILG 68
Query: 61 HEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 120
HEAAGIVESVGEGVTEVQPGDHVIPCYQAECR+CKFCKSGKTNLCGKVR ATG GVMMND
Sbjct: 69 HEAAGIVESVGEGVTEVQPGDHVIPCYQAECRDCKFCKSGKTNLCGKVRAATGVGVMMND 128
Query: 121 RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN 180
RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP+APL+KVCLLGCGVPTGLGAVWN
Sbjct: 129 RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPKAPLEKVCLLGCGVPTGLGAVWN 188
Query: 181 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240
TAKVE GSIVAVFGLGTVGLAVAEGAKAAGASR+IGIDID KK+DRAK+FGVTEFVNPKD
Sbjct: 189 TAKVEAGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKYDRAKDFGVTEFVNPKD 248
Query: 241 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP 300
HDKPIQQV+VDLTDGGVDYSFECIGNVSVMR+ALECCHKGWGTSVIVGVAASGQEISTRP
Sbjct: 249 HDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRP 308
Query: 301 FQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGG 360
FQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEY+THN+TL EIN+AF MH G
Sbjct: 309 FQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYITHNLTLVEINKAFDLMHEG 368
Query: 361 DCLRCVLKMQD 371
DCLRCVL + D
Sbjct: 369 DCLRCVLSVHD 379
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|433286663|pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ gi|433286664|pdb|4DL9|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ gi|433286665|pdb|4DLA|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase Apoenzyme From Tomato (solanum Lycopersicum) gi|433286666|pdb|4DLA|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase Apoenzyme From Tomato (solanum Lycopersicum) gi|433286667|pdb|4DLB|A Chain A, Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) Crystallized In Presence Of Nadh And Glutathione gi|433286668|pdb|4DLB|B Chain B, Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) Crystallized In Presence Of Nadh And Glutathione | Back alignment and taxonomy information |
|---|
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/368 (92%), Positives = 357/368 (97%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVAWEPNKPLVIEDVQVAPPQAGEVR+K+L+TALCHTDAYTWSGKDPEGLFPC+LGH
Sbjct: 27 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRVKVLYTALCHTDAYTWSGKDPEGLFPCVLGH 86
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR ATG GVMMNDR
Sbjct: 87 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDR 146
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP APL+KVCLLGCGVPTGLGAVWNT
Sbjct: 147 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPVAPLEKVCLLGCGVPTGLGAVWNT 206
Query: 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASR+IGIDID KKFDRAKNFGVTEF+NPK+H
Sbjct: 207 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKFDRAKNFGVTEFINPKEH 266
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
++PIQQV+VDLTDGGVDYSFECIGNVSVMR+ALECCHKGWGTSVIVGVAASGQEISTRPF
Sbjct: 267 EQPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPF 326
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
QLVTGRVWKGTAFGGFKSRSQVP LVDKY+KKEIKVDEY+THNMTL +IN+AF MH GD
Sbjct: 327 QLVTGRVWKGTAFGGFKSRSQVPSLVDKYLKKEIKVDEYITHNMTLADINKAFDLMHDGD 386
Query: 362 CLRCVLKM 369
CLR VL M
Sbjct: 387 CLRVVLDM 394
|
Source: Solanum lycopersicum Species: Solanum lycopersicum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|353703786|ref|NP_001238796.1| alcohol dehydrogenase class III [Solanum lycopersicum] gi|283825505|gb|ADB43258.1| alcohol dehydrogenase class III [Solanum lycopersicum] gi|322719690|gb|ADX07743.1| alcohol dehydrogenase class III [Solanum habrochaites] gi|322719692|gb|ADX07744.1| alcohol dehydrogenase class III [Solanum chmielewskii] | Back alignment and taxonomy information |
|---|
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/368 (92%), Positives = 357/368 (97%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVAWEPNKPLVIEDVQVAPPQAGEVR+K+L+TALCHTDAYTWSGKDPEGLFPC+LGH
Sbjct: 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRVKVLYTALCHTDAYTWSGKDPEGLFPCVLGH 69
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR ATG GVMMNDR
Sbjct: 70 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDR 129
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP APL+KVCLLGCGVPTGLGAVWNT
Sbjct: 130 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPVAPLEKVCLLGCGVPTGLGAVWNT 189
Query: 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASR+IGIDID KKFDRAKNFGVTEF+NPK+H
Sbjct: 190 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKFDRAKNFGVTEFINPKEH 249
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
++PIQQV+VDLTDGGVDYSFECIGNVSVMR+ALECCHKGWGTSVIVGVAASGQEISTRPF
Sbjct: 250 EQPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPF 309
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
QLVTGRVWKGTAFGGFKSRSQVP LVDKY+KKEIKVDEY+THNMTL +IN+AF MH GD
Sbjct: 310 QLVTGRVWKGTAFGGFKSRSQVPSLVDKYLKKEIKVDEYITHNMTLADINKAFDLMHDGD 369
Query: 362 CLRCVLKM 369
CLR VL M
Sbjct: 370 CLRVVLDM 377
|
Source: Solanum lycopersicum Species: Solanum lycopersicum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|429840534|gb|AGA15794.1| alcohol dehydrogenase 2 [Diospyros kaki] | Back alignment and taxonomy information |
|---|
Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/368 (92%), Positives = 352/368 (95%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVAWEPNKPL IEDVQVAPPQAGEVRI+ILFTALCHTDAYTWSGKDPEGLFPCILGH
Sbjct: 10 CKAAVAWEPNKPLAIEDVQVAPPQAGEVRIQILFTALCHTDAYTWSGKDPEGLFPCILGH 69
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
EAAGIVESVGEGVTEV PGDHVIPCYQAECRECKFCKSGKTNLCGKVR ATG GVMMNDR
Sbjct: 70 EAAGIVESVGEGVTEVHPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDR 129
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
KSRFSING PIYHFMGTSTFSQYTVVHDVSVAKIDP APL+KVCLLGCGVPTGLGAVWNT
Sbjct: 130 KSRFSINGTPIYHFMGTSTFSQYTVVHDVSVAKIDPIAPLEKVCLLGCGVPTGLGAVWNT 189
Query: 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKVEPGSIVA+FGLGTVGLAVAEGAK+AGASR+IGIDID KKFD AKNFGVTEFVNPKDH
Sbjct: 190 AKVEPGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDTAKNFGVTEFVNPKDH 249
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
DKPIQQV+VDLTDGGVDYSFECIGNVSVMR+ALECCHKGWGTSVIVGVAASGQEISTRPF
Sbjct: 250 DKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPF 309
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
QLVTGRVWKGTAFGGFKSRS VPWLVDKY+KKEIKVDEY+THN+ L +INEAF MH G
Sbjct: 310 QLVTGRVWKGTAFGGFKSRSHVPWLVDKYLKKEIKVDEYITHNLALAQINEAFHLMHEGG 369
Query: 362 CLRCVLKM 369
C RCVLKM
Sbjct: 370 CFRCVLKM 377
|
Source: Diospyros kaki Species: Diospyros kaki Genus: Diospyros Family: Ebenaceae Order: Ericales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|242063486|ref|XP_002453032.1| hypothetical protein SORBIDRAFT_04g037050 [Sorghum bicolor] gi|241932863|gb|EES06008.1| hypothetical protein SORBIDRAFT_04g037050 [Sorghum bicolor] | Back alignment and taxonomy information |
|---|
Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/369 (92%), Positives = 354/369 (95%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVA+EPNKPLVIEDVQVAPPQAGEVR+KILFTALCHTD YTWSGKDPEGLFPCILGH
Sbjct: 12 CKAAVAYEPNKPLVIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGH 71
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
EAAG+VESVGEGVTEVQPGDHVIPCYQAEC+ECKFCKSGKTNLCGKVR ATG GVMMND
Sbjct: 72 EAAGVVESVGEGVTEVQPGDHVIPCYQAECKECKFCKSGKTNLCGKVRSATGVGVMMNDM 131
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
KSRFS+NGKPIYHFMGTSTFSQYTVVHDVSVAKI+PQAPLDKVCLLGCGVPTGLGAVWNT
Sbjct: 132 KSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVPTGLGAVWNT 191
Query: 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKVE GSIVAVFGLGTVGLAVAEGAKAAGASR+IGIDID KKFD AKNFGVTEFVNPKDH
Sbjct: 192 AKVEAGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDNKKFDVAKNFGVTEFVNPKDH 251
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI+TRPF
Sbjct: 252 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIATRPF 311
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
QLVTGRVWKGTAFGGFKSR+QVPWLVDKYM KEIKVDEY+THNM L +IN+AF +H G
Sbjct: 312 QLVTGRVWKGTAFGGFKSRTQVPWLVDKYMNKEIKVDEYITHNMNLADINDAFHLLHEGG 371
Query: 362 CLRCVLKMQ 370
CLRCVL MQ
Sbjct: 372 CLRCVLAMQ 380
|
Source: Sorghum bicolor Species: Sorghum bicolor Genus: Sorghum Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224065517|ref|XP_002301836.1| glutathione-dependent formaldehyde dehydrogenase [Populus trichocarpa] gi|222843562|gb|EEE81109.1| glutathione-dependent formaldehyde dehydrogenase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/369 (92%), Positives = 355/369 (96%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
C+AAVAWE NKPLVIE+VQVAPPQAGEVR+KILF ALCHTDAYTWSGKDPEGLFPCILGH
Sbjct: 10 CRAAVAWEANKPLVIEEVQVAPPQAGEVRVKILFAALCHTDAYTWSGKDPEGLFPCILGH 69
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR ATG GVMMNDR
Sbjct: 70 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRTATGVGVMMNDR 129
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP+APL+KVCLLGCGVPTGLGAVWNT
Sbjct: 130 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPKAPLEKVCLLGCGVPTGLGAVWNT 189
Query: 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKVE GSIVA+FGLGTVGLAVAEGAK AGASR+IGIDID KKFDRAK+FGVTEFVNPKDH
Sbjct: 190 AKVEAGSIVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKFDRAKDFGVTEFVNPKDH 249
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
DKPIQQVL+DLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF
Sbjct: 250 DKPIQQVLIDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 309
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
QLVTGRVWKGTAFGGFKSRSQVP LVDKYMKKEIKVDEY+THN+TL E+N+AF +H G
Sbjct: 310 QLVTGRVWKGTAFGGFKSRSQVPMLVDKYMKKEIKVDEYITHNLTLPEMNQAFDLLHEGS 369
Query: 362 CLRCVLKMQ 370
CLRCVL MQ
Sbjct: 370 CLRCVLDMQ 378
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|325910821|dbj|BAJ83825.1| glutathione-dependent formaldehyde dehydrogenase [Epipremnum aureum] | Back alignment and taxonomy information |
|---|
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/369 (92%), Positives = 353/369 (95%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVAWE NKPL IEDV VAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH
Sbjct: 10 CKAAVAWEANKPLAIEDVLVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 69
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR ATG G+MMNDR
Sbjct: 70 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGIMMNDR 129
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP+APL+KVCLLGCGV TGLGAVWNT
Sbjct: 130 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPKAPLEKVCLLGCGVATGLGAVWNT 189
Query: 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKVE GSIVA+FGLGTVGLAVAEGAK AGASR+IGIDID KKFD AKNFGVTEFVNPKD+
Sbjct: 190 AKVEAGSIVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKFDVAKNFGVTEFVNPKDY 249
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
+KPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF
Sbjct: 250 EKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 309
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEY+THN+TLGEIN+ F +MH G
Sbjct: 310 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYITHNLTLGEINKGFDFMHEGS 369
Query: 362 CLRCVLKMQ 370
CLRCVL Q
Sbjct: 370 CLRCVLDTQ 378
|
Source: Epipremnum aureum Species: Epipremnum aureum Genus: Scindapsus Family: Araceae Order: Alismatales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|195621922|gb|ACG32791.1| alcohol dehydrogenase class 3 [Zea mays] | Back alignment and taxonomy information |
|---|
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/369 (92%), Positives = 355/369 (96%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVA+EPNKPLVIEDVQVAPPQAGEVR+KILFTALCHTD YTWSGKDPEGLFPCILGH
Sbjct: 12 CKAAVAYEPNKPLVIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGH 71
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
EAAGIVESVGEGVT+VQPGDHVIPCYQAEC+ECKFCKSGKTNLCGKVR ATG GVMMND
Sbjct: 72 EAAGIVESVGEGVTDVQPGDHVIPCYQAECKECKFCKSGKTNLCGKVRSATGVGVMMNDM 131
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
KSRFS+NGKPIYHFMGTSTFSQYTVVHDVSVAKI+PQAPLDKVCLLGCGVPTGLGAVWNT
Sbjct: 132 KSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVPTGLGAVWNT 191
Query: 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKVE GS+VAVFGLGTVGLAVAEGAKAAGASRVIGIDID KKFD AKNFGVTEFVNPK+H
Sbjct: 192 AKVESGSVVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDNKKFDVAKNFGVTEFVNPKEH 251
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
DKPIQQVLVDLTDGGVDYSFECIGNVS+MRAALECCHKGWGTSVIVGVAASGQEISTRPF
Sbjct: 252 DKPIQQVLVDLTDGGVDYSFECIGNVSIMRAALECCHKGWGTSVIVGVAASGQEISTRPF 311
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
QLVTGRVWKGTAFGGFKSR+QVPWLVDKYMKKEIKVDEY+THNM L +IN+AF +H G
Sbjct: 312 QLVTGRVWKGTAFGGFKSRTQVPWLVDKYMKKEIKVDEYITHNMNLADINDAFHLLHEGG 371
Query: 362 CLRCVLKMQ 370
CLRCVL MQ
Sbjct: 372 CLRCVLAMQ 380
|
Source: Zea mays Species: Zea mays Genus: Zea Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|194688556|gb|ACF78362.1| unknown [Zea mays] gi|194707152|gb|ACF87660.1| unknown [Zea mays] gi|194707766|gb|ACF87967.1| unknown [Zea mays] gi|413939458|gb|AFW74009.1| putative alcohol dehydrogenase superfamily protein [Zea mays] | Back alignment and taxonomy information |
|---|
Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/369 (92%), Positives = 355/369 (96%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVA+EPNKPLVIEDVQVAPPQAGEVR+KILFTALCHTD YTWSGKDPEGLFPCILGH
Sbjct: 12 CKAAVAYEPNKPLVIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGH 71
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
EAAGIVESVGEGVT+VQPGDHVIPCYQAEC+ECKFCKSGKTNLCGKVR ATG GVMMND
Sbjct: 72 EAAGIVESVGEGVTDVQPGDHVIPCYQAECKECKFCKSGKTNLCGKVRSATGVGVMMNDM 131
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
KSRFS+NGKPIYHFMGTSTFSQYTVVHDVSVAKI+PQAPLDKVCLLGCGVPTGLGAVWNT
Sbjct: 132 KSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVPTGLGAVWNT 191
Query: 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKVE GS+VAVFGLGTVGLAVAEGAKAAGASRVIGIDID KKFD AKNFGVTEFVNPK+H
Sbjct: 192 AKVESGSVVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDNKKFDVAKNFGVTEFVNPKEH 251
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI+TRPF
Sbjct: 252 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIATRPF 311
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
QLVTGRVWKGTAFGGFKSR+QVPWLVDKYMKKEIKVDEY+THNM L +IN+AF +H G
Sbjct: 312 QLVTGRVWKGTAFGGFKSRTQVPWLVDKYMKKEIKVDEYITHNMNLADINDAFHLLHEGG 371
Query: 362 CLRCVLKMQ 370
CLRCVL MQ
Sbjct: 372 CLRCVLAMQ 380
|
Source: Zea mays Species: Zea mays Genus: Zea Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|195625730|gb|ACG34695.1| alcohol dehydrogenase class 3 [Zea mays] | Back alignment and taxonomy information |
|---|
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/369 (92%), Positives = 354/369 (95%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVA+EPNKPLVIEDVQVAPPQAGEVR+KILFTALCHTD YTWSGKDPEGLFPCILGH
Sbjct: 12 CKAAVAYEPNKPLVIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGH 71
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
EAAGIVESVGEGVT+VQPGDHVIPCYQAEC+ECKFCKSGKTNLCGKVR ATG GVMMND
Sbjct: 72 EAAGIVESVGEGVTDVQPGDHVIPCYQAECKECKFCKSGKTNLCGKVRSATGVGVMMNDM 131
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
KSRFS+NGKPIYHFMGTSTFSQYTVVHDVSVAKI+PQAPLDKVCLLGCGVPTGLGAVWNT
Sbjct: 132 KSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVPTGLGAVWNT 191
Query: 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKVE GS+VAVFGLGTVGLAVAEGAKAAGASRVI IDID KKFD AKNFGVTEFVNPK+H
Sbjct: 192 AKVESGSVVAVFGLGTVGLAVAEGAKAAGASRVISIDIDNKKFDVAKNFGVTEFVNPKEH 251
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI+TRPF
Sbjct: 252 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIATRPF 311
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
QLVTGRVWKGTAFGGFKSR+QVPWLVDKYMKKEIKVDEY+THNM L +IN+AF +H G
Sbjct: 312 QLVTGRVWKGTAFGGFKSRTQVPWLVDKYMKKEIKVDEYITHNMNLADINDAFHLLHEGG 371
Query: 362 CLRCVLKMQ 370
CLRCVL MQ
Sbjct: 372 CLRCVLAMQ 380
|
Source: Zea mays Species: Zea mays Genus: Zea Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 371 | ||||||
| ZFIN|ZDB-GENE-011003-1 | 376 | adh5 "alcohol dehydrogenase 5" | 0.986 | 0.973 | 0.673 | 6e-135 | |
| UNIPROTKB|P11766 | 374 | ADH5 "Alcohol dehydrogenase cl | 0.989 | 0.981 | 0.673 | 2.6e-134 | |
| UNIPROTKB|F1S0C1 | 374 | ADH5 "Uncharacterized protein" | 0.989 | 0.981 | 0.673 | 8.8e-134 | |
| UNIPROTKB|F1NI89 | 370 | ADH5 "Uncharacterized protein" | 0.986 | 0.989 | 0.683 | 1.4e-133 | |
| UNIPROTKB|F1NKS5 | 374 | ADH5 "Uncharacterized protein" | 0.986 | 0.978 | 0.683 | 1.4e-133 | |
| UNIPROTKB|F1PLM5 | 376 | F1PLM5 "Uncharacterized protei | 0.989 | 0.976 | 0.673 | 1.4e-133 | |
| UNIPROTKB|J9PA83 | 374 | ADH5 "Uncharacterized protein" | 0.989 | 0.981 | 0.673 | 1.4e-133 | |
| RGD|2292706 | 374 | Adh5 "alcohol dehydrogenase 5 | 0.989 | 0.981 | 0.676 | 6.2e-133 | |
| UNIPROTKB|P12711 | 374 | Adh5 "Alcohol dehydrogenase cl | 0.989 | 0.981 | 0.676 | 6.2e-133 | |
| MGI|MGI:87929 | 374 | Adh5 "alcohol dehydrogenase 5 | 0.989 | 0.981 | 0.673 | 2.1e-132 |
| ZFIN|ZDB-GENE-011003-1 adh5 "alcohol dehydrogenase 5" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1322 (470.4 bits), Expect = 6.0e-135, P = 6.0e-135
Identities = 247/367 (67%), Positives = 286/367 (77%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVAWE KPL IE+V+VAPP+A EVR+KI T +CHTDAYT SG DPEGLFP ILGH
Sbjct: 10 CKAAVAWEAGKPLTIEEVEVAPPKAHEVRVKIHATGVCHTDAYTLSGSDPEGLFPVILGH 69
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
E AG VESVGEGVT+ +PGD VIP Y +C ECKFCK+ KTNLC K+R G G +M D
Sbjct: 70 EGAGTVESVGEGVTKFKPGDTVIPLYVPQCGECKFCKNPKTNLCQKIRVTQGQG-LMPDN 128
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
SRF+ GK ++HFMGTSTFS+YTVV ++S+AK+D APLDKVCLLGCG+ TG GA NT
Sbjct: 129 TSRFTCKGKQLFHFMGTSTFSEYTVVAEISLAKVDEHAPLDKVCLLGCGISTGYGAAINT 188
Query: 182 AKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKVE GS AVFGLG V +R+IGID++P KF+ AK FG TEFVNPKDH
Sbjct: 189 AKVEAGSTCAVFGLGAVGLAVVMGCKSAGATRIIGIDVNPDKFEIAKKFGATEFVNPKDH 248
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
KPIQ+VLV+LTDGGVDYSFECIGNV +MRAALE CHKGWGTSVI+GVA +GQEISTRPF
Sbjct: 249 SKPIQEVLVELTDGGVDYSFECIGNVGIMRAALEACHKGWGTSVIIGVAGAGQEISTRPF 308
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
QLVTGR WKGTAFGG+KS VP LV+ YM K++ VDE+VTH + +INEAF MH G
Sbjct: 309 QLVTGRTWKGTAFGGWKSVESVPKLVNDYMNKKLMVDEFVTHTLPFAQINEAFDLMHAGK 368
Query: 362 CLRCVLK 368
+R VL+
Sbjct: 369 SIRAVLQ 375
|
|
| UNIPROTKB|P11766 ADH5 "Alcohol dehydrogenase class-3" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1316 (468.3 bits), Expect = 2.6e-134, P = 2.6e-134
Identities = 248/368 (67%), Positives = 290/368 (78%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVAWE KPL IE+++VAPP+A EVRIKI+ TA+CHTDAYT SG DPEG FP ILGH
Sbjct: 8 CKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGH 67
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
E AGIVESVGEGVT+++ GD VIP Y +C ECKFC + KTNLC K+R G G +M D
Sbjct: 68 EGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-LMPDG 126
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
SRF+ GK I H+MGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCG+ TG GA NT
Sbjct: 127 TSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNT 186
Query: 182 AKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AK+EPGS+ AVFGLG V SR+IG+DI+ KF RAK FG TE +NP+D
Sbjct: 187 AKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDF 246
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
KPIQ+VL+++TDGGVDYSFECIGNV VMRAALE CHKGWG SV+VGVAASG+EI+TRPF
Sbjct: 247 SKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPF 306
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
QLVTGR WKGTAFGG+KS VP LV +YM K+IKVDE+VTHN++ EIN+AF MH G
Sbjct: 307 QLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGK 366
Query: 362 CLRCVLKM 369
+R V+K+
Sbjct: 367 SIRTVVKI 374
|
|
| UNIPROTKB|F1S0C1 ADH5 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1311 (466.6 bits), Expect = 8.8e-134, P = 8.8e-134
Identities = 248/368 (67%), Positives = 288/368 (78%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVAWE KPL IE+++VAPP+A EVRIKI+ TA+CHTDAYT SG DPEG FP ILGH
Sbjct: 8 CKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPVILGH 67
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
E AGIVESVGEGVT+++ GD VIP Y +C ECKFC + KTNLC K+R G G +M D
Sbjct: 68 EGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-LMPDG 126
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
SRF+ GK I H+MGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCGV TG GA NT
Sbjct: 127 TSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYGAAVNT 186
Query: 182 AKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKVEPGS AVFGLG V SR+IG+DI+ KF RAK FG +E +NP+D
Sbjct: 187 AKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGASECINPQDF 246
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
KPIQ+VL+++TDGGVDYSFECIGNV VMRAALE CHKGWG SV+VGVAASG+EI+TRPF
Sbjct: 247 SKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPF 306
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
QLVTGR WKGTAFGG+KS +P LV +YM K+IKVDE+VTHN+ +INEAF MH G
Sbjct: 307 QLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAFELMHAGK 366
Query: 362 CLRCVLKM 369
+R V+K+
Sbjct: 367 SIRTVIKL 374
|
|
| UNIPROTKB|F1NI89 ADH5 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1309 (465.8 bits), Expect = 1.4e-133, P = 1.4e-133
Identities = 251/367 (68%), Positives = 286/367 (77%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVAWE KPL IE+V+VAPP+A EVRIKI+ TALCHTDAYT SG DPEG FP ILGH
Sbjct: 4 CKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIVATALCHTDAYTLSGADPEGCFPVILGH 63
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
E AGIVESVGEGVT+V+PGD VIP Y +C ECK+CK+ KTNLC K+R G G +M D
Sbjct: 64 EGAGIVESVGEGVTKVKPGDTVIPLYIPQCGECKYCKNPKTNLCQKIRFTQGKG-LMPDG 122
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
RF+ GK IYHFMGTSTFS+YTVV D+SVAKIDP AP DKVCLLGCG+ TG GA NT
Sbjct: 123 TIRFTCKGKQIYHFMGTSTFSEYTVVADISVAKIDPAAPFDKVCLLGCGISTGYGAAVNT 182
Query: 182 AKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKVEPGS AVFGLG V SR+IGIDI+ + +AK FG E ++P+D
Sbjct: 183 AKVEPGSTCAVFGLGGVGLATVMGCKAAGASRIIGIDINKNTYAKAKEFGAAECISPQDF 242
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
+KPIQ+VLV++TDGGVDYSFECIGNV VMRAALE CHKGWG SVIVGVAA+GQEISTRPF
Sbjct: 243 EKPIQEVLVEMTDGGVDYSFECIGNVGVMRAALEACHKGWGVSVIVGVAAAGQEISTRPF 302
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
QLVTGR WKGTAFGG+KS VP LV+ YM K+IKVDE+VTH + +INEAF +H G
Sbjct: 303 QLVTGRTWKGTAFGGWKSVDSVPKLVNDYMAKKIKVDEFVTHTLPFDKINEAFDLLHKGK 362
Query: 362 CLRCVLK 368
+R VLK
Sbjct: 363 SIRTVLK 369
|
|
| UNIPROTKB|F1NKS5 ADH5 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1309 (465.8 bits), Expect = 1.4e-133, P = 1.4e-133
Identities = 251/367 (68%), Positives = 286/367 (77%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVAWE KPL IE+V+VAPP+A EVRIKI+ TALCHTDAYT SG DPEG FP ILGH
Sbjct: 8 CKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIVATALCHTDAYTLSGADPEGCFPVILGH 67
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
E AGIVESVGEGVT+V+PGD VIP Y +C ECK+CK+ KTNLC K+R G G +M D
Sbjct: 68 EGAGIVESVGEGVTKVKPGDTVIPLYIPQCGECKYCKNPKTNLCQKIRVTQGKG-LMPDG 126
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
RF+ GK IYHFMGTSTFS+YTVV D+SVAKIDP AP DKVCLLGCG+ TG GA NT
Sbjct: 127 TIRFTCKGKQIYHFMGTSTFSEYTVVADISVAKIDPAAPFDKVCLLGCGISTGYGAAVNT 186
Query: 182 AKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKVEPGS AVFGLG V SR+IGIDI+ + +AK FG E ++P+D
Sbjct: 187 AKVEPGSTCAVFGLGGVGLATVMGCKAAGASRIIGIDINKNTYAKAKEFGAAECISPQDF 246
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
+KPIQ+VLV++TDGGVDYSFECIGNV VMRAALE CHKGWG SVIVGVAA+GQEISTRPF
Sbjct: 247 EKPIQEVLVEMTDGGVDYSFECIGNVGVMRAALEACHKGWGVSVIVGVAAAGQEISTRPF 306
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
QLVTGR WKGTAFGG+KS VP LV+ YM K+IKVDE+VTH + +INEAF +H G
Sbjct: 307 QLVTGRTWKGTAFGGWKSVDSVPKLVNDYMAKKIKVDEFVTHTLPFDKINEAFDLLHKGK 366
Query: 362 CLRCVLK 368
+R VLK
Sbjct: 367 SIRTVLK 373
|
|
| UNIPROTKB|F1PLM5 F1PLM5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1309 (465.8 bits), Expect = 1.4e-133, P = 1.4e-133
Identities = 248/368 (67%), Positives = 290/368 (78%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVAWE KPL IE+V+VAPP+A EVRIKI+ TA+CHTDAYT SG DPEG FP ILGH
Sbjct: 10 CKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPVILGH 69
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
E AGIVESVGEGVT+++ GD VIP Y +C ECKFC + KTNLC K+R G G +M D
Sbjct: 70 EGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-LMPDG 128
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
SRF+ GK I H+MGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCG+ TG GA NT
Sbjct: 129 TSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAALNT 188
Query: 182 AKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKVEPGS AVFGLG V SR+IG+DI+ KF RAK FG +E +NP+D
Sbjct: 189 AKVEPGSTCAVFGLGGVGLATIMGCKVAGASRIIGVDINKDKFSRAKEFGASECINPQDF 248
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
KPIQ+VL+++TDGGVDYSFECIGNV VMRAALE CHKGWG SVIVGVAASG+EI+TRPF
Sbjct: 249 SKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVIVGVAASGEEIATRPF 308
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
QLVTGRVWKGTAFGG+KS VP LV +YM ++IKVDE+VTH+++ +INEAF +H G
Sbjct: 309 QLVTGRVWKGTAFGGWKSVESVPKLVSEYMSRKIKVDEFVTHSLSFDQINEAFDLLHAGK 368
Query: 362 CLRCVLKM 369
+R V+K+
Sbjct: 369 SIRTVVKL 376
|
|
| UNIPROTKB|J9PA83 ADH5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1309 (465.8 bits), Expect = 1.4e-133, P = 1.4e-133
Identities = 248/368 (67%), Positives = 290/368 (78%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVAWE KPL IE+V+VAPP+A EVRIKI+ TA+CHTDAYT SG DPEG FP ILGH
Sbjct: 8 CKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPVILGH 67
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
E AGIVESVGEGVT+++ GD VIP Y +C ECKFC + KTNLC K+R G G +M D
Sbjct: 68 EGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-LMPDG 126
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
SRF+ GK I H+MGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCG+ TG GA NT
Sbjct: 127 TSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAALNT 186
Query: 182 AKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKVEPGS AVFGLG V SR+IG+DI+ KF RAK FG +E +NP+D
Sbjct: 187 AKVEPGSTCAVFGLGGVGLATIMGCKVAGASRIIGVDINKDKFSRAKEFGASECINPQDF 246
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
KPIQ+VL+++TDGGVDYSFECIGNV VMRAALE CHKGWG SVIVGVAASG+EI+TRPF
Sbjct: 247 SKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVIVGVAASGEEIATRPF 306
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
QLVTGRVWKGTAFGG+KS VP LV +YM ++IKVDE+VTH+++ +INEAF +H G
Sbjct: 307 QLVTGRVWKGTAFGGWKSVESVPKLVSEYMSRKIKVDEFVTHSLSFDQINEAFDLLHAGK 366
Query: 362 CLRCVLKM 369
+R V+K+
Sbjct: 367 SIRTVVKL 374
|
|
| RGD|2292706 Adh5 "alcohol dehydrogenase 5 (class III), chi polypeptide" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1303 (463.7 bits), Expect = 6.2e-133, P = 6.2e-133
Identities = 249/368 (67%), Positives = 288/368 (78%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVAWE KPL IE+++VAPPQA EVRIKI+ TA+CHTDAYT SG DPEG FP ILGH
Sbjct: 8 CKAAVAWEAGKPLSIEEIEVAPPQAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGH 67
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
E AGIVESVGEGVT+++ GD VIP Y +C ECKFC + KTNLC K+R G G +M D
Sbjct: 68 EGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-LMPDG 126
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
SRF+ GKPI HFMGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCG+ TG GA NT
Sbjct: 127 TSRFTCKGKPILHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAAVNT 186
Query: 182 AKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKVEPGS AVFGLG V SR+IGIDI+ KF +AK FG TE +NP+D
Sbjct: 187 AKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGIDINKDKFAKAKEFGATECINPQDF 246
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
K IQ+VL+++TDGGVD+SFECIGNV VMR+ALE HKGWG SV+VGVAASG+EISTRPF
Sbjct: 247 SKSIQEVLIEMTDGGVDFSFECIGNVKVMRSALEAAHKGWGVSVVVGVAASGEEISTRPF 306
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
QLVTGR WKGTAFGG+KS VP LV +YM K+IKVDE+VT N++ +IN+AF MH G+
Sbjct: 307 QLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTGNLSFDQINKAFDLMHSGN 366
Query: 362 CLRCVLKM 369
+R VLKM
Sbjct: 367 SIRTVLKM 374
|
|
| UNIPROTKB|P12711 Adh5 "Alcohol dehydrogenase class-3" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1303 (463.7 bits), Expect = 6.2e-133, P = 6.2e-133
Identities = 249/368 (67%), Positives = 288/368 (78%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVAWE KPL IE+++VAPPQA EVRIKI+ TA+CHTDAYT SG DPEG FP ILGH
Sbjct: 8 CKAAVAWEAGKPLSIEEIEVAPPQAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGH 67
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
E AGIVESVGEGVT+++ GD VIP Y +C ECKFC + KTNLC K+R G G +M D
Sbjct: 68 EGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-LMPDG 126
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
SRF+ GKPI HFMGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCG+ TG GA NT
Sbjct: 127 TSRFTCKGKPILHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAAVNT 186
Query: 182 AKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKVEPGS AVFGLG V SR+IGIDI+ KF +AK FG TE +NP+D
Sbjct: 187 AKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGIDINKDKFAKAKEFGATECINPQDF 246
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
K IQ+VL+++TDGGVD+SFECIGNV VMR+ALE HKGWG SV+VGVAASG+EISTRPF
Sbjct: 247 SKSIQEVLIEMTDGGVDFSFECIGNVKVMRSALEAAHKGWGVSVVVGVAASGEEISTRPF 306
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
QLVTGR WKGTAFGG+KS VP LV +YM K+IKVDE+VT N++ +IN+AF MH G+
Sbjct: 307 QLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTGNLSFDQINKAFDLMHSGN 366
Query: 362 CLRCVLKM 369
+R VLKM
Sbjct: 367 SIRTVLKM 374
|
|
| MGI|MGI:87929 Adh5 "alcohol dehydrogenase 5 (class III), chi polypeptide" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1298 (462.0 bits), Expect = 2.1e-132, P = 2.1e-132
Identities = 248/368 (67%), Positives = 288/368 (78%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVAWE KPL IE+++VAPP+A EVRIKIL TA+CHTDAYT SG DPEG FP ILGH
Sbjct: 8 CKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKILATAVCHTDAYTLSGADPEGCFPVILGH 67
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
E AGIVESVGEGVT+++ GD VIP Y +C ECKFC + KTNLC K+R G G +M D
Sbjct: 68 EGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-LMPDG 126
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
SRF+ GK ++HFMGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCG+ TG GA NT
Sbjct: 127 TSRFTCKGKSVFHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAAVNT 186
Query: 182 AKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKVEPGS AVFGLG V SR+IGIDI+ KF +AK FG +E ++P+D
Sbjct: 187 AKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGIDINKDKFAKAKEFGASECISPQDF 246
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
K IQ+VLV++TDGGVDYSFECIGNV VMR+ALE HKGWG SV+VGVAASG+EISTRPF
Sbjct: 247 SKSIQEVLVEMTDGGVDYSFECIGNVKVMRSALEAAHKGWGVSVVVGVAASGEEISTRPF 306
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
QLVTGR WKGTAFGG+KS VP LV +YM K+IKVDE+VT N++ +IN+AF MH GD
Sbjct: 307 QLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTGNLSFDQINQAFDLMHSGD 366
Query: 362 CLRCVLKM 369
+R VLKM
Sbjct: 367 SIRTVLKM 374
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q1RFI7 | FRMA_ECOUT | 1, ., 1, ., 1, ., - | 0.6311 | 0.9838 | 0.9891 | yes | no |
| P80467 | ADHX_UROHA | 1, ., 1, ., 1, ., 2, 8, 4 | 0.6929 | 0.9892 | 0.9839 | N/A | no |
| Q96533 | ADHX_ARATH | 1, ., 1, ., 1, ., 2, 8, 4 | 0.9153 | 0.9865 | 0.9656 | yes | no |
| P25141 | ADH1_PETHY | 1, ., 1, ., 1, ., 1 | 0.6 | 0.9946 | 0.9659 | N/A | no |
| A7ZIA4 | FRMA_ECO24 | 1, ., 1, ., 1, ., - | 0.6338 | 0.9838 | 0.9891 | yes | no |
| P25437 | FRMA_ECOLI | 1, ., 1, ., 1, ., - | 0.6311 | 0.9838 | 0.9891 | N/A | no |
| P73138 | FRMA_SYNY3 | 1, ., 1, ., 1, ., - | 0.6438 | 0.9811 | 0.9864 | N/A | no |
| P19854 | ADHX_HORSE | 1, ., 1, ., 1, ., 2, 8, 4 | 0.6875 | 0.9892 | 0.9812 | yes | no |
| P14674 | ADH2_SOLTU | 1, ., 1, ., 1, ., 1 | 0.5918 | 0.9973 | 0.9736 | N/A | no |
| P14675 | ADH3_SOLTU | 1, ., 1, ., 1, ., 1 | 0.5918 | 0.9973 | 0.9736 | N/A | no |
| A2XAZ3 | ADHX_ORYSI | 1, ., 1, ., 1, ., 2, 8, 4 | 0.9180 | 0.9865 | 0.9606 | N/A | no |
| B1J085 | FRMA_ECOLC | 1, ., 1, ., 1, ., - | 0.6338 | 0.9838 | 0.9891 | yes | no |
| P14673 | ADH1_SOLTU | 1, ., 1, ., 1, ., 1 | 0.5945 | 0.9973 | 0.9736 | N/A | no |
| P12711 | ADHX_RAT | 1, ., 1, ., 1, ., 2, 8, 4 | 0.7010 | 0.9892 | 0.9812 | yes | no |
| Q0TKS7 | FRMA_ECOL5 | 1, ., 1, ., 1, ., - | 0.6311 | 0.9838 | 0.9891 | yes | no |
| P81601 | ADHL_GADMO | 1, ., 1, ., 1, ., 2, 8, 4 | 0.6702 | 0.9865 | 0.976 | N/A | no |
| P81600 | ADHH_GADMO | 1, ., 1, ., 1, ., 2, 8, 4 | 0.6748 | 0.9838 | 0.9733 | N/A | no |
| P93629 | ADHX_MAIZE | 1, ., 1, ., 1, ., 2, 8, 4 | 0.9186 | 0.9946 | 0.9685 | N/A | no |
| A7ZX04 | FRMA_ECOHS | 1, ., 1, ., 1, ., - | 0.6338 | 0.9838 | 0.9891 | yes | no |
| P48977 | ADH_MALDO | 1, ., 1, ., 1, ., 1 | 0.5837 | 0.9973 | 0.9736 | N/A | no |
| P00333 | ADH1_MAIZE | 1, ., 1, ., 1, ., 1 | 0.5945 | 0.9973 | 0.9762 | N/A | no |
| P28032 | ADH2_SOLLC | 1, ., 1, ., 1, ., 1 | 0.5891 | 0.9973 | 0.9736 | N/A | no |
| Q0DWH1 | ADHX_ORYSJ | 1, ., 1, ., 1, ., 2, 8, 4 | 0.9153 | 0.9865 | 0.9606 | yes | no |
| Q8X5J4 | FRMA_ECO57 | 1, ., 1, ., 1, ., - | 0.6338 | 0.9838 | 0.9891 | N/A | no |
| P80572 | ADHX_PEA | 1, ., 1, ., 1, ., 2, 8, 4 | 0.8783 | 0.9973 | 0.9788 | N/A | no |
| O19053 | ADHX_RABIT | 1, ., 1, ., 1, ., 2, 8, 4 | 0.6902 | 0.9892 | 0.9812 | yes | no |
| Q17335 | ADHX_CAEEL | 1, ., 1, ., 1, ., 2, 8, 4 | 0.6193 | 0.9919 | 0.9583 | yes | no |
| Q3ZC42 | ADHX_BOVIN | 1, ., 1, ., 1, ., 2, 8, 4 | 0.6902 | 0.9892 | 0.9812 | yes | no |
| P46415 | ADHX_DROME | 1, ., 1, ., 1, ., 2, 8, 4 | 0.6612 | 0.9865 | 0.9656 | yes | no |
| P11766 | ADHX_HUMAN | 1, ., 1, ., 1, ., 2, 8, 4 | 0.6983 | 0.9892 | 0.9812 | yes | no |
| Q75ZX4 | ADH1_ORYSI | 1, ., 1, ., 1, ., 1 | 0.6 | 0.9973 | 0.9762 | N/A | no |
| P05336 | ADH1_HORVU | 1, ., 1, ., 1, ., 1 | 0.5945 | 0.9973 | 0.9762 | N/A | no |
| P79896 | ADHX_SPAAU | 1, ., 1, ., 1, ., 2, 8, 4 | 0.6967 | 0.9838 | 0.9707 | N/A | no |
| P32771 | FADH_YEAST | 1, ., 1, ., 1, ., - | 0.6085 | 0.9973 | 0.9585 | yes | no |
| O74540 | FADH2_SCHPO | 1, ., 1, ., 1, ., - | 0.625 | 0.9892 | 0.9657 | yes | no |
| P12886 | ADH1_PEA | 1, ., 1, ., 1, ., 1 | 0.5783 | 0.9973 | 0.9736 | N/A | no |
| P13603 | ADH1_TRIRP | 1, ., 1, ., 1, ., 1 | 0.5783 | 0.9973 | 0.9736 | N/A | no |
| P17648 | ADH_FRAAN | 1, ., 1, ., 1, ., 1 | 0.5810 | 0.9973 | 0.9736 | N/A | no |
| P04707 | ADH2_MAIZE | 1, ., 1, ., 1, ., 1 | 0.5837 | 0.9973 | 0.9762 | N/A | no |
| P14219 | ADH1_PENAM | 1, ., 1, ., 1, ., 1 | 0.5945 | 0.9973 | 0.9762 | N/A | no |
| P28474 | ADHX_MOUSE | 1, ., 1, ., 1, ., 2, 8, 4 | 0.6983 | 0.9892 | 0.9812 | yes | no |
| Q54TC2 | ADHX_DICDI | 1, ., 1, ., 1, ., 2, 8, 4 | 0.6792 | 0.9892 | 0.9683 | yes | no |
| P81431 | ADHX_OCTVU | 1, ., 1, ., 1, ., 2, 8, 4 | 0.6594 | 0.9946 | 0.9761 | N/A | no |
| P80360 | ADHX_MYXGL | 1, ., 1, ., 1, ., 2, 8, 4 | 0.6385 | 0.9892 | 0.9760 | N/A | no |
| B1LIP1 | FRMA_ECOSM | 1, ., 1, ., 1, ., - | 0.6311 | 0.9838 | 0.9891 | yes | no |
| P86884 | ADHX_SCYCA | 1, ., 1, ., 1, ., 2, 8, 4 | 0.6820 | 0.9892 | 0.9760 | N/A | no |
| Q3Z550 | FRMA_SHISS | 1, ., 1, ., 1, ., - | 0.6338 | 0.9838 | 0.9891 | yes | no |
| A1A835 | FRMA_ECOK1 | 1, ., 1, ., 1, ., - | 0.6311 | 0.9838 | 0.9891 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| Sb04g037050.1 | hypothetical protein (381 aa) | ||||||||||
(Sorghum bicolor) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Dha1 | SubName- Full=Aldehyde dehydrogenase; Flags- Fragment; (510 aa) | • | 0.901 | ||||||||
| Sb09g023060.1 | hypothetical protein (610 aa) | • | 0.899 | ||||||||
| Sb08g004840.1 | hypothetical protein (488 aa) | • | 0.899 | ||||||||
| Sb05g005470.1 | hypothetical protein (478 aa) | • | 0.899 | ||||||||
| Sb04g033420.1 | hypothetical protein (486 aa) | • | 0.899 | ||||||||
| Sb03g005240.1 | hypothetical protein (592 aa) | • | 0.899 | ||||||||
| Sb02g043900.1 | hypothetical protein (529 aa) | • | 0.899 | ||||||||
| Sb01g038360.1 | hypothetical protein (610 aa) | • | 0.899 | ||||||||
| Sb03g045400.1 | hypothetical protein (285 aa) | • | • | • | • | • | 0.745 | ||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 371 | |||
| cd08300 | 368 | cd08300, alcohol_DH_class_III, class III alcohol d | 0.0 | |
| cd08301 | 369 | cd08301, alcohol_DH_plants, Plant alcohol dehydrog | 0.0 | |
| TIGR02818 | 368 | TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat | 0.0 | |
| cd08277 | 365 | cd08277, liver_alcohol_DH_like, Liver alcohol dehy | 0.0 | |
| COG1062 | 366 | COG1062, AdhC, Zn-dependent alcohol dehydrogenases | 0.0 | |
| cd08299 | 373 | cd08299, alcohol_DH_class_I_II_IV, class I, II, IV | 0.0 | |
| cd05279 | 365 | cd05279, Zn_ADH1, Liver alcohol dehydrogenase and | 1e-177 | |
| PLN02740 | 381 | PLN02740, PLN02740, Alcohol dehydrogenase-like | 1e-172 | |
| PLN02827 | 378 | PLN02827, PLN02827, Alcohol dehydrogenase-like | 1e-160 | |
| cd08279 | 363 | cd08279, Zn_ADH_class_III, Class III alcohol dehyd | 1e-137 | |
| cd08281 | 371 | cd08281, liver_ADH_like1, Zinc-dependent alcohol d | 1e-101 | |
| cd08278 | 365 | cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro | 1e-100 | |
| TIGR03989 | 369 | TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa | 1e-95 | |
| cd08263 | 367 | cd08263, Zn_ADH10, Alcohol dehydrogenases of the M | 9e-73 | |
| TIGR03451 | 358 | TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi | 7e-71 | |
| COG1064 | 339 | COG1064, AdhP, Zn-dependent alcohol dehydrogenases | 1e-64 | |
| cd05188 | 271 | cd05188, MDR, Medium chain reductase/dehydrogenase | 6e-61 | |
| COG1063 | 350 | COG1063, Tdh, Threonine dehydrogenase and related | 4e-58 | |
| cd08231 | 361 | cd08231, MDR_TM0436_like, Hypothetical enzyme TM04 | 2e-56 | |
| cd08260 | 345 | cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD | 2e-54 | |
| cd05278 | 347 | cd05278, FDH_like, Formaldehyde dehydrogenases | 5e-53 | |
| cd08234 | 334 | cd08234, threonine_DH_like, L-threonine dehydrogen | 3e-49 | |
| cd08236 | 343 | cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog | 7e-49 | |
| cd08233 | 351 | cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio | 5e-48 | |
| cd08235 | 343 | cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas | 5e-48 | |
| cd08254 | 338 | cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e | 2e-47 | |
| cd08261 | 337 | cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD | 6e-46 | |
| cd05285 | 343 | cd05285, sorbitol_DH, Sorbitol dehydrogenase | 9e-46 | |
| cd08239 | 339 | cd08239, THR_DH_like, L-threonine dehydrogenase (T | 3e-44 | |
| cd08259 | 332 | cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD | 3e-44 | |
| cd08283 | 386 | cd08283, FDH_like_1, Glutathione-dependent formald | 5e-41 | |
| cd08245 | 330 | cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD | 5e-40 | |
| cd08297 | 341 | cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA | 1e-39 | |
| cd05284 | 340 | cd05284, arabinose_DH_like, D-arabinose dehydrogen | 7e-39 | |
| cd08284 | 344 | cd08284, FDH_like_2, Glutathione-dependent formald | 3e-38 | |
| cd05281 | 341 | cd05281, TDH, Threonine dehydrogenase | 3e-36 | |
| cd08240 | 350 | cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa | 9e-36 | |
| cd08266 | 342 | cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t | 1e-35 | |
| cd08285 | 351 | cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd | 5e-35 | |
| cd08286 | 345 | cd08286, FDH_like_ADH2, formaldehyde dehydrogenase | 4e-34 | |
| cd05283 | 337 | cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA | 4e-32 | |
| cd08232 | 339 | cd08232, idonate-5-DH, L-idonate 5-dehydrogenase | 2e-31 | |
| cd08258 | 306 | cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD | 2e-30 | |
| cd08287 | 345 | cd08287, FDH_like_ADH3, formaldehyde dehydrogenase | 5e-30 | |
| PRK13771 | 334 | PRK13771, PRK13771, putative alcohol dehydrogenase | 8e-30 | |
| COG0604 | 326 | COG0604, Qor, NADPH:quinone reductase and related | 9e-28 | |
| cd08282 | 375 | cd08282, PFDH_like, Pseudomonas putida aldehyde-di | 1e-27 | |
| TIGR00692 | 340 | TIGR00692, tdh, L-threonine 3-dehydrogenase | 3e-27 | |
| cd08296 | 333 | cd08296, CAD_like, Cinnamyl alcohol dehydrogenases | 2e-26 | |
| cd08269 | 312 | cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD | 2e-26 | |
| pfam08240 | 108 | pfam08240, ADH_N, Alcohol dehydrogenase GroES-like | 3e-26 | |
| cd08298 | 329 | cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA | 3e-26 | |
| PRK05396 | 341 | PRK05396, tdh, L-threonine 3-dehydrogenase; Valida | 2e-25 | |
| pfam00107 | 131 | pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase | 2e-25 | |
| cd08265 | 384 | cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD | 7e-24 | |
| cd08249 | 339 | cd08249, enoyl_reductase_like, enoyl_reductase_lik | 1e-23 | |
| cd08255 | 277 | cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro | 2e-23 | |
| PRK09422 | 338 | PRK09422, PRK09422, ethanol-active dehydrogenase/a | 2e-23 | |
| PRK10309 | 347 | PRK10309, PRK10309, galactitol-1-phosphate dehydro | 5e-22 | |
| TIGR03201 | 349 | TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1 | 6e-21 | |
| PLN02702 | 364 | PLN02702, PLN02702, L-idonate 5-dehydrogenase | 1e-20 | |
| cd05289 | 309 | cd05289, MDR_like_2, alcohol dehydrogenase and qui | 2e-20 | |
| cd08276 | 336 | cd08276, MDR7, Medium chain dehydrogenases/reducta | 4e-20 | |
| cd08241 | 323 | cd08241, QOR1, Quinone oxidoreductase (QOR) | 1e-19 | |
| PRK10083 | 339 | PRK10083, PRK10083, putative oxidoreductase; Provi | 2e-18 | |
| TIGR02819 | 393 | TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenas | 3e-18 | |
| cd08256 | 350 | cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD | 4e-18 | |
| TIGR03366 | 280 | TIGR03366, HpnZ_proposed, putative phosphonate cat | 1e-17 | |
| cd05286 | 320 | cd05286, QOR2, Quinone oxidoreductase (QOR) | 3e-17 | |
| cd08262 | 341 | cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD | 4e-17 | |
| cd08243 | 320 | cd08243, quinone_oxidoreductase_like_1, Quinone ox | 4e-17 | |
| cd08253 | 325 | cd08253, zeta_crystallin, Zeta-crystallin with NAD | 3e-15 | |
| PLN02586 | 360 | PLN02586, PLN02586, probable cinnamyl alcohol dehy | 4e-15 | |
| cd08264 | 325 | cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t | 1e-14 | |
| cd08268 | 328 | cd08268, MDR2, Medium chain dehydrogenases/reducta | 7e-14 | |
| cd08267 | 319 | cd08267, MDR1, Medium chain dehydrogenases/reducta | 4e-13 | |
| PRK09880 | 343 | PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro | 1e-12 | |
| cd08271 | 325 | cd08271, MDR5, Medium chain dehydrogenases/reducta | 5e-12 | |
| cd08272 | 326 | cd08272, MDR6, Medium chain dehydrogenases/reducta | 1e-11 | |
| cd08242 | 319 | cd08242, MDR_like, Medium chain dehydrogenases/red | 1e-11 | |
| cd08230 | 355 | cd08230, glucose_DH, Glucose dehydrogenase | 4e-11 | |
| PLN02514 | 357 | PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase | 5e-11 | |
| cd05282 | 323 | cd05282, ETR_like, 2-enoyl thioester reductase-lik | 2e-10 | |
| cd05276 | 323 | cd05276, p53_inducible_oxidoreductase, PIG3 p53-in | 7e-10 | |
| PLN02178 | 375 | PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase | 1e-09 | |
| cd08292 | 324 | cd08292, ETR_like_2, 2-enoyl thioester reductase ( | 1e-09 | |
| PRK10754 | 327 | PRK10754, PRK10754, quinone oxidoreductase, NADPH- | 2e-09 | |
| cd08290 | 341 | cd08290, ETR, 2-enoyl thioester reductase (ETR) | 7e-09 | |
| cd05195 | 293 | cd05195, enoyl_red, enoyl reductase of polyketide | 1e-07 | |
| cd08275 | 337 | cd08275, MDR3, Medium chain dehydrogenases/reducta | 1e-07 | |
| PTZ00354 | 334 | PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi | 2e-07 | |
| COG2130 | 340 | COG2130, COG2130, Putative NADP-dependent oxidored | 2e-07 | |
| cd08252 | 336 | cd08252, AL_MDR, Arginate lyase and other MDR fami | 5e-07 | |
| TIGR02822 | 329 | TIGR02822, adh_fam_2, zinc-binding alcohol dehydro | 6e-07 | |
| cd08250 | 329 | cd08250, Mgc45594_like, Mgc45594 gene product and | 7e-07 | |
| cd05288 | 329 | cd05288, PGDH, Prostaglandin dehydrogenases | 2e-06 | |
| cd08251 | 303 | cd08251, polyketide_synthase, polyketide synthase | 5e-06 | |
| cd08246 | 393 | cd08246, crotonyl_coA_red, crotonyl-CoA reductase | 9e-06 | |
| TIGR01751 | 398 | TIGR01751, crot-CoA-red, crotonyl-CoA reductase | 2e-05 | |
| cd08273 | 331 | cd08273, MDR8, Medium chain dehydrogenases/reducta | 4e-05 | |
| smart00829 | 287 | smart00829, PKS_ER, Enoylreductase | 8e-05 | |
| TIGR02817 | 336 | TIGR02817, adh_fam_1, zinc-binding alcohol dehydro | 1e-04 | |
| cd08247 | 352 | cd08247, AST1_like, AST1 is a cytoplasmic protein | 2e-04 | |
| TIGR02824 | 325 | TIGR02824, quinone_pig3, putative NAD(P)H quinone | 3e-04 | |
| cd08244 | 324 | cd08244, MDR_enoyl_red, Possible enoyl reductase | 5e-04 | |
| pfam02254 | 116 | pfam02254, TrkA_N, TrkA-N domain | 5e-04 | |
| cd01075 | 200 | cd01075, NAD_bind_Leu_Phe_Val_DH, NAD(P) binding d | 5e-04 | |
| TIGR03026 | 409 | TIGR03026, NDP-sugDHase, nucleotide sugar dehydrog | 8e-04 | |
| TIGR01202 | 308 | TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacter | 0.002 | |
| cd08274 | 350 | cd08274, MDR9, Medium chain dehydrogenases/reducta | 0.002 | |
| COG0677 | 436 | COG0677, WecC, UDP-N-acetyl-D-mannosaminuronate de | 0.003 | |
| cd08291 | 324 | cd08291, ETR_like_1, 2-enoyl thioester reductase ( | 0.003 |
| >gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases | Back alignment and domain information |
|---|
Score = 779 bits (2013), Expect = 0.0
Identities = 287/367 (78%), Positives = 316/367 (86%), Gaps = 1/367 (0%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVAWE KPL IE+V+VAPP+AGEVRIKIL T +CHTDAYT SG DPEGLFP ILGH
Sbjct: 3 CKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGH 62
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
E AGIVESVGEGVT V+PGDHVIP Y EC ECKFCKSGKTNLC K+R G G +M D
Sbjct: 63 EGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKG-LMPDG 121
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
SRFS GKPIYHFMGTSTFS+YTVV ++SVAKI+P+APLDKVCLLGCGV TG GAV NT
Sbjct: 122 TSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVLNT 181
Query: 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKVEPGS VAVFGLG VGLAV +GAKAAGASR+IGIDI+P KF+ AK FG T+ VNPKDH
Sbjct: 182 AKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKDH 241
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
DKPIQQVLV++TDGGVDY+FECIGNV VMRAALE CHKGWGTSVI+GVAA+GQEISTRPF
Sbjct: 242 DKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPF 301
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
QLVTGRVWKGTAFGG+KSRSQVP LV+ YMK +IKVDE++TH M L EINEAF MH G
Sbjct: 302 QLVTGRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGK 361
Query: 362 CLRCVLK 368
+R V+K
Sbjct: 362 SIRTVVK 368
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368 |
| >gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 644 bits (1664), Expect = 0.0
Identities = 237/366 (64%), Positives = 292/366 (79%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVAWE KPLVIE+V+VAPPQA EVRIKIL T+LCHTD Y W K LFP ILGH
Sbjct: 3 CKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGH 62
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
EAAGIVESVGEGVT+++PGDHV+P + EC+EC+ CKS K+N+C +R T GVM+ND
Sbjct: 63 EAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDG 122
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
KSRFSINGKPIYHF+GTSTFS+YTVVH VAKI+P+APLDKVCLL CGV TGLGA WN
Sbjct: 123 KSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAWNV 182
Query: 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKV+ GS VA+FGLG VGLAVAEGA+ GASR+IG+D++P KF++AK FGVTEFVNPKDH
Sbjct: 183 AKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPKDH 242
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
DKP+Q+V+ ++T GGVDYSFEC GN+ M +A EC H GWG +V++GV ST P
Sbjct: 243 DKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPM 302
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
L+ GR KGT FGG+K ++ +P LV+KYMKKE+++++++TH + EIN+AF + G+
Sbjct: 303 NLLNGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGE 362
Query: 362 CLRCVL 367
CLRC+L
Sbjct: 363 CLRCIL 368
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369 |
| >gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 587 bits (1514), Expect = 0.0
Identities = 243/367 (66%), Positives = 297/367 (80%), Gaps = 1/367 (0%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 62
+AAVAW +PL IE+V V PQ GEV ++I+ T +CHTDA+T SG DPEG+FP ILGHE
Sbjct: 3 RAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHE 62
Query: 63 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRK 122
AGIVE+VGEGVT V+ GDHVIP Y AEC ECKFC SGKTNLC VR G G+M D
Sbjct: 63 GAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLM-PDGT 121
Query: 123 SRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTA 182
SRFS +G+PIYH+MG STFS+YTVV ++S+AKI+P APL++VCLLGCGV TG+GAV NTA
Sbjct: 122 SRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTA 181
Query: 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD 242
KVE G VAVFGLG +GL+V +GA+ A ASR+I IDI+P KF+ AK G T+ VNP D+D
Sbjct: 182 KVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDYD 241
Query: 243 KPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ 302
KPIQ+V+V++TDGGVDYSFECIGNV+VMRAALECCHKGWG S+I+GVA +GQEISTRPFQ
Sbjct: 242 KPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQ 301
Query: 303 LVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDC 362
LVTGRVW+G+AFGG K R+++P +V++YMK EI +D++VTH M L +INEAF MH G
Sbjct: 302 LVTGRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS 361
Query: 363 LRCVLKM 369
+R V+
Sbjct: 362 IRTVIHY 368
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368 |
| >gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 568 bits (1467), Expect = 0.0
Identities = 228/367 (62%), Positives = 272/367 (74%), Gaps = 4/367 (1%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVAWE KPLVIE+++VAPP+A EVRIK+L T++CHTD G LFP ILGH
Sbjct: 3 CKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGF-KATLFPVILGH 61
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
E AGIVESVGEGVT ++PGD VIP + +C EC C+SGKTNLC K R A +G +M D
Sbjct: 62 EGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYR-ANESG-LMPDG 119
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
SRF+ GK IYHF+GTSTFSQYTVV + VAKIDP APL+ VCLLGCG TG GA WNT
Sbjct: 120 TSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNT 179
Query: 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKVEPGS VAVFGLG VGL+ GAK AGASR+IG+DI+ KF++AK FG T+F+NPKD
Sbjct: 180 AKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKDS 239
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
DKP+ +V+ ++T GGVDYSFEC GN +M ALE GWG SV+VGV G E+S RPF
Sbjct: 240 DKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPP-GAELSIRPF 298
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
QL+ GR WKG+ FGGFKSRS VP LV KYM K+ +DE +TH + EIN+ F M G+
Sbjct: 299 QLILGRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGE 358
Query: 362 CLRCVLK 368
C+R V+
Sbjct: 359 CIRTVIT 365
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365 |
| >gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 553 bits (1427), Expect = 0.0
Identities = 227/368 (61%), Positives = 279/368 (75%), Gaps = 4/368 (1%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
+AAVA E KPL IE+V + PP+AGEV ++I T +CHTDA+T SG DPEG FP +LGH
Sbjct: 3 TRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGH 61
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
E AGIVE+VGEGVT V+PGDHVI + EC +CKFC SGK NLC +R G G M D
Sbjct: 62 EGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMP-DG 120
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
+R S NG P+YH++G STF++YTVVH++S+ KIDP APL+K CLLGCGV TG+GAV NT
Sbjct: 121 TTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNT 180
Query: 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKVEPG VAVFGLG VGLA +GAKAAGA R+I +DI+P+K + AK FG T FVNPK+
Sbjct: 181 AKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKEV 240
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
D + + +V+LTDGG DY+FEC+GNV VMR ALE H+ GTSVI+GVA +GQEISTRPF
Sbjct: 241 D-DVVEAIVELTDGGADYAFECVGNVEVMRQALEATHR-GGTSVIIGVAGAGQEISTRPF 298
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
QLVTGRVWKG+AFGG + RS +P LVD YM ++ +D VTH + L +INEAF MH G
Sbjct: 299 QLVTGRVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGK 358
Query: 362 CLRCVLKM 369
+R V++
Sbjct: 359 SIRSVIRF 366
|
Length = 366 |
| >gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases | Back alignment and domain information |
|---|
Score = 535 bits (1381), Expect = 0.0
Identities = 207/366 (56%), Positives = 260/366 (71%), Gaps = 2/366 (0%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAV WEP KP IE+++VAPP+A EVRIKI+ T +C +D + SGK FP ILGH
Sbjct: 8 CKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGH 66
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
EAAGIVESVGEGVT V+PGD VIP + +C +C+ C + ++NLC K G+M D
Sbjct: 67 EAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQ-DG 125
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
SRF+ GKPI+HF+GTSTFS+YTVV +++VAKID APL+KVCL+GCG TG GA NT
Sbjct: 126 TSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNT 185
Query: 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKV PGS AVFGLG VGL+ G KAAGASR+I +DI+ KF +AK G TE +NP+D+
Sbjct: 186 AKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQDY 245
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
KPIQ+VL ++TDGGVD+SFE IG + M+AAL CH+G+G SVIVGV S Q +S P
Sbjct: 246 KKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPM 305
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
L+TGR WKG FGG+KS+ VP LV YM K+ +D +TH + +INE F + G
Sbjct: 306 LLLTGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGK 365
Query: 362 CLRCVL 367
+R VL
Sbjct: 366 SIRTVL 371
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373 |
| >gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Score = 495 bits (1277), Expect = e-177
Identities = 205/367 (55%), Positives = 262/367 (71%), Gaps = 2/367 (0%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAV WE KPL IE+++VAPP+AGEVRIK++ T +CHTD + GK P P ILGH
Sbjct: 1 CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGH 59
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
E AGIVES+G GVT ++PGD VIP + +C +CK C + + NLC K RG G G+M D
Sbjct: 60 EGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMS-DG 118
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
SRF+ GKPI+HF+GTSTF++YTVV ++S+AKIDP APL+KVCL+GCG TG GA NT
Sbjct: 119 TSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNT 178
Query: 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKV PGS AVFGLG VGL+V G KAAGASR+I +DI+ KF++AK G TE +NP+D
Sbjct: 179 AKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQ 238
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
DKPI +VL ++TDGGVDY+FE IG+ ++ AL+ G GTSV+VGV SG E + P
Sbjct: 239 DKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPN 298
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
L+TGR KGT FGG+KS+ VP LV Y +K+ +DE +TH + EIN+ F M G+
Sbjct: 299 DLLTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGE 358
Query: 362 CLRCVLK 368
+R +L
Sbjct: 359 SIRTILT 365
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365 |
| >gnl|CDD|178341 PLN02740, PLN02740, Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Score = 484 bits (1247), Expect = e-172
Identities = 197/371 (53%), Positives = 268/371 (72%), Gaps = 3/371 (0%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK-DPEGLFPCILG 60
CKAAVAW P +PLV+E+++V PPQ EVRIKIL+T++CHTD W G+ + + +P ILG
Sbjct: 11 CKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILG 70
Query: 61 HEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 120
HEAAGIVESVGEGV +++ GDHVIP + EC +C++CK KTNLC R VM+ND
Sbjct: 71 HEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVND 130
Query: 121 RKSRFSI--NGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 178
K+RFS +G+PIYHF+ TSTF++YTV+ V KIDP APL K+ LL CGV TG+GA
Sbjct: 131 GKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPLKKMSLLSCGVSTGVGAA 190
Query: 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238
WNTA V+ GS VA+FGLG VGLAVAEGA+A GAS++IG+DI+P+KF++ K G+T+F+NP
Sbjct: 191 WNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDFINP 250
Query: 239 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIST 298
KD DKP+ + + ++T GGVDYSFEC GNV V+R A H GWG +V++G+ + + +
Sbjct: 251 KDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPL 310
Query: 299 RPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMH 358
P +L GR G+ FG FK +SQ+P L + M+ + +D ++TH + +INEAF+ +
Sbjct: 311 HPMELFDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLE 370
Query: 359 GGDCLRCVLKM 369
G LRC+L +
Sbjct: 371 DGKALRCLLHL 381
|
Length = 381 |
| >gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Score = 453 bits (1168), Expect = e-160
Identities = 198/368 (53%), Positives = 264/368 (71%), Gaps = 4/368 (1%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
C+AAVAW + LV+E+V+V+PPQ E+RIK++ T+LC +D W + LFP I GH
Sbjct: 13 CRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQ---ALFPRIFGH 69
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
EA+GIVES+GEGVTE + GDHV+ + EC C+ C SGK+N+C +V G GVM +D+
Sbjct: 70 EASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMC-QVLGLERKGVMHSDQ 128
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
K+RFSI GKP+YH+ S+FS+YTVVH K+DP APL K+CLL CGV GLGA WN
Sbjct: 129 KTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNV 188
Query: 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
A V GS V +FGLGTVGL+VA+GAK GAS++IG+DI+P+K ++AK FGVT+F+NP D
Sbjct: 189 ADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPNDL 248
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
+PIQQV+ +T GG DYSFEC+G+ + AL+ C GWG +V +GV + E+S
Sbjct: 249 SEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYG 308
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
++GR KG+ FGG+K +S +P LVDKYM KEI +DE++THN++ EIN+AF M G
Sbjct: 309 LFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGK 368
Query: 362 CLRCVLKM 369
CLRCV+ M
Sbjct: 369 CLRCVIHM 376
|
Length = 378 |
| >gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 395 bits (1017), Expect = e-137
Identities = 163/367 (44%), Positives = 223/367 (60%), Gaps = 8/367 (2%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 62
+AAV E KPL IE+V++ P GEV ++I LCH+D + +G P L P +LGHE
Sbjct: 2 RAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLPAPL-PAVLGHE 60
Query: 63 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRK 122
AG+VE VG GVT V+PGDHV+ + C C++C G+ NLC GA G + D
Sbjct: 61 GAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCD--LGAGILGGQLPDGT 118
Query: 123 SRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTA 182
RF+ +G+P+ G TF++YTVV + SV KID PLD+ LLGCGV TG+GAV NTA
Sbjct: 119 RRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTA 178
Query: 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD 242
+V PG VAV G G VGL +GA+ AGASR+I +D P+K + A+ FG T VN + D
Sbjct: 179 RVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASEDD 238
Query: 243 KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
++ V DLTDG G DY+FE +G + +R AL KG GT+V+VG+ G+ +S
Sbjct: 239 -AVEAV-RDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPAL 295
Query: 302 QLV-TGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGG 360
+L + + +G+ +G R +P L+D Y +K+DE VT +L EINEAF M G
Sbjct: 296 ELFLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAG 355
Query: 361 DCLRCVL 367
+ R V+
Sbjct: 356 ENARGVI 362
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363 |
| >gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Score = 303 bits (777), Expect = e-101
Identities = 149/358 (41%), Positives = 204/358 (56%), Gaps = 6/358 (1%)
Query: 12 KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVG 71
+PLVIE+V++ PP GEV +KI LCH+D +G P L P LGHEAAG+V VG
Sbjct: 19 RPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPRPL-PMALGHEAAGVVVEVG 77
Query: 72 EGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKP 131
EGVT+++ GDHV+ + C C+ C G+ LC A GAG +++ + R + G
Sbjct: 78 EGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGR-RLRLRGGE 136
Query: 132 IYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVA 191
I H +G S F++Y VV SV KID PL+ L GC V TG+GAV NTA V PG VA
Sbjct: 137 INHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVA 196
Query: 192 VFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVD 251
V GLG VGL+ GA AAGAS+V+ +D++ K A+ G T VN D + ++QV +
Sbjct: 197 VVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGDPN-AVEQV-RE 254
Query: 252 LTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWK 310
LT GGVDY+FE G+V + A E +G GT+V G+ +S LV R K
Sbjct: 255 LTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVAEERTLK 313
Query: 311 GTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 368
G+ G R +P + Y+ + VD+ +TH + L EINE F + G+ +R V+
Sbjct: 314 GSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL 371
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371 |
| >gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 300 bits (770), Expect = e-100
Identities = 133/369 (36%), Positives = 197/369 (53%), Gaps = 8/369 (2%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
AAV EP P V+EDV++ P+ EV ++I+ T +CHTD G P P +LGH
Sbjct: 3 TTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGH 61
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
E AG+VE+VG VT ++PGDHV+ + A C EC C SG C +G +
Sbjct: 62 EGAGVVEAVGSAVTGLKPGDHVVLSF-ASCGECANCLSGHPAYCENFFPLNFSGRRPDGS 120
Query: 122 KSRFSINGKPIY-HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN 180
+G P++ HF G S+F+ Y VVH+ +V K+D PL+ + LGCG+ TG GAV N
Sbjct: 121 TPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAGAVLN 180
Query: 181 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240
K PGS +AVFG G VGLA AK AG + +I +DI + + AK G T +NPK+
Sbjct: 181 VLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINPKE 240
Query: 241 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP 300
D + + ++T GGVDY+ + G +V+ A++ GT +VG G E++
Sbjct: 241 ED--LVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTLDV 297
Query: 301 FQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHG 359
L+ G+ +G G + +P L++ Y + + D+ VT +IN+A
Sbjct: 298 NDLLVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLVTF-YPFEDINQAIADSES 356
Query: 360 GDCLRCVLK 368
G ++ VL+
Sbjct: 357 GKVIKPVLR 365
|
Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365 |
| >gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family | Back alignment and domain information |
|---|
Score = 289 bits (741), Expect = 1e-95
Identities = 142/372 (38%), Positives = 208/372 (55%), Gaps = 12/372 (3%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 62
KAAV W P +P +E++++ P+AGEV +K++ + LCH+D + +G P +P + GHE
Sbjct: 3 KAAVLWGPGQPWEVEEIELDDPKAGEVLVKLVASGLCHSDEHLVTGDLPMPRYPILGGHE 62
Query: 63 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG-AGVMMNDR 121
AG+V VG GVT V+PGDHV+ + C C++C +G NLC GA G ++D
Sbjct: 63 GAGVVTKVGPGVTGVKPGDHVVLSFIPACGRCRWCSTGLQNLCD--LGAALLTGSQISDG 120
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
RF +G+ + TFS+YTVV + SV KID PLDK CL+GCGVPTG G+ N
Sbjct: 121 TYRFHADGQDVGQMCLLGTFSEYTVVPEASVVKIDDDIPLDKACLVGCGVPTGWGSAVNI 180
Query: 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
A V PG V V G+G VG+ +GA AGA +VI +D K ++A FG T
Sbjct: 181 ADVRPGDTVVVMGIGGVGINAVQGAAVAGARKVIAVDPVEFKREQALKFGATHAFA--SM 238
Query: 242 DKPIQQVLVDLTDG-GVDYSFECIGNV--SVMRAALECCHKGWGTSVIVGVAASGQE-IS 297
++ +Q V +LT+G G D + +G V + AL KG G V+ G+ +
Sbjct: 239 EEAVQLVR-ELTNGQGADKTIITVGEVDGEHIAEALSATRKG-GRVVVTGLGPMADVDVK 296
Query: 298 TRPFQLV-TGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRY 356
F+L + +GT FGG R+ +P L++ Y ++K+DE +T TL +INE ++
Sbjct: 297 VNLFELTLLQKELQGTLFGGANPRADIPRLLELYRAGKLKLDELITRTYTLDQINEGYQD 356
Query: 357 MHGGDCLRCVLK 368
M G +R V+
Sbjct: 357 MLDGKNIRGVIV 368
|
This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369 |
| >gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 230 bits (588), Expect = 9e-73
Identities = 115/363 (31%), Positives = 175/363 (48%), Gaps = 9/363 (2%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 62
KAAV PN PL IE++ V P+ GE+ I++ +CH+D + G+ P P +LGHE
Sbjct: 2 KAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELP-FPPPFVLGHE 60
Query: 63 AAGIVESVGEGVT---EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 119
+G V VG V + GD V+ + C +C++C GK NLC +
Sbjct: 61 ISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLY 120
Query: 120 DRKSR-FSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 178
D +R F ++G P+Y + ++Y VV ++A + + +LGC T GA+
Sbjct: 121 DGTTRLFRLDGGPVYMYSM-GGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGAL 179
Query: 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238
+ A V PG VAV G+G VG + + AKA GAS +I +D+ +K +AK G T VN
Sbjct: 180 KHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNA 239
Query: 239 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIST 298
D + + GVD E +G + AL+ G G +V+VG+A G
Sbjct: 240 AKED-AVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATAEI 297
Query: 299 RPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMH 358
+LV + ++G + R +P LV ++ + VTH L EINEA+ +
Sbjct: 298 PITRLVRRGIKIIGSYGA-RPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLR 356
Query: 359 GGD 361
G
Sbjct: 357 KGL 359
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367 |
| >gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase | Back alignment and domain information |
|---|
Score = 225 bits (575), Expect = 7e-71
Identities = 136/369 (36%), Positives = 189/369 (51%), Gaps = 19/369 (5%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTD-AYTWSGKDPEGLFPCILGH 61
+ +A P+ +E + V P GEV + I +CHTD Y G + E FP +LGH
Sbjct: 3 RGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGINDE--FPFLLGH 60
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
EAAG+VE+VGEGVT+V PGD+V+ ++A C +C+ CK G+ C AT + +
Sbjct: 61 EAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTD-- 118
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
G + +G F++ T+VH K+DP A LLGCGV GLGA NT
Sbjct: 119 -------GTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNT 171
Query: 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
V+ G VAV G G VG A GA AGAS++I +DID +K + A+ FG T VN
Sbjct: 172 GGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGT 231
Query: 242 DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP 300
D P++ + LT G G D + +G + A GT V+VGV + P
Sbjct: 232 D-PVEAIR-ALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMTLEL-P 287
Query: 301 FQLVTGR--VWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMH 358
V GR K + +G P LVD Y++ + +D +VT + L ++ EAF MH
Sbjct: 288 LLDVFGRGGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMH 347
Query: 359 GGDCLRCVL 367
GD LR V+
Sbjct: 348 AGDVLRSVV 356
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358 |
| >gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Score = 208 bits (532), Expect = 1e-64
Identities = 113/370 (30%), Positives = 161/370 (43%), Gaps = 40/370 (10%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 62
KAAV + +PL IE+V V P GEV IK+ +CHTD + G P P I GHE
Sbjct: 5 KAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHE 64
Query: 63 AAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
G V VGEGVT ++ GD V + C EC++C+SG NLC +
Sbjct: 65 IVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITG--------- 115
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
++ +G +++Y VV V KI L + L C T A+
Sbjct: 116 ---YTTDG----------GYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRAL-KK 161
Query: 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
A V+PG VAV G G +G + AKA GA VI I +K + AK G +N D
Sbjct: 162 ANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVINSSD- 219
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
++ V D + +G ++ +L+ +G GT V+VG+ G F
Sbjct: 220 SDALEAV-----KEIADAIIDTVGPATL-EPSLKALRRG-GTLVLVGLPGGGPIPLLPAF 272
Query: 302 QLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGG 360
L+ G+ G R+ + +D E K+ + + L EINEA+ M G
Sbjct: 273 LLILKEISIVGSLVGT---RADLEEALD--FAAEGKIKPEILETIPLDEINEAYERMEKG 327
Query: 361 DCL-RCVLKM 369
R V+ M
Sbjct: 328 KVRGRAVIDM 337
|
Length = 339 |
| >gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 196 bits (501), Expect = 6e-61
Identities = 81/290 (27%), Positives = 115/290 (39%), Gaps = 31/290 (10%)
Query: 28 EVRIKILFTALCHTDAYTWSGKDPEGL-FPCILGHEAAGIVESVGEGVTEVQPGDHVIPC 86
EV +++ LC TD + G P P ILGHE AG+V VG GVT V+ GD V+
Sbjct: 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVL 60
Query: 87 YQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTV 146
C C+ C+ I F++Y V
Sbjct: 61 PNLGCGTCELCRELCPGGG--------------------------ILGEGLDGGFAEYVV 94
Query: 147 VHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGA 206
V ++ + L++ LL + T A+ ++PG V V G G VGL A+ A
Sbjct: 95 VPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLA 154
Query: 207 KAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 266
KAAGA RVI D +K + AK G ++ K+ D + L GG D + +G
Sbjct: 155 KAAGA-RVIVTDRSDEKLELAKELGADHVIDYKEEDLE--EELRLTGGGGADVVIDAVGG 211
Query: 267 VSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGG 316
+ AL G G V+VG + G + L G+ G
Sbjct: 212 PETLAQALRLLRPG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGT 260
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271 |
| >gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 192 bits (489), Expect = 4e-58
Identities = 102/373 (27%), Positives = 151/373 (40%), Gaps = 30/373 (8%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFP-CILGH 61
KAAV + + +E+ P G+V I++ T +C +D + + G +P ILGH
Sbjct: 2 KAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGH 61
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
E G V VG V + GD V+ C C++C++G+ NLC AG+
Sbjct: 62 EFVGEVVEVGV-VRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGG-- 118
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
I+G F++Y V P ++ L + T
Sbjct: 119 -----IDG----------GFAEYVRVPADFNLAKLPDGIDEEAAALTEPLATAYHGHAER 163
Query: 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
A V PG V V G G +GL AK GAS VI +D P++ + AK G + V
Sbjct: 164 AAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSE 223
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
D ++L G D E +G+ + ALE G GT V+VGV G E P
Sbjct: 224 DDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGV--YGGEDIPLPA 280
Query: 302 QLVTGRVWKGTAFGG---FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYM- 357
LV V K G R +D +I ++ +TH + L + EA+
Sbjct: 281 GLV---VSKELTLRGSLRPSGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFA 337
Query: 358 -HGGDCLRCVLKM 369
+ ++ VLK
Sbjct: 338 DRKEEAIKVVLKP 350
|
Length = 350 |
| >gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH) | Back alignment and domain information |
|---|
Score = 187 bits (478), Expect = 2e-56
Identities = 100/380 (26%), Positives = 158/380 (41%), Gaps = 33/380 (8%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
+AAV P KPL I +V + + G V +++ +C +D +T +G+ P P ILGH
Sbjct: 1 ARAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGH 60
Query: 62 EAAGIVESVGEGVTE------VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAG 115
E G V ++G GVT ++ GD V A C C C G C +
Sbjct: 61 EGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKK----- 115
Query: 116 VMMNDRKSRFSIN-GKPIYHFMGTSTFSQYTVVH-DVSVAKIDPQAPLDKVCLLGCGVPT 173
+ H G ++++ + ++ ++ P + C + T
Sbjct: 116 ---------YGHEASCDDPHLSG--GYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALAT 164
Query: 174 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 233
L A+ V G V V G G +GL AK AGA RVI ID P++ + A+ FG
Sbjct: 165 VLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGAD 224
Query: 234 EFVNPKDHDKPIQQVLV-DLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 291
++ + P ++ +V D+T G G D E G+ + + LE +G GT V+VG A
Sbjct: 225 ATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVA 283
Query: 292 SGQEISTRPFQLVTGRVW---KGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLG 348
+ P ++V R G + +++ + E VTH L
Sbjct: 284 PAGTVPLDPERIV--RKNLTIIGVHNYDPSHLYRAVRFLERT-QDRFPFAELVTHRYPLE 340
Query: 349 EINEAFRYMHGGDCLRCVLK 368
+INEA G L+ V+
Sbjct: 341 DINEALELAESGTALKVVID 360
|
This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361 |
| >gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 182 bits (464), Expect = 2e-54
Identities = 91/307 (29%), Positives = 134/307 (43%), Gaps = 27/307 (8%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 62
+AAV E +PL I +V P V +++ +C +D + W G DP+ P + GHE
Sbjct: 2 RAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHE 61
Query: 63 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRK 122
AG+V VGE V+ + GD V + C C +C++G +N+C
Sbjct: 62 FAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQV------------- 108
Query: 123 SRFSINGKPIYHFMGTSTFSQYTVVH--DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN 180
F +F++Y V DV++ ++ LGC T A+ +
Sbjct: 109 ---------QPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVH 159
Query: 181 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240
A+V+PG VAV G G VGL+ A A GA RVI +DID K + A+ G VN +
Sbjct: 160 QARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNASE 218
Query: 241 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP 300
+ V DLT GG S + +G R ++ K G V VG+ + P
Sbjct: 219 VEDVAAAV-RDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALP 276
Query: 301 FQLVTGR 307
V R
Sbjct: 277 MDRVVAR 283
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345 |
| >gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases | Back alignment and domain information |
|---|
Score = 178 bits (454), Expect = 5e-53
Identities = 108/377 (28%), Positives = 164/377 (43%), Gaps = 41/377 (10%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 62
KA V P K + E + +++ T++C +D + + G P ILGHE
Sbjct: 2 KALVYLGPGKIGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHE 61
Query: 63 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRK 122
G V VG V ++PGD V C C+FC+ G C
Sbjct: 62 FVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCE---------------- 105
Query: 123 SRFSINGKPIYHFMGTSTFSQYTVVH----DVSVAKIDPQAPLDKVCLLGCGVPTGL-GA 177
NG + Q V D+++AKI P + +L +PTG GA
Sbjct: 106 -----NGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGA 160
Query: 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237
A ++PGS VAV G G VGL GA+ GA+R+I +D +P++ D AK G T+ +N
Sbjct: 161 E--LAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIIN 218
Query: 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI 296
PK+ ++Q+L +LT G GVD E +G A++ G GT VGV +
Sbjct: 219 PKN-GDIVEQIL-ELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPL 275
Query: 297 STRPFQLVTGRVWKGTAF--GGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAF 354
G K F G R+++P L+D + +I + +TH L +I +A+
Sbjct: 276 P--LLGEWFG---KNLTFKTGLVPVRARMPELLDLIEEGKIDPSKLITHRFPLDDILKAY 330
Query: 355 RYMHGG--DCLRCVLKM 369
R C++ V++
Sbjct: 331 RLFDNKPDGCIKVVIRP 347
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347 |
| >gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase | Back alignment and domain information |
|---|
Score = 168 bits (427), Expect = 3e-49
Identities = 114/378 (30%), Positives = 164/378 (43%), Gaps = 57/378 (15%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 62
KA V +E L +E+V V P EV IK+ +C TD + + G+ P + GHE
Sbjct: 2 KALV-YEGPGELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGAA-PPLVPGHE 59
Query: 63 AAGIVESVGEGVTEVQPGDHV-----IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 117
AG+V +VG VT + GD V I C EC +C+ G+ NLC + T GV
Sbjct: 60 FAGVVVAVGSKVTGFKVGDRVAVDPNIYCG-----ECFYCRRGRPNLCENL---TAVGVT 111
Query: 118 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCL---LGCGVPTG 174
N G F++Y VV V KI ++ L L C
Sbjct: 112 RN--------GG-----------FAEYVVVPAKQVYKIPDNLSFEEAALAEPLSC----- 147
Query: 175 LGAVW--NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 232
AV + ++PG V VFG G +GL +A+ K GASRV + + +K + AK G
Sbjct: 148 --AVHGLDLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGA 205
Query: 233 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 292
TE V+P D Q+ + G D E G + A+E +G GT ++ GV A
Sbjct: 206 TETVDPSREDPEAQK---EDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAP 261
Query: 293 GQEISTRPFQLVTGRVWKG--TAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEI 350
+S PF +++ T G F + P + +I V V+H + L E+
Sbjct: 262 DARVSISPF-----EIFQKELTIIGSFINPYTFPRAIALLESGKIDVKGLVSHRLPLEEV 316
Query: 351 NEAFRYMHGGDCLRCVLK 368
EA M G L+ V+
Sbjct: 317 PEALEGMRSGGALKVVVV 334
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334 |
| >gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases | Back alignment and domain information |
|---|
Score = 167 bits (426), Expect = 7e-49
Identities = 101/374 (27%), Positives = 160/374 (42%), Gaps = 55/374 (14%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 62
KA V P L ED+ P GEV +K+ +C +D + G P +LGHE
Sbjct: 2 KALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGAYH-PPLVLGHE 59
Query: 63 AAGIVESVGEGVTEVQPGDHV-----IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 117
+G VE VG GV ++ GD V +PC +C++CK G+ +LC
Sbjct: 60 FSGTVEEVGSGVDDLAVGDRVAVNPLLPCG-----KCEYCKKGEYSLCSN---------- 104
Query: 118 MNDRKSRFSINGKPIYHFMGTS---TFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP-- 172
Y ++G+ F++Y V ++ KI ++ ++ P
Sbjct: 105 ---------------YDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMIE---PAA 146
Query: 173 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 232
L AV A + G V V G GT+GL + K GA RVI +DID +K A+ G
Sbjct: 147 VALHAVRL-AGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGA 205
Query: 233 TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 291
+ +NPK+ D + + +LT+G G D E G+ + + AL G G V+VG+
Sbjct: 206 DDTINPKEED---VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPY 261
Query: 292 SGQEISTRPFQLVTGR--VWKGTAFGGFKSRSQVPW--LVDKYMKKEIKVDEYVTHNMTL 347
+S F+ + + +G+ W +D +IKV+ +TH + L
Sbjct: 262 GDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPL 321
Query: 348 GEINEAFRYMHGGD 361
+ AF + +
Sbjct: 322 EDGPAAFERLADRE 335
|
This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343 |
| >gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase | Back alignment and domain information |
|---|
Score = 165 bits (421), Expect = 5e-48
Identities = 94/327 (28%), Positives = 141/327 (43%), Gaps = 51/327 (15%)
Query: 5 AVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTD--AYTWSG-----KDPEGL--- 54
A + K + +E+V P + GEV+IK+ + +C +D Y G +
Sbjct: 3 AARYHGRKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYL-DGPIFIPTEGHPHLTG 61
Query: 55 --FPCILGHEAAGIVESVGEGVTEVQPGDHVI--PCYQAECRECKFCKSGKTNLCGKVRG 110
P LGHE +G+V VG GVT + GD V+ P + C C CK G NLC + G
Sbjct: 62 ETAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIK--CGTCGACKRGLYNLCDSL-G 118
Query: 111 ATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCG 170
G G G F++Y VV V K+ PL++ L+
Sbjct: 119 FIGLGGG----------GG----------GFAEYVVVPAYHVHKLPDNVPLEEAALVE-- 156
Query: 171 VPT--GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 228
P AV + +PG V G G +GL KAAGAS++I + + + A+
Sbjct: 157 -PLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAE 214
Query: 229 NFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIV 287
G T ++P + D + + LT G GVD SF+C G + + A++ GT+V V
Sbjct: 215 ELGATIVLDPTEVD--VVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNV 271
Query: 288 GVAASGQEISTRPFQLV-TGRVWKGTA 313
+ + IS P LV + G+
Sbjct: 272 AIW--EKPISFNPNDLVLKEKTLTGSI 296
|
(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351 |
| >gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase | Back alignment and domain information |
|---|
Score = 165 bits (420), Expect = 5e-48
Identities = 103/383 (26%), Positives = 156/383 (40%), Gaps = 58/383 (15%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 62
KAAV PN + +E+V V P GEV +K+ +C TD G + P ILGHE
Sbjct: 2 KAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHE 60
Query: 63 AAGIVESVGEGVTEVQPGD-----HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 117
AG + VG+GVT + GD +PC EC +C G N+C +
Sbjct: 61 IAGEIVEVGDGVTGFKVGDRVFVAPHVPCG-----ECHYCLRGNENMCPNYKKFG----- 110
Query: 118 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVA-----KIDPQAPLDKVCL---LGC 169
+ G F++Y V +V K+ ++ L L C
Sbjct: 111 ---------------NLYDGG--FAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLAC 153
Query: 170 GVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 229
+ A ++PG V V G G +GL A AKA+GA +VI D++ + + AK
Sbjct: 154 CI-----NAQRKAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKK 208
Query: 230 FGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVG 288
G ++ + D +++V +LTDG G D G+ ALE KG G + G
Sbjct: 209 LGADYTIDAAEED-LVEKVR-ELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFG 265
Query: 289 VAASGQEISTRPFQLVTGRVWKG--TAFGGFK-SRSQVPWLVDKYMKKEIKVDEYVTHNM 345
G ++ + + T G + S ++ +I V + +TH
Sbjct: 266 GLPKGSTVN-----IDPNLIHYREITITGSYAASPEDYKEALELIASGKIDVKDLITHRF 320
Query: 346 TLGEINEAFRYMHGGDCLRCVLK 368
L +I EAF G L+ V+
Sbjct: 321 PLEDIEEAFELAADGKSLKIVIT 343
|
Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343 |
| >gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members | Back alignment and domain information |
|---|
Score = 163 bits (415), Expect = 2e-47
Identities = 103/350 (29%), Positives = 147/350 (42%), Gaps = 34/350 (9%)
Query: 12 KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESV 70
LV+E+V V P GEV +K+ +CH+D + G P P LGHE AG V V
Sbjct: 12 GLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEV 71
Query: 71 GEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGK 130
G GVT + GD V C C C+ G+ NLC +N I+G
Sbjct: 72 GAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLC------------LNQGMPGLGIDG- 118
Query: 131 PIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIV 190
F++Y VV ++ + P + + V T AV +V+PG V
Sbjct: 119 ---------GFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETV 169
Query: 191 AVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLV 250
V GLG +GL + AKA GA VI +DI +K + AK G E +N D D P +
Sbjct: 170 LVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSLD-DSPKDKKAA 227
Query: 251 DLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWK 310
L GG D F+ +G A + G G V+VG+ + L+ +
Sbjct: 228 GL-GGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRDKLTVDL--SDLIARELRI 283
Query: 311 GTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGG 360
+FGG + +P ++D K ++ L EI E +H G
Sbjct: 284 IGSFGG--TPEDLPEVLDLIAKGKLDP---QVETRPLDEIPEVLERLHKG 328
|
This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338 |
| >gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 160 bits (406), Expect = 6e-46
Identities = 106/361 (29%), Positives = 161/361 (44%), Gaps = 51/361 (14%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 62
KA V +P + L + D+ P AGEV +++ +C +D + + G++P +P ILGHE
Sbjct: 2 KALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHE 60
Query: 63 AAGIVESVGEGVTEVQPGDHV--IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 120
+G V VGEGV ++ GD V P C EC C+ G+ N C ++ V+
Sbjct: 61 LSGEVVEVGEGVAGLKVGDRVVVDPYI--SCGECYACRKGRPNCCENLQ------VLGVH 112
Query: 121 RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA-VW 179
R +G F++Y VV + LD+ L+ P +GA
Sbjct: 113 R------DG----------GFAEYIVV-PADALLVPEGLSLDQAALVE---PLAIGAHAV 152
Query: 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 239
A V G V V G G +GL V + AKA GA RVI +DID ++ + A+ G + +N
Sbjct: 153 RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVG 211
Query: 240 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALE-CCHKGWGTSVIVGVAASGQEIS 297
D D + L +LTDG G D + GN + M A+E H G V+VG++
Sbjct: 212 DED--VAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG--GRVVLVGLSKGPVTFP 267
Query: 298 TRPFQLVTGRVWKGTAFGGFKSRSQVPW----LVDKYMKKEIKVDEYVTHNMTLGEINEA 353
F K G SR+ ++D ++ + +TH ++ EA
Sbjct: 268 DPEF------HKKELTILG--SRNATREDFPDVIDLLESGKVDPEALITHRFPFEDVPEA 319
Query: 354 F 354
F
Sbjct: 320 F 320
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337 |
| >gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase | Back alignment and domain information |
|---|
Score = 159 bits (405), Expect = 9e-46
Identities = 116/389 (29%), Positives = 168/389 (43%), Gaps = 87/389 (22%)
Query: 4 AAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWS-GKDPEGLF----PCI 58
AAV P L +E+ + P GEV +++ +C +D + + G+ G F P +
Sbjct: 1 AAVLHGPGD-LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRI--GDFVVKEPMV 57
Query: 59 LGHEAAGIVESVGEGVTEVQPGDHV-----IPCYQAECRECKFCKSGKTNLCGKVRGATG 113
LGHE+AG V +VG GVT ++ GD V +PC R C+FCKSG+ NLC +R
Sbjct: 58 LGHESAGTVVAVGSGVTHLKVGDRVAIEPGVPC-----RTCEFCKSGRYNLCPDMR---- 108
Query: 114 AGVMMNDRKSRFSINGKPIYHFMGTS----TFSQYTVVHD----------VSV---AKID 156
F T T +Y V H VS+ A ++
Sbjct: 109 ---------------------FAATPPVDGTLCRY-VNHPADFCHKLPDNVSLEEGALVE 146
Query: 157 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIG 216
P + V + C A V PG V VFG G +GL A AKA GA++V+
Sbjct: 147 PLS----VGVHAC----------RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVV 192
Query: 217 IDIDPKKFDRAKNFGVTEFVNPKDHDKP-IQQVLVDLTDG-GVDYSFECIGNVSVMRAAL 274
DIDP + + AK G T VN + D P + + +L G G D EC G S ++ A+
Sbjct: 193 TDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAI 252
Query: 275 ECCHKGWGTSVIVGVAASGQEISTRPFQLVTGR--VWKGTAFGGFKSRSQVPWLVDKYMK 332
G GT V+VG+ G+ T P + R +G F+ + P ++
Sbjct: 253 YATRPG-GTVVLVGM---GKPEVTLPLSAASLREIDIRGV----FRYANTYPTAIELLAS 304
Query: 333 KEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
++ V +TH L + EAF G
Sbjct: 305 GKVDVKPLITHRFPLEDAVEAFETAAKGK 333
|
Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343 |
| >gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Score = 155 bits (394), Expect = 3e-44
Identities = 91/364 (25%), Positives = 148/364 (40%), Gaps = 42/364 (11%)
Query: 11 NKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTW-SGKDPEGLFPCILGHEAAGIVES 69
++ + + + V P GEV +++ + LC +D + + G I GHE AG+V +
Sbjct: 9 DRTVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVA 68
Query: 70 VGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSING 129
VG GVT + GD V+ + C C+ C+ G LC +
Sbjct: 69 VGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLC---------------------TSK 107
Query: 130 KPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSI 189
+ Y + ++Y +V + ++ + LL CG+ T A+ V
Sbjct: 108 RAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHAL-RRVGVSGRDT 166
Query: 190 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVL 249
V V G G VGL A+A GA VIG+D P++ + AK G +N D Q +
Sbjct: 167 VLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDD---VQEI 223
Query: 250 VDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS-----GQEISTRPFQL 303
+LT G G D + EC GN + R ALE WG V+VG ++ + L
Sbjct: 224 RELTSGAGADVAIECSGNTAARRLALEAVRP-WGRLVLVGEGGELTIEVSNDLIRKQRTL 282
Query: 304 VTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL 363
+ + + + + +++VD VTH L + EA+ G+
Sbjct: 283 IGSWY---FSVPDMEE------CAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGESG 333
Query: 364 RCVL 367
+ V
Sbjct: 334 KVVF 337
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339 |
| >gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 155 bits (393), Expect = 3e-44
Identities = 115/370 (31%), Positives = 164/370 (44%), Gaps = 43/370 (11%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 62
KAA+ +PNKPL IE+V P GEV IK+ +C+ D W G P G +P ILGHE
Sbjct: 2 KAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHE 61
Query: 63 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRK 122
G VE VGEGV +PGD VI Y C +C++C SG+ NLC
Sbjct: 62 IVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRA------------- 108
Query: 123 SRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTA 182
Y F++Y V + S+ K+ + L C V T + A+ A
Sbjct: 109 ---------EYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHAL-KRA 158
Query: 183 KVEPGSIVAV-FGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
V+ G V V G VG+ + AKA GA RVI + P+K K G ++
Sbjct: 159 GVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGSKF 217
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
+ ++++ GG D E +G + +L +KG G V++G RP
Sbjct: 218 SEDVKKL------GGADVVIELVG-SPTIEESLRSLNKG-GRLVLIGNVT-PDPAPLRPG 268
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMK--KEIKVDEYVTHNMTLGEINEAFRYMHG 359
L+ K G S S V++ +K KE K+ + ++L +INEA +
Sbjct: 269 LLIL----KEIRIIG--SISATKADVEEALKLVKEGKIKPVIDRVVSLEDINEALEDLKS 322
Query: 360 GDCL-RCVLK 368
G + R VLK
Sbjct: 323 GKVVGRIVLK 332
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332 |
| >gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1 | Back alignment and domain information |
|---|
Score = 148 bits (375), Expect = 5e-41
Identities = 109/405 (26%), Positives = 164/405 (40%), Gaps = 61/405 (15%)
Query: 5 AVAWEPNKPLVIEDVQVAPP---QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
A+ W + +E+V P + +++ TA+C +D + + G P ILGH
Sbjct: 3 ALVWHGKGDVRVEEV--PDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGH 60
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
E G+VE VG V ++ GD V+ + C EC +CK G + C + +
Sbjct: 61 EFMGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHA 120
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVH----DVSVAKIDPQAPLDKVCLLGCGVPTGLGA 177
+ I G H G Q V DV KI +K L +PTG A
Sbjct: 121 GA--GIFGYS--HLTGGYAGGQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYHA 176
Query: 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237
A+V+PG VAV+G G VGL A AK GA RVI ID P++ + A++ E +N
Sbjct: 177 A-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETIN 235
Query: 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIG---------------------NVSVMRAALE 275
++ D + + L +LT G G D + +G +R A++
Sbjct: 236 FEEVDDVV-EALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQ 294
Query: 276 CCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAF--------GGFKSRSQVPWLV 327
KG GT I+GV F + G A G + +P L+
Sbjct: 295 AVRKG-GTVSIIGVYGGT----VNKFPI-------GAAMNKGLTLRMGQTHVQRYLPRLL 342
Query: 328 DKYMKKEIKVDEYVTHNMTLGEINEA---FRYMHGGDCLRCVLKM 369
+ E+ +TH + L + EA F G C++ VLK
Sbjct: 343 ELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDG-CIKVVLKP 386
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386 |
| >gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins | Back alignment and domain information |
|---|
Score = 144 bits (364), Expect = 5e-40
Identities = 100/364 (27%), Positives = 144/364 (39%), Gaps = 46/364 (12%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 62
KAAV PL E+V V P GEV IKI +CHTD + G +P + GHE
Sbjct: 1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHE 60
Query: 63 AAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
G V VG GV + GD V + C C++C+ G NLC K TG
Sbjct: 61 IVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVN-TG-------- 111
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN- 180
++ G +++Y V + PL + L C T V++
Sbjct: 112 ---YTTQG----------GYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGIT----VYSA 154
Query: 181 --TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238
A PG VAV G+G +G + A+A G + I P K + A+ G E V+
Sbjct: 155 LRDAGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDS 213
Query: 239 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIST 298
++ GG D + + + AAL +G G V+VG+ S S
Sbjct: 214 G------AELDEQAAAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPESPPF-SP 265
Query: 299 RPFQLVTGRVW-KGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYM 357
F L+ R G+ GG + +D + ++K L + NEA+ M
Sbjct: 266 DIFPLIMKRQSIAGSTHGGRADLQE---ALDFAAEGKVKPM---IETFPLDQANEAYERM 319
Query: 358 HGGD 361
GD
Sbjct: 320 EKGD 323
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330 |
| >gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 143 bits (363), Expect = 1e-39
Identities = 108/366 (29%), Positives = 162/366 (44%), Gaps = 40/366 (10%)
Query: 2 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCIL 59
KAAV E KP ++DV V P GEV +K+ + +CHTD + G P + P I
Sbjct: 1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIG 60
Query: 60 GHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 118
GHE AG+V +VG GV+ ++ GD V + C +C++C++G LC +G
Sbjct: 61 GHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPN---QKNSG--- 114
Query: 119 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 178
++++G TF++Y + V I ++ L C T A+
Sbjct: 115 ------YTVDG----------TFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKAL 158
Query: 179 WNTAKVEPGSIVAVFGL-GTVG-LAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 236
A ++PG V + G G +G L V AKA G RVI ID+ +K + AK G FV
Sbjct: 159 -KKAGLKPGDWVVISGAGGGLGHLGVQY-AKAMGL-RVIAIDVGDEKLELAKELGADAFV 215
Query: 237 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI 296
+ K D ++ V GG + + AL+ G GT V VG+ G I
Sbjct: 216 DFKKSD-DVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPPGGF-I 272
Query: 297 STRPFQLV-TGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFR 355
PF LV G G+ G +R + ++ + ++K V L ++NE F
Sbjct: 273 PLDPFDLVLRGITIVGSLVG---TRQDLQEALEFAARGKVKPHIQVV---PLEDLNEVFE 326
Query: 356 YMHGGD 361
M G
Sbjct: 327 KMEEGK 332
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341 |
| >gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase | Back alignment and domain information |
|---|
Score = 141 bits (357), Expect = 7e-39
Identities = 103/373 (27%), Positives = 160/373 (42%), Gaps = 44/373 (11%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL---FPCIL 59
KAA +E KPL +EDV V P G+V +++ +CH+D + G L P L
Sbjct: 2 KAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTL 61
Query: 60 GHEAAGIVESVGEGVTEVQPGDHVIPCY-QAECRECKFCKSGKTNLCGKVRGATGAGVMM 118
GHE AG VE VG GV ++ GD V+ + C C++C+ G+ N C
Sbjct: 62 GHENAGWVEEVGSGVDGLKEGDPVV-VHPPWGCGTCRYCRRGEENYC------------E 108
Query: 119 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 178
N R +G F++Y +V + K+ + L T AV
Sbjct: 109 NARFPGIGTDG----------GFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAV 158
Query: 179 WNTAKV-EPGSIVAVFGLGTVG-LAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 236
+PGS V V G+G +G +AV + +A + VI +D + A+ G +
Sbjct: 159 KKALPYLDPGSTVVVIGVGGLGHIAV-QILRALTPATVIAVDRSEEALKLAERLGADHVL 217
Query: 237 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE 295
N D +++V +LT G G D + +G+ + A + KG G VIVG G
Sbjct: 218 NAS--DDVVEEVR-ELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGHG-R 272
Query: 296 ISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFR 355
+ T + T G+ G +R+++ +V + + KV +T L + NEA
Sbjct: 273 LPTSDL-VPTEISVIGS-LWG--TRAELVEVVA--LAESGKVKVEITKFP-LEDANEALD 325
Query: 356 YMHGGDCL-RCVL 367
+ G R VL
Sbjct: 326 RLREGRVTGRAVL 338
|
This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340 |
| >gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2 | Back alignment and domain information |
|---|
Score = 139 bits (353), Expect = 3e-38
Identities = 100/370 (27%), Positives = 161/370 (43%), Gaps = 33/370 (8%)
Query: 5 AVAWEPNKPLVIEDVQV-APPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEA 63
AV ++ + +E+V + + +K+ A+C +D + + G P +LGHE
Sbjct: 3 AVVFKGPGDVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPSTP-GFVLGHEF 61
Query: 64 AGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKS 123
G V VG V ++ GD V+ + C EC +C+ G++ C K AG
Sbjct: 62 VGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAG-------- 113
Query: 124 RFSINGKPIYHFMGTSTFSQYTVV--HDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
+++G ++Y V D ++ K+ + LLG +PTG
Sbjct: 114 SPNLDGAQ----------AEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGYFGAKR- 162
Query: 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
A+V PG VAV G G VGL A+ GA+RV +D P++ +RA G E +N +D
Sbjct: 163 AQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALG-AEPINFED- 220
Query: 242 DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP 300
+P+++V + T+G G D E +G + + A + G VGV + +E P
Sbjct: 221 AEPVERVR-EATEGRGADVVLEAVGGAAALDLAFDLVRP-GGVISSVGVHTA-EEF---P 274
Query: 301 FQLVTGRVWKGT-AFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHG 359
F + T FG RS P L+ + ++ + H M L E EA+R
Sbjct: 275 FPGLDAYNKNLTLRFGRCPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDK 334
Query: 360 GDCLRCVLKM 369
L+ VL
Sbjct: 335 RKVLKVVLDP 344
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344 |
| >gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase | Back alignment and domain information |
|---|
Score = 134 bits (339), Expect = 3e-36
Identities = 117/385 (30%), Positives = 166/385 (43%), Gaps = 67/385 (17%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDA--YTW-----SGKDPEGLF 55
KA V + + +V V P GEV IK+L ++C TD Y W S P
Sbjct: 2 KAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKP---- 57
Query: 56 PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAE----CRECKFCKSGKTNLCGKVRGA 111
P I GHE AG V VGEGVT V+ GD+V AE C +C C++G ++C +
Sbjct: 58 PLIFGHEFAGEVVEVGEGVTRVKVGDYV----SAETHIVCGKCYQCRTGNYHVCQNTK-- 111
Query: 112 TGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCL---LG 168
GV D +G F++Y VV + ++ K D P + + LG
Sbjct: 112 -ILGV---DT------DG----------CFAEYVVVPEENLWKNDKDIPPEIASIQEPLG 151
Query: 169 CGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 228
V T L V G V + G G +GL AKAAGAS VI D +P + + AK
Sbjct: 152 NAVHTVL-----AGDV-SGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAK 205
Query: 229 NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVG 288
G +NP++ D + +V GVD E GN + L+ G G I+G
Sbjct: 206 KMGADVVINPREED--VVEVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILG 262
Query: 289 VAASGQEISTRPFQLVTGRVWKG-TAFG--G---FKSRSQVPWLVDKYMKKEIKVDEYVT 342
+ + L ++KG T G G F++ QV L+ ++ + +T
Sbjct: 263 L--PPGPVD---IDLNNLVIFKGLTVQGITGRKMFETWYQVSALLK---SGKVDLSPVIT 314
Query: 343 HNMTLGEINEAFRYMHGGDCLRCVL 367
H + L + EAF M G C + VL
Sbjct: 315 HKLPLEDFEEAFELMRSGKCGKVVL 339
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341 |
| >gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase | Back alignment and domain information |
|---|
Score = 133 bits (336), Expect = 9e-36
Identities = 101/381 (26%), Positives = 148/381 (38%), Gaps = 45/381 (11%)
Query: 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSG------------ 48
M AAV EP KPL ++ P EV +K+ +CH+D + W G
Sbjct: 1 MKAAAVV-EPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSL 59
Query: 49 KDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKV 108
D P +LGHE G V +VG +V+ GD V+ C EC C +G NLC K
Sbjct: 60 DDRGVKLPLVLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKG 119
Query: 109 RGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLG 168
R A G I+ G +++Y +V L
Sbjct: 120 R-ALG------------------IFQDGG---YAEYVIVPHSRYLVDPGGLDPALAATLA 157
Query: 169 CGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 228
C T AV + V + G G +GL KA G + +I +DID K + AK
Sbjct: 158 CSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAK 217
Query: 229 NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVG 288
G VN D D + ++ GGVD + + N + A + KG G V+VG
Sbjct: 218 AAGADVVVNGSDPDAAKR--IIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVG 274
Query: 289 VAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLG 348
+ + P + +G+ G S ++ LV + K K+ L
Sbjct: 275 LFGGEATLPL-PLLPLRALTIQGSYVG---SLEELRELVA--LAKAGKLKPIPLTERPLS 328
Query: 349 EINEAFRYMHGGDCL-RCVLK 368
++N+A + G + R VLK
Sbjct: 329 DVNDALDDLKAGKVVGRAVLK 349
|
6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350 |
| >gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 132 bits (334), Expect = 1e-35
Identities = 93/360 (25%), Positives = 143/360 (39%), Gaps = 47/360 (13%)
Query: 11 NKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL-FPCILGHEAAGIVES 69
+ L D+ P EV +++ AL H D + G L P ILG + AG+VE+
Sbjct: 12 PEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEA 71
Query: 70 VGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSING 129
VG GVT V+PG V+ C C++C +G+ NLC +++ I G
Sbjct: 72 VGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLC-----------------AQYGILG 114
Query: 130 KPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT----AKVE 185
H G +++Y V ++ I ++ P W+ A++
Sbjct: 115 ---EHVDG--GYAEYVAVPARNLLPIPDNLSFEE----AAAAPLTFLTAWHMLVTRARLR 165
Query: 186 PGSIVAVFGLGT-VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKP 244
PG V V G G+ VG A + AK GA VI K +RAK G ++ + D
Sbjct: 166 PGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVIDYRKEDFV 224
Query: 245 IQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL 303
+ + +LT GVD E +G + +L+ +G G V G A +G E +
Sbjct: 225 --REVRELTGKRGVDVVVEHVGA-ATWEKSLKSLARG-GRLVTCG-ATTGYEAPI-DLRH 278
Query: 304 VTGRVWK--GTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
V R G+ G + LV K+ + L E EA R + +
Sbjct: 279 VFWRQLSILGSTMGTKAELDEALRLVF-----RGKLKPVIDSVFPLEEAAEAHRRLESRE 333
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342 |
| >gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Score = 131 bits (331), Expect = 5e-35
Identities = 83/305 (27%), Positives = 127/305 (41%), Gaps = 43/305 (14%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYT-WSGK--DPEGLFPCIL 59
KA K IE + + ++ A C +D +T W G + G+ IL
Sbjct: 2 KAFAMLGIGKVGWIE-KPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGM---IL 57
Query: 60 GHEAAGIVESVGEGVTEVQPGDHVI-----PCYQAECRECKFCKSGKTNLCGKVRGATGA 114
GHEA G+VE VG V + +PGD VI P ++ + G + G
Sbjct: 58 GHEAVGVVEEVGSEVKDFKPGDRVIVPAITPDWR-----SVAAQRGYPSQSG-------- 104
Query: 115 GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQAPLDKVCLLGCGVP 172
M+ K +G F++Y V+D ++A + ++ +L +
Sbjct: 105 -GMLGGWKFSNFKDG----------VFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMS 153
Query: 173 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 232
TG A ++ G VAVFG+G VGL GA+ GA R+I + P + + AK +G
Sbjct: 154 TGFHGAEL-ANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGA 212
Query: 233 TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 291
T+ V+ K+ D ++Q+L LT G GVD G AL+ G GT V
Sbjct: 213 TDIVDYKNGD-VVEQIL-KLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYG 269
Query: 292 SGQEI 296
+
Sbjct: 270 EDDYL 274
|
This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351 |
| >gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Score = 128 bits (324), Expect = 4e-34
Identities = 112/366 (30%), Positives = 159/366 (43%), Gaps = 54/366 (14%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQ---AGEVRIKILFTALCHTDAYTWSGKDPEGLFPCIL 59
KA V P K I P + +K+L T +C TD + G P IL
Sbjct: 2 KALVYHGPGK---ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRIL 58
Query: 60 GHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 118
GHE G+VE VG VT + GD V I C + C C +C+ G + C +G ++
Sbjct: 59 GHEGVGVVEEVGSAVTNFKVGDRVLISCISS-CGTCGYCRKGLYSHC-----ESGGWILG 112
Query: 119 NDRKSRFSINGKPIYHFMGTSTFSQYT-VVH-DVSVAKIDPQAPLDKVCLLGCGVPTGL- 175
N I+G T ++Y + H D S+ K+ + +L +PTG
Sbjct: 113 NL------IDG----------TQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYE 156
Query: 176 GAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 235
V N KV+PG VA+ G G VGLA A+ S++I +D+D + + AK G T
Sbjct: 157 CGVLN-GKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHT 215
Query: 236 VNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHK----GWGTSVIVGVA 290
VN D I+QVL +LTDG GVD E +G + A E C + G G VGV
Sbjct: 216 VNSAKGD-AIEQVL-ELTDGRGVDVVIEAVG----IPATFELCQELVAPG-GHIANVGV- 267
Query: 291 ASGQEISTRPFQLVTGRVW-KGTAFG-GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLG 348
+P L ++W K G + P L+ ++ + VTH L
Sbjct: 268 ------HGKPVDLHLEKLWIKNITITTGLVDTNTTPMLLKLVSSGKLDPSKLVTHRFKLS 321
Query: 349 EINEAF 354
EI +A+
Sbjct: 322 EIEKAY 327
|
This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345 |
| >gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 122 bits (310), Expect = 4e-32
Identities = 86/317 (27%), Positives = 126/317 (39%), Gaps = 47/317 (14%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 62
K A + + L + P +V IKI + +CH+D +T + +P + GHE
Sbjct: 1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHE 60
Query: 63 AAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
GIV +VG VT+ + GD V + C C C+ CKSG+ C K
Sbjct: 61 IVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTY--------- 111
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA-VWN 180
NGK + ++ + VV + V KI L C G V++
Sbjct: 112 ------NGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCA-----GITVYS 160
Query: 181 ---TAKVEPGSIVAVFGLGTVG-LAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 236
V PG V V G+G +G LAV + AKA GA V P K + A G EF+
Sbjct: 161 PLKRNGVGPGKRVGVVGIGGLGHLAV-KFAKALGA-EVTAFSRSPSKKEDALKLGADEFI 218
Query: 237 NPKDHD--KPIQQ---VLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 291
KD + K +++D D +S+++ GT V+VG
Sbjct: 219 ATKDPEAMKKAAGSLDLIIDTVSASHDLDPY----LSLLKPG--------GTLVLVGAPE 266
Query: 292 SGQEISTRPFQLVTGRV 308
+ PF L+ GR
Sbjct: 267 EPLPVP--PFPLIFGRK 281
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337 |
| >gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Score = 121 bits (306), Expect = 2e-31
Identities = 91/366 (24%), Positives = 134/366 (36%), Gaps = 74/366 (20%)
Query: 14 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLF-------PCILGHEAAGI 66
L +E+ P GEVR+++ +C +D + + G F P +LGHE +G+
Sbjct: 9 LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQ----HGGFGTVRLREPMVLGHEVSGV 64
Query: 67 VESVGEGVTEVQPGDHVI-----PCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
VE+VG GVT + PG V PC C +C++G+ NLC +R
Sbjct: 65 VEAVGPGVTGLAPGQRVAVNPSRPCGT-----CDYCRAGRPNLCLNMR------------ 107
Query: 122 KSRFSINGKPIYHFMGTST--------FSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP- 172
F+G++ F +Y VV + L P
Sbjct: 108 -------------FLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLR---RAALAEPL 151
Query: 173 -TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG 231
L AV N A G V V G G +G V A+ AGA+ ++ D+ A+ G
Sbjct: 152 AVALHAV-NRAGDLAGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMG 210
Query: 232 VTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 291
E VN G D FE G + + +AL G GT V VG+
Sbjct: 211 ADETVNLARDPLAAYAAD----KGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLG 265
Query: 292 SGQEISTRPFQLVTGR--VWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGE 349
+ P + + +G+ F+ + V I V +T L E
Sbjct: 266 GPVPL---PLNALVAKELDLRGS----FRFDDEFAEAVRLLAAGRIDVRPLITAVFPLEE 318
Query: 350 INEAFR 355
EAF
Sbjct: 319 AAEAFA 324
|
L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339 |
| >gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 117 bits (296), Expect = 2e-30
Identities = 83/281 (29%), Positives = 118/281 (41%), Gaps = 44/281 (15%)
Query: 18 DVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEV 77
+V P GEV IK+ +C +D + + G P +LGHE +G + VG V
Sbjct: 18 EVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGW 77
Query: 78 QPGDHVIPCYQAE-CRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFM 136
+ GD V+ C C +C+ G NLC R G +G
Sbjct: 78 KVGDRVVSETTFSTCGRCPYCRRGDYNLCPH-RKGIGTQA-----------DG------- 118
Query: 137 GTSTFSQYTVVHDVSVAKIDPQAPLDKVCL---LGCGVPTGLGAVWNTAKVEPGSIVAVF 193
F++Y +V + S+ ++ L+ L L V AV + + PG V VF
Sbjct: 119 ---GFAEYVLVPEESLHELPENLSLEAAALTEPLAVAV----HAVAERSGIRPGDTVVVF 171
Query: 194 GLGTVGLAVAEGAKAAGASRVI-GIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVD- 251
G G +GL A+ AK GA+ V+ G + D + D AK G D ++ L +
Sbjct: 172 GPGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGA-------DAVNGGEEDLAEL 224
Query: 252 ---LTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVG 288
+TDG G D EC G V + ALE KG G V VG
Sbjct: 225 VNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVG 264
|
This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306 |
| >gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Score = 117 bits (295), Expect = 5e-30
Identities = 102/367 (27%), Positives = 149/367 (40%), Gaps = 47/367 (12%)
Query: 3 KAAVAWEPNKPLV--IEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILG 60
+A V P V + D + P + I+++ T +C +D + + G P P +G
Sbjct: 2 RATVIHGPGDIRVEEVPDPVIEEP--TDAVIRVVATCVCGSDLWPYRGVSPTR-APAPIG 58
Query: 61 HEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 120
HE G+VE VG VT V+PGD VI + C FC++G T C
Sbjct: 59 HEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSC--------------- 103
Query: 121 RKSRFSINGKPIYHFMGTSTFSQYTVVH-DVSVAKIDPQAPLDKVCL-----LGCGVPTG 174
++G F+ V D ++ K+ D+ L L + TG
Sbjct: 104 ------VHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMGTG 157
Query: 175 LGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 234
A +A V PGS V V G G VGL AK GA R+I + + A+ FG T+
Sbjct: 158 HHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATD 216
Query: 235 FVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 293
V + ++ + +V +LT G G D EC+G M A+ G G VGV G
Sbjct: 217 IVAERG-EEAVARVR-ELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHGG 273
Query: 294 QEISTRP--FQLVTGRVWKGTAFGGFKS-RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEI 350
E+ R F+ V GG R +P L+D + I + L E+
Sbjct: 274 VELDVRELFFRNVGLA-------GGPAPVRRYLPELLDDVLAGRINPGRVFDLTLPLDEV 326
Query: 351 NEAFRYM 357
E +R M
Sbjct: 327 AEGYRAM 333
|
This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345 |
| >gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 116 bits (293), Expect = 8e-30
Identities = 66/222 (29%), Positives = 94/222 (42%), Gaps = 25/222 (11%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 62
KA + + IE+V P EV IK+ + LC+ D G P +P ILGHE
Sbjct: 2 KAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHE 61
Query: 63 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRK 122
G VE VGE V +PGD V A C++C+SG+ C K
Sbjct: 62 VVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYC----------------K 105
Query: 123 SRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTA 182
+R G+ + F F++Y V S+ K+ P + ++ C + A
Sbjct: 106 NRLGY-GEELDGF-----FAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGL-RRA 158
Query: 183 KVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK 223
V+ G V V G G VG+ + AKA GA +VI + K
Sbjct: 159 GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESK 199
|
Length = 334 |
| >gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Score = 110 bits (278), Expect = 9e-28
Identities = 75/311 (24%), Positives = 115/311 (36%), Gaps = 56/311 (18%)
Query: 3 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD-PEGLFPCIL 59
KA V E P L + +V P GEV +++ + D G P P I
Sbjct: 2 KAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIP 61
Query: 60 GHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 119
G EAAG+V +VG GVT + GD V G G
Sbjct: 62 GSEAAGVVVAVGSGVTGFKVGDRVAALGG--------------------VGRDGG----- 96
Query: 120 DRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVW 179
+++Y VV + + ++ L T A++
Sbjct: 97 ---------------------YAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALF 135
Query: 180 NTAKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238
+ A ++PG V V G G VG A + AKA GA V+ + +K + K G +N
Sbjct: 136 DRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVINY 194
Query: 239 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS 297
++ D + + +LT G GVD + +G A+L G G V +G + G +
Sbjct: 195 REED--FVEQVRELTGGKGVDVVLDTVGG-DTFAASLAALAPG-GRLVSIGALSGGPPVP 250
Query: 298 TRPFQLVTGRV 308
L+ R+
Sbjct: 251 LNLLPLLGKRL 261
|
Length = 326 |
| >gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH) | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 1e-27
Identities = 81/245 (33%), Positives = 115/245 (46%), Gaps = 32/245 (13%)
Query: 31 IKILFTALCHTDAYTWSGK--DPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQ 88
++I TA+C +D + + G+ GL +LGHEA G VE VG V ++ GD V+ +
Sbjct: 30 VRITTTAICGSDLHMYRGRTGAEPGL---VLGHEAMGEVEEVGSAVESLKVGDRVVVPFN 86
Query: 89 AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQ--YTV 146
C C+ CK G T +C V G Y MG Q Y
Sbjct: 87 VACGRCRNCKRGLTGVCLTVNPGRAGGAYG--------------YVDMGPYGGGQAEYLR 132
Query: 147 V--HDVSVAKIDPQAP----LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGL 200
V D ++ K+ + D + L PTG + A V+PG VAVFG G VGL
Sbjct: 133 VPYADFNLLKLPDRDGAKEKDDYLMLSDI-FPTGWHGL-ELAGVQPGDTVAVFGAGPVGL 190
Query: 201 AVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYS 260
A A GASRV +D P++ D A++ G ++ D D P++Q+L L GGVD +
Sbjct: 191 MAAYSAILRGASRVYVVDHVPERLDLAESIGA-IPIDFSDGD-PVEQIL-GLEPGGVDRA 247
Query: 261 FECIG 265
+C+G
Sbjct: 248 VDCVG 252
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375 |
| >gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 3e-27
Identities = 99/361 (27%), Positives = 147/361 (40%), Gaps = 42/361 (11%)
Query: 15 VIEDVQVAPPQAGEVRIKILFTALCHTDA--YTWSGKDPEGL-FPCILGHEAAGIVESVG 71
+ +V V P GEV IK+L T++C TD Y W + P ++GHE AG V +G
Sbjct: 12 ELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIG 71
Query: 72 EGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKP 131
GV ++ GD+V C +C C+ G+ ++C + GV D
Sbjct: 72 PGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVC---QNTKIFGV---DT---------- 115
Query: 132 IYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCL---LGCGVPTGLGAVWNTAKVEPGS 188
F++Y VV ++ K P + + LG V T L A G
Sbjct: 116 ------DGCFAEYAVVPAQNIWKNPKSIPPEYATIQEPLGNAVHTVL------AGPISGK 163
Query: 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQV 248
V V G G +GL AKA+GA VI D + + + AK G T VNP D + +
Sbjct: 164 SVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKED--VVKE 221
Query: 249 LVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGR 307
+ DLTDG GVD E G + L+ G G ++G+ I + G
Sbjct: 222 VADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPGKVTIDFTNKVIFKGL 280
Query: 308 VWKG-TAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCV 366
G T F++ V L+ + +D +TH + + F M G + +
Sbjct: 281 TIYGITGRHMFETWYTVSRLIQSGK---LDLDPIITHKFKFDKFEKGFELMRSGQTGKVI 337
Query: 367 L 367
L
Sbjct: 338 L 338
|
This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340 |
| >gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 2e-26
Identities = 90/310 (29%), Positives = 137/310 (44%), Gaps = 40/310 (12%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 62
KA EP PL + + V P GEV IK+ +CH+DA+ G P +P + GHE
Sbjct: 2 KAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHE 61
Query: 63 AAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLC--GKVRGATGAGVMMN 119
G +++VGEGV+ + GD V + + C C C+ G C GKV G T G
Sbjct: 62 VVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDG---- 117
Query: 120 DRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI-DPQAPLDKVCLLGCGVPTGLGAV 178
+++Y + ++A+I D + LL GV T A+
Sbjct: 118 --------------------GYAEYMLAPAEALARIPDDLDAAEAAPLLCAGV-TTFNAL 156
Query: 179 WNTAKVEPGSIVAVFGLGTVG-LAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237
N+ +PG +VAV G+G +G LAV + A G R + I K D A+ G +++
Sbjct: 157 RNS-GAKPGDLVAVQGIGGLGHLAV-QYAAKMGF-RTVAISRGSDKADLARKLGAHHYID 213
Query: 238 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS 297
D + L +L GG N + A + G +I+G A+G+ ++
Sbjct: 214 TSKEDVA--EALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILG--AAGEPVA 266
Query: 298 TRPFQLVTGR 307
P QL+ GR
Sbjct: 267 VSPLQLIMGR 276
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333 |
| >gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 2e-26
Identities = 81/357 (22%), Positives = 122/357 (34%), Gaps = 77/357 (21%)
Query: 14 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWS-GKDPE--GLFPCILGHEAAGIVESV 70
+E+ P G+V +++ +C +D ++ G+ P GHE G V ++
Sbjct: 7 FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVAL 66
Query: 71 GEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGK 130
G GV + GD V
Sbjct: 67 GPGVRGLAVGDRVA---------------------------------------------- 80
Query: 131 PIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCL---LGCGVPTGLGAVWNTAKVEPG 187
+ F++Y + + P + LGC + V+ + G
Sbjct: 81 ----GLSGGAFAEYDLADADHAVPL-PSLLDGQAFPGEPLGCAL-----NVFRRGWIRAG 130
Query: 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQ 247
VAV G G +GL + A AAGA RVI ID P + A+ G TE V D + +++
Sbjct: 131 KTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVV-TDDSEAIVER 189
Query: 248 VLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTG 306
V +LT G G D E +G+ + A E + G VI G G RP T
Sbjct: 190 V-RELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQDG----PRPVPFQTW 243
Query: 307 RVWKGTAFGGFKSRSQVPWL------VDKYMKKEIKVDEYVTHNMTLGEINEAFRYM 357
WKG R L V + + +TH L E+ +AF
Sbjct: 244 N-WKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAA 299
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312 |
| >gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 3e-26
Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 28/133 (21%)
Query: 26 AGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIP 85
GEV +++ +C +D + + G+ P P ILGHE AGIVE VG GVT ++ GD V+
Sbjct: 1 PGEVLVRVKAAGICGSDLHIYRGEPPPVKLPLILGHEGAGIVEEVGPGVTGLKVGDRVVV 60
Query: 86 CYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTS---TFS 142
C +C C+ G+ NLC P F+G F+
Sbjct: 61 YPLIPCGKCAACREGRENLC-------------------------PNGKFLGVHLDGGFA 95
Query: 143 QYTVVHDVSVAKI 155
+Y VV ++ +
Sbjct: 96 EYVVVPARNLVPL 108
|
This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108 |
| >gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 106 bits (268), Expect = 3e-26
Identities = 65/221 (29%), Positives = 98/221 (44%), Gaps = 33/221 (14%)
Query: 3 KAAVAWEPNK----PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCI 58
KA V +P PL + +V V P GEV IK+ +C TD + G P P I
Sbjct: 2 KAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLI 61
Query: 59 LGHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 117
GHE G VE+VG GVT GD V +P + C EC++C+SG+ NLC R TG
Sbjct: 62 PGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNAR-FTG---- 116
Query: 118 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA 177
++++G +++Y V + I ++ L C G A
Sbjct: 117 -------YTVDGG----------YAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRA 159
Query: 178 VWNTAKVEPGSIVAVFGLGTVG-----LAVAEGAKAAGASR 213
+ A ++PG + ++G G +A +GA+ +R
Sbjct: 160 L-KLAGLKPGQRLGLYGFGASAHLALQIARYQGAEVFAFTR 199
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329 |
| >gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 104 bits (263), Expect = 2e-25
Identities = 82/293 (27%), Positives = 122/293 (41%), Gaps = 53/293 (18%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD-------PEGLF 55
KA V + L + DV V P +V IK+ TA+C TD + ++ +
Sbjct: 2 KALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPV---- 57
Query: 56 PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAE----CRECKFCKSGKTNLCGKVRGA 111
P ++GHE G V VG VT + GD V E C C+ C++G+ +LC R
Sbjct: 58 PMVVGHEFVGEVVEVGSEVTGFKVGDRV----SGEGHIVCGHCRNCRAGRRHLC---RNT 110
Query: 112 TGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCL---LG 168
G GV +R G F++Y V+ +V KI P D + G
Sbjct: 111 KGVGV---NR------PG----------AFAEYLVIPAFNVWKIPDDIPDDLAAIFDPFG 151
Query: 169 CGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 228
V T L ++ G V + G G +G+ A AK GA V+ D++ + + A+
Sbjct: 152 NAVHTALS--FDLV----GEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELAR 205
Query: 229 NFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKG 280
G T VN D ++ V+ +L G D E G S R L+ + G
Sbjct: 206 KMGATRAVNVAKED--LRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG 256
|
Length = 341 |
| >gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase | Back alignment and domain information |
|---|
Score = 99.3 bits (248), Expect = 2e-25
Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 5/133 (3%)
Query: 198 VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-G 256
VGLA + AKA GA+RVI +D +K + AK G +N +D D + + +LT G G
Sbjct: 2 VGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYRDED--FVERVRELTGGRG 59
Query: 257 VDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGG 316
VD +C+G + + ALE G G V+VG+ L+ G+ GG
Sbjct: 60 VDVVIDCVGAPATLEQALELLRPG-GRVVVVGLPGGAPVPFPLRDLLLKELTILGSLGGG 118
Query: 317 -FKSRSQVPWLVD 328
+ + L
Sbjct: 119 REEFEEALELLAS 131
|
Length = 131 |
| >gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 101 bits (252), Expect = 7e-24
Identities = 93/362 (25%), Positives = 148/362 (40%), Gaps = 43/362 (11%)
Query: 14 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL--------FPCILGHEAAG 65
L +EDV V + E+ I++ +C +D + + D +G FP ++GHE +G
Sbjct: 39 LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYE-TDKDGYILYPGLTEFPVVIGHEFSG 97
Query: 66 IVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 125
+VE G+ V + GD V C C+ C+SG N C N ++ F
Sbjct: 98 VVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHC------------KNLKELGF 145
Query: 126 SINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL---DKVCLLGCGV-PTGL---GAV 178
S +G F++Y V+ +I+ + DK G V PT + G
Sbjct: 146 SADG----------AFAEYIAVNARYAWEINELREIYSEDKAFEAGALVEPTSVAYNGLF 195
Query: 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238
PG+ V V+G G +GLA AKAAGAS+VI +I ++ + AK G NP
Sbjct: 196 IRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNP 255
Query: 239 -KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI 296
K D + ++++T G G D E G +E G V +G AA+ +
Sbjct: 256 TKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPL 315
Query: 297 STRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRY 356
Q+ ++ G P ++ +I + + +T L I EA +
Sbjct: 316 HLEVLQVRRAQIVGAQGHSGH---GIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKA 372
Query: 357 MH 358
Sbjct: 373 AS 374
|
This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384 |
| >gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like | Back alignment and domain information |
|---|
Score = 99 bits (250), Expect = 1e-23
Identities = 87/384 (22%), Positives = 125/384 (32%), Gaps = 83/384 (21%)
Query: 3 KAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
KAAV P LV+ DV V P EV +K+ AL D +P ILG
Sbjct: 2 KAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGFI-PSYPAILGC 60
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
+ AG V VG GVT + GD V G N
Sbjct: 61 DFAGTVVEVGSGVTRFKVGDRVA----------------------------GFVHGGNPN 92
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT-------- 173
R F +Y V AKI ++ L G+ T
Sbjct: 93 DPR-------------NGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQK 139
Query: 174 -GLGAVW-NTAKVEPGSIVAVFGLGT-VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF 230
GL + G V ++G + VG + AK AG +VI PK FD K+
Sbjct: 140 LGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITT-ASPKNFDLVKSL 197
Query: 231 GVTEFVNPKD-HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 289
G D HD + + + T G + Y+ +CI + E +G
Sbjct: 198 GADAVF---DYHDPDVVEDIRAATGGKLRYALDCISTPESAQLCAE----------ALGR 244
Query: 290 AASGQEISTRPFQLVTGR--------VWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYV 341
+ G+ +S P T V T FG + + KY+ + ++ +
Sbjct: 245 SGGGKLVSLLPVPEETEPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLK 304
Query: 342 THNMT-----LGEINEAFRYMHGG 360
H + L + E + G
Sbjct: 305 PHPVRVVEGGLEGVQEGLDLLRKG 328
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339 |
| >gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members | Back alignment and domain information |
|---|
Score = 97.7 bits (244), Expect = 2e-23
Identities = 73/327 (22%), Positives = 113/327 (34%), Gaps = 81/327 (24%)
Query: 54 LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 113
P G+ + G V VG GVT +PGD V FC
Sbjct: 19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRV------------FC---------------- 50
Query: 114 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 173
G ++ VV + + P ++ L T
Sbjct: 51 ----------------------FGPH--AERVVVPANLLVPLPDGLPPERAALTALA-AT 85
Query: 174 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 233
L V + A+ G VAV GLG VGL A+ AKAAGA V+G+D D + + A+ G
Sbjct: 86 ALNGVRD-AEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPA 144
Query: 234 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 293
+ V D ++ G D E G+ S + AL G V+VG
Sbjct: 145 DPVAADTAD--------EIGGRGADVVIEASGSPSALETALRLLRDR-GRVVLVGWYGLK 195
Query: 294 QEISTRPF-----QLVTGRVWKGTAFGGFKSRSQVPWLVDKYM------KKEIKVDEYVT 342
+ F + + +V+ W + + E +++ +T
Sbjct: 196 PLLLGEEFHFKRLPIRSSQVYGIGR-----YDRPRRWTEARNLEEALDLLAEGRLEALIT 250
Query: 343 HNMTLGEINEAFRYM--HGGDCLRCVL 367
H + + EA+R + +CL+ VL
Sbjct: 251 HRVPFEDAPEAYRLLFEDPPECLKVVL 277
|
This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277 |
| >gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional | Back alignment and domain information |
|---|
Score = 99.0 bits (247), Expect = 2e-23
Identities = 79/266 (29%), Positives = 120/266 (45%), Gaps = 45/266 (16%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK--DPEGLFPCILG 60
KAAV + + V+ + + P + GE +K+ + +CHTD + +G D G ILG
Sbjct: 2 KAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGDKTG---RILG 58
Query: 61 HEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 119
HE GIV+ VG GVT ++ GD V I + C C++C +G+ LC V+ A
Sbjct: 59 HEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAG------- 111
Query: 120 DRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVA---KIDPQAPLDKVCLLGCGVPTGLG 176
++++G M Q V D +V +DP C GV T
Sbjct: 112 -----YTVDGG-----MAE----QCIVTADYAVKVPEGLDPAQASSITC---AGV-TTYK 153
Query: 177 AVWNTAKVEPGSIVAVFGLGTVG-LAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 235
A+ + ++PG +A++G G +G LA+ A +VI +DI+ K AK G
Sbjct: 154 AI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLT 211
Query: 236 VNPK---DHDKPIQQVLVDLTDGGVD 258
+N K D K IQ+ GG
Sbjct: 212 INSKRVEDVAKIIQE-----KTGGAH 232
|
Length = 338 |
| >gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 95.3 bits (237), Expect = 5e-22
Identities = 66/234 (28%), Positives = 103/234 (44%), Gaps = 42/234 (17%)
Query: 28 EVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHV---- 83
+V +K+ + LC +D +P LGHE +G VE+VG GV ++ PGD V
Sbjct: 27 DVLVKVASSGLCGSDIPRIFKNGAH-YYPITLGHEFSGYVEAVGSGVDDLHPGDAVACVP 85
Query: 84 -IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTF- 141
+PC+ C C G +LC K Y F+G+
Sbjct: 86 LLPCFT-----CPECLRGFYSLCAK-------------------------YDFIGSRRDG 115
Query: 142 --SQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVG 199
++Y VV ++ + P++ + + GL A ++ A+ G V + G GT+G
Sbjct: 116 GNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHA-FHLAQGCEGKNVIIIGAGTIG 173
Query: 200 LAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKP-IQQVLVDL 252
L + A A GA V IDI+ +K AK+ G + N ++ P IQ VL +L
Sbjct: 174 LLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREMSAPQIQSVLREL 227
|
Length = 347 |
| >gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Score = 92.3 bits (229), Expect = 6e-21
Identities = 77/233 (33%), Positives = 110/233 (47%), Gaps = 20/233 (8%)
Query: 9 EPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTD-AYTWSGKDPEGLFPCILGHEAAGIV 67
EP KP+V V++ AG+V +K+ +CHTD +Y + G P LGHE +G V
Sbjct: 6 EPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRV 65
Query: 68 ESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSI 127
G G G VI C EC+ CK+G+ +C R G ND + F+
Sbjct: 66 IQAGAG-AASWIGKAVIVPAVIPCGECELCKTGRGTIC---RAQKMPG---NDMQGGFA- 117
Query: 128 NGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPG 187
H + + VV + +A PL+ V ++ V T A A ++ G
Sbjct: 118 -----SHIVVPAKG--LCVVDEARLAAAG--LPLEHVSVVADAVTTPYQAAVQ-AGLKKG 167
Query: 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240
+V V G G VG + + AKA GA+ V+ IDIDP+K + K FG +NPKD
Sbjct: 168 DLVIVIGAGGVGGYMVQTAKAMGAA-VVAIDIDPEKLEMMKGFGADLTLNPKD 219
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349 |
| >gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Score = 91.8 bits (228), Expect = 1e-20
Identities = 95/360 (26%), Positives = 143/360 (39%), Gaps = 55/360 (15%)
Query: 12 KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAY---TWSGKDPEGLFPCILGHEAAGIVE 68
L I+ ++ P +VR+++ +C +D + T D P ++GHE AGI+E
Sbjct: 27 NTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIE 86
Query: 69 SVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSIN 128
VG V + GD V C C CK G+ NLC
Sbjct: 87 EVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLC----------------------- 123
Query: 129 GKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCL--------LGCGVPTGLGAVWN 180
P F T V A + + P + V L L GV
Sbjct: 124 --PEMKFFATPPVHGSLANQVVHPADLCFKLP-ENVSLEEGAMCEPLSVGVHA-----CR 175
Query: 181 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV---- 236
A + P + V V G G +GL A+A GA R++ +D+D ++ AK G E V
Sbjct: 176 RANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVST 235
Query: 237 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI 296
N +D + ++++ + GG+D SF+C+G M ALE G G +VG+ G
Sbjct: 236 NIEDVESEVEEIQKAMG-GGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGM---GHNE 290
Query: 297 STRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLG--EINEAF 354
T P R + G F+ R+ P ++ +I V +TH E+ EAF
Sbjct: 291 MTVPLTPAAAR--EVDVVGVFRYRNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAF 348
|
Length = 364 |
| >gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases | Back alignment and domain information |
|---|
Score = 90.3 bits (225), Expect = 2e-20
Identities = 62/281 (22%), Positives = 93/281 (33%), Gaps = 67/281 (23%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQA--GEVRIKILFTALCHTDAYTWSG---KDPEGLFPC 57
KA E P V+E V P+ GEV +K+ + D G P
Sbjct: 2 KAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPL 61
Query: 58 ILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 117
I GH+ AG+V +VG GVT + GD V
Sbjct: 62 IPGHDVAGVVVAVGPGVTGFKVGDEVF--------------------------------- 88
Query: 118 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP----T 173
G + G +++Y VV +A + +P T
Sbjct: 89 -----------GMTPFTRGG--AYAEYVVVPADELALKPANLSFE----EAAALPLAGLT 131
Query: 174 GLGAVWNTAKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 232
A++ ++ G V + G G VG + AKA GA RVI D ++ G
Sbjct: 132 AWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIAT-ASAANADFLRSLGA 189
Query: 233 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAA 273
E ++ D GGVD + +G ++ R+
Sbjct: 190 DEVIDYTKGD-----FERAAAPGGVDAVLDTVGGETLARSL 225
|
Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309 |
| >gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 89.5 bits (223), Expect = 4e-20
Identities = 82/316 (25%), Positives = 129/316 (40%), Gaps = 47/316 (14%)
Query: 14 LVIEDVQVAPPQAGEVRIKILFTALCHTDAY----TWSGKDPEGLFPCILGHEAAGIVES 69
L + + V P GEV +++ +L + D + + L P + AG V +
Sbjct: 15 LKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPL---SDGAGEVVA 71
Query: 70 VGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSING 129
VGEGVT + GD V+P + L G A + I+G
Sbjct: 72 VGEGVTRFKVGDRVVPTFFP------------NWLDGPPTAEDEASAL------GGPIDG 113
Query: 130 KPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGC-GVPTGLGAVWNTAKVEPGS 188
++Y V+ + + + ++ L C G+ T A++ ++PG
Sbjct: 114 ----------VLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGL-TAWNALFGLGPLKPGD 162
Query: 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQV 248
V V G G V L + AKAAGA RVI +K +RAK G +N + ++V
Sbjct: 163 TVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYRTTPDWGEEV 221
Query: 249 LVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGR 307
L LT G GVD+ E +G + +++ G G ++G SG E L+T
Sbjct: 222 L-KLTGGRGVDHVVE-VGGPGTLAQSIKAVAPG-GVISLIGF-LSGFEAPVLLLPLLTKG 277
Query: 308 -VWKGTAFGGFKSRSQ 322
+G A G SR+Q
Sbjct: 278 ATLRGIAVG---SRAQ 290
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336 |
| >gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Score = 87.9 bits (219), Expect = 1e-19
Identities = 100/369 (27%), Positives = 144/369 (39%), Gaps = 73/369 (19%)
Query: 3 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL-FPCIL 59
KA V E P LV+E+V P GEVRI++ + D GK P +
Sbjct: 2 KAVVCKELGGPEDLVLEEVPPEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVP 61
Query: 60 GHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 119
G E AG+VE+VGEGVT + GD V+ TG G
Sbjct: 62 GSEVAGVVEAVGEGVTGFKVGDRVV-------------------------ALTGQG---- 92
Query: 120 DRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVW 179
F++ VV +V + ++ L T A+
Sbjct: 93 --------------------GFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALV 132
Query: 180 NTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238
A+++PG V V G G VGLA + AKA GA RVI +K A+ G ++
Sbjct: 133 RRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVIDY 191
Query: 239 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS 297
D +++ + LT G GVD ++ +G V A+L G G +++G ASG EI
Sbjct: 192 --RDPDLRERVKALTGGRGVDVVYDPVGG-DVFEASLRSLAWG-GRLLVIG-FASG-EIP 245
Query: 298 TRPFQL-------VTGRVWKGTAFGGFKSRSQVPW--LVDKYMKKEIKVDEYVTHNMTLG 348
P L V G V+ G + L D + E K+ +V+ L
Sbjct: 246 QIPANLLLLKNISVVG-VYWGAYARREPELLRANLAELFD--LLAEGKIRPHVSAVFPLE 302
Query: 349 EINEAFRYM 357
+ EA R +
Sbjct: 303 QAAEALRAL 311
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323 |
| >gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 85.2 bits (211), Expect = 2e-18
Identities = 88/367 (23%), Positives = 149/367 (40%), Gaps = 63/367 (17%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 62
K+ V +PN L IE+ + P AGEVR+K+ +C +D++ + G +P +P ++GHE
Sbjct: 2 KSIVIEKPNS-LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHE 60
Query: 63 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRK 122
G++++VGEGV + G+ V C C C GK N+C
Sbjct: 61 FFGVIDAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVC----------------- 103
Query: 123 SRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGV---PTGLGA-V 178
+ + G H G FS+Y VV + +I P A D+ V P + A V
Sbjct: 104 TSLVVLG---VHRDG--GFSEYAVVPAKNAHRI-PDAIADQ-----YAVMVEPFTIAANV 152
Query: 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEFVN 237
+ ++G G VGL + + K VI D ++ AK G +N
Sbjct: 153 TGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVIN 212
Query: 238 PKDHDKPIQQVLVDLTDGGVDYS--FECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE 295
P+ + L + G+ + + + S++ A V +A+
Sbjct: 213 NAQE--PLGEA---LEEKGIKPTLIIDAACHPSILEEA-------------VTLASPAAR 254
Query: 296 I-----STRPFQLVTGRVWKGTAFGGFKSR---SQVPWLVDKYMKKEIKVDEYVTHNMTL 347
I S+ P ++V + G F SR ++ P ++D K I ++ +TH
Sbjct: 255 IVLMGFSSEPSEIVQQGI-TGKELSIFSSRLNANKFPVVIDWLSKGLIDPEKLITHTFDF 313
Query: 348 GEINEAF 354
+ +A
Sbjct: 314 QHVADAI 320
|
Length = 339 |
| >gnl|CDD|234025 TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenase, glutathione-independent | Back alignment and domain information |
|---|
Score = 84.9 bits (210), Expect = 3e-18
Identities = 78/245 (31%), Positives = 114/245 (46%), Gaps = 25/245 (10%)
Query: 29 VRIKILFTALCHTDAYTWSGKD--PEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPC 86
V +K++ T +C +D + G+ P GL +LGHE G V G V ++ GD V
Sbjct: 36 VILKVVTTNICGSDQHMVRGRTTAPTGL---VLGHEITGEVIEKGRDVEFIKIGDIVSVP 92
Query: 87 YQAECRECKFCKSGKTNLCGKVR----GATGAGVMMNDRKSRFSINGKPIYHFMGTSTFS 142
+ C C+ CK G T +C V GA V M + G+ Y + + F+
Sbjct: 93 FNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGW-----VGGQSEYVMVPYADFN 147
Query: 143 QYTVV-HDVSVAKIDPQAPLDKVCLLGCGVPTGL-GAVWNTAKVEPGSIVAVFGLGTVGL 200
D ++ KI D L PTG GAV TA V PGS V + G G VGL
Sbjct: 148 LLKFPDRDQALEKI-----RDLTMLSDI-FPTGYHGAV--TAGVGPGSTVYIAGAGPVGL 199
Query: 201 AVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYS 260
A A A+ GA+ VI D++P + +A++FG E V+ +Q+ L + VD +
Sbjct: 200 AAAASAQLLGAAVVIVGDLNPARLAQARSFGC-ETVDLSKDATLPEQIEQILGEPEVDCA 258
Query: 261 FECIG 265
+C+G
Sbjct: 259 VDCVG 263
|
Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent [Central intermediary metabolism, One-carbon metabolism]. Length = 393 |
| >gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 84.0 bits (208), Expect = 4e-18
Identities = 97/383 (25%), Positives = 150/383 (39%), Gaps = 65/383 (16%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSG---------KDPEG 53
+A V P + +E+V V P GE+ +K+ +C D + G + P
Sbjct: 2 RAVVCHGP-QDYRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYV 60
Query: 54 LFPCILGHEAAGIVESVGEGVTE--VQPGDHVIPCYQAECRECKFCKSG------KTNLC 105
P I GHE G V +GEG E V+ GD VI C C+FC G K +L
Sbjct: 61 KPPMIPGHEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLY 120
Query: 106 GKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVC 165
G G + +M F + +VH K+ P +
Sbjct: 121 GFQNNVNGG-----------------MAEYM---RFPKEAIVH-----KVPDDIPPEDAI 155
Query: 166 L---LGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 222
L L C L AV + A ++ +V + G G +GL + A+ ++I +D+ +
Sbjct: 156 LIEPLACA----LHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDE 210
Query: 223 KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGW 281
+ A+ FG +NP + D ++++ +LT G G D E G+ S + L K
Sbjct: 211 RLALARKFGADVVLNPPEVDV-VEKIK-ELTGGYGCDIYIEATGHPSAVEQGLNMIRK-L 267
Query: 282 GTSVIVGVAASGQEISTRPFQLVTGRV---WKGTAFGGFKSRSQVPWLVDKYMKKEIKVD 338
G V V G + T + ++ R G+ G + P +D + D
Sbjct: 268 GRFVEFSVF--GDPV-TVDWSIIGDRKELDVLGSHLGPYCY----PIAIDLIASGRLPTD 320
Query: 339 EYVTHNMTLGEINEAFRYMHGGD 361
VTH L + EAF M GD
Sbjct: 321 GIVTHQFPLEDFEEAFELMARGD 343
|
This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350 |
| >gnl|CDD|132409 TIGR03366, HpnZ_proposed, putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 81.8 bits (202), Expect = 1e-17
Identities = 61/254 (24%), Positives = 98/254 (38%), Gaps = 27/254 (10%)
Query: 58 ILGHEAAGIVESVGEGVTE------VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGA 111
+LGHE G V ++ G T ++ G V+ C C C+ G C +R
Sbjct: 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKY 60
Query: 112 TGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTV-VHDVSVAKIDPQAPLDKVCLLGCG 170
+ ++++ ++ + P GC
Sbjct: 61 GHE---------ALDSGWPL------SGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCA 105
Query: 171 VPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF 230
T + A+ ++ G V V G G +GL A A AAGA+RV+ D P + + A +F
Sbjct: 106 TATVMAALEAAGDLK-GRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELALSF 164
Query: 231 GVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290
G T P + ++ GVD + E G + +RA LE G GT+V+ G
Sbjct: 165 GATALAEP---EVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAGSV 220
Query: 291 ASGQEISTRPFQLV 304
G ++ P Q+V
Sbjct: 221 FPGGPVALDPEQVV 234
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. Length = 280 |
| >gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Score = 81.3 bits (202), Expect = 3e-17
Identities = 75/271 (27%), Positives = 106/271 (39%), Gaps = 68/271 (25%)
Query: 14 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 73
L EDV V P GEV ++ + D Y SG P L P +LG E AG+VE+VG G
Sbjct: 14 LEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPLPL-PFVLGVEGAGVVEAVGPG 72
Query: 74 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIY 133
VT + GD V Y
Sbjct: 73 VTGFKVGDRV--AY---------------------------------------------- 84
Query: 134 HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKV---CLLGCGVPTGLGA---VWNTAKVEPG 187
+++Y VV + K+ P D+ LL GL A + T V+PG
Sbjct: 85 -AGPPGAYAEYRVVPASRLVKL-PDGISDETAAALLL-----QGLTAHYLLRETYPVKPG 137
Query: 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQ 246
V V G VGL + + AKA GA VIG +K + A+ G +N +D D +
Sbjct: 138 DTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYRDEDFV-E 195
Query: 247 QVLVDLTDG-GVDYSFECIGNVSVMRAALEC 276
+V ++T G GVD ++ +G +L+
Sbjct: 196 RVR-EITGGRGVDVVYDGVG-KDTFEGSLDS 224
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320 |
| >gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 81.2 bits (201), Expect = 4e-17
Identities = 69/294 (23%), Positives = 110/294 (37%), Gaps = 51/294 (17%)
Query: 11 NKPLVIEDVQVAPPQAGEVRIKILFTALCHTD----------AYTWSGKDPEGLF-PCIL 59
+ PLV+ DV P G+V +K+L +C +D G L +L
Sbjct: 8 DGPLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVL 67
Query: 60 GHEAAGIVESVGEGV-TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 118
GHE G V G G +++ G V C + C G + A G
Sbjct: 68 GHEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSP------EAPGG---- 117
Query: 119 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 178
+++Y ++ + + ++ ++ L + GL AV
Sbjct: 118 ----------------------YAEYMLLSEALLLRVPDGLSMEDAALTE-PLAVGLHAV 154
Query: 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238
A++ PG + V G G +GLAV KA G ++ D P++ A G V+P
Sbjct: 155 -RRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDP 213
Query: 239 KDHDKPIQQVLVDLTDGGV---DYSFECIGNVSVMRAALECCHKGWGTSVIVGV 289
D P +L G FEC+G +++ +E G G V+VGV
Sbjct: 214 AA-DSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGV 265
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341 |
| >gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Score = 80.7 bits (200), Expect = 4e-17
Identities = 86/368 (23%), Positives = 135/368 (36%), Gaps = 68/368 (18%)
Query: 3 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILG 60
KA V +P P L + ++ + P+ G V I++ L ++ +T G P FP +LG
Sbjct: 2 KAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLG 61
Query: 61 HEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 120
EA G VE G PG V AT G M
Sbjct: 62 IEAVGEVEEAPGG--TFTPGQRV---------------------------ATAMGGMG-- 90
Query: 121 RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN 180
+ +G ++++YT+V + V ID ++ L T G+++
Sbjct: 91 ----RTFDG----------SYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFR 136
Query: 181 TAKVEPGSIVAVFGLGT--VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVN 237
+ ++PG + + G GT VGLA + AKA GA V P++ K G E ++
Sbjct: 137 SLGLQPGDTLLIRG-GTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID 194
Query: 238 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS 297
+ ++ GG D E +G ++ + +L G G + G+ GQ
Sbjct: 195 DGAIAEQLRAA-----PGGFDKVLELVGTATL-KDSLRHLRPG-GIVCMTGLLG-GQWTL 246
Query: 298 TR--PFQLVTGRVWKGTAFGGFKSR-SQVP--WLVDKYMKKEIKVDEYVTHNMTLGEINE 352
P + V T G Q P L D + + + T EI E
Sbjct: 247 EDFNPMDDIPSGV-NLTLTGSSSGDVPQTPLQELFDFVAAGHLDI--PPSKVFTFDEIVE 303
Query: 353 AFRYMHGG 360
A YM
Sbjct: 304 AHAYMESN 311
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320 |
| >gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Score = 75.3 bits (186), Expect = 3e-15
Identities = 67/293 (22%), Positives = 106/293 (36%), Gaps = 56/293 (19%)
Query: 14 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK-DPEGLFPCILGHEAAGIVESVGE 72
L + D+ V P GEV +++ + + D Y +G P + G + AG+VE+VGE
Sbjct: 15 LRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGE 74
Query: 73 GVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPI 132
GV ++ GD V + + G
Sbjct: 75 GVDGLKVGDRV------------WLTNLGWG------RRQG------------------- 97
Query: 133 YHFMGTSTFSQYTVVHDVSVAKIDPQAPLDK-VCLLGCGVP--TGLGAVWNTAKVEPGSI 189
T ++Y VV + + ++ L G+P T A+++ A + G
Sbjct: 98 -------TAAEYVVVPADQLVPLPDGVSFEQGAAL---GIPALTAYRALFHRAGAKAGET 147
Query: 190 VAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQV 248
V V G G VG A + A+ AGA RVI + + + G N + D ++
Sbjct: 148 VLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFNYRAED-LADRI 205
Query: 249 LVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
L GVD E + NV + L+ G G V+ G I P
Sbjct: 206 LAATAGQGVDVIIEVLANV-NLAKDLDVLAPG-GRIVVYGSGGLRGTIPINPL 256
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325 |
| >gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 75.3 bits (185), Expect = 4e-15
Identities = 90/340 (26%), Positives = 136/340 (40%), Gaps = 40/340 (11%)
Query: 28 EVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHV-IPC 86
+V +KIL+ +CH+D +T + +P + GHE GIV +G+ V + + GD V +
Sbjct: 39 DVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGV 98
Query: 87 YQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYT- 145
C+ C+ C N C K M+ F+ N I H GT + Y+
Sbjct: 99 IVGSCKSCESCDQDLENYCPK---------MI------FTYNS--IGH-DGTKNYGGYSD 140
Query: 146 --VVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVA 203
VV V + PLD L C T + EPG + V GLG +G
Sbjct: 141 MIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAV 200
Query: 204 EGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE 262
+ KA G +V I K D A G F+ D +K + G +DY +
Sbjct: 201 KIGKAFGL-KVTVISSSSNKEDEAINRLGADSFLVSTDPEK------MKAAIGTMDYIID 253
Query: 263 CIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGR-VWKGTAFGGFKSRS 321
+ V + L K G + +G+ E+ F LV GR + G+ GG K
Sbjct: 254 TVSAVHAL-GPLLGLLKVNGKLITLGLPEKPLELPI--FPLVLGRKLVGGSDIGGIKETQ 310
Query: 322 QVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
+ ++D K I D + + + EIN A + D
Sbjct: 311 E---MLDFCAKHNITADIEL---IRMDEINTAMERLAKSD 344
|
Length = 360 |
| >gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 73.5 bits (181), Expect = 1e-14
Identities = 61/218 (27%), Positives = 91/218 (41%), Gaps = 28/218 (12%)
Query: 3 KAAVAWEPN--KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILG 60
A+ +E + + L +EDV+ P GEV I++ + D + + + P I G
Sbjct: 1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVKVKPM-PHIPG 59
Query: 61 HEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 120
E AG+VE VG+ V V+ GD V+ + C C SG LC R GV+ N
Sbjct: 60 AEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLC---RNGGIIGVVSN- 115
Query: 121 RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN 180
+++Y VV + ++ KI + L T A+
Sbjct: 116 ------------------GGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHAL-K 156
Query: 181 TAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI 217
TA + PG V VFG G G+ + AK GA VI +
Sbjct: 157 TAGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAV 193
|
This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325 |
| >gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 71.5 bits (176), Expect = 7e-14
Identities = 32/71 (45%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 14 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGE 72
L IE++ V P AGEV I++ L DA G E P LG+EAAG+VE+VG
Sbjct: 15 LRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGA 74
Query: 73 GVTEVQPGDHV 83
GVT GD V
Sbjct: 75 GVTGFAVGDRV 85
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328 |
| >gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 68.8 bits (169), Expect = 4e-13
Identities = 78/357 (21%), Positives = 125/357 (35%), Gaps = 75/357 (21%)
Query: 17 EDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL---FPCILGHEAAGIVESVGEG 73
+V + P+ GEV +K+ ++ D G L FP I G + AG V +VG G
Sbjct: 17 VEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSG 76
Query: 74 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIY 133
VT + GD V G+ G
Sbjct: 77 VTRFKVGDEVF---------------GRLPPKG--------------------------- 94
Query: 134 HFMGTSTFSQYTVVHDVSVAKIDPQ-APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAV 192
G ++Y V + +AK + + L G+ T L A+ + KV+PG V +
Sbjct: 95 --GG--ALAEYVVAPESGLAKKPEGVSFEEAAALPVAGL-TALQALRDAGKVKPGQRVLI 149
Query: 193 FGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVD 251
G G VG + AKA GA V G+ + + ++ G E ++ D +
Sbjct: 150 NGASGGVGTFAVQIAKALGA-HVTGVCS-TRNAELVRSLGADEVIDYTTED-----FVAL 202
Query: 252 LTDGGV-DYSFECIGNVSVMRAALECCH--KGWGTSVIVGVAASGQ---EISTRPFQLVT 305
G D F+ +GN + K G V VG SG +
Sbjct: 203 TAGGEKYDVIFDAVGNSP--FSLYRASLALKPGGRYVSVGGGPSGLLLVLLLLPLTLGGG 260
Query: 306 GRVWKGTAFGGFKSRSQVPWLVDKYMKKEIK--VDEYVTHNMTLGEINEAFRYMHGG 360
GR + F + + L + + ++K +D + L + EA+R + G
Sbjct: 261 GR--RLKFFLAKPNAEDLEQLAELVEEGKLKPVIDS--VY--PLEDAPEAYRRLKSG 311
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319 |
| >gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 67.4 bits (165), Expect = 1e-12
Identities = 59/249 (23%), Positives = 93/249 (37%), Gaps = 50/249 (20%)
Query: 56 PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAG 115
P +LGHE G + + ++ G V C CK+C S N C +R
Sbjct: 60 PMVLGHEVIGKIVHSDS--SGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMR------ 111
Query: 116 VMMNDRKSRFSINGKPIYHFMGTST--------FSQYTVVHDVSVAKIDPQAPLDKVCLL 167
F G++ F++Y VV +A +KV +
Sbjct: 112 -------------------FFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKAD-EKV--M 149
Query: 168 GCGVPTGLGAVWNTAKVEPGSI----VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK 223
P AV A + G + V V G+G +G + K GA+ ++ D+ P+
Sbjct: 150 AFAEPL---AVAIHAAHQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRS 206
Query: 224 FDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGT 283
A+ G + VNP++ D + G D SFE G+ S + LE + G
Sbjct: 207 LSLAREMGADKLVNPQNDDLDHYKA----EKGYFDVSFEVSGHPSSINTCLEVT-RAKGV 261
Query: 284 SVIVGVAAS 292
V VG+ +
Sbjct: 262 MVQVGMGGA 270
|
Length = 343 |
| >gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 65.8 bits (161), Expect = 5e-12
Identities = 63/270 (23%), Positives = 102/270 (37%), Gaps = 58/270 (21%)
Query: 2 CKAAVAWEPNKPLVIEDVQVA--PPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCIL 59
KA V +P L + ++ P AGEV +K+ L D + P +P +
Sbjct: 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVP 60
Query: 60 GHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 119
G + AG+V +VG VT + GD V
Sbjct: 61 GVDGAGVVVAVGAKVTGWKVGDRV------------------------------------ 84
Query: 120 DRKSRFSINGKPIYHFMGTS--TFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA 177
YH +F++YTVV +V + ++ L C T A
Sbjct: 85 ------------AYHASLARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQA 132
Query: 178 VWNTAKVEPG-SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 236
++ ++E G +I+ G G VG + AK AG RVI + F+ K+ G +
Sbjct: 133 LFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVI-TTCSKRNFEYVKSLGADHVI 190
Query: 237 NPKDHDKPIQQVLVDLTDG-GVDYSFECIG 265
+ D D + + + ++T G GVD + +G
Sbjct: 191 DYNDED--VCERIKEITGGRGVDAVLDTVG 218
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325 |
| >gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 64.9 bits (159), Expect = 1e-11
Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQ--AGEVRIKILFTALCHTDAYTWSGKDPEGL-FPCIL 59
KA V P V E +V PQ G+V +++ + + D G P IL
Sbjct: 2 KALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAIL 61
Query: 60 GHEAAGIVESVGEGVTEVQPGDHVIPCYQ 88
G + AG+VE+VGEGVT + GD V C
Sbjct: 62 GCDVAGVVEAVGEGVTRFRVGDEVYGCAG 90
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326 |
| >gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 64.6 bits (158), Expect = 1e-11
Identities = 66/288 (22%), Positives = 102/288 (35%), Gaps = 74/288 (25%)
Query: 5 AVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAA 64
A+ + L +ED+ P GE +++L +C+TD + G P FP + GHE
Sbjct: 3 ALVLDGGLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFV 59
Query: 65 GIVESVGEG-------VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 117
GIVE E V E+ C C++C+ G C
Sbjct: 60 GIVEEGPEAELVGKRVVGEI----------NIACGRCEYCRRGLYTHC------------ 97
Query: 118 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTG--- 174
++ I + F++Y PL+ + ++ VP
Sbjct: 98 --PNRTVLGIVDRD-------GAFAEYLT------------LPLENLHVVPDLVPDEQAV 136
Query: 175 ----LGAVWNT---AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 227
L A + PG VAV G G +GL +A+ G V+ + +K A
Sbjct: 137 FAEPLAAALEILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALA 195
Query: 228 KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALE 275
+ GV E V P + + GG D E G+ S + AL
Sbjct: 196 RRLGV-ETVLPDE---------AESEGGGFDVVVEATGSPSGLELALR 233
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319 |
| >gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase | Back alignment and domain information |
|---|
Score = 63.4 bits (155), Expect = 4e-11
Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 15/126 (11%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTD------AYTWSGKDPEGLFP 56
KA + + D+ P GEV ++ L +C TD Y + P G
Sbjct: 2 KAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTA---PPGEDF 58
Query: 57 CILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLC----GKVRGAT 112
+LGHEA G+VE VG+G + + PGD V+P + +C C+ G+ + C RG
Sbjct: 59 LVLGHEALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIK 117
Query: 113 GA-GVM 117
G G M
Sbjct: 118 GLHGFM 123
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355 |
| >gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 62.9 bits (153), Expect = 5e-11
Identities = 58/211 (27%), Positives = 86/211 (40%), Gaps = 18/211 (8%)
Query: 28 EVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHV-IPC 86
+V IK+++ +CHTD + +P + GHE G V VG V++ GD V +
Sbjct: 36 DVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGV 95
Query: 87 YQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTV 146
C EC CKS C K + ND +GKP F+ V
Sbjct: 96 IVGCCGECSPCKSDLEQYCNKRIWS------YND----VYTDGKPT-----QGGFASAMV 140
Query: 147 VHDVSVAKI-DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEG 205
V V KI + AP LL GV T + + + G + GLG VG +
Sbjct: 141 VDQKFVVKIPEGMAPEQAAPLLCAGV-TVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKI 199
Query: 206 AKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 236
AKA G + D K+ + ++ G +++
Sbjct: 200 AKAMGHHVTVISSSDKKREEALEHLGADDYL 230
|
Length = 357 |
| >gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Score = 60.8 bits (148), Expect = 2e-10
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 12 KPLVIEDVQVA--PPQAGEVRIKILFTALCHTDAYTWSGK---DPEGLFPCILGHEAAGI 66
PLV+E V + PP GEV +++L + +D T SG P P + G+E G+
Sbjct: 10 LPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPP--LPAVPGNEGVGV 67
Query: 67 VESVGEGVTEVQPGDHVIP 85
V VG GV+ + G V+P
Sbjct: 68 VVEVGSGVSGLLVGQRVLP 86
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323 |
| >gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Score = 59.4 bits (145), Expect = 7e-10
Identities = 66/274 (24%), Positives = 98/274 (35%), Gaps = 69/274 (25%)
Query: 3 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK--DPEGLFPCI 58
KA V EP P L + +V P GEV I++ + D G P G I
Sbjct: 2 KAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASD-I 60
Query: 59 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 118
LG E AG+V +VG GVT + GD V C + G G
Sbjct: 61 LGLEVAGVVVAVGPGVTGWKVGDRV---------------------CALLAG--GG---- 93
Query: 119 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP----TG 174
+++Y VV + + L + +P T
Sbjct: 94 ----------------------YAEYVVVPAGQLLPVPEGLSLVE----AAALPEVFFTA 127
Query: 175 LGAVWNTAKVEPGSIVAVFGLGT--VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 232
++ ++ G V + G G VG A + AKA GA RVI +K + + G
Sbjct: 128 WQNLFQLGGLKAGETVLIHG-GASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGA 185
Query: 233 TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG 265
+N + D + + + T G GVD + +G
Sbjct: 186 DVAINYRTED--FAEEVKEATGGRGVDVILDMVG 217
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323 |
| >gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 58.9 bits (142), Expect = 1e-09
Identities = 78/301 (25%), Positives = 113/301 (37%), Gaps = 31/301 (10%)
Query: 28 EVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHV-IPC 86
+V +KILF +CH+D +T +P I GHE GI VG+ VT+ + GD V +
Sbjct: 33 DVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGV 92
Query: 87 YQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTV 146
C+ C+ C N C KV F+ N + +S V
Sbjct: 93 IIGSCQSCESCNQDLENYCPKV---------------VFTYNSRSSDGTRNQGGYSDVIV 137
Query: 147 VHDVSVAKIDPQAPLDKVCLLGC-GVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEG 205
V V I P D L C G+ + E G + V GLG +G +
Sbjct: 138 VDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKI 197
Query: 206 AKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265
KA G + K+ + G F+ D K + V G +D+ I
Sbjct: 198 GKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAV------GTMDF---IID 248
Query: 266 NVSVMRAALECCH--KGWGTSVIVGVAASGQEISTRPFQLVTGR-VWKGTAFGGFKSRSQ 322
VS A L K G V +G+ ++ F LV GR + G+ GG K +
Sbjct: 249 TVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPI--FPLVLGRKMVGGSQIGGMKETQE 306
Query: 323 V 323
+
Sbjct: 307 M 307
|
Length = 375 |
| >gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Score = 58.5 bits (142), Expect = 1e-09
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 9 EPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIV 67
+P L I +V P AGEV ++ + + + D +T G P I G EA G+V
Sbjct: 11 DPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVV 70
Query: 68 ESVGEGVTEVQPGDHV 83
++VGEGV +Q G V
Sbjct: 71 DAVGEGVKGLQVGQRV 86
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324 |
| >gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional | Back alignment and domain information |
|---|
Score = 58.2 bits (141), Expect = 2e-09
Identities = 69/281 (24%), Positives = 110/281 (39%), Gaps = 82/281 (29%)
Query: 13 PLVIEDVQVAP--PQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESV 70
P V++ V+ P P EV+++ + + D Y SG P P LG EAAG+V V
Sbjct: 13 PEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKV 72
Query: 71 GEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGK 130
G GV ++ GD V+ + +S A GA
Sbjct: 73 GSGVKHIKVGDRVV-----------YAQS-----------ALGA---------------- 94
Query: 131 PIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP---------TGLGAVW-- 179
Y+ VH+V P DK +L + GL +
Sbjct: 95 -------------YSSVHNV---------PADKAAILPDAISFEQAAASFLKGLTVYYLL 132
Query: 180 -NTAKVEPGSIVAVF--GLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 236
T +++P +F G VGL + AKA GA ++IG +K RAK G + +
Sbjct: 133 RKTYEIKPDEQF-LFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVI 190
Query: 237 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALEC 276
N ++ + I + + ++T G V ++ +G A+L+C
Sbjct: 191 NYREEN--IVERVKEITGGKKVRVVYDSVGK-DTWEASLDC 228
|
Length = 327 |
| >gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR) | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 7e-09
Identities = 79/375 (21%), Positives = 122/375 (32%), Gaps = 87/375 (23%)
Query: 8 WEPNKPLVIEDVQVAPPQA-GEVRIKILFTALCHTDAYTWSGKDP-----EGLFPCILGH 61
EP + L +E ++ PP EV +K+L + D G P P + G+
Sbjct: 10 GEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGN 69
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
E G V VG GV ++PGD VIP G G
Sbjct: 70 EGVGEVVKVGSGVKSLKPGDWVIP------------------------LRPGLG------ 99
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
T+ + VV + K+ ++ L T + +
Sbjct: 100 ------------------TWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDF 141
Query: 182 AKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFV 236
K++PG V G VG AV + AK G + I + D + K G +
Sbjct: 142 VKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERLKALGADHVL 200
Query: 237 NPKD-HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQ- 294
++ ++L G + C+G S A G GT V G SGQ
Sbjct: 201 TEEELRSLLATELLKSAPGGRPKLALNCVGGKSATELA-RLLSPG-GTMVTYG-GMSGQP 257
Query: 295 -EISTRPFQLVTGRVWKGTAFGGF------KSRSQ------VPWLVDKYMKKEIK--VDE 339
+ T ++K GF K + + L + + ++K E
Sbjct: 258 VTVPTSLL------IFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAPPVE 311
Query: 340 YVTHNMTLGEINEAF 354
VT + L E +A
Sbjct: 312 KVTDDP-LEEFKDAL 325
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341 |
| >gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase | Back alignment and domain information |
|---|
Score = 52.2 bits (126), Expect = 1e-07
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 27 GEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVI 84
EV +++ L D G P LG E +GIV VG GVT ++ GD V+
Sbjct: 1 DEVEVEVKAAGLNFRDVLVALGLLPGD--ETPLGLECSGIVTRVGSGVTGLKVGDRVM 56
|
Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293 |
| >gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 52.2 bits (126), Expect = 1e-07
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 14 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSG--KDPEGLFPCILGHEAAGIVESVG 71
L +E + P +GEVR+++ L D G P + G E AG VE+VG
Sbjct: 14 LKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKP-PFVPGFECAGTVEAVG 72
Query: 72 EGVTEVQPGDHVI 84
EGV + + GD V+
Sbjct: 73 EGVKDFKVGDRVM 85
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337 |
| >gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 52.0 bits (125), Expect = 2e-07
Identities = 54/259 (20%), Positives = 83/259 (32%), Gaps = 62/259 (23%)
Query: 14 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK--DPEGLFPCILGHEAAGIVESVG 71
L I + P+ +V IK+ + D GK P G ILG E AG VE VG
Sbjct: 16 LKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSE-ILGLEVAGYVEDVG 74
Query: 72 EGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKP 131
V + GD V+ + G
Sbjct: 75 SDVKRFKEGDRVM---------------------ALLPGG-------------------- 93
Query: 132 IYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP----TGLGAVWNTAKVEPG 187
+++Y V H V I ++ +P T + V+ G
Sbjct: 94 --------GYAEYAVAHKGHVMHIPQGYTFEE----AAAIPEAFLTAWQLLKKHGDVKKG 141
Query: 188 SIVAVF-GLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQ 246
V + G VG A A+ A+ GA+ +I +K D K + D +
Sbjct: 142 QSVLIHAGASGVGTAAAQLAEKYGAATIITTS-SEEKVDFCKKLAAIILIRYPDEEGFAP 200
Query: 247 QVLVDLTDGGVDYSFECIG 265
+V + GV+ +C+G
Sbjct: 201 KVKKLTGEKGVNLVLDCVG 219
|
Length = 334 |
| >gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Score = 51.9 bits (125), Expect = 2e-07
Identities = 65/273 (23%), Positives = 94/273 (34%), Gaps = 77/273 (28%)
Query: 16 IEDVQVAPPQAGEVRIKILFTALCHTDAYT--WSGKDPEGLFPCILGHEAAGIVESVGEG 73
+E+V V P G+V ++ L+ +L D Y P P LG G V +
Sbjct: 29 LEEVDVPEPGEGQVLLRTLYLSL---DPYMRGRMSDAPSYAPPVELGEVMVGGT--VAKV 83
Query: 74 V----TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSING 129
V QPGD V+
Sbjct: 84 VASNHPGFQPGDIVV--------------------------------------------- 98
Query: 130 KPIYHFMGTSTFSQYTVVHDVSVAKIDP-QAPL-DKVCLLGCGVPTGLGA---VWNTAKV 184
G S + +Y + + K+DP APL + +LG GL A + + +
Sbjct: 99 -------GVSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLG---MPGLTAYFGLLDIGQP 148
Query: 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-GVTEFVNPKDHD 242
+ G V V G VG V + AK G RV+GI +K D G ++ K D
Sbjct: 149 KAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKAED 207
Query: 243 KPIQQVLVDLTDGGVDYSFECIGNVSVMRAALE 275
Q L + G+D FE +G V+ A L
Sbjct: 208 --FAQALKEACPKGIDVYFENVGGE-VLDAVLP 237
|
Length = 340 |
| >gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members | Back alignment and domain information |
|---|
Score = 50.6 bits (122), Expect = 5e-07
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 3 KAAVAWEPNK---PLVIEDVQVAPPQAG--EVRIKILFTALCHTDAYTWSGKDPEGLFPC 57
KA +P P + D+++ P G ++ +++ ++ D +G P P
Sbjct: 2 KAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPK 61
Query: 58 ILGHEAAGIVESVGEGVTEVQPGDHV 83
ILG +A+G+VE+VG VT + GD V
Sbjct: 62 ILGWDASGVVEAVGSEVTLFKVGDEV 87
|
This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336 |
| >gnl|CDD|131869 TIGR02822, adh_fam_2, zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Score = 50.3 bits (120), Expect = 6e-07
Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 7/101 (6%)
Query: 13 PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVES 69
PL + V P GE+ +++ +C TD + G P + P GHE G V
Sbjct: 14 PLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTP---GHEVVGEVAG 70
Query: 70 VGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVR 109
G GD V I + C C++C+ G NLC R
Sbjct: 71 RGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASR 111
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized [Energy metabolism, Fermentation]. Length = 329 |
| >gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Score = 50.3 bits (121), Expect = 7e-07
Identities = 66/253 (26%), Positives = 93/253 (36%), Gaps = 59/253 (23%)
Query: 16 IEDVQVAPPQAGEVRIKILFTALCHTDA-YTWSGKDPEGLFPCILGHEAAGIVESVGEGV 74
I DV V P GEV +K F + +D +T DP P G E G V +VGEGV
Sbjct: 20 IVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGV 79
Query: 75 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYH 134
T+ + GD V
Sbjct: 80 TDFKVGDAVA-------------------------------------------------- 89
Query: 135 FMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFG 194
M F++Y VV + P+ + + LL G+ T A+ +++ G V V
Sbjct: 90 TMSFGAFAEYQVVPARHAVPV-PELKPEVLPLLVSGL-TASIALEEVGEMKSGETVLVTA 147
Query: 195 L--GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDL 252
GT AV + AK AG VIG +K + K+ G +N K D + +VL
Sbjct: 148 AAGGTGQFAV-QLAKLAG-CHVIGTCSSDEKAEFLKSLGCDRPINYKTED--LGEVLKKE 203
Query: 253 TDGGVDYSFECIG 265
GVD +E +G
Sbjct: 204 YPKGVDVVYESVG 216
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329 |
| >gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Score = 48.6 bits (117), Expect = 2e-06
Identities = 65/282 (23%), Positives = 96/282 (34%), Gaps = 79/282 (28%)
Query: 14 LVIEDVQVAPPQAGEVRIKILFTALCHTDAY--TWSGKDPEGLFPCILGH--EAAGI--- 66
+ +V + + GEV ++ L+ ++ D Y W P LG G+
Sbjct: 20 FELVEVPLPELKDGEVLVRTLYLSV---DPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEV 76
Query: 67 VESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFS 126
VES + GD V
Sbjct: 77 VESRSPD---FKVGDLV------------------------------------------- 90
Query: 127 INGKPIYHFMGTSTFSQYTVVHDVS-VAKIDPQAPLDKVCLLG-CGVP--TGLGAVWNTA 182
F+G + +Y VV S + K+DP L LG G+ T +
Sbjct: 91 ------SGFLG---WQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIG 141
Query: 183 KVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKD 240
K +PG V V G VG V + AK GA RV+GI +K G +N K
Sbjct: 142 KPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLVEELGFDAAINYKT 200
Query: 241 HDKPIQQVLVDLTDGGVDYSFECIGNV--SVMRAALECCHKG 280
D + + L + G+D F+ NV ++ AAL +KG
Sbjct: 201 PD--LAEALKEAAPDGIDVYFD---NVGGEILDAALTLLNKG 237
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329 |
| >gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 5e-06
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 20 QVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 78
+VAPP GEVRI++ +L D G P +P G EA+G+V +VG VT +
Sbjct: 1 EVAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLA 60
Query: 79 PGDHVI 84
GD VI
Sbjct: 61 VGDEVI 66
|
Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303 |
| >gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 9e-06
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 12/87 (13%)
Query: 9 EPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPC----------- 57
+P + + +EDV V GEV + ++ + + + + G+ P F
Sbjct: 25 DPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGE-PVSTFAARQRRGRDEPYH 83
Query: 58 ILGHEAAGIVESVGEGVTEVQPGDHVI 84
I G +A+GIV +VGEGV + GD V+
Sbjct: 84 IGGSDASGIVWAVGEGVKNWKVGDEVV 110
|
Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393 |
| >gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 2e-05
Identities = 44/194 (22%), Positives = 79/194 (40%), Gaps = 37/194 (19%)
Query: 58 ILGHEAAGIVESVGEGVTEVQPGDHVI-PCYQAECRECKFCKSGKTNLCGKVRGATGAGV 116
I+G +A+G+V VG GVT + GD V+ C Q + + G L + R
Sbjct: 80 IIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPD-GRDGDPMLSSEQR------- 131
Query: 117 MMNDRKSRFSINGKPIYHFMGT-STFSQYTVVHDVSVAKIDPQAPL----DKVCLLGCGV 171
I+ + +F+++ +V D ++ P+ + C G
Sbjct: 132 ---------------IWGYETNFGSFAEFALVKD---YQLMPKPKHLTWEEAACPGLTG- 172
Query: 172 PTGLGAV--WNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 228
T + WN A V+PG V ++G G +G + A+A G + V + P+K + +
Sbjct: 173 ATAYRQLVGWNPAAVKPGDNVLIWGAAGGLGSYATQLARAGGGNPV-AVVSSPEKAEYCR 231
Query: 229 NFGVTEFVNPKDHD 242
+ G ++ D
Sbjct: 232 SLGAEAVIDRNDFG 245
|
The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398 |
| >gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 4e-05
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 14 LVIEDVQVAPPQAGEVRIKILFTALCHTDAY----TWSGKDPEGLFPCILGHEAAGIVES 69
L + + + P AGEV +K+ + + D + + P P G++ G V++
Sbjct: 15 LKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPP---LPFTPGYDLVGRVDA 71
Query: 70 VGEGVTEVQPGDHVI 84
+G GVT + GD V
Sbjct: 72 LGSGVTGFEVGDRVA 86
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331 |
| >gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase | Back alignment and domain information |
|---|
Score = 43.5 bits (104), Expect = 8e-05
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 59 LGHEAAGIVESVGEGVTEVQPGDHVI 84
LG E AG+V VG GVT + GD V+
Sbjct: 26 LGGECAGVVTRVGPGVTGLAVGDRVM 51
|
Enoylreductase in Polyketide synthases. Length = 287 |
| >gnl|CDD|234024 TIGR02817, adh_fam_1, zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 1e-04
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 5 AVAWEPNKPL----VIEDVQVAPPQAGE--VRIKILFTALCHTDAYTWSGKDPEGLFPCI 58
AV ++ P+ + D+ + P+ G + +++ ++ D + PE P I
Sbjct: 2 AVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKI 61
Query: 59 LGHEAAGIVESVGEGVTEVQPGDHV 83
LG +AAG+V +VG+ VT +PGD V
Sbjct: 62 LGWDAAGVVVAVGDEVTLFKPGDEV 86
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model [Energy metabolism, Fermentation]. Length = 336 |
| >gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 36/146 (24%), Positives = 56/146 (38%), Gaps = 19/146 (13%)
Query: 135 FMGTSTFSQYTVV---HDV-SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT-----AKVE 185
+ G T SQY +V D S+ + L++ P LG + K+
Sbjct: 95 YGGQGTLSQYLLVDPKKDKKSITRKPENISLEE----AAAWPLVLGTAYQILEDLGQKLG 150
Query: 186 PGSIVAVFGLGT-VGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD- 242
P S V V G T VG + AK V+G + + K G F++ H
Sbjct: 151 PDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGT-CSSRSAELNKKLGADHFIDYDAHSG 209
Query: 243 -KPIQQVLVDLTDGG-VDYSFECIGN 266
K ++ VL ++ G D +C+G
Sbjct: 210 VKLLKPVLENVKGQGKFDLILDCVGG 235
|
This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352 |
| >gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 3e-04
Identities = 34/85 (40%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQ--AGEVRIKILFTALCHTDAYTWSGK--DPEGLFPCI 58
KA EP P V+ V+V P AGEV I++ + D +GK P G I
Sbjct: 2 KAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASD-I 60
Query: 59 LGHEAAGIVESVGEGVTEVQPGDHV 83
LG E AG V +VGEGV+ + GD V
Sbjct: 61 LGLEVAGEVVAVGEGVSRWKVGDRV 85
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325 |
| >gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 5e-04
Identities = 74/287 (25%), Positives = 104/287 (36%), Gaps = 59/287 (20%)
Query: 14 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL---FPCILGHEAAGIVESV 70
LV EDV P G+VRI + + D SG P P + G E AG+V++V
Sbjct: 15 LVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAV 74
Query: 71 GEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGK 130
G GV G V+ TG
Sbjct: 75 GPGVDPAWLGRRVV-------------------------AHTG----------------- 92
Query: 131 PIYHFMGTSTFSQYTVVHDVSVAKI-DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSI 189
+++ V S+ + D V ++ G T LG + + A + PG +
Sbjct: 93 -----RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGR-TALGLL-DLATLTPGDV 145
Query: 190 VAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQV 248
V V G +G + + AKAAGA V+G P K + G V+ D P QV
Sbjct: 146 VLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVAVDYTRPDWP-DQV 203
Query: 249 LVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE 295
L GGV + +G + RAAL G G + G ASG+
Sbjct: 204 REALGGGGVTVVLDGVGGA-IGRAALALLAPG-GRFLTYG-WASGEW 247
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324 |
| >gnl|CDD|216949 pfam02254, TrkA_N, TrkA-N domain | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 5e-04
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 190 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 233
+ + G G VG ++AE + G V+ ID DP++ + + GV
Sbjct: 1 IIIIGYGRVGRSLAEELREGG-PDVVVIDKDPERVEELREEGVP 43
|
This domain is found in a wide variety of proteins. These protein include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD. Length = 116 |
| >gnl|CDD|133444 cd01075, NAD_bind_Leu_Phe_Val_DH, NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 5e-04
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 168 GCGVPTGLGA----VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK 223
GV G+ A + T +E G VAV GLG VG +AE GA ++I DI+ +
Sbjct: 6 AYGVFLGMKAAAEHLLGTDSLE-GKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEA 63
Query: 224 FDRA-KNFGVT 233
RA + FG T
Sbjct: 64 VARAAELFGAT 74
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha-beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts. Length = 200 |
| >gnl|CDD|234094 TIGR03026, NDP-sugDHase, nucleotide sugar dehydrogenase | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 8e-04
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 190 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238
+AV GLG VGL +A G V G+DID +K D+ G + P
Sbjct: 3 IAVIGLGYVGLPLAALLADLGHD-VTGVDIDQEKVDKLNK-GKSPIYEP 49
|
Enzymes in this family catalyze the NAD-dependent alcohol-to-acid oxidation of nucleotide-linked sugars. Examples include UDP-glucose 6-dehydrogenase (1.1.1.22) , GDP-mannose 6-dehydrogenase (1.1.1.132) , UDP-N-acetylglucosamine 6-dehydrogenase (1.1.1.136), UDP-N-acetyl-D-galactosaminuronic acid dehydrogenase and UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase. These enzymes are most often involved in the biosynthesis of polysaccharides and are often found in operons devoted to that purpose. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively. Length = 409 |
| >gnl|CDD|130269 TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.002
Identities = 59/258 (22%), Positives = 97/258 (37%), Gaps = 62/258 (24%)
Query: 5 AVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCH-TDAYTWSGKDPE--GL-FPCILG 60
A+ + + +V + PP G++ ++I ++ + T+ W+G P G+ +P + G
Sbjct: 4 AIVLSGPNQIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPG 63
Query: 61 HEAAGIVESVGEGVTEVQPGDHV-IP---CYQAECRECKFCKSGKTNLCGKVRGATGAGV 116
+E+ G V G +PGD V +P CY VRG G
Sbjct: 64 YESVGRVVEAGPDTGF-RPGDRVFVPGSNCY------------------EDVRGLFGGA- 103
Query: 117 MMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLG 176
S+ V V ++DP L L T
Sbjct: 104 -------------------------SKRLVTPASRVCRLDPA--LGPQGALLALAATARH 136
Query: 177 AV-WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 235
AV KV P IV G GT+G +A KAAG S + +P++ D A + V
Sbjct: 137 AVAGAEVKVLPDLIV---GHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGYEV--- 190
Query: 236 VNPKDHDKPIQQVLVDLT 253
++P+ + + + D +
Sbjct: 191 LDPEKDPRRDYRAIYDAS 208
|
[Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 308 |
| >gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.002
Identities = 58/246 (23%), Positives = 85/246 (34%), Gaps = 64/246 (26%)
Query: 17 EDVQVAPPQAGEVRIKILFTALCHTDAYT---WSGKD----------------PEGL-FP 56
+DV V P GEV I++ + +TD T W + L FP
Sbjct: 19 DDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFP 78
Query: 57 CILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGV 116
I G + G V +VGEGV + G+ V+ +R
Sbjct: 79 RIQGADIVGRVVAVGEGVDTARIGERVL---------VDPS----------IRDPPEDDP 119
Query: 117 MMNDRKSRFSINGKPIYHFMGTST---FSQYTVVHDVSVAKIDPQAPLDKVCL--LGCGV 171
D ++G+ F++YTVV + ++ PL V L C
Sbjct: 120 ADID--------------YIGSERDGGFAEYTVVPAENAYPVNS--PLSDVELATFPCSY 163
Query: 172 PTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF 230
T + A V G V V G G VG A+ + AK GA VI + K + +
Sbjct: 164 STAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAV-AGAAKEEAVRAL 220
Query: 231 GVTEFV 236
G +
Sbjct: 221 GADTVI 226
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350 |
| >gnl|CDD|223749 COG0677, WecC, UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.003
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 190 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 229
+ V GLG VGL +A A A+ +VIG+DI+ KK D+
Sbjct: 12 IGVIGLGYVGLPLA-AAFASAGFKVIGVDINQKKVDKLNR 50
|
Length = 436 |
| >gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1 | Back alignment and domain information |
|---|
Score = 38.7 bits (91), Expect = 0.003
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Query: 12 KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK-DPEGLFPCILGHEAAGIVESV 70
K L + + +V P GEV IK+ + +D G+ P G E +G V +
Sbjct: 16 KELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAA 75
Query: 71 GEGV 74
G G
Sbjct: 76 GGGP 79
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 371 | |||
| KOG0022 | 375 | consensus Alcohol dehydrogenase, class III [Second | 100.0 | |
| COG1062 | 366 | AdhC Zn-dependent alcohol dehydrogenases, class II | 100.0 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 100.0 | |
| KOG0024 | 354 | consensus Sorbitol dehydrogenase [Secondary metabo | 100.0 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 100.0 | |
| TIGR02818 | 368 | adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr | 100.0 | |
| cd08300 | 368 | alcohol_DH_class_III class III alcohol dehydrogena | 100.0 | |
| PLN02740 | 381 | Alcohol dehydrogenase-like | 100.0 | |
| cd08281 | 371 | liver_ADH_like1 Zinc-dependent alcohol dehydrogena | 100.0 | |
| cd08301 | 369 | alcohol_DH_plants Plant alcohol dehydrogenase. NAD | 100.0 | |
| TIGR03451 | 358 | mycoS_dep_FDH mycothiol-dependent formaldehyde deh | 100.0 | |
| PLN02827 | 378 | Alcohol dehydrogenase-like | 100.0 | |
| cd08277 | 365 | liver_alcohol_DH_like Liver alcohol dehydrogenase. | 100.0 | |
| cd08239 | 339 | THR_DH_like L-threonine dehydrogenase (TDH)-like. | 100.0 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 100.0 | |
| COG1063 | 350 | Tdh Threonine dehydrogenase and related Zn-depende | 100.0 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 100.0 | |
| TIGR02819 | 393 | fdhA_non_GSH formaldehyde dehydrogenase, glutathio | 100.0 | |
| cd08299 | 373 | alcohol_DH_class_I_II_IV class I, II, IV alcohol d | 100.0 | |
| PRK10309 | 347 | galactitol-1-phosphate dehydrogenase; Provisional | 100.0 | |
| PLN02586 | 360 | probable cinnamyl alcohol dehydrogenase | 100.0 | |
| cd05279 | 365 | Zn_ADH1 Liver alcohol dehydrogenase and related zi | 100.0 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 100.0 | |
| PLN02178 | 375 | cinnamyl-alcohol dehydrogenase | 100.0 | |
| TIGR03201 | 349 | dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co | 100.0 | |
| cd08231 | 361 | MDR_TM0436_like Hypothetical enzyme TM0436 resembl | 100.0 | |
| TIGR02822 | 329 | adh_fam_2 zinc-binding alcohol dehydrogenase famil | 100.0 | |
| cd08233 | 351 | butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog | 100.0 | |
| PLN02514 | 357 | cinnamyl-alcohol dehydrogenase | 100.0 | |
| KOG1197 | 336 | consensus Predicted quinone oxidoreductase [Energy | 100.0 | |
| cd08278 | 365 | benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be | 100.0 | |
| cd08285 | 351 | NADP_ADH NADP(H)-dependent alcohol dehydrogenases. | 100.0 | |
| cd08279 | 363 | Zn_ADH_class_III Class III alcohol dehydrogenase. | 100.0 | |
| PRK10083 | 339 | putative oxidoreductase; Provisional | 100.0 | |
| cd08237 | 341 | ribitol-5-phosphate_DH ribitol-5-phosphate dehydro | 100.0 | |
| cd05278 | 347 | FDH_like Formaldehyde dehydrogenases. Formaldehyde | 100.0 | |
| cd08238 | 410 | sorbose_phosphate_red L-sorbose-1-phosphate reduct | 100.0 | |
| cd08296 | 333 | CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci | 100.0 | |
| cd08256 | 350 | Zn_ADH2 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08286 | 345 | FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik | 100.0 | |
| cd08283 | 386 | FDH_like_1 Glutathione-dependent formaldehyde dehy | 100.0 | |
| TIGR01202 | 308 | bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl | 100.0 | |
| cd05284 | 340 | arabinose_DH_like D-arabinose dehydrogenase. This | 100.0 | |
| cd08263 | 367 | Zn_ADH10 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08240 | 350 | 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy | 100.0 | |
| cd08260 | 345 | Zn_ADH6 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08284 | 344 | FDH_like_2 Glutathione-dependent formaldehyde dehy | 100.0 | |
| cd08291 | 324 | ETR_like_1 2-enoyl thioester reductase (ETR) like | 100.0 | |
| cd08246 | 393 | crotonyl_coA_red crotonyl-CoA reductase. Crotonyl- | 100.0 | |
| cd08282 | 375 | PFDH_like Pseudomonas putida aldehyde-dismutating | 100.0 | |
| PRK05396 | 341 | tdh L-threonine 3-dehydrogenase; Validated | 100.0 | |
| cd08287 | 345 | FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik | 100.0 | |
| cd08262 | 341 | Zn_ADH8 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| PLN02702 | 364 | L-idonate 5-dehydrogenase | 100.0 | |
| cd08261 | 337 | Zn_ADH7 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08242 | 319 | MDR_like Medium chain dehydrogenases/reductase (MD | 100.0 | |
| cd08235 | 343 | iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ | 100.0 | |
| cd08254 | 338 | hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo | 100.0 | |
| TIGR01751 | 398 | crot-CoA-red crotonyl-CoA reductase. The enzyme mo | 100.0 | |
| cd08265 | 384 | Zn_ADH3 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| PRK13771 | 334 | putative alcohol dehydrogenase; Provisional | 100.0 | |
| cd05285 | 343 | sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a | 100.0 | |
| PRK09422 | 338 | ethanol-active dehydrogenase/acetaldehyde-active r | 100.0 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 100.0 | |
| cd05283 | 337 | CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam | 100.0 | |
| cd08236 | 343 | sugar_DH NAD(P)-dependent sugar dehydrogenases. Th | 100.0 | |
| cd05281 | 341 | TDH Threonine dehydrogenase. L-threonine dehydroge | 100.0 | |
| cd08297 | 341 | CAD3 Cinnamyl alcohol dehydrogenases (CAD). These | 100.0 | |
| cd08232 | 339 | idonate-5-DH L-idonate 5-dehydrogenase. L-idonate | 100.0 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| TIGR03366 | 280 | HpnZ_proposed putative phosphonate catabolism asso | 100.0 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 100.0 | |
| TIGR00692 | 340 | tdh L-threonine 3-dehydrogenase. E. coli His-90 mo | 100.0 | |
| cd08234 | 334 | threonine_DH_like L-threonine dehydrogenase. L-thr | 100.0 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 100.0 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 100.0 | |
| KOG0025 | 354 | consensus Zn2+-binding dehydrogenase (nuclear rece | 100.0 | |
| cd08274 | 350 | MDR9 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd08264 | 325 | Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam | 100.0 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 100.0 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 100.0 | |
| cd08298 | 329 | CAD2 Cinnamyl alcohol dehydrogenases (CAD). These | 100.0 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 100.0 | |
| PRK10754 | 327 | quinone oxidoreductase, NADPH-dependent; Provision | 100.0 | |
| cd08245 | 330 | CAD Cinnamyl alcohol dehydrogenases (CAD) and rela | 100.0 | |
| cd08290 | 341 | ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi | 100.0 | |
| cd08258 | 306 | Zn_ADH4 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| TIGR02817 | 336 | adh_fam_1 zinc-binding alcohol dehydrogenase famil | 100.0 | |
| cd08244 | 324 | MDR_enoyl_red Possible enoyl reductase. Member ide | 100.0 | |
| cd08276 | 336 | MDR7 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| PTZ00354 | 334 | alcohol dehydrogenase; Provisional | 100.0 | |
| cd08249 | 339 | enoyl_reductase_like enoyl_reductase_like. Member | 100.0 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 100.0 | |
| cd05280 | 325 | MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone | 100.0 | |
| cd08270 | 305 | MDR4 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd08243 | 320 | quinone_oxidoreductase_like_1 Quinone oxidoreducta | 100.0 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 100.0 | |
| cd05282 | 323 | ETR_like 2-enoyl thioester reductase-like. 2-enoyl | 100.0 | |
| cd08269 | 312 | Zn_ADH9 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| TIGR02823 | 323 | oxido_YhdH putative quinone oxidoreductase, YhdH/Y | 100.0 | |
| cd08289 | 326 | MDR_yhfp_like Yhfp putative quinone oxidoreductase | 100.0 | |
| cd08252 | 336 | AL_MDR Arginate lyase and other MDR family members | 100.0 | |
| cd08248 | 350 | RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu | 100.0 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 100.0 | |
| cd05286 | 320 | QOR2 Quinone oxidoreductase (QOR). Quinone oxidore | 100.0 | |
| cd08288 | 324 | MDR_yhdh Yhdh putative quinone oxidoreductases. Yh | 100.0 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 100.0 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 100.0 | |
| cd08271 | 325 | MDR5 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd08247 | 352 | AST1_like AST1 is a cytoplasmic protein associated | 100.0 | |
| cd08272 | 326 | MDR6 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd08273 | 331 | MDR8 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| TIGR02824 | 325 | quinone_pig3 putative NAD(P)H quinone oxidoreducta | 100.0 | |
| cd08268 | 328 | MDR2 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 100.0 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 100.0 | |
| cd08251 | 303 | polyketide_synthase polyketide synthase. Polyketid | 100.0 | |
| cd05289 | 309 | MDR_like_2 alcohol dehydrogenase and quinone reduc | 100.0 | |
| cd08241 | 323 | QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t | 100.0 | |
| cd08275 | 337 | MDR3 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd08267 | 319 | MDR1 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd05195 | 293 | enoyl_red enoyl reductase of polyketide synthase. | 99.97 | |
| smart00829 | 288 | PKS_ER Enoylreductase. Enoylreductase in Polyketid | 99.97 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 99.96 | |
| cd08255 | 277 | 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_ | 99.96 | |
| KOG1196 | 343 | consensus Predicted NAD-dependent oxidoreductase [ | 99.94 | |
| PF08240 | 109 | ADH_N: Alcohol dehydrogenase GroES-like domain; In | 99.87 | |
| PF00107 | 130 | ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: | 99.72 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 99.44 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 99.32 | |
| PF13602 | 127 | ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ | 99.17 | |
| PRK11873 | 272 | arsM arsenite S-adenosylmethyltransferase; Reviewe | 98.53 | |
| TIGR00561 | 511 | pntA NAD(P) transhydrogenase, alpha subunit. In so | 98.53 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 98.29 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 98.21 | |
| TIGR00936 | 406 | ahcY adenosylhomocysteinase. This enzyme hydrolyze | 98.19 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 98.11 | |
| PLN02494 | 477 | adenosylhomocysteinase | 98.06 | |
| PRK00517 | 250 | prmA ribosomal protein L11 methyltransferase; Revi | 98.05 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 98.02 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 97.88 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 97.75 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 97.72 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 97.66 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 97.65 | |
| COG2518 | 209 | Pcm Protein-L-isoaspartate carboxylmethyltransfera | 97.62 | |
| TIGR00406 | 288 | prmA ribosomal protein L11 methyltransferase. Ribo | 97.53 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 97.52 | |
| PRK12771 | 564 | putative glutamate synthase (NADPH) small subunit; | 97.52 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 97.47 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 97.21 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.2 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 97.19 | |
| PRK00377 | 198 | cbiT cobalt-precorrin-6Y C(15)-methyltransferase; | 97.05 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 97.05 | |
| TIGR00438 | 188 | rrmJ cell division protein FtsJ. | 97.01 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 97.01 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 96.99 | |
| PRK13943 | 322 | protein-L-isoaspartate O-methyltransferase; Provis | 96.96 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 96.94 | |
| COG2264 | 300 | PrmA Ribosomal protein L11 methylase [Translation, | 96.94 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 96.94 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 96.93 | |
| PRK11705 | 383 | cyclopropane fatty acyl phospholipid synthase; Pro | 96.93 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 96.84 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 96.84 | |
| PF01262 | 168 | AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal | 96.8 | |
| COG2242 | 187 | CobL Precorrin-6B methylase 2 [Coenzyme metabolism | 96.78 | |
| PRK14967 | 223 | putative methyltransferase; Provisional | 96.75 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 96.72 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 96.72 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 96.71 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 96.71 | |
| PF11017 | 314 | DUF2855: Protein of unknown function (DUF2855); In | 96.71 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 96.71 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 96.67 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 96.66 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.66 | |
| COG4122 | 219 | Predicted O-methyltransferase [General function pr | 96.65 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 96.63 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 96.63 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 96.63 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 96.62 | |
| TIGR02469 | 124 | CbiT precorrin-6Y C5,15-methyltransferase (decarbo | 96.62 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 96.59 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 96.57 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 96.57 | |
| PF02353 | 273 | CMAS: Mycolic acid cyclopropane synthetase; InterP | 96.55 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 96.54 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.54 | |
| PF01135 | 209 | PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl | 96.52 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 96.52 | |
| PRK13942 | 212 | protein-L-isoaspartate O-methyltransferase; Provis | 96.51 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 96.51 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 96.46 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 96.46 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 96.45 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 96.45 | |
| cd05311 | 226 | NAD_bind_2_malic_enz NAD(P) binding domain of mali | 96.45 | |
| PF12847 | 112 | Methyltransf_18: Methyltransferase domain; PDB: 3G | 96.44 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 96.41 | |
| PRK00811 | 283 | spermidine synthase; Provisional | 96.38 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.35 | |
| PRK13944 | 205 | protein-L-isoaspartate O-methyltransferase; Provis | 96.32 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 96.32 | |
| PRK03369 | 488 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.32 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 96.3 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 96.29 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 96.29 | |
| PF06325 | 295 | PrmA: Ribosomal protein L11 methyltransferase (Prm | 96.25 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 96.23 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 96.2 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 96.19 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 96.18 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 96.18 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 96.18 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.17 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 96.17 | |
| COG0686 | 371 | Ald Alanine dehydrogenase [Amino acid transport an | 96.16 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 96.16 | |
| PRK12550 | 272 | shikimate 5-dehydrogenase; Reviewed | 96.15 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 96.13 | |
| PRK00536 | 262 | speE spermidine synthase; Provisional | 96.13 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 96.1 | |
| PLN02366 | 308 | spermidine synthase | 96.1 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 96.09 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 96.09 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.06 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 96.05 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 96.05 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 96.05 | |
| TIGR00080 | 215 | pimt protein-L-isoaspartate(D-aspartate) O-methylt | 96.03 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 96.03 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 96.01 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 96.01 | |
| PRK00107 | 187 | gidB 16S rRNA methyltransferase GidB; Reviewed | 96.01 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 95.96 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 95.94 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 95.94 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 95.93 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 95.93 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 95.92 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 95.91 | |
| PRK07502 | 307 | cyclohexadienyl dehydrogenase; Validated | 95.89 | |
| COG2519 | 256 | GCD14 tRNA(1-methyladenosine) methyltransferase an | 95.88 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 95.88 | |
| PRK08618 | 325 | ornithine cyclodeaminase; Validated | 95.86 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 95.86 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 95.86 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 95.86 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 95.85 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 95.84 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 95.79 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 95.77 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.72 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 95.7 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 95.69 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 95.66 | |
| TIGR01318 | 467 | gltD_gamma_fam glutamate synthase small subunit fa | 95.66 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 95.64 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.63 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 95.62 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 95.61 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 95.6 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 95.59 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 95.59 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 95.58 | |
| PRK12809 | 639 | putative oxidoreductase Fe-S binding subunit; Revi | 95.55 | |
| PRK07402 | 196 | precorrin-6B methylase; Provisional | 95.55 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.54 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 95.54 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 95.54 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.54 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 95.54 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 95.53 | |
| COG2227 | 243 | UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- | 95.52 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 95.52 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 95.5 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 95.5 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 95.5 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 95.49 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 95.49 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 95.48 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 95.47 | |
| PRK11207 | 197 | tellurite resistance protein TehB; Provisional | 95.47 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 95.46 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 95.45 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 95.45 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.43 | |
| PLN02476 | 278 | O-methyltransferase | 95.43 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 95.41 | |
| PRK05717 | 255 | oxidoreductase; Validated | 95.41 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 95.41 | |
| PLN02781 | 234 | Probable caffeoyl-CoA O-methyltransferase | 95.39 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 95.38 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 95.38 | |
| PRK04457 | 262 | spermidine synthase; Provisional | 95.38 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 95.37 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 95.36 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 95.35 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 95.35 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.34 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 95.32 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 95.31 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 95.31 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 95.31 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.29 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 95.27 | |
| PLN03075 | 296 | nicotianamine synthase; Provisional | 95.26 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 95.26 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 95.25 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 95.25 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 95.24 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 95.24 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 95.23 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 95.23 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 95.22 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 95.22 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 95.22 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 95.21 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 95.21 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 95.19 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 95.19 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 95.18 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 95.18 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 95.17 | |
| PF01596 | 205 | Methyltransf_3: O-methyltransferase; InterPro: IPR | 95.17 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 95.16 | |
| PRK08317 | 241 | hypothetical protein; Provisional | 95.16 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 95.15 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 95.15 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 95.14 | |
| COG2230 | 283 | Cfa Cyclopropane fatty acid synthase and related m | 95.13 | |
| COG1179 | 263 | Dinucleotide-utilizing enzymes involved in molybdo | 95.13 | |
| PRK01581 | 374 | speE spermidine synthase; Validated | 95.13 | |
| PRK08643 | 256 | acetoin reductase; Validated | 95.11 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 95.11 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 95.11 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 95.09 | |
| PRK12769 | 654 | putative oxidoreductase Fe-S binding subunit; Revi | 95.08 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 95.08 | |
| PRK14188 | 296 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.07 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 95.07 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 95.04 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 95.04 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.04 | |
| COG3288 | 356 | PntA NAD/NADP transhydrogenase alpha subunit [Ener | 95.04 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 95.02 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 95.01 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 95.0 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 95.0 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 95.0 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 94.99 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 94.99 | |
| COG2226 | 238 | UbiE Methylase involved in ubiquinone/menaquinone | 94.96 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 94.95 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 94.94 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 94.94 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 94.93 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 94.92 | |
| PRK14191 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.92 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 94.92 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 94.91 | |
| PLN02823 | 336 | spermine synthase | 94.91 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 94.9 | |
| COG0421 | 282 | SpeE Spermidine synthase [Amino acid transport and | 94.88 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 94.88 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 94.87 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 94.86 | |
| PLN02589 | 247 | caffeoyl-CoA O-methyltransferase | 94.86 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 94.82 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 94.81 | |
| COG0031 | 300 | CysK Cysteine synthase [Amino acid transport and m | 94.8 | |
| TIGR03840 | 213 | TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d | 94.8 | |
| PRK10792 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.79 | |
| PF02558 | 151 | ApbA: Ketopantoate reductase PanE/ApbA; InterPro: | 94.79 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.77 | |
| PLN03139 | 386 | formate dehydrogenase; Provisional | 94.77 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 94.75 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 94.75 | |
| PRK01683 | 258 | trans-aconitate 2-methyltransferase; Provisional | 94.75 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 94.74 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 94.71 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 94.7 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 94.7 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 94.69 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 94.68 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 94.68 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 94.66 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 94.66 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 94.66 | |
| PRK05562 | 223 | precorrin-2 dehydrogenase; Provisional | 94.62 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 94.58 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 94.58 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 94.56 | |
| TIGR00417 | 270 | speE spermidine synthase. the SpeE subunit of sper | 94.54 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 94.53 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 94.53 | |
| TIGR00477 | 195 | tehB tellurite resistance protein TehB. Part of a | 94.52 | |
| PRK07340 | 304 | ornithine cyclodeaminase; Validated | 94.51 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 94.51 | |
| PRK14103 | 255 | trans-aconitate 2-methyltransferase; Provisional | 94.5 | |
| PRK08300 | 302 | acetaldehyde dehydrogenase; Validated | 94.5 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 94.49 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 94.43 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 94.43 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 94.41 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 94.41 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 94.4 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 94.39 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 94.38 | |
| TIGR03215 | 285 | ac_ald_DH_ac acetaldehyde dehydrogenase (acetylati | 94.36 | |
| PRK00312 | 212 | pcm protein-L-isoaspartate O-methyltransferase; Re | 94.35 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 94.33 | |
| PF08704 | 247 | GCD14: tRNA methyltransferase complex GCD14 subuni | 94.32 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 94.32 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 94.31 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 94.3 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 94.27 | |
| PRK13255 | 218 | thiopurine S-methyltransferase; Reviewed | 94.27 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 94.23 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 94.23 | |
| PRK07417 | 279 | arogenate dehydrogenase; Reviewed | 94.21 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 94.2 | |
| PLN02928 | 347 | oxidoreductase family protein | 94.19 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 94.14 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 94.09 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 94.06 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 94.06 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 94.03 | |
| PRK14189 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.0 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 94.0 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 93.99 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 93.96 | |
| KOG1252 | 362 | consensus Cystathionine beta-synthase and related | 93.96 | |
| PRK13403 | 335 | ketol-acid reductoisomerase; Provisional | 93.93 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 93.92 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 93.91 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 93.9 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 93.87 | |
| PRK08287 | 187 | cobalt-precorrin-6Y C(15)-methyltransferase; Valid | 93.86 | |
| PTZ00098 | 263 | phosphoethanolamine N-methyltransferase; Provision | 93.83 | |
| COG0334 | 411 | GdhA Glutamate dehydrogenase/leucine dehydrogenase | 93.83 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 93.81 | |
| PF01210 | 157 | NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate | 93.77 | |
| PF02670 | 129 | DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re | 93.76 | |
| PRK04266 | 226 | fibrillarin; Provisional | 93.75 | |
| PLN02244 | 340 | tocopherol O-methyltransferase | 93.74 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 93.73 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 93.73 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 93.7 | |
| PRK14618 | 328 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 93.66 | |
| PF13823 | 23 | ADH_N_assoc: Alcohol dehydrogenase GroES-associate | 93.65 | |
| COG1648 | 210 | CysG Siroheme synthase (precorrin-2 oxidase/ferroc | 93.62 | |
| TIGR00138 | 181 | gidB 16S rRNA methyltransferase GidB. GidB (glucos | 93.61 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 93.6 | |
| TIGR01505 | 291 | tartro_sem_red 2-hydroxy-3-oxopropionate reductase | 93.6 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 93.59 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 93.59 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 93.55 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 93.55 | |
| PF01564 | 246 | Spermine_synth: Spermine/spermidine synthase; Inte | 93.53 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 93.5 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 93.5 | |
| COG1052 | 324 | LdhA Lactate dehydrogenase and related dehydrogena | 93.48 | |
| cd05211 | 217 | NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of | 93.46 | |
| cd05191 | 86 | NAD_bind_amino_acid_DH NAD(P) binding domain of am | 93.46 | |
| PLN02735 | 1102 | carbamoyl-phosphate synthase | 93.43 | |
| PRK06522 | 304 | 2-dehydropantoate 2-reductase; Reviewed | 93.43 | |
| PF07991 | 165 | IlvN: Acetohydroxy acid isomeroreductase, catalyti | 93.42 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 93.39 | |
| cd05212 | 140 | NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom | 93.39 | |
| PF02737 | 180 | 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind | 93.37 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 93.37 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 93.36 | |
| PRK05708 | 305 | 2-dehydropantoate 2-reductase; Provisional | 93.36 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 93.33 | |
| PRK06141 | 314 | ornithine cyclodeaminase; Validated | 93.32 | |
| PRK11036 | 255 | putative S-adenosyl-L-methionine-dependent methylt | 93.3 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 93.24 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 93.24 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 93.23 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 93.22 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 93.19 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 93.19 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 93.1 | |
| TIGR00452 | 314 | methyltransferase, putative. Known examples to dat | 93.07 | |
| COG0673 | 342 | MviM Predicted dehydrogenases and related proteins | 93.01 | |
| PF01408 | 120 | GFO_IDH_MocA: Oxidoreductase family, NAD-binding R | 92.99 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 92.98 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 92.97 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 92.93 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 92.91 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 92.9 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 92.87 | |
| PRK06436 | 303 | glycerate dehydrogenase; Provisional | 92.85 | |
| PLN02256 | 304 | arogenate dehydrogenase | 92.84 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 92.84 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 92.84 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 92.83 |
| >KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-69 Score=463.76 Aligned_cols=369 Identities=74% Similarity=1.264 Sum_probs=358.5
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
+|||++.|++++||.++++.+++|+..||+||+.++++|++|.+.|+|..+...+|.++|||.+|+|+++|..|+++++|
T Consensus 7 ~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~~vk~G 86 (375)
T KOG0022|consen 7 TCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVTTVKPG 86 (375)
T ss_pred EEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCccccCCC
Confidence 58999999999999999999999999999999999999999999999998877899999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|+|+......|+.|.+|+++..|+|.+++..+..+..+.||++|+.-+|+.+||++++.+|+||.+++...+++|++..+
T Consensus 87 D~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~aP 166 (375)
T KOG0022|consen 87 DHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKIDPSAP 166 (375)
T ss_pred CEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecCCCCC
Confidence 99999999999999999999999999999998888887899999999999999999999999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
++.++++.|...|+|.|.+..+.+++|++|.|.|-|++|+++++-||+.||.++++++.+++|.+.+++||+.+++|+.+
T Consensus 167 l~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iNp~d 246 (375)
T KOG0022|consen 167 LEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFINPKD 246 (375)
T ss_pred hhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecChhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCCccc
Q 017431 241 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSR 320 (371)
Q Consensus 241 ~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 320 (371)
.....++.+.+.|++|+|+.|+|+|+.+++++++.+...+||+-|.+|....++.+++.++.++.++++.|+.++.++.+
T Consensus 247 ~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~FGG~K~~ 326 (375)
T KOG0022|consen 247 LKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSAFGGFKSK 326 (375)
T ss_pred ccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEEEecccccch
Confidence 65678899999999999999999999999999999999999999999999889999999999999999999999999999
Q ss_pred CcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEec
Q 017431 321 SQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 369 (371)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~ 369 (371)
.+++.+++.+.++++++.++|+|++||+++++||+.|.+++.+|.||.+
T Consensus 327 ~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~GksiR~vl~~ 375 (375)
T KOG0022|consen 327 SDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSIRCVLWM 375 (375)
T ss_pred hhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceEEEEEeC
Confidence 9999999999999999999999999999999999999999999999864
|
|
| >COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-68 Score=466.89 Aligned_cols=365 Identities=62% Similarity=1.077 Sum_probs=352.1
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
++||++.+++++||+++++++++|+++||+||+.++|+|++|.+.+.|..++. +|.++|||.+|+|+++|+.|+++++|
T Consensus 2 k~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkpG 80 (366)
T COG1062 2 KTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKPG 80 (366)
T ss_pred CceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCCC
Confidence 58999999999999999999999999999999999999999999999999988 99999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|+|+.....+|+.|.+|+.+..++|+........|.. +||+.|++.+|+.++|++|..+|++|..+++.+++|++++.+
T Consensus 81 DhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m-~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p 159 (366)
T COG1062 81 DHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTM-PDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAP 159 (366)
T ss_pred CEEEEcccCCCCCCchhhCCCcccccchhhhcccccc-cCCceeeecCCcceeeeeccccchhheeecccceEECCCCCC
Confidence 9999999999999999999999999999999888854 999999999999999999999999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
++.++++.|...|.+.+..+.+++++|++|.|.|.|++|++++|-|+..|++++++++.+++|++++++||+.+++|..+
T Consensus 160 ~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~~ 239 (366)
T COG1062 160 LEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKE 239 (366)
T ss_pred ccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCCccc
Q 017431 241 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSR 320 (371)
Q Consensus 241 ~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 320 (371)
.. +..+.+.++|++|+|.+|||+|+.+.+++++++..+ ||+.+.+|.......++++++.++.+++|+|+.++....+
T Consensus 240 ~~-~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~-~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~~~p~ 317 (366)
T COG1062 240 VD-DVVEAIVELTDGGADYAFECVGNVEVMRQALEATHR-GGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGARPR 317 (366)
T ss_pred hh-hHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhc-CCeEEEEecCCCCceeecChHHeeccceEEEEeecCCccc
Confidence 32 689999999999999999999999999999999999 5999999998888899999999998999999999988888
Q ss_pred CcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEec
Q 017431 321 SQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 369 (371)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~ 369 (371)
.+++.+++++.+|++++.+++++.++|+|+++||+.|.+++.+|.||+|
T Consensus 318 ~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~IR~Vi~~ 366 (366)
T COG1062 318 SDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSIRSVIRF 366 (366)
T ss_pred cchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCceeeEEecC
Confidence 9999999999999999999999999999999999999999999988875
|
|
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-64 Score=455.13 Aligned_cols=333 Identities=34% Similarity=0.512 Sum_probs=303.2
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
||||+++.++++|+++.+++.|+|.++||+|+|+++|+|++|++.++|.++...+|.+||||++|+|+++|++|++|++|
T Consensus 3 ~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k~G 82 (339)
T COG1064 3 TMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLKVG 82 (339)
T ss_pred ceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCCCC
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEee-cCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCC
Q 017431 81 DHVIP-CYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 159 (371)
Q Consensus 81 d~V~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~ 159 (371)
|||.+ +...+|+.|++|+.|+++.|++... .|++ .+| +|+||+++++.+++++|+++
T Consensus 83 DrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~---~gy~-~~G------------------Gyaeyv~v~~~~~~~iP~~~ 140 (339)
T COG1064 83 DRVGVGWLVISCGECEYCRSGNENLCPNQKI---TGYT-TDG------------------GYAEYVVVPARYVVKIPEGL 140 (339)
T ss_pred CEEEecCccCCCCCCccccCcccccCCCccc---ccee-ecC------------------cceeEEEEchHHeEECCCCC
Confidence 99988 8899999999999999999998664 4555 566 99999999999999999999
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCC
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 239 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~ 239 (371)
++++||.+.|+..|+|++| +..+++||++|+|+|+|++|++|+|+|+++|+ +|++++++++|.++++++|++++++..
T Consensus 141 d~~~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 141 DLAEAAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVINSS 218 (339)
T ss_pred ChhhhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEEcC
Confidence 9999999999999999998 55999999999999999999999999999998 999999999999999999999999876
Q ss_pred CCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecCCCc
Q 017431 240 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFK 318 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~ 318 (371)
+ .+..+.+++. +|+++++++ +.+++.+++.|+++ |+++.+|........+++.+.++ +++++.|+..++
T Consensus 219 ~--~~~~~~~~~~----~d~ii~tv~-~~~~~~~l~~l~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~-- 288 (339)
T COG1064 219 D--SDALEAVKEI----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGT-- 288 (339)
T ss_pred C--chhhHHhHhh----CcEEEECCC-hhhHHHHHHHHhcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCC--
Confidence 4 6666666664 999999999 79999999999997 99999999742333456666555 499999998875
Q ss_pred ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecC
Q 017431 319 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 370 (371)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~ 370 (371)
+.++++++++.+++++++. +.+.++++|+++||+.|++++.. |.||.+.
T Consensus 289 -~~d~~e~l~f~~~g~Ikp~--i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 289 -RADLEEALDFAAEGKIKPE--ILETIPLDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred -HHHHHHHHHHHHhCCceee--EEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence 3689999999999998754 43799999999999999999987 9998874
|
|
| >KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-59 Score=405.13 Aligned_cols=341 Identities=27% Similarity=0.415 Sum_probs=296.7
Q ss_pred CcceEEeecCCCCeEEEEeeCCCC-CCCeEEEEEeeeecCccccccccCCCCCC---CCCcccccceeEEEEEeCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEG---LFPCILGHEAAGIVESVGEGVTE 76 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~---~~p~v~G~e~~G~V~~~G~~v~~ 76 (371)
+|+|+++.++++ +++.+.|.|++ .|+||+|++.++|||++|+|.++...... +.|+++|||.+|+|+++|+.|++
T Consensus 4 ~~~A~vl~g~~d-i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk~ 82 (354)
T KOG0024|consen 4 DNLALVLRGKGD-IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVKH 82 (354)
T ss_pred ccceeEEEccCc-eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhcccccc
Confidence 489999999999 99999999987 99999999999999999999997655333 58999999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecC
Q 017431 77 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 156 (371)
Q Consensus 77 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP 156 (371)
+++||||++.|..+|+.|++|+.|.+|+|...... +..+.+| ++++|++.++++++|||
T Consensus 83 LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~---atpp~~G------------------~la~y~~~~~dfc~KLP 141 (354)
T KOG0024|consen 83 LKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFC---ATPPVDG------------------TLAEYYVHPADFCYKLP 141 (354)
T ss_pred cccCCeEEecCCCccccchhhhCcccccCCccccc---cCCCcCC------------------ceEEEEEechHheeeCC
Confidence 99999999999999999999999999999987753 2222445 99999999999999999
Q ss_pred CCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEe
Q 017431 157 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 236 (371)
Q Consensus 157 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi 236 (371)
|++|++++|++. +++++|+|. +++++++|++|||+|||++|+.+...||++|+.+|+.++..++|++++++||++.+.
T Consensus 142 d~vs~eeGAl~e-PLsV~~HAc-r~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~ 219 (354)
T KOG0024|consen 142 DNVSFEEGALIE-PLSVGVHAC-RRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTD 219 (354)
T ss_pred CCCchhhccccc-chhhhhhhh-hhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEe
Confidence 999999999887 799999986 889999999999999999999999999999999999999999999999999998876
Q ss_pred cCCCCC--chHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEee
Q 017431 237 NPKDHD--KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGT 312 (371)
Q Consensus 237 ~~~~~~--~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~ 312 (371)
+..... ..+.+.+....+. .+|+.|||+|...+++.++.+++.+ |++++.|.-. ...+++..... +++.++|+
T Consensus 220 ~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~g-Gt~vlvg~g~--~~~~fpi~~v~~kE~~~~g~ 296 (354)
T KOG0024|consen 220 PSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSG-GTVVLVGMGA--EEIQFPIIDVALKEVDLRGS 296 (354)
T ss_pred eccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccC-CEEEEeccCC--CccccChhhhhhheeeeeee
Confidence 654422 2333444444444 6999999999999999999999996 9999888743 34566655543 48889888
Q ss_pred ecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCe--eEEEEecCC
Q 017431 313 AFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDC--LRCVLKMQD 371 (371)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~--~kvvl~~~d 371 (371)
+-. ...+++..++++++|++++++++++.|+++++.+||+.+..++. .|+++...+
T Consensus 297 fry---~~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~ 354 (354)
T KOG0024|consen 297 FRY---CNGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGPE 354 (354)
T ss_pred eee---ccccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence 643 23589999999999999999999999999999999999988774 499998754
|
|
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-56 Score=386.29 Aligned_cols=341 Identities=30% Similarity=0.472 Sum_probs=299.0
Q ss_pred CcceEEeecCCC--CeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 017431 1 MCKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 1 ~~~a~~~~~~~~--~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
+.+++.+..+++ ++++.+++.|++.++||+|+|+++|||++|++.+.|.++..++|.++|||++|+|+++|++|++|+
T Consensus 9 k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~VvkvGs~V~~~k 88 (360)
T KOG0023|consen 9 KQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKVGSNVTGFK 88 (360)
T ss_pred hhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEECCCccccc
Confidence 357889999988 578899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEE-eecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCC
Q 017431 79 PGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 157 (371)
Q Consensus 79 ~Gd~V-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~ 157 (371)
+|||| +-....+|..|++|+.++++.|.+. ...+.|+. .||.+ .+|+|++|+++++.++++||+
T Consensus 89 iGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~-~~t~~g~~-~DGt~-------------~~ggf~~~~~v~~~~a~kIP~ 153 (360)
T KOG0023|consen 89 IGDRVGVGWLNGSCLSCEYCKSGNENYCPKM-HFTYNGVY-HDGTI-------------TQGGFQEYAVVDEVFAIKIPE 153 (360)
T ss_pred ccCeeeeeEEeccccCccccccCCcccCCce-eEeccccc-cCCCC-------------ccCccceeEEEeeeeEEECCC
Confidence 99999 4555778999999999999999963 22345555 66633 346899999999999999999
Q ss_pred CCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHHhcCCcEEe
Q 017431 158 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP-KKFDRAKNFGVTEFV 236 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~-~~~~~~~~~g~~~vi 236 (371)
+++.+.||.+.|+..|.|.+| ...++.||++|-|.|+|++|.+++|+||+||+ +|+++++++ +|.+.++.||++..+
T Consensus 154 ~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~LGAd~fv 231 (360)
T KOG0023|consen 154 NLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSLGADVFV 231 (360)
T ss_pred CCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhcCcceeE
Confidence 999999999999999999998 66778899999999997799999999999999 999998887 677788899999988
Q ss_pred cCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheee-ceEEEeeecC
Q 017431 237 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG 315 (371)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~ 315 (371)
+..+ +.++.+.+.+.+++++|-+.+. ..+.++.++.+|+.+ |++|.+|.+.. .+.++.+++.- .+++.|+..+
T Consensus 232 ~~~~-d~d~~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~-Gt~V~vg~p~~--~~~~~~~~lil~~~~I~GS~vG 305 (360)
T KOG0023|consen 232 DSTE-DPDIMKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVN-GTLVLVGLPEK--PLKLDTFPLILGRKSIKGSIVG 305 (360)
T ss_pred EecC-CHHHHHHHHHhhcCcceeeeec--cccchHHHHHHhhcC-CEEEEEeCcCC--cccccchhhhcccEEEEeeccc
Confidence 8773 3889999999988888888876 335699999999997 99999999754 66777777655 7899999887
Q ss_pred CCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecC
Q 017431 316 GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 370 (371)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~ 370 (371)
+. .+.++++++.+++.++.. ....+++++++||+.|++++.. |.||.+.
T Consensus 306 ~~---ket~E~Ldf~a~~~ik~~---IE~v~~~~v~~a~erm~kgdV~yRfVvD~s 355 (360)
T KOG0023|consen 306 SR---KETQEALDFVARGLIKSP---IELVKLSEVNEAYERMEKGDVRYRFVVDVS 355 (360)
T ss_pred cH---HHHHHHHHHHHcCCCcCc---eEEEehhHHHHHHHHHHhcCeeEEEEEEcc
Confidence 54 689999999999998754 4788999999999999999997 9998864
|
|
| >TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-55 Score=415.13 Aligned_cols=368 Identities=66% Similarity=1.150 Sum_probs=305.7
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
+|||+++..++++++++++|.|+|.++||+|||.++++|++|++.+.|..+...+|.++|||++|+|+++|+++++|++|
T Consensus 1 ~~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~G 80 (368)
T TIGR02818 1 KSRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVG 80 (368)
T ss_pred CceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCC
Confidence 58999999998889999999999999999999999999999999999887655689999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|||++.+..+|+.|.+|+.+..++|.+.......|.. .+|..++..+|...+++.+.|+|+||+.+|.+.++++|++++
T Consensus 81 drV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~ 159 (368)
T TIGR02818 81 DHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLM-PDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAP 159 (368)
T ss_pred CEEEEcCCCCCCCChhhhCCCcccccCcccccccccc-cCCccccccCCCcccccccCccceeeEEechhheEECCCCCC
Confidence 9999999999999999999999999865432222322 122111111222223333457999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
+++|+.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+++|+++|+++++++++.++++++|++.++++.+
T Consensus 160 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~ 239 (368)
T TIGR02818 160 LEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPND 239 (368)
T ss_pred HHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcccc
Confidence 99999999999999999888889999999999999999999999999999977999999999999999999999998765
Q ss_pred CCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCCccc
Q 017431 241 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSR 320 (371)
Q Consensus 241 ~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 320 (371)
.+.++.+.+.+++++++|++|||+|++..+..+++++++++|+++.+|.......+++.+..+..+..+.++..+....+
T Consensus 240 ~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 319 (368)
T TIGR02818 240 YDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAFGGVKGR 319 (368)
T ss_pred cchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhccceEEEeeccCCCcH
Confidence 33456677778877789999999998788999999998733999999975433334444444444445666655443334
Q ss_pred CcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEec
Q 017431 321 SQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 369 (371)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~ 369 (371)
.++++++++++++++++.++++++|+|+|+++|++.+.+++..|++|++
T Consensus 320 ~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~k~~v~~ 368 (368)
T TIGR02818 320 TELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKSIRTVIHY 368 (368)
T ss_pred HHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCceeEEeeC
Confidence 5789999999999998888899999999999999999888777999875
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols. |
| >cd08300 alcohol_DH_class_III class III alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-54 Score=411.29 Aligned_cols=367 Identities=78% Similarity=1.281 Sum_probs=309.5
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
+|||+++..+++++++++.|.|+|.++||+|||+++++|++|++.+.|..+...+|.++|||++|+|+++|+++++|++|
T Consensus 2 ~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vG 81 (368)
T cd08300 2 TCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPG 81 (368)
T ss_pred cceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCCC
Confidence 68999999998889999999999999999999999999999999998877655789999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|||++.+..+|+.|.+|+.+..+.|.+.....+.|.. .+|..++..+|...+++.+.|+|+||+.++.+.++++|++++
T Consensus 82 drV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~ 160 (368)
T cd08300 82 DHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLM-PDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAP 160 (368)
T ss_pred CEEEEcCCCCCCCChhhcCCCcCcCCCcccccccccc-CCCccccccCCcccccccccccceeEEEEchhceEeCCCCCC
Confidence 9999999999999999999999999875432222322 222222222344444444567999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
+++|+.+++++.|||+++.+...+++|++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++|+++++++.+
T Consensus 161 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~ 240 (368)
T cd08300 161 LDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKD 240 (368)
T ss_pred hhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccc
Confidence 99999999999999999888889999999999999999999999999999977999999999999999999999998776
Q ss_pred CCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCCccc
Q 017431 241 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSR 320 (371)
Q Consensus 241 ~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 320 (371)
.+.++.+.+.+++++++|++||++|++..+..+++++++++|+++.+|....+..+++.+..+..+..+.++..+.+...
T Consensus 241 ~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 320 (368)
T cd08300 241 HDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAFGGWKSR 320 (368)
T ss_pred cchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEEEecccCcH
Confidence 32357777888887799999999998778999999998734999999875332334444444444456667766656556
Q ss_pred CcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEe
Q 017431 321 SQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 368 (371)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~ 368 (371)
++++++++++.++++++.++++++|+|+|+++|++.+.+++..|++|+
T Consensus 321 ~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~~k~~~~ 368 (368)
T cd08300 321 SQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKSIRTVVK 368 (368)
T ss_pred HHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCCceeeeC
Confidence 789999999999999988889999999999999999998887799875
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim |
| >PLN02740 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-54 Score=411.23 Aligned_cols=369 Identities=53% Similarity=1.027 Sum_probs=306.1
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQP 79 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~~~ 79 (371)
+|||+++.+++++++++++|.|+|.++||+|||+++++|++|++.+.|..+. ..+|.++|||++|+|+++|+++++|++
T Consensus 10 ~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~v 89 (381)
T PLN02740 10 TCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVEDLKA 89 (381)
T ss_pred eeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCCCcCCC
Confidence 4999999999988999999999999999999999999999999999987642 357899999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCcccccc--CCcceeeccCCcceeeeEEecccceEecCC
Q 017431 80 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSI--NGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 157 (371)
Q Consensus 80 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~--~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~ 157 (371)
||||++.+..+|+.|.+|..+..+.|.+.......+....+|..+... .+...+++...|+|+||++++.+.++++|+
T Consensus 90 GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~ 169 (381)
T PLN02740 90 GDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKIDP 169 (381)
T ss_pred CCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeEECCC
Confidence 999999999999999999999999998765321110000011000000 011112223357999999999999999999
Q ss_pred CCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 158 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
++++++++.+++++.|||+++++..++++|++|||+|+|++|++++|+|+.+|+++|++++++++|.++++++|++++++
T Consensus 170 ~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~ 249 (381)
T PLN02740 170 NAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDFIN 249 (381)
T ss_pred CCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcEEEe
Confidence 99999999999999999998888899999999999999999999999999999967999999999999999999999998
Q ss_pred CCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCC
Q 017431 238 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF 317 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 317 (371)
+.+.+.++.+.+++++++++|++||++|++..+..+++++++++|+++.+|.......+++.+..+.+++++.|+..+.+
T Consensus 250 ~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 329 (381)
T PLN02740 250 PKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSITGSVFGDF 329 (381)
T ss_pred cccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeEEEEecCCC
Confidence 76533357777888776689999999999888999999998833999999976433334555444445788888877665
Q ss_pred cccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEec
Q 017431 318 KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 369 (371)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~ 369 (371)
....+++++++++.++++++.++++++|+|+|+++|++.+.+++..|++|++
T Consensus 330 ~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~k~~~~~ 381 (381)
T PLN02740 330 KGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKALRCLLHL 381 (381)
T ss_pred CcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCceeEEEeC
Confidence 4445789999999999998888899999999999999999988878999874
|
|
| >cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-54 Score=410.38 Aligned_cols=360 Identities=41% Similarity=0.715 Sum_probs=303.7
Q ss_pred cceEEeecCCC--------CeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCC
Q 017431 2 CKAAVAWEPNK--------PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 73 (371)
Q Consensus 2 ~~a~~~~~~~~--------~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~ 73 (371)
|||+++.++|+ +++++++|.|+|.++||+|||.+++||++|++.+.|..+. .+|.++|||++|+|+++|++
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~~-~~p~i~GhE~~G~V~~vG~~ 79 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPR-PLPMALGHEAAGVVVEVGEG 79 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCCC-CCCccCCccceeEEEEeCCC
Confidence 89999999874 3999999999999999999999999999999999887543 47899999999999999999
Q ss_pred CCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceE
Q 017431 74 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVA 153 (371)
Q Consensus 74 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~ 153 (371)
++++++||||++.+..+|+.|..|+.+.++.|.+.......|.. .+|..++..++....+..+.|+|++|+.++++.++
T Consensus 80 v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~ 158 (371)
T cd08281 80 VTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTL-LSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVV 158 (371)
T ss_pred CCcCCCCCEEEEccCCCCCCCccccCCCcccccCcccccccccc-ccCcccccccCcccccccCcccceeeEEecccceE
Confidence 99999999999988889999999999999999876543222322 22211111112112223344699999999999999
Q ss_pred ecCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCc
Q 017431 154 KIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 233 (371)
Q Consensus 154 ~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~ 233 (371)
++|+++++++|+.++++++|||+++.+..++++|++|||.|+|++|++++|+|+.+|+++|++++++++|+++++++|++
T Consensus 159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~ 238 (371)
T cd08281 159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGAT 238 (371)
T ss_pred ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCc
Confidence 99999999999999999999999988888999999999999999999999999999997799999999999999999999
Q ss_pred EEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEee
Q 017431 234 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGT 312 (371)
Q Consensus 234 ~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~ 312 (371)
+++++.+ .++.+.+++.+++++|++|||+|.+..+..++++++++ |+++.+|.......++++...+. +++++.|+
T Consensus 239 ~~i~~~~--~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~ 315 (371)
T cd08281 239 ATVNAGD--PNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVAEERTLKGS 315 (371)
T ss_pred eEeCCCc--hhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCCCceeeecHHHHhhcCCEEEEE
Confidence 9998876 67778888887778999999999878899999999996 99999987543234455555444 48899998
Q ss_pred ecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEE
Q 017431 313 AFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCV 366 (371)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvv 366 (371)
....+...++++.++++++++++++.++++++|+|+|+++|++.+.+++.. |+|
T Consensus 316 ~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi 370 (371)
T cd08281 316 YMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVI 370 (371)
T ss_pred ecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeee
Confidence 776554456789999999999999888899999999999999999998887 544
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd |
| >cd08301 alcohol_DH_plants Plant alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-54 Score=407.53 Aligned_cols=367 Identities=65% Similarity=1.164 Sum_probs=309.8
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
+|||+++.+++++++++++|+|+|+++||+|||.++++|++|++.+.|..+...+|.++|||++|+|+++|+++++|++|
T Consensus 2 ~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 81 (369)
T cd08301 2 TCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKPG 81 (369)
T ss_pred ccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCccccC
Confidence 69999999998889999999999999999999999999999999999877655789999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|||++.+..+|+.|.+|+.+.++.|.........|....++..++...|...+++...|+|++|+.++.+.++++|++++
T Consensus 82 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~ 161 (369)
T cd08301 82 DHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAP 161 (369)
T ss_pred CEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCCC
Confidence 99999999999999999999999998764321122111111111122233334444457999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
+++|+.+++++.|||++++...++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.++++++|++.++++.+
T Consensus 162 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~ 241 (369)
T cd08301 162 LDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPKD 241 (369)
T ss_pred HHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcccc
Confidence 99999999999999998888889999999999999999999999999999877999999999999999999998888765
Q ss_pred CCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCCccc
Q 017431 241 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSR 320 (371)
Q Consensus 241 ~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 320 (371)
.+..+.+.+++.+++++|++||++|+...+..+++++++++|+++.+|....+..+++.+..+.+++++.|+....+..+
T Consensus 242 ~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 321 (369)
T cd08301 242 HDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTLFGGYKPK 321 (369)
T ss_pred cchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEecCCCChH
Confidence 33456677777776689999999998778899999999922999999986433345555544556889999877666555
Q ss_pred CcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEE
Q 017431 321 SQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVL 367 (371)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl 367 (371)
.+++.+++++.++++++.++++++|+|+|+++|++.+++++..|++|
T Consensus 322 ~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~ 368 (369)
T cd08301 322 TDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECLRCIL 368 (369)
T ss_pred HHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCceeEEe
Confidence 67899999999999988888899999999999999999998889887
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the |
| >TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-53 Score=399.63 Aligned_cols=356 Identities=36% Similarity=0.619 Sum_probs=300.8
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
||||+++.+++++++++++|.|+|.++||+|||.++++|++|++.+.|..+. .+|.++|||++|+|+++|+++++|++|
T Consensus 1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~~-~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (358)
T TIGR03451 1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIND-EFPFLLGHEAAGVVEAVGEGVTDVAPG 79 (358)
T ss_pred CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCccc-cCCcccccceEEEEEEeCCCCcccCCC
Confidence 7999999999999999999999999999999999999999999999887543 478999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|||++.+..+|+.|..|+.++.+.|....... ......+| -...+..+.|+|+||+.++++.++++|++++
T Consensus 80 drV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~-~~~~~~~g--------~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~ 150 (358)
T TIGR03451 80 DYVVLNWRAVCGQCRACKRGRPWYCFDTHNAT-QKMTLTDG--------TELSPALGIGAFAEKTLVHAGQCTKVDPAAD 150 (358)
T ss_pred CEEEEccCCCCCCChHHhCcCcccCcCccccc-cccccccC--------cccccccccccccceEEEehhheEECCCCCC
Confidence 99999999999999999999999997532110 00000001 0000111246999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
+++|+.+++.+.++|+++.+...+++|++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++|+++++++.+
T Consensus 151 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~ 230 (358)
T TIGR03451 151 PAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSG 230 (358)
T ss_pred hhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCC
Confidence 99999999999999988878889999999999999999999999999999966999999999999999999999998876
Q ss_pred CCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecCCCc
Q 017431 241 HDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFK 318 (371)
Q Consensus 241 ~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~ 318 (371)
.++.+.+.+.+++ ++|++|||+|++..++.++++++++ |+++.+|........+++...+. ++.++.+++.....
T Consensus 231 --~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 307 (358)
T TIGR03451 231 --TDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCL 307 (358)
T ss_pred --cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCC
Confidence 6677888888887 8999999999877899999999996 99999997543233455544433 47888887654333
Q ss_pred ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEec
Q 017431 319 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 369 (371)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~ 369 (371)
..+++++++++++++++++.++++++|+++|+++|++.+++++..|+++.+
T Consensus 308 ~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~~ 358 (358)
T TIGR03451 308 PERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVLRSVVEL 358 (358)
T ss_pred cHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcceeEEeC
Confidence 346788999999999999888899999999999999999988878888753
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione. |
| >PLN02827 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-52 Score=395.47 Aligned_cols=364 Identities=53% Similarity=1.016 Sum_probs=297.4
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
+|||+++.++++.++++++|+|+|+++||+|||.++++|++|++.+.+.. .+|.++|||++|+|+++|+++++|++|
T Consensus 12 ~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~~v~~~~~G 88 (378)
T PLN02827 12 TCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGEGVTEFEKG 88 (378)
T ss_pred eeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCCCCcccCCC
Confidence 49999999988779999999999999999999999999999999887752 368899999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|||++.+..+|+.|.+|+.+.++.|.+.... ..|....++..++...|...+++...|+|++|+.++++.++++|++++
T Consensus 89 drV~~~~~~~cg~C~~C~~g~~~~C~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l~ 167 (378)
T PLN02827 89 DHVLTVFTGECGSCRHCISGKSNMCQVLGLE-RKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAP 167 (378)
T ss_pred CEEEEecCCCCCCChhhhCcCcccccCcccc-ccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCCC
Confidence 9999999999999999999999999864210 001000000000000010001111236999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
+++++.+++++.++|++++...++++|++|||+|+|++|++++|+|+++|+.+|+++++++++.++++++|+++++++.+
T Consensus 168 ~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~~~ 247 (378)
T PLN02827 168 LHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPND 247 (378)
T ss_pred HHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEcccc
Confidence 99999998898999988877788999999999999999999999999999967888988999999999999999998765
Q ss_pred CCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccc--hheeeceEEEeeecCCCc
Q 017431 241 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP--FQLVTGRVWKGTAFGGFK 318 (371)
Q Consensus 241 ~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~ 318 (371)
.+.++.+.+++.+++++|++||++|.+..+..+++.+++++|+++.+|..... ..+.. ..+.+++++.|+....+.
T Consensus 248 ~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~--~~~~~~~~~~~~~~~i~g~~~~~~~ 325 (378)
T PLN02827 248 LSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK--PEVSAHYGLFLSGRTLKGSLFGGWK 325 (378)
T ss_pred cchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCC--ccccccHHHHhcCceEEeeecCCCc
Confidence 32467777888776689999999999777999999999933999999975432 23322 233458899988776554
Q ss_pred ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEecC
Q 017431 319 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKMQ 370 (371)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~~ 370 (371)
...++..++++++++++++.++++++|+|+|+++|++.+.+++..|+||.+-
T Consensus 326 ~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~~k~vi~~~ 377 (378)
T PLN02827 326 PKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKCLRCVIHMP 377 (378)
T ss_pred hhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCceEEEEEec
Confidence 4457889999999999998778999999999999999999988789999863
|
|
| >cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-52 Score=393.76 Aligned_cols=364 Identities=62% Similarity=1.103 Sum_probs=305.5
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
+|||+++.+.+++++++++|.|++.++||+|||.++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++++++|
T Consensus 2 ~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~G 80 (365)
T cd08277 2 KCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLKPG 80 (365)
T ss_pred ccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCCCC
Confidence 589999999888899999999999999999999999999999999988765 4578999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|+|++.+..+|+.|.+|..+..++|++.... ..|.. .++.......|+..+++.+.|+|++|+.++.+.++++|++++
T Consensus 81 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~g~~-~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~ 158 (365)
T cd08277 81 DKVIPLFIGQCGECSNCRSGKTNLCQKYRAN-ESGLM-PDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAP 158 (365)
T ss_pred CEEEECCCCCCCCCchhcCcCcccCcCcccc-ccccc-cCCccccccCCcccccccccccceeeEEEchhheEECCCCCC
Confidence 9999999999999999999999999876532 11221 222111112233333333457999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
+++|+.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|++++++..+
T Consensus 159 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~ 238 (365)
T cd08277 159 LEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKD 238 (365)
T ss_pred HHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEecccc
Confidence 99999999999999998888889999999999999999999999999999977999999999999999999999988765
Q ss_pred CCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCCccc
Q 017431 241 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSR 320 (371)
Q Consensus 241 ~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 320 (371)
.+..+.+.+++.+++++|++|||+|+...+..+++++++++|+++.+|... +...++++..+..++++.++..+.+...
T Consensus 239 ~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 317 (365)
T cd08277 239 SDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPP-GAELSIRPFQLILGRTWKGSFFGGFKSR 317 (365)
T ss_pred ccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCC-ccccccCHhHHhhCCEEEeeecCCCChH
Confidence 333456677777766899999999987888999999987349999998753 2233445544445788888877666545
Q ss_pred CcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEe
Q 017431 321 SQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 368 (371)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~ 368 (371)
.++++++++++++.+++.++++++|+|+|+++|++.+.+++..|++|+
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~i~ 365 (365)
T cd08277 318 SDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGECIRTVIT 365 (365)
T ss_pred HHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCCceEeeC
Confidence 678999999999999888889999999999999999998886798874
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i |
| >cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-51 Score=385.70 Aligned_cols=337 Identities=28% Similarity=0.438 Sum_probs=289.4
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
|||+++.+++. ++++++|.|+|.++||+||+.++++|++|++.+.+.... ..+|.++|||++|+|+++|++++++++|
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (339)
T cd08239 1 MRGAVFPGDRT-VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVG 79 (339)
T ss_pred CeEEEEecCCc-eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCC
Confidence 89999998765 999999999999999999999999999999988776432 2358899999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|+|++.+..+|+.|..|+.++++.|..... .+|.. .+ |+|++|+.++.+.++++|++++
T Consensus 80 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~--~~g~~-~~------------------G~~ae~~~v~~~~~~~~P~~~~ 138 (339)
T cd08239 80 DRVMVYHYVGCGACRNCRRGWMQLCTSKRA--AYGWN-RD------------------GGHAEYMLVPEKTLIPLPDDLS 138 (339)
T ss_pred CEEEECCCCCCCCChhhhCcCcccCcCccc--ccccC-CC------------------CcceeEEEechHHeEECCCCCC
Confidence 999999999999999999999999986542 22322 23 4999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
+++|+.+++++.|||+++ ...++++|++|||+|+|++|++++|+|+++|+++|+++++++++.++++++|+++++++++
T Consensus 139 ~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~ 217 (339)
T cd08239 139 FADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ 217 (339)
T ss_pred HHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc
Confidence 999999999999999987 5577899999999999999999999999999955999999999999999999999998876
Q ss_pred CCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCCcc
Q 017431 241 HDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS 319 (371)
Q Consensus 241 ~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 319 (371)
.+ .+.+.+.+++ ++|++|||+|+...+..++++++++ |+++.+|.... ..+......+.+++++.|+....
T Consensus 218 --~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~--- 289 (339)
T cd08239 218 --DD-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGGE-LTIEVSNDLIRKQRTLIGSWYFS--- 289 (339)
T ss_pred --ch-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCCC-cccCcHHHHHhCCCEEEEEecCC---
Confidence 44 5667777777 8999999999977778999999996 99999987532 22222122233588888876543
Q ss_pred cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEec
Q 017431 320 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 369 (371)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~ 369 (371)
.++++++++++.++++++.++++++|+|+|+++|++.++++...|+||++
T Consensus 290 ~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~gKvvi~~ 339 (339)
T cd08239 290 VPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGESGKVVFVF 339 (339)
T ss_pred HHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCCceEEEEeC
Confidence 35789999999999998888899999999999999999887756999875
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at |
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-50 Score=375.95 Aligned_cols=335 Identities=21% Similarity=0.299 Sum_probs=275.8
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCcccccccc-CCCC--CCCCCcccccceeEEEEEeCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWS-GKDP--EGLFPCILGHEAAGIVESVGEGVTEV 77 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~-g~~~--~~~~p~v~G~e~~G~V~~~G~~v~~~ 77 (371)
+|||+++.+++. +++++.|.| +.++||+|||.+++||++|++.+. |..+ ..++|.++|||++|+|+++ ++++|
T Consensus 4 ~~~~~~~~~~~~-~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~~ 79 (343)
T PRK09880 4 KTQSCVVAGKKD-VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSGL 79 (343)
T ss_pred cceEEEEecCCc-eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCccC
Confidence 479999998888 999999997 689999999999999999999875 4332 2357999999999999999 67899
Q ss_pred CCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCC
Q 017431 78 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 157 (371)
Q Consensus 78 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~ 157 (371)
++||||++.+..+|+.|.+|+.+.++.|.+... +|.... +....|+|+||++++++.++++|+
T Consensus 80 ~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~~--------------~~~~~G~~aey~~v~~~~~~~~P~ 142 (343)
T PRK09880 80 KEGQTVAINPSKPCGHCKYCLSHNENQCTTMRF---FGSAMY--------------FPHVDGGFTRYKVVDTAQCIPYPE 142 (343)
T ss_pred CCCCEEEECCCCCCcCChhhcCCChhhCCCcce---eecccc--------------cCCCCCceeeeEEechHHeEECCC
Confidence 999999999999999999999999999987542 221100 000124999999999999999999
Q ss_pred CCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 158 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
++++++++ +..++++||+++.+ ....+|++|||+|+|++|++++|+|+++|+++|++++++++++++++++|++++++
T Consensus 143 ~l~~~~aa-~~~~~~~a~~al~~-~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~ 220 (343)
T PRK09880 143 KADEKVMA-FAEPLAVAIHAAHQ-AGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVN 220 (343)
T ss_pred CCCHHHHH-hhcHHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEec
Confidence 99987655 44578899998744 45668999999999999999999999999978999999999999999999999998
Q ss_pred CCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeeecCC
Q 017431 238 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGG 316 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~ 316 (371)
+.+ .++.+.. +. .+++|++|||+|++.+++.++++++++ |+++.+|.... ..+++...+ .+++++.++...
T Consensus 221 ~~~--~~~~~~~-~~-~g~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~k~~~i~g~~~~- 292 (343)
T PRK09880 221 PQN--DDLDHYK-AE-KGYFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGGA--PPEFPMMTLIVKEISLKGSFRF- 292 (343)
T ss_pred CCc--ccHHHHh-cc-CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC--CCccCHHHHHhCCcEEEEEeec-
Confidence 876 3443322 22 236999999999977899999999997 99999997532 234444443 347888887532
Q ss_pred CcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 317 FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
.+++++++++++++++++.++++++|+|+|+++|++.+.+++.. |++|.+
T Consensus 293 ---~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 293 ---TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred ---cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 35799999999999999888899999999999999999887764 999874
|
|
| >COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-49 Score=371.01 Aligned_cols=342 Identities=28% Similarity=0.396 Sum_probs=280.5
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCc-ccccceeEEEEEeCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPC-ILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~-v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
|++++++.+++...+++.+.|.+.+++|+|||.++|||++|++.++|..+....|. ++|||++|+|+++| .++.+++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~G 79 (350)
T COG1063 1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVG 79 (350)
T ss_pred CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCC
Confidence 67888888776455777877778999999999999999999999999877766666 89999999999999 77889999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceec-CCCccccccCCcceeeccCCcceeeeEEecccceEe-cCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM-NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK-IDPQ 158 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~-lP~~ 158 (371)
|||++.+..+|+.|.+|+.+.++.|.+.+......... .+| +|+||+++|.++.++ +|++
T Consensus 80 drVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G------------------~~aEyv~vp~~~~~~~~pd~ 141 (350)
T COG1063 80 DRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDG------------------GFAEYVRVPADFNLAKLPDG 141 (350)
T ss_pred CEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCC------------------ceEEEEEeccccCeecCCCC
Confidence 99999999999999999999999999554321111110 234 999999999765555 4888
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCcEEec
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVN 237 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~-~g~~~vi~ 237 (371)
+ +.+++++.-++.++|++........++.+|+|+|+|++|++++++++.+|+.+|++++.+++|++++++ .|++.+++
T Consensus 142 ~-~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~ 220 (350)
T COG1063 142 I-DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVN 220 (350)
T ss_pred C-ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeec
Confidence 8 566667777999998874455556666699999999999999999999999999999999999999999 66665665
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeeecC
Q 017431 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFG 315 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~ 315 (371)
..+ .+....+.+.+++ ++|++|||+|.+.+++.+++.++++ |+++.+|.+..... .++...+ .+++++.|+...
T Consensus 221 ~~~--~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~g-G~v~~vGv~~~~~~-~~~~~~~~~kel~l~gs~~~ 296 (350)
T COG1063 221 PSE--DDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDI-PLPAGLVVSKELTLRGSLRP 296 (350)
T ss_pred Ccc--ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCC-CEEEEEeccCCccC-ccCHHHHHhcccEEEeccCC
Confidence 544 3566778889988 9999999999999999999999996 99999998753322 3333333 458999998421
Q ss_pred CCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCe--eEEEEec
Q 017431 316 GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDC--LRCVLKM 369 (371)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~--~kvvl~~ 369 (371)
....+++.++++++++++++.+++++.++++++++|++.+.+.+. .|+++++
T Consensus 297 --~~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 297 --SGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred --CCcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 223589999999999999999999999999999999999987543 4999864
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-50 Score=367.90 Aligned_cols=315 Identities=26% Similarity=0.367 Sum_probs=264.5
Q ss_pred cceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCC-CCCCCCCcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK-DPEGLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~-~~~~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
||++++.+.++| ++++++|.|.|.++||+|||++++||+.|.+..+|. .+..++|.++|.|++|+|+++|+.|+.|+
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~ 80 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK 80 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence 899999999987 889999999999999999999999999999999997 33446899999999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||||+..+ ..| . .|+|+||+.+|++.++++|++
T Consensus 81 ~GdrV~~~~-~~~---------------------------~------------------~G~~AEy~~v~a~~~~~~P~~ 114 (326)
T COG0604 81 VGDRVAALG-GVG---------------------------R------------------DGGYAEYVVVPADWLVPLPDG 114 (326)
T ss_pred CCCEEEEcc-CCC---------------------------C------------------CCcceeEEEecHHHceeCCCC
Confidence 999998652 000 1 249999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
+|+++||+++++++|||++++...++++|++|||+|+ |++|.+++||||++|+ .++++.+++++.++++++|++++++
T Consensus 115 ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~ 193 (326)
T COG0604 115 LSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVIN 193 (326)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEc
Confidence 9999999999999999999999999999999999976 9999999999999998 6666667777777999999999999
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecC
Q 017431 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFG 315 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~ 315 (371)
+.+ .+|.+.+++++++ ++|+|+|++|+ +.+..++++|+++ |+++.+|.........++...+. +..+..++...
T Consensus 194 y~~--~~~~~~v~~~t~g~gvDvv~D~vG~-~~~~~~l~~l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~ 269 (326)
T COG0604 194 YRE--EDFVEQVRELTGGKGVDVVLDTVGG-DTFAASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLG 269 (326)
T ss_pred CCc--ccHHHHHHHHcCCCCceEEEECCCH-HHHHHHHHHhccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEecce
Confidence 988 6699999999999 99999999999 5588899999997 99999998642233344433333 26666666654
Q ss_pred CC---cccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCC-Cee-EEEEec
Q 017431 316 GF---KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGG-DCL-RCVLKM 369 (371)
Q Consensus 316 ~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~-~~~-kvvl~~ 369 (371)
.. ...+.+.++.+++.++++++ .+.++|||+|..+|....... +.. |+||++
T Consensus 270 ~~~~~~~~~~~~~l~~~~~~g~l~~--~i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 270 SRDPEALAEALAELFDLLASGKLKP--VIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred ecchHHHHHHHHHHHHHHHcCCCcc--eeccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence 33 11345667899999999764 477999999966666644443 554 999874
|
|
| >TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-49 Score=376.12 Aligned_cols=345 Identities=24% Similarity=0.367 Sum_probs=273.1
Q ss_pred cceEEeecCCCCeEEEEeeCCCCC-------CCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQ-------AGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGV 74 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~-------~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v 74 (371)
|||+++.++++ ++++++|.|+|+ ++||+|||+++|||++|++.+.|..+. .+|.++|||++|+|+++|++|
T Consensus 3 mka~v~~~~~~-~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~~-~~p~i~GhE~~G~V~~vG~~V 80 (393)
T TIGR02819 3 NRGVVYLGPGK-VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTTA-PTGLVLGHEITGEVIEKGRDV 80 (393)
T ss_pred ceEEEEecCCc-eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCCC-CCCccccceeEEEEEEEcCcc
Confidence 89999999887 999999999874 689999999999999999999886543 478999999999999999999
Q ss_pred CCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCC---ccceecCCCccccccCCcceeeccCCcceeeeEEeccc-
Q 017431 75 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGAT---GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV- 150 (371)
Q Consensus 75 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~- 150 (371)
++|++||||++.+..+|+.|.+|+.++++.|.+..... .+|.... | . -.|+|+||+.+|..
T Consensus 81 ~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~-~------------~--~~G~~aey~~v~~~~ 145 (393)
T TIGR02819 81 EFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDM-G------------G--WVGGQSEYVMVPYAD 145 (393)
T ss_pred ccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceeccccc-C------------C--CCCceEEEEEechhh
Confidence 99999999999999999999999999999998643110 1121000 0 0 02499999999964
Q ss_pred -ceEecCCCCCc----chhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 017431 151 -SVAKIDPQAPL----DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD 225 (371)
Q Consensus 151 -~v~~lP~~~~~----~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~ 225 (371)
.++++|++++. .+++.+..++.++|+++ ...++++|++|||.|+|++|++++|+|+.+|++.|++++++++|.+
T Consensus 146 ~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~ 224 (393)
T TIGR02819 146 FNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLA 224 (393)
T ss_pred CceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHH
Confidence 79999998754 34677777899999987 4578999999999989999999999999999966777778888999
Q ss_pred HHHhcCCcEEecCCCCCchHHHHHHhhcCC-CccEEEEccCCH--------------HHHHHHHHHhccCCceEEEEccC
Q 017431 226 RAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNV--------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 226 ~~~~~g~~~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~--------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+++++|++. +++.. +.++.+.+.+++++ ++|++||++|.+ .+++.++++++++ |+++.+|.+
T Consensus 225 ~a~~~Ga~~-v~~~~-~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~i~~~G~~ 301 (393)
T TIGR02819 225 QARSFGCET-VDLSK-DATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVG-GAIGIPGLY 301 (393)
T ss_pred HHHHcCCeE-EecCC-cccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCC-CEEEEeeec
Confidence 999999974 44432 14566777888877 899999999985 4799999999997 999999986
Q ss_pred CCCCcc-----------cccchhe-eeceEEEeeecCCCcccCcHHHHHHHHHcCCCCCCCcee-eeeecccHHHHHHHH
Q 017431 291 ASGQEI-----------STRPFQL-VTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVT-HNMTLGEINEAFRYM 357 (371)
Q Consensus 291 ~~~~~~-----------~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~A~~~~ 357 (371)
..+... ++....+ .+++++.+.. ....+..+.+++++.++++++.++++ ++|+|+|+++||+.+
T Consensus 302 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~---~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~ 378 (393)
T TIGR02819 302 VTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQ---TPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEF 378 (393)
T ss_pred CCcccccccccccccccccchHHhhccCceEEecc---CChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHH
Confidence 321111 1111111 1234444421 11112346799999999999877776 789999999999999
Q ss_pred hCCCeeEEEEecC
Q 017431 358 HGGDCLRCVLKMQ 370 (371)
Q Consensus 358 ~~~~~~kvvl~~~ 370 (371)
.+++..|++|+++
T Consensus 379 ~~~~~~Kvvi~~~ 391 (393)
T TIGR02819 379 DAGAAKKFVIDPH 391 (393)
T ss_pred hhCCceEEEEeCC
Confidence 9887779999874
|
Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent. |
| >cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-48 Score=365.61 Aligned_cols=366 Identities=56% Similarity=0.960 Sum_probs=302.1
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
+||++++..+++++++++.|.|++.+++|+|||+++++|++|++.+.|... ..+|.++|||++|+|+++|++++.+++|
T Consensus 7 ~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~G 85 (373)
T cd08299 7 KCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTVKPG 85 (373)
T ss_pred eeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCccCCCC
Confidence 489999999988899999999999999999999999999999999988763 3478899999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|+|++.+..+|+.|.+|..+..+.|+........|.. .++..++..+|...+++.+.|+|++|++++.+.++++|++++
T Consensus 86 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l~ 164 (373)
T cd08299 86 DKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLM-QDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAP 164 (373)
T ss_pred CEEEECCCCCCCCChhhhCCCcccCcCcccccccccc-cCCccccccCCcccccccCCCcccceEEecccceeeCCCCCC
Confidence 9999999899999999999999999875432212221 222222333343444444467999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
+++++.+++++.+||+++....++++|++|||+|+|++|++++++|+.+|+.+|+++++++++++.++++|++++++..+
T Consensus 165 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~~~ 244 (373)
T cd08299 165 LEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQD 244 (373)
T ss_pred hHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecccc
Confidence 99999999999999998888899999999999999999999999999999877999999999999999999999888765
Q ss_pred CCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHh-ccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCCcc
Q 017431 241 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECC-HKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS 319 (371)
Q Consensus 241 ~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l-~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 319 (371)
...++.+.+.+++++++|+++||+|++..+..++..+ +++ |+++.+|.......+++.+..+.++.++.++..+.+..
T Consensus 245 ~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 323 (373)
T cd08299 245 YKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVFGGWKS 323 (373)
T ss_pred cchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccCCCCceeecCHHHHhcCCeEEEEEecCCcc
Confidence 3234666677776668999999999867788877765 465 99999997543334455543344567888887766655
Q ss_pred cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEec
Q 017431 320 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 369 (371)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~ 369 (371)
++++.++++.+.++.+++.++++++|+++++++|++.+.+++..|+++.+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~~k~~~~~ 373 (373)
T cd08299 324 KDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSIRTVLTF 373 (373)
T ss_pred HHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcceEEEeC
Confidence 56788888888888777777788999999999999999887777988864
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically |
| >PRK10309 galactitol-1-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-48 Score=362.46 Aligned_cols=338 Identities=22% Similarity=0.335 Sum_probs=279.5
Q ss_pred cceEEeecCCCCeEEEEeeCCCC-CCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
|||+++.+++. +++++.|.|+| .++||+|||.++++|++|++.+.+.. ...+|.++|||++|+|+++|+++++|++|
T Consensus 1 Mka~~~~~~~~-~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~vG 78 (347)
T PRK10309 1 MKSVVNDTDGI-VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG-AHYYPITLGHEFSGYVEAVGSGVDDLHPG 78 (347)
T ss_pred CceEEEeCCCc-eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC-CCCCCcccccceEEEEEEeCCCCCCCCCC
Confidence 89999999876 99999999987 59999999999999999987532211 12368899999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|+|++.+..+|+.|.+|+.+.++.|..... .|.. .+ |+|++|+.++.+.++++|++++
T Consensus 79 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~lP~~~s 136 (347)
T PRK10309 79 DAVACVPLLPCFTCPECLRGFYSLCAKYDF---IGSR-RD------------------GGNAEYIVVKRKNLFALPTDMP 136 (347)
T ss_pred CEEEECCCcCCCCCcchhCcCcccCCCcce---eccC-CC------------------CccceeEEeehHHeEECcCCCC
Confidence 999999999999999999999999975432 2221 23 4999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
+++|+.+. ++.++|+++ ....+++|++|||+|+|++|++++|+|+++|++.|+++++++++.++++++|+++++++++
T Consensus 137 ~~~aa~~~-~~~~~~~~~-~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~ 214 (347)
T PRK10309 137 IEDGAFIE-PITVGLHAF-HLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE 214 (347)
T ss_pred HHHhhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc
Confidence 99998774 455677764 6678899999999999999999999999999966889999999999999999999998765
Q ss_pred CCchHHHHHHhhcCC-Ccc-EEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccc-hhe-eeceEEEeeecCC
Q 017431 241 HDKPIQQVLVDLTDG-GVD-YSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP-FQL-VTGRVWKGTAFGG 316 (371)
Q Consensus 241 ~~~~~~~~~~~~~~g-g~d-vvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~-~~~~~~~g~~~~~ 316 (371)
.. .+.+.+.+.+ ++| ++|||+|+..++..++++++++ |+++.+|....+..++... ..+ .+++++.|+..+.
T Consensus 215 --~~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 290 (347)
T PRK10309 215 --MS-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNY 290 (347)
T ss_pred --cC-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccc
Confidence 33 3456677766 898 9999999987899999999997 9999999754321121111 122 3478899876543
Q ss_pred Cc--ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 317 FK--SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 317 ~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
.. ..+++++++++++++++++.++++++|+|+|+++|++.+.+++.. |+|+++
T Consensus 291 ~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 291 SSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred cCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence 21 135788999999999998888999999999999999999888765 999976
|
|
| >PLN02586 probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-48 Score=362.27 Aligned_cols=333 Identities=24% Similarity=0.364 Sum_probs=270.4
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 81 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd 81 (371)
+.++...+..+++++.+++.|+|.++||+|||.++++|++|++.+.|.++...+|.++|||++|+|+++|+++++|++||
T Consensus 13 ~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~vGd 92 (360)
T PLN02586 13 AFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKKFKEGD 92 (360)
T ss_pred eeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEEECCCCCccCCCC
Confidence 34445555555599999999999999999999999999999999988765446789999999999999999999999999
Q ss_pred EEeecCC-CCCCCCccccCCCCcccccccCCCc----cceecCCCccccccCCcceeeccCCcceeeeEEecccceEecC
Q 017431 82 HVIPCYQ-AECRECKFCKSGKTNLCGKVRGATG----AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 156 (371)
Q Consensus 82 ~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP 156 (371)
||++.+. .+|+.|.+|+.+.++.|.+...... .|.. .+ |+|+||+.++.+.++++|
T Consensus 93 rV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~-~~------------------G~~aey~~v~~~~~~~lP 153 (360)
T PLN02586 93 RVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTK-NY------------------GGYSDMIVVDQHFVLRFP 153 (360)
T ss_pred EEEEccccCcCCCCccccCCCcccCCCccccccccccCCCc-CC------------------CccceEEEEchHHeeeCC
Confidence 9986554 4799999999999999986542100 0111 12 499999999999999999
Q ss_pred CCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhh-HHHHHhcCCcEE
Q 017431 157 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK-FDRAKNFGVTEF 235 (371)
Q Consensus 157 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~-~~~~~~~g~~~v 235 (371)
+++++++|+.+++.+.|+|+++.....+++|++|||.|+|++|++++|+|+.+|+ +|++++.++++ .+.++++|++++
T Consensus 154 ~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~~~Ga~~v 232 (360)
T PLN02586 154 DNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAINRLGADSF 232 (360)
T ss_pred CCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHHhCCCcEE
Confidence 9999999999999999999988666777899999999999999999999999999 67777666554 557789999998
Q ss_pred ecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeec
Q 017431 236 VNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAF 314 (371)
Q Consensus 236 i~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~ 314 (371)
+++.+ . +.+.+.++ ++|++||++|.+.+++.++++++++ |+++.+|.... ..+++...+. ++..+.++..
T Consensus 233 i~~~~--~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~vG~~~~--~~~~~~~~~~~~~~~i~g~~~ 303 (360)
T PLN02586 233 LVSTD--P---EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVN-GKLITLGLPEK--PLELPIFPLVLGRKLVGGSDI 303 (360)
T ss_pred EcCCC--H---HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCC-cEEEEeCCCCC--CCccCHHHHHhCCeEEEEcCc
Confidence 87654 2 23444443 6999999999877899999999996 99999987532 2344444433 3666767654
Q ss_pred CCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 315 GGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
+. ..++++++++++++++++. + ++|+|+|+++|++.+.+++.. |+|+++
T Consensus 304 ~~---~~~~~~~~~li~~g~i~~~--~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 304 GG---IKETQEMLDFCAKHNITAD--I-ELIRMDEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred CC---HHHHHHHHHHHHhCCCCCc--E-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 32 2578999999999998753 3 689999999999999998875 999886
|
|
| >cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-47 Score=360.08 Aligned_cols=364 Identities=56% Similarity=0.993 Sum_probs=311.7
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 81 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd 81 (371)
|||+++.+.+.++++++.|+|.+.+++|+|++.++++|++|++.+.|... ..+|.++|||++|+|+++|++++.+++||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd 79 (365)
T cd05279 1 CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKPGD 79 (365)
T ss_pred CceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCCC
Confidence 68999999988899999999999999999999999999999999888754 34678999999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCc
Q 017431 82 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 161 (371)
Q Consensus 82 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~ 161 (371)
+|++.+..+|+.|.+|+.+..+.|.........|.. .+|..+.--+|...+|+.+.|+|++|+.++.+.++++|+++++
T Consensus 80 ~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~ 158 (365)
T cd05279 80 KVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLM-SDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPL 158 (365)
T ss_pred EEEEcCCCCCCCChhhcCCCcccCCCcccccccccc-cCCcceeeccCCccccccccccccceEEecCCceEECCCCCCH
Confidence 999998899999999999999999987765555543 4554444445555666677789999999999999999999999
Q ss_pred chhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCC
Q 017431 162 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241 (371)
Q Consensus 162 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~ 241 (371)
++|+.+++++.+||+++.....+.+|++|||+|+|++|++++++|+.+|+..|+++++++++.++++++|++++++..+.
T Consensus 159 ~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~ 238 (365)
T cd05279 159 EKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQ 238 (365)
T ss_pred HHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccccc
Confidence 99999999999999998888999999999999889999999999999999668888889999999999999999887663
Q ss_pred CchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhc-cCCceEEEEccCCCCCcccccchheeeceEEEeeecCCCccc
Q 017431 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH-KGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSR 320 (371)
Q Consensus 242 ~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~-~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 320 (371)
+.++.+.+.+++++++|+++|++|....+..++++++ ++ |+++.+|....+...+++...+.++.++.|+.+..+...
T Consensus 239 ~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~ 317 (365)
T cd05279 239 DKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFGGWKSK 317 (365)
T ss_pred cchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEecCCCCCceeeCHHHHhcCCeEEEEeccCCchH
Confidence 2267777777775599999999997778999999999 96 999999875323345555555544677888876666566
Q ss_pred CcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEe
Q 017431 321 SQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 368 (371)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~ 368 (371)
+.+..++++++++.+++.++.+++|+++++++|++.+.+++..|++|+
T Consensus 318 ~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~~~ 365 (365)
T cd05279 318 DSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESIRTILT 365 (365)
T ss_pred hHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 789999999999998876678899999999999999988877788763
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall |
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-47 Score=359.07 Aligned_cols=334 Identities=23% Similarity=0.342 Sum_probs=263.2
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC---CCCCcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE---GLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~---~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
|||+++..++.+++++++|.|+|.++||+|||+++++|++|++.++|..+. ..+|.++|||++|+|+++|++ ++|+
T Consensus 1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~ 79 (355)
T cd08230 1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS 79 (355)
T ss_pred CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence 799999865434999999999999999999999999999999999887532 246889999999999999999 9999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||||++.+..+|+.|.+|+.+++++|...... ..|....+ |+|++|+.++++.++++|++
T Consensus 80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~-~~g~~~~~------------------G~~aey~~~~~~~~~~~P~~ 140 (355)
T cd08230 80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYT-ERGIKGLH------------------GFMREYFVDDPEYLVKVPPS 140 (355)
T ss_pred CCCEEEeccccCCCcChhhhCcCcccCCCccee-ccCcCCCC------------------ccceeEEEeccccEEECCCC
Confidence 999999999889999999999999999864321 11211122 49999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhh------hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcC---ChhhHHHHHh
Q 017431 159 APLDKVCLLGCGVPTGLGAVW------NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI---DPKKFDRAKN 229 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~------~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~---~~~~~~~~~~ 229 (371)
++ + ++++..++.+++.++. ...++++|++|||+|+|++|++++|+||++|+ +|+++++ +++|++++++
T Consensus 141 ~~-~-~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~ 217 (355)
T cd08230 141 LA-D-VGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEE 217 (355)
T ss_pred CC-c-ceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHH
Confidence 98 3 4444445555544432 22336789999999999999999999999999 7998887 6789999999
Q ss_pred cCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCccccc----chh-ee
Q 017431 230 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTR----PFQ-LV 304 (371)
Q Consensus 230 ~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~----~~~-~~ 304 (371)
+|++. +++.+ .++.+ . + ..+++|++|||+|++..+..++++++++ |+++.+|.......++++ ... +.
T Consensus 218 ~Ga~~-v~~~~--~~~~~-~-~-~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~ 290 (355)
T cd08230 218 LGATY-VNSSK--TPVAE-V-K-LVGEFDLIIEATGVPPLAFEALPALAPN-GVVILFGVPGGGREFEVDGGELNRDLVL 290 (355)
T ss_pred cCCEE-ecCCc--cchhh-h-h-hcCCCCEEEECcCCHHHHHHHHHHccCC-cEEEEEecCCCCCccccChhhhhhhHhh
Confidence 99986 45544 33332 1 1 1238999999999977899999999997 999999976432333443 122 33
Q ss_pred eceEEEeeecCCCcccCcHHHHHHHHHcCCC----CCCCceeeeeecccHHHHHHHHhCCCeeEEEEec
Q 017431 305 TGRVWKGTAFGGFKSRSQVPWLVDKYMKKEI----KVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 369 (371)
Q Consensus 305 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~ 369 (371)
+++++.|+.... +++++.+++++.++.+ .+.++++++|+++|+++|++.+.++. .|++|++
T Consensus 291 k~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~-~K~v~~~ 355 (355)
T cd08230 291 GNKALVGSVNAN---KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE-IKVVIEW 355 (355)
T ss_pred cCcEEEEecCCc---hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC-eEEEeeC
Confidence 588888875432 3578899999988762 35667899999999999999887654 5999875
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >PLN02178 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-47 Score=358.20 Aligned_cols=330 Identities=24% Similarity=0.340 Sum_probs=269.6
Q ss_pred EEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEe
Q 017431 5 AVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVI 84 (371)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd~V~ 84 (371)
++..+..+++++.+++.|+|.++||+|||.++++|++|++.+.|.++...+|.++|||++|+|+++|+++++|++||||+
T Consensus 10 ~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV~ 89 (375)
T PLN02178 10 WAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVG 89 (375)
T ss_pred EEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCCCCEEE
Confidence 33444445588899999999999999999999999999999988764445789999999999999999999999999998
Q ss_pred ecCCC-CCCCCccccCCCCcccccccCCCc----cceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCC
Q 017431 85 PCYQA-ECRECKFCKSGKTNLCGKVRGATG----AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 159 (371)
Q Consensus 85 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~ 159 (371)
+.+.. +|+.|.+|+.++++.|.+...... .|.. . .|+|++|+.++++.++++|+++
T Consensus 90 ~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~-~------------------~G~~aey~~v~~~~~~~lP~~l 150 (375)
T PLN02178 90 VGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTR-N------------------QGGYSDVIVVDHRFVLSIPDGL 150 (375)
T ss_pred EcCccCCCCCChhHhCcchhcCCCccccccccccCCCc-C------------------CCccccEEEEchHHeEECCCCC
Confidence 76655 699999999999999987542100 0111 1 2499999999999999999999
Q ss_pred CcchhhhccccchhhhhhhhhcCC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-hHHHHHhcCCcEEec
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRAKNFGVTEFVN 237 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~-~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~-~~~~~~~~g~~~vi~ 237 (371)
++++|+.+++...|+|+++..... .++|++|+|.|+|++|++++|+|+++|+ +|++++++++ +.++++++|++++++
T Consensus 151 s~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i~ 229 (375)
T PLN02178 151 PSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFLV 229 (375)
T ss_pred CHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEEc
Confidence 999999999999999998755443 3689999999999999999999999999 7888876654 478888999999988
Q ss_pred CCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecCC
Q 017431 238 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGG 316 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~ 316 (371)
+.+ . +.+.+.++ ++|++|||+|.+..+..++++++++ |+++.+|.... ..+++...+. +++++.|+....
T Consensus 230 ~~~--~---~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~vG~~~~--~~~~~~~~~~~~~~~i~g~~~~~ 300 (375)
T PLN02178 230 TTD--S---QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLPEK--PLDLPIFPLVLGRKMVGGSQIGG 300 (375)
T ss_pred CcC--H---HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCC-CEEEEEccCCC--CCccCHHHHHhCCeEEEEeCccC
Confidence 654 2 34445443 7999999999977789999999996 99999987532 2344444443 478888876543
Q ss_pred CcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 317 FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
.+++++++++++++++++. + ++|+|+|+++|++.+.+++.. |+|+++
T Consensus 301 ---~~~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 301 ---MKETQEMLEFCAKHKIVSD--I-ELIKMSDINSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred ---HHHHHHHHHHHHhCCCccc--E-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence 2578999999999998753 4 679999999999999998875 999986
|
|
| >TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-47 Score=355.02 Aligned_cols=333 Identities=29% Similarity=0.446 Sum_probs=279.6
Q ss_pred EEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCC-CCCCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 017431 5 AVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK-DPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHV 83 (371)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~-~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd~V 83 (371)
+++.+++.++++++.|.|++.++||+|||.++++|++|++.+.+. .+...+|.++|||++|+|+++|++++.+ +||+|
T Consensus 2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV 80 (349)
T TIGR03201 2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAV 80 (349)
T ss_pred ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEE
Confidence 467788877999999999999999999999999999999887443 3233578999999999999999999887 99999
Q ss_pred eecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCC------
Q 017431 84 IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP------ 157 (371)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~------ 157 (371)
++.+..+|+.|.+|+.+..+.|..... .|.. .+ |+|++|+.++.+.++++|+
T Consensus 81 ~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~-~~------------------G~~ae~~~v~~~~~~~ip~~~~~~~ 138 (349)
T TIGR03201 81 IVPAVIPCGECELCKTGRGTICRAQKM---PGND-MQ------------------GGFASHIVVPAKGLCVVDEARLAAA 138 (349)
T ss_pred EECCCCCCCCChhhhCcCcccCCCCCc---cCcC-CC------------------CcccceEEechHHeEECCccccccc
Confidence 999999999999999999999975432 2211 22 4999999999999999999
Q ss_pred CCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 158 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
++++++++.+++++.++|+++. ...+++|++|||+|+|++|++++|+|+++|+ +|+++++++++.++++++|++++++
T Consensus 139 ~~~~~~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~ 216 (349)
T TIGR03201 139 GLPLEHVSVVADAVTTPYQAAV-QAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLN 216 (349)
T ss_pred CCCHHHhhhhcchHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEec
Confidence 8999999999999999999874 5789999999999999999999999999999 7999999999999999999999888
Q ss_pred CCCCC-chHHHHHHhhcCC-Ccc----EEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEE
Q 017431 238 PKDHD-KPIQQVLVDLTDG-GVD----YSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWK 310 (371)
Q Consensus 238 ~~~~~-~~~~~~~~~~~~g-g~d----vvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~ 310 (371)
+.+.+ .++.+.+++.+++ ++| ++|||+|+..++..++++++++ |+++.+|..... .+++...+. ++.++.
T Consensus 217 ~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~~~~~~~ 293 (349)
T TIGR03201 217 PKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMAK--TEYRLSNLMAFHARAL 293 (349)
T ss_pred CccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC-CeEEEECcCCCC--cccCHHHHhhcccEEE
Confidence 76522 2566778888887 886 8999999988888999999997 999999986432 233333333 366777
Q ss_pred eeecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 311 GTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 311 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
|++.. ...+++.++++++++++++.++++ +|+|+|+++||+.+.+++.. |+++++
T Consensus 294 g~~~~---~~~~~~~~~~~i~~g~i~~~~~i~-~~~l~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 294 GNWGC---PPDRYPAALDLVLDGKIQLGPFVE-RRPLDQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred EEecC---CHHHHHHHHHHHHcCCCCcccceE-EecHHHHHHHHHHHHcCCccceEEecC
Confidence 76532 235789999999999998877664 79999999999999988876 888753
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. |
| >cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-46 Score=353.31 Aligned_cols=349 Identities=28% Similarity=0.432 Sum_probs=290.1
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCC-----
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE----- 76 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~----- 76 (371)
.||+++.++++++++++.+.|.|+++||+|||.++++|++|++...|..+...+|.++|||++|+|+++|++++.
T Consensus 1 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~ 80 (361)
T cd08231 1 ARAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGE 80 (361)
T ss_pred CeEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCC
Confidence 479999999977999999999999999999999999999999999887653457889999999999999999986
Q ss_pred -CCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEeccc-ceEe
Q 017431 77 -VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV-SVAK 154 (371)
Q Consensus 77 -~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~-~v~~ 154 (371)
|++||+|++.+..+|+.|.+|+.+..+.|..... +|.....| + ....|+|++|+.++++ .+++
T Consensus 81 ~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~---~~~~~~~~-------~-----~~~~g~~a~~~~v~~~~~~~~ 145 (361)
T cd08231 81 PLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKK---YGHEASCD-------D-----PHLSGGYAEHIYLPPGTAIVR 145 (361)
T ss_pred ccCCCCEEEEcccCCCCCChhHhCcCccccccchh---cccccccc-------C-----CCCCcccceEEEecCCCceEE
Confidence 9999999999999999999999999999986543 22110000 0 0012599999999996 7999
Q ss_pred cCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE
Q 017431 155 IDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 234 (371)
Q Consensus 155 lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~ 234 (371)
+|+++++++|+.++++++|||+++.+....++|++|||+|+|++|++++++|+.+|+++|+++++++++.++++++|++.
T Consensus 146 lP~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~ 225 (361)
T cd08231 146 VPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADA 225 (361)
T ss_pred CCCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCe
Confidence 99999999999998999999999977777779999999999999999999999999978999999999999999999999
Q ss_pred EecCCCCC-chHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEe
Q 017431 235 FVNPKDHD-KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKG 311 (371)
Q Consensus 235 vi~~~~~~-~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g 311 (371)
++++++.. ..+...+.+.+++ ++|++|||+|+...+..++++++++ |+++.+|........++++..+ .++.++.+
T Consensus 226 vi~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 304 (361)
T cd08231 226 TIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAGTVPLDPERIVRKNLTIIG 304 (361)
T ss_pred EEcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CEEEEEcCCCCCCccccCHHHHhhcccEEEE
Confidence 88876521 1233567788877 9999999999877789999999996 9999998754323334444332 34778877
Q ss_pred eecCCCcccCcHHHHHHHHHcC--CCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEec
Q 017431 312 TAFGGFKSRSQVPWLVDKYMKK--EIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 369 (371)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~ 369 (371)
+... ..++++++++++.++ .+++.++++++|+++++++|++.+++++..|+||.+
T Consensus 305 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 361 (361)
T cd08231 305 VHNY---DPSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTALKVVIDP 361 (361)
T ss_pred cccC---CchhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCceEEEeCC
Confidence 7643 235788899999887 666777789999999999999999888767999863
|
This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino |
| >TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-46 Score=347.81 Aligned_cols=321 Identities=22% Similarity=0.312 Sum_probs=268.8
Q ss_pred EEeecCCC----CeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 5 AVAWEPNK----PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 5 ~~~~~~~~----~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
+.+.+++. +++++++|.|.|.++||+|||.++++|++|++.+.|..+....|.++|||++|+|+++|++++++++|
T Consensus 2 ~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 81 (329)
T TIGR02822 2 WEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVG 81 (329)
T ss_pred eeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCCC
Confidence 55666663 48999999999999999999999999999999999876544457899999999999999999999999
Q ss_pred CEEeecCC-CCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCC
Q 017431 81 DHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 159 (371)
Q Consensus 81 d~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~ 159 (371)
|+|++.+. .+|+.|.+|..+.++.|..... .|.. .+ |+|++|+.++.+.++++|+++
T Consensus 82 d~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~lP~~~ 139 (329)
T TIGR02822 82 DRVGIAWLRRTCGVCRYCRRGAENLCPASRY---TGWD-TD------------------GGYAEYTTVPAAFAYRLPTGY 139 (329)
T ss_pred CEEEEcCccCcCCCChHHhCcCcccCCCccc---CCcc-cC------------------CcceeEEEeccccEEECCCCC
Confidence 99987654 4699999999999999986542 2321 23 499999999999999999999
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCC
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 239 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~ 239 (371)
++++++.+++++.|||+++. ..++++|++|||+|+|++|++++|+|+.+|+ +|++++++++|.++++++|++++++..
T Consensus 140 ~~~~aa~l~~~~~ta~~~~~-~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~ 217 (329)
T TIGR02822 140 DDVELAPLLCAGIIGYRALL-RASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAY 217 (329)
T ss_pred CHHHhHHHhccchHHHHHHH-hcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceecccc
Confidence 99999999999999999884 5789999999999999999999999999999 799999999999999999999988753
Q ss_pred CCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeeecCCCc
Q 017431 240 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGFK 318 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~ 318 (371)
+ .. .+++|+++++.+....+..++++++++ |+++.+|..... ...++...+ .+++++.++...
T Consensus 218 ~--~~---------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~~--- 281 (329)
T TIGR02822 218 D--TP---------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAVAGIHLTD-TPPLNYQRHLFYERQIRSVTSN--- 281 (329)
T ss_pred c--cC---------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEEEeccCcc-CCCCCHHHHhhCCcEEEEeecC---
Confidence 3 10 126899999888878899999999996 999999974322 223333333 347788776543
Q ss_pred ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 319 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
.++++.++++++++++++ +++++|+|+|+++|++.+.+++.. |+||.
T Consensus 282 ~~~~~~~~~~l~~~g~i~---~i~~~~~l~~~~~A~~~~~~~~~~Gkvvl~ 329 (329)
T TIGR02822 282 TRADAREFLELAAQHGVR---VTTHTYPLSEADRALRDLKAGRFDGAAVLV 329 (329)
T ss_pred CHHHHHHHHHHHHhCCCe---eEEEEEeHHHHHHHHHHHHcCCCceEEEeC
Confidence 235788899999999875 367999999999999999998887 98873
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized. |
| >cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-45 Score=347.61 Aligned_cols=335 Identities=28% Similarity=0.475 Sum_probs=284.6
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCC---C--------CCCCCcccccceeEEEEEe
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD---P--------EGLFPCILGHEAAGIVESV 70 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~---~--------~~~~p~v~G~e~~G~V~~~ 70 (371)
|||+++.+++. ++++++|.|+|.++||+||+.++++|++|++.+.+.. + ...+|.++|||++|+|+++
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v 79 (351)
T cd08233 1 MKAARYHGRKD-IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV 79 (351)
T ss_pred CceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence 89999998876 9999999999999999999999999999988665321 1 1136889999999999999
Q ss_pred CCCCCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEeccc
Q 017431 71 GEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV 150 (371)
Q Consensus 71 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~ 150 (371)
|++++.+++||+|++.+..+|++|.+|+.+..+.|..... .|.... .|+|++|+.++.+
T Consensus 80 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~------------------~g~~a~~~~~~~~ 138 (351)
T cd08233 80 GSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGF---IGLGGG------------------GGGFAEYVVVPAY 138 (351)
T ss_pred CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCce---eccCCC------------------CCceeeEEEechH
Confidence 9999999999999999999999999999999999975431 111101 2499999999999
Q ss_pred ceEecCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc
Q 017431 151 SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF 230 (371)
Q Consensus 151 ~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~ 230 (371)
.++++|+++++++++.+ .++.+||+++ ...++++|++|||+|+|.+|++++|+|+.+|+++|+++++++++.++++++
T Consensus 139 ~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ 216 (351)
T cd08233 139 HVHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEEL 216 (351)
T ss_pred HeEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 99999999999998776 5788999988 788899999999999999999999999999997899999999999999999
Q ss_pred CCcEEecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceE
Q 017431 231 GVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRV 308 (371)
Q Consensus 231 g~~~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~ 308 (371)
|++.++++++ .++.+.+++.+++ ++|+++|++|....++.++++++++ |+++.+|... ...+++...+. ++++
T Consensus 217 ga~~~i~~~~--~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~ 291 (351)
T cd08233 217 GATIVLDPTE--VDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWE--KPISFNPNDLVLKEKT 291 (351)
T ss_pred CCCEEECCCc--cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCC--CCCccCHHHHHhhCcE
Confidence 9999998877 6688888888887 7999999999877899999999996 9999999754 23444444433 4788
Q ss_pred EEeeecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccH-HHHHHHHhCCCe--eEEEEe
Q 017431 309 WKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEI-NEAFRYMHGGDC--LRCVLK 368 (371)
Q Consensus 309 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~A~~~~~~~~~--~kvvl~ 368 (371)
+.++... ..+++++++++++++++++.+.++++|+++|+ ++|++.+.+++. .|+||.
T Consensus 292 i~g~~~~---~~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~~ 351 (351)
T cd08233 292 LTGSICY---TREDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILVS 351 (351)
T ss_pred EEEEecc---CcchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEeC
Confidence 8887543 23689999999999999877788899999996 799999988775 498873
|
(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. |
| >PLN02514 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-46 Score=349.08 Aligned_cols=339 Identities=22% Similarity=0.299 Sum_probs=277.2
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 81 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd 81 (371)
+++++++.+++++++++++.|+|.++||+|||.++++|++|++.+.|.++...+|.++|||++|+|+++|+++++|++||
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~~v~~~~~Gd 89 (357)
T PLN02514 10 TTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVGD 89 (357)
T ss_pred EEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECCCcccccCCC
Confidence 78999999999999999999999999999999999999999999988765556789999999999999999999999999
Q ss_pred EEeecCCC-CCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 82 HVIPCYQA-ECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 82 ~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
+|++.+.. .|+.|.+|..+..+.|.........++ ..| ....|+|++|+.++.+.++++|++++
T Consensus 90 ~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~--~~g-------------~~~~G~~aey~~v~~~~~~~iP~~~~ 154 (357)
T PLN02514 90 IVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVY--TDG-------------KPTQGGFASAMVVDQKFVVKIPEGMA 154 (357)
T ss_pred EEEEcCccccCCCChhHhCCCcccCCCccccccccc--cCC-------------ccCCCccccEEEEchHHeEECCCCCC
Confidence 99866544 699999999999999986521100000 000 01125999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCcEEecCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTEFVNPK 239 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~g~~~vi~~~ 239 (371)
+++|+.+++++.|||+++......++|++|+|+|+|++|++++|+|+++|+ +++++++++++.+ .++++|++.++++.
T Consensus 155 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~i~~~ 233 (357)
T PLN02514 155 PEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHLGADDYLVSS 233 (357)
T ss_pred HHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhcCCcEEecCC
Confidence 999999999999999998766667899999999999999999999999999 6777777776654 44679998877654
Q ss_pred CCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeeecCCCc
Q 017431 240 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGFK 318 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~ 318 (371)
+ . +.+.+.+. ++|++|||+|....++.++++++++ |+++.+|.... ..+++...+ .+++++.|+....
T Consensus 234 ~--~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~i~g~~~~~-- 302 (357)
T PLN02514 234 D--A---AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGVINT--PLQFVTPMLMLGRKVITGSFIGS-- 302 (357)
T ss_pred C--h---HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccC-CEEEEECCCCC--CCcccHHHHhhCCcEEEEEecCC--
Confidence 4 2 23444443 7999999999877899999999996 99999997632 234444433 3488888886643
Q ss_pred ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecCC
Q 017431 319 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQD 371 (371)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~d 371 (371)
..+++++++++++++++ +++ ++|+|+|+++|++.+.+++.. |+++.+++
T Consensus 303 -~~~~~~~~~~~~~g~l~--~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~~ 352 (357)
T PLN02514 303 -MKETEEMLEFCKEKGLT--SMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVAG 352 (357)
T ss_pred -HHHHHHHHHHHHhCCCc--CcE-EEEcHHHHHHHHHHHHcCCCceeEEEEccc
Confidence 24789999999999864 445 689999999999999998876 99998863
|
|
| >KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-46 Score=316.39 Aligned_cols=312 Identities=25% Similarity=0.312 Sum_probs=267.1
Q ss_pred cceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 017431 2 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 79 (371)
Q Consensus 2 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~ 79 (371)
.|.+++++.|.+ +++++.|.|+|+++|++||-+++|+|..|....+|.+...++|.+||.|.+|+|+++|+.++++++
T Consensus 9 ~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gvtdrkv 88 (336)
T KOG1197|consen 9 LKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGVTDRKV 88 (336)
T ss_pred heEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCcccccc
Confidence 467888888866 999999999999999999999999999999999999977789999999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCC
Q 017431 80 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 159 (371)
Q Consensus 80 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~ 159 (371)
||||+... + +|.|++++.+|...++++|+.+
T Consensus 89 GDrVayl~-------------------------------~------------------~g~yaee~~vP~~kv~~vpe~i 119 (336)
T KOG1197|consen 89 GDRVAYLN-------------------------------P------------------FGAYAEEVTVPSVKVFKVPEAI 119 (336)
T ss_pred ccEEEEec-------------------------------c------------------chhhheeccccceeeccCCccc
Confidence 99997331 1 2499999999999999999999
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
++.+||++.+.++|||.-+++...+++|++||++.| |++|++++|++++.|+ .++++.+.++|.+.+++.|+.+.|++
T Consensus 120 ~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~h~I~y 198 (336)
T KOG1197|consen 120 TLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAEHPIDY 198 (336)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCcceeec
Confidence 999999999999999999999999999999999955 9999999999999999 89999999999999999999999999
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEe-eecC
Q 017431 239 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKG-TAFG 315 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g-~~~~ 315 (371)
+. +++.+.+.+.|++ |+|+++|++|. +++..++.+|++. |.+|.+|... +...+++...+. +.+++.. +.++
T Consensus 199 ~~--eD~v~~V~kiTngKGVd~vyDsvG~-dt~~~sl~~Lk~~-G~mVSfG~as-gl~~p~~l~~ls~k~l~lvrpsl~g 273 (336)
T KOG1197|consen 199 ST--EDYVDEVKKITNGKGVDAVYDSVGK-DTFAKSLAALKPM-GKMVSFGNAS-GLIDPIPLNQLSPKALQLVRPSLLG 273 (336)
T ss_pred cc--hhHHHHHHhccCCCCceeeeccccc-hhhHHHHHHhccC-ceEEEecccc-CCCCCeehhhcChhhhhhccHhhhc
Confidence 88 8999999999999 99999999999 7799999999996 9999999853 222222222221 1333322 2222
Q ss_pred CCcccCc----HHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecC
Q 017431 316 GFKSRSQ----VPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 370 (371)
Q Consensus 316 ~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~ 370 (371)
....+.+ ..+++.++.++.++.+ |.++|||+++.+|.++++++... |+++...
T Consensus 274 Yi~g~~el~~~v~rl~alvnsg~lk~~--I~~~ypls~vadA~~diesrktvGkvlLlp~ 331 (336)
T KOG1197|consen 274 YIDGEVELVSYVARLFALVNSGHLKIH--IDHVYPLSKVADAHADIESRKTVGKVLLLPG 331 (336)
T ss_pred ccCCHHHHHHHHHHHHHHhhcCcccee--eeeecchHHHHHHHHHHHhhhccceEEEeCC
Confidence 2222223 3457777788887755 89999999999999999998887 9998764
|
|
| >cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-45 Score=343.50 Aligned_cols=361 Identities=36% Similarity=0.654 Sum_probs=291.5
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
+|||+++.++++++++++.+.|++.+++|+|||.++++|++|++...|.++ ..+|.++|||++|+|+++|++++.+++|
T Consensus 2 ~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~G 80 (365)
T cd08278 2 KTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLKPG 80 (365)
T ss_pred ccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCC
Confidence 699999999887899999999999999999999999999999999988765 3468899999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccc-cccCCcce-eeccCCcceeeeEEecccceEecCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSR-FSINGKPI-YHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~-~~~~~~~~-~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
|+|++.+. .|+.|..|+.+..+.|.........|.. ++|-.- ...+|.+. .++...|+|++|+.++.+.++++|++
T Consensus 81 d~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~ 158 (365)
T cd08278 81 DHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRR-PDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKD 158 (365)
T ss_pred CEEEEccc-CCCCChHHhCCCcccccCcccccccccc-cCCcccccccCCcccccccccccceeeEEEecchhEEECCCC
Confidence 99998775 8999999999999999865432222211 111000 00000000 11234579999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
+++++++.++++++||+.++.....++++++|||+|+|++|++++|+|+++|+++++++++++++.++++++|++.++++
T Consensus 159 ~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~~ 238 (365)
T cd08278 159 VPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINP 238 (365)
T ss_pred CCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEecC
Confidence 99999999999999999998888899999999999889999999999999999779999999999999999999999887
Q ss_pred CCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeeecCCC
Q 017431 239 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGF 317 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~ 317 (371)
.+ .++.+.+.+.+++++|+++||+|++..+..++++++++ |+++.+|.........++...+ .++.++.++.....
T Consensus 239 ~~--~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (365)
T cd08278 239 KE--EDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGDS 315 (365)
T ss_pred CC--cCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCCc
Confidence 66 56777777777339999999999877799999999996 9999998753222334444444 44777777665433
Q ss_pred cccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEe
Q 017431 318 KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 368 (371)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~ 368 (371)
...+.++.+++++.++.+++.+. .+.|+++++++|++.+.+++..|++|+
T Consensus 316 ~~~~~~~~~~~~l~~g~l~~~~~-~~~~~l~~~~~a~~~~~~~~~~k~~~~ 365 (365)
T cd08278 316 VPQEFIPRLIELYRQGKFPFDKL-VTFYPFEDINQAIADSESGKVIKPVLR 365 (365)
T ss_pred ChHHHHHHHHHHHHcCCCChHHh-eEEecHHHHHHHHHHHHCCCceEEEEC
Confidence 23356788899999998854333 368999999999999998877798875
|
Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu |
| >cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-44 Score=339.87 Aligned_cols=342 Identities=24% Similarity=0.343 Sum_probs=282.8
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 81 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd 81 (371)
|||+++.+++. +++++.|.|.+.++||+|||.++++|++|++.+.+.......|.++|||++|+|+++|++++++++||
T Consensus 1 mka~~~~~~~~-~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd 79 (351)
T cd08285 1 MKAFAMLGIGK-VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGD 79 (351)
T ss_pred CceEEEccCCc-cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCC
Confidence 89999999986 89999999999999999999999999999998887765446688999999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEeccc--ceEecCCCC
Q 017431 82 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQA 159 (371)
Q Consensus 82 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~v~~lP~~~ 159 (371)
+|++.+..+|+.|..|..+..+.|.........+ ....|+|++|+.++.+ .++++|+++
T Consensus 80 ~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~-------------------~~~~g~~~~y~~v~~~~~~~~~lP~~~ 140 (351)
T cd08285 80 RVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFS-------------------NFKDGVFAEYFHVNDADANLAPLPDGL 140 (351)
T ss_pred EEEEcCcCCCCCCHHHHCcCcccCcCCCCCcccc-------------------CCCCcceeEEEEcchhhCceEECCCCC
Confidence 9999888899999999999999997542100000 0112499999999974 899999999
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCC
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 239 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~ 239 (371)
++++++.++..+.|||+++ +..++++|++|||+|+|++|++++|+|+.+|+..|+++++++++.++++++|+++++++.
T Consensus 141 ~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~ 219 (351)
T cd08285 141 TDEQAVMLPDMMSTGFHGA-ELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYK 219 (351)
T ss_pred CHHHhhhhccchhhHHHHH-HccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCC
Confidence 9999999999999999985 778899999999998899999999999999997799999999999999999999999877
Q ss_pred CCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccc--hhe-eeceEEEeeecC
Q 017431 240 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP--FQL-VTGRVWKGTAFG 315 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~--~~~-~~~~~~~g~~~~ 315 (371)
+ .++.+.+.+.+.+ ++|+++|++|++..+..++++++++ |+++.+|........+++. +.. ....++.+....
T Consensus 220 ~--~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 296 (351)
T cd08285 220 N--GDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCP 296 (351)
T ss_pred C--CCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCCceeecChhhhhhhccccEEEEeecC
Confidence 6 5677777777776 8999999999877899999999996 9999998754322233332 211 224445443221
Q ss_pred CCcccCcHHHHHHHHHcCCCCCCC-ceeeeeecccHHHHHHHHhCCCe--eEEEEec
Q 017431 316 GFKSRSQVPWLVDKYMKKEIKVDE-YVTHNMTLGEINEAFRYMHGGDC--LRCVLKM 369 (371)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~A~~~~~~~~~--~kvvl~~ 369 (371)
...+++++++++++++++++.. .+.++|+++++++|++.+++++. .|++|++
T Consensus 297 --~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 297 --GGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred --CccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 1236789999999999988743 34456999999999999988763 5999875
|
This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-44 Score=337.04 Aligned_cols=360 Identities=44% Similarity=0.788 Sum_probs=293.3
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 81 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd 81 (371)
|||+++.+++.+++++++|.|.+.+++|+|++.++++|+.|+..+.|.++ ..+|.++|+|++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 79 (363)
T cd08279 1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKPGD 79 (363)
T ss_pred CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCCCC
Confidence 89999999988899999999999999999999999999999998888765 34678899999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCc
Q 017431 82 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 161 (371)
Q Consensus 82 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~ 161 (371)
+|+..+..+|++|++|+.++.++|+......+ | ...++..++--.|...+...+.|+|++|+.++.+.++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~ 157 (363)
T cd08279 80 HVVLSWIPACGTCRYCSRGQPNLCDLGAGILG-G-QLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPL 157 (363)
T ss_pred EEEECCCCCCCCChhhcCCCcccCcccccccc-c-ccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCCh
Confidence 99999999999999999999999986532100 0 000000000000111111123469999999999999999999999
Q ss_pred chhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCC
Q 017431 162 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241 (371)
Q Consensus 162 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~ 241 (371)
++++.+++++.+||.+++...++.++++|||+|+|.+|++++++|+.+|+++|+++++++++.++++++|++++++.+.
T Consensus 158 ~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~- 236 (363)
T cd08279 158 DRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASE- 236 (363)
T ss_pred HHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCC-
Confidence 9999999999999999888899999999999988999999999999999955999999999999999999988888766
Q ss_pred CchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecCCCcc
Q 017431 242 DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKS 319 (371)
Q Consensus 242 ~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~ 319 (371)
.++...+.+.+.+ ++|+++|++++...+..++++++++ |+++.+|.........++...+. .+..+.++.++....
T Consensus 237 -~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (363)
T cd08279 237 -DDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANP 314 (363)
T ss_pred -ccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCc
Confidence 5677778787766 8999999999767789999999996 99999986542233444444444 355666665544444
Q ss_pred cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEE
Q 017431 320 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVL 367 (371)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl 367 (371)
.+.++.+++++.++.+++.+.+.++|+++++++|++.+.+++..|.||
T Consensus 315 ~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 315 RRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred HHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 567889999999999886656788999999999999999888776655
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me |
| >PRK10083 putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-43 Score=330.51 Aligned_cols=334 Identities=22% Similarity=0.391 Sum_probs=276.9
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 81 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd 81 (371)
|||+++.+++. ++++++|.|+|.+++|+||+.++++|++|++.+.|..+..++|.++|||++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 79 (339)
T PRK10083 1 MKSIVIEKPNS-LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGE 79 (339)
T ss_pred CeEEEEecCCe-eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCC
Confidence 79999999875 99999999999999999999999999999999888765556789999999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCc
Q 017431 82 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 161 (371)
Q Consensus 82 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~ 161 (371)
+|++.+..+|+.|.+|+.++++.|.+... .++. ++ |+|++|+.++.+.++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~~~~~~~~~ip~~~~~ 137 (339)
T PRK10083 80 RVAVDPVISCGHCYPCSIGKPNVCTSLVV---LGVH-RD------------------GGFSEYAVVPAKNAHRIPDAIAD 137 (339)
T ss_pred EEEEccccCCCCCccccCcCcccCCCCce---EEEc-cC------------------CcceeeEEechHHeEECcCCCCH
Confidence 99999999999999999999999975432 1211 12 49999999999999999999998
Q ss_pred chhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 162 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKA-AGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 162 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~-~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
++++ +..++.++|+ +....++++|++|||+|+|++|++++|+|+. +|+..++++++++++.++++++|+++++++++
T Consensus 138 ~~a~-~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~ 215 (339)
T PRK10083 138 QYAV-MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ 215 (339)
T ss_pred HHHh-hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc
Confidence 8876 4567788885 5577899999999999999999999999996 69977888999999999999999999998765
Q ss_pred CCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecCCCc
Q 017431 241 HDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFK 318 (371)
Q Consensus 241 ~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~ 318 (371)
..+.+.+.. .+ ++|++||++|++..+..++++++++ |+++.+|.... ...+....+. +++++.+...
T Consensus 216 --~~~~~~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~---- 284 (339)
T PRK10083 216 --EPLGEALEE--KGIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFSSE--PSEIVQQGITGKELSIFSSRL---- 284 (339)
T ss_pred --ccHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC--CceecHHHHhhcceEEEEEec----
Confidence 455555533 23 6789999999877899999999996 99999987532 2222222222 3556655543
Q ss_pred ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCC-e-eEEEEecCC
Q 017431 319 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD-C-LRCVLKMQD 371 (371)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~-~-~kvvl~~~d 371 (371)
..+.++.+++++.++++++.++++++|+++++++|++.+.++. . .|+++.+.+
T Consensus 285 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~ 339 (339)
T PRK10083 285 NANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE 339 (339)
T ss_pred ChhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 2357889999999999887656789999999999999998643 3 499998864
|
|
| >cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-44 Score=335.84 Aligned_cols=319 Identities=17% Similarity=0.221 Sum_probs=248.3
Q ss_pred ceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC----CCCCcccccceeEEEEEeCCCCCCCC
Q 017431 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE----GLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 3 ~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~----~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
+++++.++++ +++++.|.|+ .++||+|||+++|||++|++.+.|.... ..+|.++|||++|+|+++|.+ .|+
T Consensus 4 ~~~~~~~~~~-~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~~~ 79 (341)
T cd08237 4 QVYRLVRPKF-FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--TYK 79 (341)
T ss_pred cceEEeccce-EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--ccC
Confidence 6788889887 9999999995 9999999999999999999999987532 257999999999999998874 799
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||||++.+..+|+ |+.|. ..+.|.+... .|.. .+ |+|+||+.+|++.++++|++
T Consensus 80 vGdrV~~~~~~~~~-~~~~~--~~~~c~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~vP~~ 134 (341)
T cd08237 80 VGTKVVMVPNTPVE-KDEII--PENYLPSSRF---RSSG-YD------------------GFMQDYVFLPPDRLVKLPDN 134 (341)
T ss_pred CCCEEEECCCCCch-hcccc--hhccCCCcce---eEec-CC------------------CceEEEEEEchHHeEECCCC
Confidence 99999998887777 44553 4466754321 1211 23 39999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhh--cCCCCCCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEEcCChhhHHHHHhcCCcEE
Q 017431 159 APLDKVCLLGCGVPTGLGAVWN--TAKVEPGSIVAVFGLGTVGLAVAEGAKA-AGASRVIGIDIDPKKFDRAKNFGVTEF 235 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~--~~~~~~g~~VlI~Gag~vG~~ai~la~~-~g~~~v~~v~~~~~~~~~~~~~g~~~v 235 (371)
+++++||.+ .+++++|+++.. ...+++|++|||+|+|++|++++|+++. +|+.+|++++++++|++++++.+....
T Consensus 135 l~~~~aa~~-~~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~ 213 (341)
T cd08237 135 VDPEVAAFT-ELVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYL 213 (341)
T ss_pred CChHHhhhh-chHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceee
Confidence 999887755 488889988754 3456889999999999999999999986 666589999999999999987665432
Q ss_pred ecCCCCCchHHHHHHhhcCC-CccEEEEccC---CHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEE
Q 017431 236 VNPKDHDKPIQQVLVDLTDG-GVDYSFECIG---NVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWK 310 (371)
Q Consensus 236 i~~~~~~~~~~~~~~~~~~g-g~dvvid~~g---~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~ 310 (371)
++ + ...+ ++|++||++| .+.+++.++++++++ |+++.+|.... ..+++...+ .+++++.
T Consensus 214 ~~------~-------~~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~k~~~i~ 277 (341)
T cd08237 214 ID------D-------IPEDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTIGLMGVSEY--PVPINTRMVLEKGLTLV 277 (341)
T ss_pred hh------h-------hhhccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEEEEEeecCC--CcccCHHHHhhCceEEE
Confidence 21 1 1123 7999999999 456799999999997 99999997432 234444433 3588888
Q ss_pred eeecCCCcccCcHHHHHHHHHcC---CCCCCCceeeeeecc---cHHHHHHHHhCCCeeEEEEecC
Q 017431 311 GTAFGGFKSRSQVPWLVDKYMKK---EIKVDEYVTHNMTLG---EINEAFRYMHGGDCLRCVLKMQ 370 (371)
Q Consensus 311 g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~~~---~~~~A~~~~~~~~~~kvvl~~~ 370 (371)
|+... ..++++.+++++.++ ..++.++++++|+++ ++++|++...++...|+||.++
T Consensus 278 g~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~~~gKvvi~~~ 340 (341)
T cd08237 278 GSSRS---TREDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTNSWGKTVMEWE 340 (341)
T ss_pred Eeccc---CHHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhcCcceEEEEee
Confidence 87543 235789999999998 335778889999985 5566666555543459999875
|
NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase ( |
| >cd05278 FDH_like Formaldehyde dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-43 Score=329.80 Aligned_cols=340 Identities=29% Similarity=0.458 Sum_probs=284.2
Q ss_pred cceEEeecCCCCeEEEEeeCCCC-CCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
||++++.+++. +++.+.|.|.| .+++|+||+.++++|++|++.+.|.++..++|.++|+|++|+|+++|++++.+++|
T Consensus 1 ~ka~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (347)
T cd05278 1 MKALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPG 79 (347)
T ss_pred CceEEEecCCc-eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCC
Confidence 79999998877 99999999999 99999999999999999999998887656678999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEeccc--ceEecCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ 158 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~v~~lP~~ 158 (371)
|+|++.+..+|+.|.+|+.+....|.......+.+. ...|+|++|++++.+ .++++|++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~g~~~~~~~v~~~~~~~~~lP~~ 140 (347)
T cd05278 80 DRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGN-------------------RIDGGQAEYVRVPYADMNLAKIPDG 140 (347)
T ss_pred CEEEecCCCCCCCChhHhCcCcccCcCCCccccccc-------------------CCCCeeeEEEEecchhCeEEECCCC
Confidence 999999999999999999999999976542211111 112499999999987 99999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
+++++|+.++++++|||+++ ...+++++++|||.|+|.+|++++|+|+.+|+.+++++++++++.++++++|++.++++
T Consensus 141 ~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~ 219 (347)
T cd05278 141 LPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINP 219 (347)
T ss_pred CCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcC
Confidence 99999999999999999987 77889999999998889999999999999997578888888889999999999999888
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCC
Q 017431 239 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF 317 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 317 (371)
++ .++.+.+.+.+++ ++|++||++++...+..++++|+++ |+++.+|..............+.++.++.+.....
T Consensus 220 ~~--~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 295 (347)
T cd05278 220 KN--GDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPV- 295 (347)
T ss_pred Cc--chHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEEEEEcCCCCCcccCccchhhhceeEEEeeccCc-
Confidence 76 5677778888776 8999999999866799999999996 99999986432211112222223466666544322
Q ss_pred cccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCe-e-EEEEe
Q 017431 318 KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDC-L-RCVLK 368 (371)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~-~-kvvl~ 368 (371)
.+.++.+++++.++.+++.+.+...|+++++++|++.+.+++. . |++++
T Consensus 296 --~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~ 346 (347)
T cd05278 296 --RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIR 346 (347)
T ss_pred --hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEec
Confidence 3578889999999988765556788999999999999987776 4 88875
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall |
| >cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-43 Score=339.26 Aligned_cols=331 Identities=19% Similarity=0.248 Sum_probs=263.0
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccc-cCCCCC------CCCCcccccceeEEEEEeCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTW-SGKDPE------GLFPCILGHEAAGIVESVGEG 73 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~-~g~~~~------~~~p~v~G~e~~G~V~~~G~~ 73 (371)
+||++++.+++. ++++++|.|+|.++||+|||.++|+|++|++.+ .|.... ..+|.++|||++|+|+++|++
T Consensus 2 ~~~a~~~~~~~~-l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~ 80 (410)
T cd08238 2 KTKAWRMYGKGD-LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGKK 80 (410)
T ss_pred CcEEEEEEcCCc-eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCCC
Confidence 489999999986 999999999999999999999999999999976 454211 146889999999999999999
Q ss_pred CC-CCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEeccc--
Q 017431 74 VT-EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV-- 150 (371)
Q Consensus 74 v~-~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~-- 150 (371)
++ .|++||||++.+...|+.|..|.. +|.. .+| +|++|+.++.+
T Consensus 81 v~~~~~vGdrV~~~~~~~c~~~~~c~~--------------~g~~-~~G------------------~~aey~~v~~~~~ 127 (410)
T cd08238 81 WQGKYKPGQRFVIQPALILPDGPSCPG--------------YSYT-YPG------------------GLATYHIIPNEVM 127 (410)
T ss_pred ccCCCCCCCEEEEcCCcCCCCCCCCCC--------------cccc-CCC------------------cceEEEEecHHhc
Confidence 98 599999999999888998887731 1111 234 99999999987
Q ss_pred --ceEecCCCCCcchhhhc-cccc-hhhhhhh--------hhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcC--CCeEE
Q 017431 151 --SVAKIDPQAPLDKVCLL-GCGV-PTGLGAV--------WNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAG--ASRVI 215 (371)
Q Consensus 151 --~v~~lP~~~~~~~aa~~-~~~~-~ta~~~l--------~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g--~~~v~ 215 (371)
.++++|+++++++|+.+ +.+. .+++.++ .+..++++|++|+|+|+ |++|++++|+|+++| +.+|+
T Consensus 128 ~~~~~~lP~~l~~~~aal~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi 207 (410)
T cd08238 128 EQDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLV 207 (410)
T ss_pred cCCeEECCCCCCHHHHhhcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEE
Confidence 68999999999998865 3111 1233332 24578899999999975 999999999999985 45799
Q ss_pred EEcCChhhHHHHHhc--------CCc-EEecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEE
Q 017431 216 GIDIDPKKFDRAKNF--------GVT-EFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSV 285 (371)
Q Consensus 216 ~v~~~~~~~~~~~~~--------g~~-~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv 285 (371)
+++++++|+++++++ |++ .++++.+ ..++.+.+++++++ ++|++||++|.+..+..++++++++ |+++
T Consensus 208 ~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~-~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~-G~~v 285 (410)
T cd08238 208 VTDVNDERLARAQRLFPPEAASRGIELLYVNPAT-IDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPD-GCLN 285 (410)
T ss_pred EEcCCHHHHHHHHHhccccccccCceEEEECCCc-cccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccC-CeEE
Confidence 999999999999997 665 4666543 14577778888887 9999999999888899999999996 8887
Q ss_pred EEccCCC-CCcccccchhee-eceEEEeeecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee
Q 017431 286 IVGVAAS-GQEISTRPFQLV-TGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL 363 (371)
Q Consensus 286 ~~g~~~~-~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~ 363 (371)
.++.... ....+++...+. +++++.|+... ...++++++++++++++++.++++++|+|+++++|++.+..+...
T Consensus 286 ~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~---~~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~g 362 (410)
T cd08238 286 FFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGG---NTDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLPGIPGG 362 (410)
T ss_pred EEEccCCCCccccccHHHhhhcCcEEEEeCCC---CHHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhhccCCc
Confidence 7644221 112344444443 48888887643 235789999999999999888999999999999999999943334
Q ss_pred EEEEecC
Q 017431 364 RCVLKMQ 370 (371)
Q Consensus 364 kvvl~~~ 370 (371)
|+||.++
T Consensus 363 Kvvl~~~ 369 (410)
T cd08238 363 KKLIYTQ 369 (410)
T ss_pred eEEEECC
Confidence 9999874
|
L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found |
| >cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-43 Score=328.48 Aligned_cols=330 Identities=27% Similarity=0.454 Sum_probs=278.9
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 81 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd 81 (371)
|||+++.+++.+++++++|.|++.+++|+|++.++++|++|+..+.|..+...+|.++|||++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd 80 (333)
T cd08296 1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD 80 (333)
T ss_pred CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCC
Confidence 89999999976799999999999999999999999999999999888765445688999999999999999999999999
Q ss_pred EEeecC-CCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 82 HVIPCY-QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 82 ~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
+|++.+ ...|+.|.+|..+..+.|..... .|.. .+ |++++|+.++.+.++++|++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~---~~~~-~~------------------g~~a~~~~v~~~~~~~lp~~~~ 138 (333)
T cd08296 81 RVGVGWHGGHCGTCDACRRGDFVHCENGKV---TGVT-RD------------------GGYAEYMLAPAEALARIPDDLD 138 (333)
T ss_pred EEEeccccCCCCCChhhhCcCcccCCCCCc---cCcc-cC------------------CcceeEEEEchhheEeCCCCCC
Confidence 998754 45799999999999999987653 2221 12 4999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
+.+++.+++.+.+||+++.. .++.++++|||+|+|.+|++++++|+++|+ +|+++++++++.+.++++|+++++++.+
T Consensus 139 ~~~aa~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~ 216 (333)
T cd08296 139 AAEAAPLLCAGVTTFNALRN-SGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK 216 (333)
T ss_pred HHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC
Confidence 99999999999999998854 489999999999999999999999999999 7999999999999999999999988766
Q ss_pred CCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeeecCCCcc
Q 017431 241 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGFKS 319 (371)
Q Consensus 241 ~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~ 319 (371)
.++...+.+. +++|+++|++|....+..++++++++ |+++.+|... ...+++...+ .++.++.++....
T Consensus 217 --~~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~i~~~~~~~--- 286 (333)
T cd08296 217 --EDVAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAAG--EPVAVSPLQLIMGRKSIHGWPSGT--- 286 (333)
T ss_pred --ccHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccC-CEEEEEecCC--CCCCcCHHHHhhcccEEEEeCcCC---
Confidence 4566666655 37999999998667799999999996 9999998754 2344444433 3488888876432
Q ss_pred cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 320 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
..++..+++++.++.++ +.+ +.|+++++++|++.+.+++.. |+|++
T Consensus 287 ~~~~~~~~~~~~~~~l~--~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 287 ALDSEDTLKFSALHGVR--PMV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred HHHHHHHHHHHHhCCCC--ceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 24678888888887765 334 689999999999999998876 98874
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal |
| >cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-42 Score=327.39 Aligned_cols=336 Identities=26% Similarity=0.404 Sum_probs=279.0
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC---------CCCCcccccceeEEEEEeCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE---------GLFPCILGHEAAGIVESVGE 72 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~---------~~~p~v~G~e~~G~V~~~G~ 72 (371)
|||+++.+++. +++++.|.|++.+++|+||+.++++|+.|++.+.|.... .++|.++|||++|+|+++|+
T Consensus 1 mka~~~~~~~~-~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~ 79 (350)
T cd08256 1 MRAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE 79 (350)
T ss_pred CeeEEEecCCc-eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence 79999999876 999999999999999999999999999999988875311 14677899999999999999
Q ss_pred CCC--CCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEeccc
Q 017431 73 GVT--EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV 150 (371)
Q Consensus 73 ~v~--~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~ 150 (371)
+++ .+++||+|++.+..+|+.|..|..++.+.|.... .+|... ...|+|++|+.++++
T Consensus 80 ~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~-----------------~~~g~~~~~~~~~~~ 139 (350)
T cd08256 80 GAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHD---LYGFQN-----------------NVNGGMAEYMRFPKE 139 (350)
T ss_pred CcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCcc---ceeecc-----------------CCCCcceeeEEcccc
Confidence 999 8999999999999999999999999999996432 222210 012499999999988
Q ss_pred -ceEecCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 017431 151 -SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 229 (371)
Q Consensus 151 -~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~ 229 (371)
.++++|+++++++|+.+ .+++++|+++ +..++++|++|||.|+|.+|++++++|+++|+..++++++++++.+++++
T Consensus 140 ~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~ 217 (350)
T cd08256 140 AIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARK 217 (350)
T ss_pred cceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHH
Confidence 67899999999999988 7899999987 78899999999997779999999999999998778889999999999999
Q ss_pred cCCcEEecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceE
Q 017431 230 FGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRV 308 (371)
Q Consensus 230 ~g~~~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~ 308 (371)
+|++.+++..+ ..+.+.+.+.+++ ++|+++|++|+...+..++++++++ |+++.+|.......+.+......++++
T Consensus 218 ~g~~~v~~~~~--~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~ 294 (350)
T cd08256 218 FGADVVLNPPE--VDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSVFGDPVTVDWSIIGDRKELD 294 (350)
T ss_pred cCCcEEecCCC--cCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEccCCCCCccChhHhhcccccE
Confidence 99988888765 5677788888877 8999999999766789999999996 999999865432222222111223566
Q ss_pred EEeeecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEE
Q 017431 309 WKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 367 (371)
Q Consensus 309 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl 367 (371)
+.++.... ..+.+++++++++.+++.++++++|+++++++|++.+++++.. |+++
T Consensus 295 i~~~~~~~----~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 295 VLGSHLGP----YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred EEEeccCc----hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 66665432 3688899999999988655578999999999999999987765 8764
|
This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, |
| >cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-42 Score=326.22 Aligned_cols=337 Identities=28% Similarity=0.424 Sum_probs=284.8
Q ss_pred cceEEeecCCCCeEEEEeeCCCC-CCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
|||+++.+++. +++++.|.|+| .++||+|+++++++|+.|+..+.|.++...+|.++|||++|+|+++|++++.+++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~G 79 (345)
T cd08286 1 MKALVYHGPGK-ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVG 79 (345)
T ss_pred CceEEEecCCc-eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCC
Confidence 79999999887 99999999986 89999999999999999999998876655568899999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEeccc--ceEecCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ 158 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~v~~lP~~ 158 (371)
|+|++.+..+|++|.+|..+..+.|...... .|.. .+ |+|++|+.++.+ .++++|++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~------------------g~~~~~~~v~~~~~~~~~lp~~ 138 (345)
T cd08286 80 DRVLISCISSCGTCGYCRKGLYSHCESGGWI--LGNL-ID------------------GTQAEYVRIPHADNSLYKLPEG 138 (345)
T ss_pred CEEEECCcCCCCCChHHHCcCcccCCCcccc--cccc-cC------------------CeeeeEEEcccccCceEECCCC
Confidence 9999999999999999999999999855321 1111 22 499999999987 89999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
++..+++.+++.+++||.++....++.++++|||.|+|++|.+++|+|+.+|+.+|+++++++++.++++++|++.++++
T Consensus 139 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~ 218 (345)
T cd08286 139 VDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNS 218 (345)
T ss_pred CCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecc
Confidence 99999999999999999987778889999999999889999999999999994488889899999999999999999988
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchh-eeeceEEEeeecCC
Q 017431 239 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFGG 316 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~ 316 (371)
.+ .++...+.+.+++ ++|+++||++....+..+++.++++ |+++.+|.... ...++... +.+++++.+....
T Consensus 219 ~~--~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~- 292 (345)
T cd08286 219 AK--GDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVHGK--PVDLHLEKLWIKNITITTGLVD- 292 (345)
T ss_pred cc--ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEEEecccCC--CCCcCHHHHhhcCcEEEeecCc-
Confidence 76 5566777777776 8999999999877789999999996 99999986432 23344433 3346777664322
Q ss_pred CcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCC---CeeEEEEec
Q 017431 317 FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGG---DCLRCVLKM 369 (371)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~---~~~kvvl~~ 369 (371)
.+.+..++++++++.+++.++++++|+++++++|++.+.+. +..|++|++
T Consensus 293 ---~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 293 ---TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred ---hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 14578889999999988766678999999999999999876 345999874
|
This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers ( |
| >cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-42 Score=329.38 Aligned_cols=354 Identities=28% Similarity=0.397 Sum_probs=284.4
Q ss_pred cceEEeecCCCCeEEEEeeCCCC-CCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
|||+++.+++. +++++.|.|.| .+++|+||+.++++|++|+..+.|.++..++|.++|||++|+|+++|++++.+++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 79 (386)
T cd08283 1 MKALVWHGKGD-VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVG 79 (386)
T ss_pred CeeEEEecCCC-ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Confidence 89999998865 99999999988 49999999999999999999999987655678899999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCC-ccceecCCCccccccCCcceeecc--CCcceeeeEEeccc--ceEec
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGAT-GAGVMMNDRKSRFSINGKPIYHFM--GTSTFSQYTVVHDV--SVAKI 155 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~g~~~~~~~~~~~~~~~--~~g~~a~~~~v~~~--~v~~l 155 (371)
|+|++.+..+|+.|.+|..+..++|++..... ..+ ..|....++.| ..+.+ ..|+|++|++++.+ .++++
T Consensus 80 d~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~~~~~~g~~~~~~~v~~~~~~~~~l 154 (386)
T cd08283 80 DRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAK---LYGHAGAGIFG--YSHLTGGYAGGQAEYVRVPFADVGPFKI 154 (386)
T ss_pred CEEEEcCcCCCCCChhhcCCCcccCCCccccccccc---ccccccccccc--cccccCCCCCeeEEEEEcccccCeEEEC
Confidence 99999998899999999999999998754321 000 00000000000 00000 13699999999987 89999
Q ss_pred CCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE
Q 017431 156 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 235 (371)
Q Consensus 156 P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v 235 (371)
|+++++++|+.++..+++||+++ ...++.+|++|||+|+|.+|.+++++|+++|+.+|+++++++++.+++++++...+
T Consensus 155 p~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~v 233 (386)
T cd08283 155 PDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAET 233 (386)
T ss_pred CCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEE
Confidence 99999999999999999999998 88899999999999889999999999999998669999999999999999844467
Q ss_pred ecCCCCCc-hHHHHHHhhcCC-CccEEEEccCC---------------------HHHHHHHHHHhccCCceEEEEccCCC
Q 017431 236 VNPKDHDK-PIQQVLVDLTDG-GVDYSFECIGN---------------------VSVMRAALECCHKGWGTSVIVGVAAS 292 (371)
Q Consensus 236 i~~~~~~~-~~~~~~~~~~~g-g~dvvid~~g~---------------------~~~~~~~~~~l~~~~G~iv~~g~~~~ 292 (371)
+++.+ . ++.+.+.+.+++ ++|++||++|+ ...++.++++++++ |+++.+|....
T Consensus 234 i~~~~--~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~g~~~~ 310 (386)
T cd08283 234 INFEE--VDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKG-GTVSIIGVYGG 310 (386)
T ss_pred EcCCc--chHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccC-CEEEEEcCCCC
Confidence 76655 4 477888888877 89999999975 24688999999996 99999987532
Q ss_pred CCcccccc-hheeeceEEEeeecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCC-e-eEEEEec
Q 017431 293 GQEISTRP-FQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD-C-LRCVLKM 369 (371)
Q Consensus 293 ~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~-~-~kvvl~~ 369 (371)
. ...++. ..+.++.++.+.... ..+.+..+++++.++++.+.++++++|+++++++|++.+.+++ . .|++|+.
T Consensus 311 ~-~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 386 (386)
T cd08283 311 T-VNKFPIGAAMNKGLTLRMGQTH---VQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLKP 386 (386)
T ss_pred C-cCccCHHHHHhCCcEEEeccCC---chHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 1 222333 223346677665422 2356888999999999887666778999999999999998876 3 4999863
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T |
| >TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-43 Score=324.46 Aligned_cols=302 Identities=22% Similarity=0.301 Sum_probs=239.2
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecC-ccccccccCCCCC---CCCCcccccceeEEEEEeCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALC-HTDAYTWSGKDPE---GLFPCILGHEAAGIVESVGEGVTE 76 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~-~~D~~~~~g~~~~---~~~p~v~G~e~~G~V~~~G~~v~~ 76 (371)
+||++++.+++. +++++.|.|+|.++||+|||++++|| ++|++.+.|..+. ..+|.++|||++|+|+++|+++ +
T Consensus 1 ~~ka~~~~~~~~-l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~ 78 (308)
T TIGR01202 1 KTQAIVLSGPNQ-IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-G 78 (308)
T ss_pred CceEEEEeCCCe-EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-C
Confidence 689999998876 99999999999999999999999996 7999988887643 2579999999999999999998 5
Q ss_pred CCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecC
Q 017431 77 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 156 (371)
Q Consensus 77 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP 156 (371)
|++||||++. +..|..|.. | .+ |+|+||+.++++.++++|
T Consensus 79 ~~vGdrV~~~----~~~c~~~~~---------------~---~~------------------G~~aey~~v~~~~~~~ip 118 (308)
T TIGR01202 79 FRPGDRVFVP----GSNCYEDVR---------------G---LF------------------GGASKRLVTPASRVCRLD 118 (308)
T ss_pred CCCCCEEEEe----Ccccccccc---------------c---cC------------------CcccceEEcCHHHceeCC
Confidence 9999999863 223322211 0 12 399999999999999999
Q ss_pred CCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEe
Q 017431 157 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 236 (371)
Q Consensus 157 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi 236 (371)
++++++. +.++ .+.|||+++.. . ..++++|||+|+|++|++++|+|+++|++.|++++.++++++.+.++ .++
T Consensus 119 ~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i 191 (308)
T TIGR01202 119 PALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVL 191 (308)
T ss_pred CCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---ccc
Confidence 9999754 5454 56899998754 2 34688999999999999999999999996677787777777766543 344
Q ss_pred cCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeeecC
Q 017431 237 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFG 315 (371)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~ 315 (371)
++.+ . .+.++|++|||+|++.+++.++++++++ |+++.+|..... .+++...+ .+++++.++...
T Consensus 192 ~~~~--~---------~~~g~Dvvid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~~~~~i~~~~~~ 257 (308)
T TIGR01202 192 DPEK--D---------PRRDYRAIYDASGDPSLIDTLVRRLAKG-GEIVLAGFYTEP--VNFDFVPAFMKEARLRIAAEW 257 (308)
T ss_pred Chhh--c---------cCCCCCEEEECCCCHHHHHHHHHhhhcC-cEEEEEeecCCC--cccccchhhhcceEEEEeccc
Confidence 4322 1 1238999999999987899999999997 999999975432 33333332 346777776432
Q ss_pred CCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCe-eEEEEe
Q 017431 316 GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDC-LRCVLK 368 (371)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~-~kvvl~ 368 (371)
..++++.++++++++++++.++++++|+|+|+++|++.+.++.. .|++|+
T Consensus 258 ---~~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 258 ---QPGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred ---chhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 23579999999999999988889999999999999998776544 599874
|
|
| >cd05284 arabinose_DH_like D-arabinose dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-42 Score=323.26 Aligned_cols=332 Identities=29% Similarity=0.435 Sum_probs=283.3
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC---CCCCcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE---GLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~---~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
|||+++.++++++++.+.+.|++++++|+|++.++++|++|+....|.++. ..+|.++|+|++|+|+++|++++.++
T Consensus 1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~ 80 (340)
T cd05284 1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK 80 (340)
T ss_pred CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence 799999999888999999999999999999999999999999988887642 35688999999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||+|++.+..+|+.|..|+.+..++|.+... .|+. .+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~v~~~~~~~~P~~ 138 (340)
T cd05284 81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARF---PGIG-TD------------------GGFAEYLLVPSRRLVKLPRG 138 (340)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCCCCcc---cCcc-CC------------------CcceeeEEecHHHeEECCCC
Confidence 99999999989999999999999999987664 2322 33 39999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhc-CCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhcCCcEEe
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNT-AKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNFGVTEFV 236 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~-~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~v~~v~~~~~~~~~~~~~g~~~vi 236 (371)
+++++++.+++.+.|||+++... ..+.++++|||+|+|.+|++++++|+.+| + +|+++++++++.+.++++|+++++
T Consensus 139 ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~ 217 (340)
T cd05284 139 LDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVL 217 (340)
T ss_pred CCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEE
Confidence 99999999999999999998766 46889999999999889999999999999 6 888888889999999999999998
Q ss_pred cCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchh-eeeceEEEeeec
Q 017431 237 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAF 314 (371)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~ 314 (371)
++++ . +.+.+.+++++ ++|+++|++|+...++.++++++++ |+++.+|.... ..++... +.++.++.++..
T Consensus 218 ~~~~--~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~---~~~~~~~~~~~~~~~~~~~~ 290 (340)
T cd05284 218 NASD--D-VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGH---GRLPTSDLVPTEISVIGSLW 290 (340)
T ss_pred cCCc--c-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEEcCCCC---CccCHHHhhhcceEEEEEec
Confidence 8776 4 77778888877 8999999999867799999999996 99999986532 2222222 334777776654
Q ss_pred CCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 315 GGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
. ..+.+..+++++.++.+++ ..+.|+++++++|++.+.+++.. |+++.+
T Consensus 291 ~---~~~~~~~~~~~l~~g~l~~---~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 291 G---TRAELVEVVALAESGKVKV---EITKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred c---cHHHHHHHHHHHHhCCCCc---ceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 3 2357888999999998764 34689999999999999988776 888753
|
This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d |
| >cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-42 Score=322.99 Aligned_cols=360 Identities=32% Similarity=0.539 Sum_probs=290.3
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCC---CC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE---VQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~---~~ 78 (371)
|||+++.+++.++++.+.|+|.+.++||+|++.++++|++|+..+.|.++. .+|.++|||++|+|+++|++++. ++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~p~~~g~e~~G~v~~vG~~~~~~~~~~ 79 (367)
T cd08263 1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF-PPPFVLGHEISGEVVEVGPNVENPYGLS 79 (367)
T ss_pred CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC-CCCcccccccceEEEEeCCCCCCCCcCC
Confidence 799999999877999999999999999999999999999999988887654 57889999999999999999988 99
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccC-CcceeeccCCcceeeeEEecccceEecCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSIN-GKPIYHFMGTSTFSQYTVVHDVSVAKIDP 157 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~-~~~~~~~~~~g~~a~~~~v~~~~v~~lP~ 157 (371)
+||+|++.+..+|+.|.+|+.+..++|.....+..++....+|+...... ++..+ ....|++++|+.++.+.++++|+
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~P~ 158 (367)
T cd08263 80 VGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVY-MYSMGGLAEYAVVPATALAPLPE 158 (367)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccc-cccCCcceeEEEechhhEEECCC
Confidence 99999998888999999999999999987652211110001111111100 00000 01236999999999999999999
Q ss_pred CCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 158 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
++++.+++.++++++|||.++.....+.++++|||+|+|.+|++++++|+.+|+.+|+++++++++.+.++++|++.+++
T Consensus 159 ~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~ 238 (367)
T cd08263 159 SLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVN 238 (367)
T ss_pred CCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEec
Confidence 99999999999999999999888888899999999988999999999999999955998988999999999999999998
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeeecC
Q 017431 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFG 315 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~ 315 (371)
.++ .++...+.+..++ ++|+++|++++......++++++++ |+++.+|.........++...+ .++.++.++...
T Consensus 239 ~~~--~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (367)
T cd08263 239 AAK--EDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGA 315 (367)
T ss_pred CCc--ccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCccccCHHHHhhCCeEEEecCCC
Confidence 876 5677778887766 8999999999964789999999996 9999998653222233333333 346666664321
Q ss_pred CCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 316 GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
...+.++.+++++.++.+++.+.+++.|+++++.+|++.+.+++.. |+||+
T Consensus 316 --~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 316 --RPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred --CcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 1235688899999999988765678899999999999999988866 88874
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu |
| >cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=320.74 Aligned_cols=336 Identities=27% Similarity=0.430 Sum_probs=281.8
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCC------------CCCCCcccccceeEEEEE
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP------------EGLFPCILGHEAAGIVES 69 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~------------~~~~p~v~G~e~~G~V~~ 69 (371)
|||+++..++.+++++++|.|++.++||+|++.++++|++|++.+.|.++ ...+|.++|+|++|+|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~ 80 (350)
T cd08240 1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA 80 (350)
T ss_pred CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence 89999999988899999999999999999999999999999998887653 224577899999999999
Q ss_pred eCCCCCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecc
Q 017431 70 VGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD 149 (371)
Q Consensus 70 ~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 149 (371)
+|++++++++||+|++.+...|+.|..|+.+.+++|..... .|.. . .|++++|+.++.
T Consensus 81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~------------------~g~~~~~~~~~~ 138 (350)
T cd08240 81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRA---LGIF-Q------------------DGGYAEYVIVPH 138 (350)
T ss_pred eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCc---eeee-c------------------cCcceeeEEecH
Confidence 99999999999999999999999999999999999965421 1111 1 249999999999
Q ss_pred cceEecCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 017431 150 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 229 (371)
Q Consensus 150 ~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~ 229 (371)
+.++++|+++++.+++.+++.+.|||+++.....+.++++|||+|+|++|++++|+|+.+|+++|+++++++++.+.+++
T Consensus 139 ~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~ 218 (350)
T cd08240 139 SRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKA 218 (350)
T ss_pred HHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999998777777789999999889999999999999999788899899999999999
Q ss_pred cCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEE
Q 017431 230 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVW 309 (371)
Q Consensus 230 ~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~ 309 (371)
+|++.+++.++ ..+.+.+.+..++++|++||++|+...+..++++|+++ |+++.+|.............. .++.++
T Consensus 219 ~g~~~~~~~~~--~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~-~~~~~i 294 (350)
T cd08240 219 AGADVVVNGSD--PDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGEATLPLPLLP-LRALTI 294 (350)
T ss_pred hCCcEEecCCC--ccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCCCCcccHHHHh-hcCcEE
Confidence 99988887765 55666677766558999999999777899999999996 999999875432222222222 246677
Q ss_pred EeeecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 310 KGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 310 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
.++.... .+++..++++++++.++.. ..+.|+++++++|++.+.+++.. |++++
T Consensus 295 ~~~~~~~---~~~~~~~~~ll~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 295 QGSYVGS---LEELRELVALAKAGKLKPI--PLTERPLSDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred EEcccCC---HHHHHHHHHHHHcCCCccc--eeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence 7665432 2578889999999987643 56789999999999999887765 88875
|
6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy |
| >cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-41 Score=317.92 Aligned_cols=339 Identities=27% Similarity=0.448 Sum_probs=285.0
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 81 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd 81 (371)
|||+++.+++.++++++.|.|.+.+++|+||+.++++|+.|+....|..+...+|.++|+|++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd 80 (345)
T cd08260 1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGD 80 (345)
T ss_pred CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCC
Confidence 89999999888899999999999999999999999999999999888766556688999999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEeccc--ceEecCCCC
Q 017431 82 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQA 159 (371)
Q Consensus 82 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~v~~lP~~~ 159 (371)
+|+..+..+|++|.+|+.+..+.|+.... .|+. +.|+|++|+.++.. .++++|+++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------------------~~g~~~~~~~v~~~~~~~~~iP~~~ 138 (345)
T cd08260 81 RVTVPFVLGCGTCPYCRAGDSNVCEHQVQ---PGFT-------------------HPGSFAEYVAVPRADVNLVRLPDDV 138 (345)
T ss_pred EEEECCCCCCCCCccccCcCcccCCCCcc---cccC-------------------CCCcceeEEEcccccCceEECCCCC
Confidence 99988888999999999999999986431 1211 12499999999974 899999999
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCC
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 239 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~ 239 (371)
++++++.+++.+++||+++....++.++++|||+|+|.+|++++++|+.+|+ +|+++++++++.+.++++|++++++.+
T Consensus 139 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~ 217 (345)
T cd08260 139 DFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNAS 217 (345)
T ss_pred CHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEccc
Confidence 9999999999999999998888889999999999999999999999999999 899998999999999999999898875
Q ss_pred CCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCc-ccccchhe-eeceEEEeeecCCC
Q 017431 240 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE-ISTRPFQL-VTGRVWKGTAFGGF 317 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~-~~~~~~~~-~~~~~~~g~~~~~~ 317 (371)
+ ..++...+.++..+++|++|||+|+...+...+++++++ |+++.+|....... ..++...+ .++.++.++...
T Consensus 218 ~-~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 293 (345)
T cd08260 218 E-VEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGM-- 293 (345)
T ss_pred c-chhHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcC--
Confidence 4 134666676666558999999999767789999999996 99999987533221 23333333 346677766532
Q ss_pred cccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 318 KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
..+.++.++++++++.+.+.+.+.+.++++++++|++.+.+++.. |+|++
T Consensus 294 -~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 294 -PAHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred -CHHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 235788899999999887655577899999999999999987776 87753
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty |
| >cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-41 Score=316.67 Aligned_cols=338 Identities=28% Similarity=0.417 Sum_probs=276.0
Q ss_pred cceEEeecCCCCeEEEEeeCCCCC-CCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQ-AGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~-~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
|||+++..++ .+++++.|+|.|. +++|+|++.++++|+.|++...|.++ ...|.++|+|++|+|+++|++++.+++|
T Consensus 1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~G 78 (344)
T cd08284 1 MKAVVFKGPG-DVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLKVG 78 (344)
T ss_pred CeeEEEecCC-CceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccCCC
Confidence 7899998875 4999999999985 99999999999999999998888765 3457889999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEeccc--ceEecCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ 158 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~v~~lP~~ 158 (371)
|+|++.+..+|+.|.+|+.+....|.........+. ....|+|++|+.++.+ .++++|++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~g~~~~~~~v~~~~~~~~~~p~~ 140 (344)
T cd08284 79 DRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGS------------------PNLDGAQAEYVRVPFADGTLLKLPDG 140 (344)
T ss_pred CEEEEcccCCCCCChHHhCcCcccCCCCcccccccc------------------CCCCCceeEEEEcccccCceEECCCC
Confidence 999999989999999999999999975432100010 0112499999999865 99999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
+++++|+.++++++|||+++. ...+.+|++|||+|+|.+|++++++|+.+|+.+|+++++++++.++++++|+. .++.
T Consensus 141 l~~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~ 218 (344)
T cd08284 141 LSDEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINF 218 (344)
T ss_pred CCHHHhhhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEec
Confidence 999999999999999999885 47889999999998899999999999999975788888888999999999975 4555
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchh-eeeceEEEeeecCC
Q 017431 239 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFGG 316 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~ 316 (371)
+. .++...+.+++++ ++|++||++++...+..++++++++ |+++.+|..... ........ +.++.++.+..
T Consensus 219 ~~--~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~--- 291 (344)
T cd08284 219 ED--AEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVHTAE-EFPFPGLDAYNKNLTLRFGR--- 291 (344)
T ss_pred CC--cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECcCCCC-CccccHHHHhhcCcEEEEec---
Confidence 44 4577778888877 9999999999877899999999996 999999875321 22222222 23455555331
Q ss_pred CcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEe
Q 017431 317 FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 368 (371)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~ 368 (371)
......++.+++++.++.+++.+++.++|+++++++|++.+.+++..|+|+.
T Consensus 292 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~Vi~ 343 (344)
T cd08284 292 CPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKVLKVVLD 343 (344)
T ss_pred CCcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCceEEEec
Confidence 1234678899999999998765557789999999999998887655788874
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical |
| >cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=315.78 Aligned_cols=309 Identities=20% Similarity=0.226 Sum_probs=252.8
Q ss_pred cceEEeecCCCC-----eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCC
Q 017431 2 CKAAVAWEPNKP-----LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVT 75 (371)
Q Consensus 2 ~~a~~~~~~~~~-----~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~ 75 (371)
|||+++.+++.| +++++.|.|.|.++||+||+.++++|++|++.+.|.++. ..+|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 80 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL 80 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence 799999998853 888899999999999999999999999999999887643 35788999999999999999999
Q ss_pred C-CCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEe
Q 017431 76 E-VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK 154 (371)
Q Consensus 76 ~-~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~ 154 (371)
+ |++||+|+..+. .+ |+|++|+.++++.+++
T Consensus 81 ~~~~vGd~V~~~~~------------------------------~~------------------g~~a~~~~v~~~~~~~ 112 (324)
T cd08291 81 AQSLIGKRVAFLAG------------------------------SY------------------GTYAEYAVADAQQCLP 112 (324)
T ss_pred ccCCCCCEEEecCC------------------------------CC------------------CcchheeeecHHHeEE
Confidence 6 999999985321 01 3999999999999999
Q ss_pred cCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEE--cCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 017431 155 IDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF--GLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 232 (371)
Q Consensus 155 lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~--Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~ 232 (371)
+|+++++++|+.+++.++|||.. ...... ++++++|+ |+|++|++++|+|+.+|+ +|+++++++++.++++++|+
T Consensus 113 iP~~~~~~~aa~~~~~~~ta~~~-~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~ 189 (324)
T cd08291 113 LPDGVSFEQGASSFVNPLTALGM-LETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGA 189 (324)
T ss_pred CCCCCCHHHHhhhcccHHHHHHH-HHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCC
Confidence 99999999999888899999854 455555 56666665 459999999999999999 79999999999999999999
Q ss_pred cEEecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchh-eeeceEEE
Q 017431 233 TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWK 310 (371)
Q Consensus 233 ~~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~~~ 310 (371)
++++++.+ .++.+.+++.+++ ++|++||++|+.. ....+++++++ |+++.+|.........++... +.+++++.
T Consensus 190 ~~~i~~~~--~~~~~~v~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 265 (324)
T cd08291 190 EYVLNSSD--PDFLEDLKELIAKLNATIFFDAVGGGL-TGQILLAMPYG-STLYVYGYLSGKLDEPIDPVDLIFKNKSIE 265 (324)
T ss_pred cEEEECCC--ccHHHHHHHHhCCCCCcEEEECCCcHH-HHHHHHhhCCC-CEEEEEEecCCCCcccCCHHHHhhcCcEEE
Confidence 99998876 6788888888887 9999999999854 67889999996 999999864322111132222 34478888
Q ss_pred eeecCCCcc---cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 311 GTAFGGFKS---RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 311 g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
++....+.. .++++.++++++ +.+ .+.++++|+|+|+++|++.+.+++.. |++|+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 266 GFWLTTWLQKLGPEVVKKLKKLVK-TEL--KTTFASRYPLALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred EEEHHHhhcccCHHHHHHHHHHHh-Ccc--ccceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence 877654421 245777888887 654 46688999999999999999987775 98874
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin |
| >cd08246 crotonyl_coA_red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-41 Score=318.99 Aligned_cols=337 Identities=21% Similarity=0.270 Sum_probs=272.1
Q ss_pred CcceEEeec--CCC---CeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCC----------CCCCCcccccceeE
Q 017431 1 MCKAAVAWE--PNK---PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP----------EGLFPCILGHEAAG 65 (371)
Q Consensus 1 ~~~a~~~~~--~~~---~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~----------~~~~p~v~G~e~~G 65 (371)
+|||+++.. ++. .++++++|.|+++++||+|++.++++|++|++...|... ....+.++|||++|
T Consensus 12 ~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e~~G 91 (393)
T cd08246 12 KMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASG 91 (393)
T ss_pred hhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccceEE
Confidence 589988863 332 388999999999999999999999999999988776511 11123578999999
Q ss_pred EEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeE
Q 017431 66 IVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYT 145 (371)
Q Consensus 66 ~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~ 145 (371)
+|+++|++++.+++||+|++.+...|+.|..|..+..++|..... +|+.-. .|+|++|+
T Consensus 92 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~~------------------~g~~a~y~ 150 (393)
T cd08246 92 IVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRI---WGYETN------------------YGSFAQFA 150 (393)
T ss_pred EEEEeCCCCCcCCCCCEEEEeccccccCccccccccccccccccc---ccccCC------------------CCcceeEE
Confidence 999999999999999999999999999999999999999975432 232111 24999999
Q ss_pred EecccceEecCCCCCcchhhhccccchhhhhhhhhc--CCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 146 VVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT--AKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 146 ~v~~~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
+++...++++|+++++++++.+++++.|||+++... .+++++++|||+|+ |++|++++++|+++|+ ++++++++++
T Consensus 151 ~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~~s~~ 229 (393)
T cd08246 151 LVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVSSEE 229 (393)
T ss_pred EechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEeCCHH
Confidence 999999999999999999999999999999988655 68899999999997 9999999999999999 7778888999
Q ss_pred hHHHHHhcCCcEEecCCCCC--------------------chHHHHHHhhcCC--CccEEEEccCCHHHHHHHHHHhccC
Q 017431 223 KFDRAKNFGVTEFVNPKDHD--------------------KPIQQVLVDLTDG--GVDYSFECIGNVSVMRAALECCHKG 280 (371)
Q Consensus 223 ~~~~~~~~g~~~vi~~~~~~--------------------~~~~~~~~~~~~g--g~dvvid~~g~~~~~~~~~~~l~~~ 280 (371)
+.++++++|++++++.++.+ ..+.+.+.+++++ ++|+++|++|+ ..+..++++++++
T Consensus 230 ~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~-~~~~~~~~~l~~~ 308 (393)
T cd08246 230 KAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGR-ATFPTSVFVCDRG 308 (393)
T ss_pred HHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCch-HhHHHHHHHhccC
Confidence 99999999999988864421 1355677777776 79999999998 5689999999996
Q ss_pred CceEEEEccCCCCCcccccchhee-eceEEEeeecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhC
Q 017431 281 WGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHG 359 (371)
Q Consensus 281 ~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~ 359 (371)
|+++.+|.... ....+....+. ++.++.++.... .+++..+++++.++.+.+ .++++|+++++++|++.+.+
T Consensus 309 -G~~v~~g~~~~-~~~~~~~~~l~~~~~~i~g~~~~~---~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~~~~~ 381 (393)
T cd08246 309 -GMVVICAGTTG-YNHTYDNRYLWMRQKRIQGSHFAN---DREAAEANRLVMKGRIDP--CLSKVFSLDETPDAHQLMHR 381 (393)
T ss_pred -CEEEEEcccCC-CCCCCcHHHHhhheeEEEecccCc---HHHHHHHHHHHHcCCcee--eeeEEEeHHHHHHHHHHHHh
Confidence 99999986432 12223323222 366676665432 246888999999998763 46789999999999999988
Q ss_pred C-Cee-EEEE
Q 017431 360 G-DCL-RCVL 367 (371)
Q Consensus 360 ~-~~~-kvvl 367 (371)
+ +.. |+++
T Consensus 382 ~~~~~gkvvv 391 (393)
T cd08246 382 NQHHVGNMAV 391 (393)
T ss_pred CccccceEEE
Confidence 7 565 7765
|
Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma |
| >cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=315.27 Aligned_cols=343 Identities=29% Similarity=0.395 Sum_probs=273.4
Q ss_pred cceEEeecCCCCeEEEEeeCCCC-CCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
||++++.+++. ++++++|+|++ .++||+|||.++++|++|++.+.|.++ ..+|.++|||++|+|+++|++++.+++|
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~G 78 (375)
T cd08282 1 MKAVVYGGPGN-VAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLKVG 78 (375)
T ss_pred CceEEEecCCc-eeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCCCC
Confidence 78999988864 99999999996 799999999999999999999988765 3468899999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCC---ccceecCCCccccccCCcceeeccCCcceeeeEEeccc--ceEec
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGAT---GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKI 155 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~v~~l 155 (371)
|+|++.+..+|+.|..|+.+..+.|.+..... .+|+. . ..+ ..|+|++|+.++.+ .++++
T Consensus 79 d~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~--~-----------~~~--~~g~~a~y~~v~~~~~~~~~l 143 (375)
T cd08282 79 DRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYV--D-----------MGP--YGGGQAEYLRVPYADFNLLKL 143 (375)
T ss_pred CEEEEeCCCCCCCCHHHHCcCcccCCCCCccccccccccc--c-----------cCC--CCCeeeeEEEeecccCcEEEC
Confidence 99999999999999999999999997643110 00100 0 000 02499999999976 89999
Q ss_pred CCCCCcc---hhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 017431 156 DPQAPLD---KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 232 (371)
Q Consensus 156 P~~~~~~---~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~ 232 (371)
|++++++ +++.++.++++||+++ ...++.+|++|||.|+|.+|++++|+|+++|+.+|+++++++++.++++++|+
T Consensus 144 P~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~ 222 (375)
T cd08282 144 PDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGA 222 (375)
T ss_pred CCCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC
Confidence 9999998 5677888899999988 78899999999999889999999999999998678889999999999999998
Q ss_pred cEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHH-----------HHHHHHHHhccCCceEEEEccCCCCC-------
Q 017431 233 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS-----------VMRAALECCHKGWGTSVIVGVAASGQ------- 294 (371)
Q Consensus 233 ~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~-----------~~~~~~~~l~~~~G~iv~~g~~~~~~------- 294 (371)
..+++.+ .++.+.+.+++++++|+++||+|+.. .+..++++++++ |+++.+|......
T Consensus 223 -~~v~~~~--~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~~ 298 (375)
T cd08282 223 -IPIDFSD--GDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIVGVYVAEDPGAGDAA 298 (375)
T ss_pred -eEeccCc--ccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC-cEEEEEeccCCccccccccc
Confidence 4566655 56777777776668999999999852 488999999996 9998887643211
Q ss_pred ----cccccchhee-eceEEEeeecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEec
Q 017431 295 ----EISTRPFQLV-TGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 369 (371)
Q Consensus 295 ----~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~ 369 (371)
...++...+. ++..+.+... ...+.++.+++++.++++++.++++++|+++++++|++.+.+++..|+|+++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~kvvv~~ 375 (375)
T cd08282 299 AKQGELSFDFGLLWAKGLSFGTGQA---PVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRLETKVVIKP 375 (375)
T ss_pred ccCccccccHHHHHhcCcEEEEecC---CchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCCceEEEeCC
Confidence 0112222222 2333433321 1235688899999999988655688999999999999999988833998863
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo |
| >PRK05396 tdh L-threonine 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-40 Score=309.78 Aligned_cols=337 Identities=25% Similarity=0.392 Sum_probs=272.6
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCC---CCCCCCcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD---PEGLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~---~~~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
||++++.++++.+++.+.|.|.|.++||+||+.++++|++|+.++.+.. ....+|.++|||++|+|+++|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~ 80 (341)
T PRK05396 1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK 80 (341)
T ss_pred CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence 7999999999889999999999999999999999999999998766532 1224677899999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||+|++.+..+|+.|..|..+..++|.... +.+.. .+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~------------------g~~~~~~~v~~~~~~~iP~~ 138 (341)
T PRK05396 81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTK---GVGVN-RP------------------GAFAEYLVIPAFNVWKIPDD 138 (341)
T ss_pred CCCEEEECCCCCCCCChhhhCcChhhCCCcc---eeeec-CC------------------CcceeeEEechHHeEECcCC
Confidence 9999999999999999999999999996532 12221 22 49999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
+++.+++.+ ..+.+++.++.. ...+|++|+|.|+|++|++++|+|+++|+++|+++++++++.++++++|+++++++
T Consensus 139 l~~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~ 215 (341)
T PRK05396 139 IPDDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNV 215 (341)
T ss_pred CCHHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecC
Confidence 998888754 466666655433 34689999999889999999999999999668888888999999999999999988
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCC
Q 017431 239 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF 317 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 317 (371)
++ .++.+.+.+.+++ ++|++|||.|+...+..++++++++ |+++.+|.......+.+ ...+.++.++.++....
T Consensus 216 ~~--~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~~- 290 (341)
T PRK05396 216 AK--EDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPGDMAIDW-NKVIFKGLTIKGIYGRE- 290 (341)
T ss_pred cc--ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCCCcccH-HHHhhcceEEEEEEccC-
Confidence 76 5677888888876 9999999999877899999999996 99999987542222222 12223366777654221
Q ss_pred cccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEecC
Q 017431 318 KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKMQ 370 (371)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~~ 370 (371)
..+.+..+++++.++ +++.+.+.++|+++++++|++.+.+++..|++++++
T Consensus 291 -~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~a~~~~~~~~~gk~vv~~~ 341 (341)
T PRK05396 291 -MFETWYKMSALLQSG-LDLSPIITHRFPIDDFQKGFEAMRSGQSGKVILDWD 341 (341)
T ss_pred -ccchHHHHHHHHHcC-CChhHheEEEEeHHHHHHHHHHHhcCCCceEEEecC
Confidence 123456788888888 545555779999999999999998876449999874
|
|
| >cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-40 Score=310.93 Aligned_cols=334 Identities=28% Similarity=0.441 Sum_probs=276.4
Q ss_pred cceEEeecCCCCeEEEEeeCCCC-CCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
||++++.+++. +++.+.|+|+| .++||+||+.++++|++|++.+.|..+. ..|.++|||++|+|+++|++++.+++|
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~vG~~v~~~~~G 78 (345)
T cd08287 1 MRATVIHGPGD-IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT-RAPAPIGHEFVGVVEEVGSEVTSVKPG 78 (345)
T ss_pred CceeEEecCCc-eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC-CCCcccccceEEEEEEeCCCCCccCCC
Confidence 79999998876 99999999986 8999999999999999999988887653 357899999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEeccc--ceEecCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ 158 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~v~~lP~~ 158 (371)
|+|++....+|+.|.+|..+..+.|..... +|.. .+| +|++|+.++.+ .++++|++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~g------------------~~~~~~~v~~~~~~~~~lP~~ 136 (345)
T cd08287 79 DFVIAPFAISDGTCPFCRAGFTTSCVHGGF---WGAF-VDG------------------GQGEYVRVPLADGTLVKVPGS 136 (345)
T ss_pred CEEEeccccCCCCChhhhCcCcccCCCCCc---ccCC-CCC------------------ceEEEEEcchhhCceEECCCC
Confidence 999886677899999999999988875432 2211 334 99999999975 99999999
Q ss_pred CCcchhh-----hccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCc
Q 017431 159 APLDKVC-----LLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 233 (371)
Q Consensus 159 ~~~~~aa-----~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~ 233 (371)
++++.+. ++...+.+||+++ ...++.+|++|+|.|+|.+|++++|+|+++|+++++++++++++.++++++|++
T Consensus 137 l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~ 215 (345)
T cd08287 137 PSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGAT 215 (345)
T ss_pred CChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCc
Confidence 9872221 2235688899887 477899999999988899999999999999996689998888899999999999
Q ss_pred EEecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccc-hheeeceEEEe
Q 017431 234 EFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP-FQLVTGRVWKG 311 (371)
Q Consensus 234 ~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~~~~~~~~g 311 (371)
.++++.+ ..+.+.+.+.+++ ++|+++|++|++..+..++++++++ |+++.+|.... ...++. ..+.++.++.+
T Consensus 216 ~v~~~~~--~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~~~~ 290 (345)
T cd08287 216 DIVAERG--EEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHG--GVELDVRELFFRNVGLAG 290 (345)
T ss_pred eEecCCc--ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEEEEecccCC--CCccCHHHHHhcceEEEE
Confidence 9998876 5677788888877 9999999999877899999999996 99999986542 233333 23445777766
Q ss_pred eecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEe
Q 017431 312 TAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 368 (371)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~ 368 (371)
.... ..+.+++++++++++.+++.++++++|+++++++|++.+.+++..|++|+
T Consensus 291 ~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~~~~ 344 (345)
T cd08287 291 GPAP---VRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAIKVLLR 344 (345)
T ss_pred ecCC---cHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCceEEEeC
Confidence 4321 23578889999999998866567799999999999999888776799986
|
This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-40 Score=310.66 Aligned_cols=324 Identities=23% Similarity=0.374 Sum_probs=262.4
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCC-----------CCCCCcccccceeEEEEEe
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-----------EGLFPCILGHEAAGIVESV 70 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~-----------~~~~p~v~G~e~~G~V~~~ 70 (371)
|||+++..+ +++++++|.|++.+++|+|++.++++|+.|++...|... ...+|.++|+|++|+|+++
T Consensus 1 m~a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v 78 (341)
T cd08262 1 MRAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY 78 (341)
T ss_pred CceEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence 799999877 699999999999999999999999999999998877321 2235788999999999999
Q ss_pred CCCCCC-CCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecc
Q 017431 71 GEGVTE-VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD 149 (371)
Q Consensus 71 G~~v~~-~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 149 (371)
|+++++ +++||+|++.+...|+.|..|..+... . .+ |+|++|+.++.
T Consensus 79 G~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~-------------~-~~------------------g~~~~~~~v~~ 126 (341)
T cd08262 79 GPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSP-------------E-AP------------------GGYAEYMLLSE 126 (341)
T ss_pred CCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCc-------------C-CC------------------CceeeeEEech
Confidence 999987 999999999999999999999432110 0 12 39999999999
Q ss_pred cceEecCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 017431 150 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 229 (371)
Q Consensus 150 ~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~ 229 (371)
+.++++|+++++++++ ++.++++||+++ ...++++|++|||+|+|.+|.+++|+|+.+|++.++++++++++.+++++
T Consensus 127 ~~~~~lP~~~s~~~a~-~~~~~~~a~~~~-~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~ 204 (341)
T cd08262 127 ALLLRVPDGLSMEDAA-LTEPLAVGLHAV-RRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALA 204 (341)
T ss_pred HHeEECCCCCCHHHhh-hhhhHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH
Confidence 9999999999998877 667888999984 78899999999999889999999999999999778888889999999999
Q ss_pred cCCcEEecCCCCCc--hHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchh-eee
Q 017431 230 FGVTEFVNPKDHDK--PIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVT 305 (371)
Q Consensus 230 ~g~~~vi~~~~~~~--~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~ 305 (371)
+|+++++++++.+. .+. .+.+...+ ++|+++|++|+...+..++++++++ |+++.+|....... +.+.. +.+
T Consensus 205 ~g~~~~i~~~~~~~~~~~~-~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~--~~~~~~~~~ 280 (341)
T cd08262 205 MGADIVVDPAADSPFAAWA-AELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCMESDN--IEPALAIRK 280 (341)
T ss_pred cCCcEEEcCCCcCHHHHHH-HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCCc--cCHHHHhhc
Confidence 99988888765211 232 34445555 8999999999855688999999996 99999987532221 22222 234
Q ss_pred ceEEEeeecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 306 GRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 306 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
+.++.++... ..+++..++++++++.+++.+++.++|+++++++|++.+.+++.. |+|++
T Consensus 281 ~~~~~~~~~~---~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 281 ELTLQFSLGY---TPEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred ceEEEEEecc---cHHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 5565544321 224788899999999988766678999999999999999988776 88874
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i |
| >PLN02702 L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-40 Score=312.07 Aligned_cols=336 Identities=25% Similarity=0.398 Sum_probs=267.7
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCC---CCCCCcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~---~~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
|+++++..+.. +++++.+.|++.++||+||+.++++|++|++.+.+... ...+|.++|||++|+|+++|++++.|+
T Consensus 18 ~~~~~~~~~~~-l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (364)
T PLN02702 18 NMAAWLVGVNT-LKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLV 96 (364)
T ss_pred cceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCC
Confidence 56677777755 99999999999999999999999999999998876321 113577899999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||+|++.+..+|++|..|+.+..+.|..... ++.... .|+|++|+.++.+.++++|++
T Consensus 97 ~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~---~~~~~~------------------~g~~~~y~~v~~~~~~~~P~~ 155 (364)
T PLN02702 97 VGDRVALEPGISCWRCNLCKEGRYNLCPEMKF---FATPPV------------------HGSLANQVVHPADLCFKLPEN 155 (364)
T ss_pred CCCEEEEcCCCCCCCCcchhCcCcccCCCccc---cCCCCC------------------CCcccceEEcchHHeEECCCC
Confidence 99999999999999999999999999975321 111101 249999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
+++++|+.. .++.++|+++ ...++.+|++|||+|+|++|++++++|+.+|+..|+++++++++.++++++|+++++++
T Consensus 156 l~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~ 233 (364)
T PLN02702 156 VSLEEGAMC-EPLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLV 233 (364)
T ss_pred CCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEec
Confidence 999988752 2445577776 77889999999999999999999999999999778889889999999999999888765
Q ss_pred CCCCchHHHHHHhh---cCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeeec
Q 017431 239 KDHDKPIQQVLVDL---TDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAF 314 (371)
Q Consensus 239 ~~~~~~~~~~~~~~---~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~ 314 (371)
.....++.+.+.++ +++++|++||++|+...+..++++++++ |+++.+|.... ...+....+ .+++++.++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~ 310 (364)
T PLN02702 234 STNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHN--EMTVPLTPAAAREVDVVGVFR 310 (364)
T ss_pred CcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCC--CCcccHHHHHhCccEEEEecc
Confidence 43224565555544 2338999999999777899999999996 99999986432 122222222 33677777653
Q ss_pred CCCcccCcHHHHHHHHHcCCCCCCCceeeeeec--ccHHHHHHHHhCCCee-EEEEe
Q 017431 315 GGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTL--GEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
. ...+..+++++.++.+++.+.++++|++ +++++|++.+.+++.. |++|.
T Consensus 311 ~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 311 Y----RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred C----hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 2 2467889999999998766667788666 7999999998887665 99885
|
|
| >cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-40 Score=308.14 Aligned_cols=333 Identities=30% Similarity=0.514 Sum_probs=277.7
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 81 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd 81 (371)
|||+++.+++. +++.++|.|.+.+++|+|+|.++++|+.|+....|..+...+|.++|+|++|+|+++|++++.+++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (337)
T cd08261 1 MKALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGD 79 (337)
T ss_pred CeEEEEeCCCc-eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCC
Confidence 79999998875 99999999999999999999999999999999888765555688899999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCc
Q 017431 82 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 161 (371)
Q Consensus 82 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~ 161 (371)
+|+..+..+|+.|..|+.++.+.|..-.. .++ ...|+|++|+.++++ ++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~~g~~~~~v~v~~~-~~~~p~~~~~ 136 (337)
T cd08261 80 RVVVDPYISCGECYACRKGRPNCCENLQV---LGV-------------------HRDGGFAEYIVVPAD-ALLVPEGLSL 136 (337)
T ss_pred EEEECCCCCCCCChhhhCcCcccCCCCCe---eee-------------------cCCCcceeEEEechh-eEECCCCCCH
Confidence 99998889999999999999999953221 111 112499999999999 9999999999
Q ss_pred chhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCC
Q 017431 162 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241 (371)
Q Consensus 162 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~ 241 (371)
++|+.+ ..++++++++ ...++.+|++|||+|+|.+|.+++|+|+.+|+ +|+++.+++++.++++++|+++++++.+
T Consensus 137 ~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~- 212 (337)
T cd08261 137 DQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGD- 212 (337)
T ss_pred HHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCcc-
Confidence 999877 5778888876 77899999999999889999999999999999 7899988899999999999999998876
Q ss_pred CchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecCCCcc
Q 017431 242 DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKS 319 (371)
Q Consensus 242 ~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~ 319 (371)
..+.+.+.+.+++ ++|+++|++|+...+..++++|+++ |+++.+|..... ..++...+. +++++.+.. ...
T Consensus 213 -~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g~~~~~--~~~~~~~~~~~~~~~~~~~---~~~ 285 (337)
T cd08261 213 -EDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSKGP--VTFPDPEFHKKELTILGSR---NAT 285 (337)
T ss_pred -cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcCCCCC--CccCHHHHHhCCCEEEEec---cCC
Confidence 5677888888877 8999999998877789999999996 999999865322 222222222 255555542 123
Q ss_pred cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCC-ee-EEEEec
Q 017431 320 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD-CL-RCVLKM 369 (371)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~-~~-kvvl~~ 369 (371)
.+.++.+++++.++.+++.+.+..+|+++++++|++.+.+++ .. |+|+++
T Consensus 286 ~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 286 REDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred hhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 357888999999999886434678999999999999998873 54 999864
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, |
| >cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-40 Score=306.38 Aligned_cols=316 Identities=26% Similarity=0.393 Sum_probs=261.9
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 81 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd 81 (371)
|||+++.+++. +++++.|.|++++++|+||+.++++|++|+....|..+ +|.++|||++|+|+++|++ +++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~G~ 73 (319)
T cd08242 1 MKALVLDGGLD-LRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELVGK 73 (319)
T ss_pred CeeEEEeCCCc-EEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCCCC
Confidence 79999998764 99999999999999999999999999999998888654 5778999999999999997 67999
Q ss_pred EEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCc
Q 017431 82 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 161 (371)
Q Consensus 82 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~ 161 (371)
+|...+..+|+.|.+|+.+.++.|..... .+....+ |+|++|++++.+.++++|++++.
T Consensus 74 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~------------------g~~~~~~~v~~~~~~~lP~~~~~ 132 (319)
T cd08242 74 RVVGEINIACGRCEYCRRGLYTHCPNRTV---LGIVDRD------------------GAFAEYLTLPLENLHVVPDLVPD 132 (319)
T ss_pred eEEECCCcCCCCChhhhCcCcccCCCCcc---cCccCCC------------------CceEEEEEechHHeEECcCCCCH
Confidence 99999999999999999999988886442 2211123 39999999999999999999999
Q ss_pred chhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCC
Q 017431 162 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241 (371)
Q Consensus 162 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~ 241 (371)
++++.+ ..+.++|.+ .+..+++++++|||+|+|.+|++++|+|+.+|+ +|+++++++++.++++++|++.++++.+
T Consensus 133 ~~aa~~-~~~~~~~~~-~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~- 208 (319)
T cd08242 133 EQAVFA-EPLAAALEI-LEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPDEA- 208 (319)
T ss_pred HHhhhh-hHHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCccc-
Confidence 888764 345566654 477889999999999989999999999999999 6999999999999999999988776643
Q ss_pred CchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeeecCCCcc
Q 017431 242 DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGFKS 319 (371)
Q Consensus 242 ~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~ 319 (371)
. +++ ++|+++||+|+...+..+++++.++ |+++..+.... ...++...+ .++.++.+....
T Consensus 209 -~---------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~---- 271 (319)
T cd08242 209 -E---------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTYAG--PASFDLTKAVVNEITLVGSRCG---- 271 (319)
T ss_pred -c---------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCC--CCccCHHHheecceEEEEEecc----
Confidence 1 334 8999999999877789999999996 99998765432 223333332 346777766432
Q ss_pred cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEe
Q 017431 320 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 368 (371)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~ 368 (371)
.++.+++++.++++++.+.+++.|+++++++|++.+.++...|++|+
T Consensus 272 --~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~vi~ 318 (319)
T cd08242 272 --PFAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPGALKVLLR 318 (319)
T ss_pred --cHHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCCceEEEeC
Confidence 37889999999998766678899999999999999987765699886
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta |
| >cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-40 Score=308.10 Aligned_cols=335 Identities=30% Similarity=0.473 Sum_probs=277.6
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 81 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd 81 (371)
||++++.+++. +.+++.+.|++.+++|+|++.++++|+.|+..+.|.+.....|.++|+|++|+|+++|++++.+++||
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd 79 (343)
T cd08235 1 MKAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGD 79 (343)
T ss_pred CeEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCC
Confidence 79999999876 99999999999999999999999999999999888764334577899999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccc-----eEecC
Q 017431 82 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS-----VAKID 156 (371)
Q Consensus 82 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~-----v~~lP 156 (371)
+|++.++.+|++|.+|..++.+.|..... .|.. ..|+|++|+.++.+. ++++|
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------------------~~g~~~~~v~v~~~~~~~~~~~~lP 137 (343)
T cd08235 80 RVFVAPHVPCGECHYCLRGNENMCPNYKK---FGNL-------------------YDGGFAEYVRVPAWAVKRGGVLKLP 137 (343)
T ss_pred EEEEccCCCCCCChHHHCcCcccCCCcce---eccC-------------------CCCcceeeEEecccccccccEEECC
Confidence 99999999999999999999888875432 1111 124999999999998 99999
Q ss_pred CCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEe
Q 017431 157 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 236 (371)
Q Consensus 157 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi 236 (371)
+++++.+|+.+ .++.+||+++. ..++++|++|||+|+|.+|++++|+|+.+|++.|+++++++++.+.++++|+++++
T Consensus 138 ~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~ 215 (343)
T cd08235 138 DNVSFEEAALV-EPLACCINAQR-KAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTI 215 (343)
T ss_pred CCCCHHHHHhh-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEe
Confidence 99999999876 68889999885 45899999999998899999999999999994488888999999988999998888
Q ss_pred cCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeec
Q 017431 237 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAF 314 (371)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~ 314 (371)
++++ .++.+.+.+.+++ ++|+++||+++...+..++++++++ |+++.+|.........++...+. ++..+.+...
T Consensus 216 ~~~~--~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 292 (343)
T cd08235 216 DAAE--EDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITGSYA 292 (343)
T ss_pred cCCc--cCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEEEec
Confidence 8876 6677788888777 8999999999866789999999996 99999986433222222222222 3556655443
Q ss_pred CCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 315 GGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
. ..+.++.+++++.++.+.+.+.+..+|+++++++|++.+.+++ . |+|++
T Consensus 293 ~---~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 293 A---SPEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred C---ChhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence 2 2356888999999998875445678899999999999999888 6 88863
|
Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i |
| >cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-40 Score=306.80 Aligned_cols=333 Identities=31% Similarity=0.474 Sum_probs=280.5
Q ss_pred cceEEeecCCCC-eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCC-CCCCCcccccceeEEEEEeCCCCCCCCC
Q 017431 2 CKAAVAWEPNKP-LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVESVGEGVTEVQP 79 (371)
Q Consensus 2 ~~a~~~~~~~~~-~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~-~~~~p~v~G~e~~G~V~~~G~~v~~~~~ 79 (371)
||++++..++++ +.+.+.|.|.+.+++|+|++.++++|+.|+....|.++ ...+|.++|+|++|+|+++|++++.+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~ 80 (338)
T cd08254 1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKV 80 (338)
T ss_pred CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCC
Confidence 799999999998 68888899999999999999999999999999888765 2356788999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCC
Q 017431 80 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 159 (371)
Q Consensus 80 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~ 159 (371)
||+|++.+..+|+.|.+|+.++.++|..... .|+. .+ |+|++|+.++.+.++++|+++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~~~~~~~~~lp~~~ 138 (338)
T cd08254 81 GDRVAVPAVIPCGACALCRRGRGNLCLNQGM---PGLG-ID------------------GGFAEYIVVPARALVPVPDGV 138 (338)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCCCCCc---cccc-cC------------------CcceeeEEechHHeEECCCCC
Confidence 9999999999999999999999999965432 1222 23 399999999999999999999
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCC
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 239 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~ 239 (371)
++.+++.++.++.+||+++.....++++++|||.|+|.+|++++++|+.+|+ +|+++++++++.+.++++|++++++..
T Consensus 139 ~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~ 217 (338)
T cd08254 139 PFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSL 217 (338)
T ss_pred CHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCC
Confidence 9999999999999999998888889999999999889999999999999999 799999999999999999998888766
Q ss_pred CCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecCCC
Q 017431 240 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGF 317 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~ 317 (371)
+ ..+.+.+ +.+.+ ++|+++||+|....++.++++|+++ |+++.+|.... ...++...+. ++.++.++...
T Consensus 218 ~--~~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~-- 289 (338)
T cd08254 218 D--DSPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRD--KLTVDLSDLIARELRIIGSFGG-- 289 (338)
T ss_pred C--cCHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECCCCC--CCccCHHHHhhCccEEEEeccC--
Confidence 5 4455555 55555 8999999999877899999999996 99999986432 2223323333 36666665432
Q ss_pred cccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 318 KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
....+..+++++.++.+++. .+.+++++++++++.+.+++.. |+|+++
T Consensus 290 -~~~~~~~~~~ll~~~~l~~~---~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 290 -TPEDLPEVLDLIAKGKLDPQ---VETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred -CHHHHHHHHHHHHcCCCccc---ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 23578889999999988754 5789999999999999988876 998864
|
This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio |
| >TIGR01751 crot-CoA-red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-40 Score=313.16 Aligned_cols=340 Identities=21% Similarity=0.306 Sum_probs=274.8
Q ss_pred CcceEEeec--CCCC---eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCC----------CCCCC-ccccccee
Q 017431 1 MCKAAVAWE--PNKP---LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP----------EGLFP-CILGHEAA 64 (371)
Q Consensus 1 ~~~a~~~~~--~~~~---~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~----------~~~~p-~v~G~e~~ 64 (371)
+|||+++.. +++| +++.++|.|.+.+++|+|++.++++|++|++...+... ....| .++|||++
T Consensus 7 ~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~e~~ 86 (398)
T TIGR01751 7 TMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGSDAS 86 (398)
T ss_pred hhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecccceE
Confidence 599999965 5654 99999999999999999999999999999877655321 11123 37999999
Q ss_pred EEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeee
Q 017431 65 GIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQY 144 (371)
Q Consensus 65 G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~ 144 (371)
|+|+++|++++.+++||+|++.+...|++|.+|+.+....|..... +|.. .+.|+|++|
T Consensus 87 G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~------------------~~~g~~ae~ 145 (398)
T TIGR01751 87 GVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRI---WGYE------------------TNFGSFAEF 145 (398)
T ss_pred EEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCcccccccccc---cccc------------------CCCccceEE
Confidence 9999999999999999999999999999999999999999964431 2211 112499999
Q ss_pred EEecccceEecCCCCCcchhhhccccchhhhhhhhh--cCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 145 TVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN--TAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 145 ~~v~~~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
+.++.+.++++|+++++++++.+.+.+.+||+++.. ..++.+|++|||+|+ |.+|++++++|+++|+ +++++++++
T Consensus 146 ~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~~~~~ 224 (398)
T TIGR01751 146 ALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAVVSSP 224 (398)
T ss_pred EEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEEcCCH
Confidence 999999999999999999999999999999998755 577899999999998 9999999999999999 677777888
Q ss_pred hhHHHHHhcCCcEEecCCCCC--------------------chHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccC
Q 017431 222 KKFDRAKNFGVTEFVNPKDHD--------------------KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKG 280 (371)
Q Consensus 222 ~~~~~~~~~g~~~vi~~~~~~--------------------~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~ 280 (371)
++.+.++++|++.++++++.+ ..+.+.+.+++++ ++|++|||+|+ ..+..++++++++
T Consensus 225 ~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~-~~~~~~~~~l~~~ 303 (398)
T TIGR01751 225 EKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGR-ATFPTSVFVCRRG 303 (398)
T ss_pred HHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcH-HHHHHHHHhhccC
Confidence 899999999999999865421 1355667778877 89999999997 5689999999996
Q ss_pred CceEEEEccCCCCCcccccchhe-eeceEEEeeecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhC
Q 017431 281 WGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHG 359 (371)
Q Consensus 281 ~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~ 359 (371)
|+++.+|.... ...+++...+ ..+.++.++.+... .+++.+++++.++.+.. .++++++++++++|++.+.+
T Consensus 304 -G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~l~~--~~~~~~~l~~~~~a~~~~~~ 376 (398)
T TIGR01751 304 -GMVVICGGTTG-YNHDYDNRYLWMRQKRIQGSHFANL---REAWEANRLVAKGRIDP--TLSKVYPLEEIGQAHQDVHR 376 (398)
T ss_pred -CEEEEEccccC-CCCCcCHHHHhhcccEEEccccCcH---HHHHHHHHHHHCCCccc--ceeeEEcHHHHHHHHHHHHc
Confidence 99999987532 1123332222 23556666544322 35778999999988763 46799999999999999988
Q ss_pred CCee-EEEEecC
Q 017431 360 GDCL-RCVLKMQ 370 (371)
Q Consensus 360 ~~~~-kvvl~~~ 370 (371)
++.. |+|+++.
T Consensus 377 ~~~~gkvvv~~~ 388 (398)
T TIGR01751 377 NHHQGNVAVLVL 388 (398)
T ss_pred CCCCceEEEEeC
Confidence 8776 9998874
|
The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. |
| >cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=310.53 Aligned_cols=337 Identities=25% Similarity=0.373 Sum_probs=269.5
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCC------C-CCCCCcccccceeEEEEEeCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD------P-EGLFPCILGHEAAGIVESVGEGV 74 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~------~-~~~~p~v~G~e~~G~V~~~G~~v 74 (371)
+.+.++.. . +++++++|.|++.+++|+|++.++++|++|++.+.+.. + ..++|.++|||++|+|+++|+++
T Consensus 29 ~~~~~~~~-~-~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v 106 (384)
T cd08265 29 LGSKVWRY-P-ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNV 106 (384)
T ss_pred ceeEEEeC-C-CEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCC
Confidence 34444443 2 49999999999999999999999999999998876321 1 13467899999999999999999
Q ss_pred CCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEe
Q 017431 75 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK 154 (371)
Q Consensus 75 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~ 154 (371)
+.|++||+|++.+..+|+.|..|..+..+.|..... .|+. .+ |+|++|+.++.+.+++
T Consensus 107 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~-~~------------------g~~~~~v~v~~~~~~~ 164 (384)
T cd08265 107 KNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKE---LGFS-AD------------------GAFAEYIAVNARYAWE 164 (384)
T ss_pred CCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcce---eeec-CC------------------CcceeeEEechHHeEE
Confidence 999999999999999999999999999999986442 2322 23 3999999999999999
Q ss_pred cCCCCC------cchhhhccccchhhhhhhhhc-CCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 017431 155 IDPQAP------LDKVCLLGCGVPTGLGAVWNT-AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 227 (371)
Q Consensus 155 lP~~~~------~~~aa~~~~~~~ta~~~l~~~-~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~ 227 (371)
+|++++ ..++++++.++++||+++... .++++|++|||+|+|++|++++++|+.+|+.+|+++++++++.+++
T Consensus 165 lP~~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~ 244 (384)
T cd08265 165 INELREIYSEDKAFEAGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLA 244 (384)
T ss_pred CCccccccccCCCHHHhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence 998642 233666777889999998666 6899999999998899999999999999997799999989999999
Q ss_pred HhcCCcEEecCCCC-CchHHHHHHhhcCC-CccEEEEccCCH-HHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-
Q 017431 228 KNFGVTEFVNPKDH-DKPIQQVLVDLTDG-GVDYSFECIGNV-SVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL- 303 (371)
Q Consensus 228 ~~~g~~~vi~~~~~-~~~~~~~~~~~~~g-g~dvvid~~g~~-~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~- 303 (371)
+++|+++++++++. ..++.+.+.+++++ ++|+++|++|++ ..+..++++++++ |+++.+|.... ..++....+
T Consensus 245 ~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~ 321 (384)
T cd08265 245 KEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-GKIVYIGRAAT--TVPLHLEVLQ 321 (384)
T ss_pred HHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-CEEEEECCCCC--CCcccHHHHh
Confidence 99999998887642 12677788888887 999999999973 4689999999996 99999986432 223222222
Q ss_pred eeceEEEeeecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEE
Q 017431 304 VTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVL 367 (371)
Q Consensus 304 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl 367 (371)
.+..++.+.... .....+.++++++.++.+++.+++++.|+++++++|++.+.++...|+|+
T Consensus 322 ~~~~~l~~~~~~--~~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv 383 (384)
T cd08265 322 VRRAQIVGAQGH--SGHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASERTDGKITI 383 (384)
T ss_pred hCceEEEEeecc--CCcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEe
Confidence 225566665421 12246889999999999876656778999999999999977665457775
|
This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi |
| >PRK13771 putative alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-40 Score=306.62 Aligned_cols=329 Identities=25% Similarity=0.397 Sum_probs=274.7
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 81 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd 81 (371)
|||+++.++++++++++.|.|.+.+++|+|++.++++|++|+....|.++..++|.++|||++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~ 80 (334)
T PRK13771 1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGD 80 (334)
T ss_pred CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCC
Confidence 79999999998899999999999999999999999999999998888776556788999999999999999998999999
Q ss_pred EEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCc
Q 017431 82 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 161 (371)
Q Consensus 82 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~ 161 (371)
+|++.+..+|+.|.+|..+..+.|..... +|.. .+ |+|++|+.++.+.++++|+++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~~~~~~~~~lp~~~~~ 138 (334)
T PRK13771 81 RVASLLYAPDGTCEYCRSGEEAYCKNRLG---YGEE-LD------------------GFFAEYAKVKVTSLVKVPPNVSD 138 (334)
T ss_pred EEEECCCCCCcCChhhcCCCcccCccccc---cccc-cC------------------ceeeeeeecchhceEECCCCCCH
Confidence 99999888999999999999999976542 2221 23 39999999999999999999999
Q ss_pred chhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 162 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 162 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
.+++.+++.+.+||+++... .+.++++|||+|+ |.+|++++++|+.+|+ +++++++++++.+.++++ ++++++..
T Consensus 139 ~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~- 214 (334)
T PRK13771 139 EGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS- 214 (334)
T ss_pred HHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch-
Confidence 99999999999999988665 8999999999988 9999999999999999 788888989999988888 66666543
Q ss_pred CCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCc--ccccchheeeceEEEeeecCCCc
Q 017431 241 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE--ISTRPFQLVTGRVWKGTAFGGFK 318 (371)
Q Consensus 241 ~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~ 318 (371)
.+.+.+.+. +++|+++||+|+. .+..++++++++ |+++.+|....... ..+... +.++.++.+... .
T Consensus 215 ---~~~~~v~~~--~~~d~~ld~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~ 283 (334)
T PRK13771 215 ---KFSEEVKKI--GGADIVIETVGTP-TLEESLRSLNMG-GKIIQIGNVDPSPTYSLRLGYI-ILKDIEIIGHIS---A 283 (334)
T ss_pred ---hHHHHHHhc--CCCcEEEEcCChH-HHHHHHHHHhcC-CEEEEEeccCCCCCcccCHHHH-HhcccEEEEecC---C
Confidence 344555554 3799999999984 589999999996 99999987533221 222222 344677776532 2
Q ss_pred ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 319 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
.+++++.+++++.++.++ +.+.+.|+++++++|++.+.+++.. |+++..
T Consensus 284 ~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 284 TKRDVEEALKLVAEGKIK--PVIGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred CHHHHHHHHHHHHcCCCc--ceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 346788999999999875 3467899999999999999887665 988864
|
|
| >cd05285 sorbitol_DH Sorbitol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=304.63 Aligned_cols=331 Identities=31% Similarity=0.481 Sum_probs=267.9
Q ss_pred eEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCC-CCC--CCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 4 AAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK-DPE--GLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 4 a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~-~~~--~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
|+++.++.. +++++.|.|.+.+++|+|+|.++++|+.|++.+.+. .+. ..+|.++|+|++|+|+++|++++.+++|
T Consensus 1 ~~~~~~~~~-~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (343)
T cd05285 1 AAVLHGPGD-LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVG 79 (343)
T ss_pred CceEecCCc-eeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCC
Confidence 467778854 999999999999999999999999999998876422 211 1357789999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|+|++.+..+|+.|++|+.+.++.|...... +.... .|+|++|++++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~------------------~g~~~~~~~v~~~~~~~lP~~~~ 138 (343)
T cd05285 80 DRVAIEPGVPCRTCEFCKSGRYNLCPDMRFA---ATPPV------------------DGTLCRYVNHPADFCHKLPDNVS 138 (343)
T ss_pred CEEEEccccCCCCChhHhCcCcccCcCcccc---ccccC------------------CCceeeeEEecHHHcEECcCCCC
Confidence 9999999999999999999999999643210 00001 24999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
+++|+.+ .++.+||+++ ....+++|++|||.|+|.+|++++|+|+.+|+++|+++++++++.++++++|+++++++++
T Consensus 139 ~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~ 216 (343)
T cd05285 139 LEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT 216 (343)
T ss_pred HHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc
Confidence 9999877 5788899886 8899999999999988999999999999999955899989999999999999999988766
Q ss_pred CCch---HHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchh-eeeceEEEeeecC
Q 017431 241 HDKP---IQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFG 315 (371)
Q Consensus 241 ~~~~---~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~ 315 (371)
.. +.+.+.+.+++ ++|+++||+|+...+...+++++++ |+++.+|..... ..++... ..++..+.++...
T Consensus 217 --~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~ 291 (343)
T cd05285 217 --EDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGKPE--VTLPLSAASLREIDIRGVFRY 291 (343)
T ss_pred --ccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCC--CccCHHHHhhCCcEEEEeccC
Confidence 34 36677777777 8999999999865789999999996 999999864322 1222112 2235555554322
Q ss_pred CCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCe--eEEEE
Q 017431 316 GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDC--LRCVL 367 (371)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~--~kvvl 367 (371)
.+.++.+++++.++.+.+.+.+.++|+++++.+|++.+.+++. +|++|
T Consensus 292 ----~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 292 ----ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred ----hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 2568889999999987655556789999999999999988753 59987
|
Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=303.52 Aligned_cols=332 Identities=26% Similarity=0.418 Sum_probs=270.9
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 81 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd 81 (371)
|||+++.++++...+++.|.|++.++||+|||.++++|++|++.+.|..+. ..|.++|||++|+|+++|++++.|++||
T Consensus 1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (338)
T PRK09422 1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLKVGD 79 (338)
T ss_pred CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCCCCC
Confidence 899999998885449999999999999999999999999999988886543 2467899999999999999999999999
Q ss_pred EEeecC-CCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 82 HVIPCY-QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 82 ~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
+|++.+ ..+|+.|.+|..+..+.|..... .|.. ++ |+|++|+.++.+.++++|++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~v~~~~~~~~p~~~~ 137 (338)
T PRK09422 80 RVSIAWFFEGCGHCEYCTTGRETLCRSVKN---AGYT-VD------------------GGMAEQCIVTADYAVKVPEGLD 137 (338)
T ss_pred EEEEccCCCCCCCChhhcCCCcccCCCccc---cCcc-cc------------------CcceeEEEEchHHeEeCCCCCC
Confidence 998755 45699999999999999986542 2222 23 3999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEEcCChhhHHHHHhcCCcEEecCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKA-AGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 239 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~-~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~ 239 (371)
+.+++.+++.+.|||+++ ...++++|++|||+|+|++|++++++|+. +|+ +|+++++++++.+.++++|++.++++.
T Consensus 138 ~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~ 215 (338)
T PRK09422 138 PAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSK 215 (338)
T ss_pred HHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEeccc
Confidence 999999999999999987 77889999999999999999999999998 499 899999999999999999998888864
Q ss_pred CCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecCCCc
Q 017431 240 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFK 318 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~ 318 (371)
. ..++.+.+++.++ ++|+++.+.++...+..++++++.+ |+++.+|.... ..+++...+. ++.++.++...
T Consensus 216 ~-~~~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~--- 287 (338)
T PRK09422 216 R-VEDVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPPE--SMDLSIPRLVLDGIEVVGSLVG--- 287 (338)
T ss_pred c-cccHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCCC--CceecHHHHhhcCcEEEEecCC---
Confidence 3 1345666776665 6895555555557799999999996 99999986432 2233322222 35566655432
Q ss_pred ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 319 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
..++++.+++++.++.++. .+ +.++++++++|++.+.+++.. |+++.+
T Consensus 288 ~~~~~~~~~~l~~~g~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 336 (338)
T PRK09422 288 TRQDLEEAFQFGAEGKVVP--KV-QLRPLEDINDIFDEMEQGKIQGRMVIDF 336 (338)
T ss_pred CHHHHHHHHHHHHhCCCCc--cE-EEEcHHHHHHHHHHHHcCCccceEEEec
Confidence 2357888999999998753 34 468999999999999988776 988865
|
|
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=303.74 Aligned_cols=309 Identities=22% Similarity=0.294 Sum_probs=258.1
Q ss_pred cceEEeecCCCC---eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCC-CCCCCcccccceeEEEEEeCCCCCCC
Q 017431 2 CKAAVAWEPNKP---LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVESVGEGVTEV 77 (371)
Q Consensus 2 ~~a~~~~~~~~~---~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~-~~~~p~v~G~e~~G~V~~~G~~v~~~ 77 (371)
|||+++.+++.| ++++++|.|.+.++||+|+|.++++|+.|++.+.|.++ ...+|.++|||++|+|+++|++++.+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 80 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL 80 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence 799999988764 88999999999999999999999999999999988765 23568899999999999999999999
Q ss_pred CCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCC
Q 017431 78 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 157 (371)
Q Consensus 78 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~ 157 (371)
++||+|++.+ .+ |+|++|+.++...++++|+
T Consensus 81 ~~Gd~V~~~~-------------------------------~~------------------g~~~~~~~~~~~~~~~ip~ 111 (324)
T cd08292 81 QVGQRVAVAP-------------------------------VH------------------GTWAEYFVAPADGLVPLPD 111 (324)
T ss_pred CCCCEEEecc-------------------------------CC------------------CcceeEEEEchHHeEECCC
Confidence 9999998542 12 3999999999999999999
Q ss_pred CCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEe
Q 017431 158 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 236 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi 236 (371)
++++++++.+++.+.+||+++ ...++++|++|||+|+ |.+|++++|+|+++|+ +++++.+++++.+.++++|+++++
T Consensus 112 ~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (324)
T cd08292 112 GISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVV 189 (324)
T ss_pred CCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEE
Confidence 999999999998999999986 5588999999999987 9999999999999999 788888888888888889998888
Q ss_pred cCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchh-eeeceEEEeeec
Q 017431 237 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAF 314 (371)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~ 314 (371)
++.+ .++.+.+.+.+++ ++|++|||+|+. ....++++++++ |+++.+|... ....+++... +.++.++.++..
T Consensus 190 ~~~~--~~~~~~i~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~ 264 (324)
T cd08292 190 STEQ--PGWQDKVREAAGGAPISVALDSVGGK-LAGELLSLLGEG-GTLVSFGSMS-GEPMQISSGDLIFKQATVRGFWG 264 (324)
T ss_pred cCCC--chHHHHHHHHhCCCCCcEEEECCCCh-hHHHHHHhhcCC-cEEEEEecCC-CCCCcCCHHHHhhCCCEEEEEEc
Confidence 8766 6778888898888 999999999994 588999999996 9999998742 2233333322 234777777765
Q ss_pred CCCc-------ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 315 GGFK-------SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 315 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
..+. ....+..+++++.++.+++. +.++|+++++++|++.+.++... |++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 265 GRWSQEMSVEYRKRMIAELLTLALKGQLLLP--VEAVFDLGDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred HHhhhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence 4321 12357788999999988753 46889999999999999876665 88864
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=304.49 Aligned_cols=334 Identities=28% Similarity=0.401 Sum_probs=274.0
Q ss_pred ceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 017431 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDH 82 (371)
Q Consensus 3 ~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd~ 82 (371)
|+++.+.++..+++++++.|++.++||+||+.++++|++|++.+.|......+|.++|||++|+|+++|++++.+++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (337)
T cd05283 1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDR 80 (337)
T ss_pred CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCE
Confidence 57888888888999999999999999999999999999999999887755567889999999999999999999999999
Q ss_pred Ee-ecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCc
Q 017431 83 VI-PCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 161 (371)
Q Consensus 83 V~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~ 161 (371)
|+ ......|++|.+|..+..+.|...... +.|.. .-.....|+|++|+.++.+.++++|+++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------------~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~ 145 (337)
T cd05283 81 VGVGCQVDSCGTCEQCKSGEEQYCPKGVVT-YNGKY--------------PDGTITQGGYADHIVVDERFVFKIPEGLDS 145 (337)
T ss_pred EEEecCCCCCCCCccccCCchhcCcchhhc-ccccc--------------cCCCcCCCcceeEEEechhheEECCCCCCH
Confidence 97 445568999999999999999764421 00100 000122359999999999999999999999
Q ss_pred chhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCC
Q 017431 162 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241 (371)
Q Consensus 162 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~ 241 (371)
++++.+++.+.+||+++.. .++++|++|+|.|+|.+|++++++|+.+|+ +++.+++++++.++++++|++.+++...
T Consensus 146 ~~aa~l~~~~~ta~~~~~~-~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~- 222 (337)
T cd05283 146 AAAAPLLCAGITVYSPLKR-NGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKD- 222 (337)
T ss_pred HHhhhhhhHHHHHHHHHHh-cCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcc-
Confidence 9999999999999998744 468999999998889999999999999999 8999999999999999999988887654
Q ss_pred CchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchh-eeeceEEEeeecCCCccc
Q 017431 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFGGFKSR 320 (371)
Q Consensus 242 ~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~ 320 (371)
.++.. . .++++|+++||++.......++++++++ |+++.+|...... .++... +.++.++.++.... .
T Consensus 223 -~~~~~---~-~~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~~~~~~i~~~~~~~---~ 291 (337)
T cd05283 223 -PEAMK---K-AAGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPEEPL--PVPPFPLIFGRKSVAGSLIGG---R 291 (337)
T ss_pred -hhhhh---h-ccCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEeccCCCC--ccCHHHHhcCceEEEEecccC---H
Confidence 22221 1 2348999999999865689999999996 9999998753221 344444 33588888876643 3
Q ss_pred CcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 321 SQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
++++.+++++.++++++ . .+.|+++++++||+.+.+++.. |+|++
T Consensus 292 ~~~~~~~~~~~~~~l~~--~-~~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 292 KETQEMLDFAAEHGIKP--W-VEVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred HHHHHHHHHHHhCCCcc--c-eEEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 57888999999998754 3 4789999999999999998876 98874
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic |
| >cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-39 Score=302.50 Aligned_cols=336 Identities=29% Similarity=0.465 Sum_probs=275.1
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 81 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd 81 (371)
|||+++.+++. +++++.|+|++.++||+|++.++++|+.|+....+.+. ...|.++|+|++|+|+++|++++.+++||
T Consensus 1 ~~a~~~~~~~~-l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~-~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd 78 (343)
T cd08236 1 MKALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA-YHPPLVLGHEFSGTVEEVGSGVDDLAVGD 78 (343)
T ss_pred CeeEEEecCCc-eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC-CCCCcccCcceEEEEEEECCCCCcCCCCC
Confidence 79999999876 99999999999999999999999999999988877652 24578899999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCc
Q 017431 82 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 161 (371)
Q Consensus 82 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~ 161 (371)
+|+..+...|+.|.+|..+..+.|+.... .|.. . .|+|++|++++.+.++++|+++++
T Consensus 79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~------------------~g~~~~~~~~~~~~~~~lP~~~~~ 136 (343)
T cd08236 79 RVAVNPLLPCGKCEYCKKGEYSLCSNYDY---IGSR-R------------------DGAFAEYVSVPARNLIKIPDHVDY 136 (343)
T ss_pred EEEEcCCCCCCCChhHHCcChhhCCCcce---Eecc-c------------------CCcccceEEechHHeEECcCCCCH
Confidence 99999888999999999999999986532 2211 2 249999999999999999999999
Q ss_pred chhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCC
Q 017431 162 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241 (371)
Q Consensus 162 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~ 241 (371)
++|+.+ ..+++||+++. ...+.++++|||+|+|.+|.+++|+|+++|+++|+++++++++.++++++|++.++++++
T Consensus 137 ~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~- 213 (343)
T cd08236 137 EEAAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE- 213 (343)
T ss_pred HHHHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc-
Confidence 999887 57889999885 778999999999988999999999999999955999988888899999999988888766
Q ss_pred CchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccch--heeeceEEEeeecCCC-
Q 017431 242 DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF--QLVTGRVWKGTAFGGF- 317 (371)
Q Consensus 242 ~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~- 317 (371)
.. ...+.+..++ ++|+++||+|+...+..++++|+++ |+++.+|.......+..... .+.++.++.++.+...
T Consensus 214 -~~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (343)
T cd08236 214 -ED-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSA 290 (343)
T ss_pred -cc-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeecccc
Confidence 34 5666677776 8999999998877789999999996 99999986542211221111 1234667776654321
Q ss_pred -cccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhC-CCee-EEEE
Q 017431 318 -KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHG-GDCL-RCVL 367 (371)
Q Consensus 318 -~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~-~~~~-kvvl 367 (371)
...+.++.+++++.++.+.+.+.+.+.+++++++++++.+.+ +... |+|+
T Consensus 291 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 291 PFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred ccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 113567888999999987644446789999999999999998 5555 8764
|
This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast |
| >cd05281 TDH Threonine dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-39 Score=301.77 Aligned_cols=336 Identities=30% Similarity=0.453 Sum_probs=270.6
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCC---CCCCCCcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD---PEGLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~---~~~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
||++++..++..+++.+.|.|.|.+++++||+.++++|+.|+..+.+.. .....|.++|+|++|+|+++|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~ 80 (341)
T cd05281 1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK 80 (341)
T ss_pred CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence 7999999888779999999999999999999999999999988755432 1224567899999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||+|+..+..+|+.|..|..+.++.|.... ..|.. +.|+|++|++++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-------------------~~g~~~~~v~v~~~~~~~lP~~ 138 (341)
T cd05281 81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNTK---ILGVD-------------------TDGCFAEYVVVPEENLWKNDKD 138 (341)
T ss_pred CCCEEEECCccCCCCChHHHCcCcccCcccc---eEecc-------------------CCCcceEEEEechHHcEECcCC
Confidence 9999999999999999999999999996432 22211 2349999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
++++ +++++.++.++++++. ....+|++|||.|+|.+|++++|+|+.+|+.+|+++++++++.++++++|++++++.
T Consensus 139 ~~~~-~a~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~ 215 (341)
T cd05281 139 IPPE-IASIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINP 215 (341)
T ss_pred CCHH-HhhhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCc
Confidence 9984 4456667888887764 455789999999889999999999999998678888888899999999999888877
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCC
Q 017431 239 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF 317 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 317 (371)
++ .++. .+.+.+++ ++|++|||+|+......++++|+++ |+++.+|.........+....+.++..+.+....
T Consensus 216 ~~--~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 289 (341)
T cd05281 216 RE--EDVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGR-- 289 (341)
T ss_pred cc--ccHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCCCcccccchhhhccceEEEEEecC--
Confidence 65 4566 67777776 9999999999877789999999996 9999998643222222222123345666655421
Q ss_pred cccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEe
Q 017431 318 KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 368 (371)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~ 368 (371)
...+.+..+++++.++.+.+.+.+.+.++++++++|++.+.+++..|+|++
T Consensus 290 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~gk~vv~ 340 (341)
T cd05281 290 KMFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGKCGKVVLY 340 (341)
T ss_pred CcchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCCCceEEec
Confidence 122467789999999998766667788999999999999998883399876
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. |
| >cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-39 Score=299.69 Aligned_cols=334 Identities=31% Similarity=0.497 Sum_probs=278.3
Q ss_pred cceEEeecCC-CCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 017431 2 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQP 79 (371)
Q Consensus 2 ~~a~~~~~~~-~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~~~ 79 (371)
|||+++.+++ ..+++++.+.|.+.+++|+||+.++++|++|+..+.|.++. ...|.++|+|++|+|+++|++++.+++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~ 80 (341)
T cd08297 1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKV 80 (341)
T ss_pred CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCC
Confidence 8999999887 34999999999999999999999999999999988887643 245668999999999999999999999
Q ss_pred CCEEeecC-CCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 80 GDHVIPCY-QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 80 Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
||+|++.+ ..+|+.|.+|..+..+.|..... .|+. . .|++++|+.++.+.++++|++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~------------------~g~~~s~~~~~~~~~~~lp~~ 138 (341)
T cd08297 81 GDRVGVKWLYDACGKCEYCRTGDETLCPNQKN---SGYT-V------------------DGTFAEYAIADARYVTPIPDG 138 (341)
T ss_pred CCEEEEecCCCCCCCCccccCCCcccCCCccc---cccc-c------------------CCcceeEEEeccccEEECCCC
Confidence 99998776 56799999999999999965432 1211 1 249999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
+++.+++.++..+.|||+++.. .+++++++|||+|+ +.+|++++++|+++|+ +|+++++++++.+.++++|++.+++
T Consensus 139 ~~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~ 216 (341)
T cd08297 139 LSFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVD 216 (341)
T ss_pred CCHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEc
Confidence 9999999999999999998755 58999999999988 6799999999999999 8999999999999999999999988
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeeecC
Q 017431 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFG 315 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~ 315 (371)
+++ .++.+.+.+.+++ ++|+++|+.++...+..++++++++ |+++.+|... ....+++...+ .++.++.+....
T Consensus 217 ~~~--~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 292 (341)
T cd08297 217 FKK--SDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPP-GGFIPLDPFDLVLRGITIVGSLVG 292 (341)
T ss_pred CCC--ccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecCCC-CCCCCCCHHHHHhcccEEEEeccC
Confidence 776 5677788888876 8999999888778899999999996 9999998643 22224443332 236666664432
Q ss_pred CCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 316 GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
..++++.+++++.++.+++ .+ +.|+++++++|++.+.++... |++++|
T Consensus 293 ---~~~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 293 ---TRQDLQEALEFAARGKVKP--HI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred ---CHHHHHHHHHHHHcCCCcc--ee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 1357888999999998754 33 679999999999999988776 999875
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha |
| >cd08232 idonate-5-DH L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-39 Score=300.34 Aligned_cols=331 Identities=27% Similarity=0.405 Sum_probs=263.5
Q ss_pred EeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCcccccccc-CCCCC--CCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 017431 6 VAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWS-GKDPE--GLFPCILGHEAAGIVESVGEGVTEVQPGDH 82 (371)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~-g~~~~--~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd~ 82 (371)
++++.+. +++++.|+|.+.+++|+||+.++++|++|+..+. |..+. ...|.++|+|++|+|+++|++++.|++||+
T Consensus 2 ~~~~~~~-~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~ 80 (339)
T cd08232 2 VIHAAGD-LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQR 80 (339)
T ss_pred eeccCCc-eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCE
Confidence 4556655 9999999999999999999999999999987763 33321 135778999999999999999999999999
Q ss_pred EeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCcc
Q 017431 83 VIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLD 162 (371)
Q Consensus 83 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~~ 162 (371)
|++.+..+|+.|.+|..|+++.|..... ++...++ ....|+|++|+.++.+.++++|++++++
T Consensus 81 V~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~--------------~~~~g~~~~~v~v~~~~~~~iP~~~~~~ 143 (339)
T cd08232 81 VAVNPSRPCGTCDYCRAGRPNLCLNMRF---LGSAMRF--------------PHVQGGFREYLVVDASQCVPLPDGLSLR 143 (339)
T ss_pred EEEccCCcCCCChHHhCcCcccCccccc---eeecccc--------------CCCCCceeeEEEechHHeEECcCCCCHH
Confidence 9999999999999999999999987532 1110000 0012499999999999999999999999
Q ss_pred hhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCC
Q 017431 163 KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD 242 (371)
Q Consensus 163 ~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~ 242 (371)
+|+. ..++++||+++.....+ ++++|||.|+|.+|++++|+|+.+|+++++++++++++.++++++|+++++++++
T Consensus 144 ~aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~-- 219 (339)
T cd08232 144 RAAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLAR-- 219 (339)
T ss_pred Hhhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCc--
Confidence 8876 56888999988666666 9999999988999999999999999877899988898889999999988888765
Q ss_pred chHHHHHHhhc-CC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchh-eeeceEEEeeecCCCcc
Q 017431 243 KPIQQVLVDLT-DG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFGGFKS 319 (371)
Q Consensus 243 ~~~~~~~~~~~-~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~ 319 (371)
..+ .+.. .. ++|+++|+.++...++..+++|+++ |+++.+|.... ....+... +.++.++.+... .
T Consensus 220 ~~~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~----~ 288 (339)
T cd08232 220 DPL----AAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLGG--PVPLPLNALVAKELDLRGSFR----F 288 (339)
T ss_pred hhh----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCC--CccCcHHHHhhcceEEEEEec----C
Confidence 222 2222 22 6999999999766789999999996 99999986431 22222222 234666666542 2
Q ss_pred cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 320 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
.+.++.+++++.++.+++.+.+.++|+++++++|++.+.+++.. |+|+++
T Consensus 289 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 289 DDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred HHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 24688899999999887666678999999999999999877665 999864
|
L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai |
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=298.06 Aligned_cols=329 Identities=34% Similarity=0.545 Sum_probs=271.5
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 81 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd 81 (371)
|||+++..+++++.+++.|.|.+.+++|+|+++++++|+.|++...|..+....|.++|+|++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd 80 (332)
T cd08259 1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGD 80 (332)
T ss_pred CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCC
Confidence 79999988666799999999999999999999999999999999988776556788999999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCc
Q 017431 82 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 161 (371)
Q Consensus 82 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~ 161 (371)
+|++.+...|+.|.+|..+..+.|.+.. .+|.. .+ |+|++|+.++.+.++++|+++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~------------------g~~~~~~~v~~~~~~~ip~~~~~ 138 (332)
T cd08259 81 RVILYYYIPCGKCEYCLSGEENLCRNRA---EYGEE-VD------------------GGFAEYVKVPERSLVKLPDNVSD 138 (332)
T ss_pred EEEECCCCCCcCChhhhCCCcccCCCcc---ccccc-cC------------------CeeeeEEEechhheEECCCCCCH
Confidence 9999999999999999999999997642 23321 23 49999999999999999999999
Q ss_pred chhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 162 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 162 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
++++.+++++.+||+++.. ..+.++++|||+|+ |.+|++++++++..|+ +|+++.+++++.+.+++++.+.+++..+
T Consensus 139 ~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (332)
T cd08259 139 ESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGSK 216 (332)
T ss_pred HHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecHH
Confidence 9999999999999999866 88999999999987 9999999999999999 7888888888888888899877775432
Q ss_pred CCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccch-heeeceEEEeeecCCCcc
Q 017431 241 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF-QLVTGRVWKGTAFGGFKS 319 (371)
Q Consensus 241 ~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~ 319 (371)
+.+.+.+.. ++|++++++|... ...++++++++ |+++.+|....... .+... ...++..+.++.. ..
T Consensus 217 ----~~~~~~~~~--~~d~v~~~~g~~~-~~~~~~~~~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~ 284 (332)
T cd08259 217 ----FSEDVKKLG--GADVVIELVGSPT-IEESLRSLNKG-GRLVLIGNVTPDPA-PLRPGLLILKEIRIIGSIS---AT 284 (332)
T ss_pred ----HHHHHHhcc--CCCEEEECCChHH-HHHHHHHhhcC-CEEEEEcCCCCCCc-CCCHHHHHhCCcEEEEecC---CC
Confidence 445555543 7999999999854 88999999996 99999987532211 11111 1123455555431 22
Q ss_pred cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 320 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
..+++.+++++.++.+++ .++++|+++++++|++.+.+++.. |++++
T Consensus 285 ~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 285 KADVEEALKLVKEGKIKP--VIDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred HHHHHHHHHHHHcCCCcc--ceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 356888999999988653 467899999999999999988776 88864
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-40 Score=299.43 Aligned_cols=269 Identities=26% Similarity=0.404 Sum_probs=220.2
Q ss_pred ccccceeEEEEEeCCCCC------CCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcc
Q 017431 58 ILGHEAAGIVESVGEGVT------EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKP 131 (371)
Q Consensus 58 v~G~e~~G~V~~~G~~v~------~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~ 131 (371)
++|||++|+|+++|++|+ ++++||||++.+..+|+.|.+|+.++++.|.+.... |....++
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~---g~~~~~~---------- 67 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKY---GHEALDS---------- 67 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhc---CcccccC----------
Confidence 589999999999999999 899999999999999999999999999999865431 2110000
Q ss_pred eeeccCCcceeeeEEeccc-ceEecCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcC
Q 017431 132 IYHFMGTSTFSQYTVVHDV-SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG 210 (371)
Q Consensus 132 ~~~~~~~g~~a~~~~v~~~-~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g 210 (371)
.....|+|+||+.++++ .++++|+++++++|+.+++.+.|+|+++. .....+|++|||+|+|++|++++|+|+++|
T Consensus 68 --~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G 144 (280)
T TIGR03366 68 --GWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAALE-AAGDLKGRRVLVVGAGMLGLTAAAAAAAAG 144 (280)
T ss_pred --CccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHH-hccCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 00012499999999997 79999999999999999999999999874 455669999999999999999999999999
Q ss_pred CCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEcc
Q 017431 211 ASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 211 ~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
+++|++++++++|.++++++|++.+++..+ ..+.+.+.+++ ++|++||++|++..++.++++++++ |+++.+|.
T Consensus 145 ~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~ 219 (280)
T TIGR03366 145 AARVVAADPSPDRRELALSFGATALAEPEV----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAGS 219 (280)
T ss_pred CCEEEEECCCHHHHHHHHHcCCcEecCchh----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEecc
Confidence 966999999999999999999998887643 24556677776 8999999999988899999999997 99999997
Q ss_pred CCCCCcccccchhee-eceEEEeeecCCCcccCcHHHHHHHHHcC--CCCCCCceeeeeecccH
Q 017431 290 AASGQEISTRPFQLV-TGRVWKGTAFGGFKSRSQVPWLVDKYMKK--EIKVDEYVTHNMTLGEI 350 (371)
Q Consensus 290 ~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~ 350 (371)
.......++++..+. +++++.|+... ..++++++++++.++ ++++.++++++|+|+|+
T Consensus 220 ~~~~~~~~i~~~~~~~~~~~i~g~~~~---~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 220 VFPGGPVALDPEQVVRRWLTIRGVHNY---EPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred CCCCCceeeCHHHHHhCCcEEEecCCC---CHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 533334455555544 48889887543 235799999999874 67777889999999874
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. |
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-39 Score=300.27 Aligned_cols=299 Identities=20% Similarity=0.281 Sum_probs=240.4
Q ss_pred eEEEE---eeCC-CCCCCeEEEEEeeeecCccccccccCCCCCCCCCccccc--ceeEEEEEeCCCCCCCCCCCEEeecC
Q 017431 14 LVIED---VQVA-PPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH--EAAGIVESVGEGVTEVQPGDHVIPCY 87 (371)
Q Consensus 14 ~~~~~---~~~~-~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~--e~~G~V~~~G~~v~~~~~Gd~V~~~~ 87 (371)
|++.+ ++.| ++.++|||||+.++++|+.|...+.+.......|.++|+ |++|+|..+|++++.|++||+|+..
T Consensus 27 f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~G~v~~vg~~v~~~~~Gd~V~~~- 105 (348)
T PLN03154 27 MEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGFGVSKVVDSDDPNFKPGDLISGI- 105 (348)
T ss_pred EEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEeeEEEEEEecCCCCCCCCCEEEec-
Confidence 88887 4666 358999999999999999987644332222235889998 8899999999999999999999631
Q ss_pred CCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccc--eEe--cCCCCCcc-
Q 017431 88 QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS--VAK--IDPQAPLD- 162 (371)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~--v~~--lP~~~~~~- 162 (371)
++|++|+.++.+. +++ +|++++++
T Consensus 106 ---------------------------------------------------~~~aey~~v~~~~~~~~~~~~P~~~~~~~ 134 (348)
T PLN03154 106 ---------------------------------------------------TGWEEYSLIRSSDNQLRKIQLQDDIPLSY 134 (348)
T ss_pred ---------------------------------------------------CCcEEEEEEeccccceEEccCcCCCCHHH
Confidence 2899999998753 544 59999986
Q ss_pred hhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCcEEecCCC
Q 017431 163 KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKD 240 (371)
Q Consensus 163 ~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~vi~~~~ 240 (371)
+||+++++++|||+++.+..++++|++|||+|+ |++|++++|+|+++|+ +|+++++++++.++++ ++|+++++++.+
T Consensus 135 ~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~ 213 (348)
T PLN03154 135 HLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYKE 213 (348)
T ss_pred HHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhcCCCEEEECCC
Confidence 688899999999999988889999999999988 9999999999999999 7999999999999887 799999998764
Q ss_pred CCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCccc-----ccchhe-eeceEEEeeec
Q 017431 241 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS-----TRPFQL-VTGRVWKGTAF 314 (371)
Q Consensus 241 ~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~-----~~~~~~-~~~~~~~g~~~ 314 (371)
. .++.+.+++.+++++|++||++|+ ..+..++++++++ |+++.+|..... ..+ ++...+ .+++++.|+..
T Consensus 214 ~-~~~~~~i~~~~~~gvD~v~d~vG~-~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~~~k~~~i~g~~~ 289 (348)
T PLN03154 214 E-PDLDAALKRYFPEGIDIYFDNVGG-DMLDAALLNMKIH-GRIAVCGMVSLN-SLSASQGIHNLYNLISKRIRMQGFLQ 289 (348)
T ss_pred c-ccHHHHHHHHCCCCcEEEEECCCH-HHHHHHHHHhccC-CEEEEECccccC-CCCCCCCcccHHHHhhccceEEEEEH
Confidence 1 356677777776689999999998 5799999999996 999999875321 111 122222 34778888765
Q ss_pred CCCc--ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecCC
Q 017431 315 GGFK--SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQD 371 (371)
Q Consensus 315 ~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~d 371 (371)
..+. ..+.+++++++++++++++ .+.++|+|+++++|++.+++++.. |+||++.+
T Consensus 290 ~~~~~~~~~~~~~~~~l~~~G~l~~--~~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~~ 347 (348)
T PLN03154 290 SDYLHLFPQFLENVSRYYKQGKIVY--IEDMSEGLESAPAALVGLFSGKNVGKQVIRVAK 347 (348)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCccC--ceecccCHHHHHHHHHHHHcCCCCceEEEEecC
Confidence 4321 1245778999999999874 366789999999999999998887 99998853
|
|
| >TIGR00692 tdh L-threonine 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=297.47 Aligned_cols=334 Identities=26% Similarity=0.393 Sum_probs=269.1
Q ss_pred EeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCC---CCCCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 017431 6 VAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD---PEGLFPCILGHEAAGIVESVGEGVTEVQPGDH 82 (371)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~---~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd~ 82 (371)
..+++++++++++.|.|.|.++||+||+.++++|+.|+..+.+.. ...++|.++|+|++|+|+++|++++.+++||+
T Consensus 3 ~~~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~ 82 (340)
T TIGR00692 3 MKTKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDY 82 (340)
T ss_pred ccccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCE
Confidence 346788889999999999999999999999999999998765542 11245778999999999999999999999999
Q ss_pred EeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCcc
Q 017431 83 VIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLD 162 (371)
Q Consensus 83 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~~ 162 (371)
|++.+...|+.|..|..+..+.|...+. +|.. . .|+|++|++++.+.++++|++++.+
T Consensus 83 V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~------------------~g~~~~~~~~~~~~~~~lp~~~~~~ 140 (340)
T TIGR00692 83 VSVETHIVCGKCYACRRGQYHVCQNTKI---FGVD-T------------------DGCFAEYAVVPAQNIWKNPKSIPPE 140 (340)
T ss_pred EEECCcCCCCCChhhhCcChhhCcCcce---Eeec-C------------------CCcceeEEEeehHHcEECcCCCChH
Confidence 9999999999999999999999987532 2211 1 2499999999999999999999985
Q ss_pred hhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCC
Q 017431 163 KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD 242 (371)
Q Consensus 163 ~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~ 242 (371)
+| +++.++.+|++++ .....+|++|+|.|+|.+|.+++|+|+.+|++.|+++++++++.++++++|++.+++..+
T Consensus 141 ~a-~~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~-- 215 (340)
T TIGR00692 141 YA-TIQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK-- 215 (340)
T ss_pred hh-hhcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc--
Confidence 54 5677888898876 345779999999888999999999999999955888888888999999999988888766
Q ss_pred chHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCCcccC
Q 017431 243 KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRS 321 (371)
Q Consensus 243 ~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 321 (371)
.++.+.+.+.+++ ++|+++||+++...+...+++|+++ |+++.+|.......+++....+.++.++.+... ....+
T Consensus 216 ~~~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 292 (340)
T TIGR00692 216 EDVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITG--RHMFE 292 (340)
T ss_pred cCHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCCCCcccchhhhhhhcceEEEEEec--CCchh
Confidence 5677788888776 8999999999877789999999996 999999875322122222112223556655441 11224
Q ss_pred cHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEec
Q 017431 322 QVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 369 (371)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~ 369 (371)
.+..++++++++++++.+.+.+.+++++++++++.+.+++..|+|+.+
T Consensus 293 ~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~gkvvv~~ 340 (340)
T TIGR00692 293 TWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQTGKVILSL 340 (340)
T ss_pred hHHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 577889999999987655578999999999999999877645998864
|
E. coli His-90 modulates substrate specificity and is believed part of the active site. |
| >cd08234 threonine_DH_like L-threonine dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-38 Score=295.37 Aligned_cols=330 Identities=30% Similarity=0.483 Sum_probs=271.9
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 81 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd 81 (371)
|||+++.+++. +++.+.|.|++.+++|+||+.++++|+.|+....|..+.. +|.++|+|++|+|+++|++++.+++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~~-~p~~~g~~~~G~v~~vG~~v~~~~~Gd 78 (334)
T cd08234 1 MKALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGAA-PPLVPGHEFAGVVVAVGSKVTGFKVGD 78 (334)
T ss_pred CeeEEecCCCc-eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCCC-CCcccccceEEEEEEeCCCCCCCCCCC
Confidence 79999998885 9999999999999999999999999999999988876543 788999999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCc
Q 017431 82 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 161 (371)
Q Consensus 82 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~ 161 (371)
+|++.+...|+.|.+|..+..+.|..... .|.. .+ |+|++|+.++.+.++++|+++++
T Consensus 79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~v~~~~~~~lP~~~~~ 136 (334)
T cd08234 79 RVAVDPNIYCGECFYCRRGRPNLCENLTA---VGVT-RN------------------GGFAEYVVVPAKQVYKIPDNLSF 136 (334)
T ss_pred EEEEcCCcCCCCCccccCcChhhCCCcce---eccC-CC------------------CcceeEEEecHHHcEECcCCCCH
Confidence 99999988999999998888877765431 1111 12 49999999999999999999999
Q ss_pred chhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCC
Q 017431 162 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241 (371)
Q Consensus 162 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~ 241 (371)
.+|+.+ ..+.++++++ ...++++|++|||+|+|.+|.+++++|+++|+++|+++++++++.+.++++|++.+++..+
T Consensus 137 ~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~- 213 (334)
T cd08234 137 EEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR- 213 (334)
T ss_pred HHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCC-
Confidence 998776 6788999887 7889999999999988999999999999999955888989999999999999988887765
Q ss_pred CchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecCCCcc
Q 017431 242 DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKS 319 (371)
Q Consensus 242 ~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~ 319 (371)
..+... +.+.+ ++|+++|+++....+...+++++++ |+++.+|........++....+. ++.++.+....
T Consensus 214 -~~~~~~--~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 285 (334)
T cd08234 214 -EDPEAQ--KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN---- 285 (334)
T ss_pred -CCHHHH--HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC----
Confidence 333333 34444 8999999998777799999999996 99999987543233444444333 35566655432
Q ss_pred cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEE
Q 017431 320 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 367 (371)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl 367 (371)
...++.+++++.++.+++.+.++++|+++++++|++.+.+ +.. |+|+
T Consensus 286 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 286 PYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred HHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 2468889999999988766656789999999999999988 554 8876
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. |
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-38 Score=294.99 Aligned_cols=335 Identities=26% Similarity=0.393 Sum_probs=276.4
Q ss_pred cceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
|||+++...+.+ +++.+.+.|++.+++|+|++.++++|++|++.+.|.... ..+|.++|||++|+|+++|++++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK 80 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence 799999854433 888888888899999999999999999999988886542 24678899999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||+|++.+..+|+.|.+|..+.++.|..... .|.. .+ |++++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~-~~------------------g~~~~~~~~~~~~~~~~p~~ 138 (342)
T cd08266 81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGI---LGEH-VD------------------GGYAEYVAVPARNLLPIPDN 138 (342)
T ss_pred CCCEEEEccccccccchhhccccccccccccc---cccc-cC------------------cceeEEEEechHHceeCCCC
Confidence 99999999999999999999999999986431 2221 22 48999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
+++.+++.+++++.+||+++.+..++.++++|+|+|+ +.+|++++++++..|+ +++.+++++++.+.+++++.+.+++
T Consensus 139 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~ 217 (342)
T cd08266 139 LSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVID 217 (342)
T ss_pred CCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEe
Confidence 9999999999999999999888889999999999988 7999999999999999 7888888888888888888877776
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccc-hheeeceEEEeeecC
Q 017431 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP-FQLVTGRVWKGTAFG 315 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~~ 315 (371)
..+ .++.+.+.+.+.+ ++|++++++|. ..+...+++++++ |+++.+|..... ...... ..+.++.++.+....
T Consensus 218 ~~~--~~~~~~~~~~~~~~~~d~~i~~~g~-~~~~~~~~~l~~~-G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 292 (342)
T cd08266 218 YRK--EDFVREVRELTGKRGVDVVVEHVGA-ATWEKSLKSLARG-GRLVTCGATTGY-EAPIDLRHVFWRQLSILGSTMG 292 (342)
T ss_pred cCC--hHHHHHHHHHhCCCCCcEEEECCcH-HHHHHHHHHhhcC-CEEEEEecCCCC-CCCcCHHHHhhcceEEEEEecC
Confidence 654 5666677777766 89999999998 4589999999996 999999865332 222332 123346677666543
Q ss_pred CCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 316 GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
. ...+..+++++.++.+++ .+++.|+++++++|++.+.+++.. |++++.
T Consensus 293 ~---~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 293 T---KAELDEALRLVFRGKLKP--VIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred C---HHHHHHHHHHHHcCCccc--ceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 2 246888899998888653 467899999999999999887766 888763
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=297.14 Aligned_cols=299 Identities=19% Similarity=0.255 Sum_probs=231.5
Q ss_pred eEEEEeeCCCCC-CCeEEEEEeeeecCcccccccc---CCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCC
Q 017431 14 LVIEDVQVAPPQ-AGEVRIKILFTALCHTDAYTWS---GKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQA 89 (371)
Q Consensus 14 ~~~~~~~~~~~~-~~eVlV~v~~~~i~~~D~~~~~---g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~ 89 (371)
+++.+.|.|+|. ++||+|||+++|||+.|..... +.....++|.++|||++|+|+++|++++.|++||+|+...
T Consensus 23 ~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-- 100 (345)
T cd08293 23 FRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN-- 100 (345)
T ss_pred eEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEecC--
Confidence 899999999874 9999999999999998854332 2111224678999999999999999999999999997320
Q ss_pred CCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCcch----hh
Q 017431 90 ECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDK----VC 165 (371)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~~~----aa 165 (371)
++|++|++++.+.++++|+++++.+ ++
T Consensus 101 -------------------------------------------------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a 131 (345)
T cd08293 101 -------------------------------------------------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLG 131 (345)
T ss_pred -------------------------------------------------CCceeEEEecHHHeEEcCccccccchhHHhh
Confidence 1799999999999999999865443 45
Q ss_pred hccccchhhhhhhhhcCCCCCC--CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCcEEecCCCC
Q 017431 166 LLGCGVPTGLGAVWNTAKVEPG--SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDH 241 (371)
Q Consensus 166 ~~~~~~~ta~~~l~~~~~~~~g--~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~-~g~~~vi~~~~~ 241 (371)
+++.++.|||+++.+..++++| ++|||+|+ |++|++++|+|+++|+.+|+++++++++.+.+++ +|+++++++.+
T Consensus 132 ~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~- 210 (345)
T cd08293 132 AVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT- 210 (345)
T ss_pred hcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC-
Confidence 6777899999998888888877 99999988 9999999999999998679999999999888876 99999998876
Q ss_pred CchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCC-Cccc----ccc--hhee--eceEEEee
Q 017431 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG-QEIS----TRP--FQLV--TGRVWKGT 312 (371)
Q Consensus 242 ~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~-~~~~----~~~--~~~~--~~~~~~g~ 312 (371)
.++.+.+++++++++|++||++|+.. +..++++++++ |+++.+|..... .... +.. ..+. .+.+...+
T Consensus 211 -~~~~~~i~~~~~~gvd~vid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (345)
T cd08293 211 -DNVAERLRELCPEGVDVYFDNVGGEI-SDTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERF 287 (345)
T ss_pred -CCHHHHHHHHCCCCceEEEECCCcHH-HHHHHHHhccC-CEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEE
Confidence 66778888877668999999999954 79999999996 999999853210 1011 110 0111 13333332
Q ss_pred ecCCCc--ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 313 AFGGFK--SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 313 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
....+. ..+.++++++++.++.+++. ....++++++++|++.+.+++.. |+|+++
T Consensus 288 ~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 288 LVLNYKDKFEEAIAQLSQWVKEGKLKVK--ETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred EeeccHhHHHHHHHHHHHHHHCCCccce--eEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 221111 11346678889999998754 34567999999999999988776 999875
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=271.69 Aligned_cols=312 Identities=22% Similarity=0.306 Sum_probs=252.5
Q ss_pred cceEEeecCCCC---eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCC-CCCcccccceeEEEEEeCCCCCCC
Q 017431 2 CKAAVAWEPNKP---LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVTEV 77 (371)
Q Consensus 2 ~~a~~~~~~~~~---~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~-~~p~v~G~e~~G~V~~~G~~v~~~ 77 (371)
.|+++|.+.|+| +++++.++|.....+|+||..|+.||++|+..++|.++-. ++|++-|+|++|+|+.+|+++++|
T Consensus 20 ~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs~vkgf 99 (354)
T KOG0025|consen 20 SKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGSNVKGF 99 (354)
T ss_pred cceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecCCcCcc
Confidence 589999999999 8899999998888889999999999999999999999766 789999999999999999999999
Q ss_pred CCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCC
Q 017431 78 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 157 (371)
Q Consensus 78 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~ 157 (371)
++||+|+.... +.|+|++|.+.+++.++++++
T Consensus 100 k~Gd~VIp~~a------------------------------------------------~lGtW~t~~v~~e~~Li~vd~ 131 (354)
T KOG0025|consen 100 KPGDWVIPLSA------------------------------------------------NLGTWRTEAVFSESDLIKVDK 131 (354)
T ss_pred CCCCeEeecCC------------------------------------------------CCccceeeEeecccceEEcCC
Confidence 99999986532 245999999999999999999
Q ss_pred CCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhH----HHHHhcCC
Q 017431 158 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKF----DRAKNFGV 232 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~----~~~~~~g~ 232 (371)
.++++.||.+..+.+|||..|.+...+.+|++|+-.|| +++|++.+|+|+++|++.+-++ |+.... +.++.+|+
T Consensus 132 ~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvV-RdR~~ieel~~~Lk~lGA 210 (354)
T KOG0025|consen 132 DIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVV-RDRPNIEELKKQLKSLGA 210 (354)
T ss_pred cCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEe-ecCccHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999888888 9999999999999999555555 554333 34466999
Q ss_pred cEEecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEE
Q 017431 233 TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWK 310 (371)
Q Consensus 233 ~~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~ 310 (371)
++++...+.... ...+..... .+.+.|||+|+.. .....+.|.+| |+++.+|.. +..+++.+...++ +.++++
T Consensus 211 ~~ViTeeel~~~--~~~k~~~~~~~prLalNcVGGks-a~~iar~L~~G-gtmvTYGGM-SkqPv~~~ts~lIFKdl~~r 285 (354)
T KOG0025|consen 211 TEVITEEELRDR--KMKKFKGDNPRPRLALNCVGGKS-ATEIARYLERG-GTMVTYGGM-SKQPVTVPTSLLIFKDLKLR 285 (354)
T ss_pred ceEecHHHhcch--hhhhhhccCCCceEEEeccCchh-HHHHHHHHhcC-ceEEEecCc-cCCCcccccchheeccceee
Confidence 999965442111 111111223 7999999999965 77888889997 999999884 5566666655554 599999
Q ss_pred eeecCCCcccC--------cHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCe--eEEEEec
Q 017431 311 GTAFGGFKSRS--------QVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDC--LRCVLKM 369 (371)
Q Consensus 311 g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~--~kvvl~~ 369 (371)
|+++..|...+ .+.++.+++.+|++.... ....+|++...|++...+.-. .|-++.+
T Consensus 286 GfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~--~e~v~L~~~~tald~~L~~~~~~~Kq~i~~ 352 (354)
T KOG0025|consen 286 GFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPN--CEKVPLADHKTALDAALSKFGKSGKQIIVL 352 (354)
T ss_pred eeeeeehhhccCCcHHHHHHHHHHHHHHHcCeecccc--ceeeechhhhHHHHHHHHHhccCCceEEEe
Confidence 99998885432 355688899999987543 355689999888886554332 2555544
|
|
| >cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-38 Score=296.85 Aligned_cols=323 Identities=25% Similarity=0.288 Sum_probs=257.8
Q ss_pred cceEEeecCCCC--eEEEE-eeCCCCCCCeEEEEEeeeecCccccccccCCCC--------------------CCCCCcc
Q 017431 2 CKAAVAWEPNKP--LVIED-VQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP--------------------EGLFPCI 58 (371)
Q Consensus 2 ~~a~~~~~~~~~--~~~~~-~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~--------------------~~~~p~v 58 (371)
||++++..++.+ +++.+ .+.|++.+++|+|||.++++|++|++...|.++ ..++|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 789999887754 66654 577788999999999999999999998877543 2357889
Q ss_pred cccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCC
Q 017431 59 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGT 138 (371)
Q Consensus 59 ~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~ 138 (371)
+|||++|+|+++|+++++|++||+|++.+..+|+.|..|.. |.. +|.. .+
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~-----~~~------~~~~-~~------------------ 130 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPAD-----IDY------IGSE-RD------------------ 130 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCcccccc-----ccc------cCCC-CC------------------
Confidence 99999999999999999999999999988888888765432 110 1110 12
Q ss_pred cceeeeEEecccceEecCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE
Q 017431 139 STFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI 217 (371)
Q Consensus 139 g~~a~~~~v~~~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v 217 (371)
|++++|+.++.+.++++|+++++.+++.+++++.|||+++ ...++++|++|||+|+ |++|++++++|+++|+ +++++
T Consensus 131 g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~ 208 (350)
T cd08274 131 GGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAV 208 (350)
T ss_pred ccceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEE
Confidence 3999999999999999999999999999999999999987 7788999999999998 9999999999999999 67777
Q ss_pred cCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcc
Q 017431 218 DIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI 296 (371)
Q Consensus 218 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~ 296 (371)
++++ +.+.++++|++.+++..+ ..+.+ .+.+++ ++|++||++|+ ..++.++++++++ |+++.+|... ....
T Consensus 209 ~~~~-~~~~~~~~g~~~~~~~~~--~~~~~--~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~-~~~~ 280 (350)
T cd08274 209 AGAA-KEEAVRALGADTVILRDA--PLLAD--AKALGGEPVDVVADVVGG-PLFPDLLRLLRPG-GRYVTAGAIA-GPVV 280 (350)
T ss_pred eCch-hhHHHHhcCCeEEEeCCC--ccHHH--HHhhCCCCCcEEEecCCH-HHHHHHHHHhccC-CEEEEecccC-Cccc
Confidence 7665 788889999976655433 33333 455566 89999999998 5689999999996 9999998642 2223
Q ss_pred cccchh-eeeceEEEeeecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 297 STRPFQ-LVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 297 ~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
.++... +.++.++.++.... ...+..+++++.+++++. .+.++|+++++++|++.+.+++.. |+++++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 281 ELDLRTLYLKDLTLFGSTLGT---REVFRRLVRYIEEGEIRP--VVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred cCCHHHhhhcceEEEEeecCC---HHHHHHHHHHHHCCCccc--ccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 444444 33477777776532 357888999999998753 467889999999999999887766 888763
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-38 Score=294.20 Aligned_cols=320 Identities=28% Similarity=0.369 Sum_probs=258.1
Q ss_pred cceEEeecCC-CCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 2 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 2 ~~a~~~~~~~-~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
||++++..++ +.+++.+.+.|+++++||+|++.++++|++|+..+.+. ....+|.++|||++|+|+++|++++.+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~~~~~~~~g~e~~G~v~~vG~~v~~~~~G 79 (325)
T cd08264 1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-KVKPMPHIPGAEFAGVVEEVGDHVKGVKKG 79 (325)
T ss_pred CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCC-CCCCCCeecccceeEEEEEECCCCCCCCCC
Confidence 7899998776 45899999988899999999999999999999887652 222457789999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|+|++.+...|+.|.+|+.+..+.|..... +|+. . .|+|++|++++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~---~~~~-~------------------~g~~~~~~~v~~~~~~~~p~~~~ 137 (325)
T cd08264 80 DRVVVYNRVFDGTCDMCLSGNEMLCRNGGI---IGVV-S------------------NGGYAEYIVVPEKNLFKIPDSIS 137 (325)
T ss_pred CEEEECCCcCCCCChhhcCCCccccCccce---eecc-C------------------CCceeeEEEcCHHHceeCCCCCC
Confidence 999999999999999999999999986432 2221 2 24999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 239 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~ 239 (371)
+++++.+++++.+||+++.. .++++|++|+|+|+ |++|++++++|+++|+ +|+++++ .+.++++|++++++..
T Consensus 138 ~~~~~~~~~~~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~~----~~~~~~~g~~~~~~~~ 211 (325)
T cd08264 138 DELAASLPVAALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVSR----KDWLKEFGADEVVDYD 211 (325)
T ss_pred HHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeH----HHHHHHhCCCeeecch
Confidence 99999999999999998855 88999999999998 9999999999999999 6777752 3667889998888764
Q ss_pred CCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheee-ceEEEeeecCCCc
Q 017431 240 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFK 318 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~ 318 (371)
+ ..+.+.+++ +++|++++++|+ ..+..++++++++ |+++.+|... .....++...+.. +.++.+...+
T Consensus 212 ~----~~~~l~~~~-~~~d~vl~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~--- 280 (325)
T cd08264 212 E----VEEKVKEIT-KMADVVINSLGS-SFWDLSLSVLGRG-GRLVTFGTLT-GGEVKLDLSDLYSKQISIIGSTGG--- 280 (325)
T ss_pred H----HHHHHHHHh-CCCCEEEECCCH-HHHHHHHHhhccC-CEEEEEecCC-CCCCccCHHHHhhcCcEEEEccCC---
Confidence 3 245566666 689999999998 5699999999996 9999998642 1223333333332 5566665433
Q ss_pred ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EE
Q 017431 319 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RC 365 (371)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kv 365 (371)
.+++++.+++++...+ ..+.++|+++++++|++.+.+++.. |+
T Consensus 281 ~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 281 TRKELLELVKIAKDLK----VKVWKTFKLEEAKEALKELFSKERDGRI 324 (325)
T ss_pred CHHHHHHHHHHHHcCC----ceeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence 2357888888885332 2356889999999999998876654 54
|
This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo |
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=297.23 Aligned_cols=309 Identities=23% Similarity=0.285 Sum_probs=243.6
Q ss_pred ceEEeecCCC-CeEEEEeeC----CCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccce--eEEEEEeCCCC
Q 017431 3 KAAVAWEPNK-PLVIEDVQV----APPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEA--AGIVESVGEGV 74 (371)
Q Consensus 3 ~a~~~~~~~~-~~~~~~~~~----~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~--~G~V~~~G~~v 74 (371)
|++....+.. .|++++.++ |+|+++||||||++++||+.|++.+.|.... ...|.++|+++ .|++..+|+.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~~v 88 (338)
T cd08295 9 KAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDSGN 88 (338)
T ss_pred ecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEecCC
Confidence 4444433332 399999988 7899999999999999999999988885433 24678889755 45666678888
Q ss_pred CCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecc-cceE
Q 017431 75 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD-VSVA 153 (371)
Q Consensus 75 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~v~ 153 (371)
+.|++||+|+.. |+|+||++++. ..++
T Consensus 89 ~~~~vGd~V~~~----------------------------------------------------g~~aey~~v~~~~~~~ 116 (338)
T cd08295 89 PDFKVGDLVWGF----------------------------------------------------TGWEEYSLIPRGQDLR 116 (338)
T ss_pred CCCCCCCEEEec----------------------------------------------------CCceeEEEecchhcee
Confidence 899999999621 28999999999 7999
Q ss_pred ecC-CCCCcc-hhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-
Q 017431 154 KID-PQAPLD-KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN- 229 (371)
Q Consensus 154 ~lP-~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~- 229 (371)
++| +++++. +++.++++++|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+++++
T Consensus 117 ~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~~ 195 (338)
T cd08295 117 KIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKNK 195 (338)
T ss_pred ecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHh
Confidence 995 678876 789999999999999988899999999999988 9999999999999999 79999899999999988
Q ss_pred cCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcc----cccchh-ee
Q 017431 230 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI----STRPFQ-LV 304 (371)
Q Consensus 230 ~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~----~~~~~~-~~ 304 (371)
+|+++++++.+ ..++.+.+.+.+++++|++||++|+ ..+..++++++++ |+++.+|........ ..+... +.
T Consensus 196 lGa~~vi~~~~-~~~~~~~i~~~~~~gvd~v~d~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~ 272 (338)
T cd08295 196 LGFDDAFNYKE-EPDLDAALKRYFPNGIDIYFDNVGG-KMLDAVLLNMNLH-GRIAACGMISQYNLEWPEGVRNLLNIIY 272 (338)
T ss_pred cCCceeEEcCC-cccHHHHHHHhCCCCcEEEEECCCH-HHHHHHHHHhccC-cEEEEecccccCCCCCCCCccCHHHHhh
Confidence 99999998654 1356677777765599999999998 6699999999996 999999864321110 011122 23
Q ss_pred eceEEEeeecCCCcc--cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 305 TGRVWKGTAFGGFKS--RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 305 ~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
++.++.++....+.. .+.++.+++++.++++++. +...|+++++++|++.+++++.. |+|+++
T Consensus 273 ~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 273 KRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYV--EDIADGLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred ccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEce--eecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence 366777655433221 2346778999999998754 44669999999999999988776 999874
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-38 Score=293.75 Aligned_cols=304 Identities=20% Similarity=0.228 Sum_probs=242.8
Q ss_pred CcceEEeecC--CCC----eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCC
Q 017431 1 MCKAAVAWEP--NKP----LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGV 74 (371)
Q Consensus 1 ~~~a~~~~~~--~~~----~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v 74 (371)
+||++++.+. +.+ +++++.|.|+|+++||+|||+++++|+.|.....+ ..++|.++|+|++|+|++ .+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~---~~~~p~v~G~e~~G~V~~---~~ 75 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR---LNEGDTMIGTQVAKVIES---KN 75 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc---CCCCCcEecceEEEEEec---CC
Confidence 6999999983 333 89999999999999999999999999887542211 124688999999999995 44
Q ss_pred CCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEeccc---c
Q 017431 75 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV---S 151 (371)
Q Consensus 75 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~---~ 151 (371)
+.|++||||+.. ++|++|+.++.+ .
T Consensus 76 ~~~~~Gd~V~~~----------------------------------------------------~~~~~~~~~~~~~~~~ 103 (329)
T cd08294 76 SKFPVGTIVVAS----------------------------------------------------FGWRTHTVSDGKDQPD 103 (329)
T ss_pred CCCCCCCEEEee----------------------------------------------------CCeeeEEEECCccccc
Confidence 679999999732 178999999999 9
Q ss_pred eEecCCCCC--c---chhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 017431 152 VAKIDPQAP--L---DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD 225 (371)
Q Consensus 152 v~~lP~~~~--~---~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~ 225 (371)
++++|++++ . ..+++++++++|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+
T Consensus 104 ~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~ 182 (329)
T cd08294 104 LYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVA 182 (329)
T ss_pred eEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Confidence 999999998 2 2334678899999999988899999999999986 9999999999999999 7999999999999
Q ss_pred HHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCC--cc---cccc
Q 017431 226 RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQ--EI---STRP 300 (371)
Q Consensus 226 ~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~--~~---~~~~ 300 (371)
+++++|+++++++.+ .++.+.+++.+++++|++||++|+ ..+..++++++++ |+++.+|...... .. ....
T Consensus 183 ~l~~~Ga~~vi~~~~--~~~~~~v~~~~~~gvd~vld~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~ 258 (329)
T cd08294 183 WLKELGFDAVFNYKT--VSLEEALKEAAPDGIDCYFDNVGG-EFSSTVLSHMNDF-GRVAVCGSISTYNDKEPKKGPYVQ 258 (329)
T ss_pred HHHHcCCCEEEeCCC--ccHHHHHHHHCCCCcEEEEECCCH-HHHHHHHHhhccC-CEEEEEcchhccCCCCCCcCcccH
Confidence 999999999998876 677777877776689999999998 6689999999996 9999998532111 01 1111
Q ss_pred h-heeeceEEEeeecCCCc--ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 301 F-QLVTGRVWKGTAFGGFK--SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 301 ~-~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
. .+.+++++.++....+. ..+.++.+++++.++.+++. ...+|+++++++|++.+.+++.. |+++++
T Consensus 259 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 259 ETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYR--EHVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred HHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCC--cccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 1 22346777776543321 12246678899999998765 33568999999999999988776 999864
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=289.00 Aligned_cols=323 Identities=27% Similarity=0.378 Sum_probs=265.5
Q ss_pred cceEEeecCCC----CeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCC
Q 017431 2 CKAAVAWEPNK----PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEV 77 (371)
Q Consensus 2 ~~a~~~~~~~~----~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~ 77 (371)
||++++.++++ ++++.+.+.|.+.++||+||+.++++|++|++.+.|..+...+|.++|||++|+|+++|++++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF 80 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence 79999998884 58899999888999999999999999999999988877655678899999999999999999999
Q ss_pred CCCCEEeecC-CCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecC
Q 017431 78 QPGDHVIPCY-QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 156 (371)
Q Consensus 78 ~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP 156 (371)
++||+|++.+ ..+|++|.+|..+.++.|..... .|+. . .|+|++|+.++.+.++++|
T Consensus 81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~------------------~g~~~~~~~~~~~~~~~lp 138 (329)
T cd08298 81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARF---TGYT-V------------------DGGYAEYMVADERFAYPIP 138 (329)
T ss_pred cCCCEEEEeccCCCCCCChhHhCcChhhCCCccc---cccc-c------------------CCceEEEEEecchhEEECC
Confidence 9999997654 46789999999999999975542 2221 1 2499999999999999999
Q ss_pred CCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEe
Q 017431 157 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 236 (371)
Q Consensus 157 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi 236 (371)
+++++.+++.+++++.+||+++ ...+++++++|||+|+|++|+++++++++.|+ +|+++++++++.+.++++|++.++
T Consensus 139 ~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 216 (329)
T cd08298 139 EDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAG 216 (329)
T ss_pred CCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEe
Confidence 9999999999999999999988 88999999999999999999999999999999 899998999999999999998877
Q ss_pred cCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCC
Q 017431 237 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGG 316 (371)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 316 (371)
+.... ..+++|+++++.+....++.++++++++ |+++.+|.... ....++...+..+..+.++...
T Consensus 217 ~~~~~-----------~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~- 282 (329)
T cd08298 217 DSDDL-----------PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVLAGIHMS-DIPAFDYELLWGEKTIRSVANL- 282 (329)
T ss_pred ccCcc-----------CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCCCC-CCCccchhhhhCceEEEEecCC-
Confidence 66441 1237999999877767899999999996 99998875321 1111222222235555554322
Q ss_pred CcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEE
Q 017431 317 FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 367 (371)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl 367 (371)
....+..+++++.++.+++ ..++|+++++++|++.+.+++.. |+++
T Consensus 283 --~~~~~~~~~~l~~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 283 --TRQDGEEFLKLAAEIPIKP---EVETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred --CHHHHHHHHHHHHcCCCCc---eEEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 2246788889998988764 35889999999999999987776 7763
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha |
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-38 Score=291.90 Aligned_cols=291 Identities=20% Similarity=0.250 Sum_probs=233.2
Q ss_pred eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCC
Q 017431 14 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRE 93 (371)
Q Consensus 14 ~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~ 93 (371)
+++.+.|.|+|+++||+|||+++++|+.|.. |.......|.++|.|++|+|++.|+ .|++||||+..
T Consensus 19 l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~------- 85 (325)
T TIGR02825 19 FELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS------- 85 (325)
T ss_pred eEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe-------
Confidence 8999999999999999999999999996543 3333233578999999999999874 59999999732
Q ss_pred CccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEec----CCCCCcchh-hhcc
Q 017431 94 CKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI----DPQAPLDKV-CLLG 168 (371)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~l----P~~~~~~~a-a~~~ 168 (371)
++|++|+.++.+.+.++ |+++++++| ++++
T Consensus 86 ---------------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~ 120 (325)
T TIGR02825 86 ---------------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVG 120 (325)
T ss_pred ---------------------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcc
Confidence 16889999999888877 999999987 6789
Q ss_pred ccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHH
Q 017431 169 CGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQ 247 (371)
Q Consensus 169 ~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~ 247 (371)
++++|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++++|+++++++.+. ..+.+
T Consensus 121 ~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~-~~~~~ 198 (325)
T TIGR02825 121 MPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKTV-KSLEE 198 (325)
T ss_pred cHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEecccc-ccHHH
Confidence 999999999888999999999999986 9999999999999999 89999999999999999999999987651 24555
Q ss_pred HHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCC---Ccccc--cchh-eeeceEEEeeecCCCc---
Q 017431 248 VLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG---QEIST--RPFQ-LVTGRVWKGTAFGGFK--- 318 (371)
Q Consensus 248 ~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~---~~~~~--~~~~-~~~~~~~~g~~~~~~~--- 318 (371)
.+...+++++|++||++|++ .+..++++++++ |+++.+|..... ...+. .... +.+++++.++....+.
T Consensus 199 ~~~~~~~~gvdvv~d~~G~~-~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 276 (325)
T TIGR02825 199 TLKKASPDGYDCYFDNVGGE-FSNTVIGQMKKF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEV 276 (325)
T ss_pred HHHHhCCCCeEEEEECCCHH-HHHHHHHHhCcC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhh
Confidence 56565545899999999985 579999999996 999999864311 11111 1122 2236677766543321
Q ss_pred ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 319 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
..+.++.+++++.++++++. +..+|+++++++|++.+++++.. |+|++
T Consensus 277 ~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 277 RQKALKELLKWVLEGKIQYK--EYVIEGFENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred hHHHHHHHHHHHHCCCcccc--eeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence 12357789999999998765 45678999999999999988776 88864
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=289.75 Aligned_cols=314 Identities=23% Similarity=0.270 Sum_probs=254.6
Q ss_pred CcceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 017431 1 MCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 1 ~~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
|||++++.+++.+ +++++++.|++.++||+|++.++++|++|++...|.++...+|.++|||++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK 80 (327)
T ss_pred CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence 7999999998875 99999999999999999999999999999999888776555788999999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||+|+.... . .|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~------------------------------~------------------~g~~~~~v~v~~~~~~~lp~~ 112 (327)
T PRK10754 81 VGDRVVYAQS------------------------------A------------------LGAYSSVHNVPADKAAILPDA 112 (327)
T ss_pred CCCEEEECCC------------------------------C------------------CcceeeEEEcCHHHceeCCCC
Confidence 9999973210 1 138999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
+++++++.+++.+.+||.++.....+++|++|+|+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++|++++++
T Consensus 113 ~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~ 191 (327)
T PRK10754 113 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVIN 191 (327)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEc
Confidence 9999999998899999998888888999999999976 9999999999999999 7888889999999999999988887
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheee-------ceEE
Q 017431 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-------GRVW 309 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-------~~~~ 309 (371)
..+ .++.+.+++.+++ ++|+++||+++ ......+++++++ |+++.+|..... ...+....+.. ...+
T Consensus 192 ~~~--~~~~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 266 (327)
T PRK10754 192 YRE--ENIVERVKEITGGKKVRVVYDSVGK-DTWEASLDCLQRR-GLMVSFGNASGP-VTGVNLGILNQKGSLYVTRPSL 266 (327)
T ss_pred CCC--CcHHHHHHHHcCCCCeEEEEECCcH-HHHHHHHHHhccC-CEEEEEccCCCC-CCCcCHHHHhccCceEEeccee
Confidence 765 5677788888887 99999999998 5588899999996 999999865321 11111111111 1111
Q ss_pred EeeecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 310 KGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 310 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
.+...........+..+++++.++.+++..+..+.|+++++++|++.+.+++.. |+|++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 326 (327)
T PRK10754 267 QGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLI 326 (327)
T ss_pred ecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence 111100000011245678899999987655557899999999999999887776 99986
|
|
| >cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=288.77 Aligned_cols=327 Identities=31% Similarity=0.478 Sum_probs=267.9
Q ss_pred ceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 017431 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDH 82 (371)
Q Consensus 3 ~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd~ 82 (371)
||+++.+++..+++++.|.|.+.+++|+|++.++++|++|+..+.|......+|.++|||++|+|+++|++++++++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~ 80 (330)
T cd08245 1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDR 80 (330)
T ss_pred CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCE
Confidence 68899999767999999999999999999999999999999998887654567889999999999999999999999999
Q ss_pred EeecCC-CCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCc
Q 017431 83 VIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 161 (371)
Q Consensus 83 V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~ 161 (371)
|++.+. .+|+.|.+|..++.+.|.+... .++. .+ |+|++|+.++.+.++++|+++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~v~~~~~~~~p~~~~~ 138 (330)
T cd08245 81 VGVGWLVGSCGRCEYCRRGLENLCQKAVN---TGYT-TQ------------------GGYAEYMVADAEYTVLLPDGLPL 138 (330)
T ss_pred EEEccccCCCCCChhhhCcCcccCcCccc---cCcc-cC------------------CccccEEEEcHHHeEECCCCCCH
Confidence 987664 5799999999999999987543 1210 12 49999999999999999999999
Q ss_pred chhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCC
Q 017431 162 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241 (371)
Q Consensus 162 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~ 241 (371)
.+++.+++.+.+||.++.. .++.++++|||+|+|.+|++++++|+.+|+ +|+++++++++.+.++++|++.+++...
T Consensus 139 ~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~- 215 (330)
T cd08245 139 AQAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGA- 215 (330)
T ss_pred HHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCC-
Confidence 9999999999999998855 789999999999988899999999999999 8999999999999999999888877654
Q ss_pred CchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecCCCccc
Q 017431 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKSR 320 (371)
Q Consensus 242 ~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~ 320 (371)
...... ..+++|++++++++......++++++++ |+++.++..... ...+....+. ++.++.++.... .
T Consensus 216 -~~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~ 285 (330)
T cd08245 216 -ELDEQA----AAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPESP-PFSPDIFPLIMKRQSIAGSTHGG---R 285 (330)
T ss_pred -cchHHh----ccCCCCEEEECCCcHHHHHHHHHhcccC-CEEEEECCCCCC-ccccchHHHHhCCCEEEEeccCC---H
Confidence 222221 2247999999988777899999999996 999999864322 2222222232 355666665432 2
Q ss_pred CcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEE
Q 017431 321 SQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 367 (371)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl 367 (371)
..++.+++++.++.+.+ ..+.|+++++++|++.+.+++.. |+|+
T Consensus 286 ~~~~~~~~ll~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 286 ADLQEALDFAAEGKVKP---MIETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred HHHHHHHHHHHcCCCcc---eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 46788889998888764 34789999999999999888776 7664
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an |
| >cd08290 ETR 2-enoyl thioester reductase (ETR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-37 Score=288.95 Aligned_cols=314 Identities=24% Similarity=0.315 Sum_probs=253.6
Q ss_pred cceEEeecCCCC---eEEEEeeCCCCCC-CeEEEEEeeeecCccccccccCCCCCC-C----CCcccccceeEEEEEeCC
Q 017431 2 CKAAVAWEPNKP---LVIEDVQVAPPQA-GEVRIKILFTALCHTDAYTWSGKDPEG-L----FPCILGHEAAGIVESVGE 72 (371)
Q Consensus 2 ~~a~~~~~~~~~---~~~~~~~~~~~~~-~eVlV~v~~~~i~~~D~~~~~g~~~~~-~----~p~v~G~e~~G~V~~~G~ 72 (371)
|||+++.+++.+ +.+++.|.|+|.+ ++|+||+.++++|+.|+..+.|..+.. . .|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 899999999876 8999999998887 999999999999999999888876432 2 577899999999999999
Q ss_pred CCCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccce
Q 017431 73 GVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSV 152 (371)
Q Consensus 73 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v 152 (371)
++..+++||+|++... . .|+|++|+.++.+.+
T Consensus 81 ~v~~~~~Gd~V~~~~~------------------------------~------------------~g~~~~~~~v~~~~~ 112 (341)
T cd08290 81 GVKSLKPGDWVIPLRP------------------------------G------------------LGTWRTHAVVPADDL 112 (341)
T ss_pred CCCCCCCCCEEEecCC------------------------------C------------------CccchheEeccHHHe
Confidence 9999999999985421 1 139999999999999
Q ss_pred EecCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh----hhHHHH
Q 017431 153 AKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP----KKFDRA 227 (371)
Q Consensus 153 ~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~----~~~~~~ 227 (371)
+++|+++++++++.+++.+.|||+++.....+++|++|||+|+ |.+|++++|+|++.|+ +++++.+++ ++.+.+
T Consensus 113 ~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~ 191 (341)
T cd08290 113 IKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERL 191 (341)
T ss_pred EeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHH
Confidence 9999999999999999999999999887788999999999987 9999999999999999 677766655 667888
Q ss_pred HhcCCcEEecCCCC-CchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchh-eee
Q 017431 228 KNFGVTEFVNPKDH-DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVT 305 (371)
Q Consensus 228 ~~~g~~~vi~~~~~-~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~ 305 (371)
+++|+++++++.+. ...+...+..++++++|+++||+|+.. ...++++++++ |+++.+|..... ...++... +.+
T Consensus 192 ~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~ 268 (341)
T cd08290 192 KALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGGKS-ATELARLLSPG-GTMVTYGGMSGQ-PVTVPTSLLIFK 268 (341)
T ss_pred HhcCCCEEEeCcccccccHHHHHHHHcCCCceEEEECcCcHh-HHHHHHHhCCC-CEEEEEeccCCC-CcccCHHHHhhC
Confidence 89999999887651 015666677766558999999999954 77899999996 999999864322 22333322 344
Q ss_pred ceEEEeeecCCCcc-------cCcHHHHHHHHHcCCCCCCCceeeee---ecccHHHHHHHHhCCCee-EEEEec
Q 017431 306 GRVWKGTAFGGFKS-------RSQVPWLVDKYMKKEIKVDEYVTHNM---TLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 306 ~~~~~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
+.++.++....+.. ...+..+++++.++.+.+. ...++ +++++++|++.+.+++.. |+|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 269 DITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAP--PVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred CceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCC--cccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 77777776543211 1246778888888887654 34556 999999999999887776 999875
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f |
| >cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-37 Score=281.81 Aligned_cols=300 Identities=28% Similarity=0.467 Sum_probs=249.7
Q ss_pred cceEEeecCC-CCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 2 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 2 ~~a~~~~~~~-~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
||+++..+++ +++++++++.|.+.+++|+|+|.++++|++|.+...|.......|.++|+|++|+|+++|++++.+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 80 (306)
T cd08258 1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVG 80 (306)
T ss_pred CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCC
Confidence 7899998766 349999999999999999999999999999999888876444567889999999999999999999999
Q ss_pred CEEeecCC-CCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCC
Q 017431 81 DHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 159 (371)
Q Consensus 81 d~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~ 159 (371)
|+|++.+. .+|+.|.+|..+....|.... ++|.. ..|+|++|+.++.+.++++|+++
T Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-------------------~~g~~~~~~~v~~~~~~~lp~~~ 138 (306)
T cd08258 81 DRVVSETTFSTCGRCPYCRRGDYNLCPHRK---GIGTQ-------------------ADGGFAEYVLVPEESLHELPENL 138 (306)
T ss_pred CEEEEccCcCCCCCCcchhCcCcccCCCCc---eeeec-------------------CCCceEEEEEcchHHeEECcCCC
Confidence 99998774 679999999999998887532 12211 12499999999999999999999
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEE--cCChhhHHHHHhcCCcEEec
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGI--DIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v--~~~~~~~~~~~~~g~~~vi~ 237 (371)
++++|+ ++..+++||+++....+++++++|||.|+|.+|.+++++|+.+|+ +|+++ ++++++.++++++|++++ +
T Consensus 139 ~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~ 215 (306)
T cd08258 139 SLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-N 215 (306)
T ss_pred CHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-C
Confidence 999887 677888999999888999999999998889999999999999999 67666 334567888899999877 7
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecC
Q 017431 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFG 315 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~ 315 (371)
+.. .++.+.+.+.+++ ++|+++|++|+...+...+++|+++ |+++.+|... .....++...++ +++++.|+.++
T Consensus 216 ~~~--~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~i~g~~~~ 291 (306)
T cd08258 216 GGE--EDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGIFG-PLAASIDVERIIQKELSVIGSRSS 291 (306)
T ss_pred CCc--CCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccC-CCCcccCHHHHhhcCcEEEEEecC
Confidence 655 6677788887776 8999999998767799999999996 9999998854 223444444443 58999998875
Q ss_pred CCcccCcHHHHHHHHHcC
Q 017431 316 GFKSRSQVPWLVDKYMKK 333 (371)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~ 333 (371)
. +++++++++++++|
T Consensus 292 ~---~~~~~~~~~~~~~~ 306 (306)
T cd08258 292 T---PASWETALRLLASG 306 (306)
T ss_pred c---hHhHHHHHHHHhcC
Confidence 4 46899999998764
|
This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous |
| >TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-37 Score=286.04 Aligned_cols=308 Identities=18% Similarity=0.242 Sum_probs=244.0
Q ss_pred ceEEeecC---CCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCC
Q 017431 3 KAAVAWEP---NKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEV 77 (371)
Q Consensus 3 ~a~~~~~~---~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~ 77 (371)
||+++.++ +++ +++.++|.|+|+++||+|||+++++|+.|...+.|..+...+|.++|+|++|+|+++|++++.|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (336)
T TIGR02817 1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLF 80 (336)
T ss_pred CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 57888886 544 8888999999999999999999999999998888876555678899999999999999999999
Q ss_pred CCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCC
Q 017431 78 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 157 (371)
Q Consensus 78 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~ 157 (371)
++||+|+.... .. .. |+|++|++++.+.++++|+
T Consensus 81 ~~Gd~V~~~~~---------------------------~~-~~------------------g~~~~~~~v~~~~~~~ip~ 114 (336)
T TIGR02817 81 KPGDEVWYAGD---------------------------ID-RP------------------GSNAEFHLVDERIVGHKPK 114 (336)
T ss_pred CCCCEEEEcCC---------------------------CC-CC------------------CcccceEEEcHHHcccCCC
Confidence 99999974310 00 12 3999999999999999999
Q ss_pred CCCcchhhhccccchhhhhhhhhcCCCCC-----CCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhc
Q 017431 158 QAPLDKVCLLGCGVPTGLGAVWNTAKVEP-----GSIVAVFGL-GTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNF 230 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-----g~~VlI~Ga-g~vG~~ai~la~~~-g~~~v~~v~~~~~~~~~~~~~ 230 (371)
++++++++.+++++.|||+++....++++ |++|||+|+ |++|++++|+|+.+ |+ +|+++++++++.+.++++
T Consensus 115 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~ 193 (336)
T TIGR02817 115 SLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLEL 193 (336)
T ss_pred CCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHc
Confidence 99999999999999999999888888877 999999987 99999999999998 99 899998989999999999
Q ss_pred CCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEE
Q 017431 231 GVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVW 309 (371)
Q Consensus 231 g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~ 309 (371)
|+++++++.. ++...+.+..++++|+++|++++...+...+++++++ |+++.++.. ..++ ...+. ++.++
T Consensus 194 g~~~~~~~~~---~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-G~~v~~~~~---~~~~--~~~~~~~~~~~ 264 (336)
T TIGR02817 194 GAHHVIDHSK---PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQ-GRFALIDDP---AELD--ISPFKRKSISL 264 (336)
T ss_pred CCCEEEECCC---CHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccC-CEEEEEccc---cccc--chhhhhcceEE
Confidence 9999887543 4666666654348999999987667799999999996 999988532 1122 22222 12333
Q ss_pred EeeecC--CCcc-------cCcHHHHHHHHHcCCCCCCCceeeee---ecccHHHHHHHHhCCCee-EEEEe
Q 017431 310 KGTAFG--GFKS-------RSQVPWLVDKYMKKEIKVDEYVTHNM---TLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 310 ~g~~~~--~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
.+..+. .... ...++.+++++.++.+++. +.+.+ +++++++|++.+.+++.. |++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 265 HWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTT--LAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred EEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeecc--chhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 332221 0000 1346778899999987643 33444 468999999999988776 88774
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model. |
| >cd08244 MDR_enoyl_red Possible enoyl reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-36 Score=280.74 Aligned_cols=312 Identities=23% Similarity=0.265 Sum_probs=254.9
Q ss_pred cceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC---CCCCcccccceeEEEEEeCCCCCC
Q 017431 2 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE---GLFPCILGHEAAGIVESVGEGVTE 76 (371)
Q Consensus 2 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~---~~~p~v~G~e~~G~V~~~G~~v~~ 76 (371)
|||+++.+++.+ +++.+.+.|.+.+++|+|++.++++|+.|+....|..+. ..+|.++|||++|+|+++|++++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 799999887654 777788877789999999999999999999888776432 346788999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecC
Q 017431 77 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 156 (371)
Q Consensus 77 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP 156 (371)
+++||+|++... ..+ |+|++|+.++.+.++++|
T Consensus 81 ~~~Gd~V~~~~~-----------------------------~~~------------------g~~~~~~~v~~~~~~~lp 113 (324)
T cd08244 81 AWLGRRVVAHTG-----------------------------RAG------------------GGYAELAVADVDSLHPVP 113 (324)
T ss_pred CCCCCEEEEccC-----------------------------CCC------------------ceeeEEEEEchHHeEeCC
Confidence 999999985421 012 399999999999999999
Q ss_pred CCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE
Q 017431 157 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 235 (371)
Q Consensus 157 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v 235 (371)
+++++++++.+++.+.||| ++....+++++++|||+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++|++.+
T Consensus 114 ~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~ 191 (324)
T cd08244 114 DGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVA 191 (324)
T ss_pred CCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEE
Confidence 9999999999999999995 4667889999999999986 9999999999999999 79999999999999999999888
Q ss_pred ecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchh-eeeceEEEeee
Q 017431 236 VNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTA 313 (371)
Q Consensus 236 i~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~~~g~~ 313 (371)
++..+ .++.+.+.+.+++ ++|+++|++|+.. ...++++++.+ |+++.+|...... ..++... +.++.++.++.
T Consensus 192 ~~~~~--~~~~~~~~~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~ 266 (324)
T cd08244 192 VDYTR--PDWPDQVREALGGGGVTVVLDGVGGAI-GRAALALLAPG-GRFLTYGWASGEW-TALDEDDARRRGVTVVGLL 266 (324)
T ss_pred EecCC--ccHHHHHHHHcCCCCceEEEECCChHh-HHHHHHHhccC-cEEEEEecCCCCC-CccCHHHHhhCCcEEEEee
Confidence 87765 5677778887777 8999999999865 79999999996 9999998753222 2333222 33467777665
Q ss_pred cCCCc---ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 314 FGGFK---SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 314 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
..... ..+.+...++++.++.+.. .+.+.|+++++++|++.+.+++.. |+++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 267 GVQAERGGLRALEARALAEAAAGRLVP--VVGQTFPLERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCccC--ccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence 53321 1235667888888888753 467899999999999999988776 998864
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr |
| >cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-36 Score=279.13 Aligned_cols=330 Identities=25% Similarity=0.387 Sum_probs=266.8
Q ss_pred cceEEeecCC--CCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCC-CCCcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPN--KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~--~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~-~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
|||+++...+ +.+++.+.+.|.+.+++++|++.++++|++|++...|.++.. ..|.++|||++|+|+++|++++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK 80 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence 8999999775 338888988888999999999999999999999888765433 4678899999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||+|++.....|+.+.+|..+.+.. .|.. .+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~---------~~~~-~~------------------g~~~~~~~~~~~~~~~lp~~ 132 (336)
T cd08276 81 VGDRVVPTFFPNWLDGPPTAEDEASA---------LGGP-ID------------------GVLAEYVVLPEEGLVRAPDH 132 (336)
T ss_pred CCCEEEEecccccccccccccccccc---------cccc-cC------------------ceeeeEEEecHHHeEECCCC
Confidence 99999988776666554332222111 1111 22 39999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
+++.+++.+++.+.+||+++.....+++|++|+|+|+|++|++++++|+++|+ +|+++++++++.+.++++|.+.+++.
T Consensus 133 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 211 (336)
T cd08276 133 LSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINY 211 (336)
T ss_pred CCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcC
Confidence 99999999999999999998888899999999999889999999999999999 79999999999999999999888876
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchh-eeeceEEEeeecCC
Q 017431 239 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFGG 316 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~ 316 (371)
.. ..++...+.+.+++ ++|+++|++++ ..+..++++++++ |+++.+|...... ....... +.++.++.++....
T Consensus 212 ~~-~~~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 287 (336)
T cd08276 212 RT-TPDWGEEVLKLTGGRGVDHVVEVGGP-GTLAQSIKAVAPG-GVISLIGFLSGFE-APVLLLPLLTKGATLRGIAVGS 287 (336)
T ss_pred Cc-ccCHHHHHHHHcCCCCCcEEEECCCh-HHHHHHHHhhcCC-CEEEEEccCCCCc-cCcCHHHHhhcceEEEEEecCc
Confidence 54 14567778888887 99999999986 5689999999996 9999998754321 1222222 34478888876543
Q ss_pred CcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 317 FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
...++++++++.++.+.. ..++.|++++++++++.+.+++.. |+++++
T Consensus 288 ---~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 336 (336)
T cd08276 288 ---RAQFEAMNRAIEAHRIRP--VIDRVFPFEEAKEAYRYLESGSHFGKVVIRV 336 (336)
T ss_pred ---HHHHHHHHHHHHcCCccc--ccCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 347888889998877653 356889999999999999887776 888753
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >PTZ00354 alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-36 Score=281.01 Aligned_cols=313 Identities=22% Similarity=0.282 Sum_probs=254.2
Q ss_pred CcceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCC
Q 017431 1 MCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEV 77 (371)
Q Consensus 1 ~~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~ 77 (371)
||||+++.+++.. +++.+.+.|++.+++|+|||.++++|+.|+....|..+. ...|.++|+|++|+|+++|++++.+
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~ 80 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF 80 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 8999999998863 778888888899999999999999999999888876532 2456789999999999999999999
Q ss_pred CCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCC
Q 017431 78 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 157 (371)
Q Consensus 78 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~ 157 (371)
++||+|+... .+ |+|++|++++.+.++++|+
T Consensus 81 ~~Gd~V~~~~-------------------------------~~------------------g~~~~~~~v~~~~~~~ip~ 111 (334)
T PTZ00354 81 KEGDRVMALL-------------------------------PG------------------GGYAEYAVAHKGHVMHIPQ 111 (334)
T ss_pred CCCCEEEEec-------------------------------CC------------------CceeeEEEecHHHcEeCCC
Confidence 9999997431 12 3999999999999999999
Q ss_pred CCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEe
Q 017431 158 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 236 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi 236 (371)
++++.+++.+++++.+||+++.....+++|++|||+|+ |.+|++++++|+++|+ +++.+.+++++.+.++++|++.++
T Consensus 112 ~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 190 (334)
T PTZ00354 112 GYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIILI 190 (334)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEE
Confidence 99999999999999999999888889999999999987 9999999999999999 666788889999999999998888
Q ss_pred cCCCCCch-HHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCccc-ccchheee-ceEEEee
Q 017431 237 NPKDHDKP-IQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS-TRPFQLVT-GRVWKGT 312 (371)
Q Consensus 237 ~~~~~~~~-~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~-~~~~~~~~-~~~~~g~ 312 (371)
+... .+ +...+.+.+++ ++|+++|++++ ..+..++++++++ |+++.+|.... ..+. ++...+.. ..++.++
T Consensus 191 ~~~~--~~~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-g~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 265 (334)
T PTZ00354 191 RYPD--EEGFAPKVKKLTGEKGVNLVLDCVGG-SYLSETAEVLAVD-GKWIVYGFMGG-AKVEKFNLLPLLRKRASIIFS 265 (334)
T ss_pred ecCC--hhHHHHHHHHHhCCCCceEEEECCch-HHHHHHHHHhccC-CeEEEEecCCC-CcccccCHHHHHhhCCEEEee
Confidence 7755 33 67778888776 99999999987 6689999999996 99999986432 2222 33333222 4466666
Q ss_pred ecCCCccc-------CcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecC
Q 017431 313 AFGGFKSR-------SQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 370 (371)
Q Consensus 313 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~ 370 (371)
........ ..++.+++++.++.+++ .+.+.+++++++++++.+.+++.. |+++.+.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~ 329 (334)
T PTZ00354 266 TLRSRSDEYKADLVASFEREVLPYMEEGEIKP--IVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVN 329 (334)
T ss_pred eccccchhhhHHHHHHHHHHHHHHHHCCCccC--ccccEEcHHHHHHHHHHHHhCCCCceEEEecC
Confidence 54331110 12356778888888664 367889999999999999887665 9998765
|
|
| >cd08249 enoyl_reductase_like enoyl_reductase_like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-36 Score=281.53 Aligned_cols=315 Identities=24% Similarity=0.307 Sum_probs=248.1
Q ss_pred cceEEeecCC-CCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 2 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 2 ~~a~~~~~~~-~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
|||+++..++ +.++++++|.|+++++||+|++.++++|++|+....+.. ...+|.++|||++|+|+.+|++++.+++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~G 79 (339)
T cd08249 1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKVG 79 (339)
T ss_pred CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCCC
Confidence 8999999995 338999999999999999999999999999998876654 22357789999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|+|+......|+ + .. .+ |+|++|+.++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~------------~--------~~---~~------------------g~~~~~~~v~~~~~~~ip~~~~ 118 (339)
T cd08249 80 DRVAGFVHGGNP------------N--------DP---RN------------------GAFQEYVVADADLTAKIPDNIS 118 (339)
T ss_pred CEEEEEeccccC------------C--------CC---CC------------------CcccceEEechhheEECCCCCC
Confidence 999876432221 0 00 22 3999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCC----------CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKV----------EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 229 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~----------~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~ 229 (371)
+++++.+++.+.+||+++.+..++ .++++|||+|+ |.+|++++++|+++|+ +|+.+. ++++.+.+++
T Consensus 119 ~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~ 196 (339)
T cd08249 119 FEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKS 196 (339)
T ss_pred HHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHh
Confidence 999999999999999998766554 78999999998 8999999999999999 777776 5688888899
Q ss_pred cCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhcc--CCceEEEEccCCCCCcccccchheeece
Q 017431 230 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK--GWGTSVIVGVAASGQEISTRPFQLVTGR 307 (371)
Q Consensus 230 ~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~--~~G~iv~~g~~~~~~~~~~~~~~~~~~~ 307 (371)
+|++++++..+ .++.+.+++.+++++|+++|++|++..+..+++++++ + |+++.+|...... .+. ... ...
T Consensus 197 ~g~~~v~~~~~--~~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~-g~~v~~g~~~~~~--~~~-~~~-~~~ 269 (339)
T cd08249 197 LGADAVFDYHD--PDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGG-GKLVSLLPVPEET--EPR-KGV-KVK 269 (339)
T ss_pred cCCCEEEECCC--chHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCC-CEEEEecCCCccc--cCC-CCc-eEE
Confidence 99999988766 6677778777766899999999986679999999999 8 9999998753221 111 111 111
Q ss_pred EEEeeecC------CCcccCcHHHHHHHHHcCCCCCCCceeeeee--cccHHHHHHHHhCCC-ee-EEEEec
Q 017431 308 VWKGTAFG------GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMT--LGEINEAFRYMHGGD-CL-RCVLKM 369 (371)
Q Consensus 308 ~~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~A~~~~~~~~-~~-kvvl~~ 369 (371)
.+....+. .......+..+++++.++.+.+.+ ..+++ ++++++|++.+.+++ .. |+|+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 270 FVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHP--VRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred EEEeeeecccccccccchHHHHHHHHHHHHcCCccCCC--ceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 11112111 111123466788899899887653 35566 999999999999888 65 999875
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de |
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=281.29 Aligned_cols=311 Identities=23% Similarity=0.285 Sum_probs=252.8
Q ss_pred CcceEEeecCCC----CeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCC
Q 017431 1 MCKAAVAWEPNK----PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVT 75 (371)
Q Consensus 1 ~~~a~~~~~~~~----~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~ 75 (371)
+|||+++.+++. ++++++.+.|.+.++||+|||.++++|+.|+....|.++. ..+|.++|+|++|+|+++|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~ 80 (329)
T cd08250 1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT 80 (329)
T ss_pred CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence 599999998876 4999999999999999999999999999999988887643 35788999999999999999999
Q ss_pred CCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEec
Q 017431 76 EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI 155 (371)
Q Consensus 76 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~l 155 (371)
.+++||+|++.. . |+|++|++++.+.++++
T Consensus 81 ~~~~Gd~V~~~~--------------------------------~------------------g~~~s~~~v~~~~~~~i 110 (329)
T cd08250 81 DFKVGDAVATMS--------------------------------F------------------GAFAEYQVVPARHAVPV 110 (329)
T ss_pred CCCCCCEEEEec--------------------------------C------------------cceeEEEEechHHeEEC
Confidence 999999998531 1 39999999999999999
Q ss_pred CCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE
Q 017431 156 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 234 (371)
Q Consensus 156 P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~ 234 (371)
|++ ..+++.++.++.+||+++.+..++++|++|||+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++|++.
T Consensus 111 p~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 187 (329)
T cd08250 111 PEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDR 187 (329)
T ss_pred CCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCce
Confidence 997 35677888999999999888889999999999986 9999999999999999 7888888889899999999988
Q ss_pred EecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCC---------Ccccccchheee
Q 017431 235 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG---------QEISTRPFQLVT 305 (371)
Q Consensus 235 vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~---------~~~~~~~~~~~~ 305 (371)
+++..+ ..+.+.+.+..++++|+++|++|+ ..+...+++++++ |+++.+|..... ....++...+.+
T Consensus 188 v~~~~~--~~~~~~~~~~~~~~vd~v~~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (329)
T cd08250 188 PINYKT--EDLGEVLKKEYPKGVDVVYESVGG-EMFDTCVDNLALK-GRLIVIGFISGYQSGTGPSPVKGATLPPKLLAK 263 (329)
T ss_pred EEeCCC--ccHHHHHHHhcCCCCeEEEECCcH-HHHHHHHHHhccC-CeEEEEecccCCcccCcccccccccccHHHhhc
Confidence 887655 455566666554489999999997 6689999999996 999999864321 011222222344
Q ss_pred ceEEEeeecCCCc--ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 306 GRVWKGTAFGGFK--SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 306 ~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
+.++.++.+..+. ..+.+..+++++.++.+++.....+.|+++++++|++.+.+++.. |++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 264 SASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred CceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 6777776543221 123467788889888877643345679999999999999987776 88864
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-36 Score=277.34 Aligned_cols=312 Identities=22% Similarity=0.258 Sum_probs=243.3
Q ss_pred cceEEeecCCC--CeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCC-CCCcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~--~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~-~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
|||+++.++++ ++++++.|.|.+.+++|+|++.++++|++|+..+.|..+.. .+|.++|||++|+|+++ .++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~ 78 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR 78 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence 79999999986 69999999999999999999999999999999988876432 45788999999999999 456899
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||+|+..+. ..|.. .+ |+|++|++++.+.++++|++
T Consensus 79 ~Gd~V~~~~~------------------------~~g~~-~~------------------g~~~~~~~v~~~~~~~lp~~ 115 (325)
T cd05280 79 EGDEVLVTGY------------------------DLGMN-TD------------------GGFAEYVRVPADWVVPLPEG 115 (325)
T ss_pred CCCEEEEccc------------------------ccCCC-CC------------------ceeEEEEEEchhhEEECCCC
Confidence 9999986421 01111 22 39999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcC--CCC-CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTA--KVE-PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 234 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~--~~~-~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~ 234 (371)
+++++|+.+++.+.+||.++.... ++. .+++|||+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++|+++
T Consensus 116 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 194 (325)
T cd05280 116 LSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASE 194 (325)
T ss_pred CCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcE
Confidence 999999999999999999875544 335 4579999998 9999999999999999 7999999999999999999988
Q ss_pred EecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEee
Q 017431 235 FVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGT 312 (371)
Q Consensus 235 vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~ 312 (371)
+++..+ . ...+.+...+ ++|+++|++++ ..+..++++++++ |+++.+|..... ...++...+ .++.++.++
T Consensus 195 ~~~~~~--~--~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~ 267 (325)
T cd05280 195 VLDRED--L--LDESKKPLLKARWAGAIDTVGG-DVLANLLKQTKYG-GVVASCGNAAGP-ELTTTVLPFILRGVSLLGI 267 (325)
T ss_pred EEcchh--H--HHHHHHHhcCCCccEEEECCch-HHHHHHHHhhcCC-CEEEEEecCCCC-ccccccchheeeeeEEEEE
Confidence 887654 1 1223333444 89999999998 5699999999996 999999875322 224444444 457788776
Q ss_pred ecCCCcc---cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 313 AFGGFKS---RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 313 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
....... ...++.+.+++..+.. +.+.++|+++++++|++.+.+++.. |+|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 268 DSVNCPMELRKQVWQKLATEWKPDLL---EIVVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred EeecCchhHHHHHHHHHHHHHhcCCc---cceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 6543211 0122334444444422 2367899999999999999988876 988864
|
Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so |
| >cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=272.53 Aligned_cols=297 Identities=21% Similarity=0.237 Sum_probs=241.2
Q ss_pred cceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 017431 2 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 79 (371)
Q Consensus 2 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~ 79 (371)
||++++.+.+ | +++.+.|.|.+.++||+|++.++++|+.|++...+. ..|.++|||++|+|+++|++++.|++
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~----~~~~~~g~e~~G~v~~~G~~v~~~~~ 75 (305)
T cd08270 1 MRALVVDPDA-PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER----PDGAVPGWDAAGVVERAAADGSGPAV 75 (305)
T ss_pred CeEEEEccCC-CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC----CCCCcccceeEEEEEEeCCCCCCCCC
Confidence 7899998754 4 777899999999999999999999999999876522 23568999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCC
Q 017431 80 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 159 (371)
Q Consensus 80 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~ 159 (371)
||+|+... .+ |+|++|+.++.+.++++|+++
T Consensus 76 Gd~V~~~~-------------------------------~~------------------g~~~~~~~v~~~~~~~ip~~~ 106 (305)
T cd08270 76 GARVVGLG-------------------------------AM------------------GAWAELVAVPTGWLAVLPDGV 106 (305)
T ss_pred CCEEEEec-------------------------------CC------------------cceeeEEEEchHHeEECCCCC
Confidence 99997431 12 399999999999999999999
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
++++++.+++.+.+||+++...... +|++|+|+|+ |.+|.+++++|+.+|+ +|+.+++++++.+.++++|++..+..
T Consensus 107 ~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 184 (305)
T cd08270 107 SFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVG 184 (305)
T ss_pred CHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEec
Confidence 9999999999999999988666555 5999999988 9999999999999999 89999899999999999998765533
Q ss_pred CCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheee---ceEEEeeecC
Q 017431 239 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT---GRVWKGTAFG 315 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~---~~~~~g~~~~ 315 (371)
.. +..++++|+++|++|+. .+..++++++.+ |+++.+|... .....++...+.. +.++.++.+.
T Consensus 185 ~~----------~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (305)
T cd08270 185 GS----------ELSGAPVDLVVDSVGGP-QLARALELLAPG-GTVVSVGSSS-GEPAVFNPAAFVGGGGGRRLYTFFLY 251 (305)
T ss_pred cc----------cccCCCceEEEECCCcH-HHHHHHHHhcCC-CEEEEEeccC-CCcccccHHHHhcccccceEEEEEcc
Confidence 22 12224799999999985 589999999996 9999998753 2223333333332 6777776654
Q ss_pred C-CcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 316 G-FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 316 ~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
. ......++.+++++.++++++. +.++++++++++|++.+.+++.. |+++.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 252 DGEPLAADLARLLGLVAAGRLDPR--IGWRGSWTEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred CHHHHHHHHHHHHHHHHCCCccce--eccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 2 1123467788999999998743 66899999999999999887776 998864
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-35 Score=272.59 Aligned_cols=311 Identities=25% Similarity=0.393 Sum_probs=248.5
Q ss_pred cceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 017431 2 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 79 (371)
Q Consensus 2 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~ 79 (371)
||++++...+.+ +++.+.+.|.+.+++|+||+.++++|+.|+....|..+....|.++|||++|+|+++|+ ..+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~ 78 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP 78 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence 789999877643 77888888889999999999999999999999888765556688999999999999995 57999
Q ss_pred CCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCC
Q 017431 80 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 159 (371)
Q Consensus 80 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~ 159 (371)
||+|++.... ++.. .+ |+|++|+.++.+.++++|+++
T Consensus 79 Gd~V~~~~~~------------------------~~~~-~~------------------g~~~~~~~~~~~~~~~ip~~~ 115 (320)
T cd08243 79 GQRVATAMGG------------------------MGRT-FD------------------GSYAEYTLVPNEQVYAIDSDL 115 (320)
T ss_pred CCEEEEecCC------------------------CCCC-CC------------------cccceEEEcCHHHcEeCCCCC
Confidence 9999865310 0000 12 399999999999999999999
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
++++++.+++++.+||.++....++++|++|||+|+ |.+|++++++|+++|+ +|+++++++++.+.++++|++++++.
T Consensus 116 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 194 (320)
T cd08243 116 SWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID 194 (320)
T ss_pred CHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec
Confidence 999999999999999999988888999999999988 9999999999999999 79999899999999999999887754
Q ss_pred CCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcc----cccchheeeceEEEeeec
Q 017431 239 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI----STRPFQLVTGRVWKGTAF 314 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~----~~~~~~~~~~~~~~g~~~ 314 (371)
. .++.+.+.+. ++++|+++|++++ ..+..++++++++ |+++.+|........ ......+.++.++.++..
T Consensus 195 -~--~~~~~~i~~~-~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (320)
T cd08243 195 -D--GAIAEQLRAA-PGGFDKVLELVGT-ATLKDSLRHLRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSS 268 (320)
T ss_pred -C--ccHHHHHHHh-CCCceEEEECCCh-HHHHHHHHHhccC-CEEEEEccCCCCcccCCcchhhhhhhccceEEEecch
Confidence 3 3566667777 4499999999998 5699999999996 999999864221111 111111233566665543
Q ss_pred CCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEE
Q 017431 315 GGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 367 (371)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl 367 (371)
.... ...+..+++++.++.+++ ..++.|+++++++|++.+.+++.. |+++
T Consensus 269 ~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 269 GDVP-QTPLQELFDFVAAGHLDI--PPSKVFTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred hhhh-HHHHHHHHHHHHCCceec--ccccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 2211 235777889998988764 356889999999999999887765 7765
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-36 Score=275.14 Aligned_cols=301 Identities=28% Similarity=0.396 Sum_probs=230.0
Q ss_pred eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCC----CCcccccceeEE---EEEeC-CCCCCCCCCCEEee
Q 017431 14 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL----FPCILGHEAAGI---VESVG-EGVTEVQPGDHVIP 85 (371)
Q Consensus 14 ~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~----~p~v~G~e~~G~---V~~~G-~~v~~~~~Gd~V~~ 85 (371)
....+.++|.|++++++|++.++++|+.|+.+..|.+.... +|.+++.++.|+ +...| ..+..+..||++..
T Consensus 20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~ 99 (347)
T KOG1198|consen 20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA 99 (347)
T ss_pred EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee
Confidence 55668999999999999999999999999999999876554 776655555555 44444 22344555655542
Q ss_pred cCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCcchhh
Q 017431 86 CYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVC 165 (371)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~~~aa 165 (371)
. ...|+|+||+.+|...++++|+++++++||
T Consensus 100 ~-------------------------------------------------~~~g~~aey~v~p~~~~~~~P~~l~~~~aa 130 (347)
T KOG1198|consen 100 F-------------------------------------------------LSSGGLAEYVVVPEKLLVKIPESLSFEEAA 130 (347)
T ss_pred c-------------------------------------------------cCCCceeeEEEcchhhccCCCCccChhhhh
Confidence 2 222499999999999999999999999999
Q ss_pred hccccchhhhhhhhhcC------CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 166 LLGCGVPTGLGAVWNTA------KVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 166 ~~~~~~~ta~~~l~~~~------~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
++|.++.|||.+++... ++++|++|||+|+ |++|++|+|+|++.|+ ..+++.+++++.++++++|+++++|+
T Consensus 131 ~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy 209 (347)
T KOG1198|consen 131 ALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDY 209 (347)
T ss_pred cCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecC
Confidence 99999999999999999 9999999999977 8999999999999996 55666688999999999999999999
Q ss_pred CCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccch--h-eee-----ceEEE
Q 017431 239 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF--Q-LVT-----GRVWK 310 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~--~-~~~-----~~~~~ 310 (371)
++ .++.+.+++.+.++||+||||+|+. .......++... |+...++.... ........ + ... ...+.
T Consensus 210 ~~--~~~~e~~kk~~~~~~DvVlD~vg~~-~~~~~~~~l~~~-g~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (347)
T KOG1198|consen 210 KD--ENVVELIKKYTGKGVDVVLDCVGGS-TLTKSLSCLLKG-GGGAYIGLVGD-ELANYKLDDLWQSANGIKLYSLGLK 284 (347)
T ss_pred CC--HHHHHHHHhhcCCCccEEEECCCCC-ccccchhhhccC-CceEEEEeccc-cccccccccchhhhhhhhheeeeee
Confidence 99 8999999999844999999999995 477777888875 65444433211 11111100 0 000 11111
Q ss_pred eeec---CCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecCC
Q 017431 311 GTAF---GGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQD 371 (371)
Q Consensus 311 g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~d 371 (371)
+... ......+.++.+.+++++++++ +.+.+.||++++.+|++.+.++... |+++++++
T Consensus 285 ~~~~~~~~~~~~~~~l~~l~~~ie~gkik--p~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~~ 347 (347)
T KOG1198|consen 285 GVNYRWLYFVPSAEYLKALVELIEKGKIK--PVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKDV 347 (347)
T ss_pred ccceeeeeecCCHHHHHHHHHHHHcCccc--CCcceeeeHHHHHHHHHHHhhcCCcceEEEEecC
Confidence 1111 1112346788899999999655 6688999999999999999987776 99998864
|
|
| >cd05282 ETR_like 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-35 Score=273.28 Aligned_cols=298 Identities=19% Similarity=0.283 Sum_probs=248.5
Q ss_pred eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCC
Q 017431 14 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECR 92 (371)
Q Consensus 14 ~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~ 92 (371)
+++++.|.|++.+++|+|++.++++|+.|...+.|.... ..+|.++|||++|+|+++|++++.+++||+|++.+.
T Consensus 14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~---- 89 (323)
T cd05282 14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG---- 89 (323)
T ss_pred EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC----
Confidence 677788899999999999999999999999988776543 246788999999999999999999999999985420
Q ss_pred CCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCcchhhhccccch
Q 017431 93 ECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP 172 (371)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~~~aa~~~~~~~ 172 (371)
+ |+|++|+.++.+.++++|+++++.+++.+++.+.
T Consensus 90 ---------------------------~------------------g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ 124 (323)
T cd05282 90 ---------------------------E------------------GTWQEYVVAPADDLIPVPDSISDEQAAMLYINPL 124 (323)
T ss_pred ---------------------------C------------------CcceeEEecCHHHeEECCCCCCHHHHHHHhccHH
Confidence 2 3999999999999999999999999999999999
Q ss_pred hhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHh
Q 017431 173 TGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVD 251 (371)
Q Consensus 173 ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~ 251 (371)
+||+++.....+.+|++|||+|+ |.+|++++++|+++|+ +++++.+++++.+.++++|+++++++.. ..+...+.+
T Consensus 125 ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~ 201 (323)
T cd05282 125 TAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSP--EDLAQRVKE 201 (323)
T ss_pred HHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccc--hhHHHHHHH
Confidence 99999888888999999999988 8999999999999999 7888888888899999999999988765 567778888
Q ss_pred hcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecCCCcc-------cCc
Q 017431 252 LTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKS-------RSQ 322 (371)
Q Consensus 252 ~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~-------~~~ 322 (371)
.+++ ++|+++||+|+.. ....+++++++ |+++.+|..... ...++...+. ++.++.++.+..+.. ...
T Consensus 202 ~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (323)
T cd05282 202 ATGGAGARLALDAVGGES-ATRLARSLRPG-GTLVNYGLLSGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQET 278 (323)
T ss_pred HhcCCCceEEEECCCCHH-HHHHHHhhCCC-CEEEEEccCCCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHH
Confidence 8887 9999999999955 67889999996 999999875432 2344444444 577777776544321 124
Q ss_pred HHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 323 VPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
+..+++++.++.+.+ .+++.|+++++++|++.+.+++.. |++++
T Consensus 279 ~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 279 FAEVIKLVEAGVLTT--PVGAKFPLEDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred HHHHHHHHhCCCccc--CccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence 667888888888764 357889999999999999987766 88763
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman |
| >cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=268.26 Aligned_cols=301 Identities=24% Similarity=0.311 Sum_probs=241.3
Q ss_pred cCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccc-cCCCCC--CCCCcccccceeEEEEEeCCCCCCCCCCCEEee
Q 017431 9 EPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTW-SGKDPE--GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIP 85 (371)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~-~g~~~~--~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd~V~~ 85 (371)
+++. +++.+++.|++.++||+|++.++++|+.|+..+ .|.... ...|.++|+|++|+|+++|++++.+++||+|++
T Consensus 3 ~~~~-~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~ 81 (312)
T cd08269 3 GPGR-FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAG 81 (312)
T ss_pred CCCe-eEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEE
Confidence 4444 999999999999999999999999999999887 665422 124778999999999999999999999999985
Q ss_pred cCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCcchhh
Q 017431 86 CYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVC 165 (371)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~~~aa 165 (371)
.+ .|+|++|+.++.+.++++|+++ ..++
T Consensus 82 ~~--------------------------------------------------~g~~~~~~~v~~~~~~~lP~~~--~~~~ 109 (312)
T cd08269 82 LS--------------------------------------------------GGAFAEYDLADADHAVPLPSLL--DGQA 109 (312)
T ss_pred ec--------------------------------------------------CCcceeeEEEchhheEECCCch--hhhH
Confidence 32 1399999999999999999998 2333
Q ss_pred hccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchH
Q 017431 166 LLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPI 245 (371)
Q Consensus 166 ~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~ 245 (371)
....+++++++++. ..+++++++|||+|+|.+|.+++++|+.+|++.|+++++.+++.++++++|++++++... ..+
T Consensus 110 ~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~ 186 (312)
T cd08269 110 FPGEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDS--EAI 186 (312)
T ss_pred HhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCC--cCH
Confidence 22367888998875 788999999999988999999999999999944999989999999999999988887655 667
Q ss_pred HHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchh-eeeceEEEeeecCCC-cccCc
Q 017431 246 QQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFGGF-KSRSQ 322 (371)
Q Consensus 246 ~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~-~~~~~ 322 (371)
.+.+.+.+++ ++|+++||+|+.......+++|+++ |+++.+|... .....++... ..++..+.++..... ...+.
T Consensus 187 ~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-g~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (312)
T cd08269 187 VERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQ-DGPRPVPFQTWNWKGIDLINAVERDPRIGLEG 264 (312)
T ss_pred HHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCC-CCCcccCHHHHhhcCCEEEEecccCccchhhH
Confidence 7888888877 9999999998877789999999996 9999998643 2222333222 223555555433221 22357
Q ss_pred HHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCe--eEEEE
Q 017431 323 VPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDC--LRCVL 367 (371)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~--~kvvl 367 (371)
++.+++++.++.+++.+.+.++|+++++++|++.+.+++. +|+++
T Consensus 265 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 265 MREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred HHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 8889999999988764456788999999999999988754 48886
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i |
| >TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=268.55 Aligned_cols=311 Identities=23% Similarity=0.269 Sum_probs=240.0
Q ss_pred ceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 017431 3 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQP 79 (371)
Q Consensus 3 ~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~~~ 79 (371)
||+++...+.| ++++++|+|.+.+++|+||+.++++|++|+..+.|.++. ..+|.++|||++|+|++ +.++.|++
T Consensus 1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~ 78 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE 78 (323)
T ss_pred CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence 68888888775 789999999999999999999999999999988887643 24688899999999998 55678999
Q ss_pred CCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCC
Q 017431 80 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 159 (371)
Q Consensus 80 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~ 159 (371)
||+|++.+.. .|.. .+ |++++|+.++.+.++++|+++
T Consensus 79 Gd~V~~~~~~------------------------~~~~-~~------------------g~~~~~~~~~~~~~~~iP~~~ 115 (323)
T TIGR02823 79 GDEVIVTGYG------------------------LGVS-HD------------------GGYSQYARVPADWLVPLPEGL 115 (323)
T ss_pred CCEEEEccCC------------------------CCCC-CC------------------ccceEEEEEchhheEECCCCC
Confidence 9999864310 0100 12 399999999999999999999
Q ss_pred Ccchhhhccccchhhhhhhhhc--CCCCCCC-EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNT--AKVEPGS-IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 235 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~--~~~~~g~-~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v 235 (371)
++++++.+++.+.+||.++... ..+.+++ +|||+|+ |.+|++++++|+++|+ +++++++++++.+.++++|++++
T Consensus 116 ~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~ 194 (323)
T TIGR02823 116 SLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEV 194 (323)
T ss_pred CHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEE
Confidence 9999999999999998876433 3488898 9999998 9999999999999999 77777777888899999999888
Q ss_pred ecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeeec
Q 017431 236 VNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAF 314 (371)
Q Consensus 236 i~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~ 314 (371)
++..+ ... .+...+++++|+++||+|+. .+..++++++++ |+++.+|.... ...+.+...+ .++.++.++..
T Consensus 195 ~~~~~--~~~--~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~ 267 (323)
T TIGR02823 195 IDRED--LSP--PGKPLEKERWAGAVDTVGGH-TLANVLAQLKYG-GAVAACGLAGG-PDLPTTVLPFILRGVSLLGIDS 267 (323)
T ss_pred Ecccc--HHH--HHHHhcCCCceEEEECccHH-HHHHHHHHhCCC-CEEEEEcccCC-CCccccHHHHhhcceEEEEEec
Confidence 87654 222 34455544799999999985 589999999996 99999987532 2233322333 44777777654
Q ss_pred CCCcc---cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 315 GGFKS---RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 315 ~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
..... ...+..+.+++..+.++. . .+.|+++++++|++.+.+++.. |+++.+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~l~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 268 VYCPMALREAAWQRLATDLKPRNLES--I-TREITLEELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred cccCchhHHHHHHHHHHHhhcCCCcC--c-eeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence 32111 012344555665666542 2 4689999999999999988877 988763
|
This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc. |
| >cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=268.33 Aligned_cols=314 Identities=19% Similarity=0.261 Sum_probs=238.7
Q ss_pred cceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCC-CCCCCcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~-~~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
|||+++.+++++ +++++.|.|.+.++||+||+.++++|++|.....+... ...+|.++|||++|+|++.| ++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~ 78 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK 78 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence 899999988875 88999999999999999999999999999876643211 22458889999999999965 46799
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||+|+..+.. .|.. .+ |+|++|++++.+.++++|++
T Consensus 79 ~Gd~V~~~~~~------------------------~~~~-~~------------------g~~~~~~~v~~~~~~~~p~~ 115 (326)
T cd08289 79 PGDEVIVTSYD------------------------LGVS-HH------------------GGYSEYARVPAEWVVPLPKG 115 (326)
T ss_pred CCCEEEEcccc------------------------cCCC-CC------------------CcceeEEEEcHHHeEECCCC
Confidence 99999864320 1111 22 39999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcC--C-CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTA--K-VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 234 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~--~-~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~ 234 (371)
+++++++.+++.+.|||.++.... . ..++++|||+|+ |.+|++++|+|+.+|+ +|+++++++++.+.++++|++.
T Consensus 116 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 194 (326)
T cd08289 116 LTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKE 194 (326)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCE
Confidence 999999999999999988774332 2 345789999988 9999999999999999 8999999999999999999988
Q ss_pred EecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeee
Q 017431 235 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTA 313 (371)
Q Consensus 235 vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~ 313 (371)
+++.++ . ..+.+.+.+++++|+++|++|+ ..+..++++++++ |+++.+|... ....++....+ .++.++.++.
T Consensus 195 v~~~~~--~-~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~i~~g~~~-~~~~~~~~~~~~~~~~~~~~~~ 268 (326)
T cd08289 195 VIPREE--L-QEESIKPLEKQRWAGAVDPVGG-KTLAYLLSTLQYG-GSVAVSGLTG-GGEVETTVFPFILRGVNLLGID 268 (326)
T ss_pred EEcchh--H-HHHHHHhhccCCcCEEEECCcH-HHHHHHHHHhhcC-CEEEEEeecC-CCCCCcchhhhhhccceEEEEE
Confidence 887654 2 2444555544489999999998 5689999999996 9999998752 22233333333 3477777764
Q ss_pred cCCCcccCcHHHHHHHHHcCCCC---CCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 314 FGGFKSRSQVPWLVDKYMKKEIK---VDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
..... ......+++.+.. .+. ....+.++|+++++++|++.+.+++.. |+++++
T Consensus 269 ~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 269 SVECP-MELRRRIWRRLAT-DLKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred eEecC-chHHHHHHHHHHh-hcCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 32110 1122334443332 222 122357999999999999999988776 988864
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH |
| >cd08252 AL_MDR Arginate lyase and other MDR family members | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-34 Score=268.96 Aligned_cols=312 Identities=19% Similarity=0.199 Sum_probs=249.2
Q ss_pred cceEEeecCCCC-----eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 017431 2 CKAAVAWEPNKP-----LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE 76 (371)
Q Consensus 2 ~~a~~~~~~~~~-----~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~ 76 (371)
|||+++.+++++ ++++++|.|.+.+++|+|++.++++|++|+..+.+..+..++|.++|||++|+|+++|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~ 80 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL 80 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence 789999998874 666778888889999999999999999999888776654456778999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecC
Q 017431 77 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 156 (371)
Q Consensus 77 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP 156 (371)
+++||+|+..... . .+ |+|++|+.++.+.++++|
T Consensus 81 ~~~Gd~V~~~~~~-------------------------~---~~------------------g~~~~~~~v~~~~~~~ip 114 (336)
T cd08252 81 FKVGDEVYYAGDI-------------------------T---RP------------------GSNAEYQLVDERIVGHKP 114 (336)
T ss_pred CCCCCEEEEcCCC-------------------------C---CC------------------ccceEEEEEchHHeeeCC
Confidence 9999999753210 0 12 399999999999999999
Q ss_pred CCCCcchhhhccccchhhhhhhhhcCCCCC-----CCEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh
Q 017431 157 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEP-----GSIVAVFGL-GTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN 229 (371)
Q Consensus 157 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-----g~~VlI~Ga-g~vG~~ai~la~~~g-~~~v~~v~~~~~~~~~~~~ 229 (371)
+++++++++.+++.+.+||.++.+...+.+ |++|+|+|+ |++|++++++|+.+| + +|+++++++++.+++++
T Consensus 115 ~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~ 193 (336)
T cd08252 115 KSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKE 193 (336)
T ss_pred CCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHh
Confidence 999999999999999999999888888887 999999986 999999999999999 7 89999999999999999
Q ss_pred cCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceE
Q 017431 230 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRV 308 (371)
Q Consensus 230 ~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~ 308 (371)
+|++++++..+ .+.+.+.....+++|+++|++++...+..++++++.+ |+++.+|... . .++...+ .++.+
T Consensus 194 ~g~~~~~~~~~---~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~--~--~~~~~~~~~~~~~ 265 (336)
T cd08252 194 LGADHVINHHQ---DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQ-GHICLIVDPQ--E--PLDLGPLKSKSAS 265 (336)
T ss_pred cCCcEEEeCCc---cHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCC-CEEEEecCCC--C--cccchhhhcccce
Confidence 99988887653 3445555443338999999999767799999999996 9999998642 2 2233333 34566
Q ss_pred EEeeecCCC--cc-------cCcHHHHHHHHHcCCCCCCCc-eeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 309 WKGTAFGGF--KS-------RSQVPWLVDKYMKKEIKVDEY-VTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 309 ~~g~~~~~~--~~-------~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
+.+..+... .. ...+..+++++.++.+++... ....++++++++|++.+.+++.. |++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 266 FHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred EEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 665443221 00 123667888998998774311 12457999999999999988776 88764
|
This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil |
| >cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=271.88 Aligned_cols=311 Identities=23% Similarity=0.270 Sum_probs=239.4
Q ss_pred cceEEeecCCCC---eEEEEeeCCCCC-CCeEEEEEeeeecCccccccccCCCC---------------CCCCCcccccc
Q 017431 2 CKAAVAWEPNKP---LVIEDVQVAPPQ-AGEVRIKILFTALCHTDAYTWSGKDP---------------EGLFPCILGHE 62 (371)
Q Consensus 2 ~~a~~~~~~~~~---~~~~~~~~~~~~-~~eVlV~v~~~~i~~~D~~~~~g~~~---------------~~~~p~v~G~e 62 (371)
|||+++++++++ +++++.+.|.|. ++||+|+|.++++|++|+....|... ...+|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 899999998886 899999999994 99999999999999999998877421 23568899999
Q ss_pred eeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCccee
Q 017431 63 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFS 142 (371)
Q Consensus 63 ~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a 142 (371)
++|+|+++|++++++++||+|+..+. .+..|+|+
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~----------------------------------------------~~~~g~~~ 114 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVP----------------------------------------------PWSQGTHA 114 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecC----------------------------------------------CCCCccce
Confidence 99999999999999999999985431 01124999
Q ss_pred eeEEecccceEecCCCCCcchhhhccccchhhhhhhhhcCCCCC----CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE
Q 017431 143 QYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEP----GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI 217 (371)
Q Consensus 143 ~~~~v~~~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~----g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v 217 (371)
+|+.++.+.++++|+++++++++.+++.+.+||+++.+...+.+ |++|+|+|+ |++|++++++|+++|+ +|+++
T Consensus 115 ~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~ 193 (350)
T cd08248 115 EYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTT 193 (350)
T ss_pred eEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEE
Confidence 99999999999999999999999999999999999877777754 999999986 9999999999999999 67777
Q ss_pred cCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCC--Cc
Q 017431 218 DIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG--QE 295 (371)
Q Consensus 218 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~--~~ 295 (371)
.++ ++.+.++++|.+.+++... ..+.+.+... +++|+++|++|+. ....++++++++ |+++.+|..... ..
T Consensus 194 ~~~-~~~~~~~~~g~~~~~~~~~--~~~~~~l~~~--~~vd~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~ 266 (350)
T cd08248 194 CST-DAIPLVKSLGADDVIDYNN--EDFEEELTER--GKFDVILDTVGGD-TEKWALKLLKKG-GTYVTLVSPLLKNTDK 266 (350)
T ss_pred eCc-chHHHHHHhCCceEEECCC--hhHHHHHHhc--CCCCEEEECCChH-HHHHHHHHhccC-CEEEEecCCccccccc
Confidence 654 6778889999988887655 4444444331 3899999999985 689999999996 999999854211 11
Q ss_pred ccc--cch----heee-ceE-E-Eee---ecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee
Q 017431 296 IST--RPF----QLVT-GRV-W-KGT---AFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL 363 (371)
Q Consensus 296 ~~~--~~~----~~~~-~~~-~-~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~ 363 (371)
... ..+ .+.. ... + ... +.........+..+++++.++.+.+ .+++.|+++++++|++.+.+++..
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~ 344 (350)
T cd08248 267 LGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDGKIKP--VIDKVFPFEEVPEAYEKVESGHAR 344 (350)
T ss_pred ccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCEec--ccceeecHHHHHHHHHHHhcCCCc
Confidence 111 000 0000 000 0 000 0000112346888999999988653 367899999999999999887765
Q ss_pred -EEEEe
Q 017431 364 -RCVLK 368 (371)
Q Consensus 364 -kvvl~ 368 (371)
|++++
T Consensus 345 ~~vv~~ 350 (350)
T cd08248 345 GKTVIK 350 (350)
T ss_pred eEEEeC
Confidence 87763
|
Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-34 Score=248.21 Aligned_cols=298 Identities=23% Similarity=0.282 Sum_probs=240.1
Q ss_pred eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeC--CCCCCCCCCCEEeecCCCCC
Q 017431 14 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVG--EGVTEVQPGDHVIPCYQAEC 91 (371)
Q Consensus 14 ~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G--~~v~~~~~Gd~V~~~~~~~~ 91 (371)
|+++++++|+|+++|||+|..+.++++. +..+....+..--|.-+|..++|.++... |+...|++||.|+...
T Consensus 27 F~lee~~vp~p~~GqvLl~~~ylS~DPy-mRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~~---- 101 (340)
T COG2130 27 FRLEEVDVPEPGEGQVLLRTLYLSLDPY-MRGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGVS---- 101 (340)
T ss_pred ceeEeccCCCCCcCceEEEEEEeccCHH-HeecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEecc----
Confidence 9999999999999999999999999883 33333333333346667777665444433 4567899999997432
Q ss_pred CCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCcchhh--hccc
Q 017431 92 RECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVC--LLGC 169 (371)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~~~aa--~~~~ 169 (371)
+|++|..++.+.+.|++++.-+..+. .+.+
T Consensus 102 ------------------------------------------------GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGm 133 (340)
T COG2130 102 ------------------------------------------------GWQEYAISDGEGLRKLDPSPAPLSAYLGVLGM 133 (340)
T ss_pred ------------------------------------------------cceEEEeechhhceecCCCCCCcchHHhhcCC
Confidence 89999999999999998765444433 3778
Q ss_pred cchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCcEEecCCCCCchHHH
Q 017431 170 GVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQ 247 (371)
Q Consensus 170 ~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~ 247 (371)
+..|||.+|.+.+.+++|++|+|.|| |++|..+.|+||..|+ +|+++..+++|.+++++ +|.+.++||+. .++.+
T Consensus 134 pG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~--~d~~~ 210 (340)
T COG2130 134 PGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA--EDFAQ 210 (340)
T ss_pred chHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc--ccHHH
Confidence 99999999999999999999999987 9999999999999999 99999999999999987 99999999999 79999
Q ss_pred HHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCC--CCcccccc----hheeeceEEEeeecCCC-c--
Q 017431 248 VLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS--GQEISTRP----FQLVTGRVWKGTAFGGF-K-- 318 (371)
Q Consensus 248 ~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~--~~~~~~~~----~~~~~~~~~~g~~~~~~-~-- 318 (371)
.+.+..+.|+|+.||++|+ ..+...+..|+.. +|++.+|.... ....+..+ ..+.+.+++.|+-.... .
T Consensus 211 ~L~~a~P~GIDvyfeNVGg-~v~DAv~~~ln~~-aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~ 288 (340)
T COG2130 211 ALKEACPKGIDVYFENVGG-EVLDAVLPLLNLF-ARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQR 288 (340)
T ss_pred HHHHHCCCCeEEEEEcCCc-hHHHHHHHhhccc-cceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhh
Confidence 9999999999999999999 6699999999995 99999986421 11122222 22233788888877332 1
Q ss_pred ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecCC
Q 017431 319 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQD 371 (371)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~d 371 (371)
..+..+++.+++++|+++.+. +-+-.|+++++||..|.+++.. |.|+++.|
T Consensus 289 ~~e~~~~l~~wv~~GKi~~~e--ti~dGlEnaP~Af~gLl~G~N~GK~vvKv~~ 340 (340)
T COG2130 289 FPEALRELGGWVKEGKIQYRE--TIVDGLENAPEAFIGLLSGKNFGKLVVKVAD 340 (340)
T ss_pred hHHHHHHHHHHHHcCceeeEe--eehhhhhccHHHHHHHhcCCccceEEEEecC
Confidence 124577899999999999875 3344799999999999999998 99999865
|
|
| >cd05286 QOR2 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-33 Score=258.61 Aligned_cols=309 Identities=27% Similarity=0.355 Sum_probs=249.8
Q ss_pred ceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 3 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 3 ~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
||+.+..++.+ +.+.+.+.+.+.+++|+|+|.++++|+.|+....+..+. .+|.++|||++|+|+.+|++++.+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G 79 (320)
T cd05286 1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL-PLPFVLGVEGAGVVEAVGPGVTGFKVG 79 (320)
T ss_pred CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC-CCCccCCcceeEEEEEECCCCCCCCCC
Confidence 56677666654 677788877789999999999999999999988876644 457789999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|+|++.. .. |+|++|+.++.+.++++|++++
T Consensus 80 ~~V~~~~-------------------------------~~------------------g~~~~~~~~~~~~~~~~p~~~~ 110 (320)
T cd05286 80 DRVAYAG-------------------------------PP------------------GAYAEYRVVPASRLVKLPDGIS 110 (320)
T ss_pred CEEEEec-------------------------------CC------------------CceeEEEEecHHHceeCCCCCC
Confidence 9998531 01 3899999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 239 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~ 239 (371)
..+++.+++.+.++|.++....++.+|++|||+|+ |++|++++++++.+|+ +|+++++++++.+.++++|++++++..
T Consensus 111 ~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 189 (320)
T cd05286 111 DETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYR 189 (320)
T ss_pred HHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCC
Confidence 99999999999999999888889999999999996 9999999999999999 789998999999999999998888766
Q ss_pred CCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeeecCCC
Q 017431 240 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGF 317 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~ 317 (371)
+ ..+...+.+.+.+ ++|++++|+++ .....++++++++ |+++.+|..... ...++...+ .++.++.+.....+
T Consensus 190 ~--~~~~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 264 (320)
T cd05286 190 D--EDFVERVREITGGRGVDVVYDGVGK-DTFEGSLDSLRPR-GTLVSFGNASGP-VPPFDLLRLSKGSLFLTRPSLFHY 264 (320)
T ss_pred c--hhHHHHHHHHcCCCCeeEEEECCCc-HhHHHHHHhhccC-cEEEEEecCCCC-CCccCHHHHHhcCcEEEEEehhhh
Confidence 5 5677778888777 89999999998 5689999999996 999999864322 222233323 34555554433222
Q ss_pred c-c----cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 318 K-S----RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 318 ~-~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
. . ...+..+++++.++.+.+. .++.|+++++++|++.+.+++.. |+++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~~vv~~~ 320 (320)
T cd05286 265 IATREELLARAAELFDAVASGKLKVE--IGKRYPLADAAQAHRDLESRKTTGKLLLIP 320 (320)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCCcCc--ccceEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 1 1 1234567888888877643 56889999999999999887776 888753
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone |
| >cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-33 Score=259.47 Aligned_cols=312 Identities=18% Similarity=0.233 Sum_probs=242.7
Q ss_pred cceEEeecCCC--CeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~--~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
|||+++.+++. .+++++.|.|+|.+++|+|++.++++|++|+..+.|..+. ..+|.++|||++|+|++ ++++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~ 78 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK 78 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence 89999998885 3999999999999999999999999999999988876532 23577899999999999 6677899
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||+|++.... ++. +..|+|++|++++.+.++++|++
T Consensus 79 ~Gd~V~~~~~~--------------~~~-----------------------------~~~g~~~~~~~v~~~~~~~lp~~ 115 (324)
T cd08288 79 PGDRVVLTGWG--------------VGE-----------------------------RHWGGYAQRARVKADWLVPLPEG 115 (324)
T ss_pred CCCEEEECCcc--------------CCC-----------------------------CCCCcceeEEEEchHHeeeCCCC
Confidence 99999864210 000 01239999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhh--hcCCCC-CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE
Q 017431 159 APLDKVCLLGCGVPTGLGAVW--NTAKVE-PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 234 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~--~~~~~~-~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~ 234 (371)
++.++++.+++.+++++.++. +..+.. ++++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++++|+++
T Consensus 116 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~ 194 (324)
T cd08288 116 LSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASE 194 (324)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCE
Confidence 999999999999999886653 123444 6789999988 9999999999999999 7888888999999999999999
Q ss_pred EecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeee
Q 017431 235 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTA 313 (371)
Q Consensus 235 vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~ 313 (371)
++++++ +...+..++++++|.++|++++ ..+...+..++.+ |+++.+|.... ....++...+ .++.++.+..
T Consensus 195 ~~~~~~----~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~-g~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~ 267 (324)
T cd08288 195 IIDRAE----LSEPGRPLQKERWAGAVDTVGG-HTLANVLAQTRYG-GAVAACGLAGG-ADLPTTVMPFILRGVTLLGID 267 (324)
T ss_pred EEEcch----hhHhhhhhccCcccEEEECCcH-HHHHHHHHHhcCC-CEEEEEEecCC-CCCCcchhhhhccccEEEEEE
Confidence 888755 2224555555579999999998 4577888889996 99999987532 2222333333 4577777765
Q ss_pred cCCCcc---cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 314 FGGFKS---RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 314 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
+..... .+.+..+++++.++.+++ +.+.++++++++|++.+.+++.. |+++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 268 SVMAPIERRRAAWARLARDLDPALLEA---LTREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred eecccchhhHHHHHHHHHHHhcCCccc---cceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 332211 123555666777776643 36899999999999999988877 888864
|
Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal |
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-33 Score=259.09 Aligned_cols=309 Identities=24% Similarity=0.322 Sum_probs=251.1
Q ss_pred cceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
||++++.+++.+ +++.+.+.|.+.+++|+|++.++++|+.|+....|.++. ..+|.++|||++|+|+++|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK 80 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence 799999987654 788888888889999999999999999999888776533 24678999999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||+|+... .+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~-------------------------------~~------------------g~~~~~~~~~~~~~~~~p~~ 111 (323)
T cd05276 81 VGDRVCALL-------------------------------AG------------------GGYAEYVVVPAGQLLPVPEG 111 (323)
T ss_pred CCCEEEEec-------------------------------CC------------------CceeEEEEcCHHHhccCCCC
Confidence 999997531 12 29999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
+++.+++.++..+.++|+++.+...+.++++|+|+|+ |++|++++++++..|+ +|+++++++++.+.++++|++.+++
T Consensus 112 ~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (323)
T cd05276 112 LSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAIN 190 (323)
T ss_pred CCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999999888888999999999987 9999999999999999 7999989889999889999888877
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeeecC
Q 017431 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFG 315 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~ 315 (371)
... ..+...+.+.+.+ ++|++++++|+.. ....++++.++ |+++.+|..... ...+....+ .++.++.++...
T Consensus 191 ~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~~~~~-g~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 265 (323)
T cd05276 191 YRT--EDFAEEVKEATGGRGVDVILDMVGGDY-LARNLRALAPD-GRLVLIGLLGGA-KAELDLAPLLRKRLTLTGSTLR 265 (323)
T ss_pred CCc--hhHHHHHHHHhCCCCeEEEEECCchHH-HHHHHHhhccC-CEEEEEecCCCC-CCCCchHHHHHhCCeEEEeecc
Confidence 665 5666777777766 8999999999854 88899999996 999999864322 123333333 347777777654
Q ss_pred CCccc-------CcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEE
Q 017431 316 GFKSR-------SQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 367 (371)
Q Consensus 316 ~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl 367 (371)
..... ..+.++++++.++++++ ..++.|+++++++|++.+.+++.. |+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 266 SRSLEEKAALAAAFREHVWPLFASGRIRP--VIDKVFPLEEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred chhhhccHHHHHHHHHHHHHHHHCCCccC--CcceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 32110 12455777887887653 367899999999999999887665 7663
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-33 Score=259.52 Aligned_cols=315 Identities=23% Similarity=0.339 Sum_probs=251.9
Q ss_pred cceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
||++++..++.+ +.+.++|.|.+.+++|+|++.++++|++|+....|..+. ...|.++|||++|+|+++|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~ 80 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK 80 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence 789999887654 888899999999999999999999999999988876542 35788999999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||+|+..+.. . .+ .+ |++++|+.++.+.++++|++
T Consensus 81 ~Gd~v~~~~~~-----------~------------~~---~~------------------g~~~~~~~~~~~~~~~ip~~ 116 (325)
T cd08253 81 VGDRVWLTNLG-----------W------------GR---RQ------------------GTAAEYVVVPADQLVPLPDG 116 (325)
T ss_pred CCCEEEEeccc-----------c------------CC---CC------------------cceeeEEEecHHHcEeCCCC
Confidence 99999865310 0 00 12 39999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
+++.+++.+++++.+||+++....++.+|++|+|+|+ |.+|++++++++.+|+ +|+++++++++.+.++++|++++++
T Consensus 117 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 195 (325)
T cd08253 117 VSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFN 195 (325)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999999888889999999999987 9999999999999999 8999989999999999999988887
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchh-eeeceEEEeeecC
Q 017431 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFG 315 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~ 315 (371)
... .++.+.+.+.+.+ ++|++++++++. .....+++++.+ |+++.+|.... ...++... +.++.++.+....
T Consensus 196 ~~~--~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~-g~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 269 (325)
T cd08253 196 YRA--EDLADRILAATAGQGVDVIIEVLANV-NLAKDLDVLAPG-GRIVVYGSGGL--RGTIPINPLMAKEASIRGVLLY 269 (325)
T ss_pred CCC--cCHHHHHHHHcCCCceEEEEECCchH-HHHHHHHhhCCC-CEEEEEeecCC--cCCCChhHHHhcCceEEeeehh
Confidence 665 5566777777766 899999999985 478889999996 99999987432 12233232 2335555555432
Q ss_pred CCc---ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 316 GFK---SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 316 ~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
... ..+.+..+.+++.++.++. ..++.|++++++++++.+.+++.. |+++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 270 TATPEERAAAAEAIAAGLADGALRP--VIAREYPLEEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred hcCHHHHHHHHHHHHHHHHCCCccC--ccccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 211 1123445566677777653 356889999999999999887776 888753
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-33 Score=258.27 Aligned_cols=312 Identities=24% Similarity=0.338 Sum_probs=247.7
Q ss_pred cceEEeecCC--CCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 017431 2 CKAAVAWEPN--KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 79 (371)
Q Consensus 2 ~~a~~~~~~~--~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~ 79 (371)
|||+++.+++ +.++++++|.|++.+++|+|++.++++|++|+....+.......|.++|||++|+|+.+|++++.+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~ 80 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV 80 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence 8999999999 35999999999999999999999999999999888776544344778999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCC
Q 017431 80 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 159 (371)
Q Consensus 80 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~ 159 (371)
||+|++.... + .+ |+|++|+.++.+.++++|+++
T Consensus 81 Gd~V~~~~~~-------------------------~---~~------------------~~~~s~~~~~~~~~~~ip~~~ 114 (325)
T cd08271 81 GDRVAYHASL-------------------------A---RG------------------GSFAEYTVVDARAVLPLPDSL 114 (325)
T ss_pred CCEEEeccCC-------------------------C---CC------------------ccceeEEEeCHHHeEECCCCC
Confidence 9999854210 0 12 399999999999999999999
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
+..+++.+++.+.+||+++.+..++.+|++|+|+|+ |.+|++++++++..|+ .|+.+. ++++.+.++++|++.+++.
T Consensus 115 ~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~ 192 (325)
T cd08271 115 SFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDY 192 (325)
T ss_pred CHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecC
Confidence 999999999999999999888889999999999998 8999999999999999 677765 6677788888999888876
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchh---eeeceEEEeeec
Q 017431 239 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ---LVTGRVWKGTAF 314 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~---~~~~~~~~g~~~ 314 (371)
.. ..+...+.+.+++ ++|++++++++.. ....++++++. |+++.++...... ....+. ..+++.+.....
T Consensus 193 ~~--~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-G~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 266 (325)
T cd08271 193 ND--EDVCERIKEITGGRGVDAVLDTVGGET-AAALAPTLAFN-GHLVCIQGRPDAS--PDPPFTRALSVHEVALGAAHD 266 (325)
T ss_pred CC--ccHHHHHHHHcCCCCCcEEEECCCcHh-HHHHHHhhccC-CEEEEEcCCCCCc--chhHHhhcceEEEEEeccccc
Confidence 55 5566777777776 8999999999855 67789999996 9999997542211 111111 122333333221
Q ss_pred CC-----CcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 315 GG-----FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 315 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
.. ....+.+..+++++.++.+++ ...+.|+++++.+|++.+.+++.. |+++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 267 HGDPAAWQDLRYAGEELLELLAAGKLEP--LVIEVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred ccchhhHHHHHHHHHHHHHHHHCCCeee--ccceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 11 111123566888888888654 346889999999999999887766 888763
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=263.96 Aligned_cols=319 Identities=19% Similarity=0.240 Sum_probs=236.9
Q ss_pred cceEEeecCCCCeEEEEeeCCCC---CCCeEEEEEeeeecCccccccccCCCCCC-CCCcccccceeEEEEEeCCCCC-C
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPP---QAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVT-E 76 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~---~~~eVlV~v~~~~i~~~D~~~~~g~~~~~-~~p~v~G~e~~G~V~~~G~~v~-~ 76 (371)
.|++++.++++++++++++.|.| .+++|+|++.++++|++|+..+.+..... ..|.++|+|++|+|+++|++++ .
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (352)
T cd08247 1 YKALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASE 80 (352)
T ss_pred CceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccC
Confidence 47899999999988888887766 89999999999999999998775433222 2377899999999999999998 8
Q ss_pred CCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEeccc----ce
Q 017431 77 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV----SV 152 (371)
Q Consensus 77 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~----~v 152 (371)
|++||+|++.....| .+.|+|++|++++.. .+
T Consensus 81 ~~~Gd~V~~~~~~~~--------------------------------------------~~~g~~~~~~~v~~~~~~~~~ 116 (352)
T cd08247 81 WKVGDEVCGIYPHPY--------------------------------------------GGQGTLSQYLLVDPKKDKKSI 116 (352)
T ss_pred CCCCCEEEEeecCCC--------------------------------------------CCCceeeEEEEEcccccccee
Confidence 999999986432110 012499999999987 79
Q ss_pred EecCCCCCcchhhhccccchhhhhhhhhcC-CCCCCCEEEEEcC-ChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh
Q 017431 153 AKIDPQAPLDKVCLLGCGVPTGLGAVWNTA-KVEPGSIVAVFGL-GTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN 229 (371)
Q Consensus 153 ~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~-~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~-~~v~~v~~~~~~~~~~~~ 229 (371)
+++|+++++.+++.+++.+.|||+++.... .+++|++|||+|+ |.+|++++++|+++|. ++++++.+ +++.+++++
T Consensus 117 ~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~~-~~~~~~~~~ 195 (352)
T cd08247 117 TRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCS-SRSAELNKK 195 (352)
T ss_pred EECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEeC-hhHHHHHHH
Confidence 999999999999999999999999987766 7999999999988 7999999999999854 35677654 555667789
Q ss_pred cCCcEEecCCCCCc--hHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhc---cCCceEEEEccCCCCCccc------
Q 017431 230 FGVTEFVNPKDHDK--PIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCH---KGWGTSVIVGVAASGQEIS------ 297 (371)
Q Consensus 230 ~g~~~vi~~~~~~~--~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~---~~~G~iv~~g~~~~~~~~~------ 297 (371)
+|++++++..+.+. .+.+.++..+++ ++|+++||+|+......++++++ ++ |+++.++.... ....
T Consensus 196 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~-G~~v~~~~~~~-~~~~~~~~~~ 273 (352)
T cd08247 196 LGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKN-GHYVTIVGDYK-ANYKKDTFNS 273 (352)
T ss_pred hCCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCC-CEEEEEeCCCc-ccccchhhhh
Confidence 99988888765211 233334444434 89999999998667889999999 96 99998753211 1100
Q ss_pred -----ccchheeeceEEEeeecC---CCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 298 -----TRPFQLVTGRVWKGTAFG---GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 298 -----~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
.....+.++.++....+. .....+.+..+++++.++.+++ .+.+.|+++++++|++.+.+++.. |++++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 351 (352)
T cd08247 274 WDNPSANARKLFGSLGLWSYNYQFFLLDPNADWIEKCAELIADGKVKP--PIDSVYPFEDYKEAFERLKSNRAKGKVVIK 351 (352)
T ss_pred ccccchhhhhhhhhhcCCCcceEEEEecCCHHHHHHHHHHHhCCCeEe--eeccEecHHHHHHHHHHHHcCCCCCcEEEe
Confidence 011111111111111100 0011135777888998888653 367899999999999999988776 98876
Q ss_pred c
Q 017431 369 M 369 (371)
Q Consensus 369 ~ 369 (371)
+
T Consensus 352 ~ 352 (352)
T cd08247 352 V 352 (352)
T ss_pred C
Confidence 3
|
This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi |
| >cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-33 Score=258.84 Aligned_cols=311 Identities=23% Similarity=0.320 Sum_probs=250.1
Q ss_pred cceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
|||+++.+++.+ +++++.+.|++.+++|+|++.++++|++|+....|.... ...|.++|||++|+|+++|++++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR 80 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence 799999988876 888888888899999999999999999999888776532 23577899999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||+|+.... |.... .|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~--------------------------~~~~~------------------~g~~~~~~~v~~~~~~~~p~~ 116 (326)
T cd08272 81 VGDEVYGCAG--------------------------GLGGL------------------QGSLAEYAVVDARLLALKPAN 116 (326)
T ss_pred CCCEEEEccC--------------------------CcCCC------------------CCceeEEEEecHHHcccCCCC
Confidence 9999985421 00001 239999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
+++..++.+++.+.+||+++.+..++.+|++++|+|+ |.+|++++++++.+|+ +|+.++++ ++.+.++++|.+.+++
T Consensus 117 ~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~ 194 (326)
T cd08272 117 LSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIY 194 (326)
T ss_pred CCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEe
Confidence 9999999999999999998888899999999999986 9999999999999999 78888887 8888889999988887
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCC
Q 017431 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGG 316 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 316 (371)
... . +.+.+.+.+++ ++|+++|++++. .....+++++++ |+++.++... . ....... .++.++.+..+..
T Consensus 195 ~~~--~-~~~~~~~~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~-g~~v~~~~~~-~--~~~~~~~-~~~~~~~~~~~~~ 265 (326)
T cd08272 195 YRE--T-VVEYVAEHTGGRGFDVVFDTVGGE-TLDASFEAVALY-GRVVSILGGA-T--HDLAPLS-FRNATYSGVFTLL 265 (326)
T ss_pred cch--h-HHHHHHHhcCCCCCcEEEECCChH-HHHHHHHHhccC-CEEEEEecCC-c--cchhhHh-hhcceEEEEEccc
Confidence 655 4 77778888877 899999999984 588899999996 9999997642 1 1222211 2355555554321
Q ss_pred --C------cccCcHHHHHHHHHcCCCCCCCcee-eeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 317 --F------KSRSQVPWLVDKYMKKEIKVDEYVT-HNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 317 --~------~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
. .....+..+++++.++.++. .++ +.|++++++++++.+.+++.. |+++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 266 PLLTGEGRAHHGEILREAARLVERGQLRP--LLDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred ccccccchhhHHHHHHHHHHHHHCCCccc--ccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 0 11235667888888887653 334 889999999999999887666 888864
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-33 Score=258.99 Aligned_cols=305 Identities=25% Similarity=0.321 Sum_probs=239.3
Q ss_pred ceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCC-CCCcccccceeEEEEEeCCCCCCCCC
Q 017431 3 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVTEVQP 79 (371)
Q Consensus 3 ~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~-~~p~v~G~e~~G~V~~~G~~v~~~~~ 79 (371)
||+++...+.+ +++++.+.|.|.+++|+|++.++++|++|+..+.|..+.. .+|.++|||++|+|+.+|++++.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 81 (331)
T cd08273 2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEV 81 (331)
T ss_pred eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCC
Confidence 78888887765 8899999999999999999999999999999888876432 56889999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCC
Q 017431 80 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 159 (371)
Q Consensus 80 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~ 159 (371)
||+|+... .+ |+|++|+.++.+.++++|+++
T Consensus 82 Gd~V~~~~-------------------------------~~------------------g~~~~~~~~~~~~~~~~p~~~ 112 (331)
T cd08273 82 GDRVAALT-------------------------------RV------------------GGNAEYINLDAKYLVPVPEGV 112 (331)
T ss_pred CCEEEEeC-------------------------------CC------------------cceeeEEEechHHeEECCCCC
Confidence 99998542 11 289999999999999999999
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
++++++.+++++.+||+++....++.+|++|+|+|+ |.+|++++++|+.+|+ +|+.+++ +++.++++++|+.. ++.
T Consensus 113 ~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~ 189 (331)
T cd08273 113 DAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDY 189 (331)
T ss_pred CHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcC
Confidence 999999999999999999888889999999999987 9999999999999999 7888877 88888989999754 444
Q ss_pred CCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCc--ccccch-----------heee
Q 017431 239 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE--ISTRPF-----------QLVT 305 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~--~~~~~~-----------~~~~ 305 (371)
.. .++... +..++++|++++|+++.. ...++++++.+ |+++.+|....... .++++. ....
T Consensus 190 ~~--~~~~~~--~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (331)
T cd08273 190 RT--KDWLPA--MLTPGGVDVVFDGVGGES-YEESYAALAPG-GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPT 263 (331)
T ss_pred CC--cchhhh--hccCCCceEEEECCchHH-HHHHHHHhcCC-CEEEEEccCCCCCCccccccchhhhhhhhhhhcceec
Confidence 33 233322 333348999999999965 89999999996 99999986532211 111110 0111
Q ss_pred --ceEEEeeecCC----CcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEE
Q 017431 306 --GRVWKGTAFGG----FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 367 (371)
Q Consensus 306 --~~~~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl 367 (371)
..+........ ....+.+..+++++.++.++. .+.++|+++++++|++.+.+++.. |+|+
T Consensus 264 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 264 GRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRP--KIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred cceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccC--CcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 22222222110 011245777889999998763 467889999999999999887766 7765
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-32 Score=252.61 Aligned_cols=311 Identities=23% Similarity=0.306 Sum_probs=252.1
Q ss_pred cceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
|||+.+..++.+ +.+.+.+.|++.+++|+|++.++++|+.|+....+.++. ..+|.++|||++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK 80 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence 789998887765 777777777789999999999999999999888776543 24578899999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||+|+... .+ |++++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~-------------------------------~~------------------~~~~~~~~~~~~~~~~ip~~ 111 (325)
T TIGR02824 81 VGDRVCALV-------------------------------AG------------------GGYAEYVAVPAGQVLPVPEG 111 (325)
T ss_pred CCCEEEEcc-------------------------------CC------------------CcceeEEEecHHHcEeCCCC
Confidence 999998531 11 28999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
+++.+++.+++++.++|.++.+...+.++++|+|+|+ |.+|++++++++.+|+ +|+++.+++++.+.++++|.+.+++
T Consensus 112 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (325)
T TIGR02824 112 LSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAIN 190 (325)
T ss_pred CCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEe
Confidence 9999999999999999998888899999999999987 9999999999999999 8888888888888888999877776
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeeecC
Q 017431 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFG 315 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~ 315 (371)
... ..+...+....++ ++|++++++++ .....++++++++ |+++.+|....... .++...+ .++.++.+....
T Consensus 191 ~~~--~~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 265 (325)
T TIGR02824 191 YRE--EDFVEVVKAETGGKGVDVILDIVGG-SYLNRNIKALALD-GRIVQIGFQGGRKA-ELDLGPLLAKRLTITGSTLR 265 (325)
T ss_pred cCc--hhHHHHHHHHcCCCCeEEEEECCch-HHHHHHHHhhccC-cEEEEEecCCCCcC-CCChHHHHhcCCEEEEEehh
Confidence 654 5566777777776 89999999998 4688999999996 99999986432211 3333333 457888877654
Q ss_pred CCcc-------cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 316 GFKS-------RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 316 ~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
.... ...+..+++++.++.++. .+++.|++++++++++.+.+++.. |+++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 266 ARPVAEKAAIAAELREHVWPLLASGRVRP--VIDKVFPLEDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred hcchhhhHHHHHHHHHHHHHHHHCCcccC--ccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence 3211 112345677887887653 367889999999999999887766 888763
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized. |
| >cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-32 Score=251.13 Aligned_cols=315 Identities=27% Similarity=0.389 Sum_probs=249.1
Q ss_pred cceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCC-CCCcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~-~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
||++++.+.+.+ +.+.+.+.|.+.+++|+|++.++++|+.|+....+..... .+|.++|||++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA 80 (328)
T ss_pred CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence 789999876653 7788888888999999999999999999998887765432 4577899999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||+|+..+...+. .+ |++++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~--------------------------~~------------------g~~~~~~~~~~~~~~~~p~~ 116 (328)
T cd08268 81 VGDRVSVIPAADLG--------------------------QY------------------GTYAEYALVPAAAVVKLPDG 116 (328)
T ss_pred CCCEEEeccccccC--------------------------CC------------------ccceEEEEechHhcEeCCCC
Confidence 99999865321000 12 39999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
+++.+++.+++.+.++|.++.....+.++++|+|+|+ |.+|++++++++..|+ +++.+++++++.+.++++|.+.+++
T Consensus 117 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 195 (328)
T cd08268 117 LSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIV 195 (328)
T ss_pred CCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999999888889999999999988 9999999999999999 8888888888888888899888887
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccch-heeeceEEEeeecC
Q 017431 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF-QLVTGRVWKGTAFG 315 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~-~~~~~~~~~g~~~~ 315 (371)
... ..+.+.+.+.+.+ ++|++++++++ .....++++++++ |+++.+|..... ...++.. .+.++.++.+..+.
T Consensus 196 ~~~--~~~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 270 (328)
T cd08268 196 TDE--EDLVAEVLRITGGKGVDVVFDPVGG-PQFAKLADALAPG-GTLVVYGALSGE-PTPFPLKAALKKSLTFRGYSLD 270 (328)
T ss_pred cCC--ccHHHHHHHHhCCCCceEEEECCch-HhHHHHHHhhccC-CEEEEEEeCCCC-CCCCchHHHhhcCCEEEEEecc
Confidence 665 5566667777766 89999999999 5588999999996 999999864321 1122222 23446666665543
Q ss_pred CCc-ccCc----HHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 316 GFK-SRSQ----VPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 316 ~~~-~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
... ...+ +..+.+++.++.+.. ..+..|++++++++++.+.+++.. |++++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~ 327 (328)
T cd08268 271 EITLDPEARRRAIAFILDGLASGALKP--VVDRVFPFDDIVEAHRYLESGQQIGKIVVT 327 (328)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCCcC--CcccEEcHHHHHHHHHHHHcCCCCceEEEe
Confidence 211 1122 334455566666553 356889999999999999887766 88875
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=254.61 Aligned_cols=304 Identities=21% Similarity=0.247 Sum_probs=237.0
Q ss_pred ceEEeecCC------CCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCC---CCCCCcccccceeEEEEEeCCC
Q 017431 3 KAAVAWEPN------KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEG 73 (371)
Q Consensus 3 ~a~~~~~~~------~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~---~~~~p~v~G~e~~G~V~~~G~~ 73 (371)
|++++.+.+ +.+++++.|.|++.+++|+||+.++++|+.|.....+... +...+.++|+|++|+|+++|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~ 82 (329)
T cd05288 3 RQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP 82 (329)
T ss_pred cEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC
Confidence 556665443 1299999999999999999999999999977654444321 1123457899999999999964
Q ss_pred CCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecc-cce
Q 017431 74 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD-VSV 152 (371)
Q Consensus 74 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~v 152 (371)
.+++||+|+.. ++|++|+.++. +.+
T Consensus 83 --~~~~Gd~V~~~----------------------------------------------------~~~~~~~~v~~~~~~ 108 (329)
T cd05288 83 --DFKVGDLVSGF----------------------------------------------------LGWQEYAVVDGASGL 108 (329)
T ss_pred --CCCCCCEEecc----------------------------------------------------cceEEEEEecchhhc
Confidence 79999999732 18999999999 999
Q ss_pred EecCCCCC--cchhhh-ccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 017431 153 AKIDPQAP--LDKVCL-LGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 228 (371)
Q Consensus 153 ~~lP~~~~--~~~aa~-~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~ 228 (371)
+++|++++ +.++++ +++++.+||+++.....+.++++|||+|+ |.+|++++++|+.+|+ +|+++++++++.+.++
T Consensus 109 ~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~ 187 (329)
T cd05288 109 RKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLV 187 (329)
T ss_pred EECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence 99999995 445555 88899999999888888999999999986 9999999999999999 8999989999999888
Q ss_pred h-cCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCccc----c-cchh
Q 017431 229 N-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS----T-RPFQ 302 (371)
Q Consensus 229 ~-~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~----~-~~~~ 302 (371)
+ +|+++++++.+ .++.+.+.+.+++++|+++||+|+ ..+..++++++++ |+++.+|......... + ....
T Consensus 188 ~~~g~~~~~~~~~--~~~~~~v~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~ 263 (329)
T cd05288 188 EELGFDAAINYKT--PDLAEALKEAAPDGIDVYFDNVGG-EILDAALTLLNKG-GRIALCGAISQYNATEPPGPKNLGNI 263 (329)
T ss_pred hhcCCceEEecCC--hhHHHHHHHhccCCceEEEEcchH-HHHHHHHHhcCCC-ceEEEEeeccCcccccccccccHHHH
Confidence 8 99988888766 567777777765589999999998 5699999999996 9999998643221111 1 1222
Q ss_pred eeeceEEEeeecCCCcc--cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEE
Q 017431 303 LVTGRVWKGTAFGGFKS--RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 367 (371)
Q Consensus 303 ~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl 367 (371)
+.++.++.++.+..... .+.+..+++++.++.+++.+ ..+++++++++|++.+.+++.. |+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~--~~~~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 264 ITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYRE--DVVEGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred hhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccc--cccccHHHHHHHHHHHhcCCCccceeC
Confidence 33467777765433211 13467788899999887653 3568999999999999887665 7663
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=248.87 Aligned_cols=268 Identities=32% Similarity=0.467 Sum_probs=218.8
Q ss_pred eEEEEEeeeecCccccccccCCCC-CCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCcccc
Q 017431 28 EVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCG 106 (371)
Q Consensus 28 eVlV~v~~~~i~~~D~~~~~g~~~-~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~ 106 (371)
||+|+|.++++|+.|++.+.|..+ ....|.++|+|++|+|+++|++++.+++||+|+..+...|+.|.+|+. .|+
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~ 76 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCP 76 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCC
Confidence 689999999999999999988765 335678899999999999999999999999999999999999999997 565
Q ss_pred cccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCcchhhhccccchhhhhhhhhcCCCCC
Q 017431 107 KVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEP 186 (371)
Q Consensus 107 ~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~ 186 (371)
.... .+ ....|+|++|+.++.+.++++|+++++++++.+++++.+||+++.....+.+
T Consensus 77 ~~~~---~~-------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~ 134 (271)
T cd05188 77 GGGI---LG-------------------EGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKP 134 (271)
T ss_pred CCCE---ec-------------------cccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCC
Confidence 4432 11 1123499999999999999999999999999999999999999888777799
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCC-CccEEEEccC
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG 265 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g 265 (371)
+++|||+|+|++|++++++++.+|. +|+++++++++.+.++++|.+++++..+ ..+.+.+. .+.+ ++|+++++++
T Consensus 135 ~~~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~-~~~~~~~d~vi~~~~ 210 (271)
T cd05188 135 GDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKE--EDLEEELR-LTGGGGADVVIDAVG 210 (271)
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCc--CCHHHHHH-HhcCCCCCEEEECCC
Confidence 9999999996699999999999998 8999999999999999999888887665 44555555 4444 8999999999
Q ss_pred CHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCCcccCcHHHHHHH
Q 017431 266 NVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDK 329 (371)
Q Consensus 266 ~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 329 (371)
+......++++++++ |+++.++..............+.++.++.++....+ .+++.++++
T Consensus 211 ~~~~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 270 (271)
T cd05188 211 GPETLAQALRLLRPG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTR---EDFEEALDL 270 (271)
T ss_pred CHHHHHHHHHhcccC-CEEEEEccCCCCCCcccHHHHHhcceEEEEeecCCH---HHHHHHHhh
Confidence 866689999999996 999999875433222222333445788888765433 356666554
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >cd08251 polyketide_synthase polyketide synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-31 Score=246.54 Aligned_cols=292 Identities=24% Similarity=0.362 Sum_probs=231.8
Q ss_pred CCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccC
Q 017431 21 VAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKS 99 (371)
Q Consensus 21 ~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~ 99 (371)
.|++.+++|+|++.++++|+.|+..+.+.++. ..+|.++|+|++|+|+++|++++++++||+|++....
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~---------- 71 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGE---------- 71 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCC----------
Confidence 57789999999999999999999988876543 2568899999999999999999999999999864210
Q ss_pred CCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCcchhhhccccchhhhhhhh
Q 017431 100 GKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVW 179 (371)
Q Consensus 100 ~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~ 179 (371)
.+ |+|++|+.++.+.++++|+++++++++.++..+.+||.++
T Consensus 72 -------------------~~------------------g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l- 113 (303)
T cd08251 72 -------------------SM------------------GGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF- 113 (303)
T ss_pred -------------------CC------------------cceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-
Confidence 12 3999999999999999999999999999999999999987
Q ss_pred hcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCC-Cc
Q 017431 180 NTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GV 257 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~g-g~ 257 (371)
+...+++|++|+|+|+ |.+|++++|+++++|+ +++++++++++.+.++++|++.+++... .++...+.+.+++ ++
T Consensus 114 ~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~i~~~~~~~~~ 190 (303)
T cd08251 114 ARAGLAKGEHILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVE--EDFEEEIMRLTGGRGV 190 (303)
T ss_pred HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCC--ccHHHHHHHHcCCCCc
Confidence 5789999999999966 9999999999999999 8999989999999999999998888765 5677778888877 99
Q ss_pred cEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCC------cccCcHHHHHHHHH
Q 017431 258 DYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF------KSRSQVPWLVDKYM 331 (371)
Q Consensus 258 dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~------~~~~~~~~~~~~~~ 331 (371)
|+++|++++ ......+++++++ |+++.+|.........+....+.++..+....+... ...+.+.++++++.
T Consensus 191 d~v~~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (303)
T cd08251 191 DVVINTLSG-EAIQKGLNCLAPG-GRYVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVE 268 (303)
T ss_pred eEEEECCcH-HHHHHHHHHhccC-cEEEEEeccCCCccCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHH
Confidence 999999976 6688999999996 999998764322111222222222222222221110 11134666788888
Q ss_pred cCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEE
Q 017431 332 KKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 367 (371)
Q Consensus 332 ~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl 367 (371)
++.++. ..++.|++++++++++.+.+++.. |+++
T Consensus 269 ~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 269 EGELRP--TVSRIFPFDDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred CCCccC--CCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 888663 356889999999999999887766 7663
|
Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a |
| >cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-32 Score=248.42 Aligned_cols=301 Identities=24% Similarity=0.298 Sum_probs=239.8
Q ss_pred cceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCC---CCCCCcccccceeEEEEEeCCCCCC
Q 017431 2 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTE 76 (371)
Q Consensus 2 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~---~~~~p~v~G~e~~G~V~~~G~~v~~ 76 (371)
|||+++..++.. +.+.+.+.|++.+++|+|++.++++|+.|+..+.|... ...+|.++|||++|+|+.+|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 789999887754 56778888889999999999999999999998877652 2345888999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecC
Q 017431 77 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 156 (371)
Q Consensus 77 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP 156 (371)
+++||+|+..+.. + .+ |+|++|+.++...++++|
T Consensus 81 ~~~G~~V~~~~~~-------------------------~---~~------------------g~~~~~~~~~~~~~~~~p 114 (309)
T cd05289 81 FKVGDEVFGMTPF-------------------------T---RG------------------GAYAEYVVVPADELALKP 114 (309)
T ss_pred CCCCCEEEEccCC-------------------------C---CC------------------CcceeEEEecHHHhccCC
Confidence 9999999865310 0 12 399999999999999999
Q ss_pred CCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE
Q 017431 157 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 235 (371)
Q Consensus 157 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v 235 (371)
+++++..++.+++.+.++|+++.....+.++++|||+|+ |.+|++++++++..|+ +|+++++++ +.+.++++|.+.+
T Consensus 115 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~ 192 (309)
T cd05289 115 ANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEV 192 (309)
T ss_pred CCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEE
Confidence 999999999999999999998877777999999999997 9999999999999999 788877766 7888888998888
Q ss_pred ecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeec
Q 017431 236 VNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAF 314 (371)
Q Consensus 236 i~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~ 314 (371)
++... .++.. .+.+ ++|++++++++. ....++++++++ |+++.+|....... ..+.++.++....+
T Consensus 193 ~~~~~--~~~~~----~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~-----~~~~~~~~~~~~~~ 259 (309)
T cd05289 193 IDYTK--GDFER----AAAPGGVDAVLDTVGGE-TLARSLALVKPG-GRLVSIAGPPPAEQ-----AAKRRGVRAGFVFV 259 (309)
T ss_pred EeCCC--Cchhh----ccCCCCceEEEECCchH-HHHHHHHHHhcC-cEEEEEcCCCcchh-----hhhhccceEEEEEe
Confidence 77654 33322 3344 899999999985 689999999996 99999987532111 11222444444433
Q ss_pred CCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEE
Q 017431 315 GGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 367 (371)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl 367 (371)
... ...+..+++++.++.++ +.+++.|+++++++|++.+.+++.. |+++
T Consensus 260 ~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 260 EPD--GEQLAELAELVEAGKLR--PVVDRVFPLEDAAEAHERLESGHARGKVVL 309 (309)
T ss_pred ccc--HHHHHHHHHHHHCCCEE--EeeccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence 221 35688899999888765 3467899999999999999877665 6653
|
Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et |
| >cd08241 QOR1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-31 Score=244.11 Aligned_cols=309 Identities=30% Similarity=0.449 Sum_probs=248.4
Q ss_pred cceEEeecCCCC--eEEEEeeCCCCC-CCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCC
Q 017431 2 CKAAVAWEPNKP--LVIEDVQVAPPQ-AGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEV 77 (371)
Q Consensus 2 ~~a~~~~~~~~~--~~~~~~~~~~~~-~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~ 77 (371)
|+|+++..++.+ +++.+.+ |.+. +++++|++.++++|++|+..+.|.... ...|.++|||++|+|+.+|++++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF 79 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence 789999865544 7777777 7665 599999999999999999988776532 2346689999999999999999999
Q ss_pred CCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCC
Q 017431 78 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 157 (371)
Q Consensus 78 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~ 157 (371)
++||+|+..+ .. |++++|+.++.+.++++|+
T Consensus 80 ~~G~~V~~~~-------------------------------~~------------------~~~~~~~~~~~~~~~~ip~ 110 (323)
T cd08241 80 KVGDRVVALT-------------------------------GQ------------------GGFAEEVVVPAAAVFPLPD 110 (323)
T ss_pred CCCCEEEEec-------------------------------CC------------------ceeEEEEEcCHHHceeCCC
Confidence 9999998542 01 3899999999999999999
Q ss_pred CCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEe
Q 017431 158 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 236 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi 236 (371)
++++.+++.+...+.+||.++.....+.++++|+|+|+ |.+|++++++|+..|+ .|+.+++++++.+.++++|++.++
T Consensus 111 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (323)
T cd08241 111 GLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVI 189 (323)
T ss_pred CCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceee
Confidence 99999998899999999998877888999999999998 9999999999999999 789998889999999999988877
Q ss_pred cCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccc-hheeeceEEEeeec
Q 017431 237 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP-FQLVTGRVWKGTAF 314 (371)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~ 314 (371)
+... .++.+.+.+.+++ ++|++++++|+ .....++++++++ |+++.+|....... .+.. ..+.++.++.+..+
T Consensus 190 ~~~~--~~~~~~i~~~~~~~~~d~v~~~~g~-~~~~~~~~~~~~~-g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (323)
T cd08241 190 DYRD--PDLRERVKALTGGRGVDVVYDPVGG-DVFEASLRSLAWG-GRLLVIGFASGEIP-QIPANLLLLKNISVVGVYW 264 (323)
T ss_pred ecCC--ccHHHHHHHHcCCCCcEEEEECccH-HHHHHHHHhhccC-CEEEEEccCCCCcC-cCCHHHHhhcCcEEEEEec
Confidence 7655 5677778888777 89999999998 5688999999996 99999986432111 1212 12234667777655
Q ss_pred CCCcc------cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEe
Q 017431 315 GGFKS------RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 368 (371)
Q Consensus 315 ~~~~~------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~ 368 (371)
..+.. ...+..+++++.++.+. +..++.|+++++++|++.+.+++.. |++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 265 GAYARREPELLRANLAELFDLLAEGKIR--PHVSAVFPLEQAAEALRALADRKATGKVVLT 323 (323)
T ss_pred ccccchhHHHHHHHHHHHHHHHHCCCcc--cccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence 43321 13466788888888765 3467889999999999998877665 77763
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic |
| >cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-30 Score=243.06 Aligned_cols=310 Identities=23% Similarity=0.317 Sum_probs=242.3
Q ss_pred ceEEeecCCC--CeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 017431 3 KAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQP 79 (371)
Q Consensus 3 ~a~~~~~~~~--~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~~~ 79 (371)
||+++...+. .+.+.+.+.|++.+++|+|++.++++|+.|+..+.|..+. ...|.++|||++|+|+.+|++++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~ 80 (337)
T cd08275 1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV 80 (337)
T ss_pred CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence 5667766654 3788888888899999999999999999999988876542 245778999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCC
Q 017431 80 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 159 (371)
Q Consensus 80 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~ 159 (371)
||+|+... .+ |+|++|+.++.+.++++|+++
T Consensus 81 G~~V~~~~-------------------------------~~------------------~~~~~~~~~~~~~~~~ip~~~ 111 (337)
T cd08275 81 GDRVMGLT-------------------------------RF------------------GGYAEVVNVPADQVFPLPDGM 111 (337)
T ss_pred CCEEEEec-------------------------------CC------------------CeeeeEEEecHHHeEECCCCC
Confidence 99998542 11 289999999999999999999
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhhHHHHHhcCCcEEec
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~-~~~~~~~~~~~~g~~~vi~ 237 (371)
++.+++.+++++.++|+++.+...+++|++|+|+|+ |.+|++++++|+.+ . .+.++. ..+++.+.++++|++.+++
T Consensus 112 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~-~-~~~~~~~~~~~~~~~~~~~g~~~~~~ 189 (337)
T cd08275 112 SFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTV-P-NVTVVGTASASKHEALKENGVTHVID 189 (337)
T ss_pred CHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHc-c-CcEEEEeCCHHHHHHHHHcCCcEEee
Confidence 999999999999999999888889999999999998 99999999999999 2 233332 3355778888899988887
Q ss_pred CCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCC--Cccc-------------ccchh
Q 017431 238 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG--QEIS-------------TRPFQ 302 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~--~~~~-------------~~~~~ 302 (371)
... ..+...+...+++++|+++|++|+. ....++++++++ |+++.+|..... ...+ +.+..
T Consensus 190 ~~~--~~~~~~~~~~~~~~~d~v~~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (337)
T cd08275 190 YRT--QDYVEEVKKISPEGVDIVLDALGGE-DTRKSYDLLKPM-GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMK 265 (337)
T ss_pred CCC--CcHHHHHHHHhCCCceEEEECCcHH-HHHHHHHhhccC-cEEEEEeecCCcCcccccccccccccccccccCHHH
Confidence 765 5677777777655899999999984 588999999996 999999864321 1111 11111
Q ss_pred -eeeceEEEeeecCCCcc-----cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 303 -LVTGRVWKGTAFGGFKS-----RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 303 -~~~~~~~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
+.++.++.++.+..... ...+..+++++.++.+.. ..++.|++++++++++.+.+++.. |+++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 266 LISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKP--KIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred HhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCC--ceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 23367777765432111 113566888888888654 356889999999999999887766 988864
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-31 Score=243.52 Aligned_cols=295 Identities=25% Similarity=0.314 Sum_probs=226.7
Q ss_pred EEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC---CCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCC
Q 017431 15 VIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE---GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAEC 91 (371)
Q Consensus 15 ~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~---~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~ 91 (371)
++++.|.|++.+++|+|++.++++|++|+..+.|..+. ...|.++|||++|+|+++|++++.+++||+|+.....+
T Consensus 15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~- 93 (319)
T cd08267 15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPK- 93 (319)
T ss_pred ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccCC-
Confidence 78889999999999999999999999999988776531 23567899999999999999999999999998643210
Q ss_pred CCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCcchhhhccccc
Q 017431 92 RECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGV 171 (371)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~~~aa~~~~~~ 171 (371)
.+ |+|++|+.++.+.++++|+++++++++.+++.+
T Consensus 94 ---------------------------~~------------------g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~ 128 (319)
T cd08267 94 ---------------------------GG------------------GALAEYVVAPESGLAKKPEGVSFEEAAALPVAG 128 (319)
T ss_pred ---------------------------CC------------------ceeeEEEEechhheEECCCCCCHHHHHhhhhHH
Confidence 12 389999999999999999999999999999999
Q ss_pred hhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHH
Q 017431 172 PTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLV 250 (371)
Q Consensus 172 ~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~ 250 (371)
.+||+++.....+++|++|+|+|+ |.+|++++++|+.+|+ +|++++++ ++.+.++++|.+++++... ..+. .
T Consensus 129 ~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~--~~~~---~ 201 (319)
T cd08267 129 LTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTT--EDFV---A 201 (319)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCC--CCcc---h
Confidence 999999877778999999999998 9999999999999999 78888765 7788889999988887655 2332 3
Q ss_pred hhcCC-CccEEEEccCCH-HHHHHHHHHhccCCceEEEEccCCCCCcccc---cchheeeceEEEeeecCCCcccCcHHH
Q 017431 251 DLTDG-GVDYSFECIGNV-SVMRAALECCHKGWGTSVIVGVAASGQEIST---RPFQLVTGRVWKGTAFGGFKSRSQVPW 325 (371)
Q Consensus 251 ~~~~g-g~dvvid~~g~~-~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~ 325 (371)
..+.+ ++|++++|+++. ......+..++++ |+++.+|.......... ..........+....... ..+.+..
T Consensus 202 ~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 278 (319)
T cd08267 202 LTAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKP--NAEDLEQ 278 (319)
T ss_pred hccCCCCCcEEEECCCchHHHHHHhhhccCCC-CEEEEeccccccccccccccchhhccccceEEEEEecC--CHHHHHH
Confidence 44555 899999999852 2234444458995 99999987532221111 011111112222222211 1457888
Q ss_pred HHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEE
Q 017431 326 LVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 367 (371)
Q Consensus 326 ~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl 367 (371)
+++++.++.++. .++++|+++++++|++.+.+++.. |+++
T Consensus 279 ~~~~l~~~~~~~--~~~~~~~~~~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 279 LAELVEEGKLKP--VIDSVYPLEDAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred HHHHHHCCCeee--eeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence 999998888653 467899999999999999887665 6653
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd05195 enoyl_red enoyl reductase of polyketide synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-30 Score=233.67 Aligned_cols=282 Identities=22% Similarity=0.279 Sum_probs=226.1
Q ss_pred CeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCcccc
Q 017431 27 GEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCG 106 (371)
Q Consensus 27 ~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~ 106 (371)
+||+||+.++++|++|++...|..+ .+|.++|||++|+|+++|++++.+++||+|++..
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~~--~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~------------------- 59 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLLP--GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA------------------- 59 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCCC--CCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-------------------
Confidence 5799999999999999998887652 4578899999999999999999999999997531
Q ss_pred cccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCcchhhhccccchhhhhhhhhcCCCCC
Q 017431 107 KVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEP 186 (371)
Q Consensus 107 ~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~ 186 (371)
+ |+|++|+.++.+.++++|+++++.+++.+++++.++|.++.+...+++
T Consensus 60 -------------~------------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 108 (293)
T cd05195 60 -------------P------------------GAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQK 108 (293)
T ss_pred -------------c------------------CcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCC
Confidence 1 399999999999999999999999999999999999999888889999
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcC--CcEEecCCCCCchHHHHHHhhcCC-CccEEEE
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG--VTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFE 262 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g--~~~vi~~~~~~~~~~~~~~~~~~g-g~dvvid 262 (371)
|++|+|+|+ |.+|++++++++.+|+ +++++.+++++.+.+++++ ++.+++... ..+.+.+.+.+.+ ++|++++
T Consensus 109 g~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~vi~ 185 (293)
T cd05195 109 GESVLIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSRD--LSFADGILRATGGRGVDVVLN 185 (293)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecCc--hhHHHHHHHHhCCCCceEEEe
Confidence 999999975 9999999999999999 8899988888899888888 677777655 5677778888777 8999999
Q ss_pred ccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCCc------ccCcHHHHHHHHHcCCCC
Q 017431 263 CIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFK------SRSQVPWLVDKYMKKEIK 336 (371)
Q Consensus 263 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~------~~~~~~~~~~~~~~~~~~ 336 (371)
++++. .+..++++++++ |+++.+|.........+....+.++.++....+.... ....+..+++++.+++++
T Consensus 186 ~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (293)
T cd05195 186 SLSGE-LLRASWRCLAPF-GRFVEIGKRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLK 263 (293)
T ss_pred CCCch-HHHHHHHhcccC-ceEEEeeccccccCCccchhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcc
Confidence 99996 699999999996 9999998643221112222222223444443322110 112466788888888865
Q ss_pred CCCceeeeeecccHHHHHHHHhCCCee-EEEE
Q 017431 337 VDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 367 (371)
Q Consensus 337 ~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl 367 (371)
+..++.++++++++|++.+.+++.. |+++
T Consensus 264 --~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 264 --PLPPTVVPSASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred --cCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence 4456789999999999999887765 7653
|
Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase |
| >smart00829 PKS_ER Enoylreductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-29 Score=229.68 Aligned_cols=276 Identities=22% Similarity=0.356 Sum_probs=221.1
Q ss_pred EEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCcccccccC
Q 017431 31 IKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRG 110 (371)
Q Consensus 31 V~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (371)
||+.++++|++|++...|.++ .|.++|||++|+|+++|+.++.+++||+|+...
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~----------------------- 55 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA----------------------- 55 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-----------------------
Confidence 889999999999999887653 356899999999999999999999999997431
Q ss_pred CCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEE
Q 017431 111 ATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIV 190 (371)
Q Consensus 111 ~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~V 190 (371)
+ |+|++|+.++.+.++++|+++++.+++.+++.+.++|.++.+...+.+|++|
T Consensus 56 ---------~------------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~v 108 (288)
T smart00829 56 ---------P------------------GSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESV 108 (288)
T ss_pred ---------C------------------CceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEE
Confidence 1 3999999999999999999999999999999999999988788889999999
Q ss_pred EEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC--cEEecCCCCCchHHHHHHhhcCC-CccEEEEccCC
Q 017431 191 AVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV--TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGN 266 (371)
Q Consensus 191 lI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~--~~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~ 266 (371)
+|+|+ |.+|++++++++.+|+ +|+++++++++.+.++++|+ +.++++.+ .++.+.+.+.+++ ++|+++|++++
T Consensus 109 lv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~vi~~~~~ 185 (288)
T smart00829 109 LIHAAAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRD--LSFADEILRATGGRGVDVVLNSLAG 185 (288)
T ss_pred EEecCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCC--ccHHHHHHHHhCCCCcEEEEeCCCH
Confidence 99986 9999999999999999 89999989999999999998 67777655 5566777777776 89999999996
Q ss_pred HHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCCc-----ccCcHHHHHHHHHcCCCCCCCce
Q 017431 267 VSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFK-----SRSQVPWLVDKYMKKEIKVDEYV 341 (371)
Q Consensus 267 ~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i 341 (371)
.....++++++++ |+++.+|.........++...+.++.++.+..+.... ....+..+++++.++.+++. .
T Consensus 186 -~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 261 (288)
T smart00829 186 -EFLDASLRCLAPG-GRFVEIGKRDIRDNSQLGMAPFRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL--P 261 (288)
T ss_pred -HHHHHHHHhccCC-cEEEEEcCcCCccccccchhhhcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc--C
Confidence 6688999999996 9999998643211122222223334444444332110 11245667888888876643 4
Q ss_pred eeeeecccHHHHHHHHhCCCee-EEE
Q 017431 342 THNMTLGEINEAFRYMHGGDCL-RCV 366 (371)
Q Consensus 342 ~~~~~~~~~~~A~~~~~~~~~~-kvv 366 (371)
.+.|++++++++++.+.+++.. |++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~iv 287 (288)
T smart00829 262 VTVFPISDVEDAFRYMQQGKHIGKVV 287 (288)
T ss_pred ceEEcHHHHHHHHHHHhcCCCcceEe
Confidence 5789999999999999887655 665
|
Enoylreductase in Polyketide synthases. |
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.1e-29 Score=244.24 Aligned_cols=293 Identities=19% Similarity=0.243 Sum_probs=245.1
Q ss_pred eEEEEeeCC---CCCCCeEEEEEeeeecCccccccccCCCCCCCCC-------cccccceeEEEEEeCCCCCCCCCCCEE
Q 017431 14 LVIEDVQVA---PPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFP-------CILGHEAAGIVESVGEGVTEVQPGDHV 83 (371)
Q Consensus 14 ~~~~~~~~~---~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p-------~v~G~e~~G~V~~~G~~v~~~~~Gd~V 83 (371)
++|.+-|.. +..++.=++-|-|+.+|.+|+....|+.+....| +++|-|++|+ .+-|.||
T Consensus 1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRV 1498 (2376)
T ss_pred eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEE
Confidence 666666654 2356667999999999999999999988766544 5789999986 5679999
Q ss_pred eecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCcch
Q 017431 84 IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDK 163 (371)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~~~ 163 (371)
+.... -. ++++.+.++.+++|.+|.+..+++
T Consensus 1499 M~mvp-------------------------------Ak------------------sLATt~l~~rd~lWevP~~WTlee 1529 (2376)
T KOG1202|consen 1499 MGMVP-------------------------------AK------------------SLATTVLASRDFLWEVPSKWTLEE 1529 (2376)
T ss_pred EEeee-------------------------------hh------------------hhhhhhhcchhhhhhCCcccchhh
Confidence 75431 11 889999999999999999999999
Q ss_pred hhhccccchhhhhhhhhcCCCCCCCEEEEE-cCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc----CCcEEecC
Q 017431 164 VCLLGCGVPTGLGAVWNTAKVEPGSIVAVF-GLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTEFVNP 238 (371)
Q Consensus 164 aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~-Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~----g~~~vi~~ 238 (371)
|+..|+.|.|+|++|..++..++|++|||+ |+|++|+|||.+|.+.|+ .|+.+..+++|++++.++ ...++-|.
T Consensus 1530 AstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NS 1608 (2376)
T KOG1202|consen 1530 ASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANS 1608 (2376)
T ss_pred cccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhccccc
Confidence 999999999999999999999999999999 669999999999999999 899999999999988653 33556666
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCC
Q 017431 239 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF 317 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 317 (371)
++ .+|.+.+...|+| |+|+|+|+... +-++.+++||+.. |+|..+|...-...-++.+.-|.+|.++.|..+.+.
T Consensus 1609 Rd--tsFEq~vl~~T~GrGVdlVLNSLae-EkLQASiRCLa~~-GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsv 1684 (2376)
T KOG1202|consen 1609 RD--TSFEQHVLWHTKGRGVDLVLNSLAE-EKLQASIRCLALH-GRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSV 1684 (2376)
T ss_pred cc--ccHHHHHHHHhcCCCeeeehhhhhH-HHHHHHHHHHHhc-CeeeeecceecccCCcchhhhhhcccceeeeehhhh
Confidence 66 8899999999999 99999999988 4499999999997 999999987655555667777778888888876554
Q ss_pred cc--cCcHHHHHHHHHcCCCC--CCCceeeeeecccHHHHHHHHhCCCee-EEEEecC
Q 017431 318 KS--RSQVPWLVDKYMKKEIK--VDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 370 (371)
Q Consensus 318 ~~--~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~ 370 (371)
.. .+++.++..++++|.-. +.|+.+++|+-.++++||++|.+++++ |||+++.
T Consensus 1685 mege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikvr 1742 (2376)
T KOG1202|consen 1685 MEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKVR 1742 (2376)
T ss_pred hcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEEc
Confidence 32 24567788888776433 567789999999999999999999998 9999874
|
|
| >cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=218.17 Aligned_cols=250 Identities=28% Similarity=0.389 Sum_probs=195.1
Q ss_pred CCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCcccccc
Q 017431 48 GKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSI 127 (371)
Q Consensus 48 g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~ 127 (371)
|.++. ++|.++|||++|+|+++|++++.+++||+|+...
T Consensus 14 ~~~~~-~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~---------------------------------------- 52 (277)
T cd08255 14 GTEKL-PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCFG---------------------------------------- 52 (277)
T ss_pred cCccC-cCCcccCcceeEEEEEeCCCCCCCCCCCEEEecC----------------------------------------
Confidence 44444 4889999999999999999999999999997431
Q ss_pred CCcceeeccCCcceeeeEEecccceEecCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHH
Q 017431 128 NGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAK 207 (371)
Q Consensus 128 ~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~ 207 (371)
.|++|+.++.+.++++|+++++.+++.+ +++++||+++ ...+++++++|||+|+|.+|++++++|+
T Consensus 53 ------------~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~ 118 (277)
T cd08255 53 ------------PHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAK 118 (277)
T ss_pred ------------CcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHH
Confidence 6899999999999999999999998888 7899999987 4788999999999988999999999999
Q ss_pred HcCCCeEEEEcCChhhHHHHHhcC-CcEEecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEE
Q 017431 208 AAGASRVIGIDIDPKKFDRAKNFG-VTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSV 285 (371)
Q Consensus 208 ~~g~~~v~~v~~~~~~~~~~~~~g-~~~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv 285 (371)
++|+++|+++++++++.++++++| .+.++.... ..+.+ ++|++||+++........+++++++ |+++
T Consensus 119 ~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~ 187 (277)
T cd08255 119 AAGAREVVGVDPDAARRELAEALGPADPVAADTA----------DEIGGRGADVVIEASGSPSALETALRLLRDR-GRVV 187 (277)
T ss_pred HcCCCcEEEECCCHHHHHHHHHcCCCccccccch----------hhhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEE
Confidence 999944999999999999999999 444443321 12234 8999999998777789999999996 9999
Q ss_pred EEccCCCCCcccccchhee-eceEEEeeecCCC---------cccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHH
Q 017431 286 IVGVAASGQEISTRPFQLV-TGRVWKGTAFGGF---------KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFR 355 (371)
Q Consensus 286 ~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~ 355 (371)
.+|..... .... ...+. +..++.+...... ...+.+.++++++.++.++. .+.++|+++++++|++
T Consensus 188 ~~g~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~ 263 (277)
T cd08255 188 LVGWYGLK-PLLL-GEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEA--LITHRVPFEDAPEAYR 263 (277)
T ss_pred EEeccCCC-cccc-HHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCccc--cccCccCHHHHHHHHH
Confidence 99875332 1111 11122 2334444443221 11256888999999988653 3578899999999999
Q ss_pred HHhCC--CeeEEEE
Q 017431 356 YMHGG--DCLRCVL 367 (371)
Q Consensus 356 ~~~~~--~~~kvvl 367 (371)
.+.++ ...|++|
T Consensus 264 ~~~~~~~~~~k~~~ 277 (277)
T cd08255 264 LLFEDPPECLKVVL 277 (277)
T ss_pred HHHcCCccceeeeC
Confidence 99887 3348764
|
This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD |
| >KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-24 Score=188.62 Aligned_cols=295 Identities=22% Similarity=0.277 Sum_probs=220.0
Q ss_pred EEEEeeCC-CCCCCeEEEEEeeeecCccccccccCCCCCC-CCCc-----ccccceeEEEEEeCCCCCCCCCCCEEeecC
Q 017431 15 VIEDVQVA-PPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPC-----ILGHEAAGIVESVGEGVTEVQPGDHVIPCY 87 (371)
Q Consensus 15 ~~~~~~~~-~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~-~~p~-----v~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~ 87 (371)
+..+++++ ++.+++|+||..+-+..+.-...+....+.. --|. +.| ..+|+|++.+. +++++||.|..
T Consensus 25 ~~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g-~GV~kVi~S~~--~~~~~GD~v~g-- 99 (343)
T KOG1196|consen 25 TTTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDG-FGVAKVIDSGH--PNYKKGDLVWG-- 99 (343)
T ss_pred eeeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecC-CceEEEEecCC--CCCCcCceEEE--
Confidence 33344544 5689999999999998764322221111110 1122 334 67899999644 68999999963
Q ss_pred CCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccc--eEecCC--CCCcch
Q 017431 88 QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS--VAKIDP--QAPLDK 163 (371)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~--v~~lP~--~~~~~~ 163 (371)
+. +|.+|..+++.. .+++|. ++++--
T Consensus 100 ----------------------------~~----------------------gWeeysii~~~~~~~~ki~~~~~~pLs~ 129 (343)
T KOG1196|consen 100 ----------------------------IV----------------------GWEEYSVITPNDLEHFKIQHPTDVPLSY 129 (343)
T ss_pred ----------------------------ec----------------------cceEEEEecCcchhcccCCCCCccCHhh
Confidence 22 899999887753 344433 444444
Q ss_pred hh-hccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCcEEecCCC
Q 017431 164 VC-LLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKD 240 (371)
Q Consensus 164 aa-~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~vi~~~~ 240 (371)
.. ++.++.+|||.++++...+++|++|+|-|| |++|+.+.|+|+.+|+ +|+++..+++|.++++ ++|.+..+||.+
T Consensus 130 ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~ 208 (343)
T KOG1196|consen 130 YLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKE 208 (343)
T ss_pred hhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccC
Confidence 33 467889999999999999999999999987 9999999999999999 9999999999999886 579999999998
Q ss_pred CCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCC-----CCCcccccchheeeceEEEeeecC
Q 017431 241 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA-----SGQEISTRPFQLVTGRVWKGTAFG 315 (371)
Q Consensus 241 ~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~-----~~~~~~~~~~~~~~~~~~~g~~~~ 315 (371)
+.+...++++..+.|+|+.||.+|+ ..+...+..|+.. |+++.+|... .+..+.-....+.+.+.+.|+...
T Consensus 209 -e~~~~~aL~r~~P~GIDiYfeNVGG-~~lDavl~nM~~~-gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~ 285 (343)
T KOG1196|consen 209 -ESDLSAALKRCFPEGIDIYFENVGG-KMLDAVLLNMNLH-GRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVS 285 (343)
T ss_pred -ccCHHHHHHHhCCCcceEEEeccCc-HHHHHHHHhhhhc-cceEeeeeehhccccCCccccchhhheeeeEEeeeEEee
Confidence 2478888988877799999999999 6699999999995 9999999643 111222223334568888887655
Q ss_pred CCcc--cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecC
Q 017431 316 GFKS--RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 370 (371)
Q Consensus 316 ~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~ 370 (371)
.+.+ .+-++.+..++.+++++...-+.. .|++.++||.-|.+++.. |-++++.
T Consensus 286 d~~d~~~k~ld~l~~~ikegKI~y~edi~~--Glen~P~A~vglf~GkNvGKqiv~va 341 (343)
T KOG1196|consen 286 DYLDKYPKFLDFLLPYIKEGKITYVEDIAD--GLENGPSALVGLFHGKNVGKQLVKVA 341 (343)
T ss_pred chhhhhHHHHHHHHHHHhcCceEEehhHHH--HHhccHHHHHHHhccCcccceEEEee
Confidence 4422 234567888889999886544333 699999999999998887 9888775
|
|
| >PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.9e-22 Score=156.92 Aligned_cols=108 Identities=37% Similarity=0.689 Sum_probs=93.3
Q ss_pred CCeEEEEEeeeecCccccccccCC-CCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCcc
Q 017431 26 AGEVRIKILFTALCHTDAYTWSGK-DPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNL 104 (371)
Q Consensus 26 ~~eVlV~v~~~~i~~~D~~~~~g~-~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~ 104 (371)
|+||+|||++++||++|++.+.|. .....+|.++|||++|+|+++|+++++|++||+|++.+...|+.|.+|+.+..+.
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~ 80 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL 80 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence 689999999999999999999994 4555899999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEec
Q 017431 105 CGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI 155 (371)
Q Consensus 105 ~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~l 155 (371)
|..... +|+. .+| +|++|+.+|+++++|+
T Consensus 81 c~~~~~---~g~~-~~G------------------~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 81 CPNPEV---LGLG-LDG------------------GFAEYVVVPARNLVPV 109 (109)
T ss_dssp TTTBEE---TTTS-STC------------------SSBSEEEEEGGGEEEE
T ss_pred CCCCCE---eEcC-CCC------------------cccCeEEEehHHEEEC
Confidence 976653 3333 444 9999999999999985
|
1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A .... |
| >PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=99.72 E-value=8.7e-17 Score=129.20 Aligned_cols=128 Identities=29% Similarity=0.445 Sum_probs=112.6
Q ss_pred hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHH
Q 017431 197 TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALE 275 (371)
Q Consensus 197 ~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~ 275 (371)
++|++++|+|+++|+ +|++++++++|+++++++|+++++++.+ .++.+.+++.+++ ++|++|||+|.+..++.+++
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~--~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~ 77 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD--DDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIK 77 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT--SSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc--cccccccccccccccceEEEEecCcHHHHHHHHH
Confidence 589999999999996 9999999999999999999999999988 6799999999998 99999999998899999999
Q ss_pred HhccCCceEEEEccCCCCCcccccchheee-ceEEEeeecCCCcccCcHHHHHHHHHc
Q 017431 276 CCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMK 332 (371)
Q Consensus 276 ~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~ 332 (371)
+++++ |+++.+|... ....+++...+.. ++++.|+.... .++++++++++++
T Consensus 78 ~l~~~-G~~v~vg~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la~ 130 (130)
T PF00107_consen 78 LLRPG-GRIVVVGVYG-GDPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLAQ 130 (130)
T ss_dssp HEEEE-EEEEEESSTS-TSEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH-
T ss_pred HhccC-CEEEEEEccC-CCCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhcC
Confidence 99996 9999999975 4566777666655 99999998764 4688888888753
|
1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: |
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.1e-12 Score=121.76 Aligned_cols=175 Identities=15% Similarity=0.176 Sum_probs=133.7
Q ss_pred hhhhhhcCC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhc
Q 017431 175 LGAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 175 ~~~l~~~~~-~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~ 253 (371)
+.++.+..+ ..+|++|+|+|+|.+|+.+++.++.+|+ +|++++.++.|.+.++++|+..+ + ..+.+
T Consensus 189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~-------~~e~v---- 255 (413)
T cd00401 189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T-------MEEAV---- 255 (413)
T ss_pred HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c-------HHHHH----
Confidence 344444433 4789999999999999999999999999 89999999999999999998432 1 11222
Q ss_pred CCCccEEEEccCCHHHHHHH-HHHhccCCceEEEEccCCCCCcccccchheee-ceEEEeeecCCCcccCcHH--HHHHH
Q 017431 254 DGGVDYSFECIGNVSVMRAA-LECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVP--WLVDK 329 (371)
Q Consensus 254 ~gg~dvvid~~g~~~~~~~~-~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~--~~~~~ 329 (371)
.++|++++|+|.+..+... +++++++ |+++.+|.. ..+++...+.. ++++.++..... ..+++ ..+.+
T Consensus 256 -~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~----~~eId~~~L~~~el~i~g~~~~~~--~~~~~~g~aI~L 327 (413)
T cd00401 256 -KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF----DVEIDVKGLKENAVEVVNIKPQVD--RYELPDGRRIIL 327 (413)
T ss_pred -cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC----CCccCHHHHHhhccEEEEccCCcc--eEEcCCcchhhh
Confidence 2589999999998888876 9999996 999999864 23444444443 677777654321 12455 78999
Q ss_pred HHcCCC-CCCCceeee-----eecc-cHHHHHHHHhCCCee--EEEEecC
Q 017431 330 YMKKEI-KVDEYVTHN-----MTLG-EINEAFRYMHGGDCL--RCVLKMQ 370 (371)
Q Consensus 330 ~~~~~~-~~~~~i~~~-----~~~~-~~~~A~~~~~~~~~~--kvvl~~~ 370 (371)
+++|++ ++...++|. |+|+ |+.+++..+.+++.. |+++.++
T Consensus 328 La~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~ 377 (413)
T cd00401 328 LAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK 377 (413)
T ss_pred hhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence 999999 888888888 8999 999999999887653 7877653
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=4e-11 Score=115.87 Aligned_cols=154 Identities=18% Similarity=0.231 Sum_probs=112.9
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE-ecCCCC-----------CchHHHHHH
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDH-----------DKPIQQVLV 250 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~-----------~~~~~~~~~ 250 (371)
+..++++|+|+|+|.+|++|++.|+.+|+ +|++++.++++++.++++|++.+ ++..+. ..++.+..+
T Consensus 161 G~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~ 239 (509)
T PRK09424 161 GKVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM 239 (509)
T ss_pred CCcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence 45689999999999999999999999999 89999999999999999999854 554331 112333323
Q ss_pred hh-cC--CCccEEEEccCC-----HHHH-HHHHHHhccCCceEEEEccCCCC-Ccccccchhee--eceEEEeeecCCCc
Q 017431 251 DL-TD--GGVDYSFECIGN-----VSVM-RAALECCHKGWGTSVIVGVAASG-QEISTRPFQLV--TGRVWKGTAFGGFK 318 (371)
Q Consensus 251 ~~-~~--gg~dvvid~~g~-----~~~~-~~~~~~l~~~~G~iv~~g~~~~~-~~~~~~~~~~~--~~~~~~g~~~~~~~ 318 (371)
+. ++ +++|++|+|++. +.++ ++.++.++++ |+++++|....+ ...+.+...+. +++++.|+.. +.
T Consensus 240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n--~P 316 (509)
T PRK09424 240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTD--LP 316 (509)
T ss_pred HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCC--Cc
Confidence 32 33 279999999996 3354 9999999997 999999885322 13444434443 4888888763 22
Q ss_pred ccCcHH-HHHHHHHcCCCCCCCcee
Q 017431 319 SRSQVP-WLVDKYMKKEIKVDEYVT 342 (371)
Q Consensus 319 ~~~~~~-~~~~~~~~~~~~~~~~i~ 342 (371)
..++ ...+++.++.+++.++++
T Consensus 317 --~~~p~~As~lla~~~i~l~~lIt 339 (509)
T PRK09424 317 --SRLPTQSSQLYGTNLVNLLKLLC 339 (509)
T ss_pred --hhHHHHHHHHHHhCCccHHHHhc
Confidence 3455 588999998887766554
|
|
| >PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.2e-11 Score=98.85 Aligned_cols=122 Identities=20% Similarity=0.213 Sum_probs=76.4
Q ss_pred cCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccC--CHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeece
Q 017431 230 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG--NVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGR 307 (371)
Q Consensus 230 ~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g--~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~ 307 (371)
||+++++|+++ .++ ...+++|+|||++| ....+..++++| ++ |++|.++. ....+.........
T Consensus 1 LGAd~vidy~~--~~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~----~~~~~~~~~~~~~~ 66 (127)
T PF13602_consen 1 LGADEVIDYRD--TDF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG----DLPSFARRLKGRSI 66 (127)
T ss_dssp CT-SEEEETTC--SHH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S----HHHHHHHHHHCHHC
T ss_pred CCcCEEecCCC--ccc------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC----cccchhhhhcccce
Confidence 68999999986 555 22348999999999 655457788888 96 99999874 11111111101112
Q ss_pred EEEeee-cCCC-cccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEE
Q 017431 308 VWKGTA-FGGF-KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 367 (371)
Q Consensus 308 ~~~g~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl 367 (371)
+..... +... ...+.++.+++++++|++++ .+.++|||+++++|++.+++++.. |+||
T Consensus 67 ~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~--~i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 67 RYSFLFSVDPNAIRAEALEELAELVAEGKLKP--PIDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp EEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred EEEEEEecCCCchHHHHHHHHHHHHHCCCeEE--eeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 221111 0000 12245999999999999775 478999999999999999999987 9986
|
|
| >PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.53 E-value=6.4e-07 Score=81.26 Aligned_cols=167 Identities=20% Similarity=0.286 Sum_probs=101.2
Q ss_pred cCCCCCCCEEEEEcCChHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHHhc----CCcEEecCCCCCchHHHHHHhhcCC
Q 017431 181 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 181 ~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~-~v~~v~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~~~~~~~~g 255 (371)
...+++|++||.+|+|. |..++++++..|.. +|++++.+++..+.+++. +...+- ... .++. .+ ...++
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~-~~~--~d~~-~l-~~~~~ 145 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVE-FRL--GEIE-AL-PVADN 145 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEE-EEE--cchh-hC-CCCCC
Confidence 35688999999999987 88888888888763 799999999988887753 332211 000 1111 11 12234
Q ss_pred CccEEEEcc------CCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCCcccCcHHHHHHH
Q 017431 256 GVDYSFECI------GNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDK 329 (371)
Q Consensus 256 g~dvvid~~------g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 329 (371)
.||+|+... .....++.+.+.|+++ |+++..+..... .+ + ..+.....+.+...... .....+.++
T Consensus 146 ~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~~~-~~--~-~~~~~~~~~~~~~~~~~---~~~~e~~~~ 217 (272)
T PRK11873 146 SVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVLRG-EL--P-EEIRNDAELYAGCVAGA---LQEEEYLAM 217 (272)
T ss_pred ceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeeccC-CC--C-HHHHHhHHHHhccccCC---CCHHHHHHH
Confidence 799998543 2346799999999997 999987654321 11 1 11111111111111111 245566677
Q ss_pred HHcCCCC-CCCceeeeeecccHHHHHHHH--hCCC
Q 017431 330 YMKKEIK-VDEYVTHNMTLGEINEAFRYM--HGGD 361 (371)
Q Consensus 330 ~~~~~~~-~~~~i~~~~~~~~~~~A~~~~--~~~~ 361 (371)
+.+..+. ......+.++++++.++++.+ .++.
T Consensus 218 l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~ 252 (272)
T PRK11873 218 LAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGR 252 (272)
T ss_pred HHHCCCCceEEEeccceecccHHHHHHHhcccccc
Confidence 7664433 222345678899999999988 4443
|
|
| >TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit | Back alignment and domain information |
|---|
Probab=98.53 E-value=7.7e-07 Score=86.18 Aligned_cols=127 Identities=20% Similarity=0.273 Sum_probs=89.8
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE-ecCCC-----------CCchHHHHHHh
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKD-----------HDKPIQQVLVD 251 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~-----------~~~~~~~~~~~ 251 (371)
..++++|+|+|+|.+|++++++++.+|+ .|++++.++++++.++++|++.+ ++..+ ...++.+..++
T Consensus 161 ~vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~ 239 (511)
T TIGR00561 161 KVPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEME 239 (511)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHH
Confidence 3467999999999999999999999999 79999999999999999998653 33211 01233333333
Q ss_pred hcC---CCccEEEEcc---CCHH---HHHHHHHHhccCCceEEEEccCCCCCccccc-chh-eee--ceEEEeee
Q 017431 252 LTD---GGVDYSFECI---GNVS---VMRAALECCHKGWGTSVIVGVAASGQEISTR-PFQ-LVT--GRVWKGTA 313 (371)
Q Consensus 252 ~~~---gg~dvvid~~---g~~~---~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~-~~~-~~~--~~~~~g~~ 313 (371)
+.. .++|++|+|+ |.+. ..+..++.|+++ +.+|+++....+ .+.+. +.. +.. +.++.+..
T Consensus 240 ~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~GG-n~E~t~p~~~~~~~~GV~~~gv~ 312 (511)
T TIGR00561 240 LFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQGG-NCEYTKPGEVYTTENQVKVIGYT 312 (511)
T ss_pred HHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCCC-CEEEecCceEEEecCCEEEEeeC
Confidence 333 2799999999 5433 568889999997 999999875433 33333 222 222 36666654
|
In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff. |
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.1e-05 Score=76.84 Aligned_cols=103 Identities=25% Similarity=0.318 Sum_probs=78.2
Q ss_pred hhhhhhhcCCCC-CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhh
Q 017431 174 GLGAVWNTAKVE-PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDL 252 (371)
Q Consensus 174 a~~~l~~~~~~~-~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~ 252 (371)
+|.++.+..++. .|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|.. +.+ +.+.+
T Consensus 198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~~-------l~eal--- 265 (425)
T PRK05476 198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VMT-------MEEAA--- 265 (425)
T ss_pred hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ecC-------HHHHH---
Confidence 345554443444 89999999999999999999999999 899999988877666666653 221 22222
Q ss_pred cCCCccEEEEccCCHHHHH-HHHHHhccCCceEEEEccCC
Q 017431 253 TDGGVDYSFECIGNVSVMR-AALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 253 ~~gg~dvvid~~g~~~~~~-~~~~~l~~~~G~iv~~g~~~ 291 (371)
.++|++++++|..+.+. ..+..|+++ +.++..|...
T Consensus 266 --~~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d 302 (425)
T PRK05476 266 --ELGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFD 302 (425)
T ss_pred --hCCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCC
Confidence 16999999999988776 678888996 8888888754
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=98.21 E-value=2.3e-05 Score=71.68 Aligned_cols=95 Identities=23% Similarity=0.336 Sum_probs=74.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
.+++|+|+|+|.+|.++++.++.+|+ +|++++++.++.+.++++|...+ .. .+ +.+.. .++|+||+|++
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~----~~----l~~~l-~~aDiVI~t~p 219 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL----SE----LAEEV-GKIDIIFNTIP 219 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH----HH----HHHHh-CCCCEEEECCC
Confidence 68999999999999999999999999 99999999888888888886432 11 11 22221 26999999998
Q ss_pred CHHHHHHHHHHhccCCceEEEEccCCC
Q 017431 266 NVSVMRAALECCHKGWGTSVIVGVAAS 292 (371)
Q Consensus 266 ~~~~~~~~~~~l~~~~G~iv~~g~~~~ 292 (371)
..-..+..++.++++ +.+++++....
T Consensus 220 ~~~i~~~~l~~~~~g-~vIIDla~~pg 245 (296)
T PRK08306 220 ALVLTKEVLSKMPPE-ALIIDLASKPG 245 (296)
T ss_pred hhhhhHHHHHcCCCC-cEEEEEccCCC
Confidence 754557778889996 99999977543
|
|
| >TIGR00936 ahcY adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=98.19 E-value=2.4e-05 Score=74.05 Aligned_cols=102 Identities=25% Similarity=0.340 Sum_probs=77.5
Q ss_pred hhhhhhcCC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhc
Q 017431 175 LGAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 175 ~~~l~~~~~-~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~ 253 (371)
+.++.+..+ ...|++|+|+|.|.+|...++.++.+|+ +|++++.++.+...++..|.. +.+ ..+.+
T Consensus 182 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-------leeal---- 248 (406)
T TIGR00936 182 IDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT-------MEEAA---- 248 (406)
T ss_pred HHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC-------HHHHH----
Confidence 334444433 4789999999999999999999999999 899998888877666666762 221 11222
Q ss_pred CCCccEEEEccCCHHHHHH-HHHHhccCCceEEEEccCC
Q 017431 254 DGGVDYSFECIGNVSVMRA-ALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 254 ~gg~dvvid~~g~~~~~~~-~~~~l~~~~G~iv~~g~~~ 291 (371)
.+.|++|+++|.+..++. .+..++++ +.++.+|...
T Consensus 249 -~~aDVVItaTG~~~vI~~~~~~~mK~G-ailiN~G~~~ 285 (406)
T TIGR00936 249 -KIGDIFITATGNKDVIRGEHFENMKDG-AIVANIGHFD 285 (406)
T ss_pred -hcCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEECCCC
Confidence 258999999999887765 88888996 8998887753
|
This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704). |
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=98.11 E-value=1.5e-07 Score=90.22 Aligned_cols=158 Identities=18% Similarity=0.195 Sum_probs=102.7
Q ss_pred cccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCC
Q 017431 59 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGT 138 (371)
Q Consensus 59 ~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~ 138 (371)
-|.|+++.+.+|++.+.+ +|+..+.. |+.|..| ++.|..... .|.. .++
T Consensus 90 ~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~---~g~~-l~~----------------- 138 (417)
T TIGR01035 90 TGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKT---VGKV-LER----------------- 138 (417)
T ss_pred CchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCC---chHH-HHH-----------------
Confidence 588999999999988766 56666666 8888888 445543332 2222 333
Q ss_pred cceeeeEEecccceEe---c-CCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeE
Q 017431 139 STFSQYTVVHDVSVAK---I-DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRV 214 (371)
Q Consensus 139 g~~a~~~~v~~~~v~~---l-P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v 214 (371)
.|++++.++. .+.. + +..+|...+|. .-..+..+..++++|+|+|+|.+|..+++.++..|+.+|
T Consensus 139 -lf~~a~~~~k-~vr~~t~i~~~~vSv~~~Av---------~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V 207 (417)
T TIGR01035 139 -LFQKAFSVGK-RVRTETDISAGAVSISSAAV---------ELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGKI 207 (417)
T ss_pred -HHHHHHHHhh-hhhhhcCCCCCCcCHHHHHH---------HHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCEE
Confidence 8888887765 3332 3 33333222221 001233344678999999999999999999999997689
Q ss_pred EEEcCChhhH-HHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHH
Q 017431 215 IGIDIDPKKF-DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 268 (371)
Q Consensus 215 ~~v~~~~~~~-~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~ 268 (371)
++++++.++. ++++++|.. .+.. .+..+.+ .++|+||+|++.+.
T Consensus 208 ~v~~rs~~ra~~la~~~g~~-~i~~----~~l~~~l-----~~aDvVi~aT~s~~ 252 (417)
T TIGR01035 208 LIANRTYERAEDLAKELGGE-AVKF----EDLEEYL-----AEADIVISSTGAPH 252 (417)
T ss_pred EEEeCCHHHHHHHHHHcCCe-EeeH----HHHHHHH-----hhCCEEEECCCCCC
Confidence 9999988774 477777763 2221 1222222 16999999998754
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >PLN02494 adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=98.06 E-value=4.2e-05 Score=73.15 Aligned_cols=101 Identities=25% Similarity=0.318 Sum_probs=78.1
Q ss_pred hhhhhhcCCC-CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhc
Q 017431 175 LGAVWNTAKV-EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 175 ~~~l~~~~~~-~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~ 253 (371)
+.++.+..++ -.|++|+|+|.|.+|...++.++.+|+ +|++++.++.+...+...|... + ...+.+.
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~v-v-------~leEal~--- 308 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQV-L-------TLEDVVS--- 308 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCee-c-------cHHHHHh---
Confidence 3344444443 679999999999999999999999999 8999998887766666677642 1 1222222
Q ss_pred CCCccEEEEccCCHHHH-HHHHHHhccCCceEEEEccC
Q 017431 254 DGGVDYSFECIGNVSVM-RAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 254 ~gg~dvvid~~g~~~~~-~~~~~~l~~~~G~iv~~g~~ 290 (371)
.+|++++++|..+.+ ...++.|+++ +.++.+|..
T Consensus 309 --~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr~ 343 (477)
T PLN02494 309 --EADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGHF 343 (477)
T ss_pred --hCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCCC
Confidence 489999999987754 8899999997 999999874
|
|
| >PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.05 E-value=2.9e-05 Score=69.49 Aligned_cols=129 Identities=25% Similarity=0.307 Sum_probs=81.8
Q ss_pred ceeeeEEecccceEecCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 017431 140 TFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI 219 (371)
Q Consensus 140 ~~a~~~~v~~~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~ 219 (371)
+|.+|.. +...++.+++++++..+..-. +.. ....+. ..+.++++||-+|+|. |..++.+++ .|+.+|++++.
T Consensus 78 ~~~~~~~-~~~~~i~i~p~~afgtg~h~t-t~~-~l~~l~--~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDi 150 (250)
T PRK00517 78 SWEDPPD-PDEINIELDPGMAFGTGTHPT-TRL-CLEALE--KLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDI 150 (250)
T ss_pred CCcCCCC-CCeEEEEECCCCccCCCCCHH-HHH-HHHHHH--hhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEEC
Confidence 4555533 667788899888766554211 111 111121 1256889999999986 888876554 67767999999
Q ss_pred ChhhHHHHHhc----CCcEEecCCCCCchHHHHHHhhcCC--CccEEEEccCCH---HHHHHHHHHhccCCceEEEEccC
Q 017431 220 DPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLTDG--GVDYSFECIGNV---SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 220 ~~~~~~~~~~~----g~~~vi~~~~~~~~~~~~~~~~~~g--g~dvvid~~g~~---~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
++...+.+++. +....+ ....+ .||+|+...... ..++.+.+.|+++ |.++..|..
T Consensus 151 s~~~l~~A~~n~~~~~~~~~~--------------~~~~~~~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi~ 215 (250)
T PRK00517 151 DPQAVEAARENAELNGVELNV--------------YLPQGDLKADVIVANILANPLLELAPDLARLLKPG-GRLILSGIL 215 (250)
T ss_pred CHHHHHHHHHHHHHcCCCceE--------------EEccCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEECc
Confidence 99887776643 221100 01112 599998755442 3467788889997 999987653
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=98.02 E-value=1.8e-05 Score=73.04 Aligned_cols=109 Identities=20% Similarity=0.194 Sum_probs=78.6
Q ss_pred cceEecCCCCCcchhhhccccchhhhhhhhhcCC---CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhH-H
Q 017431 150 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAK---VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF-D 225 (371)
Q Consensus 150 ~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~---~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~-~ 225 (371)
...+++|+.+..+.++... +...++.++..... -.++.+|+|+|+|.+|..+++.++..|+.+|++++++.++. +
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~ 217 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE 217 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 4677889999888777654 56666666422221 24789999999999999999999998887899999988764 6
Q ss_pred HHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHH
Q 017431 226 RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSV 269 (371)
Q Consensus 226 ~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~ 269 (371)
+++++|.. +++. .++.+.+ ..+|+||.|++.+..
T Consensus 218 la~~~g~~-~~~~----~~~~~~l-----~~aDvVi~at~~~~~ 251 (311)
T cd05213 218 LAKELGGN-AVPL----DELLELL-----NEADVVISATGAPHY 251 (311)
T ss_pred HHHHcCCe-EEeH----HHHHHHH-----hcCCEEEECCCCCch
Confidence 77888873 3322 1122222 158999999998664
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.0001 Score=69.64 Aligned_cols=98 Identities=20% Similarity=0.239 Sum_probs=68.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
++.+|+|+|+|.+|+.+++.++.+|+ +|+++++++++.+.+. .++........+ ...+.+.+ ..+|++|+|+
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~-~~~l~~~l-----~~aDvVI~a~ 238 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN-AYEIEDAV-----KRADLLIGAV 238 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC-HHHHHHHH-----ccCCEEEEcc
Confidence 34569999999999999999999999 7999999888877664 455432222211 11222222 2699999997
Q ss_pred C---C--HH-HHHHHHHHhccCCceEEEEccCC
Q 017431 265 G---N--VS-VMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 265 g---~--~~-~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
+ . +. ..+..++.++++ +.++.++...
T Consensus 239 ~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~ 270 (370)
T TIGR00518 239 LIPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQ 270 (370)
T ss_pred ccCCCCCCcCcCHHHHhcCCCC-CEEEEEecCC
Confidence 3 2 22 247777889996 9999998654
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.0002 Score=73.47 Aligned_cols=137 Identities=24% Similarity=0.319 Sum_probs=88.1
Q ss_pred ceeeeEEecccceEecCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc
Q 017431 140 TFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID 218 (371)
Q Consensus 140 ~~a~~~~v~~~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~ 218 (371)
++++|..+++..++.+ +..+.++|..... ......+|++|||+|+ |++|.+.++.+...|+ +|++++
T Consensus 386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~----------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~ 453 (681)
T PRK08324 386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQRM----------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD 453 (681)
T ss_pred hcCCccCCChhhhcce-eeehhhhhhhhcC----------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence 6677887887777777 6666666652210 0122346899999987 9999999999999999 899999
Q ss_pred CChhhHHHHH-hcCC--c-E--EecCCCCCchHHHHHHhhc--CCCccEEEEccCC------------------------
Q 017431 219 IDPKKFDRAK-NFGV--T-E--FVNPKDHDKPIQQVLVDLT--DGGVDYSFECIGN------------------------ 266 (371)
Q Consensus 219 ~~~~~~~~~~-~~g~--~-~--vi~~~~~~~~~~~~~~~~~--~gg~dvvid~~g~------------------------ 266 (371)
++.++.+.+. +++. . . ..|..+ .......+.+.. .+++|++|+++|.
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd-~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g 532 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTD-EAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATG 532 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCC-HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHH
Confidence 9887765443 3432 1 1 123333 122223333322 2379999999982
Q ss_pred -HHHHHHHHHHhcc---CCceEEEEccC
Q 017431 267 -VSVMRAALECCHK---GWGTSVIVGVA 290 (371)
Q Consensus 267 -~~~~~~~~~~l~~---~~G~iv~~g~~ 290 (371)
..+++.+++.+.+ + |+++.+++.
T Consensus 533 ~~~l~~~~~~~l~~~~~~-g~iV~vsS~ 559 (681)
T PRK08324 533 HFLVAREAVRIMKAQGLG-GSIVFIASK 559 (681)
T ss_pred HHHHHHHHHHHHHhcCCC-cEEEEECCc
Confidence 1234555666655 4 889998774
|
|
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.0003 Score=67.51 Aligned_cols=101 Identities=23% Similarity=0.320 Sum_probs=75.9
Q ss_pred hhhhhcC-CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcC
Q 017431 176 GAVWNTA-KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 176 ~~l~~~~-~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~ 254 (371)
.++.+.. ..-.|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|+.. . .+.+.+
T Consensus 242 d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~-~-------~leell----- 307 (476)
T PTZ00075 242 DGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQV-V-------TLEDVV----- 307 (476)
T ss_pred HHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCcee-c-------cHHHHH-----
Confidence 3444433 34689999999999999999999999999 8999988877665555556531 1 122222
Q ss_pred CCccEEEEccCCHHHHH-HHHHHhccCCceEEEEccCC
Q 017431 255 GGVDYSFECIGNVSVMR-AALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 255 gg~dvvid~~g~~~~~~-~~~~~l~~~~G~iv~~g~~~ 291 (371)
..+|+++.++|..+.+. ..++.|+++ +.++.+|...
T Consensus 308 ~~ADIVI~atGt~~iI~~e~~~~MKpG-AiLINvGr~d 344 (476)
T PTZ00075 308 ETADIFVTATGNKDIITLEHMRRMKNN-AIVGNIGHFD 344 (476)
T ss_pred hcCCEEEECCCcccccCHHHHhccCCC-cEEEEcCCCc
Confidence 15999999999877764 899999997 9999998753
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00019 Score=57.64 Aligned_cols=75 Identities=25% Similarity=0.342 Sum_probs=54.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHH-HHhcCCc--EEecCCCCCchHHHHHHhhcCCCccEEE
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR-AKNFGVT--EFVNPKDHDKPIQQVLVDLTDGGVDYSF 261 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~-~~~~g~~--~vi~~~~~~~~~~~~~~~~~~gg~dvvi 261 (371)
-+++++||+|+|++|.+++..+...|+++|+.+.|+.+|.+. +++++.. ..+...+ +.+.+ ..+|+++
T Consensus 10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~----~~~~~-----~~~DivI 80 (135)
T PF01488_consen 10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED----LEEAL-----QEADIVI 80 (135)
T ss_dssp GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG----HCHHH-----HTESEEE
T ss_pred cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH----HHHHH-----hhCCeEE
Confidence 357999999999999999999999999889999999887664 4556332 2333322 11111 1599999
Q ss_pred EccCCHH
Q 017431 262 ECIGNVS 268 (371)
Q Consensus 262 d~~g~~~ 268 (371)
+|++.+.
T Consensus 81 ~aT~~~~ 87 (135)
T PF01488_consen 81 NATPSGM 87 (135)
T ss_dssp E-SSTTS
T ss_pred EecCCCC
Confidence 9988753
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00073 Score=61.54 Aligned_cols=94 Identities=20% Similarity=0.267 Sum_probs=69.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
.|++|+|+|.|.+|.+.+..++.+|+ +|+++++++++.+.+.++|... +.. .++ .+.. .++|+++++++
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~-~~~----~~l----~~~l-~~aDiVint~P 218 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIP-FPL----NKL----EEKV-AEIDIVINTIP 218 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCee-ecH----HHH----HHHh-ccCCEEEECCC
Confidence 57899999999999999999999999 8999999888777776666532 111 112 2221 26999999997
Q ss_pred CHHHHHHHHHHhccCCceEEEEccCC
Q 017431 266 NVSVMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 266 ~~~~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
..-.-...++.++++ ..++.++...
T Consensus 219 ~~ii~~~~l~~~k~~-aliIDlas~P 243 (287)
T TIGR02853 219 ALVLTADVLSKLPKH-AVIIDLASKP 243 (287)
T ss_pred hHHhCHHHHhcCCCC-eEEEEeCcCC
Confidence 643335567778886 8888887744
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00021 Score=60.80 Aligned_cols=109 Identities=21% Similarity=0.225 Sum_probs=78.7
Q ss_pred hccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh----hHHHHHhcCCcEE-ecCCC
Q 017431 166 LLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK----KFDRAKNFGVTEF-VNPKD 240 (371)
Q Consensus 166 ~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~----~~~~~~~~g~~~v-i~~~~ 240 (371)
.+.-+...|. +.....++++++||=+|+| .|..++-+|+..+ +|+.+++.++ ..+.++.+|...+ +...+
T Consensus 54 tis~P~~vA~--m~~~L~~~~g~~VLEIGtG-sGY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gD 128 (209)
T COG2518 54 TISAPHMVAR--MLQLLELKPGDRVLEIGTG-SGYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRHGD 128 (209)
T ss_pred eecCcHHHHH--HHHHhCCCCCCeEEEECCC-chHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECC
Confidence 3433444443 4577889999999999997 6899999999888 8999999887 3344566887553 22333
Q ss_pred CCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEE
Q 017431 241 HDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 241 ~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
. ...+... .||.|+-+.+-+..-+.+++.|+++ |++|..
T Consensus 129 G-------~~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~P 168 (209)
T COG2518 129 G-------SKGWPEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIP 168 (209)
T ss_pred c-------ccCCCCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEE
Confidence 1 1223333 8999998888877678899999997 998765
|
|
| >TIGR00406 prmA ribosomal protein L11 methyltransferase | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00049 Score=62.86 Aligned_cols=96 Identities=24% Similarity=0.294 Sum_probs=63.0
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc----CCcE-EecCCCCCchHHHHHHhhcCCCcc
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTE-FVNPKDHDKPIQQVLVDLTDGGVD 258 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~----g~~~-vi~~~~~~~~~~~~~~~~~~gg~d 258 (371)
..++++||-+|+|. |..++.+++ .|+.+|++++.++...+.+++. +... +..... + ......++||
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~---~----~~~~~~~~fD 227 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI---Y----LEQPIEGKAD 227 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec---c----cccccCCCce
Confidence 45789999999986 877777765 5777999999999877666542 2211 110100 0 1112234899
Q ss_pred EEEEccCCH---HHHHHHHHHhccCCceEEEEcc
Q 017431 259 YSFECIGNV---SVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 259 vvid~~g~~---~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
+|+...... .++..+.+.|+++ |.++..|.
T Consensus 228 lVvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi 260 (288)
T TIGR00406 228 VIVANILAEVIKELYPQFSRLVKPG-GWLILSGI 260 (288)
T ss_pred EEEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeC
Confidence 998654432 3567778999997 99987765
|
Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis. |
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00051 Score=59.68 Aligned_cols=79 Identities=18% Similarity=0.305 Sum_probs=59.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCC----cEEecCCCCCchHHHHHHhhcCC--Cc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV----TEFVNPKDHDKPIQQVLVDLTDG--GV 257 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~----~~vi~~~~~~~~~~~~~~~~~~g--g~ 257 (371)
+++.++|+|| +++|.+.++.....|+ +|+.+.|..++++.+ .+++. ...+|..+ .......+..+... .+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD-~~~~~~~i~~~~~~~g~i 82 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTD-RAAVEAAIEALPEEFGRI 82 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCC-HHHHHHHHHHHHHhhCcc
Confidence 4578999999 8999999999999999 999999999988755 56772 22455554 13344445544444 69
Q ss_pred cEEEEccCC
Q 017431 258 DYSFECIGN 266 (371)
Q Consensus 258 dvvid~~g~ 266 (371)
|+.++..|-
T Consensus 83 DiLvNNAGl 91 (246)
T COG4221 83 DILVNNAGL 91 (246)
T ss_pred cEEEecCCC
Confidence 999998885
|
|
| >PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional | Back alignment and domain information |
|---|
Probab=97.52 E-value=9.8e-05 Score=74.09 Aligned_cols=80 Identities=26% Similarity=0.361 Sum_probs=58.7
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC---------------------hhhHHHHHhcCCcEEecCCC-
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID---------------------PKKFDRAKNFGVTEFVNPKD- 240 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~---------------------~~~~~~~~~~g~~~vi~~~~- 240 (371)
...+|++|+|+|+|+.|+++++.++.+|+ +|++++.. +.+.+.++++|++..++...
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 46789999999999999999999999999 78888742 34567778899876665422
Q ss_pred CCchHHHHHHhhcCCCccEEEEccCCHH
Q 017431 241 HDKPIQQVLVDLTDGGVDYSFECIGNVS 268 (371)
Q Consensus 241 ~~~~~~~~~~~~~~gg~dvvid~~g~~~ 268 (371)
.+... +.+ ..++|++|.++|...
T Consensus 212 ~~~~~-~~~----~~~~D~Vi~AtG~~~ 234 (564)
T PRK12771 212 EDITL-EQL----EGEFDAVFVAIGAQL 234 (564)
T ss_pred CcCCH-HHH----HhhCCEEEEeeCCCC
Confidence 11111 111 126999999999853
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00021 Score=68.92 Aligned_cols=159 Identities=18% Similarity=0.204 Sum_probs=94.8
Q ss_pred cccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCC
Q 017431 59 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGT 138 (371)
Q Consensus 59 ~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~ 138 (371)
-|+|+++-+.+|++...+.-+|+.- . |+.|. +.+..|..... .|.. .++
T Consensus 92 ~g~ea~~hl~~V~~GldS~V~GE~q-----I-lgQvk----~a~~~a~~~g~---~g~~-l~~----------------- 140 (423)
T PRK00045 92 EGEEAVRHLFRVASGLDSMVLGEPQ-----I-LGQVK----DAYALAQEAGT---VGTI-LNR----------------- 140 (423)
T ss_pred CCHHHHHHHHHHHhhhhhhhcCChH-----H-HHHHH----HHHHHHHHcCC---chHH-HHH-----------------
Confidence 4999999999999988775555533 2 44443 12222221111 1110 112
Q ss_pred cceeeeEEecccceEecCCCCCcchhhhccccchhhhhhhhhcC---CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEE
Q 017431 139 STFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTA---KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVI 215 (371)
Q Consensus 139 g~~a~~~~v~~~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~---~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~ 215 (371)
.|+..+ ++|..+..+.+. ...+...++.++.... +-.++++|+|+|+|.+|.++++.++..|+.+|+
T Consensus 141 -lf~~a~--------~~~k~v~~~t~i-~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~ 210 (423)
T PRK00045 141 -LFQKAF--------SVAKRVRTETGI-GAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKIT 210 (423)
T ss_pred -HHHHHH--------HHHhhHhhhcCC-CCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEE
Confidence 444433 334433322222 2224455555542221 235789999999999999999999999988899
Q ss_pred EEcCChhhHH-HHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHH
Q 017431 216 GIDIDPKKFD-RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 268 (371)
Q Consensus 216 ~v~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~ 268 (371)
+++++.++.+ +++++|.. ++.. .+..+.+ .++|+||+|++.++
T Consensus 211 v~~r~~~ra~~la~~~g~~-~~~~----~~~~~~l-----~~aDvVI~aT~s~~ 254 (423)
T PRK00045 211 VANRTLERAEELAEEFGGE-AIPL----DELPEAL-----AEADIVISSTGAPH 254 (423)
T ss_pred EEeCCHHHHHHHHHHcCCc-EeeH----HHHHHHh-----ccCCEEEECCCCCC
Confidence 9999887754 77778753 3221 1121111 26999999999754
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0055 Score=55.43 Aligned_cols=77 Identities=23% Similarity=0.370 Sum_probs=53.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE-ecCCCCCchHHHHHHhhcC--CCccEEEEc
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTD--GGVDYSFEC 263 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~--gg~dvvid~ 263 (371)
+++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+.+...+ .|..+ .....+.+..... +++|+++++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id~vi~~ 79 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVND-GAALARLAEELEAEHGGLDVLINN 79 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCC-HHHHHHHHHHHHHhcCCCCEEEEC
Confidence 47899988 9999999999989999 89999888877766655554332 34433 1233333333322 379999999
Q ss_pred cCC
Q 017431 264 IGN 266 (371)
Q Consensus 264 ~g~ 266 (371)
.|.
T Consensus 80 ag~ 82 (274)
T PRK05693 80 AGY 82 (274)
T ss_pred CCC
Confidence 883
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0062 Score=53.67 Aligned_cols=102 Identities=25% Similarity=0.340 Sum_probs=66.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc---CCcEEe--cCCCCCchHHHHHHhhcC--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF---GVTEFV--NPKDHDKPIQQVLVDLTD--GG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~---g~~~vi--~~~~~~~~~~~~~~~~~~--gg 256 (371)
++++|||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +++ +..+.+ |..+ .....+.+.+... ++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 81 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSS-TESARNVIEKAAKVLNA 81 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence 4689999988 9999999999999999 899998988766544 222 222222 2222 1222222322221 36
Q ss_pred ccEEEEccCCH-----------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 257 VDYSFECIGNV-----------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 257 ~dvvid~~g~~-----------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+|.++++.+.. ..++..++.+.++ |+++.+++.
T Consensus 82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~ 137 (238)
T PRK05786 82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSM 137 (238)
T ss_pred CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecc
Confidence 89999888741 1245566667775 899988764
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0049 Score=55.74 Aligned_cols=79 Identities=22% Similarity=0.339 Sum_probs=54.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE-ecCCCCCchHHHHHHhhc--CCCccEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYSF 261 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~--~gg~dvvi 261 (371)
++++++|+|+ |.+|.+.++.+...|+ +|+++++++++.+.+.+.+...+ .|..+ ...+...+.+.. .+++|+++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~~~id~li 79 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTD-EASIKAAVDTIIAEEGRIDVLV 79 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCC-HHHHHHHHHHHHHhcCCCCEEE
Confidence 4678999988 9999999999888999 89999888887665554454332 34333 123333333322 23799999
Q ss_pred EccCC
Q 017431 262 ECIGN 266 (371)
Q Consensus 262 d~~g~ 266 (371)
++.|.
T Consensus 80 ~~ag~ 84 (273)
T PRK06182 80 NNAGY 84 (273)
T ss_pred ECCCc
Confidence 98874
|
|
| >PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0068 Score=52.11 Aligned_cols=101 Identities=27% Similarity=0.437 Sum_probs=69.0
Q ss_pred hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHH----hcCC-cEEecCCCCCchHHHHHHhhc
Q 017431 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAK----NFGV-TEFVNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~v~~v~~~~~~~~~~~----~~g~-~~vi~~~~~~~~~~~~~~~~~ 253 (371)
...++.++++||-+|+|. |..++.+++..+. .+|++++.+++..+.++ +++. +.+.... .+..+.+...
T Consensus 34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~---~d~~~~l~~~- 108 (198)
T PRK00377 34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK---GEAPEILFTI- 108 (198)
T ss_pred HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE---echhhhHhhc-
Confidence 456788999999999987 8999999988753 48999999998777654 4552 2221111 1122222222
Q ss_pred CCCccEEEEccCC---HHHHHHHHHHhccCCceEEE
Q 017431 254 DGGVDYSFECIGN---VSVMRAALECCHKGWGTSVI 286 (371)
Q Consensus 254 ~gg~dvvid~~g~---~~~~~~~~~~l~~~~G~iv~ 286 (371)
.+.+|.||...+. ...++.+.+.|+++ |+++.
T Consensus 109 ~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~ 143 (198)
T PRK00377 109 NEKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVI 143 (198)
T ss_pred CCCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEE
Confidence 2379999975443 45688888999997 99885
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0065 Score=51.55 Aligned_cols=80 Identities=18% Similarity=0.236 Sum_probs=59.4
Q ss_pred CCCEEEEEcC--ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCcE-EecCCCC--CchHHHHHHhhcCCCccE
Q 017431 186 PGSIVAVFGL--GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTE-FVNPKDH--DKPIQQVLVDLTDGGVDY 259 (371)
Q Consensus 186 ~g~~VlI~Ga--g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~-vi~~~~~--~~~~~~~~~~~~~gg~dv 259 (371)
..+.|||+|+ |++|.+...-....|+ .|+++.+.-++...+. ++|... -+|..+. -..+..+++..++|+.|+
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~ 84 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL 84 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence 4578999965 8999999988889999 9999999998887665 777633 2343331 123455666667779999
Q ss_pred EEEccCC
Q 017431 260 SFECIGN 266 (371)
Q Consensus 260 vid~~g~ 266 (371)
.++..|.
T Consensus 85 L~NNAG~ 91 (289)
T KOG1209|consen 85 LYNNAGQ 91 (289)
T ss_pred EEcCCCC
Confidence 9997775
|
|
| >TIGR00438 rrmJ cell division protein FtsJ | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.011 Score=50.32 Aligned_cols=101 Identities=21% Similarity=0.249 Sum_probs=63.0
Q ss_pred cCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE-ecCCCCCchHHHHHHhhcCC-Ccc
Q 017431 181 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDG-GVD 258 (371)
Q Consensus 181 ~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~g-g~d 258 (371)
...+++|++||.+|+|+-+.+.....+..+..+|++++.++.+ ...++..+ .+..+ ....+.+.+..+. ++|
T Consensus 27 ~~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~--~~~~~~l~~~~~~~~~D 100 (188)
T TIGR00438 27 FKLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTD--EEVLNKIRERVGDDKVD 100 (188)
T ss_pred hcccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCC--hhHHHHHHHHhCCCCcc
Confidence 4567899999999987655544444444444489999998864 11233211 12222 2333445554555 899
Q ss_pred EEEE-cc----CC------------HHHHHHHHHHhccCCceEEEEc
Q 017431 259 YSFE-CI----GN------------VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 259 vvid-~~----g~------------~~~~~~~~~~l~~~~G~iv~~g 288 (371)
+|+. .. |. ..+++.+.++|+++ |+++...
T Consensus 101 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~ 146 (188)
T TIGR00438 101 VVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKV 146 (188)
T ss_pred EEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEE
Confidence 9995 22 21 34678889999997 9988753
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0064 Score=54.67 Aligned_cols=111 Identities=21% Similarity=0.321 Sum_probs=68.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcE-E----ecCCCCCchHHHHHHhhc--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F----VNPKDHDKPIQQVLVDLT-- 253 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-v----i~~~~~~~~~~~~~~~~~-- 253 (371)
.|+.|+|+|| +++|.+.+.-.-..|+ +++.+.+..++++.+ ++.+..+ + .|-.+ ..+....+.+..
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~-~~~~~~~~~~~~~~ 88 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSD-EESVKKFVEWAIRH 88 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCC-HHHHHHHHHHHHHh
Confidence 4689999999 8999987777777799 666666777666555 3444433 2 22222 122222222221
Q ss_pred CCCccEEEEccCCH-------------------------HHHHHHHHHhccCC-ceEEEEccCCCCCcccc
Q 017431 254 DGGVDYSFECIGNV-------------------------SVMRAALECCHKGW-GTSVIVGVAASGQEIST 298 (371)
Q Consensus 254 ~gg~dvvid~~g~~-------------------------~~~~~~~~~l~~~~-G~iv~~g~~~~~~~~~~ 298 (371)
-|++|+.+|..|-. ...+.++..|.+.. |+||.+++......+++
T Consensus 89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~ 159 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPF 159 (282)
T ss_pred cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCc
Confidence 24899999977741 23566777776533 99999987654443333
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0044 Score=52.34 Aligned_cols=92 Identities=30% Similarity=0.376 Sum_probs=62.5
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEE
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE 262 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid 262 (371)
.--.|++|.|+|.|.+|...++.++.+|+ +|++.++.........+.+.. . .++.+.+.+ .|+|+.
T Consensus 32 ~~l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~----~----~~l~ell~~-----aDiv~~ 97 (178)
T PF02826_consen 32 RELRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVE----Y----VSLDELLAQ-----ADIVSL 97 (178)
T ss_dssp S-STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEE----E----SSHHHHHHH------SEEEE
T ss_pred cccCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhcccccce----e----eehhhhcch-----hhhhhh
Confidence 34568999999999999999999999999 999999988866644555542 1 223333333 888888
Q ss_pred ccCC-H---H-HHHHHHHHhccCCceEEEEcc
Q 017431 263 CIGN-V---S-VMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 263 ~~g~-~---~-~~~~~~~~l~~~~G~iv~~g~ 289 (371)
+... + . .-...++.|+++ ..+|.++.
T Consensus 98 ~~plt~~T~~li~~~~l~~mk~g-a~lvN~aR 128 (178)
T PF02826_consen 98 HLPLTPETRGLINAEFLAKMKPG-AVLVNVAR 128 (178)
T ss_dssp -SSSSTTTTTSBSHHHHHTSTTT-EEEEESSS
T ss_pred hhccccccceeeeeeeeeccccc-eEEEeccc
Confidence 7663 1 1 135667778885 77776643
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0083 Score=55.48 Aligned_cols=102 Identities=18% Similarity=0.196 Sum_probs=70.7
Q ss_pred hhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHH----hcCCcEEecCCCCCchHHHHHHhhc
Q 017431 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 179 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~v~~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~ 253 (371)
.....++++++||.+|+| .|..++.+++..+. ..|++++.+++..+.++ +.|.+.+.... .+..+.+..
T Consensus 73 l~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~---gD~~~~~~~-- 146 (322)
T PRK13943 73 MEWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC---GDGYYGVPE-- 146 (322)
T ss_pred HHhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe---CChhhcccc--
Confidence 345568899999999997 59999999998864 36999999988655544 46664432211 111111111
Q ss_pred CCCccEEEEccCCHHHHHHHHHHhccCCceEEEE
Q 017431 254 DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 254 ~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
.+.+|+|+.+.+-++.....++.|+++ |+++..
T Consensus 147 ~~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~ 179 (322)
T PRK13943 147 FAPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP 179 (322)
T ss_pred cCCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence 136999999888766677888999997 998764
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0076 Score=54.66 Aligned_cols=79 Identities=16% Similarity=0.243 Sum_probs=55.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE-ecCCCCCchHHHHHHh---hcCCCccEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVD---LTDGGVDYS 260 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~---~~~gg~dvv 260 (371)
.+++|||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+.+...+ .|..+ .......+.+ ...+.+|++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~~g~id~l 80 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAE-PESIAALVAQVLELSGGRLDAL 80 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCC-HHHHHHHHHHHHHHcCCCccEE
Confidence 3578999988 9999999998888999 89999998888776666555433 34433 1222222332 233479999
Q ss_pred EEccCC
Q 017431 261 FECIGN 266 (371)
Q Consensus 261 id~~g~ 266 (371)
+++.|.
T Consensus 81 i~~Ag~ 86 (277)
T PRK05993 81 FNNGAY 86 (277)
T ss_pred EECCCc
Confidence 998763
|
|
| >COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0059 Score=55.26 Aligned_cols=129 Identities=25% Similarity=0.327 Sum_probs=74.1
Q ss_pred cceEecCCCCCcchhhhccccchhhhhhhhh-cCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 017431 150 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN-TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 228 (371)
Q Consensus 150 ~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~-~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~ 228 (371)
..+.++.+.+.+ .......|++. |.. ...+++|.+||=+|+| .|.++|..++ +|+.+|++++.++-..+.++
T Consensus 130 ~~~i~lDPGlAF----GTG~HpTT~lc-L~~Le~~~~~g~~vlDvGcG-SGILaIAa~k-LGA~~v~g~DiDp~AV~aa~ 202 (300)
T COG2264 130 ELNIELDPGLAF----GTGTHPTTSLC-LEALEKLLKKGKTVLDVGCG-SGILAIAAAK-LGAKKVVGVDIDPQAVEAAR 202 (300)
T ss_pred ceEEEEcccccc----CCCCChhHHHH-HHHHHHhhcCCCEEEEecCC-hhHHHHHHHH-cCCceEEEecCCHHHHHHHH
Confidence 455666555533 23333444433 222 2235689999888885 4666665544 58889999999986555444
Q ss_pred ----hcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc-CC--HHHHHHHHHHhccCCceEEEEccCC
Q 017431 229 ----NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI-GN--VSVMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 229 ----~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~-g~--~~~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
..+..... ... .........++.||+|+... -. ..+.+...+.++++ |+++.-|...
T Consensus 203 eNa~~N~v~~~~-~~~----~~~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl~ 266 (300)
T COG2264 203 ENARLNGVELLV-QAK----GFLLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPG-GRLILSGILE 266 (300)
T ss_pred HHHHHcCCchhh-hcc----cccchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeehH
Confidence 33443211 000 11112222234899999533 22 13467778889997 9999888753
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0042 Score=49.32 Aligned_cols=86 Identities=23% Similarity=0.322 Sum_probs=59.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
.++.+++++|.| .|...+..+..+|. .|++++.+++..+.+++.+...+.+--. +.+. .+. +++|+++.+-
T Consensus 15 ~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf-~p~~--~~y----~~a~liysir 85 (134)
T PRK04148 15 GKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLF-NPNL--EIY----KNAKLIYSIR 85 (134)
T ss_pred ccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCC-CCCH--HHH----hcCCEEEEeC
Confidence 456789999999 88755555557898 9999999999999998888755443211 1111 111 2799999988
Q ss_pred CCHHHHHHHHHHhcc
Q 017431 265 GNVSVMRAALECCHK 279 (371)
Q Consensus 265 g~~~~~~~~~~~l~~ 279 (371)
..++..+.+++.-++
T Consensus 86 pp~el~~~~~~la~~ 100 (134)
T PRK04148 86 PPRDLQPFILELAKK 100 (134)
T ss_pred CCHHHHHHHHHHHHH
Confidence 888866555554444
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.019 Score=50.50 Aligned_cols=101 Identities=22% Similarity=0.259 Sum_probs=62.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHH-HHHhcCCcEE-ecCCCCCchHHHHHHhhcCCCccEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFD-RAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSF 261 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~-~~~~~~-~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~gg~dvvi 261 (371)
++++|||+|+ |.+|.+.++.+...|+ +|+.+.+ ++++.+ +..+++...+ .|..+ ...+.+.+.+ .+++|+++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~-~~~~~~~~~~--~~~id~li 80 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSAD-RDAVIDVVRK--SGALDILV 80 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCC-HHHHHHHHHH--hCCCcEEE
Confidence 4789999988 9999999999999999 6766644 444433 3345565432 23322 1222233322 13699999
Q ss_pred EccCCHH-------------------------HHHHHHHHhccCCceEEEEccCC
Q 017431 262 ECIGNVS-------------------------VMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 262 d~~g~~~-------------------------~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
++.|... +...++..+..+ |+++.+++..
T Consensus 81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~isS~~ 134 (237)
T PRK12742 81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEG-GRIIIIGSVN 134 (237)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcC-CeEEEEeccc
Confidence 9887410 113444556665 8999887643
|
|
| >PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0045 Score=58.88 Aligned_cols=106 Identities=20% Similarity=0.263 Sum_probs=72.9
Q ss_pred hhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhh
Q 017431 173 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDL 252 (371)
Q Consensus 173 ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~ 252 (371)
..+..+.+..++++|++||-+|+| .|..+..+++..|+ +|++++.+++..+.+++.....-+.... .++ .+.
T Consensus 154 ~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~--~D~----~~l 225 (383)
T PRK11705 154 AKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL--QDY----RDL 225 (383)
T ss_pred HHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE--Cch----hhc
Confidence 334445677788999999999985 67778888988898 8999999999998887643211111111 112 111
Q ss_pred cCCCccEEEEc-----cCC---HHHHHHHHHHhccCCceEEEEc
Q 017431 253 TDGGVDYSFEC-----IGN---VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 253 ~~gg~dvvid~-----~g~---~~~~~~~~~~l~~~~G~iv~~g 288 (371)
.+.||.|+.. ++. +..++.+.+.|+++ |.++...
T Consensus 226 -~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~ 267 (383)
T PRK11705 226 -NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHT 267 (383)
T ss_pred -CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 2479988753 333 35688889999997 9988754
|
|
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.01 Score=48.63 Aligned_cols=94 Identities=26% Similarity=0.335 Sum_probs=59.8
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEE
Q 017431 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSF 261 (371)
Q Consensus 182 ~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvi 261 (371)
...-.|++++|.|-|.+|.-.++.++.+|+ +|++++.++-+.-.+.--|.. +. ...+.+ ...|+++
T Consensus 18 ~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~-v~-------~~~~a~-----~~adi~v 83 (162)
T PF00670_consen 18 NLMLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFE-VM-------TLEEAL-----RDADIFV 83 (162)
T ss_dssp -S--TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-E-EE--------HHHHT-----TT-SEEE
T ss_pred ceeeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcE-ec-------CHHHHH-----hhCCEEE
Confidence 345678999999999999999999999999 999999998766555545542 21 122222 2589999
Q ss_pred EccCCHHH-HHHHHHHhccCCceEEEEccC
Q 017431 262 ECIGNVSV-MRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 262 d~~g~~~~-~~~~~~~l~~~~G~iv~~g~~ 290 (371)
.++|..+. -.+-++.|+++ ..+...|.+
T Consensus 84 taTG~~~vi~~e~~~~mkdg-ail~n~Gh~ 112 (162)
T PF00670_consen 84 TATGNKDVITGEHFRQMKDG-AILANAGHF 112 (162)
T ss_dssp E-SSSSSSB-HHHHHHS-TT-EEEEESSSS
T ss_pred ECCCCccccCHHHHHHhcCC-eEEeccCcC
Confidence 99998664 35778888885 555555553
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.016 Score=50.99 Aligned_cols=79 Identities=23% Similarity=0.347 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcC---CcEEe--cCCCCCchHHHHHHhhcC--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFG---VTEFV--NPKDHDKPIQQVLVDLTD--GG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g---~~~vi--~~~~~~~~~~~~~~~~~~--gg 256 (371)
.+.+|||+|+ |.+|...++.+...|+ +|+++++++++.+.+ +++. ..+.+ |..+ ...+.+.+.+... ++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 82 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRD-EADVQRAVDAIVAAFGG 82 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCC-HHHHHHHHHHHHHHcCC
Confidence 4688999988 9999999888888899 799998887665433 3332 11222 2222 1233333333322 37
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|++|++.|.
T Consensus 83 ~d~vi~~ag~ 92 (237)
T PRK07326 83 LDVLIANAGV 92 (237)
T ss_pred CCEEEECCCC
Confidence 9999998764
|
|
| >PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0033 Score=52.51 Aligned_cols=102 Identities=22% Similarity=0.238 Sum_probs=66.5
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec-CCCC--------------CchHHHHHHh
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN-PKDH--------------DKPIQQVLVD 251 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~-~~~~--------------~~~~~~~~~~ 251 (371)
..+|+|+|+|.+|..|+.+++.+|+ +|+..+...++.+..+..+...+.. ..+. ...+...+.+
T Consensus 20 p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 98 (168)
T PF01262_consen 20 PAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE 98 (168)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred CeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence 4789999999999999999999999 8999999988888888777754322 1111 1223333333
Q ss_pred hcCCCccEEEEccC-----CHH-HHHHHHHHhccCCceEEEEccCC
Q 017431 252 LTDGGVDYSFECIG-----NVS-VMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 252 ~~~gg~dvvid~~g-----~~~-~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
... .+|+++.+.- .|. ..+..++.|+++ ..+++++...
T Consensus 99 ~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D~ 142 (168)
T PF01262_consen 99 FIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCDQ 142 (168)
T ss_dssp HHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGGG
T ss_pred HHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEecC
Confidence 221 4898885322 122 246777888986 8899887643
|
4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A .... |
| >COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.02 Score=47.85 Aligned_cols=103 Identities=27% Similarity=0.346 Sum_probs=69.3
Q ss_pred hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcEEecCCCCCchHHHHHHhhcCC
Q 017431 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~g 255 (371)
...++++|+.++=+|+| .|-.+++++...-..+|+++++++++.++.+ +||.+.+..... +..+.+.++.
T Consensus 28 s~L~~~~g~~l~DIGaG-tGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g---~Ap~~L~~~~-- 101 (187)
T COG2242 28 SKLRPRPGDRLWDIGAG-TGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEG---DAPEALPDLP-- 101 (187)
T ss_pred HhhCCCCCCEEEEeCCC-ccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEec---cchHhhcCCC--
Confidence 56678999977667885 3556677775554559999999999877664 588765432222 1222233221
Q ss_pred CccEEEEccCC--HHHHHHHHHHhccCCceEEEEcc
Q 017431 256 GVDYSFECIGN--VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 256 g~dvvid~~g~--~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
.+|.+|---|. +..++.+++.|+++ |++|.-..
T Consensus 102 ~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nai 136 (187)
T COG2242 102 SPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAI 136 (187)
T ss_pred CCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEee
Confidence 59999853332 45689999999997 99986644
|
|
| >PRK14967 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.056 Score=47.34 Aligned_cols=97 Identities=23% Similarity=0.221 Sum_probs=63.0
Q ss_pred cCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCcEEecCCCCCchHHHHHHhhcCCC
Q 017431 181 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDGG 256 (371)
Q Consensus 181 ~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~gg 256 (371)
...+.++++||-.|+|. |..++.+++. ++.+|++++.+++..+.+++ .+....+... ++.+. ...+.
T Consensus 31 ~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~----d~~~~---~~~~~ 101 (223)
T PRK14967 31 AEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRG----DWARA---VEFRP 101 (223)
T ss_pred hcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEEC----chhhh---ccCCC
Confidence 34567889999999986 8888888875 65689999999987765543 3432222221 22221 12237
Q ss_pred ccEEEEccCC---------------------------HHHHHHHHHHhccCCceEEEE
Q 017431 257 VDYSFECIGN---------------------------VSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 257 ~dvvid~~g~---------------------------~~~~~~~~~~l~~~~G~iv~~ 287 (371)
||+|+...+- ...+..+.+.|+++ |+++.+
T Consensus 102 fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~ 158 (223)
T PRK14967 102 FDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLV 158 (223)
T ss_pred eeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEE
Confidence 9999864210 12356678889997 998865
|
|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.012 Score=49.05 Aligned_cols=96 Identities=18% Similarity=0.203 Sum_probs=63.9
Q ss_pred hhccccchhhhhhhhhcCCCCCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCc
Q 017431 165 CLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGT-VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDK 243 (371)
Q Consensus 165 a~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~-vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~ 243 (371)
...|+....+...+.....--.|++|||+|+|. +|..++..++..|+ +|+++.+..+
T Consensus 22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~--------------------- 79 (168)
T cd01080 22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTK--------------------- 79 (168)
T ss_pred CccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCch---------------------
Confidence 444544444444444444456889999999986 59989999999999 7887765421
Q ss_pred hHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 244 PIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 244 ~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+..+.+. .+|+||.+++.++.+.. +.+.++ -.+++++..
T Consensus 80 ~l~~~l~-----~aDiVIsat~~~~ii~~--~~~~~~-~viIDla~p 118 (168)
T cd01080 80 NLKEHTK-----QADIVIVAVGKPGLVKG--DMVKPG-AVVIDVGIN 118 (168)
T ss_pred hHHHHHh-----hCCEEEEcCCCCceecH--HHccCC-eEEEEccCC
Confidence 1112222 49999999999774333 346664 677777664
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.024 Score=49.74 Aligned_cols=79 Identities=23% Similarity=0.256 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHH---hcCCcEE-ecCCCCCchHHHHHHhhcC--CCc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAK---NFGVTEF-VNPKDHDKPIQQVLVDLTD--GGV 257 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~---~~g~~~v-i~~~~~~~~~~~~~~~~~~--gg~ 257 (371)
+++++||+|+ |.+|...++.+...|+ +|+.++++.++.. .+. ..+...+ .|..+ ..+....+.+... +++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~ 83 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVD-PQAARRAVDEVNRQFGRL 83 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCC-HHHHHHHHHHHHHHhCCc
Confidence 4789999988 9999999998888899 7999988765432 222 2233221 22222 1222222332221 379
Q ss_pred cEEEEccCC
Q 017431 258 DYSFECIGN 266 (371)
Q Consensus 258 dvvid~~g~ 266 (371)
|+++++.+.
T Consensus 84 d~vi~~ag~ 92 (239)
T PRK12828 84 DALVNIAGA 92 (239)
T ss_pred CEEEECCcc
Confidence 999998764
|
|
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0069 Score=58.04 Aligned_cols=76 Identities=13% Similarity=0.123 Sum_probs=54.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
-++.+|||+|+|.+|.+++..+...|+..++++.++.++.+ ++.+++...++. +. .+.+.. ..+|+||+|
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~-------~~-~l~~~l-~~aDiVI~a 249 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHY-------LS-ELPQLI-KKADIIIAA 249 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEec-------HH-HHHHHh-ccCCEEEEC
Confidence 46789999999999999999999999888999999877654 555565222222 11 112211 259999999
Q ss_pred cCCHHH
Q 017431 264 IGNVSV 269 (371)
Q Consensus 264 ~g~~~~ 269 (371)
++.++.
T Consensus 250 T~a~~~ 255 (414)
T PRK13940 250 VNVLEY 255 (414)
T ss_pred cCCCCe
Confidence 998653
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.018 Score=52.77 Aligned_cols=79 Identities=23% Similarity=0.381 Sum_probs=52.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHH-HHhcCC--cEE---ecCCCCCchHHHHHHhhcC--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR-AKNFGV--TEF---VNPKDHDKPIQQVLVDLTD--GG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~-~~~~g~--~~v---i~~~~~~~~~~~~~~~~~~--gg 256 (371)
+++++||+|+ |++|.+.++.+...|+ +|+++++++++.+. .++++. ... .|..+ ..+..+.+.+... ++
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~ 85 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTD-LAAMQAAAEEAVERFGG 85 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC-HHHHHHHHHHHHHHcCC
Confidence 5789999988 9999999999999999 89989888876553 344542 111 33333 1222233333222 37
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|+++++.|.
T Consensus 86 id~vI~nAG~ 95 (296)
T PRK05872 86 IDVVVANAGI 95 (296)
T ss_pred CCEEEECCCc
Confidence 9999999884
|
|
| >PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.074 Score=48.57 Aligned_cols=138 Identities=17% Similarity=0.121 Sum_probs=85.3
Q ss_pred ceeeeEEecccceEecCCCCCcchhhhccccchhhhhhhhhcC---CCCCCCEEEEEcC-ChHHHHHHHHHH-HcCCCeE
Q 017431 140 TFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTA---KVEPGSIVAVFGL-GTVGLAVAEGAK-AAGASRV 214 (371)
Q Consensus 140 ~~a~~~~v~~~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~---~~~~g~~VlI~Ga-g~vG~~ai~la~-~~g~~~v 214 (371)
.|-+|.++..+..+.- ......+..-| .+.|.|. |.+.. ..-..+.|+|.+| +-.++.....++ ..+..++
T Consensus 90 ~YN~Y~r~~~d~~y~~--~~e~~~~LlrP-Lf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~ 165 (314)
T PF11017_consen 90 IYNQYLRVSADPAYDP--EREDWQMLLRP-LFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV 165 (314)
T ss_pred hhhceeecCCCcccCc--chhHHHHHHHH-HHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence 4556666665543311 11112222223 4455554 22211 2234467788877 788888888777 5555589
Q ss_pred EEEcCChhhHHHHHhcCC-cEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 215 IGIDIDPKKFDRAKNFGV-TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 215 ~~v~~~~~~~~~~~~~g~-~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+.+++... ..+.+.+|. +.++.|++ +..+....--+++|+.|+..+...+.+.+....-..+.+|..
T Consensus 166 vglTS~~N-~~Fve~lg~Yd~V~~Yd~--------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~t 233 (314)
T PF11017_consen 166 VGLTSARN-VAFVESLGCYDEVLTYDD--------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGAT 233 (314)
T ss_pred EEEecCcc-hhhhhccCCceEEeehhh--------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEcc
Confidence 99966554 568888997 55776655 444444466789999999998888888888753456667764
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.014 Score=52.05 Aligned_cols=80 Identities=18% Similarity=0.292 Sum_probs=54.7
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc----CCcE-E--ecCCCCCchHHHHHHhhcC-
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF----GVTE-F--VNPKDHDKPIQQVLVDLTD- 254 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~----g~~~-v--i~~~~~~~~~~~~~~~~~~- 254 (371)
..+.++||+|| +++|...+..+-..|+ +++.+.|+++|++.+. ++ +..- + +|..+ ..+......++..
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~-~~~~~~l~~~l~~~ 81 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSD-PEALERLEDELKER 81 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCC-hhHHHHHHHHHHhc
Confidence 46789999999 8999998888888899 9999999999887553 33 2221 2 33333 1222222222222
Q ss_pred C-CccEEEEccCC
Q 017431 255 G-GVDYSFECIGN 266 (371)
Q Consensus 255 g-g~dvvid~~g~ 266 (371)
+ .+|+.+|++|-
T Consensus 82 ~~~IdvLVNNAG~ 94 (265)
T COG0300 82 GGPIDVLVNNAGF 94 (265)
T ss_pred CCcccEEEECCCc
Confidence 2 79999999986
|
|
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.014 Score=44.32 Aligned_cols=92 Identities=24% Similarity=0.259 Sum_probs=60.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
+|++|||+|+|.+|..-++.+...|+ +|++++... +..+ +.-... ... +. ..+ .++++|+.+++
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~-~~~----~~---~~l--~~~~lV~~at~ 69 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLI-RRE----FE---EDL--DGADLVFAATD 69 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEE-ESS-----G---GGC--TTESEEEE-SS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHH-hhh----HH---HHH--hhheEEEecCC
Confidence 57899999999999999999999999 888887764 2122 111111 111 21 011 27999999999
Q ss_pred CHHHHHHHHHHhccCCceEEEEccCCCCC
Q 017431 266 NVSVMRAALECCHKGWGTSVIVGVAASGQ 294 (371)
Q Consensus 266 ~~~~~~~~~~~l~~~~G~iv~~g~~~~~~ 294 (371)
.+..-+...+..+.. |.++...+.....
T Consensus 70 d~~~n~~i~~~a~~~-~i~vn~~D~p~~~ 97 (103)
T PF13241_consen 70 DPELNEAIYADARAR-GILVNVVDDPELC 97 (103)
T ss_dssp -HHHHHHHHHHHHHT-TSEEEETT-CCCC
T ss_pred CHHHHHHHHHHHhhC-CEEEEECCCcCCC
Confidence 988667777767764 9998886654333
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.021 Score=48.12 Aligned_cols=92 Identities=25% Similarity=0.306 Sum_probs=62.6
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE-ecCCCCCchHHHHHHhhcCCCccEEEEccCC-
Q 017431 190 VAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECIGN- 266 (371)
Q Consensus 190 VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~gg~dvvid~~g~- 266 (371)
|+|+|+ |.+|...++.+...|. +|+++.+++++.+. ..++..+ .+..+ . +.+.+... ++|.+|+++|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~~~~d~~d--~---~~~~~al~-~~d~vi~~~~~~ 71 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEIIQGDLFD--P---DSVKAALK-GADAVIHAAGPP 71 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEEEESCTTC--H---HHHHHHHT-TSSEEEECCHST
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccccceeeehh--h---hhhhhhhh-hcchhhhhhhhh
Confidence 789998 9999999999999998 99999999987766 4444333 22222 2 22333222 69999999984
Q ss_pred ---HHHHHHHHHHhccC-CceEEEEccC
Q 017431 267 ---VSVMRAALECCHKG-WGTSVIVGVA 290 (371)
Q Consensus 267 ---~~~~~~~~~~l~~~-~G~iv~~g~~ 290 (371)
.......++.+... -.+++.++..
T Consensus 72 ~~~~~~~~~~~~a~~~~~~~~~v~~s~~ 99 (183)
T PF13460_consen 72 PKDVDAAKNIIEAAKKAGVKRVVYLSSA 99 (183)
T ss_dssp TTHHHHHHHHHHHHHHTTSSEEEEEEET
T ss_pred cccccccccccccccccccccceeeecc
Confidence 23456666666542 1377777654
|
... |
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.025 Score=55.19 Aligned_cols=79 Identities=24% Similarity=0.349 Sum_probs=50.3
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh---HHHHHhcCCcEE-ecCCCCCchHHHHHHhhc--CCCc
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK---FDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGV 257 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~---~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~--~gg~ 257 (371)
.+++++||+|+ |++|.+.++.+...|+ +|+++++.+.. .++..+++...+ .|..+ .......+.... .+++
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g~i 285 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITA-PDAPARIAEHLAERHGGL 285 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCC-HHHHHHHHHHHHHhCCCC
Confidence 35789999988 9999999999999999 78888764322 233344554322 34433 122222222222 2379
Q ss_pred cEEEEccC
Q 017431 258 DYSFECIG 265 (371)
Q Consensus 258 dvvid~~g 265 (371)
|++|++.|
T Consensus 286 d~vi~~AG 293 (450)
T PRK08261 286 DIVVHNAG 293 (450)
T ss_pred CEEEECCC
Confidence 99999988
|
|
| >COG4122 Predicted O-methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.021 Score=49.40 Aligned_cols=105 Identities=23% Similarity=0.238 Sum_probs=72.3
Q ss_pred cCCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----cCCcEEe-cCCCCCchHHHHHHhhcC
Q 017431 181 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEFV-NPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 181 ~~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~v~~v~~~~~~~~~~~~----~g~~~vi-~~~~~~~~~~~~~~~~~~ 254 (371)
..+....++||=+|++ +|..++++|..+. -.+++.++.++++.+.+++ .|....+ -... .+..+.+.+...
T Consensus 54 L~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~--gdal~~l~~~~~ 130 (219)
T COG4122 54 LARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLG--GDALDVLSRLLD 130 (219)
T ss_pred HHHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEec--CcHHHHHHhccC
Confidence 4455577888888774 6888889999887 3489999999998877754 5665521 1111 245555555334
Q ss_pred CCccEEE-EccC--CHHHHHHHHHHhccCCceEEEEcc
Q 017431 255 GGVDYSF-ECIG--NVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 255 gg~dvvi-d~~g--~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
+.||+|| |+.- -+..++.+++.|++| |.+|.=..
T Consensus 131 ~~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~DNv 167 (219)
T COG4122 131 GSFDLVFIDADKADYPEYLERALPLLRPG-GLIVADNV 167 (219)
T ss_pred CCccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEeec
Confidence 5899988 4332 367799999999996 87775433
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.014 Score=52.01 Aligned_cols=77 Identities=25% Similarity=0.359 Sum_probs=53.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE-ecCCCCCchHH---HHHHhhcCCCccEEEE
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQ---QVLVDLTDGGVDYSFE 262 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~---~~~~~~~~gg~dvvid 262 (371)
++|||+|+ |.+|.+.++.+...|+ +|++++++.++.+.+++.+...+ .|..+. .... +.+.....+.+|.+++
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~i~~~~~~~~~~ii~ 80 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDDP-ESVERAADEVIALTDNRLYGLFN 80 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCCH-HHHHHHHHHHHHhcCCCCeEEEE
Confidence 57999998 9999999999999999 89999998888877777776443 233321 1222 2233333347888888
Q ss_pred ccCC
Q 017431 263 CIGN 266 (371)
Q Consensus 263 ~~g~ 266 (371)
+.|.
T Consensus 81 ~ag~ 84 (256)
T PRK08017 81 NAGF 84 (256)
T ss_pred CCCC
Confidence 8763
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.028 Score=49.82 Aligned_cols=101 Identities=22% Similarity=0.248 Sum_probs=61.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-hHH-HH---HhcCCcE-E--ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KFD-RA---KNFGVTE-F--VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~-~~~-~~---~~~g~~~-v--i~~~~~~~~~~~~~~~~~~-- 254 (371)
+++++||+|+ |.+|.+.+..+...|+ +|+++.++.+ +.+ +. +..+... . .|..+ ..+....+.+...
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 82 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD-EESVAALMDTAREEF 82 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHhC
Confidence 4679999988 9999999998888999 7888777543 222 22 2223221 1 23333 1222223332222
Q ss_pred CCccEEEEccCCH-------------------HHHHHHHHHhccCCceEEEEcc
Q 017431 255 GGVDYSFECIGNV-------------------SVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 255 gg~dvvid~~g~~-------------------~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
+++|+++.+.+.. .+++.+.+.+..+ |++|.+++
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS 135 (248)
T PRK07806 83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS 135 (248)
T ss_pred CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence 3689988877541 2355566666665 89998865
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.011 Score=49.95 Aligned_cols=79 Identities=19% Similarity=0.223 Sum_probs=54.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCc---EEecCCCC--CchHHHHHHhhcCCCccE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT---EFVNPKDH--DKPIQQVLVDLTDGGVDY 259 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~---~vi~~~~~--~~~~~~~~~~~~~gg~dv 259 (371)
-|-+|||+|. +++|++..+-...+|= +|+.+.+++++++.+++.... .+.|..+. ...+.+.+.+..+ ..++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P-~lNv 81 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP-NLNV 81 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC-chhe
Confidence 3679999955 8999999999999997 999999999999888764432 23343331 1113333332211 5889
Q ss_pred EEEccCC
Q 017431 260 SFECIGN 266 (371)
Q Consensus 260 vid~~g~ 266 (371)
+++++|-
T Consensus 82 liNNAGI 88 (245)
T COG3967 82 LINNAGI 88 (245)
T ss_pred eeecccc
Confidence 9998874
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.027 Score=50.27 Aligned_cols=79 Identities=19% Similarity=0.208 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh---cCCcE-E--ecCCCCCchHHHHHHhhcC--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN---FGVTE-F--VNPKDHDKPIQQVLVDLTD--GG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~---~g~~~-v--i~~~~~~~~~~~~~~~~~~--gg 256 (371)
+++++||+|+ |.+|...++.+...|+ +|+.+++++++.+..++ .+... . .|..+ .......+.+... ++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 83 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTD-DAQCRDAVEQTVAKFGR 83 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhcCC
Confidence 4679999988 8999998888888899 77888787766544433 33321 1 22222 1223333333222 37
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|+++++.|.
T Consensus 84 id~vi~~ag~ 93 (258)
T PRK08628 84 IDGLVNNAGV 93 (258)
T ss_pred CCEEEECCcc
Confidence 9999999883
|
|
| >TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0085 Score=46.82 Aligned_cols=100 Identities=23% Similarity=0.374 Sum_probs=65.9
Q ss_pred hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcE--EecCCCCCchHHHHHHhhc
Q 017431 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE--FVNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~--vi~~~~~~~~~~~~~~~~~ 253 (371)
....+.++++||-+|+|. |..+..+++..+..+|++++.++...+.++ +++... ++...- . ..+ ...
T Consensus 13 ~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~---~--~~~-~~~ 85 (124)
T TIGR02469 13 SKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDA---P--EAL-EDS 85 (124)
T ss_pred HHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccc---c--ccC-hhh
Confidence 444566788888899975 888888998875459999999998776654 344322 221110 0 001 111
Q ss_pred CCCccEEEEccCC---HHHHHHHHHHhccCCceEEEE
Q 017431 254 DGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 254 ~gg~dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~ 287 (371)
...+|+|+...+. ..+++.+.+.|+++ |+++.-
T Consensus 86 ~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~ 121 (124)
T TIGR02469 86 LPEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLN 121 (124)
T ss_pred cCCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEE
Confidence 1379999975433 34688999999997 998754
|
This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL. |
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.007 Score=55.08 Aligned_cols=76 Identities=13% Similarity=0.103 Sum_probs=50.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
++++|||+|+|+.+.+++.-+..+|+++|+++.|+.+|.+.+ .+++....+...+ +.+.+.... ..+|+|++|+
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~----~~~~~~~~~-~~~DiVInaT 198 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE----GDSGGLAIE-KAAEVLVSTV 198 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc----chhhhhhcc-cCCCEEEECC
Confidence 578999999999999999999999998999999998776544 4443211000000 001111111 2699999998
Q ss_pred CC
Q 017431 265 GN 266 (371)
Q Consensus 265 g~ 266 (371)
+.
T Consensus 199 p~ 200 (282)
T TIGR01809 199 PA 200 (282)
T ss_pred CC
Confidence 76
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.028 Score=50.41 Aligned_cols=79 Identities=32% Similarity=0.408 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCcE-E--ecCCCCCchHHHHHHhhcC--CCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTE-F--VNPKDHDKPIQQVLVDLTD--GGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~g~~~-v--i~~~~~~~~~~~~~~~~~~--gg~d 258 (371)
+++++||+|+ |.+|.+.++.+...|+ +|+.+++++++.+ +.++++... . .|..+ ..+..+.+.+... +.+|
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~id 82 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITD-DAAIERAVATVVARFGRVD 82 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4689999988 9999999999888999 8999988876544 444555321 1 23332 1223333333221 3689
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
+++++.|.
T Consensus 83 ~lv~~ag~ 90 (261)
T PRK08265 83 ILVNLACT 90 (261)
T ss_pred EEEECCCC
Confidence 99998773
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.01 Score=55.42 Aligned_cols=79 Identities=20% Similarity=0.370 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhc--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~--~g 255 (371)
++++|||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ ++.|.... .|..+ .....+.+.+.. .+
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 83 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD-ADQVKALATQAASFGG 83 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHhcC
Confidence 4689999988 9999999999999999 899998888776433 33454332 23332 122222222211 24
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|++++++|.
T Consensus 84 ~iD~lVnnAG~ 94 (330)
T PRK06139 84 RIDVWVNNVGV 94 (330)
T ss_pred CCCEEEECCCc
Confidence 79999999873
|
|
| >PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4) | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.014 Score=52.81 Aligned_cols=101 Identities=24% Similarity=0.347 Sum_probs=63.5
Q ss_pred hhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcE--EecCCCCCchHHHHHH
Q 017431 177 AVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE--FVNPKDHDKPIQQVLV 250 (371)
Q Consensus 177 ~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~--vi~~~~~~~~~~~~~~ 250 (371)
.+.+..++++|++||-+|+| -|-.++.+|+..|+ +|++++.++++.+.++ +.|... .+...+ + +
T Consensus 53 ~~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D----~----~ 122 (273)
T PF02353_consen 53 LLCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRLQD----Y----R 122 (273)
T ss_dssp HHHTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-----G----G
T ss_pred HHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEee----c----c
Confidence 35688899999999999987 67777788888899 9999999999887764 455421 121111 1 1
Q ss_pred hhcCCCccEEEE-----ccCC---HHHHHHHHHHhccCCceEEEEcc
Q 017431 251 DLTDGGVDYSFE-----CIGN---VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 251 ~~~~gg~dvvid-----~~g~---~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
+.. +.||.|+. .+|. +..++.+.+.|+++ |+++.-..
T Consensus 123 ~~~-~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~i 167 (273)
T PF02353_consen 123 DLP-GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQTI 167 (273)
T ss_dssp G----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEEE
T ss_pred ccC-CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEec
Confidence 221 27998876 3432 35689999999997 99875543
|
All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: |
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.04 Score=49.51 Aligned_cols=78 Identities=23% Similarity=0.308 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcE-E--ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~~~~~~~--g 255 (371)
+++++||+|+ |.+|.+.++.+...|+ +|+.+++++++.+.. .+.+... . .|..+ .......+.+... +
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~~ 85 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRD-YAAVEAAFAQIADEFG 85 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 5789999988 9999999998889999 899998877654322 2223221 1 23332 1223333333322 3
Q ss_pred CccEEEEccC
Q 017431 256 GVDYSFECIG 265 (371)
Q Consensus 256 g~dvvid~~g 265 (371)
++|+++++.|
T Consensus 86 ~iD~vi~~ag 95 (264)
T PRK07576 86 PIDVLVSGAA 95 (264)
T ss_pred CCCEEEECCC
Confidence 6899998875
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.029 Score=49.69 Aligned_cols=79 Identities=22% Similarity=0.278 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcC--Cc-EE--ecCCCCCchHHHHHHhhc--CCC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFG--VT-EF--VNPKDHDKPIQQVLVDLT--DGG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g--~~-~v--i~~~~~~~~~~~~~~~~~--~gg 256 (371)
+++++||+|+ |.+|...++.+...|+ +|+++++++++.+.+ .++. .. .. .|..+ ...+...+.+.. .+.
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 81 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSD-EADVEAAVAAALERFGS 81 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence 4679999988 9999999988888899 799999988765443 2322 11 11 22222 123333333221 137
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|+++++.|.
T Consensus 82 ~d~vi~~ag~ 91 (251)
T PRK07231 82 VDILVNNAGT 91 (251)
T ss_pred CCEEEECCCC
Confidence 9999998874
|
|
| >PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2 | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.0039 Score=53.96 Aligned_cols=101 Identities=24% Similarity=0.312 Sum_probs=65.4
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCC-eEEEEcCChhhHHH----HHhcCCcEE-ecCCCCCchHHHHHHh
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDR----AKNFGVTEF-VNPKDHDKPIQQVLVD 251 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~-~v~~v~~~~~~~~~----~~~~g~~~v-i~~~~~~~~~~~~~~~ 251 (371)
+.....+++|++||-+|+| .|..+.-+++..|.. +|+.++..++-.+. +++++...+ +...+ . ...
T Consensus 64 ~l~~L~l~pg~~VLeIGtG-sGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gd--g-----~~g 135 (209)
T PF01135_consen 64 MLEALDLKPGDRVLEIGTG-SGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGD--G-----SEG 135 (209)
T ss_dssp HHHHTTC-TT-EEEEES-T-TSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES---G-----GGT
T ss_pred HHHHHhcCCCCEEEEecCC-CcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcc--h-----hhc
Confidence 4566779999999999886 577777888877743 69999988864443 344566432 22222 1 111
Q ss_pred hcC-CCccEEEEccCCHHHHHHHHHHhccCCceEEEE
Q 017431 252 LTD-GGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 252 ~~~-gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
... +.||.|+-+.+-+..-...++.|+++ |++|..
T Consensus 136 ~~~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~p 171 (209)
T PF01135_consen 136 WPEEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAP 171 (209)
T ss_dssp TGGG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEE
T ss_pred cccCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEE
Confidence 112 38999998877767678899999997 999874
|
1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A .... |
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.031 Score=52.67 Aligned_cols=96 Identities=23% Similarity=0.218 Sum_probs=65.8
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcC---Cc-EEecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG---VT-EFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g---~~-~vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
.+|||+|+|.+|..+++.+-+.|-.+|++++++.++.+.+.... .. ..+|..+ .+++.++.. ++|+||++
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d-----~~al~~li~-~~d~VIn~ 75 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD-----VDALVALIK-DFDLVINA 75 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC-----hHHHHHHHh-cCCEEEEe
Confidence 57999999999999999988888559999999999888876654 21 2344443 223333332 36999999
Q ss_pred cCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 264 IGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 264 ~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
.+.......+-.|+..+ =.++....+
T Consensus 76 ~p~~~~~~i~ka~i~~g-v~yvDts~~ 101 (389)
T COG1748 76 APPFVDLTILKACIKTG-VDYVDTSYY 101 (389)
T ss_pred CCchhhHHHHHHHHHhC-CCEEEcccC
Confidence 99865454444555553 456665544
|
|
| >PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0071 Score=52.62 Aligned_cols=101 Identities=20% Similarity=0.270 Sum_probs=67.3
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----cCCcE--EecCCCCCchHHHHHH
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLV 250 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~v~~v~~~~~~~~~~~~----~g~~~--vi~~~~~~~~~~~~~~ 250 (371)
+.....++++++||-+|+| .|..+..+++..+. .+|++++.+++-.+.+++ .|... ++..+. ...+
T Consensus 68 ~~~~l~~~~g~~VLdIG~G-sG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~-~~~~----- 140 (212)
T PRK13942 68 MCELLDLKEGMKVLEIGTG-SGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDG-TLGY----- 140 (212)
T ss_pred HHHHcCCCCcCEEEEECCc-ccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCc-ccCC-----
Confidence 3456678899999999886 46677777777763 389999999887665543 44422 221111 0001
Q ss_pred hhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEE
Q 017431 251 DLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 251 ~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
...+.||+|+-....+...+..++.|+++ |+++..
T Consensus 141 -~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~ 175 (212)
T PRK13942 141 -EENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP 175 (212)
T ss_pred -CcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence 11237999986655556678889999997 998765
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.019 Score=50.26 Aligned_cols=77 Identities=17% Similarity=0.227 Sum_probs=50.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE--ecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF--VNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v--i~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
++|+|+|+ |.+|.+.+..+...|+ +|+++++++++.+.+++++.... .|..+ .....+.+.....+++|+++.++
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~id~vi~~a 79 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMND-PASLDQLLQRLQGQRFDLLFVNA 79 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCC-HHHHHHHHHHhhcCCCCEEEEcC
Confidence 57899988 9999998888888899 89999888876655554432222 23322 12233333333334799999887
Q ss_pred CC
Q 017431 265 GN 266 (371)
Q Consensus 265 g~ 266 (371)
|.
T Consensus 80 g~ 81 (225)
T PRK08177 80 GI 81 (225)
T ss_pred cc
Confidence 54
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.034 Score=52.01 Aligned_cols=79 Identities=18% Similarity=0.214 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~~--g 255 (371)
++++|||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++.|.... .|..+ .......+.+... +
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d-~~~v~~~~~~~~~~~g 84 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD-AEAVQAAADRAEEELG 84 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC-HHHHHHHHHHHHHHCC
Confidence 4679999988 9999999999988999 888888887765433 23454322 23333 1222222222211 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|++++++|.
T Consensus 85 ~iD~lInnAg~ 95 (334)
T PRK07109 85 PIDTWVNNAMV 95 (334)
T ss_pred CCCEEEECCCc
Confidence 79999998874
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.018 Score=51.44 Aligned_cols=79 Identities=28% Similarity=0.411 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEE-ecCCCCCchHHHHHHhhcC--CCccEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF-VNPKDHDKPIQQVLVDLTD--GGVDYS 260 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~v-i~~~~~~~~~~~~~~~~~~--gg~dvv 260 (371)
+|++|||+|+ |.+|.+.++.+...|+ +|+++++++++.+.. .+++...+ .|..+ .......+.+... +++|++
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~v 83 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTD-EDAVNALFDTAAETYGSVDIA 83 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 5789999988 9999999999999999 888888887665433 44543222 23333 1222223332221 368999
Q ss_pred EEccCC
Q 017431 261 FECIGN 266 (371)
Q Consensus 261 id~~g~ 266 (371)
+++.|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06057 84 FNNAGI 89 (255)
T ss_pred EECCCc
Confidence 998764
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.025 Score=49.98 Aligned_cols=77 Identities=25% Similarity=0.357 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEE-ecCCCCCchHHHHHHhhcCCCccEEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFE 262 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~v-i~~~~~~~~~~~~~~~~~~gg~dvvid 262 (371)
++++++|+|+ |.+|...++.+...|+ +|+.++++.++.+.+ ++.+...+ .|..+ ......+.+. .+++|++|+
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~-~~~~d~vi~ 83 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGD--DAAIRAALAA-AGAFDGLVN 83 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCC--HHHHHHHHHH-hCCCCEEEE
Confidence 4679999988 8999999999999999 789898887766544 34444322 23333 2221222221 237999999
Q ss_pred ccCC
Q 017431 263 CIGN 266 (371)
Q Consensus 263 ~~g~ 266 (371)
+.|.
T Consensus 84 ~ag~ 87 (245)
T PRK07060 84 CAGI 87 (245)
T ss_pred CCCC
Confidence 8874
|
|
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.025 Score=51.57 Aligned_cols=43 Identities=28% Similarity=0.363 Sum_probs=37.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 227 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~ 227 (371)
..+++|+|+|+|++|.+++..+...|+++|++++++.+|.+.+
T Consensus 125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~l 167 (284)
T PRK12549 125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAAL 167 (284)
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 3568999999999999999999999998999999998876644
|
|
| >cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2 | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.034 Score=48.80 Aligned_cols=93 Identities=18% Similarity=0.200 Sum_probs=62.0
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCC--eEEEEcCC----hhh--------HHHHHhcCCcEEecCCCCCchHHHHH
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGAS--RVIGIDID----PKK--------FDRAKNFGVTEFVNPKDHDKPIQQVL 249 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~--~v~~v~~~----~~~--------~~~~~~~g~~~vi~~~~~~~~~~~~~ 249 (371)
--++++|+|+|+|..|.+.+..+...|++ +++.++++ .++ .+++++++... . + .++.+.+
T Consensus 22 ~l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---~--~~l~~~l 95 (226)
T cd05311 22 KIEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---G--GTLKEAL 95 (226)
T ss_pred CccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---c--CCHHHHH
Confidence 35678999999999999999988899998 89999998 443 33445543211 0 1 1233333
Q ss_pred HhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEc
Q 017431 250 VDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 250 ~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g 288 (371)
. ++|+++++++..-.-...++.|.+. ..++.+.
T Consensus 96 ~-----~~dvlIgaT~~G~~~~~~l~~m~~~-~ivf~ls 128 (226)
T cd05311 96 K-----GADVFIGVSRPGVVKKEMIKKMAKD-PIVFALA 128 (226)
T ss_pred h-----cCCEEEeCCCCCCCCHHHHHhhCCC-CEEEEeC
Confidence 1 4899999997422224667777774 6665554
|
Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph |
| >PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.022 Score=43.66 Aligned_cols=91 Identities=26% Similarity=0.314 Sum_probs=60.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHH-HcCCCeEEEEcCChhhHHHHHhcC----C-cE-EecCCCCCchHHHHHHhhcCC-Cc
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAK-AAGASRVIGIDIDPKKFDRAKNFG----V-TE-FVNPKDHDKPIQQVLVDLTDG-GV 257 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~-~~g~~~v~~v~~~~~~~~~~~~~g----~-~~-vi~~~~~~~~~~~~~~~~~~g-g~ 257 (371)
|+++||-+|+| .|..++.+++ ..++ +|++++.+++..+.+++.- . +. .+...+ + . ...... +|
T Consensus 1 p~~~vLDlGcG-~G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d----~-~--~~~~~~~~~ 71 (112)
T PF12847_consen 1 PGGRVLDLGCG-TGRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQGD----A-E--FDPDFLEPF 71 (112)
T ss_dssp TTCEEEEETTT-TSHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESC----C-H--GGTTTSSCE
T ss_pred CCCEEEEEcCc-CCHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECc----c-c--cCcccCCCC
Confidence 68899999886 3777778887 4677 8999999998877776432 2 11 222222 2 0 112222 79
Q ss_pred cEEEEcc-CC---H------HHHHHHHHHhccCCceEEE
Q 017431 258 DYSFECI-GN---V------SVMRAALECCHKGWGTSVI 286 (371)
Q Consensus 258 dvvid~~-g~---~------~~~~~~~~~l~~~~G~iv~ 286 (371)
|+|+... .. . ..++.+.+.|+++ |+++.
T Consensus 72 D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi 109 (112)
T PF12847_consen 72 DLVICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVI 109 (112)
T ss_dssp EEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEE
T ss_pred CEEEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEE
Confidence 9999866 21 1 2378899999997 99875
|
... |
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.069 Score=52.97 Aligned_cols=46 Identities=17% Similarity=0.161 Sum_probs=38.8
Q ss_pred hcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHH
Q 017431 180 NTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR 226 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~ 226 (371)
...+.+.|++|||+|+ |.+|.+.++.+...|+ +|+++.++.++.+.
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~ 119 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAES 119 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHH
Confidence 4556778999999988 9999999999988999 88888888877653
|
|
| >PRK00811 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.021 Score=51.95 Aligned_cols=96 Identities=13% Similarity=0.134 Sum_probs=63.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC---------cEE-ecCCCCCchHHHHHHhhcCC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV---------TEF-VNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~---------~~v-i~~~~~~~~~~~~~~~~~~g 255 (371)
..++||++|+|. |..+..+++..+..+|++++.+++-.+.++++-. ..+ +.. .+....+.+ ..+
T Consensus 76 ~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~----~Da~~~l~~-~~~ 149 (283)
T PRK00811 76 NPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVI----GDGIKFVAE-TEN 149 (283)
T ss_pred CCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEE----CchHHHHhh-CCC
Confidence 457999998864 6667777777777799999999998888776321 111 111 222233333 334
Q ss_pred CccEEEEccCC----------HHHHHHHHHHhccCCceEEEEc
Q 017431 256 GVDYSFECIGN----------VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 256 g~dvvid~~g~----------~~~~~~~~~~l~~~~G~iv~~g 288 (371)
.+|+|+.-... .+.++.+.+.|+++ |.++...
T Consensus 150 ~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~~ 191 (283)
T PRK00811 150 SFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQS 191 (283)
T ss_pred cccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEeC
Confidence 89999853321 34467888999997 9988753
|
|
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.027 Score=50.90 Aligned_cols=95 Identities=17% Similarity=0.197 Sum_probs=65.8
Q ss_pred hccccchhhhhhhhhcCCCCCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCch
Q 017431 166 LLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGT-VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKP 244 (371)
Q Consensus 166 ~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~-vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~ 244 (371)
.+||+....+..+....---.|++|+|+|.|. +|.-+..++...|+ .|+.+.+.. .+
T Consensus 137 ~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t---------------------~~ 194 (286)
T PRK14175 137 FVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRS---------------------KD 194 (286)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc---------------------hh
Confidence 45555554444443333245799999999965 99999999999999 787775431 11
Q ss_pred HHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 245 IQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 245 ~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+.+.++ .+|++|.++|.++.+.. +.++++ ..+|.+|..
T Consensus 195 l~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~ 232 (286)
T PRK14175 195 MASYLK-----DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNT 232 (286)
T ss_pred HHHHHh-----hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCC
Confidence 222222 49999999999876555 458886 888888874
|
|
| >PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.024 Score=49.05 Aligned_cols=100 Identities=21% Similarity=0.195 Sum_probs=65.8
Q ss_pred hhcCCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHH----hcCCc---EEecCCCCCchHHHHHH
Q 017431 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAK----NFGVT---EFVNPKDHDKPIQQVLV 250 (371)
Q Consensus 179 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~v~~v~~~~~~~~~~~----~~g~~---~vi~~~~~~~~~~~~~~ 250 (371)
.....++++++||=+|+| .|..+..+++..+ ..+|++++.+++-.+.++ +.+.. .++. .+ ..+.+.
T Consensus 65 ~~~l~~~~~~~VLDiG~G-sG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~-~d----~~~~~~ 138 (205)
T PRK13944 65 CELIEPRPGMKILEVGTG-SGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYH-GD----GKRGLE 138 (205)
T ss_pred HHhcCCCCCCEEEEECcC-ccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEE-CC----cccCCc
Confidence 455677899999999886 4667777777765 238999999987655544 34432 2222 11 111110
Q ss_pred hhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEE
Q 017431 251 DLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 251 ~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
..+.||+|+-+.......+.+++.|+++ |+++..
T Consensus 139 --~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~ 172 (205)
T PRK13944 139 --KHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP 172 (205)
T ss_pred --cCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence 1237999997766556678888999997 998764
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.058 Score=47.73 Aligned_cols=79 Identities=24% Similarity=0.198 Sum_probs=49.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcE-E--ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~~~~~~~--g 255 (371)
+++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+ ++.+... + .|..+ .......+.+... +
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 83 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLAD-PASVQRFFDAAAAALG 83 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4789999988 9999999998888999 788888877654432 2233222 2 23332 1122222222211 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|++++++|.
T Consensus 84 ~id~vi~~ag~ 94 (250)
T PRK12939 84 GLDGLVNNAGI 94 (250)
T ss_pred CCCEEEECCCC
Confidence 79999999875
|
|
| >PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.025 Score=55.75 Aligned_cols=73 Identities=29% Similarity=0.315 Sum_probs=53.8
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
+.++++|+|+|.|..|++++++++..|+ +|++.+..+++.+.++++|+.. +.... ..+.+ ..+|+|+.+
T Consensus 9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~-~~~~~----~~~~l-----~~~D~VV~S 77 (488)
T PRK03369 9 LLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVAT-VSTSD----AVQQI-----ADYALVVTS 77 (488)
T ss_pred ccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEE-EcCcc----hHhHh-----hcCCEEEEC
Confidence 4578999999999999999999999999 8999987766666667778743 22111 11112 147999998
Q ss_pred cCCH
Q 017431 264 IGNV 267 (371)
Q Consensus 264 ~g~~ 267 (371)
.|-+
T Consensus 78 pGi~ 81 (488)
T PRK03369 78 PGFR 81 (488)
T ss_pred CCCC
Confidence 8864
|
|
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.17 Score=43.75 Aligned_cols=93 Identities=22% Similarity=0.175 Sum_probs=60.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-hHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~-~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
.|++|||+|+|.+|..-++.+...|+ +|++++.... ..+.+.+.|--..+ ..++.. . .+ .++++||-++
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~-~~~~~~----~--dl--~~~~lVi~at 77 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWL-ARCFDA----D--IL--EGAFLVIAAT 77 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEE-eCCCCH----H--Hh--CCcEEEEECC
Confidence 46899999999999999999999999 8888865433 22223333321222 222111 1 11 2699999999
Q ss_pred CCHHHHHHHHHHhccCCceEEEEcc
Q 017431 265 GNVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 265 g~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
+.+..-.......... |.+|...+
T Consensus 78 ~d~~ln~~i~~~a~~~-~ilvn~~d 101 (205)
T TIGR01470 78 DDEELNRRVAHAARAR-GVPVNVVD 101 (205)
T ss_pred CCHHHHHHHHHHHHHc-CCEEEECC
Confidence 9976556666666664 88776544
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.066 Score=47.35 Aligned_cols=79 Identities=24% Similarity=0.307 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCcEE---ecCCCCCchHHHHHHhhc--CCCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~g~~~v---i~~~~~~~~~~~~~~~~~--~gg~d 258 (371)
+++++||+|+ |.+|.+.++.+...|+ +|+++++++++.+ ..++++.... .|..+ ..+....+.... .+++|
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 82 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGD-VAAQKALAQALAEAFGRLD 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4679999988 9999999999999999 8999988776544 3345554321 22222 112222222221 13799
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
+++++.|.
T Consensus 83 ~vi~~ag~ 90 (249)
T PRK06500 83 AVFINAGV 90 (249)
T ss_pred EEEECCCC
Confidence 99998874
|
|
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.012 Score=53.20 Aligned_cols=74 Identities=24% Similarity=0.269 Sum_probs=51.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCcEE-ecCCCCCchHHHHHHhhcCC-CccEEE
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEF-VNPKDHDKPIQQVLVDLTDG-GVDYSF 261 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~v-i~~~~~~~~~~~~~~~~~~g-g~dvvi 261 (371)
.+++++||+|||+.+.+++.-+...|+.+++++.|+.+|.+.+. .++.... +.... ....... .+|+++
T Consensus 124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~--------~~~~~~~~~~dliI 195 (283)
T COG0169 124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAA--------LADLEGLEEADLLI 195 (283)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccc--------ccccccccccCEEE
Confidence 35799999999999999999999999889999999888866554 3432110 00000 0111111 489999
Q ss_pred EccCC
Q 017431 262 ECIGN 266 (371)
Q Consensus 262 d~~g~ 266 (371)
|+++-
T Consensus 196 NaTp~ 200 (283)
T COG0169 196 NATPV 200 (283)
T ss_pred ECCCC
Confidence 98875
|
|
| >PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.016 Score=52.76 Aligned_cols=96 Identities=29% Similarity=0.442 Sum_probs=56.8
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCcE-EecCCCCCchHHHHHHhhcCCCcc
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE-FVNPKDHDKPIQQVLVDLTDGGVD 258 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~~-vi~~~~~~~~~~~~~~~~~~gg~d 258 (371)
..+|++||=+|+| .|++++..++ +|+++|++++.++...+.+++ .|... +..... . +...+.||
T Consensus 159 ~~~g~~vLDvG~G-SGILaiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~--~-------~~~~~~~d 227 (295)
T PF06325_consen 159 VKPGKRVLDVGCG-SGILAIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLS--E-------DLVEGKFD 227 (295)
T ss_dssp SSTTSEEEEES-T-TSHHHHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCT--S-------CTCCS-EE
T ss_pred ccCCCEEEEeCCc-HHHHHHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEe--c-------ccccccCC
Confidence 5778899888774 3444444444 599899999999976555543 33321 111111 0 11124799
Q ss_pred EEEEccCCHH---HHHHHHHHhccCCceEEEEccCC
Q 017431 259 YSFECIGNVS---VMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 259 vvid~~g~~~---~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
+|+-..-... ......+.++++ |.++.-|...
T Consensus 228 lvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGIl~ 262 (295)
T PF06325_consen 228 LVVANILADVLLELAPDIASLLKPG-GYLILSGILE 262 (295)
T ss_dssp EEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEEEG
T ss_pred EEEECCCHHHHHHHHHHHHHhhCCC-CEEEEccccH
Confidence 9996555432 345556678896 9999888754
|
Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A .... |
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.023 Score=53.82 Aligned_cols=95 Identities=17% Similarity=0.149 Sum_probs=64.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
-++++|||+|||-+|..++..+...|+.+|+.+.+..+|.+ +++++|+. ++..++ ....+. .+|+||.+
T Consensus 176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~e----l~~~l~-----~~DvViss 245 (414)
T COG0373 176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALEE----LLEALA-----EADVVISS 245 (414)
T ss_pred cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHHH----HHHhhh-----hCCEEEEe
Confidence 57889999999999999999999999889999988888765 67789853 222221 112221 59999999
Q ss_pred cCCHHH---HHHHHHHhccCCc-eEEEEcc
Q 017431 264 IGNVSV---MRAALECCHKGWG-TSVIVGV 289 (371)
Q Consensus 264 ~g~~~~---~~~~~~~l~~~~G-~iv~~g~ 289 (371)
++.++- -......+..... -+++++.
T Consensus 246 Tsa~~~ii~~~~ve~a~~~r~~~livDiav 275 (414)
T COG0373 246 TSAPHPIITREMVERALKIRKRLLIVDIAV 275 (414)
T ss_pred cCCCccccCHHHHHHHHhcccCeEEEEecC
Confidence 988542 2333344443213 3455544
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.043 Score=47.33 Aligned_cols=35 Identities=29% Similarity=0.346 Sum_probs=31.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 220 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~ 220 (371)
.+.+|+|+|+|++|...++.+..+|.++++.++.+
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 45789999999999999999999999899999876
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.083 Score=47.18 Aligned_cols=77 Identities=23% Similarity=0.259 Sum_probs=50.4
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcC-Cc-E--EecCCCCCchHHHHHHhhc---CCCcc
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFG-VT-E--FVNPKDHDKPIQQVLVDLT---DGGVD 258 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g-~~-~--vi~~~~~~~~~~~~~~~~~---~gg~d 258 (371)
+++||+|+ |.+|.+.++.+...|+ +|++++++.++.+.+. .++ .. + ..|..+ .....+.+.+.. .+++|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTD-RAAWDAALADFAAATGGRLD 79 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCC
Confidence 57999988 9999999998888899 8999888887665443 332 11 1 233333 122333333221 34799
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
++++++|.
T Consensus 80 ~vi~~ag~ 87 (260)
T PRK08267 80 VLFNNAGI 87 (260)
T ss_pred EEEECCCC
Confidence 99998875
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.025 Score=50.32 Aligned_cols=79 Identities=23% Similarity=0.272 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE--E--ecCCCCCchHHHHHHhhcC--CCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--F--VNPKDHDKPIQQVLVDLTD--GGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~--v--i~~~~~~~~~~~~~~~~~~--gg~d 258 (371)
+++++||+|+ |.+|...++.+...|+ +|+.++++++..+...++.... . .|..+ .......+.+... +++|
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~~d 91 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSD-SQSVEAAVAAVISAFGRID 91 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4689999988 9999998888888999 8999988877655554443211 1 23222 1222222222221 3699
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
+++++.|.
T Consensus 92 ~vi~~ag~ 99 (255)
T PRK06841 92 ILVNSAGV 99 (255)
T ss_pred EEEECCCC
Confidence 99998874
|
|
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.16 Score=43.79 Aligned_cols=91 Identities=13% Similarity=0.058 Sum_probs=56.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-h-HHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-K-FDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~-~-~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
.|++|||+|+|.+|...+..+...|+ +|++++.... . .+++.+ +. ..+.... +.+. .+ .++|+||-+
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~-~~-i~~~~~~----~~~~--~l--~~adlViaa 77 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEE-GK-IRWKQKE----FEPS--DI--VDAFLVIAA 77 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhC-CC-EEEEecC----CChh--hc--CCceEEEEc
Confidence 57899999999999999988888998 7888865432 1 222222 21 1111111 1110 01 269999999
Q ss_pred cCCHHHHHHHHHHhccCCceEEEEcc
Q 017431 264 IGNVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 264 ~g~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
++.++ ++..+...... +.++...+
T Consensus 78 T~d~e-lN~~i~~~a~~-~~lvn~~d 101 (202)
T PRK06718 78 TNDPR-VNEQVKEDLPE-NALFNVIT 101 (202)
T ss_pred CCCHH-HHHHHHHHHHh-CCcEEECC
Confidence 99977 55555545554 66666644
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.061 Score=49.38 Aligned_cols=102 Identities=19% Similarity=0.196 Sum_probs=61.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh------HHHHHhcCCcEE---ecCCCCCchHHHHHHhhc--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK------FDRAKNFGVTEF---VNPKDHDKPIQQVLVDLT-- 253 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~------~~~~~~~g~~~v---i~~~~~~~~~~~~~~~~~-- 253 (371)
.++++||+|+ |++|.+.+..+...|+ +|+.+.++.+. .+.+++.+.... .|..+ .....+.+.+..
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~ 131 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKD-EAFCRQLVERAVKE 131 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHHHHHH
Confidence 4789999988 9999998888888899 77776554321 123334443322 22222 122222232222
Q ss_pred CCCccEEEEccCCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 254 DGGVDYSFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 254 ~gg~dvvid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
-+++|+++++.|.. .+++.++..|..+ |++|.+++.
T Consensus 132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~iv~~sS~ 193 (300)
T PRK06128 132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPG-ASIINTGSI 193 (300)
T ss_pred hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcC-CEEEEECCc
Confidence 13799999988731 1234455556675 899888664
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.013 Score=57.16 Aligned_cols=94 Identities=15% Similarity=0.126 Sum_probs=61.2
Q ss_pred hcCCCCCCCEEE----EEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCc-EEecCCCCCchHHHHHHhhc
Q 017431 180 NTAKVEPGSIVA----VFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 180 ~~~~~~~g~~Vl----I~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~~~~~~~ 253 (371)
...++++|+.+| |+|+ |++|.+++|+++..|+ .|+++.+.+.+....+..+.+ .+++... ..+.+.+....
T Consensus 27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~l~~~~ 103 (450)
T PRK08261 27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATG--ITDPADLKALY 103 (450)
T ss_pred cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCC--CCCHHHHHHHH
Confidence 456778888888 7765 9999999999999999 888876655533333333333 2444433 22223332221
Q ss_pred CCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCC
Q 017431 254 DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 254 ~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
..+...++.|.++ |+++.++...
T Consensus 104 --------------~~~~~~l~~l~~~-griv~i~s~~ 126 (450)
T PRK08261 104 --------------EFFHPVLRSLAPC-GRVVVLGRPP 126 (450)
T ss_pred --------------HHHHHHHHhccCC-CEEEEEcccc
Confidence 3466777888886 8999887643
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.041 Score=47.99 Aligned_cols=77 Identities=18% Similarity=0.254 Sum_probs=51.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE-EecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
+++||+|+ |.+|...++.+...|+ +|+.+++++++.+.++..+... ..|..+ .......+.+...+++|+++.+.|
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~d~vi~~ag 79 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVAD-PASVAGLAWKLDGEALDAAVYVAG 79 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCC-HHHHHHHHHHhcCCCCCEEEECCC
Confidence 47899987 9999998887778899 7888988887766666555432 233333 122333222332237999999876
Q ss_pred C
Q 017431 266 N 266 (371)
Q Consensus 266 ~ 266 (371)
.
T Consensus 80 ~ 80 (222)
T PRK06953 80 V 80 (222)
T ss_pred c
Confidence 5
|
|
| >COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.019 Score=51.60 Aligned_cols=97 Identities=20% Similarity=0.185 Sum_probs=69.4
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE-ecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
..+|.|+|.|.+|.-|..+|.-+|+ +|+..+.+.+|++.+..+-...+ ..+.. ..++.+.+. ++|++|.++=
T Consensus 168 ~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st-~~~iee~v~-----~aDlvIgaVL 240 (371)
T COG0686 168 PAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYST-PSNIEEAVK-----KADLVIGAVL 240 (371)
T ss_pred CccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcC-HHHHHHHhh-----hccEEEEEEE
Confidence 3467788999999999999999999 99999999999988876433332 22222 133333332 5899987532
Q ss_pred C-----H-HHHHHHHHHhccCCceEEEEccCC
Q 017431 266 N-----V-SVMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 266 ~-----~-~~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
- | -..++..+.|.++ +.+|++....
T Consensus 241 IpgakaPkLvt~e~vk~MkpG-sVivDVAiDq 271 (371)
T COG0686 241 IPGAKAPKLVTREMVKQMKPG-SVIVDVAIDQ 271 (371)
T ss_pred ecCCCCceehhHHHHHhcCCC-cEEEEEEEcC
Confidence 1 1 2367889999997 9999997643
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.027 Score=50.22 Aligned_cols=80 Identities=19% Similarity=0.263 Sum_probs=51.9
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h---cCC-cEE--ecCCCCCchHHHHHHhhc--C
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N---FGV-TEF--VNPKDHDKPIQQVLVDLT--D 254 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~---~g~-~~v--i~~~~~~~~~~~~~~~~~--~ 254 (371)
..+++|||+|+ |.+|.+.+..+...|+ +|+++.+++++.+.+. + .+. ..+ .|..+ ..+..+.+.+.. .
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 84 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTD-YQSIKAAVAHAETEA 84 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHhc
Confidence 35789999988 9999999999999999 8999988887654332 2 121 112 23322 123333333321 2
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+.+|+++++.|.
T Consensus 85 ~~~d~li~~ag~ 96 (258)
T PRK06949 85 GTIDILVNNSGV 96 (258)
T ss_pred CCCCEEEECCCC
Confidence 378999998883
|
|
| >PRK12550 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.032 Score=50.35 Aligned_cols=70 Identities=21% Similarity=0.177 Sum_probs=50.2
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEEecCCCCCchHHHHHHhhcCCCccEEE
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSF 261 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvi 261 (371)
+...+++++|+|+|+.+.+++.-+..+|+.+|+++.++.++.+.+ +.++.. +...+ ....+|+++
T Consensus 118 ~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~-----------~~~~~---~~~~~dlvI 183 (272)
T PRK12550 118 QVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE-----------WRPDL---GGIEADILV 183 (272)
T ss_pred CCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc-----------chhhc---ccccCCEEE
Confidence 344567999999999999999999999998899999998876644 344321 10111 112589999
Q ss_pred EccCC
Q 017431 262 ECIGN 266 (371)
Q Consensus 262 d~~g~ 266 (371)
+|++-
T Consensus 184 NaTp~ 188 (272)
T PRK12550 184 NVTPI 188 (272)
T ss_pred ECCcc
Confidence 99863
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.034 Score=49.84 Aligned_cols=82 Identities=22% Similarity=0.336 Sum_probs=52.4
Q ss_pred CCCCCCEEEEEcC-C-hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----h-cCCcEE----ecCCCCCchHHHHHHh
Q 017431 183 KVEPGSIVAVFGL-G-TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----N-FGVTEF----VNPKDHDKPIQQVLVD 251 (371)
Q Consensus 183 ~~~~g~~VlI~Ga-g-~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~-~g~~~v----i~~~~~~~~~~~~~~~ 251 (371)
.+.+++++||+|+ | ++|.+.++.+...|+ +|+++++++++.+... + ++...+ .|..+ .......+.+
T Consensus 13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~ 90 (262)
T PRK07831 13 GLLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS-EAQVDALIDA 90 (262)
T ss_pred cccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC-HHHHHHHHHH
Confidence 3445789999987 6 799999999999999 7888888776554332 1 443222 23322 1223333332
Q ss_pred hc--CCCccEEEEccCC
Q 017431 252 LT--DGGVDYSFECIGN 266 (371)
Q Consensus 252 ~~--~gg~dvvid~~g~ 266 (371)
.. .+++|+++++.|.
T Consensus 91 ~~~~~g~id~li~~ag~ 107 (262)
T PRK07831 91 AVERLGRLDVLVNNAGL 107 (262)
T ss_pred HHHHcCCCCEEEECCCC
Confidence 21 1379999999984
|
|
| >PRK00536 speE spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.023 Score=50.77 Aligned_cols=98 Identities=15% Similarity=-0.026 Sum_probs=65.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE--EecCCCCCchHHHHHHhhcCCCccEEE-E
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--FVNPKDHDKPIQQVLVDLTDGGVDYSF-E 262 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~--vi~~~~~~~~~~~~~~~~~~gg~dvvi-d 262 (371)
..++|||+|+|- |.++-.++|+- ++|+.++.+++-.++++++-... .++... ......+.+...+.||+|| |
T Consensus 72 ~pk~VLIiGGGD-Gg~~REvLkh~--~~v~mVeID~~Vv~~~k~~lP~~~~~~~DpR--v~l~~~~~~~~~~~fDVIIvD 146 (262)
T PRK00536 72 ELKEVLIVDGFD-LELAHQLFKYD--THVDFVQADEKILDSFISFFPHFHEVKNNKN--FTHAKQLLDLDIKKYDLIICL 146 (262)
T ss_pred CCCeEEEEcCCc-hHHHHHHHCcC--CeeEEEECCHHHHHHHHHHCHHHHHhhcCCC--EEEeehhhhccCCcCCEEEEc
Confidence 348999997753 55566888875 39999999999888888743211 111111 1111123333334799877 7
Q ss_pred ccCCHHHHHHHHHHhccCCceEEEEcc
Q 017431 263 CIGNVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 263 ~~g~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
++-.++..+.+.++|+++ |.+|.-+.
T Consensus 147 s~~~~~fy~~~~~~L~~~-Gi~v~Qs~ 172 (262)
T PRK00536 147 QEPDIHKIDGLKRMLKED-GVFISVAK 172 (262)
T ss_pred CCCChHHHHHHHHhcCCC-cEEEECCC
Confidence 677778889999999997 99987654
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.023 Score=50.79 Aligned_cols=82 Identities=26% Similarity=0.268 Sum_probs=52.5
Q ss_pred CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCc--E--EecCCCCCchHHHHHHhhc--C
Q 017431 183 KVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVT--E--FVNPKDHDKPIQQVLVDLT--D 254 (371)
Q Consensus 183 ~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~-~g~~--~--vi~~~~~~~~~~~~~~~~~--~ 254 (371)
..-++.++||+|+ |.+|...+..+...|+ +|+.+.++++..+.+.+ ..-. . ..|..+ .....+.+.+.. -
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 84 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVAD-PAQVERVFDTAVERF 84 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCC-HHHHHHHHHHHHHHh
Confidence 3457789999988 9999999999999999 79999888765554433 2211 1 123322 122222222221 1
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|+++++.|.
T Consensus 85 ~~~d~vi~~ag~ 96 (264)
T PRK12829 85 GGLDVLVNNAGI 96 (264)
T ss_pred CCCCEEEECCCC
Confidence 379999998875
|
|
| >PLN02366 spermidine synthase | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.042 Score=50.50 Aligned_cols=102 Identities=17% Similarity=0.099 Sum_probs=64.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE--EecCCCC---CchHHHHHHhhcCCCccE
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--FVNPKDH---DKPIQQVLVDLTDGGVDY 259 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~--vi~~~~~---~~~~~~~~~~~~~gg~dv 259 (371)
...++|||+|+|. |.++..++++-+..+|++++.+++-.++++++-... .++.... ..+....+++..++.+|+
T Consensus 90 ~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yDv 168 (308)
T PLN02366 90 PNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYDA 168 (308)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCCE
Confidence 4568999998865 556678888877779999999998777777632110 0000000 022223344332347998
Q ss_pred EEEccCC----------HHHHHHHHHHhccCCceEEEEc
Q 017431 260 SFECIGN----------VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 260 vid~~g~----------~~~~~~~~~~l~~~~G~iv~~g 288 (371)
||.-... .+.++.+.++|+++ |.++..+
T Consensus 169 Ii~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~ 206 (308)
T PLN02366 169 IIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQA 206 (308)
T ss_pred EEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECc
Confidence 8853322 24688999999997 9997653
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.028 Score=50.41 Aligned_cols=79 Identities=18% Similarity=0.246 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh---cCCc-EE--ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN---FGVT-EF--VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~---~g~~-~v--i~~~~~~~~~~~~~~~~~~--g 255 (371)
+++++||+|+ |.+|.+.++.+...|+ +|+++++++++.+.+ ++ .+.. .+ .|..+ .....+.+.+... +
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 86 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH-PEATAGLAGQAVEAFG 86 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 5789999988 8999999999888999 899998887665433 22 2322 12 23332 1222222222211 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|++++++|.
T Consensus 87 ~id~vi~~Ag~ 97 (263)
T PRK07814 87 RLDIVVNNVGG 97 (263)
T ss_pred CCCEEEECCCC
Confidence 79999998873
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.03 Score=50.24 Aligned_cols=78 Identities=21% Similarity=0.242 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCcE-E--ecCCCCCchHHHHHHhhcC--CCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTE-F--VNPKDHDKPIQQVLVDLTD--GGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~-~g~~~-v--i~~~~~~~~~~~~~~~~~~--gg~d 258 (371)
+++++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.+ .+... . .|..+ .....+.+.+... +.+|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id 81 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS-LDDHKEAVARCVAAFGKID 81 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCC-HHHHHHHHHHHHHHhCCCC
Confidence 4789999988 8999999988888999 89998888776555443 33211 1 22222 1223333333222 3689
Q ss_pred EEEEccC
Q 017431 259 YSFECIG 265 (371)
Q Consensus 259 vvid~~g 265 (371)
+++++.|
T Consensus 82 ~li~~Ag 88 (262)
T TIGR03325 82 CLIPNAG 88 (262)
T ss_pred EEEECCC
Confidence 9999876
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.1 Score=45.93 Aligned_cols=79 Identities=20% Similarity=0.287 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~~--g 255 (371)
++++|||+|+ |.+|...+..+...|+ .|+++.+++++.+.+ ++.+.... .|..+ ...+.+.+.+... +
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 81 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD-EAAVRALIEAAVEAFG 81 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 3578999988 9999999999888999 689998887764432 22343222 23322 1223333333222 2
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
.+|.+++++|.
T Consensus 82 ~id~vi~~ag~ 92 (246)
T PRK05653 82 ALDILVNNAGI 92 (246)
T ss_pred CCCEEEECCCc
Confidence 68999998865
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.036 Score=49.98 Aligned_cols=78 Identities=28% Similarity=0.347 Sum_probs=51.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcC-CcE-EecCCCCCchHHHHHHhhcC--CCccEE
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFG-VTE-FVNPKDHDKPIQQVLVDLTD--GGVDYS 260 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g-~~~-vi~~~~~~~~~~~~~~~~~~--gg~dvv 260 (371)
+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++++ ... ..|..+ ...+.+.+.+... +++|++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~l 82 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTD-PASFAAFLDAVEADLGPIDVL 82 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 578999988 9999999988888899 788888888776543 3444 211 123333 1233333333222 479999
Q ss_pred EEccCC
Q 017431 261 FECIGN 266 (371)
Q Consensus 261 id~~g~ 266 (371)
+++.|.
T Consensus 83 i~~ag~ 88 (273)
T PRK07825 83 VNNAGV 88 (273)
T ss_pred EECCCc
Confidence 998874
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.034 Score=49.87 Aligned_cols=78 Identities=22% Similarity=0.245 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCcE-E--ecCCCCCchHHHHHHhhc--CCCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTE-F--VNPKDHDKPIQQVLVDLT--DGGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~-v--i~~~~~~~~~~~~~~~~~--~gg~d 258 (371)
+++++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +++... . .|..+ .......+.+.. .+.+|
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id 82 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTS-YADNQRAVDQTVDAFGKLD 82 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCC-HHHHHHHHHHHHHhcCCCC
Confidence 5789999988 8999999998889999 8998988887765544 343211 1 22222 122333333322 23799
Q ss_pred EEEEccC
Q 017431 259 YSFECIG 265 (371)
Q Consensus 259 vvid~~g 265 (371)
+++++.|
T Consensus 83 ~li~~ag 89 (263)
T PRK06200 83 CFVGNAG 89 (263)
T ss_pred EEEECCC
Confidence 9999887
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.078 Score=52.73 Aligned_cols=103 Identities=26% Similarity=0.364 Sum_probs=67.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCcE---EecCCCCCchHHHHHHhhcC--CCc
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTE---FVNPKDHDKPIQQVLVDLTD--GGV 257 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~---vi~~~~~~~~~~~~~~~~~~--gg~ 257 (371)
..|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +++... ..|..+ .......+.+... +.+
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITD-EAAVESAFAQIQARWGRL 344 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCC-HHHHHHHHHHHHHHcCCC
Confidence 46789999988 9999999988888999 8999988887765444 354432 123333 1223333333222 369
Q ss_pred cEEEEccCCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 258 DYSFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 258 dvvid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
|++++++|.. .+.+.++..|..+ |++|.+++.
T Consensus 345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~iv~isS~ 402 (520)
T PRK06484 345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQG-GVIVNLGSI 402 (520)
T ss_pred CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccC-CEEEEECch
Confidence 9999988741 1244455666665 999988764
|
|
| >TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.016 Score=50.46 Aligned_cols=101 Identities=22% Similarity=0.274 Sum_probs=65.0
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHH----hcCCcEE-ecCCCCCchHHHHHHh
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAK----NFGVTEF-VNPKDHDKPIQQVLVD 251 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~v~~v~~~~~~~~~~~----~~g~~~v-i~~~~~~~~~~~~~~~ 251 (371)
+.....++++++||-+|+| .|..++.+++..+. .+|++++.+++..+.++ ++|.+.+ +...+ ..+ .
T Consensus 69 ~~~~l~~~~~~~VLDiG~G-sG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d----~~~---~ 140 (215)
T TIGR00080 69 MTELLELKPGMKVLEIGTG-SGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGD----GTQ---G 140 (215)
T ss_pred HHHHhCCCCcCEEEEECCC-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECC----ccc---C
Confidence 3455678899999999886 46666677777653 36999999988666554 3454322 11111 100 1
Q ss_pred hc-CCCccEEEEccCCHHHHHHHHHHhccCCceEEEE
Q 017431 252 LT-DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 252 ~~-~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
.. .+.||+|+-....+.......+.|+++ |+++..
T Consensus 141 ~~~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~ 176 (215)
T TIGR00080 141 WEPLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP 176 (215)
T ss_pred CcccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence 11 137998886555556677888999997 998764
|
Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt. |
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.059 Score=48.98 Aligned_cols=43 Identities=26% Similarity=0.264 Sum_probs=36.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 227 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~ 227 (371)
.+++++||+|+|+.+.+++.-+...|+.+++++.++.+|.+.+
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~L 167 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQAL 167 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHH
Confidence 3578999999999999998888889998999999988776544
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.068 Score=47.82 Aligned_cols=74 Identities=22% Similarity=0.304 Sum_probs=47.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE-EecCCCCCchHHHHHHhhcC--CCccEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTD--GGVDYSF 261 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~~~~~~~~--gg~dvvi 261 (371)
+|+++||+|+ +++|.+.+..+...|+ +|+.+++++++.. .... ..|..+ .....+.+.+... +.+|+++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~-~~~i~~~~~~~~~~~~~id~li 77 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSN-KEQVIKGIDYVISKYGRIDILV 77 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 4689999988 8999999999999999 8888877665321 1111 123333 1233333333222 3699999
Q ss_pred EccCC
Q 017431 262 ECIGN 266 (371)
Q Consensus 262 d~~g~ 266 (371)
++.|.
T Consensus 78 ~~Ag~ 82 (258)
T PRK06398 78 NNAGI 82 (258)
T ss_pred ECCCC
Confidence 98773
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.1 Score=47.09 Aligned_cols=76 Identities=22% Similarity=0.278 Sum_probs=47.7
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcE----EecCCCCCchHHHHHHhhc--CCCc
Q 017431 189 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE----FVNPKDHDKPIQQVLVDLT--DGGV 257 (371)
Q Consensus 189 ~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~----vi~~~~~~~~~~~~~~~~~--~gg~ 257 (371)
++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ +..+... ..|..+ .....+.+.+.. .+++
T Consensus 2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~i 79 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISD-YDAVAAFAADIHAAHGSM 79 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC-HHHHHHHHHHHHHhcCCC
Confidence 6899988 9999999998888999 788888877654332 2233321 133333 122222222221 1369
Q ss_pred cEEEEccCC
Q 017431 258 DYSFECIGN 266 (371)
Q Consensus 258 dvvid~~g~ 266 (371)
|+++++.|.
T Consensus 80 d~lv~~ag~ 88 (272)
T PRK07832 80 DVVMNIAGI 88 (272)
T ss_pred CEEEECCCC
Confidence 999998874
|
|
| >PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.025 Score=48.11 Aligned_cols=97 Identities=16% Similarity=0.143 Sum_probs=60.4
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcEEecCCCCCchHHHHHHhhcCCCccE
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDY 259 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dv 259 (371)
+.++.+||-+|+| .|..++.+++.....+|++++.+++..+.++ +.+...+ .... .+..+ +.. .+.||+
T Consensus 43 l~~g~~VLDiGcG-tG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i-~~~~--~d~~~-~~~--~~~fDl 115 (187)
T PRK00107 43 LPGGERVLDVGSG-AGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNV-TVVH--GRAEE-FGQ--EEKFDV 115 (187)
T ss_pred cCCCCeEEEEcCC-CCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCE-EEEe--ccHhh-CCC--CCCccE
Confidence 4458899988875 3555566665554339999999988666554 3454321 1111 11111 111 237999
Q ss_pred EEEccC-C-HHHHHHHHHHhccCCceEEEEc
Q 017431 260 SFECIG-N-VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 260 vid~~g-~-~~~~~~~~~~l~~~~G~iv~~g 288 (371)
|+.... . +..++.+.+.|+++ |+++.+-
T Consensus 116 V~~~~~~~~~~~l~~~~~~LkpG-G~lv~~~ 145 (187)
T PRK00107 116 VTSRAVASLSDLVELCLPLLKPG-GRFLALK 145 (187)
T ss_pred EEEccccCHHHHHHHHHHhcCCC-eEEEEEe
Confidence 996322 2 35678899999997 9998773
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.044 Score=48.56 Aligned_cols=79 Identities=20% Similarity=0.306 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHhcCCcE-E--ecCCCCCchHHHHHHhhcC--CCc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFGVTE-F--VNPKDHDKPIQQVLVDLTD--GGV 257 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~--~~~~~~~~g~~~-v--i~~~~~~~~~~~~~~~~~~--gg~ 257 (371)
.++++||+|+ |.+|.+.+..+...|+ +|+.+++++. ..+.+++++... . .|..+ .......+.+... +++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~ 81 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSD-IEAIKALVDSAVEEFGHI 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHcCCC
Confidence 5789999988 8999999888888999 8888877652 123334444321 1 23332 1233333333222 369
Q ss_pred cEEEEccCC
Q 017431 258 DYSFECIGN 266 (371)
Q Consensus 258 dvvid~~g~ 266 (371)
|+++++.|.
T Consensus 82 d~li~~ag~ 90 (248)
T TIGR01832 82 DILVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999998864
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.12 Score=45.94 Aligned_cols=78 Identities=22% Similarity=0.420 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc----CCcE----EecCCCCCchHHHHHHhhcC-
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF----GVTE----FVNPKDHDKPIQQVLVDLTD- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~----g~~~----vi~~~~~~~~~~~~~~~~~~- 254 (371)
++++|||+|+ |.+|.+.+..+...|+ +|+.+.+++++.+.+ +++ +... ..|..+ .....+.+.+...
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~ 80 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD-QESLEEFLSKSAEK 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC-HHHHHHHHHHHHHH
Confidence 5789999988 8999999988888999 788888877664422 222 2211 123333 1223333333222
Q ss_pred -CCccEEEEccC
Q 017431 255 -GGVDYSFECIG 265 (371)
Q Consensus 255 -gg~dvvid~~g 265 (371)
+++|+++++.+
T Consensus 81 ~~~id~vi~~A~ 92 (256)
T PRK09186 81 YGKIDGAVNCAY 92 (256)
T ss_pred cCCccEEEECCc
Confidence 36899999875
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.044 Score=48.83 Aligned_cols=73 Identities=16% Similarity=0.130 Sum_probs=48.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcE-E--ecCCCCCchHHHHHHhhcCCCcc
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-F--VNPKDHDKPIQQVLVDLTDGGVD 258 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~-v--i~~~~~~~~~~~~~~~~~~gg~d 258 (371)
+++|||+|+ |.+|...++.+...|+ +|+++.+++++.+.+. +.+... + .|..+ . +.+.+...+++|
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~---~~~~~~~~~~id 75 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD--A---IDRAQAAEWDVD 75 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCC--H---HHHHHHhcCCCC
Confidence 468999988 9999999999999999 8888888776544332 233221 1 23322 1 223333334799
Q ss_pred EEEEccC
Q 017431 259 YSFECIG 265 (371)
Q Consensus 259 vvid~~g 265 (371)
++|++.|
T Consensus 76 ~vi~~ag 82 (257)
T PRK09291 76 VLLNNAG 82 (257)
T ss_pred EEEECCC
Confidence 9999887
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.19 Score=44.39 Aligned_cols=75 Identities=16% Similarity=0.101 Sum_probs=46.7
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC-cE--EecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV-TE--FVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~-~~--vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
.++||+|+ |++|...+..+...|+ +|+++++++++.+.+.+.+. .. ..|..+ ..+..+.+.+. ....|.++.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~-~~~~d~~i~~ 78 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFDVTD-HPGTKAALSQL-PFIPELWIFN 78 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEeeCCC-HHHHHHHHHhc-ccCCCEEEEc
Confidence 57899988 9999998888878899 89999998887765544321 11 123333 12333333332 2245766655
Q ss_pred cC
Q 017431 264 IG 265 (371)
Q Consensus 264 ~g 265 (371)
.|
T Consensus 79 ag 80 (240)
T PRK06101 79 AG 80 (240)
T ss_pred Cc
Confidence 54
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.038 Score=51.31 Aligned_cols=79 Identities=18% Similarity=0.236 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h----cCCcE----EecCCCCCchHHHHHHhhcCC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N----FGVTE----FVNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~----~g~~~----vi~~~~~~~~~~~~~~~~~~g 255 (371)
.|+++||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+. + .+... ..|..+...+..+.+.+..++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~ 130 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG 130 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence 5899999998 8999998887777899 8999999888765432 2 22111 223322112333344444444
Q ss_pred -CccEEEEccC
Q 017431 256 -GVDYSFECIG 265 (371)
Q Consensus 256 -g~dvvid~~g 265 (371)
.+|++++++|
T Consensus 131 ~didilVnnAG 141 (320)
T PLN02780 131 LDVGVLINNVG 141 (320)
T ss_pred CCccEEEEecC
Confidence 6779998876
|
|
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.22 Score=41.03 Aligned_cols=88 Identities=16% Similarity=0.171 Sum_probs=55.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
.|.+|||+|+|.+|..-++.+...|+ .|++++ ++..+.+.+++.-. ..... +.+ ..-.++|+|+-+++
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~-~~~~~----~~~----~dl~~a~lViaaT~ 79 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYIT-WKQKT----FSN----DDIKDAHLIYAATN 79 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcE-EEecc----cCh----hcCCCceEEEECCC
Confidence 57899999999999998888888899 788774 33223334454211 21111 111 00127999999999
Q ss_pred CHHHHHHHHHHhccCCceEEEE
Q 017431 266 NVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 266 ~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
.++ .+..+...+.. +.++..
T Consensus 80 d~e-~N~~i~~~a~~-~~~vn~ 99 (157)
T PRK06719 80 QHA-VNMMVKQAAHD-FQWVNV 99 (157)
T ss_pred CHH-HHHHHHHHHHH-CCcEEE
Confidence 966 55555556553 445544
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.05 Score=48.91 Aligned_cols=104 Identities=21% Similarity=0.327 Sum_probs=64.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc----CCcE-E--ecCCCCCchHHHHHHhhc-CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF----GVTE-F--VNPKDHDKPIQQVLVDLT-DG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~----g~~~-v--i~~~~~~~~~~~~~~~~~-~g 255 (371)
+++++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. ++ +... . .|..+ ..+....+.+.. .+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~g 84 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTK-REDLERTVKELKNIG 84 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC-HHHHHHHHHHHHhhC
Confidence 4789999988 8999999999999999 8999988877654332 22 3221 1 23333 122223333322 24
Q ss_pred CccEEEEccCCH-------------------------HHHHHHHHHhc-cCCceEEEEccCC
Q 017431 256 GVDYSFECIGNV-------------------------SVMRAALECCH-KGWGTSVIVGVAA 291 (371)
Q Consensus 256 g~dvvid~~g~~-------------------------~~~~~~~~~l~-~~~G~iv~~g~~~ 291 (371)
++|+++++.|.. ...+.++..|. .+.|++|.+++..
T Consensus 85 ~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~ 146 (263)
T PRK08339 85 EPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVA 146 (263)
T ss_pred CCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCcc
Confidence 799999988741 02345555553 2238999887643
|
|
| >PRK07502 cyclohexadienyl dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.089 Score=48.54 Aligned_cols=91 Identities=22% Similarity=0.384 Sum_probs=61.8
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCC
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 266 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~-~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~ 266 (371)
.+|.|+|+|.+|.+.+..++..|. ..|+++++++++.+.+++.|...... .+..+.+ ..+|+|+.|+..
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~-----~~~~~~~-----~~aDvViiavp~ 76 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT-----TSAAEAV-----KGADLVILCVPV 76 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec-----CCHHHHh-----cCCCEEEECCCH
Confidence 579999999999999988888884 37899999998888888877532111 1111111 258999999987
Q ss_pred HH---HHHHHHHHhccCCceEEEEcc
Q 017431 267 VS---VMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 267 ~~---~~~~~~~~l~~~~G~iv~~g~ 289 (371)
.. .++.....++++ ..++.+|.
T Consensus 77 ~~~~~v~~~l~~~l~~~-~iv~dvgs 101 (307)
T PRK07502 77 GASGAVAAEIAPHLKPG-AIVTDVGS 101 (307)
T ss_pred HHHHHHHHHHHhhCCCC-CEEEeCcc
Confidence 43 233333445664 66666655
|
|
| >COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.066 Score=47.01 Aligned_cols=103 Identities=25% Similarity=0.286 Sum_probs=72.5
Q ss_pred hhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----cCCcEEecCCCCCchHHHHHHhhc
Q 017431 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 179 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~v~~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~ 253 (371)
....++.+|++|+=.|.| .|.++.-||++.|. .+|+..+..++..+.+++ +|....+.... .+ +.+..
T Consensus 87 ~~~~gi~pg~rVlEAGtG-SG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~--~D----v~~~~ 159 (256)
T COG2519 87 VARLGISPGSRVLEAGTG-SGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL--GD----VREGI 159 (256)
T ss_pred HHHcCCCCCCEEEEcccC-chHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe--cc----ccccc
Confidence 457889999999987775 57788888888874 699999999987776653 44433111111 11 22222
Q ss_pred CC-CccEEE-EccCCHHHHHHHHHHhccCCceEEEEcc
Q 017431 254 DG-GVDYSF-ECIGNVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 254 ~g-g~dvvi-d~~g~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
.. .+|.+| |.-...+.++.+.+.|.++ |.++.+..
T Consensus 160 ~~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P 196 (256)
T COG2519 160 DEEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSP 196 (256)
T ss_pred cccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcC
Confidence 22 799665 7777778899999999997 99998854
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.044 Score=49.59 Aligned_cols=79 Identities=23% Similarity=0.262 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCc-E---EecCCCCCchHHHHHHhhcC--CCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-E---FVNPKDHDKPIQQVLVDLTD--GGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~-~---vi~~~~~~~~~~~~~~~~~~--gg~d 258 (371)
.++++||+|+ |.+|.+.++.+...|+ +|+++++++++.+.+.+.... . ..|..+ .......+.+... +++|
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~~~~d 80 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTD-FDAIDAVVADAEATFGPID 80 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC-HHHHHHHHHHHHHHhCCCC
Confidence 3578999988 9999999998888999 899999988776655443221 1 123333 1222233333222 3689
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
+++++.|.
T Consensus 81 ~vv~~ag~ 88 (277)
T PRK06180 81 VLVNNAGY 88 (277)
T ss_pred EEEECCCc
Confidence 99999875
|
|
| >PRK08618 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.082 Score=49.20 Aligned_cols=94 Identities=16% Similarity=0.092 Sum_probs=63.7
Q ss_pred CCCCEEEEEcCChHHHHHHHH-HHHcCCCeEEEEcCChhhHHH-HHh----cCCcEEecCCCCCchHHHHHHhhcCCCcc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEG-AKAAGASRVIGIDIDPKKFDR-AKN----FGVTEFVNPKDHDKPIQQVLVDLTDGGVD 258 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~l-a~~~g~~~v~~v~~~~~~~~~-~~~----~g~~~vi~~~~~~~~~~~~~~~~~~gg~d 258 (371)
...++++|+|+|..|.+.+.. +...++++|.+.++++++.+. +++ ++.. +.... ++.+.+ ...|
T Consensus 125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~----~~~~~~-----~~aD 194 (325)
T PRK08618 125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVN----SADEAI-----EEAD 194 (325)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeC----CHHHHH-----hcCC
Confidence 356789999999999876654 456788899999999887653 333 3432 21122 233333 2589
Q ss_pred EEEEccCCHHHHHHHHHHhccCCceEEEEccCC
Q 017431 259 YSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 259 vvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
+|+.|+++.+ .... .++++| -.+..+|.+.
T Consensus 195 iVi~aT~s~~-p~i~-~~l~~G-~hV~~iGs~~ 224 (325)
T PRK08618 195 IIVTVTNAKT-PVFS-EKLKKG-VHINAVGSFM 224 (325)
T ss_pred EEEEccCCCC-cchH-HhcCCC-cEEEecCCCC
Confidence 9999998865 3334 788896 8888888864
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.063 Score=49.04 Aligned_cols=37 Identities=22% Similarity=0.313 Sum_probs=32.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
.+++++||+|+|++|.+++..+...|+++|+++.++.
T Consensus 124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 3578999999999999988888889997799998875
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.046 Score=48.46 Aligned_cols=79 Identities=28% Similarity=0.334 Sum_probs=49.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh---cCCc-E--EecCCCCCchHHHHHHhhc--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN---FGVT-E--FVNPKDHDKPIQQVLVDLT--DG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~---~g~~-~--vi~~~~~~~~~~~~~~~~~--~g 255 (371)
.++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ .+ .+.. . ..|..+ .......+.+.. .+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 82 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSD-PDSAKAMADATVSAFG 82 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence 4678999988 9999999998888899 899998887654322 22 2221 1 123322 122222222221 13
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|++|+++|.
T Consensus 83 ~id~vi~~ag~ 93 (250)
T PRK07774 83 GIDYLVNNAAI 93 (250)
T ss_pred CCCEEEECCCC
Confidence 69999998883
|
|
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.028 Score=51.12 Aligned_cols=94 Identities=16% Similarity=0.143 Sum_probs=58.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
..+++|||+|+|++|.+++..+...|+.+|+++.++.++.+.+ ++++....+.. + .+..+.+ ..+|+|++|
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~--~~~~~~~-----~~~DivIna 192 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-D--LELQEEL-----ADFDLIINA 192 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-c--ccchhcc-----ccCCEEEEC
Confidence 4578999999999999999999999966999999988876544 44432110101 0 0000000 269999999
Q ss_pred cCCHHH-----HHHHHHHhccCCceEEEE
Q 017431 264 IGNVSV-----MRAALECCHKGWGTSVIV 287 (371)
Q Consensus 264 ~g~~~~-----~~~~~~~l~~~~G~iv~~ 287 (371)
++.... .......+.+. ..++++
T Consensus 193 Tp~g~~~~~~~~~~~~~~l~~~-~~v~Di 220 (278)
T PRK00258 193 TSAGMSGELPLPPLPLSLLRPG-TIVYDM 220 (278)
T ss_pred CcCCCCCCCCCCCCCHHHcCCC-CEEEEe
Confidence 875210 01223456664 566555
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.15 Score=45.45 Aligned_cols=79 Identities=20% Similarity=0.268 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc-----CCcEE---ecCCCCCchHHHHHHhhc--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF-----GVTEF---VNPKDHDKPIQQVLVDLT-- 253 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~-----g~~~v---i~~~~~~~~~~~~~~~~~-- 253 (371)
.++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+. ++ +.... .|..+ .......+.+..
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 85 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSD-DEDRRAILDWVEDH 85 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC-HHHHHHHHHHHHHH
Confidence 4789999988 9999999999999999 8888888776544332 22 22111 23222 122222232222
Q ss_pred CCCccEEEEccCC
Q 017431 254 DGGVDYSFECIGN 266 (371)
Q Consensus 254 ~gg~dvvid~~g~ 266 (371)
-+++|+++++.|.
T Consensus 86 ~g~id~li~~ag~ 98 (257)
T PRK09242 86 WDGLHILVNNAGG 98 (257)
T ss_pred cCCCCEEEECCCC
Confidence 1379999999874
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.041 Score=48.98 Aligned_cols=79 Identities=20% Similarity=0.241 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h---cCCcE---EecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N---FGVTE---FVNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~---~g~~~---vi~~~~~~~~~~~~~~~~~~--g 255 (371)
+++++||+|+ |++|.+.+..+...|+ +|+.++++.++.+.+. + .+... ..|..+ .....+.+.+... +
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 85 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ-HQQVTSMLDQVTAELG 85 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 4789999988 9999999999989999 8988888876654332 2 23221 123322 1223333332221 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|+++++.|.
T Consensus 86 ~id~lv~~ag~ 96 (253)
T PRK05867 86 GIDIAVCNAGI 96 (253)
T ss_pred CCCEEEECCCC
Confidence 79999998774
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.081 Score=47.04 Aligned_cols=79 Identities=24% Similarity=0.305 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh---cCCcE-E--ecCCCCCchHHHHHHhhc--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN---FGVTE-F--VNPKDHDKPIQQVLVDLT--DG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~---~g~~~-v--i~~~~~~~~~~~~~~~~~--~g 255 (371)
++++|||+|+ |.+|...++.+...|+ +|+++++++++.+.+ .+ .+... . .|..+ .......+.+.. .+
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 80 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTD-EEAINAGIDYAVETFG 80 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 4579999987 9999999998888899 888888887755433 22 23221 1 22222 122222222221 13
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|+++.+++.
T Consensus 81 ~~d~vi~~a~~ 91 (258)
T PRK12429 81 GVDILVNNAGI 91 (258)
T ss_pred CCCEEEECCCC
Confidence 69999998863
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.14 Score=47.46 Aligned_cols=95 Identities=17% Similarity=0.154 Sum_probs=59.6
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEe-cCCCCCchHHHHHHhhcCCCccEEEEccCC
Q 017431 189 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NPKDHDKPIQQVLVDLTDGGVDYSFECIGN 266 (371)
Q Consensus 189 ~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi-~~~~~~~~~~~~~~~~~~gg~dvvid~~g~ 266 (371)
+|||+|+ |-+|...+..+...|. +|.+++++.++...+...+...+. |..+ . +.+.+... ++|+||++++.
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d--~---~~l~~al~-g~d~Vi~~~~~ 74 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSL--P---ETLPPSFK-GVTAIIDASTS 74 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCC--H---HHHHHHHC-CCCEEEECCCC
Confidence 6999988 9999999999988999 899988887665555555553332 2222 1 12222222 68999998763
Q ss_pred HH------------HHHHHHHHhccC-CceEEEEccC
Q 017431 267 VS------------VMRAALECCHKG-WGTSVIVGVA 290 (371)
Q Consensus 267 ~~------------~~~~~~~~l~~~-~G~iv~~g~~ 290 (371)
.. ....+++.+... -.++|.++..
T Consensus 75 ~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 75 RPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred CCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 11 123444555442 1378887663
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.058 Score=47.77 Aligned_cols=78 Identities=21% Similarity=0.372 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcE---EecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE---FVNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~---vi~~~~~~~~~~~~~~~~~~--g 255 (371)
+++++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++.+... ..|..+ .....+.+..... +
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 81 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTD-EEDVEATFAQIAEDFG 81 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 4789999988 9999999999999999 789898887654432 2234322 122222 1223233333222 3
Q ss_pred CccEEEEccC
Q 017431 256 GVDYSFECIG 265 (371)
Q Consensus 256 g~dvvid~~g 265 (371)
++|.+|+++|
T Consensus 82 ~id~vi~~ag 91 (253)
T PRK08217 82 QLNGLINNAG 91 (253)
T ss_pred CCCEEEECCC
Confidence 6899999887
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.15 Score=46.51 Aligned_cols=104 Identities=19% Similarity=0.216 Sum_probs=60.9
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh-H----HHHHhcCCcEE---ecCCCCCchHHHHHHhhcC
Q 017431 184 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-F----DRAKNFGVTEF---VNPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 184 ~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~-~----~~~~~~g~~~v---i~~~~~~~~~~~~~~~~~~ 254 (371)
.-+++++||+|+ |.+|.+.+..+...|+ +|+.+.+++++ . +.++..+.... .|..+ .....+.+.+...
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~i~~ 120 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSD-EAFCKDAVEETVR 120 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHH
Confidence 345789999988 9999998888888899 78887766432 1 12223343221 22222 1222222222221
Q ss_pred --CCccEEEEccCCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 255 --GGVDYSFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 255 --gg~dvvid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+++|++++++|.. .+.+.+.+.+.+. |++|.+++.
T Consensus 121 ~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~-g~iV~isS~ 183 (290)
T PRK06701 121 ELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQG-SAIINTGSI 183 (290)
T ss_pred HcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhC-CeEEEEecc
Confidence 3689999887741 0123444555665 899988763
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.12 Score=51.27 Aligned_cols=79 Identities=24% Similarity=0.362 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCcE---EecCCCCCchHHHHHHhhcC--CCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTE---FVNPKDHDKPIQQVLVDLTD--GGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~g~~~---vi~~~~~~~~~~~~~~~~~~--gg~d 258 (371)
+++++||+|+ +++|.+.++.+...|+ +|+.++++.++.+ +.++++... ..|..+ .....+.+.+... +++|
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~iD 81 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSD-EAQIREGFEQLHREFGRID 81 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCC-HHHHHHHHHHHHHHhCCCC
Confidence 5789999988 8999999999999999 8999988877654 444555432 233333 1233333333222 3799
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
+++++.|.
T Consensus 82 ~li~nag~ 89 (520)
T PRK06484 82 VLVNNAGV 89 (520)
T ss_pred EEEECCCc
Confidence 99998763
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.071 Score=48.79 Aligned_cols=79 Identities=23% Similarity=0.322 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcE-E--ecCCCCCchHHHHHHhhc--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-F--VNPKDHDKPIQQVLVDLT--DG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~-v--i~~~~~~~~~~~~~~~~~--~g 255 (371)
.++++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+. +.+... . .|..+ .....+.+.... .+
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~~g 116 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSD-LDAVDALVADVEKRIG 116 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4578999988 9999999998888899 8999988877654332 223321 2 23222 122222232221 23
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|+++++.|.
T Consensus 117 ~id~li~~AG~ 127 (293)
T PRK05866 117 GVDILINNAGR 127 (293)
T ss_pred CCCEEEECCCC
Confidence 79999999874
|
|
| >TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.061 Score=52.76 Aligned_cols=78 Identities=31% Similarity=0.409 Sum_probs=54.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh---------------------hhHHHHHhcCCcEEecCCCCCc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP---------------------KKFDRAKNFGVTEFVNPKDHDK 243 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~---------------------~~~~~~~~~g~~~vi~~~~~~~ 243 (371)
..+++|+|+|+|+.|+.++..++..|+ .|++++..+ ...+.++++|++..++..- ..
T Consensus 139 ~~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v-~~ 216 (467)
T TIGR01318 139 PTGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEV-GR 216 (467)
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEe-CC
Confidence 368899999999999999999999999 788887654 2346677888865544321 11
Q ss_pred hHHHHHHhhcCCCccEEEEccCCH
Q 017431 244 PIQQVLVDLTDGGVDYSFECIGNV 267 (371)
Q Consensus 244 ~~~~~~~~~~~gg~dvvid~~g~~ 267 (371)
+. .+.+.. .++|.+|.++|..
T Consensus 217 ~~--~~~~~~-~~~D~vilAtGa~ 237 (467)
T TIGR01318 217 DI--SLDDLL-EDYDAVFLGVGTY 237 (467)
T ss_pred cc--CHHHHH-hcCCEEEEEeCCC
Confidence 10 111111 2699999999974
|
This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli. |
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.13 Score=46.53 Aligned_cols=78 Identities=18% Similarity=0.205 Sum_probs=49.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCc-EE--ecCCCCCchHHHHHHhhc--CCCccE
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVT-EF--VNPKDHDKPIQQVLVDLT--DGGVDY 259 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~-~g~~-~v--i~~~~~~~~~~~~~~~~~--~gg~dv 259 (371)
+++|||+|+ |.+|...++.+...|+ +|+.+++++++.+.+.+ ++.. .. .|..+ .....+.+.+.. .+++|.
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d~ 80 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTD-RAAVFAAVETAVEHFGRLDI 80 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 468999988 9999998888888898 89998888776654433 3221 11 22222 122222233221 137899
Q ss_pred EEEccCC
Q 017431 260 SFECIGN 266 (371)
Q Consensus 260 vid~~g~ 266 (371)
++++.|.
T Consensus 81 vi~~ag~ 87 (275)
T PRK08263 81 VVNNAGY 87 (275)
T ss_pred EEECCCC
Confidence 9999875
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.074 Score=48.29 Aligned_cols=77 Identities=17% Similarity=0.223 Sum_probs=56.2
Q ss_pred CCCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEE
Q 017431 184 VEPGSIVAVFGLGT-VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE 262 (371)
Q Consensus 184 ~~~g~~VlI~Gag~-vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid 262 (371)
.-.|++|+|+|+|. +|...+.++...|+ .|+.+.+..+ + +.+.+ ..+|++++
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t~--~-------------------L~~~~-----~~aDIvI~ 208 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRTQ--N-------------------LPELV-----KQADIIVG 208 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCch--h-------------------HHHHh-----ccCCEEEE
Confidence 46789999999976 99999999999999 8888754211 1 11111 25999999
Q ss_pred ccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 263 CIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 263 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
++|.+..+. .+.+.++ ..++++|..
T Consensus 209 AtG~~~~v~--~~~lk~g-avViDvg~n 233 (283)
T PRK14192 209 AVGKPELIK--KDWIKQG-AVVVDAGFH 233 (283)
T ss_pred ccCCCCcCC--HHHcCCC-CEEEEEEEe
Confidence 998866433 3558886 888888764
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.074 Score=49.18 Aligned_cols=79 Identities=22% Similarity=0.238 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEE--ecCCCCCchHHHHHHhhcC--CCccE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF--VNPKDHDKPIQQVLVDLTD--GGVDY 259 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~v--i~~~~~~~~~~~~~~~~~~--gg~dv 259 (371)
.+++|||+|+ |++|.+.+..+...|+ +|++++++.++.+.+ .++..... .|..+ .......+.+... +++|+
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d-~~~v~~~~~~~~~~~~~iD~ 102 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLAD-LESVRAFAERFLDSGRRIDI 102 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCC-HHHHHHHHHHHHhcCCCCCE
Confidence 4679999988 9999999888888899 888888887765433 33321122 23333 1222223333222 37999
Q ss_pred EEEccCC
Q 017431 260 SFECIGN 266 (371)
Q Consensus 260 vid~~g~ 266 (371)
+++++|.
T Consensus 103 li~nAg~ 109 (315)
T PRK06196 103 LINNAGV 109 (315)
T ss_pred EEECCCC
Confidence 9998873
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.098 Score=46.71 Aligned_cols=81 Identities=23% Similarity=0.289 Sum_probs=49.2
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCChhh-HH-H---HHhcCC--cEE--ecCCCCCchHHHHHHhh
Q 017431 184 VEPGSIVAVFGL-GTVGLAVAEGAKAAG-ASRVIGIDIDPKK-FD-R---AKNFGV--TEF--VNPKDHDKPIQQVLVDL 252 (371)
Q Consensus 184 ~~~g~~VlI~Ga-g~vG~~ai~la~~~g-~~~v~~v~~~~~~-~~-~---~~~~g~--~~v--i~~~~~~~~~~~~~~~~ 252 (371)
+..+++|||+|+ |++|.+.++-+...| + +|+++++++++ .+ + +++.+. .++ .|..+ ..+..+.+.+.
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~-~~~~~~~~~~~ 82 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALD-TDSHPKVIDAA 82 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCC-hHHHHHHHHHH
Confidence 456789999988 999999887766664 7 88888887764 32 2 223332 122 33332 12222233333
Q ss_pred cC-CCccEEEEccCC
Q 017431 253 TD-GGVDYSFECIGN 266 (371)
Q Consensus 253 ~~-gg~dvvid~~g~ 266 (371)
.. +++|+++++.|.
T Consensus 83 ~~~g~id~li~~ag~ 97 (253)
T PRK07904 83 FAGGDVDVAIVAFGL 97 (253)
T ss_pred HhcCCCCEEEEeeec
Confidence 22 479998887754
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.059 Score=48.09 Aligned_cols=80 Identities=19% Similarity=0.270 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH----HHHhcCCcEE---ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD----RAKNFGVTEF---VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~----~~~~~g~~~v---i~~~~~~~~~~~~~~~~~~--g 255 (371)
++++++|+|+ |.+|...++.+...|++.|+++++++++.+ .+++.+.... .|..+ ...+.+.+..... +
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD-VEDCRRVVAAADEAFG 83 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 5689999988 999999999999999944889888765443 2233443321 23332 1222222222211 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|+++++.+.
T Consensus 84 ~id~li~~ag~ 94 (260)
T PRK06198 84 RLDALVNAAGL 94 (260)
T ss_pred CCCEEEECCCc
Confidence 69999999874
|
|
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.083 Score=48.17 Aligned_cols=37 Identities=14% Similarity=0.227 Sum_probs=31.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
.+++++||+|+|+.+.+++..+...|+++++++.|++
T Consensus 122 ~~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~ 158 (288)
T PRK12749 122 IKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRD 158 (288)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 3678999999998998877767778998999999884
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.08 Score=47.43 Aligned_cols=79 Identities=23% Similarity=0.336 Sum_probs=49.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc--CCc-EE--ecCCCCCchHHHHHHhhc-CCCc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF--GVT-EF--VNPKDHDKPIQQVLVDLT-DGGV 257 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~--g~~-~v--i~~~~~~~~~~~~~~~~~-~gg~ 257 (371)
++.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+. ++ +.. +. .|..+ ............ .+.+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~~i 81 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTS-EAGREAVLARAREMGGI 81 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHhcCCC
Confidence 4678999987 9999999988888999 8999988877654433 22 211 11 22222 112222211111 2478
Q ss_pred cEEEEccCC
Q 017431 258 DYSFECIGN 266 (371)
Q Consensus 258 dvvid~~g~ 266 (371)
|++++++|.
T Consensus 82 d~lv~~ag~ 90 (263)
T PRK09072 82 NVLINNAGV 90 (263)
T ss_pred CEEEECCCC
Confidence 999998875
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.15 Score=46.67 Aligned_cols=102 Identities=18% Similarity=0.153 Sum_probs=60.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh--hhHHH----HHhcCCcE---EecCCCCCchHHHHHHhhcC-
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP--KKFDR----AKNFGVTE---FVNPKDHDKPIQQVLVDLTD- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~--~~~~~----~~~~g~~~---vi~~~~~~~~~~~~~~~~~~- 254 (371)
+++++||+|+ |++|.+.++.+...|+ +|+.+.++. ++.+. +++.+... ..|..+ .......+.+...
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 125 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD-EKFARSLVHEAHKA 125 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 5689999988 9999999988888999 787776543 22222 22334322 123322 1222233333222
Q ss_pred -CCccEEEEccCCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 255 -GGVDYSFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 255 -gg~dvvid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+++|+++++.|.. .+++.++..|..+ |++|.+++.
T Consensus 126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~iv~iSS~ 187 (294)
T PRK07985 126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG-ASIITTSSI 187 (294)
T ss_pred hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC-CEEEEECCc
Confidence 3789999887631 1234555556675 899988764
|
|
| >PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.074 Score=54.35 Aligned_cols=75 Identities=29% Similarity=0.355 Sum_probs=54.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh---------------------hHHHHHhcCCcEEecCCCC-Cc
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK---------------------KFDRAKNFGVTEFVNPKDH-DK 243 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~---------------------~~~~~~~~g~~~vi~~~~~-~~ 243 (371)
.+++|+|+|+|+.|+.++..++..|+ +|++++..+. ..++++++|++..++..-. +.
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 48999999999999999999999999 7888876652 4566778888655543211 11
Q ss_pred hHHHHHHhhcCCCccEEEEccCC
Q 017431 244 PIQQVLVDLTDGGVDYSFECIGN 266 (371)
Q Consensus 244 ~~~~~~~~~~~gg~dvvid~~g~ 266 (371)
.+. ++. .++|.+|.++|.
T Consensus 388 ~~~----~l~-~~~DaV~latGa 405 (639)
T PRK12809 388 TFS----DLT-SEYDAVFIGVGT 405 (639)
T ss_pred CHH----HHH-hcCCEEEEeCCC
Confidence 221 121 269999999887
|
|
| >PRK07402 precorrin-6B methylase; Provisional | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.26 Score=42.18 Aligned_cols=104 Identities=22% Similarity=0.333 Sum_probs=61.5
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCcE--EecCCCCCchHHHHHHh
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLVD 251 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~~--vi~~~~~~~~~~~~~~~ 251 (371)
+....++.++++||=+|+| .|..++.+++.....+|++++.+++..+.+++ ++... ++. .+..+.+..
T Consensus 32 l~~~l~~~~~~~VLDiG~G-~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~-----~d~~~~~~~ 105 (196)
T PRK07402 32 LISQLRLEPDSVLWDIGAG-TGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIE-----GSAPECLAQ 105 (196)
T ss_pred HHHhcCCCCCCEEEEeCCC-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEE-----CchHHHHhh
Confidence 3455567788888878774 34455566665433499999999987766643 55432 221 112122222
Q ss_pred hcCCCccE-EEEccCC-HHHHHHHHHHhccCCceEEEEcc
Q 017431 252 LTDGGVDY-SFECIGN-VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 252 ~~~gg~dv-vid~~g~-~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
.. ..+|. .++.... ...++.+.+.|+++ |+++....
T Consensus 106 ~~-~~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~ 143 (196)
T PRK07402 106 LA-PAPDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATAS 143 (196)
T ss_pred CC-CCCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEee
Confidence 21 23444 4443222 36688999999997 99887743
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.073 Score=47.44 Aligned_cols=79 Identities=19% Similarity=0.209 Sum_probs=48.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHHHhcCCcEE-ecCCCCCchHHHHHHhhc--CCCccEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYS 260 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~-~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~--~gg~dvv 260 (371)
.++++||+|+ |++|.+.++.+...|+ +|+.+.+ +++..+.+++.+...+ .|..+ .....+.+.+.. .+++|++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id~l 83 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGN-RDQVKKSKEVVEKEFGRVDVL 83 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 4689999988 9999999988888999 6766544 3334444443333221 23333 122333333322 1379999
Q ss_pred EEccCC
Q 017431 261 FECIGN 266 (371)
Q Consensus 261 id~~g~ 266 (371)
+++.|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06463 84 VNNAGI 89 (255)
T ss_pred EECCCc
Confidence 998864
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.22 Score=43.80 Aligned_cols=102 Identities=19% Similarity=0.210 Sum_probs=59.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-hHH----HHHhcCCcE-E--ecCCCCCchHHHHHHhhc--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KFD----RAKNFGVTE-F--VNPKDHDKPIQQVLVDLT--D 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~-~~~----~~~~~g~~~-v--i~~~~~~~~~~~~~~~~~--~ 254 (371)
+++++||+|+ |.+|...++.+...|+ +++.+.++.+ +.+ .+++.+... . .|..+ .....+.+.+.. .
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 81 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVAD-AAAVTRLFDAAETAF 81 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 5689999987 9999999999999999 6666654332 221 222334321 1 22222 122222222221 1
Q ss_pred CCccEEEEccCCH-------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 255 GGVDYSFECIGNV-------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 255 gg~dvvid~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+++|+++++.|.. ..++.+++.+..+ |+++.+++.
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~ 141 (245)
T PRK12937 82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQG-GRIINLSTS 141 (245)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccC-cEEEEEeec
Confidence 3799999988741 1234455566675 899988764
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.098 Score=45.96 Aligned_cols=78 Identities=18% Similarity=0.175 Sum_probs=49.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh-HHHHHhcCCcEE-ecCCCCCchHHHHHHhhcC--CCccEEE
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-FDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTD--GGVDYSF 261 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~-~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~--gg~dvvi 261 (371)
++++||+|+ +++|.+.++.+...|+ +|+.+++++++ .+.+++.+...+ .|..+ .......+.+... +++|+++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~lv 79 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFST-NAGIMAFIDELKQHTDGLRAII 79 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCC-HHHHHHHHHHHHhhCCCccEEE
Confidence 468999988 8999999998888999 88888776643 334445554221 23222 1222333333322 3699999
Q ss_pred EccCC
Q 017431 262 ECIGN 266 (371)
Q Consensus 262 d~~g~ 266 (371)
++.|.
T Consensus 80 ~~ag~ 84 (236)
T PRK06483 80 HNASD 84 (236)
T ss_pred ECCcc
Confidence 98874
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.094 Score=46.93 Aligned_cols=102 Identities=18% Similarity=0.308 Sum_probs=61.8
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEEcCChhhH----HHHHhcCCcEEe--cCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGLG---TVGLAVAEGAKAAGASRVIGIDIDPKKF----DRAKNFGVTEFV--NPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Gag---~vG~~ai~la~~~g~~~v~~v~~~~~~~----~~~~~~g~~~vi--~~~~~~~~~~~~~~~~~~-- 254 (371)
+|+++||+|++ ++|.+.++.+...|+ +|+.++++++.. ++.++++....+ |..+ ..+....+.+...
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~ 86 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVRE-PGQLEAVFARIAEEW 86 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCC-HHHHHHHHHHHHHHc
Confidence 47899999873 899998888888999 788887775432 222334432222 2222 1222222222221
Q ss_pred CCccEEEEccCCH--------------H---------------HHHHHHHHhccCCceEEEEccC
Q 017431 255 GGVDYSFECIGNV--------------S---------------VMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 255 gg~dvvid~~g~~--------------~---------------~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+.+|+++++.|.. + ..+.++..|..+ |+++.+++.
T Consensus 87 g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~-g~Ii~iss~ 150 (258)
T PRK07533 87 GRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNG-GSLLTMSYY 150 (258)
T ss_pred CCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccC-CEEEEEecc
Confidence 4799999987631 0 135566667775 898887653
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.059 Score=48.02 Aligned_cols=79 Identities=29% Similarity=0.380 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcE-E--ecCCCCCchHHHHHHhhc--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLT--DG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~~~~~~--~g 255 (371)
+++++||+|+ |.+|.+.++.+...|+ +|+.+++++++.+.+ ++.|... . .|..+ .......+.+.. .+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 86 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD-HDAVRAAIDAFEAEIG 86 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC-HHHHHHHHHHHHHhcC
Confidence 5789999988 9999999998888899 888888887654322 2233222 1 23332 122333333322 23
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
.+|+++++.|.
T Consensus 87 ~~d~li~~ag~ 97 (255)
T PRK07523 87 PIDILVNNAGM 97 (255)
T ss_pred CCCEEEECCCC
Confidence 79999998874
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.061 Score=48.22 Aligned_cols=79 Identities=25% Similarity=0.320 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h----cCCcE----EecCCCCCchHHHHHHhhcC-
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N----FGVTE----FVNPKDHDKPIQQVLVDLTD- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~----~g~~~----vi~~~~~~~~~~~~~~~~~~- 254 (371)
.++++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. + .+... ..|..+ .....+.+.+...
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~ 84 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLD-EADVAAFAAAVEAR 84 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC-HHHHHHHHHHHHHh
Confidence 5789999988 8999999999989999 8999988877654322 1 11112 123333 1222222333222
Q ss_pred -CCccEEEEccCC
Q 017431 255 -GGVDYSFECIGN 266 (371)
Q Consensus 255 -gg~dvvid~~g~ 266 (371)
+.+|++++++|.
T Consensus 85 ~g~id~li~~Ag~ 97 (265)
T PRK07062 85 FGGVDMLVNNAGQ 97 (265)
T ss_pred cCCCCEEEECCCC
Confidence 379999999874
|
|
| >COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.11 Score=45.28 Aligned_cols=95 Identities=25% Similarity=0.306 Sum_probs=62.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE--EecCCCCCchHHHHHHhhcCCCccEEEE
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--FVNPKDHDKPIQQVLVDLTDGGVDYSFE 262 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~--vi~~~~~~~~~~~~~~~~~~gg~dvvid 262 (371)
-+|.+||=+|+| .|+++..+|+. |+ .|+++|-+++-.+.++.-.... -++|.. ...+.+... ++.||+|++
T Consensus 58 l~g~~vLDvGCG-gG~Lse~mAr~-Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~---~~~edl~~~-~~~FDvV~c 130 (243)
T COG2227 58 LPGLRVLDVGCG-GGILSEPLARL-GA-SVTGIDASEKPIEVAKLHALESGVNIDYRQ---ATVEDLASA-GGQFDVVTC 130 (243)
T ss_pred CCCCeEEEecCC-ccHhhHHHHHC-CC-eeEEecCChHHHHHHHHhhhhccccccchh---hhHHHHHhc-CCCccEEEE
Confidence 478899988885 25777777765 78 9999999999888887432211 133433 222222222 138999987
Q ss_pred -----ccCCH-HHHHHHHHHhccCCceEEEE
Q 017431 263 -----CIGNV-SVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 263 -----~~g~~-~~~~~~~~~l~~~~G~iv~~ 287 (371)
-+..+ ..++.+.+.++|+ |.++.-
T Consensus 131 mEVlEHv~dp~~~~~~c~~lvkP~-G~lf~S 160 (243)
T COG2227 131 MEVLEHVPDPESFLRACAKLVKPG-GILFLS 160 (243)
T ss_pred hhHHHccCCHHHHHHHHHHHcCCC-cEEEEe
Confidence 34443 3578899999996 887644
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.1 Score=44.87 Aligned_cols=83 Identities=30% Similarity=0.385 Sum_probs=56.4
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCcEEecCCCCCchHHHHHHhhcCCCccEEEE
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE 262 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid 262 (371)
--+|++|+|+|.|.+|..+++.+...|+ +|+++++++++.+.+. .+++. .++..+ +....+|+++-
T Consensus 25 ~l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~-----------l~~~~~Dv~vp 91 (200)
T cd01075 25 SLEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT-VVAPEE-----------IYSVDADVFAP 91 (200)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE-EEcchh-----------hccccCCEEEe
Confidence 3467899999999999999999999999 8999998888766554 44642 332211 11115888886
Q ss_pred ccCCHHHHHHHHHHhcc
Q 017431 263 CIGNVSVMRAALECCHK 279 (371)
Q Consensus 263 ~~g~~~~~~~~~~~l~~ 279 (371)
|..+...-...++.|..
T Consensus 92 ~A~~~~I~~~~~~~l~~ 108 (200)
T cd01075 92 CALGGVINDDTIPQLKA 108 (200)
T ss_pred cccccccCHHHHHHcCC
Confidence 65543434555555543
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.067 Score=48.29 Aligned_cols=79 Identities=22% Similarity=0.352 Sum_probs=49.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh---cCCcE---EecCCCCCchHHHHHHhhcC--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN---FGVTE---FVNPKDHDKPIQQVLVDLTD--GG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~---~g~~~---vi~~~~~~~~~~~~~~~~~~--gg 256 (371)
+++++||+|+ +++|.+.++.+...|+ +|++++++++..+.+.+ .+... ..|..+ .......+.+... +.
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISD-EQQVKDFASEIKEQFGR 82 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCC-HHHHHHHHHHHHHHcCC
Confidence 5789999988 9999998888888899 88888887433333333 23211 133332 1223333333221 36
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|+++++.|.
T Consensus 83 id~li~~Ag~ 92 (272)
T PRK08589 83 VDVLFNNAGV 92 (272)
T ss_pred cCEEEECCCC
Confidence 8999998764
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.09 Score=50.19 Aligned_cols=91 Identities=29% Similarity=0.387 Sum_probs=56.0
Q ss_pred EEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh--cCCcE---EecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 190 VAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN--FGVTE---FVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 190 VlI~Gag~vG~~ai~la~~~g~-~~v~~v~~~~~~~~~~~~--~g~~~---vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
|+|+|+|.+|..+++.+...+- .+|++.+++.++.+.+.+ .+... .+|..+ .+.+.+... +.|+|++|
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~-----~~~l~~~~~-~~dvVin~ 74 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND-----PESLAELLR-GCDVVINC 74 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT-----HHHHHHHHT-TSSEEEE-
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC-----HHHHHHHHh-cCCEEEEC
Confidence 6889999999999998887764 389999999998765543 22211 233332 122444332 46999999
Q ss_pred cCCHHHHHHHHHHhccCCceEEEE
Q 017431 264 IGNVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 264 ~g~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
+|.......+-.|+..+ -.+++.
T Consensus 75 ~gp~~~~~v~~~~i~~g-~~yvD~ 97 (386)
T PF03435_consen 75 AGPFFGEPVARACIEAG-VHYVDT 97 (386)
T ss_dssp SSGGGHHHHHHHHHHHT--EEEES
T ss_pred CccchhHHHHHHHHHhC-CCeecc
Confidence 99754455555666664 667663
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.083 Score=47.17 Aligned_cols=78 Identities=15% Similarity=0.144 Sum_probs=49.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCC--c-EE--ecCCCCCchHHHHHHhhcC--CCc
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGV--T-EF--VNPKDHDKPIQQVLVDLTD--GGV 257 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~--~-~v--i~~~~~~~~~~~~~~~~~~--gg~ 257 (371)
+.+|||+|+ |++|.+.+..+...|+ +|+.++++.++.+.+. ++.. . .. .|..+ .....+.+.+... +.+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRD-ADALAAAAADFIAAHGLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCC-HHHHHHHHHHHHHhCCCC
Confidence 468999987 9999998888888899 8999988877665433 2221 1 11 23322 1223333333222 358
Q ss_pred cEEEEccCC
Q 017431 258 DYSFECIGN 266 (371)
Q Consensus 258 dvvid~~g~ 266 (371)
|++++++|.
T Consensus 80 d~lv~~ag~ 88 (257)
T PRK07024 80 DVVIANAGI 88 (257)
T ss_pred CEEEECCCc
Confidence 999998763
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.083 Score=47.13 Aligned_cols=79 Identities=19% Similarity=0.250 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhc--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~--~g 255 (371)
+++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++.+.... .|..+ .....+.+.+.. .+
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 83 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTN-EDAVNAGIDKVAERFG 83 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 4689999988 9999999998889999 788888887554322 33444322 12222 122222222211 13
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
.+|+++++.|.
T Consensus 84 ~~d~vi~~ag~ 94 (262)
T PRK13394 84 SVDILVSNAGI 94 (262)
T ss_pred CCCEEEECCcc
Confidence 68999998874
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.074 Score=47.33 Aligned_cols=79 Identities=20% Similarity=0.315 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~~--g 255 (371)
+++++||+|+ |++|.+.+..+...|+ +|+.+++++++.+.+ ++.+.... .|..+ .......+.+... +
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 82 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD-EAYAKALVALAVERFG 82 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHhcC
Confidence 4679999988 8999999988888999 888888887765433 22343221 22222 1222222222221 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
.+|++++++|.
T Consensus 83 ~id~li~~ag~ 93 (254)
T PRK07478 83 GLDIAFNNAGT 93 (254)
T ss_pred CCCEEEECCCC
Confidence 79999998874
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.12 Score=45.61 Aligned_cols=80 Identities=25% Similarity=0.325 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCC-c---EEecCCCC-Cch---HHHHHHhh
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGV-T---EFVNPKDH-DKP---IQQVLVDL 252 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~-~---~vi~~~~~-~~~---~~~~~~~~ 252 (371)
++++++|+|+ |.+|...++.+...|+ +|+++++++++.+.+. +.+. . ...|..+. ... +.+.+.+.
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 4679999988 9999999988888999 8999988887654332 2221 1 11222110 112 22233333
Q ss_pred cCCCccEEEEccCC
Q 017431 253 TDGGVDYSFECIGN 266 (371)
Q Consensus 253 ~~gg~dvvid~~g~ 266 (371)
..+.+|++++++|.
T Consensus 84 ~~~~id~vi~~ag~ 97 (239)
T PRK08703 84 TQGKLDGIVHCAGY 97 (239)
T ss_pred hCCCCCEEEEeccc
Confidence 32478999998884
|
|
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.15 Score=44.93 Aligned_cols=35 Identities=40% Similarity=0.512 Sum_probs=31.2
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
..+|+|+|.|++|..++..+-..|..+++.++.+.
T Consensus 11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~ 45 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDV 45 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCE
Confidence 46899999999999999999999999999998654
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK11207 tellurite resistance protein TehB; Provisional | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.058 Score=46.30 Aligned_cols=98 Identities=20% Similarity=0.291 Sum_probs=60.4
Q ss_pred cCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCcEEecCCCCCchHHHHHHhhc-CC
Q 017431 181 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT-DG 255 (371)
Q Consensus 181 ~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~-~g 255 (371)
.....++.+||-+|+|. |..+..+++. |. +|++++.+++-.+.+++ .+...+ .... .++ .+.. .+
T Consensus 25 ~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~--~d~----~~~~~~~ 94 (197)
T PRK11207 25 AVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAV--VDL----NNLTFDG 94 (197)
T ss_pred hcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEe--cCh----hhCCcCC
Confidence 33455678999998863 6677778875 77 99999999876665543 232211 0000 111 1111 23
Q ss_pred CccEEEEccC----C----HHHHHHHHHHhccCCceEEEEcc
Q 017431 256 GVDYSFECIG----N----VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 256 g~dvvid~~g----~----~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
.||+|+.... . ...+..+.+.|+++ |.++.+..
T Consensus 95 ~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~~~ 135 (197)
T PRK11207 95 EYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIVAA 135 (197)
T ss_pred CcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEEEE
Confidence 7999997533 1 24577888889997 99665533
|
|
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.35 Score=43.48 Aligned_cols=35 Identities=31% Similarity=0.479 Sum_probs=31.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 220 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~ 220 (371)
.+.+|+|+|.|++|..++..+-..|.++++.++.+
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D 63 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMD 63 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 45789999999999999999999998899999865
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.072 Score=48.37 Aligned_cols=79 Identities=24% Similarity=0.350 Sum_probs=49.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc---CCcE-Ee--cCCCCCchHHHHHHhhc--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF---GVTE-FV--NPKDHDKPIQQVLVDLT--DG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~---g~~~-vi--~~~~~~~~~~~~~~~~~--~g 255 (371)
+++++||+|+ |.+|...+..+...|+ +|++++++.++.+.+ .++ +... .+ |..+ .....+.+.... .+
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~g 82 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSD-AAQVEALADAALERFG 82 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 3578999988 9999999988888999 888888876554332 222 3322 12 2222 122222222221 13
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|+++++.|.
T Consensus 83 ~id~vi~~Ag~ 93 (287)
T PRK06194 83 AVHLLFNNAGV 93 (287)
T ss_pred CCCEEEECCCC
Confidence 68999998875
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.083 Score=47.05 Aligned_cols=79 Identities=22% Similarity=0.260 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc---CCcE---EecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF---GVTE---FVNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~---g~~~---vi~~~~~~~~~~~~~~~~~~--g 255 (371)
+++++||+|+ |.+|.+.+..+...|+ +|+.+++++++.+.+. ++ +... ..|..+ .......+.+... +
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 81 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITD-EDQCANLVALALERFG 81 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCC-HHHHHHHHHHHHHHcC
Confidence 5789999988 9999999998889999 8999988876544332 22 3221 223322 1223333333221 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
.+|+++++.|.
T Consensus 82 ~~d~vi~~ag~ 92 (258)
T PRK07890 82 RVDALVNNAFR 92 (258)
T ss_pred CccEEEECCcc
Confidence 68999998864
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.19 Score=44.94 Aligned_cols=103 Identities=20% Similarity=0.303 Sum_probs=60.9
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCh---hhHH-HHHhc-CCc-E--EecCCCCCchHHHHHHhhcC
Q 017431 186 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDP---KKFD-RAKNF-GVT-E--FVNPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 186 ~g~~VlI~Ga---g~vG~~ai~la~~~g~~~v~~v~~~~---~~~~-~~~~~-g~~-~--vi~~~~~~~~~~~~~~~~~~ 254 (371)
.++++||+|+ +++|.+.++.+...|+ +|+.+.+++ ++.+ +..++ +.. . ..|..+ .......+.+...
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~ 83 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTS-DEEITACFETIKE 83 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCC-HHHHHHHHHHHHH
Confidence 4789999987 4899998888888999 788876543 2222 33333 211 1 123333 1223333333322
Q ss_pred --CCccEEEEccCCH-------H----------------------HHHHHHHHhccCCceEEEEccCC
Q 017431 255 --GGVDYSFECIGNV-------S----------------------VMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 255 --gg~dvvid~~g~~-------~----------------------~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
+++|+++++.|.. . ..+.++..|.++ |+||.+++..
T Consensus 84 ~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~Iv~isS~~ 150 (257)
T PRK08594 84 EVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEG-GSIVTLTYLG 150 (257)
T ss_pred hCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccC-ceEEEEcccC
Confidence 4799999887621 0 123445566775 9999887643
|
|
| >PLN02476 O-methyltransferase | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.13 Score=46.51 Aligned_cols=105 Identities=17% Similarity=0.169 Sum_probs=67.6
Q ss_pred hhcCCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHH----hcCCcEEecCCCCCchHHHHHHhhc
Q 017431 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 179 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~v~~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~ 253 (371)
....+..+.++||=+|++ +|..++.+|+.++ -.+|++++.+++..+.++ +.|...-+.... .+..+.+.++.
T Consensus 111 ~~L~~~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~--GdA~e~L~~l~ 187 (278)
T PLN02476 111 AMLVQILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKH--GLAAESLKSMI 187 (278)
T ss_pred HHHHHhcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--cCHHHHHHHHH
Confidence 344556678899999874 5777778888774 237999999998877664 456542221111 23334444331
Q ss_pred ----CCCccEEEEccCC---HHHHHHHHHHhccCCceEEEE
Q 017431 254 ----DGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 254 ----~gg~dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~ 287 (371)
.+.||+||--... +..++.+++.|++| |.++.=
T Consensus 188 ~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~D 227 (278)
T PLN02476 188 QNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVMD 227 (278)
T ss_pred hcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEe
Confidence 2379988843333 35588999999996 887743
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.045 Score=49.26 Aligned_cols=77 Identities=26% Similarity=0.349 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE-EecCCCCCchHHHHHHhhcC--CCccEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTD--GGVDYSF 261 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~~~~~~~~--gg~dvvi 261 (371)
.+++++|+|+ |.+|...++.+...|+ +|++++++.++.+.. .+... ..|..+ ...+.+.+.+... +.+|+++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~--~~~~~~~~D~~d-~~~~~~~~~~~~~~~g~~d~li 78 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPI--PGVELLELDVTD-DASVQAAVDEVIARAGRIDVLV 78 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccc--CCCeeEEeecCC-HHHHHHHHHHHHHhCCCCCEEE
Confidence 3568999988 9999998888888899 899988876654322 12221 223333 2333444443322 3799999
Q ss_pred EccCC
Q 017431 262 ECIGN 266 (371)
Q Consensus 262 d~~g~ 266 (371)
++.|.
T Consensus 79 ~~ag~ 83 (270)
T PRK06179 79 NNAGV 83 (270)
T ss_pred ECCCC
Confidence 99884
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.082 Score=47.12 Aligned_cols=79 Identities=22% Similarity=0.273 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCcE---EecCCCCCchHHHHHHhhcC--CCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTE---FVNPKDHDKPIQQVLVDLTD--GGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~g~~~---vi~~~~~~~~~~~~~~~~~~--gg~d 258 (371)
.|+++||+|+ |.+|...+..+...|+ +|+.++++.++.+ ..++++... ..|..+ .......+.+... +.+|
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~id 86 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVAD-EAQVAAGVAEVLGQFGRLD 86 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4689999987 9999999888888899 8888877765443 334444322 122222 1222222333222 3689
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
+++++.|.
T Consensus 87 ~li~~ag~ 94 (255)
T PRK05717 87 ALVCNAAI 94 (255)
T ss_pred EEEECCCc
Confidence 99998874
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.11 Score=48.53 Aligned_cols=36 Identities=31% Similarity=0.332 Sum_probs=32.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
.+.+|+|+|+|++|..++..+..+|.++++.++.+.
T Consensus 23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 457899999999999999999999998999998864
|
|
| >PLN02781 Probable caffeoyl-CoA O-methyltransferase | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.11 Score=45.86 Aligned_cols=104 Identities=20% Similarity=0.215 Sum_probs=66.1
Q ss_pred hcCCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----cCCcEEecCCCCCchHHHHHHhhc-
Q 017431 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT- 253 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~v~~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~- 253 (371)
...+..+.++||=+|+| .|..++.+++.++ ..+|++++.+++..+.+++ .|...-+.... .+..+.+.++.
T Consensus 62 ~l~~~~~~~~vLEiGt~-~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~--gda~~~L~~l~~ 138 (234)
T PLN02781 62 MLVKIMNAKNTLEIGVF-TGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQ--SDALSALDQLLN 138 (234)
T ss_pred HHHHHhCCCEEEEecCc-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--ccHHHHHHHHHh
Confidence 44556678899988874 5666777777764 4499999999987776654 45432111111 23333344332
Q ss_pred ---CCCccEEEEccC---CHHHHHHHHHHhccCCceEEEE
Q 017431 254 ---DGGVDYSFECIG---NVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 254 ---~gg~dvvid~~g---~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
.+.||+||--.. -...++.+++.+++| |.++.-
T Consensus 139 ~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~d 177 (234)
T PLN02781 139 NDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAFD 177 (234)
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEEE
Confidence 237999884432 235688899999996 887653
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.076 Score=47.28 Aligned_cols=79 Identities=19% Similarity=0.318 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh--HHHHHhcCCcE---EecCCCCCchHHHHHHhhc--CCCc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK--FDRAKNFGVTE---FVNPKDHDKPIQQVLVDLT--DGGV 257 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~--~~~~~~~g~~~---vi~~~~~~~~~~~~~~~~~--~gg~ 257 (371)
+++++||+|+ +++|.+.++.+...|+ +|+++++++.. .+.+++.+... ..|..+ ..+..+.+.+.. -+++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~i 84 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQ-QKDIDSIVSQAVEVMGHI 84 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCC-HHHHHHHHHHHHHHcCCC
Confidence 5789999988 9999999998888999 78877665421 22334444322 133333 123333333322 1379
Q ss_pred cEEEEccCC
Q 017431 258 DYSFECIGN 266 (371)
Q Consensus 258 dvvid~~g~ 266 (371)
|+++++.|.
T Consensus 85 D~lv~~ag~ 93 (251)
T PRK12481 85 DILINNAGI 93 (251)
T ss_pred CEEEECCCc
Confidence 999998874
|
|
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.53 Score=44.95 Aligned_cols=79 Identities=20% Similarity=0.228 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE--ec-CCCCCchHHHHHHhhcCC-CccEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF--VN-PKDHDKPIQQVLVDLTDG-GVDYS 260 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v--i~-~~~~~~~~~~~~~~~~~g-g~dvv 260 (371)
...+|||+|+ .+.|+..+..++..|. +|+++++.+.......+ .++.. +. +......+.+.+.++... ++|++
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~s~-~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v 80 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRFSR-AVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL 80 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHH-hhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence 4589999998 5689999999999999 89999887654332111 12222 21 222224567777776666 89999
Q ss_pred EEccCC
Q 017431 261 FECIGN 266 (371)
Q Consensus 261 id~~g~ 266 (371)
+-+...
T Consensus 81 IP~~e~ 86 (389)
T PRK06849 81 IPTCEE 86 (389)
T ss_pred EECChH
Confidence 987654
|
|
| >PRK04457 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.2 Score=45.10 Aligned_cols=95 Identities=13% Similarity=0.143 Sum_probs=64.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc-CCc----E--EecCCCCCchHHHHHHhhcCCCc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-GVT----E--FVNPKDHDKPIQQVLVDLTDGGV 257 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~-g~~----~--vi~~~~~~~~~~~~~~~~~~gg~ 257 (371)
.++++||++|.|+ |..+..+++.....++++++.+++-.+.++++ +.. . ++. .+..+.+.+. .+.+
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~-----~Da~~~l~~~-~~~y 137 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIE-----ADGAEYIAVH-RHST 137 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEE-----CCHHHHHHhC-CCCC
Confidence 3567899999863 77788888877544899999999988888763 321 1 121 2333334332 3479
Q ss_pred cEEE-EccCC---------HHHHHHHHHHhccCCceEEEE
Q 017431 258 DYSF-ECIGN---------VSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 258 dvvi-d~~g~---------~~~~~~~~~~l~~~~G~iv~~ 287 (371)
|+|+ |...+ .+.++.+.+.|+++ |.++..
T Consensus 138 D~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvin 176 (262)
T PRK04457 138 DVILVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVVN 176 (262)
T ss_pred CEEEEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEEE
Confidence 9887 43221 46789999999997 998863
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.082 Score=46.98 Aligned_cols=79 Identities=24% Similarity=0.360 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcE-E--ecCCCCCchHHHHHHhhc--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLT--DG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~~~~~~--~g 255 (371)
+++++||+|+ |.+|...+..+...|+ +|+.+++++++.+.+ ++.+... . .|..+ .......+.+.. .+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g 83 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTR-DAEVKALVEQTIAAYG 83 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence 4689999988 9999998888888899 799998887654322 3334322 1 22222 122222222221 13
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|+++++.|.
T Consensus 84 ~id~li~~ag~ 94 (253)
T PRK06172 84 RLDYAFNNAGI 94 (253)
T ss_pred CCCEEEECCCC
Confidence 78999998874
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.068 Score=47.74 Aligned_cols=78 Identities=26% Similarity=0.319 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh---cCCcE---EecCCCCCchHHHHHHhhcC--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN---FGVTE---FVNPKDHDKPIQQVLVDLTD--GG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~---~g~~~---vi~~~~~~~~~~~~~~~~~~--gg 256 (371)
+++++||+|+ |.+|.+.++.+...|+ +|+.+++++...+..++ .+... ..|..+ .....+.+.+... ++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 84 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLET-YAGAQAAMAAAVEAFGR 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCC-HHHHHHHHHHHHHHcCC
Confidence 4689999988 9999999998888999 88888887543333333 33322 123333 1222333333221 37
Q ss_pred ccEEEEccC
Q 017431 257 VDYSFECIG 265 (371)
Q Consensus 257 ~dvvid~~g 265 (371)
+|++++++|
T Consensus 85 id~lv~nAg 93 (260)
T PRK12823 85 IDVLINNVG 93 (260)
T ss_pred CeEEEECCc
Confidence 999999886
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.09 Score=47.62 Aligned_cols=79 Identities=24% Similarity=0.310 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-H---hcCCcEE---ecCCCCCchHHHHHHhhc--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-K---NFGVTEF---VNPKDHDKPIQQVLVDLT--DG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~---~~g~~~v---i~~~~~~~~~~~~~~~~~--~g 255 (371)
+++++||+|+ |++|.+.+..+...|+ +|+.+++++++.+.+ + +.+.... .|..+ ..+..+.+.+.. -+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 82 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRH-REEVTHLADEAFRLLG 82 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHHHHHHHcC
Confidence 4789999987 9999999988888999 788888877654422 2 2343221 23222 122222222221 13
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
.+|+++++.|.
T Consensus 83 ~id~li~nAg~ 93 (275)
T PRK05876 83 HVDVVFSNAGI 93 (275)
T ss_pred CCCEEEECCCc
Confidence 68999998873
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.11 Score=45.76 Aligned_cols=79 Identities=16% Similarity=0.185 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcE-E--ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~-v--i~~~~~~~~~~~~~~~~~~--g 255 (371)
+++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+. +.+... . .|..+ .......+.+... +
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 82 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSN-PEAIAPGIAELLEQFG 82 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4578999987 9999999999988999 8999988876554332 222221 1 23222 1222233333221 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
+.|+++++.|.
T Consensus 83 ~id~lv~~ag~ 93 (241)
T PRK07454 83 CPDVLINNAGM 93 (241)
T ss_pred CCCEEEECCCc
Confidence 69999998874
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.096 Score=47.32 Aligned_cols=78 Identities=19% Similarity=0.272 Sum_probs=48.6
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEEcCChhhH----HHHHhcCCcEE--ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGLG---TVGLAVAEGAKAAGASRVIGIDIDPKKF----DRAKNFGVTEF--VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Gag---~vG~~ai~la~~~g~~~v~~v~~~~~~~----~~~~~~g~~~v--i~~~~~~~~~~~~~~~~~~-- 254 (371)
+++++||+|++ ++|.+.++.+...|+ +|+.+.++++.. ++.+++|.... .|..+ ..+....+.+...
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 83 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVED-IASVDAVFEALEKKW 83 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCC-HHHHHHHHHHHHHHh
Confidence 57899999884 899998888888999 888887765322 22234453322 23333 1222223333222
Q ss_pred CCccEEEEccC
Q 017431 255 GGVDYSFECIG 265 (371)
Q Consensus 255 gg~dvvid~~g 265 (371)
+.+|+++++.|
T Consensus 84 g~iD~lVnnAG 94 (271)
T PRK06505 84 GKLDFVVHAIG 94 (271)
T ss_pred CCCCEEEECCc
Confidence 47999999887
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.095 Score=46.80 Aligned_cols=79 Identities=25% Similarity=0.404 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcE-E--ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~-v--i~~~~~~~~~~~~~~~~~~--g 255 (371)
+++++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+. +.+... . .|..+ ...+...+.+... +
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d-~~~i~~~~~~~~~~~~ 88 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVAD-EADIERLAEETLERFG 88 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 4689999987 9999999988888999 8999988877654332 223221 1 23332 1223222222221 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|.++.+.|.
T Consensus 89 ~id~vi~~ag~ 99 (259)
T PRK08213 89 HVDILVNNAGA 99 (259)
T ss_pred CCCEEEECCCC
Confidence 68999998874
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.091 Score=46.72 Aligned_cols=78 Identities=21% Similarity=0.309 Sum_probs=49.8
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcE-Ee--cCCCCCchHHHHHHhhcC--CC
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLVDLTD--GG 256 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~-vi--~~~~~~~~~~~~~~~~~~--gg 256 (371)
|+++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +.+... .+ |..+ .....+.+.+... +.
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 78 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRN-PEDVQKMVEQIDEKFGR 78 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHhCC
Confidence 478999988 8999999999999999 8999988876554332 223221 22 3222 1223333333221 36
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|+++++.|.
T Consensus 79 id~lI~~ag~ 88 (252)
T PRK07677 79 IDALINNAAG 88 (252)
T ss_pred ccEEEECCCC
Confidence 8999998873
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.13 Score=45.80 Aligned_cols=73 Identities=21% Similarity=0.315 Sum_probs=46.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHHhcCCcEE--ecCCCCCchHHHHHHhhcCCCccEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKFDRAKNFGVTEF--VNPKDHDKPIQQVLVDLTDGGVDYSF 261 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~-~~~~~~~~~g~~~v--i~~~~~~~~~~~~~~~~~~gg~dvvi 261 (371)
.++++||+|+ |++|.+.++.+...|+ +|+++++++ +..+.... +.... .|..+ . +.+.+.. +++|+++
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~--~---~~~~~~~-~~iDilV 84 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESNDE-SPNEWIKWECGK--E---ESLDKQL-ASLDVLI 84 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhcc-CCCeEEEeeCCC--H---HHHHHhc-CCCCEEE
Confidence 3689999988 8999999998888999 888887765 22222111 11122 23222 1 1233322 3699999
Q ss_pred EccCC
Q 017431 262 ECIGN 266 (371)
Q Consensus 262 d~~g~ 266 (371)
+++|.
T Consensus 85 nnAG~ 89 (245)
T PRK12367 85 LNHGI 89 (245)
T ss_pred ECCcc
Confidence 99874
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.076 Score=46.69 Aligned_cols=75 Identities=23% Similarity=0.276 Sum_probs=48.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCc-EE--ecCCCCCchHHHHHHhhcCCCccEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EF--VNPKDHDKPIQQVLVDLTDGGVDYSF 261 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~-~v--i~~~~~~~~~~~~~~~~~~gg~dvvi 261 (371)
.++++||+|+ |.+|.+.++.+...|+++|++++++.++.+. .+.. .+ .|..+ ...+.+.+... +.+|++|
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~-~~~~~~~~~~~--~~id~vi 78 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTD-PASVAAAAEAA--SDVTILV 78 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCC-HHHHHHHHHhc--CCCCEEE
Confidence 4578999987 9999999999988998678888887765432 2221 11 22222 12222222221 2589999
Q ss_pred EccCC
Q 017431 262 ECIGN 266 (371)
Q Consensus 262 d~~g~ 266 (371)
++.|.
T Consensus 79 ~~ag~ 83 (238)
T PRK08264 79 NNAGI 83 (238)
T ss_pred ECCCc
Confidence 98876
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.098 Score=46.63 Aligned_cols=102 Identities=19% Similarity=0.278 Sum_probs=62.6
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE--E--ecCCCCCchHHHHHHhhcC--CC
Q 017431 186 PGSIVAVFGLG---TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--F--VNPKDHDKPIQQVLVDLTD--GG 256 (371)
Q Consensus 186 ~g~~VlI~Gag---~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~--v--i~~~~~~~~~~~~~~~~~~--gg 256 (371)
.|+++||+|++ ++|.+.++.+...|+ +|+.+.++++..+.++++.... . .|..+ ..+..+.+.+... +.
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g~ 83 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVAS-DESIERAFATIKERVGK 83 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCC-HHHHHHHHHHHHHHhCC
Confidence 57899999874 899998888888899 8888877754444444442211 1 23222 1222233333221 47
Q ss_pred ccEEEEccCCH-----------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 257 VDYSFECIGNV-----------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 257 ~dvvid~~g~~-----------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+|+++++.|.. .+.+.++..|.++ |+++.+++.
T Consensus 84 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~-g~Iv~iss~ 145 (252)
T PRK06079 84 IDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPG-ASIVTLTYF 145 (252)
T ss_pred CCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccC-ceEEEEecc
Confidence 99999987631 0134445667775 899888764
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.14 Score=44.78 Aligned_cols=74 Identities=19% Similarity=0.233 Sum_probs=47.8
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEE-ecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 189 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 189 ~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~v-i~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
+++|+|+ |.+|.+.++.+...|+ +|+.+++++++.+.+ ++++...+ .|..+ .....+.+.+. .+.+|+++++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~-~~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTD-PASLEEARGLF-PHHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCC-HHHHHHHHHHH-hhcCcEEEECCC
Confidence 5899988 9999999998888899 888888887766533 44444322 23332 12222222222 236899998764
|
|
| >PLN03075 nicotianamine synthase; Provisional | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.12 Score=47.03 Aligned_cols=95 Identities=21% Similarity=0.171 Sum_probs=65.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhcC-----CcEEecCCCCCchHHHHHHhhc--CCCc
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNFG-----VTEFVNPKDHDKPIQQVLVDLT--DGGV 257 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g-~~~v~~v~~~~~~~~~~~~~g-----~~~vi~~~~~~~~~~~~~~~~~--~gg~ 257 (371)
++++|+-+|+|+.++.++.+++.+. -.+++.++.+++..+.+++.- ...-+.... .+.. +.. .++|
T Consensus 123 ~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~--~Da~----~~~~~l~~F 196 (296)
T PLN03075 123 VPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT--ADVM----DVTESLKEY 196 (296)
T ss_pred CCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE--Cchh----hcccccCCc
Confidence 7789999999999999998887654 338999999999888877543 212111111 1111 112 1379
Q ss_pred cEEEEcc-------CCHHHHHHHHHHhccCCceEEEE
Q 017431 258 DYSFECI-------GNVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 258 dvvid~~-------g~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
|+||..+ .....++...+.|++| |.++.=
T Consensus 197 DlVF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr 232 (296)
T PLN03075 197 DVVFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLR 232 (296)
T ss_pred CEEEEecccccccccHHHHHHHHHHhcCCC-cEEEEe
Confidence 9999765 2245689999999996 887744
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.12 Score=46.65 Aligned_cols=79 Identities=24% Similarity=0.288 Sum_probs=57.1
Q ss_pred CCCCEEEEEcC-ChHHHH-HHHHHHHcCCCeEEEEcCChhhHHHHH-----hcCC---cEEecCCCCCchHHHHHHhhcC
Q 017431 185 EPGSIVAVFGL-GTVGLA-VAEGAKAAGASRVIGIDIDPKKFDRAK-----NFGV---TEFVNPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~-ai~la~~~g~~~v~~v~~~~~~~~~~~-----~~g~---~~vi~~~~~~~~~~~~~~~~~~ 254 (371)
+-|++.+|+|| .++|.+ |-++|+ .|. +|+.+.|+.+|++..+ +.++ ..++|..+.+..+ +.+++...
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~y-e~i~~~l~ 123 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVY-EKLLEKLA 123 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhH-HHHHHHhc
Confidence 44689999998 789987 777777 899 8999999999987653 3443 1246766644434 44555555
Q ss_pred C-CccEEEEccCC
Q 017431 255 G-GVDYSFECIGN 266 (371)
Q Consensus 255 g-g~dvvid~~g~ 266 (371)
+ .+-+.+|++|.
T Consensus 124 ~~~VgILVNNvG~ 136 (312)
T KOG1014|consen 124 GLDVGILVNNVGM 136 (312)
T ss_pred CCceEEEEecccc
Confidence 5 88899999886
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.049 Score=44.92 Aligned_cols=78 Identities=21% Similarity=0.225 Sum_probs=47.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC--hhhHH-HH---HhcCCcEE-e--cCCCCCchHHHHHHhhc--CC
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID--PKKFD-RA---KNFGVTEF-V--NPKDHDKPIQQVLVDLT--DG 255 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~--~~~~~-~~---~~~g~~~v-i--~~~~~~~~~~~~~~~~~--~g 255 (371)
+++||+|+ +++|.+.++.+-..|..+|+.+.++ .++.+ ++ +..+.... + |..+ ..+....+.+.. .+
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 79 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSD-PESIRALIEEVIKRFG 79 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTS-HHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccc-cccccccccccccccc
Confidence 47899988 9999998887777787688888888 33333 32 33443222 2 2222 123333333333 23
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
.+|++|++.|.
T Consensus 80 ~ld~li~~ag~ 90 (167)
T PF00106_consen 80 PLDILINNAGI 90 (167)
T ss_dssp SESEEEEECSC
T ss_pred ccccccccccc
Confidence 79999998886
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.077 Score=47.18 Aligned_cols=75 Identities=24% Similarity=0.345 Sum_probs=47.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCc-EE--ecCCCCCchHHHHHHhhcC--CCccE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EF--VNPKDHDKPIQQVLVDLTD--GGVDY 259 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~-~v--i~~~~~~~~~~~~~~~~~~--gg~dv 259 (371)
.++++||+|+ |++|.+.++.+...|+ +|+.+++++++ ...+.. .. .|..+ .....+.+.+... +.+|+
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~ 78 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRD-PDQVAALVDAIVERHGRLDV 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 4789999988 9999999988888999 88888887654 112211 11 23222 1223333333221 36899
Q ss_pred EEEccCC
Q 017431 260 SFECIGN 266 (371)
Q Consensus 260 vid~~g~ 266 (371)
+|++.|.
T Consensus 79 vi~~ag~ 85 (252)
T PRK07856 79 LVNNAGG 85 (252)
T ss_pred EEECCCC
Confidence 9998873
|
|
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.12 Score=45.79 Aligned_cols=35 Identities=34% Similarity=0.484 Sum_probs=31.2
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
+.+|+|.|+|++|..+++.+..+|.++++.++.+.
T Consensus 24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 58 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT 58 (240)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 47899999999999999999999999999987654
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.2 Score=43.54 Aligned_cols=72 Identities=11% Similarity=0.126 Sum_probs=45.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCcEEe--cCCCCCchHHHHHHhhcCC--CccEEE
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFV--NPKDHDKPIQQVLVDLTDG--GVDYSF 261 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~-~g~~~vi--~~~~~~~~~~~~~~~~~~g--g~dvvi 261 (371)
+++||+|+ |.+|...+..+... + +|++++++.++.+.+.+ ....+++ |..+ . +.+.+.... +.|.++
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~---~~~~~~~~~~~~id~vi 76 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDLTD--P---EAIAAAVEQLGRLDVLV 76 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCCCC--H---HHHHHHHHhcCCCCEEE
Confidence 58999988 99999888777666 6 79999888776554432 2111222 2222 1 223332222 699999
Q ss_pred EccCC
Q 017431 262 ECIGN 266 (371)
Q Consensus 262 d~~g~ 266 (371)
++.|.
T Consensus 77 ~~ag~ 81 (227)
T PRK08219 77 HNAGV 81 (227)
T ss_pred ECCCc
Confidence 98874
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.089 Score=46.62 Aligned_cols=79 Identities=22% Similarity=0.250 Sum_probs=48.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc--CCc-EE--ecCCCCCchHHHHHHhhcC--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF--GVT-EF--VNPKDHDKPIQQVLVDLTD--GG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~--g~~-~v--i~~~~~~~~~~~~~~~~~~--gg 256 (371)
+++++||+|+ |.+|...++.+...|+ +|+.+.++.++.+.. .++ +.. .. .|..+ .....+.+.+... ++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~ 81 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGS-AEAVEALVDFVAARWGR 81 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence 4679999988 9999998888878899 888888877654332 222 221 12 22222 1222222222211 37
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|+++++.|.
T Consensus 82 id~vi~~ag~ 91 (252)
T PRK06138 82 LDVLVNNAGF 91 (252)
T ss_pred CCEEEECCCC
Confidence 9999998884
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.092 Score=46.89 Aligned_cols=77 Identities=21% Similarity=0.325 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h----cCCcE-E--ecCCCCCchHHHHHHhhcCCC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N----FGVTE-F--VNPKDHDKPIQQVLVDLTDGG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~----~g~~~-v--i~~~~~~~~~~~~~~~~~~gg 256 (371)
+++++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+. + .+... . .|..+ .......+.. . +.
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~-~-g~ 81 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSS-PEAREQLAAE-A-GD 81 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC-HHHHHHHHHH-h-CC
Confidence 4789999988 8999999988888999 8999988876554322 1 23221 2 22222 1222222222 1 47
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|+++++.|.
T Consensus 82 id~lv~~ag~ 91 (259)
T PRK06125 82 IDILVNNAGA 91 (259)
T ss_pred CCEEEECCCC
Confidence 9999998874
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.1 Score=47.06 Aligned_cols=77 Identities=21% Similarity=0.260 Sum_probs=49.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCcE---EecCCCCCchHHHHHHhhcC--CCccEE
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTE---FVNPKDHDKPIQQVLVDLTD--GGVDYS 260 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~-~g~~~---vi~~~~~~~~~~~~~~~~~~--gg~dvv 260 (371)
+++||+|+ |.+|...++.+...|+ +|+++.+++++.+.+++ .+... ..|..+ .......+.+... +++|++
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~v 80 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTD-SAAVRAVVDRAFAALGRIDVV 80 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 57999987 9999998888888899 89999888876655443 22211 123332 1223333333221 378999
Q ss_pred EEccCC
Q 017431 261 FECIGN 266 (371)
Q Consensus 261 id~~g~ 266 (371)
|+++|.
T Consensus 81 i~~ag~ 86 (276)
T PRK06482 81 VSNAGY 86 (276)
T ss_pred EECCCC
Confidence 998874
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.15 Score=44.71 Aligned_cols=78 Identities=13% Similarity=0.141 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcE-E--ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~~~~~~~--g 255 (371)
+++++||+|+ +++|.+.+.-+...|+ +|+.+.+++++.+.+ ++.+... . .|..+ .....+.+.+... +
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 81 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFS-QESIRHLFDAIEQQFN 81 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 4689999988 8999998888888899 888888887765432 2334322 1 22222 1223222322221 3
Q ss_pred -CccEEEEccC
Q 017431 256 -GVDYSFECIG 265 (371)
Q Consensus 256 -g~dvvid~~g 265 (371)
.+|+++++.|
T Consensus 82 ~~iD~li~nag 92 (227)
T PRK08862 82 RAPDVLVNNWT 92 (227)
T ss_pred CCCCEEEECCc
Confidence 6999999886
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.11 Score=46.50 Aligned_cols=79 Identities=23% Similarity=0.286 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc-----CCcE-E--ecCCCCCchHHHHHHhhc--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF-----GVTE-F--VNPKDHDKPIQQVLVDLT-- 253 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~-----g~~~-v--i~~~~~~~~~~~~~~~~~-- 253 (371)
.++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ +++ +... . .|..+ ..+....+.+..
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 83 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTD-AASVAAAVAAAEEA 83 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 4689999988 9999999998889999 888888877655433 222 2211 1 23222 122333333322
Q ss_pred CCCccEEEEccCC
Q 017431 254 DGGVDYSFECIGN 266 (371)
Q Consensus 254 ~gg~dvvid~~g~ 266 (371)
.+.+|+++++.|.
T Consensus 84 ~g~id~li~~ag~ 96 (260)
T PRK07063 84 FGPLDVLVNNAGI 96 (260)
T ss_pred hCCCcEEEECCCc
Confidence 1379999998873
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.099 Score=46.41 Aligned_cols=78 Identities=21% Similarity=0.234 Sum_probs=49.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh---cCCc-EE--ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN---FGVT-EF--VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~---~g~~-~v--i~~~~~~~~~~~~~~~~~~--g 255 (371)
+++++||+|+ |.+|.+.++.+...|+ +|+.++++.++.+.+ ++ .+.. .. .|..+ .......+.+... +
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 84 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGE-MEQIDALFAHIRERHG 84 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 4578999988 9999999999999999 899998877654432 22 2322 11 22222 1222223333222 3
Q ss_pred CccEEEEccC
Q 017431 256 GVDYSFECIG 265 (371)
Q Consensus 256 g~dvvid~~g 265 (371)
.+|+++++.+
T Consensus 85 ~id~li~~ag 94 (252)
T PRK07035 85 RLDILVNNAA 94 (252)
T ss_pred CCCEEEECCC
Confidence 6899998887
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.11 Score=46.51 Aligned_cols=78 Identities=19% Similarity=0.331 Sum_probs=49.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhcC--CC
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLTD--GG 256 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~~--gg 256 (371)
+.+|||+|+ |.+|...++.+...|+ +|+++++++++.+.+ +..+.... .|..+ ...+...+.+... ++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSD-AEACERLIEAAVARFGG 78 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcCC
Confidence 357999988 9999999999889999 899998887654322 22333221 22222 1223333333221 36
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|+++++.|.
T Consensus 79 id~vi~~ag~ 88 (263)
T PRK06181 79 IDILVNNAGI 88 (263)
T ss_pred CCEEEECCCc
Confidence 8999998874
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.31 Score=44.10 Aligned_cols=100 Identities=22% Similarity=0.323 Sum_probs=59.8
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-H---hcCCcE-E--ecCCCCCchHHHHHHhhc-CCCcc
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-K---NFGVTE-F--VNPKDHDKPIQQVLVDLT-DGGVD 258 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~---~~g~~~-v--i~~~~~~~~~~~~~~~~~-~gg~d 258 (371)
++++||+|+|++|.+.+..+. .|+ +|+.+++++++.+.+ + +.+... . .|..+ .......+.+.. .+++|
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~i~~~~~~~~~~g~id 78 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS-RESVKALAATAQTLGPVT 78 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC-HHHHHHHHHHHHhcCCCC
Confidence 357889999999999888774 798 888888877654322 2 223221 1 23333 122333333221 24799
Q ss_pred EEEEccCCH------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 259 YSFECIGNV------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 259 vvid~~g~~------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
++++++|.. .+++.+...+..+ |+++.+++.
T Consensus 79 ~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-g~iv~isS~ 127 (275)
T PRK06940 79 GLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPG-GAGVVIASQ 127 (275)
T ss_pred EEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhC-CCEEEEEec
Confidence 999988741 1244455566665 777777653
|
|
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.13 Score=48.06 Aligned_cols=36 Identities=33% Similarity=0.362 Sum_probs=31.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
...+|+|+|+|++|..+++.+...|.++++.++.+.
T Consensus 23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (339)
T PRK07688 23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRDY 58 (339)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence 347899999999999999999999999999998763
|
|
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.13 Score=44.60 Aligned_cols=35 Identities=23% Similarity=0.364 Sum_probs=31.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 220 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~ 220 (371)
+..+|+|+|+|++|...++.+...|..+++.+|.+
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 44689999999999999999999999889999877
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.12 Score=47.75 Aligned_cols=39 Identities=33% Similarity=0.312 Sum_probs=32.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD 225 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~ 225 (371)
+|++++|+|+ +++|.+.+..+...|+ +|+.+.+++++.+
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~ 52 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGE 52 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHH
Confidence 4689999988 9999998888888899 8888888876543
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.11 Score=46.52 Aligned_cols=79 Identities=20% Similarity=0.274 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh---cCCcE-E--ecCCCCCchHHHHHHhhcC--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN---FGVTE-F--VNPKDHDKPIQQVLVDLTD--GG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~---~g~~~-v--i~~~~~~~~~~~~~~~~~~--gg 256 (371)
+++++||+|+ |.+|.+.+..+...|+ +|+.++++++..+.+++ .+... . .|..+ ..+....+.+... +.
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~~ 82 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRD-PASVAAAIKRAKEKEGR 82 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence 4689999988 9999999998888999 79998887654433332 23221 1 22222 1222222332221 36
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|+++++.|.
T Consensus 83 id~vi~~ag~ 92 (263)
T PRK08226 83 IDILVNNAGV 92 (263)
T ss_pred CCEEEECCCc
Confidence 8999998873
|
|
| >PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.026 Score=48.72 Aligned_cols=101 Identities=21% Similarity=0.307 Sum_probs=63.9
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----cCCcEEecCCCCCchHHHHHHhhcC----
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTD---- 254 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~v~~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~---- 254 (371)
....++||-+|++ +|..++.+|+.+.- .+|+.++.++++.+.+++ .|...-+.... .+..+.+.++.+
T Consensus 43 ~~~~k~vLEIGt~-~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~--gda~~~l~~l~~~~~~ 119 (205)
T PF01596_consen 43 LTRPKRVLEIGTF-TGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIE--GDALEVLPELANDGEE 119 (205)
T ss_dssp HHT-SEEEEESTT-TSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEE--S-HHHHHHHHHHTTTT
T ss_pred hcCCceEEEeccc-cccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEE--eccHhhHHHHHhccCC
Confidence 3455799999885 68888899988741 299999999998777743 45432111111 233344444322
Q ss_pred CCccEEE-EccCC--HHHHHHHHHHhccCCceEEEEc
Q 017431 255 GGVDYSF-ECIGN--VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 255 gg~dvvi-d~~g~--~~~~~~~~~~l~~~~G~iv~~g 288 (371)
+.||+|| |+--. ...++.+++.|+++ |.++.=.
T Consensus 120 ~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~DN 155 (205)
T PF01596_consen 120 GQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIADN 155 (205)
T ss_dssp TSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEET
T ss_pred CceeEEEEcccccchhhHHHHHhhhccCC-eEEEEcc
Confidence 3699888 54332 24478889999996 7776443
|
The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A .... |
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.082 Score=45.44 Aligned_cols=35 Identities=37% Similarity=0.541 Sum_probs=31.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 220 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~ 220 (371)
+..+|+|+|+|++|...++.+...|.++++.++.+
T Consensus 20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 34789999999999999999989999889999887
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PRK08317 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.25 Score=43.27 Aligned_cols=102 Identities=25% Similarity=0.318 Sum_probs=67.7
Q ss_pred hhcCCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhc----CCcEEecCCCCCchHHHHHHhhc
Q 017431 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 179 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~v~~v~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~~~~~~~ 253 (371)
.+...+.++++||-+|+|. |..+..+++..+ ..++++++.+++..+.+++. +....+...+. ... ...
T Consensus 12 ~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~-~~~-----~~~ 84 (241)
T PRK08317 12 FELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDA-DGL-----PFP 84 (241)
T ss_pred HHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccc-ccC-----CCC
Confidence 4566788899999999975 888889988874 33899999999887777654 11111111110 000 112
Q ss_pred CCCccEEEEcc-----CC-HHHHHHHHHHhccCCceEEEEc
Q 017431 254 DGGVDYSFECI-----GN-VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 254 ~gg~dvvid~~-----g~-~~~~~~~~~~l~~~~G~iv~~g 288 (371)
++.+|+|+... .. ...++.+.++|+++ |.++...
T Consensus 85 ~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~ 124 (241)
T PRK08317 85 DGSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLD 124 (241)
T ss_pred CCCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEe
Confidence 23799888532 22 34689999999997 9988764
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.12 Score=46.02 Aligned_cols=79 Identities=19% Similarity=0.291 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh--HHHH---HhcCCcE-E--ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK--FDRA---KNFGVTE-F--VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~--~~~~---~~~g~~~-v--i~~~~~~~~~~~~~~~~~~-- 254 (371)
+++++||+|+ +++|.+.++.+...|+ +|+.+++++++ .+.+ ++.+... . .|..+ .....+.+.+...
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~ 84 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTS-KADLRAAVARTEAEL 84 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4689999987 8999999998888999 88888776432 2222 2334322 1 22222 1223333333221
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+.+|+++++.|.
T Consensus 85 g~id~li~~ag~ 96 (254)
T PRK06114 85 GALTLAVNAAGI 96 (254)
T ss_pred CCCCEEEECCCC
Confidence 378999998874
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.084 Score=52.10 Aligned_cols=74 Identities=15% Similarity=0.259 Sum_probs=51.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
+.+|+|+|+|.+|.+++..+...|+++|+++.++.++.+.+ .+++...+. .... .+..+.+ ..+|+||.|++
T Consensus 266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~-~~~~-~dl~~al-----~~aDVVIsAT~ 338 (519)
T PLN00203 266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEII-YKPL-DEMLACA-----AEADVVFTSTS 338 (519)
T ss_pred CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceE-eecH-hhHHHHH-----hcCCEEEEccC
Confidence 68999999999999999999999987899999998876544 455321111 1110 1111111 26999999987
Q ss_pred CH
Q 017431 266 NV 267 (371)
Q Consensus 266 ~~ 267 (371)
.+
T Consensus 339 s~ 340 (519)
T PLN00203 339 SE 340 (519)
T ss_pred CC
Confidence 64
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.16 Score=43.45 Aligned_cols=77 Identities=26% Similarity=0.286 Sum_probs=49.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc----CCcEE-ecCCCCCchHHHHHHhhcCCCc
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF----GVTEF-VNPKDHDKPIQQVLVDLTDGGV 257 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~----g~~~v-i~~~~~~~~~~~~~~~~~~gg~ 257 (371)
-++.+++|+|+ |.+|.+.+..+...|+ +|+.+.++.++.+.+. ++ +.... .+..+ ..+..+.+ .++
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~-----~~~ 98 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD-DAARAAAI-----KGA 98 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC-HHHHHHHH-----hcC
Confidence 36789999987 9999988888888888 8888888877655432 23 22211 11111 01111222 258
Q ss_pred cEEEEccCCHH
Q 017431 258 DYSFECIGNVS 268 (371)
Q Consensus 258 dvvid~~g~~~ 268 (371)
|+||.+++...
T Consensus 99 diVi~at~~g~ 109 (194)
T cd01078 99 DVVFAAGAAGV 109 (194)
T ss_pred CEEEECCCCCc
Confidence 99999887644
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.12 Score=46.59 Aligned_cols=103 Identities=17% Similarity=0.314 Sum_probs=73.5
Q ss_pred hhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCc-E--E--ecCCCCCch
Q 017431 174 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT-E--F--VNPKDHDKP 244 (371)
Q Consensus 174 a~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~-~--v--i~~~~~~~~ 244 (371)
++..+.+..++++|++||=+|+| =|.+++.+|+..|+ +|++++-++++.+.+++ .|.. . + -++.+
T Consensus 60 k~~~~~~kl~L~~G~~lLDiGCG-WG~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd---- 133 (283)
T COG2230 60 KLDLILEKLGLKPGMTLLDIGCG-WGGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRD---- 133 (283)
T ss_pred HHHHHHHhcCCCCCCEEEEeCCC-hhHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccccc----
Confidence 34456789999999999999886 36677788888899 99999999998776654 5553 1 1 12222
Q ss_pred HHHHHHhhcCCCccEEEE-----ccCC---HHHHHHHHHHhccCCceEEEEccCC
Q 017431 245 IQQVLVDLTDGGVDYSFE-----CIGN---VSVMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 245 ~~~~~~~~~~gg~dvvid-----~~g~---~~~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
.+ +.||-|+. .+|. +..+..+.+.|+++ |++.......
T Consensus 134 -------~~-e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~ 179 (283)
T COG2230 134 -------FE-EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITG 179 (283)
T ss_pred -------cc-cccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecC
Confidence 11 14776664 3443 45689999999997 9998776643
|
|
| >COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.3 Score=42.63 Aligned_cols=102 Identities=25% Similarity=0.292 Sum_probs=62.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh------hH-------------H----HHHhcCCcEEecCCCCC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK------KF-------------D----RAKNFGVTEFVNPKDHD 242 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~------~~-------------~----~~~~~g~~~vi~~~~~~ 242 (371)
+.++|+|+|.|++|-+++..+-..|.+++..++-+.= |+ + +.++.++..-+...+ +
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~-~ 107 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIN-D 107 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehH-h
Confidence 4578999999999999999999999999988865441 11 1 112222211111111 0
Q ss_pred chHHHHHHhhcCCCccEEEEccCCHHH-HHHHHHHhccCCceEEEEcc
Q 017431 243 KPIQQVLVDLTDGGVDYSFECIGNVSV-MRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 243 ~~~~~~~~~~~~gg~dvvid~~g~~~~-~~~~~~~l~~~~G~iv~~g~ 289 (371)
.-..+.+.++...++|+|+||..+-.. ...+..|.+.+ =.+|..+.
T Consensus 108 f~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~k-i~vIss~G 154 (263)
T COG1179 108 FITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNK-IPVISSMG 154 (263)
T ss_pred hhCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcC-CCEEeecc
Confidence 111223455555589999999988544 34444466664 56666654
|
|
| >PRK01581 speE spermidine synthase; Validated | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.54 Score=44.05 Aligned_cols=102 Identities=17% Similarity=0.068 Sum_probs=64.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC-cE----EecCCCC---CchHHHHHHhhcCCC
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV-TE----FVNPKDH---DKPIQQVLVDLTDGG 256 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~-~~----vi~~~~~---~~~~~~~~~~~~~gg 256 (371)
...++|||+|+| .|.++..+++..+..+|++++.+++-.++++++.. .. .++.... -.+..+.+.+ +.+.
T Consensus 149 ~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~-~~~~ 226 (374)
T PRK01581 149 IDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHVCDAKEFLSS-PSSL 226 (374)
T ss_pred CCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEECcHHHHHHh-cCCC
Confidence 345799999875 56677777777666799999999998888886310 00 0000000 0222333333 3347
Q ss_pred ccEEEEccCC-----------HHHHHHHHHHhccCCceEEEEcc
Q 017431 257 VDYSFECIGN-----------VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 257 ~dvvid~~g~-----------~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
||+||--... .+.++.+.+.|+++ |.++....
T Consensus 227 YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs~ 269 (374)
T PRK01581 227 YDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQSN 269 (374)
T ss_pred ccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence 9988843322 23678899999997 99887643
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.11 Score=46.27 Aligned_cols=78 Identities=17% Similarity=0.221 Sum_probs=49.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcE-E--ecCCCCCchHHHHHHhhc--CCC
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-F--VNPKDHDKPIQQVLVDLT--DGG 256 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~-v--i~~~~~~~~~~~~~~~~~--~gg 256 (371)
++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+. +.+... . .|..+ .....+.+.+.. .++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD-RDQVFAAVRQVVDTFGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence 578999988 9999999999888999 8988888776543332 223221 1 22222 122223233322 137
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|+++++.|.
T Consensus 80 id~vi~~ag~ 89 (256)
T PRK08643 80 LNVVVNNAGV 89 (256)
T ss_pred CCEEEECCCC
Confidence 9999998864
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.12 Score=45.98 Aligned_cols=79 Identities=22% Similarity=0.324 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHhcCCcE-E--ecCCCCCchHHHHHHhhcC--CCc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFGVTE-F--VNPKDHDKPIQQVLVDLTD--GGV 257 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~--~~~~~~~~g~~~-v--i~~~~~~~~~~~~~~~~~~--gg~ 257 (371)
+|+++||+|+ |++|.+.++.+...|+ +|+.+++.+. ..+.+++.+... . .|-.+ ..+....+.+... +.+
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~~ 86 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRK-IDGIPALLERAVAEFGHI 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhCCC
Confidence 4689999988 8999999999988999 7887765432 223333444322 1 22222 1223333333222 379
Q ss_pred cEEEEccCC
Q 017431 258 DYSFECIGN 266 (371)
Q Consensus 258 dvvid~~g~ 266 (371)
|+++++.|.
T Consensus 87 D~li~~Ag~ 95 (253)
T PRK08993 87 DILVNNAGL 95 (253)
T ss_pred CEEEECCCC
Confidence 999998874
|
|
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.38 Score=39.81 Aligned_cols=88 Identities=20% Similarity=0.265 Sum_probs=57.4
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCH
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 267 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~ 267 (371)
.+|-++|.|.+|...+.-+...|+ .|++.++++++.+.+.+.|+.. .+ +..+.+. ..|+||-|+.+.
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~-~~------s~~e~~~-----~~dvvi~~v~~~ 68 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEV-AD------SPAEAAE-----QADVVILCVPDD 68 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEE-ES------SHHHHHH-----HBSEEEE-SSSH
T ss_pred CEEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhh-hh------hhhhHhh-----cccceEeecccc
Confidence 368889999999998888888899 8999999999988887777432 21 1222222 268999988886
Q ss_pred HHHHHHHH------HhccCCceEEEEcc
Q 017431 268 SVMRAALE------CCHKGWGTSVIVGV 289 (371)
Q Consensus 268 ~~~~~~~~------~l~~~~G~iv~~g~ 289 (371)
...+..+. .+.++ ..+|.++.
T Consensus 69 ~~v~~v~~~~~i~~~l~~g-~iiid~sT 95 (163)
T PF03446_consen 69 DAVEAVLFGENILAGLRPG-KIIIDMST 95 (163)
T ss_dssp HHHHHHHHCTTHGGGS-TT-EEEEE-SS
T ss_pred hhhhhhhhhhHHhhccccc-eEEEecCC
Confidence 65555444 34453 55565544
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.13 Score=46.46 Aligned_cols=91 Identities=20% Similarity=0.153 Sum_probs=57.1
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCC---cEEecCCCCCchHHHHHHhhcCCCccE
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGV---TEFVNPKDHDKPIQQVLVDLTDGGVDY 259 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~g~---~~vi~~~~~~~~~~~~~~~~~~gg~dv 259 (371)
..++++++|+|+|++|.+.+..+...|+ +|+++++++++.+ +++++.. ...+. ..+ .....+|+
T Consensus 114 ~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~-------~~~----~~~~~~Di 181 (270)
T TIGR00507 114 LRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFS-------MDE----LPLHRVDL 181 (270)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEec-------hhh----hcccCccE
Confidence 3557899999999999998888888898 8999888877654 4444322 11111 111 11126899
Q ss_pred EEEccCCHH--HH---HHHHHHhccCCceEEEE
Q 017431 260 SFECIGNVS--VM---RAALECCHKGWGTSVIV 287 (371)
Q Consensus 260 vid~~g~~~--~~---~~~~~~l~~~~G~iv~~ 287 (371)
+++|++... .. ......++++ ..++++
T Consensus 182 vInatp~gm~~~~~~~~~~~~~l~~~-~~v~D~ 213 (270)
T TIGR00507 182 IINATSAGMSGNIDEPPVPAEKLKEG-MVVYDM 213 (270)
T ss_pred EEECCCCCCCCCCCCCCCCHHHcCCC-CEEEEe
Confidence 999988621 01 1123446664 666666
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.11 Score=53.34 Aligned_cols=76 Identities=25% Similarity=0.347 Sum_probs=51.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh---------------------hHHHHHhcCCcEEecCCC-CC
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK---------------------KFDRAKNFGVTEFVNPKD-HD 242 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~---------------------~~~~~~~~g~~~vi~~~~-~~ 242 (371)
..+++|+|+|+|+.|++++..+..+|+ +|++++..+. ..+.++++|++...+..- .+
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD 403 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence 368899999999999999999999999 7888876542 345566777644332211 00
Q ss_pred chHHHHHHhhcCCCccEEEEccCC
Q 017431 243 KPIQQVLVDLTDGGVDYSFECIGN 266 (371)
Q Consensus 243 ~~~~~~~~~~~~gg~dvvid~~g~ 266 (371)
....+ +. .++|.+|.++|.
T Consensus 404 i~~~~-~~----~~~DavilAtGa 422 (654)
T PRK12769 404 ISLES-LL----EDYDAVFVGVGT 422 (654)
T ss_pred CCHHH-HH----hcCCEEEEeCCC
Confidence 11111 11 269999988886
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.11 Score=46.25 Aligned_cols=79 Identities=20% Similarity=0.238 Sum_probs=48.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH---HHHhcCCcE-E--ecCCCCCchHHHHHHhhcC--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD---RAKNFGVTE-F--VNPKDHDKPIQQVLVDLTD--GG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~---~~~~~g~~~-v--i~~~~~~~~~~~~~~~~~~--gg 256 (371)
.++++||+|+ |.+|.+.++.+...|+ +|+++.++++..+ ...+.+... . .|..+ .......+.+... ++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTK-PESAEKVVKEALEEFGK 91 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence 5789999988 9999999999988999 7888877632222 222333321 1 23322 1222223333221 36
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|+++++.|.
T Consensus 92 id~li~~ag~ 101 (258)
T PRK06935 92 IDILVNNAGT 101 (258)
T ss_pred CCEEEECCCC
Confidence 8999998874
|
|
| >PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.17 Score=46.09 Aligned_cols=94 Identities=20% Similarity=0.199 Sum_probs=64.5
Q ss_pred hccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhhHHHHHhcCCcEEecCCCCCc
Q 017431 166 LLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFDRAKNFGVTEFVNPKDHDK 243 (371)
Q Consensus 166 ~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~-~~~~~~~~~~~~g~~~vi~~~~~~~ 243 (371)
.+||+....+..|....---.|++|+|+|. +.+|.-.+.++...|+ .|++.. ++.+
T Consensus 137 ~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~~--------------------- 194 (296)
T PRK14188 137 LVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTRD--------------------- 194 (296)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCCC---------------------
Confidence 455554444443333222357999999995 8999999999988999 788773 3221
Q ss_pred hHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 244 PIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 244 ~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
..+.+ ..+|+++-++|.+..++..+ +++| ..+|.+|..
T Consensus 195 -l~e~~-----~~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin 232 (296)
T PRK14188 195 -LPAVC-----RRADILVAAVGRPEMVKGDW--IKPG-ATVIDVGIN 232 (296)
T ss_pred -HHHHH-----hcCCEEEEecCChhhcchhe--ecCC-CEEEEcCCc
Confidence 11111 14899999999988766655 7886 888888874
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.12 Score=46.69 Aligned_cols=78 Identities=19% Similarity=0.262 Sum_probs=49.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCC--c-EE--ecCCCCCchHHHHHHhhcC-
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGV--T-EF--VNPKDHDKPIQQVLVDLTD- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~--~-~v--i~~~~~~~~~~~~~~~~~~- 254 (371)
.++++||+|+ |.+|.+.+..+...|+ +|++++++.++.+.+. +.+. . .+ .|..+ ...+.. +.+...
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~-~~~~~~~ 78 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD-QNSIHN-FQLVLKE 78 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC-HHHHHH-HHHHHHh
Confidence 3578999988 9999999988888899 8888888776554332 2221 1 11 23333 122322 333222
Q ss_pred -CCccEEEEccCC
Q 017431 255 -GGVDYSFECIGN 266 (371)
Q Consensus 255 -gg~dvvid~~g~ 266 (371)
+++|+++.+.|.
T Consensus 79 ~~~id~vv~~ag~ 91 (280)
T PRK06914 79 IGRIDLLVNNAGY 91 (280)
T ss_pred cCCeeEEEECCcc
Confidence 378999998774
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.11 Score=47.05 Aligned_cols=79 Identities=18% Similarity=0.216 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCC--c-EE--ecCCCCCchHHHHHHhhcC--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGV--T-EF--VNPKDHDKPIQQVLVDLTD--GG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~g~--~-~v--i~~~~~~~~~~~~~~~~~~--gg 256 (371)
.++++||+|+ |.+|.+.++.+...|+ +|+++++++++.+ +..+++. . .. .|..+ .....+.+.+... ++
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~g~ 94 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV-EDDVSRAVDFTVDKFGT 94 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC-HHHHHHHHHHHHHHhCC
Confidence 4689999988 9999998888888899 8888887765443 3333322 1 11 23332 1222222332222 37
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|+++++.|.
T Consensus 95 id~li~~Ag~ 104 (280)
T PLN02253 95 LDIMVNNAGL 104 (280)
T ss_pred CCEEEECCCc
Confidence 9999998864
|
|
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.23 Score=47.21 Aligned_cols=91 Identities=18% Similarity=0.148 Sum_probs=56.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
-.|++|.|+|.|.+|...++.++.+|+ +|++.++.....+..+.++... + .++.+.+. ..|+|+.++
T Consensus 190 L~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g~~~---~----~~l~ell~-----~aDvV~l~l 256 (385)
T PRK07574 190 LEGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELGLTY---H----VSFDSLVS-----VCDVVTIHC 256 (385)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcCcee---c----CCHHHHhh-----cCCEEEEcC
Confidence 367899999999999999999999999 9999988764444444454321 0 11222221 367666655
Q ss_pred CC-HHH---H-HHHHHHhccCCceEEEEcc
Q 017431 265 GN-VSV---M-RAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 265 g~-~~~---~-~~~~~~l~~~~G~iv~~g~ 289 (371)
.. +++ + ...+..|+++ ..+|.++.
T Consensus 257 Plt~~T~~li~~~~l~~mk~g-a~lIN~aR 285 (385)
T PRK07574 257 PLHPETEHLFDADVLSRMKRG-SYLVNTAR 285 (385)
T ss_pred CCCHHHHHHhCHHHHhcCCCC-cEEEECCC
Confidence 53 111 1 3345556664 66665543
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.38 Score=42.51 Aligned_cols=102 Identities=18% Similarity=0.150 Sum_probs=59.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC-hhhH----HHHHhcCCcE-E--ecCCCCCchHHHHHHhhcC--C
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID-PKKF----DRAKNFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~-~~~~----~~~~~~g~~~-v--i~~~~~~~~~~~~~~~~~~--g 255 (371)
+.+|||+|+ |.+|.+.+.-+...|+ +|+.+.++ .++. ..+++.+... . .|..+ .......+.+... +
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 83 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVST-REGCETLAKATIDRYG 83 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCC-HHHHHHHHHHHHHHcC
Confidence 579999988 8999998888888999 66655432 2222 1223333321 1 23222 1222222333221 3
Q ss_pred CccEEEEccCC----------H---------------HHHHHHHHHhccCCceEEEEccCC
Q 017431 256 GVDYSFECIGN----------V---------------SVMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 256 g~dvvid~~g~----------~---------------~~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
++|++|++.|. . ...+.+.+.+... |+++.+++..
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~~ 143 (252)
T PRK06077 84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASVA 143 (252)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcchh
Confidence 78999998873 1 1244556666775 8999987743
|
|
| >COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.13 Score=46.40 Aligned_cols=131 Identities=18% Similarity=0.164 Sum_probs=84.8
Q ss_pred cCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCC---------CchHHHHHHh
Q 017431 181 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH---------DKPIQQVLVD 251 (371)
Q Consensus 181 ~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~---------~~~~~~~~~~ 251 (371)
.++..++.++|+.|+|..|++++..++..|+ .|...+....+.+..+.+|+...-...+. ..+|...-.+
T Consensus 158 Aagtv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~ 236 (356)
T COG3288 158 AAGTVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAE 236 (356)
T ss_pred hcccccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHH
Confidence 3455677899999999999999999999999 78887777777777777776432111110 2334433333
Q ss_pred hcC---CCccEEEEccCC-----HH-HHHHHHHHhccCCceEEEEccCCC-CCcccccchheee-ceEEEeee
Q 017431 252 LTD---GGVDYSFECIGN-----VS-VMRAALECCHKGWGTSVIVGVAAS-GQEISTRPFQLVT-GRVWKGTA 313 (371)
Q Consensus 252 ~~~---gg~dvvid~~g~-----~~-~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~-~~~~~g~~ 313 (371)
+.. .++|+||-+.-- |. ........|++| ..+|++..... +...+-+.....+ +.++.|..
T Consensus 237 ~~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~ 308 (356)
T COG3288 237 LVAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYT 308 (356)
T ss_pred HHHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhcCCCcccccCCeEEEeCCeEEEeec
Confidence 222 289999986532 12 357788899997 99999966432 2333333322223 77777754
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.11 Score=45.55 Aligned_cols=74 Identities=23% Similarity=0.245 Sum_probs=48.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCc-EEecCCCCCchHHHHHHhhcCC-CccEEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLTDG-GVDYSFE 262 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~~~~~~~~g-g~dvvid 262 (371)
.++++||+|+ |.+|...++.+...|+ +|+++.++.++ .+... ...|..+ .....+.+.+.... +.|++++
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~d~vi~ 74 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPGELFACDLAD-IEQTAATLAQINEIHPVDAIVN 74 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCceEEEeeCCC-HHHHHHHHHHHHHhCCCcEEEE
Confidence 3578999988 9999999998888998 89888887654 11111 1223333 12233334433333 6899999
Q ss_pred ccCC
Q 017431 263 CIGN 266 (371)
Q Consensus 263 ~~g~ 266 (371)
+.|.
T Consensus 75 ~ag~ 78 (234)
T PRK07577 75 NVGI 78 (234)
T ss_pred CCCC
Confidence 8874
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.13 Score=47.74 Aligned_cols=78 Identities=21% Similarity=0.217 Sum_probs=49.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcC---Cc-EE--ecCCCCCchHHHHHHhhc--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFG---VT-EF--VNPKDHDKPIQQVLVDLT--DG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g---~~-~v--i~~~~~~~~~~~~~~~~~--~g 255 (371)
+++++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+ .++. .. .. .|..+ .......+.+.. .+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~ 82 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD-LDSVRRFVDDFRALGK 82 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC-HHHHHHHHHHHHHhCC
Confidence 4678999988 9999999988888898 899888887765433 3332 11 11 23322 122222222221 23
Q ss_pred CccEEEEccC
Q 017431 256 GVDYSFECIG 265 (371)
Q Consensus 256 g~dvvid~~g 265 (371)
.+|++++++|
T Consensus 83 ~iD~li~nAg 92 (322)
T PRK07453 83 PLDALVCNAA 92 (322)
T ss_pred CccEEEECCc
Confidence 6999999887
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.14 Score=47.09 Aligned_cols=79 Identities=19% Similarity=0.216 Sum_probs=49.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc-----CCc-EE--ecCCCCCchHHHHHHhhcC-
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF-----GVT-EF--VNPKDHDKPIQQVLVDLTD- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~-----g~~-~v--i~~~~~~~~~~~~~~~~~~- 254 (371)
.+++|||+|+ |++|.+.++.+...|+ +|+.+.++.++.+.+ +++ +.. .. .|..+ .......+.+...
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~ 92 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTS-LASVRAAADALRAA 92 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCC-HHHHHHHHHHHHhh
Confidence 5689999988 9999999888888899 888888877654322 121 111 11 23322 1222233333222
Q ss_pred -CCccEEEEccCC
Q 017431 255 -GGVDYSFECIGN 266 (371)
Q Consensus 255 -gg~dvvid~~g~ 266 (371)
+++|++++++|.
T Consensus 93 ~~~iD~li~nAg~ 105 (306)
T PRK06197 93 YPRIDLLINNAGV 105 (306)
T ss_pred CCCCCEEEECCcc
Confidence 369999998873
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.75 Score=35.34 Aligned_cols=92 Identities=20% Similarity=0.203 Sum_probs=60.9
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHH
Q 017431 190 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSV 269 (371)
Q Consensus 190 VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~ 269 (371)
|+|.|.|.+|...++.++..+. +|++++.++++.+.+++.|.. ++.-+- .-.+.+++..-..++.++-+++....
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~---~~~~~l~~a~i~~a~~vv~~~~~d~~ 75 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDA---TDPEVLERAGIEKADAVVILTDDDEE 75 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-T---TSHHHHHHTTGGCESEEEEESSSHHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccc---hhhhHHhhcCccccCEEEEccCCHHH
Confidence 5788999999999999999665 899999999999999888854 333222 11233444422389999988887543
Q ss_pred H---HHHHHHhccCCceEEEE
Q 017431 270 M---RAALECCHKGWGTSVIV 287 (371)
Q Consensus 270 ~---~~~~~~l~~~~G~iv~~ 287 (371)
- -..++.+.+. .+++..
T Consensus 76 n~~~~~~~r~~~~~-~~ii~~ 95 (116)
T PF02254_consen 76 NLLIALLARELNPD-IRIIAR 95 (116)
T ss_dssp HHHHHHHHHHHTTT-SEEEEE
T ss_pred HHHHHHHHHHHCCC-CeEEEE
Confidence 2 2333444554 565544
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.18 Score=44.84 Aligned_cols=36 Identities=33% Similarity=0.456 Sum_probs=31.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
...+|+|+|+|++|..++..+...|.++++.++.+.
T Consensus 31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~ 66 (245)
T PRK05690 31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFDT 66 (245)
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 457999999999999999999999998999887654
|
|
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.15 Score=41.70 Aligned_cols=74 Identities=19% Similarity=0.205 Sum_probs=50.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCcE-EecCCCCCchHHHHHHhhcCCCccEEEE
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTE-FVNPKDHDKPIQQVLVDLTDGGVDYSFE 262 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~g~~~-vi~~~~~~~~~~~~~~~~~~gg~dvvid 262 (371)
.++.+|+|+|+|.+|...++.+...|..+|++++++.++.+ ++++++... ..... +..+. -.++|+++.
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~----~~~~~-----~~~~Dvvi~ 87 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL----DLEEL-----LAEADLIIN 87 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec----chhhc-----cccCCEEEe
Confidence 45789999999999999998888887448999988877655 445555421 01111 11111 136999999
Q ss_pred ccCCH
Q 017431 263 CIGNV 267 (371)
Q Consensus 263 ~~g~~ 267 (371)
|++..
T Consensus 88 ~~~~~ 92 (155)
T cd01065 88 TTPVG 92 (155)
T ss_pred CcCCC
Confidence 98873
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.13 Score=46.48 Aligned_cols=81 Identities=20% Similarity=0.245 Sum_probs=52.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCc------EEecCCCC--CchHHHHHHh
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT------EFVNPKDH--DKPIQQVLVD 251 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~------~vi~~~~~--~~~~~~~~~~ 251 (371)
-+|+++||+|+ .++|.+.+..+-..|+ +|+.+.+++++.+...+ .+.. ...|..+. .....+...+
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~ 84 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE 84 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence 46789999987 8999999999999999 99999998887554332 2221 12222220 1122223333
Q ss_pred hcCCCccEEEEccCC
Q 017431 252 LTDGGVDYSFECIGN 266 (371)
Q Consensus 252 ~~~gg~dvvid~~g~ 266 (371)
...|+.|+.++..|.
T Consensus 85 ~~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 85 KFFGKIDILVNNAGA 99 (270)
T ss_pred HhCCCCCEEEEcCCc
Confidence 334589999997775
|
|
| >COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.28 Score=43.18 Aligned_cols=106 Identities=21% Similarity=0.282 Sum_probs=71.8
Q ss_pred hhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc----CCcEEecCCCCCchHHHHHHhhcC
Q 017431 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 179 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~~~~~~~~ 254 (371)
....+..+|++||=+|+| .|-.|..+++..|-..|+++|.++.-++.+++. |... +.... .+. +.+ -..+
T Consensus 44 i~~~~~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~--~dA-e~L-Pf~D 117 (238)
T COG2226 44 ISLLGIKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVV--GDA-ENL-PFPD 117 (238)
T ss_pred HHhhCCCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEE--ech-hhC-CCCC
Confidence 344556689999988665 688899999999866999999999877777642 2221 11000 110 111 1112
Q ss_pred CCccEEEEccCC------HHHHHHHHHHhccCCceEEEEccCC
Q 017431 255 GGVDYSFECIGN------VSVMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 255 gg~dvvid~~g~------~~~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
..||++..+.|- +.++++..+.|.|+ |+++.+....
T Consensus 118 ~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~ 159 (238)
T COG2226 118 NSFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSK 159 (238)
T ss_pred CccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCC
Confidence 278988876653 45699999999997 9999887654
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.12 Score=45.55 Aligned_cols=79 Identities=23% Similarity=0.270 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHH----HHhcCCcE-Ee--cCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR----AKNFGVTE-FV--NPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~----~~~~g~~~-vi--~~~~~~~~~~~~~~~~~~--g 255 (371)
.+++|||+|+ |.+|...+..+...|+ +|++++++.++... +++.+... ++ |..+ .......+.+... +
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 82 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRD-RAALKAAVAAGVEDFG 82 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence 4678999988 9999999988888899 89999888654332 22333221 12 2222 1222333332221 2
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
.+|+++++.+.
T Consensus 83 ~~d~vi~~ag~ 93 (251)
T PRK12826 83 RLDILVANAGI 93 (251)
T ss_pred CCCEEEECCCC
Confidence 68999998754
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.94 E-value=0.15 Score=45.45 Aligned_cols=79 Identities=19% Similarity=0.347 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcE-E--ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~~~~~~~--g 255 (371)
+++++||+|+ |.+|.+.+..+...|+ +|+.+++++++.+.+ ++.+... . .|..+ .......+.+... +
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 87 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD-EEAVAAAFARIDAEHG 87 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhcC
Confidence 5789999988 9999998888888899 899998887654322 2334322 1 23222 1233333333322 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
.+|.++++.|.
T Consensus 88 ~id~vi~~ag~ 98 (256)
T PRK06124 88 RLDILVNNVGA 98 (256)
T ss_pred CCCEEEECCCC
Confidence 68999998874
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.94 E-value=0.14 Score=46.22 Aligned_cols=78 Identities=24% Similarity=0.366 Sum_probs=49.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc---C--Cc-EEe--cCCCCCchHHHHHHhhcC-
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF---G--VT-EFV--NPKDHDKPIQQVLVDLTD- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~---g--~~-~vi--~~~~~~~~~~~~~~~~~~- 254 (371)
+++++||+|+ |.+|.+.++.+...|+ +|+.+++++++.+.. .++ + .. .++ |..+ .......+.+...
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 83 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTD-EDQVARAVDAATAW 83 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCC-HHHHHHHHHHHHHH
Confidence 4689999988 9999999999999999 899988876654322 222 1 11 122 2222 1223233333222
Q ss_pred -CCccEEEEccC
Q 017431 255 -GGVDYSFECIG 265 (371)
Q Consensus 255 -gg~dvvid~~g 265 (371)
+++|+++++.|
T Consensus 84 ~~~~d~li~~ag 95 (276)
T PRK05875 84 HGRLHGVVHCAG 95 (276)
T ss_pred cCCCCEEEECCC
Confidence 37899999887
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.15 Score=45.32 Aligned_cols=78 Identities=27% Similarity=0.354 Sum_probs=48.8
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCc--EE--ecCCCCCchHHHHHHhhcC--CCcc
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVT--EF--VNPKDHDKPIQQVLVDLTD--GGVD 258 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~--~v--i~~~~~~~~~~~~~~~~~~--gg~d 258 (371)
++++||+|+ |.+|...+..+...|+ +|++++++.++.+.+ .++... .. .|..+ .......+.+... +++|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d 79 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTD-AASLAAALANAAAERGPVD 79 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence 468999988 9999998888888899 888888887765433 333211 11 22222 1222222332221 3699
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
+++++.|.
T Consensus 80 ~vi~~ag~ 87 (257)
T PRK07074 80 VLVANAGA 87 (257)
T ss_pred EEEECCCC
Confidence 99998874
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.27 Score=43.53 Aligned_cols=74 Identities=30% Similarity=0.301 Sum_probs=46.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE-E--ecCCCCCchHHHHHHhhcC--CCccE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-F--VNPKDHDKPIQQVLVDLTD--GGVDY 259 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~-v--i~~~~~~~~~~~~~~~~~~--gg~dv 259 (371)
+++++||+|+ |.+|...+..+...|+ +|++++++. ....+... . .|..+ ...+.+.+.+... +.+|+
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~ 79 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSD-AAAVAQVCQRLLAETGPLDV 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 4689999988 8999999998888899 888887765 12222211 1 22222 1223333333221 36899
Q ss_pred EEEccCC
Q 017431 260 SFECIGN 266 (371)
Q Consensus 260 vid~~g~ 266 (371)
++++.|.
T Consensus 80 vi~~ag~ 86 (252)
T PRK08220 80 LVNAAGI 86 (252)
T ss_pred EEECCCc
Confidence 9998875
|
|
| >PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.2 Score=45.31 Aligned_cols=94 Identities=19% Similarity=0.199 Sum_probs=63.8
Q ss_pred hccccchhhhhhhhhcCCC-CCCCEEEEEcCC-hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCc
Q 017431 166 LLGCGVPTGLGAVWNTAKV-EPGSIVAVFGLG-TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDK 243 (371)
Q Consensus 166 ~~~~~~~ta~~~l~~~~~~-~~g~~VlI~Gag-~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~ 243 (371)
.+||+....+..| +..++ -.|++|+|+|.| .+|.-...++...|+ .|+.+.+.. .
T Consensus 136 ~~PcTp~avi~lL-~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gA-tVtv~hs~t---------------------~ 192 (285)
T PRK14191 136 FVPATPMGVMRLL-KHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGA-SVSVCHILT---------------------K 192 (285)
T ss_pred CCCCcHHHHHHHH-HHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-EEEEEeCCc---------------------H
Confidence 3455554444433 43343 469999999996 899999999999999 777663211 1
Q ss_pred hHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 244 PIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 244 ~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
++.+.++ .+|+++-++|.+..+. -..++++ ..++.+|..
T Consensus 193 ~l~~~~~-----~ADIvV~AvG~p~~i~--~~~vk~G-avVIDvGi~ 231 (285)
T PRK14191 193 DLSFYTQ-----NADIVCVGVGKPDLIK--ASMVKKG-AVVVDIGIN 231 (285)
T ss_pred HHHHHHH-----hCCEEEEecCCCCcCC--HHHcCCC-cEEEEeecc
Confidence 2222222 4899999999987544 3467886 889999864
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.14 Score=46.35 Aligned_cols=78 Identities=23% Similarity=0.330 Sum_probs=49.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh---cCCcE-E--ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN---FGVTE-F--VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~---~g~~~-v--i~~~~~~~~~~~~~~~~~~--g 255 (371)
+++++||+|+ |++|.+.+..+...|+ +|+.+++++++.+.+ ++ .+... . .|..+ .......+.+... +
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g 86 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLD-KESLEQARQQILEDFG 86 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 4689999988 9999999999889999 888888876654322 22 23221 1 22222 1222222332222 3
Q ss_pred CccEEEEccC
Q 017431 256 GVDYSFECIG 265 (371)
Q Consensus 256 g~dvvid~~g 265 (371)
.+|++++++|
T Consensus 87 ~id~li~~ag 96 (278)
T PRK08277 87 PCDILINGAG 96 (278)
T ss_pred CCCEEEECCC
Confidence 7999999887
|
|
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.87 Score=33.67 Aligned_cols=85 Identities=22% Similarity=0.314 Sum_probs=54.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcC---CCeEE-EEcCChhhHHHH-HhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAG---ASRVI-GIDIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g---~~~v~-~v~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
+|.|+|+|.+|.+.+.-....| . +|+ +.++++++.+.+ ++++..... .+..+.+. ..|++|-|
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~------~~~~~~~~-----~advvila 68 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATA------DDNEEAAQ-----EADVVILA 68 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEES------EEHHHHHH-----HTSEEEE-
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhcccccc------CChHHhhc-----cCCEEEEE
Confidence 5778899999999998888888 6 777 448888877655 566643221 12333333 38999999
Q ss_pred cCCHHHHHHHHHH---hccCCceEEEE
Q 017431 264 IGNVSVMRAALEC---CHKGWGTSVIV 287 (371)
Q Consensus 264 ~g~~~~~~~~~~~---l~~~~G~iv~~ 287 (371)
+.... +...++. ..++ ..+|.+
T Consensus 69 v~p~~-~~~v~~~i~~~~~~-~~vis~ 93 (96)
T PF03807_consen 69 VKPQQ-LPEVLSEIPHLLKG-KLVISI 93 (96)
T ss_dssp S-GGG-HHHHHHHHHHHHTT-SEEEEE
T ss_pred ECHHH-HHHHHHHHhhccCC-CEEEEe
Confidence 98744 4444444 3453 555554
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >PLN02823 spermine synthase | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.24 Score=46.11 Aligned_cols=99 Identities=19% Similarity=0.132 Sum_probs=61.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCc--EEecCCCC---CchHHHHHHhhcCCCccEE
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT--EFVNPKDH---DKPIQQVLVDLTDGGVDYS 260 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~--~vi~~~~~---~~~~~~~~~~~~~gg~dvv 260 (371)
..++|||+|.| -|..+..+++..+..+|++++.+++-.++++++-.. ..+..... -.+....+. ...+.+|+|
T Consensus 103 ~pk~VLiiGgG-~G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~-~~~~~yDvI 180 (336)
T PLN02823 103 NPKTVFIMGGG-EGSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELE-KRDEKFDVI 180 (336)
T ss_pred CCCEEEEECCC-chHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHh-hCCCCccEE
Confidence 34789999886 345556777777777999999999999988864321 01110000 122223332 233489988
Q ss_pred E-EccC-----------CHHHHH-HHHHHhccCCceEEEE
Q 017431 261 F-ECIG-----------NVSVMR-AALECCHKGWGTSVIV 287 (371)
Q Consensus 261 i-d~~g-----------~~~~~~-~~~~~l~~~~G~iv~~ 287 (371)
| |... +.+.++ .+.+.|+++ |.++.-
T Consensus 181 i~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~-Gvlv~q 219 (336)
T PLN02823 181 IGDLADPVEGGPCYQLYTKSFYERIVKPKLNPG-GIFVTQ 219 (336)
T ss_pred EecCCCccccCcchhhccHHHHHHHHHHhcCCC-cEEEEe
Confidence 8 4321 123455 788899997 998765
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.18 Score=42.06 Aligned_cols=38 Identities=32% Similarity=0.281 Sum_probs=31.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKF 224 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~ 224 (371)
++++++|+|+ +++|.+.+..+...|+ +|+.++++++..
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~ 53 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESG 53 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHH
Confidence 5789999988 8899998888888898 898888776544
|
|
| >COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.32 Score=44.05 Aligned_cols=97 Identities=18% Similarity=0.175 Sum_probs=64.6
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC-cEE-e-cCCCC--CchHHHHHHhhcCCCccEEE-
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV-TEF-V-NPKDH--DKPIQQVLVDLTDGGVDYSF- 261 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~-~~v-i-~~~~~--~~~~~~~~~~~~~gg~dvvi- 261 (371)
++|||+|.| -|-.+=.++++...+++++++.+++=.++++++-. ... . |++-. -.+-.+.+++.. .+||+||
T Consensus 78 k~VLiiGgG-dG~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~-~~fDvIi~ 155 (282)
T COG0421 78 KRVLIIGGG-DGGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCE-EKFDVIIV 155 (282)
T ss_pred CeEEEECCC-ccHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCC-CcCCEEEE
Confidence 599999765 35556678888888899999999998898887432 110 0 11100 012223333332 2799888
Q ss_pred EccCC---------HHHHHHHHHHhccCCceEEEE
Q 017431 262 ECIGN---------VSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 262 d~~g~---------~~~~~~~~~~l~~~~G~iv~~ 287 (371)
|+... .+..+.+-++|+++ |.++..
T Consensus 156 D~tdp~gp~~~Lft~eFy~~~~~~L~~~-Gi~v~q 189 (282)
T COG0421 156 DSTDPVGPAEALFTEEFYEGCRRALKED-GIFVAQ 189 (282)
T ss_pred cCCCCCCcccccCCHHHHHHHHHhcCCC-cEEEEe
Confidence 55444 56789999999997 999877
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.15 Score=45.20 Aligned_cols=76 Identities=20% Similarity=0.337 Sum_probs=49.4
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCcEE---ecCCCCCchHHHHHHhhcC--CCccEEE
Q 017431 189 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEF---VNPKDHDKPIQQVLVDLTD--GGVDYSF 261 (371)
Q Consensus 189 ~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~v---i~~~~~~~~~~~~~~~~~~--gg~dvvi 261 (371)
+|+|+|+ |.+|.+.+..+...|+ +|+++++++++.+.+. .++.... .|..+ .....+.+.+... +++|+++
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~~~id~vi 79 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN-RAAIEEMLASLPAEWRNIDVLV 79 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 6899988 9999999999988999 8999988887665443 3443221 23222 1223333333222 3699999
Q ss_pred EccCC
Q 017431 262 ECIGN 266 (371)
Q Consensus 262 d~~g~ 266 (371)
+++|.
T Consensus 80 ~~ag~ 84 (248)
T PRK10538 80 NNAGL 84 (248)
T ss_pred ECCCc
Confidence 98764
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.87 E-value=0.15 Score=45.35 Aligned_cols=79 Identities=28% Similarity=0.402 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCcE-E--ecCCCCCchHHHHHHhhc--CCCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTE-F--VNPKDHDKPIQQVLVDLT--DGGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~-v--i~~~~~~~~~~~~~~~~~--~gg~d 258 (371)
.++++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+. +++... . .|..+ .......+.+.. .+.+|
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 82 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTR-QDSIDRIVAAAVERFGGID 82 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence 3678999988 9999999999988999 8999988887655433 343221 1 22222 122223232221 13689
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
+++++.+.
T Consensus 83 ~li~~ag~ 90 (257)
T PRK07067 83 ILFNNAAL 90 (257)
T ss_pred EEEECCCc
Confidence 99998763
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.86 E-value=0.16 Score=44.85 Aligned_cols=77 Identities=18% Similarity=0.328 Sum_probs=48.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----c--CCc-EE--ecCCCCCchHHHHHHhhcC--
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----F--GVT-EF--VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~--g~~-~v--i~~~~~~~~~~~~~~~~~~-- 254 (371)
++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.+ . +.. ++ .|..+ .....+.+.+...
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 79 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVND-HDQVFEVFAEFRDEL 79 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 468999988 9999998888778898 88888888776543321 1 211 11 23333 1233333333322
Q ss_pred CCccEEEEccC
Q 017431 255 GGVDYSFECIG 265 (371)
Q Consensus 255 gg~dvvid~~g 265 (371)
+++|+++++.|
T Consensus 80 ~~id~vi~~ag 90 (248)
T PRK08251 80 GGLDRVIVNAG 90 (248)
T ss_pred CCCCEEEECCC
Confidence 37999999886
|
|
| >PLN02589 caffeoyl-CoA O-methyltransferase | Back alignment and domain information |
|---|
Probab=94.86 E-value=0.23 Score=44.08 Aligned_cols=102 Identities=17% Similarity=0.289 Sum_probs=65.6
Q ss_pred cCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHH----hcCCcEEecCCCCCchHHHHHHhhc--
Q 017431 181 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLT-- 253 (371)
Q Consensus 181 ~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~v~~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~-- 253 (371)
..+....++||=+|.+ +|..++.+|+.++- .+|+.++.+++..+.++ +.|...-+.... .+..+.+.++.
T Consensus 74 l~~~~~ak~iLEiGT~-~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~--G~a~e~L~~l~~~ 150 (247)
T PLN02589 74 LLKLINAKNTMEIGVY-TGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFRE--GPALPVLDQMIED 150 (247)
T ss_pred HHHHhCCCEEEEEeCh-hhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe--ccHHHHHHHHHhc
Confidence 3445556789988884 68888889988742 28999999998777664 455433222222 33444454543
Q ss_pred ---CCCccEEEEccCC---HHHHHHHHHHhccCCceEEE
Q 017431 254 ---DGGVDYSFECIGN---VSVMRAALECCHKGWGTSVI 286 (371)
Q Consensus 254 ---~gg~dvvid~~g~---~~~~~~~~~~l~~~~G~iv~ 286 (371)
.+.||+||--... ...++.+++.|++| |.++.
T Consensus 151 ~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv~ 188 (247)
T PLN02589 151 GKYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIGY 188 (247)
T ss_pred cccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEEE
Confidence 1479988843332 34578889999996 77653
|
|
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.24 Score=46.26 Aligned_cols=38 Identities=32% Similarity=0.482 Sum_probs=33.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK 223 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~ 223 (371)
-.|++|.|+|.|.+|...++.++.+|+ +|++.+++.+.
T Consensus 148 L~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~ 185 (333)
T PRK13243 148 VYGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKP 185 (333)
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCCh
Confidence 368999999999999999999999999 89999876543
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.17 Score=44.91 Aligned_cols=79 Identities=20% Similarity=0.319 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh---cCCcE-E--ecCCCCCchHHHHHHhhc--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN---FGVTE-F--VNPKDHDKPIQQVLVDLT--DG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~---~g~~~-v--i~~~~~~~~~~~~~~~~~--~g 255 (371)
.++++||+|+ |++|.+.+..+...|+ +|+.+++++++.+.+ .+ .+... . .|..+ .......+.+.. .+
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 85 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTH-KQEVEAAIEHIEKDIG 85 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCC-HHHHHHHHHHHHHhcC
Confidence 4689999988 9999999988888999 888888887654322 22 23221 1 22222 122222232221 13
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|+++++.|.
T Consensus 86 ~id~vi~~ag~ 96 (254)
T PRK08085 86 PIDVLINNAGI 96 (254)
T ss_pred CCCEEEECCCc
Confidence 79999998874
|
|
| >COG0031 CysK Cysteine synthase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.8 Score=41.65 Aligned_cols=59 Identities=24% Similarity=0.387 Sum_probs=44.4
Q ss_pred hhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE---cCChhhHHHHHhcCCcEEecCC
Q 017431 179 WNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI---DIDPKKFDRAKNFGVTEFVNPK 239 (371)
Q Consensus 179 ~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v---~~~~~~~~~~~~~g~~~vi~~~ 239 (371)
...+.+++|.+| |-++ |..|++...+|+.+|+ +++.+ ..+.+|.++++.+|+.-++...
T Consensus 54 e~~G~l~pG~tI-VE~TSGNTGI~LA~vaa~~Gy-~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 54 EKRGLLKPGGTI-VEATSGNTGIALAMVAAAKGY-RLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HHcCCCCCCCEE-EEcCCChHHHHHHHHHHHcCC-cEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 456779999844 4455 8999999999999999 55554 3366888999999996655444
|
|
| >TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.32 Score=42.29 Aligned_cols=100 Identities=21% Similarity=0.222 Sum_probs=61.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEEe---------cCCCCCchHHHHHHhhc-
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFV---------NPKDHDKPIQQVLVDLT- 253 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~vi---------~~~~~~~~~~~~~~~~~- 253 (371)
.++.+||+.|+| .|.-++.+|. .|. .|++++.++...+.+ ++.+..... ..... .-+...+.+..
T Consensus 33 ~~~~rvLd~GCG-~G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~D~~~~~~ 108 (213)
T TIGR03840 33 PAGARVFVPLCG-KSLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNI-EIFCGDFFALTA 108 (213)
T ss_pred CCCCeEEEeCCC-chhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCce-EEEEccCCCCCc
Confidence 567799999886 5777778875 699 899999999877764 333321000 00000 00000011111
Q ss_pred --CCCccEEEEccCC--------HHHHHHHHHHhccCCceEEEEcc
Q 017431 254 --DGGVDYSFECIGN--------VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 254 --~gg~dvvid~~g~--------~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
.+.||.++|+..- +..++.+.++|+++ |+++.++.
T Consensus 109 ~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~ 153 (213)
T TIGR03840 109 ADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITL 153 (213)
T ss_pred ccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEE
Confidence 1368999996531 34578999999997 98766654
|
Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity. |
| >PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.23 Score=44.85 Aligned_cols=94 Identities=18% Similarity=0.194 Sum_probs=64.7
Q ss_pred hccccchhhhhhhhhcCCC-CCCCEEEEEcCC-hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCc
Q 017431 166 LLGCGVPTGLGAVWNTAKV-EPGSIVAVFGLG-TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDK 243 (371)
Q Consensus 166 ~~~~~~~ta~~~l~~~~~~-~~g~~VlI~Gag-~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~ 243 (371)
..||+....+..| +..++ -.|++|+|+|-| .+|.-...++...|+ .|+.+.+.. .
T Consensus 138 ~~PcTp~av~~ll-~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~a-tVtv~hs~T---------------------~ 194 (285)
T PRK10792 138 LRPCTPRGIMTLL-ERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGC-TVTVCHRFT---------------------K 194 (285)
T ss_pred CCCCCHHHHHHHH-HHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCC-eEEEEECCC---------------------C
Confidence 3455555444433 33333 469999999985 599999999999999 777774321 1
Q ss_pred hHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 244 PIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 244 ~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
++.+.++ .+|+++.++|.+..+.. ..++++ ..++.+|..
T Consensus 195 ~l~~~~~-----~ADIvi~avG~p~~v~~--~~vk~g-avVIDvGin 233 (285)
T PRK10792 195 NLRHHVR-----NADLLVVAVGKPGFIPG--EWIKPG-AIVIDVGIN 233 (285)
T ss_pred CHHHHHh-----hCCEEEEcCCCcccccH--HHcCCC-cEEEEcccc
Confidence 2222222 49999999999875543 778886 888999854
|
|
| >PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1 | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.02 Score=46.64 Aligned_cols=95 Identities=18% Similarity=0.198 Sum_probs=56.0
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCC----CchHHHHHHhhcCCCccEEEEccC
Q 017431 190 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH----DKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 190 VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~----~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
|+|+|+|++|......++..|. .|..+.+.+ +.+.+++.|........+. ....... ....+.+|++|-|+-
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK 76 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK 76 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence 6899999999998888877899 899998888 7776766554221111000 0000000 011137999999887
Q ss_pred CHH---HHHHHHHHhccCCceEEEEcc
Q 017431 266 NVS---VMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 266 ~~~---~~~~~~~~l~~~~G~iv~~g~ 289 (371)
..+ .++.+...+.+. ..++.+.+
T Consensus 77 a~~~~~~l~~l~~~~~~~-t~iv~~qN 102 (151)
T PF02558_consen 77 AYQLEQALQSLKPYLDPN-TTIVSLQN 102 (151)
T ss_dssp GGGHHHHHHHHCTGEETT-EEEEEESS
T ss_pred ccchHHHHHHHhhccCCC-cEEEEEeC
Confidence 633 234444444553 56776644
|
1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B .... |
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.77 E-value=0.23 Score=45.29 Aligned_cols=95 Identities=19% Similarity=0.198 Sum_probs=65.6
Q ss_pred hccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCch
Q 017431 166 LLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKP 244 (371)
Q Consensus 166 ~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~ 244 (371)
.+||+....+..|....---.|++|.|+|. +.+|.-...++...|+ .|++..+... +
T Consensus 138 ~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~---------------------~ 195 (301)
T PRK14194 138 LTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRST---------------------D 195 (301)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCC---------------------C
Confidence 455554444443333322357999999999 5999999999999999 8888754322 1
Q ss_pred HHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 245 IQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 245 ~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
..+..+ .+|+++-++|.+..+...+ ++++ ..+|.+|..
T Consensus 196 l~e~~~-----~ADIVIsavg~~~~v~~~~--ik~G-aiVIDvgin 233 (301)
T PRK14194 196 AKALCR-----QADIVVAAVGRPRLIDADW--LKPG-AVVIDVGIN 233 (301)
T ss_pred HHHHHh-----cCCEEEEecCChhcccHhh--ccCC-cEEEEeccc
Confidence 111111 4899999999988776655 8886 888888864
|
|
| >PLN03139 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.77 E-value=0.28 Score=46.64 Aligned_cols=47 Identities=19% Similarity=0.200 Sum_probs=37.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 232 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~ 232 (371)
-.|++|.|+|.|.+|...++.++.+|+ +|++.++.....+..++.|+
T Consensus 197 L~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~ 243 (386)
T PLN03139 197 LEGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGA 243 (386)
T ss_pred CCCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCc
Confidence 468899999999999999999999999 89998876544444445554
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.75 E-value=0.2 Score=44.83 Aligned_cols=78 Identities=19% Similarity=0.297 Sum_probs=47.2
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE--ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF--VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g--~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v--i~~~~~~~~~~~~~~~~~~-- 254 (371)
+|+++||+|+ + ++|.+.++.+...|+ +|+.+.++++..+.+ .+.|.... .|..+ .....+.+.+...
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 84 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTN-PKSISNLFDDIKEKW 84 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCC-HHHHHHHHHHHHHHc
Confidence 5789999988 4 799998888878899 788877664222222 23343322 33333 1233333333222
Q ss_pred CCccEEEEccC
Q 017431 255 GGVDYSFECIG 265 (371)
Q Consensus 255 gg~dvvid~~g 265 (371)
+.+|+++++.|
T Consensus 85 g~iDilVnnag 95 (260)
T PRK06603 85 GSFDFLLHGMA 95 (260)
T ss_pred CCccEEEEccc
Confidence 37999998776
|
|
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=94.75 E-value=0.3 Score=39.34 Aligned_cols=32 Identities=31% Similarity=0.505 Sum_probs=28.9
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 220 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~ 220 (371)
+|+|+|+|++|...+..+...|.++++.++.+
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 48899999999999999999999899999765
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >PRK01683 trans-aconitate 2-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.75 E-value=0.39 Score=42.99 Aligned_cols=97 Identities=21% Similarity=0.281 Sum_probs=64.4
Q ss_pred hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCc-EEecCCCCCchHHHHHHhhcC-CCc
Q 017431 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLTD-GGV 257 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~~~~~~~~-gg~ 257 (371)
....+.++++||=+|+| .|..+..+++..+..+|++++.+++-.+.+++.... .++.. + . ..... ..+
T Consensus 25 ~~~~~~~~~~vLDiGcG-~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~-d----~----~~~~~~~~f 94 (258)
T PRK01683 25 ARVPLENPRYVVDLGCG-PGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEA-D----I----ASWQPPQAL 94 (258)
T ss_pred hhCCCcCCCEEEEEccc-CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEEC-c----h----hccCCCCCc
Confidence 44556788999988885 456677888776544999999999888777654321 12211 1 1 11112 279
Q ss_pred cEEEEccC-----C-HHHHHHHHHHhccCCceEEEE
Q 017431 258 DYSFECIG-----N-VSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 258 dvvid~~g-----~-~~~~~~~~~~l~~~~G~iv~~ 287 (371)
|+|+.... . ...+..+.+.|+++ |.++..
T Consensus 95 D~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~ 129 (258)
T PRK01683 95 DLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQ 129 (258)
T ss_pred cEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEE
Confidence 99986433 1 35688899999997 998875
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.18 Score=44.44 Aligned_cols=79 Identities=23% Similarity=0.214 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcE-E--ecCCCCCchHHHHHHhhc--CCCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE-F--VNPKDHDKPIQQVLVDLT--DGGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~-v--i~~~~~~~~~~~~~~~~~--~gg~d 258 (371)
++.++||+|+ |.+|...+..+...|+ .|+..+++.++.+.+ .+++... + .|..+ .....+.+.+.. -+++|
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 82 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSD-RDEVKALGQKAEADLEGVD 82 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence 4679999988 9999998888888898 788877776655433 3344322 1 22222 122222222221 13799
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
+++++.|.
T Consensus 83 ~vi~~ag~ 90 (245)
T PRK12936 83 ILVNNAGI 90 (245)
T ss_pred EEEECCCC
Confidence 99998874
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.17 Score=45.13 Aligned_cols=76 Identities=24% Similarity=0.310 Sum_probs=47.9
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh---cCCcEE--ecCCCCCchHHHHHHhhc--CCCccE
Q 017431 189 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN---FGVTEF--VNPKDHDKPIQQVLVDLT--DGGVDY 259 (371)
Q Consensus 189 ~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~---~g~~~v--i~~~~~~~~~~~~~~~~~--~gg~dv 259 (371)
++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ .+ .+.... .|..+ .....+.+.+.. .+++|+
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d-~~~~~~~~~~~~~~~g~id~ 79 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSD-KDDLKNLVKEAWELLGGIDA 79 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCC-HHHHHHHHHHHHHhcCCCCE
Confidence 6899988 8999998888888899 899988887664432 22 232222 23222 122333333322 237999
Q ss_pred EEEccCC
Q 017431 260 SFECIGN 266 (371)
Q Consensus 260 vid~~g~ 266 (371)
++++.|.
T Consensus 80 li~naG~ 86 (259)
T PRK08340 80 LVWNAGN 86 (259)
T ss_pred EEECCCC
Confidence 9998874
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.2 Score=45.29 Aligned_cols=102 Identities=14% Similarity=0.274 Sum_probs=64.2
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChh---hHH-HHHhcCCcEE--ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPK---KFD-RAKNFGVTEF--VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga---g~vG~~ai~la~~~g~~~v~~v~~~~~---~~~-~~~~~g~~~v--i~~~~~~~~~~~~~~~~~~-- 254 (371)
.++++||+|+ +++|.+.++.+...|+ +|+.+.++++ +.+ ..++++.... .|..+ .......+.+...
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~i~~~~ 81 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSK-PEHFKSLAESLKKDL 81 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCC-HHHHHHHHHHHHHHc
Confidence 4689999987 4899998888888999 8888877742 222 2234553322 33333 1223333333322
Q ss_pred CCccEEEEccCCH-----------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 255 GGVDYSFECIGNV-----------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 255 gg~dvvid~~g~~-----------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+.+|+++++.|.. ...+.++..|..+ |+++.+++.
T Consensus 82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~ 145 (274)
T PRK08415 82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYL 145 (274)
T ss_pred CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecC
Confidence 4799999988731 1245566677775 999988764
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.17 Score=44.56 Aligned_cols=79 Identities=19% Similarity=0.289 Sum_probs=49.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcE-Ee--cCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-vi--~~~~~~~~~~~~~~~~~~--g 255 (371)
.+.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+ +..+... .+ |..+ .....+.+.+... +
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 83 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSD-YEEVTAAIEQLKNELG 83 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 3578999988 8999999988888999 899998887654322 2233222 12 2222 1223333333221 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|++|++.|.
T Consensus 84 ~id~vi~~ag~ 94 (239)
T PRK07666 84 SIDILINNAGI 94 (239)
T ss_pred CccEEEEcCcc
Confidence 79999998864
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=94.69 E-value=0.2 Score=45.08 Aligned_cols=80 Identities=21% Similarity=0.306 Sum_probs=49.4
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh----hHHHHHhcCCcE--EecCCCCCchHHHHHHhhcC--C
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK----KFDRAKNFGVTE--FVNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~----~~~~~~~~g~~~--vi~~~~~~~~~~~~~~~~~~--g 255 (371)
-+|+.|||+|+ +++|.+.++=.-..|+ +++..+.+.+ ..+.+++.|-.+ ..|-.+ .++..+...+... |
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~-~eei~~~a~~Vk~e~G 113 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISD-REEIYRLAKKVKKEVG 113 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCC-HHHHHHHHHHHHHhcC
Confidence 46899999988 7999886666666688 7878777664 334445445212 233333 2333333333222 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
.+|+++|.+|-
T Consensus 114 ~V~ILVNNAGI 124 (300)
T KOG1201|consen 114 DVDILVNNAGI 124 (300)
T ss_pred CceEEEecccc
Confidence 79999998775
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.16 Score=45.35 Aligned_cols=78 Identities=21% Similarity=0.310 Sum_probs=48.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh----cCC--cEEe--cCCCCCchHHHHHHhhcC--
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN----FGV--TEFV--NPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~----~g~--~~vi--~~~~~~~~~~~~~~~~~~-- 254 (371)
+++|||+|+ |.+|.+.+..+...|+ +|+.++++.++.+.+ .+ .+. .+.+ |..+ .......+.+...
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~ 79 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATS-EQSVLALSRGVDEIF 79 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCC-HHHHHHHHHHHHHHc
Confidence 468999988 8999999988888899 888888877654322 22 221 1122 2222 1222223333221
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|+++++.|.
T Consensus 80 ~~id~vv~~ag~ 91 (259)
T PRK12384 80 GRVDLLVYNAGI 91 (259)
T ss_pred CCCCEEEECCCc
Confidence 378999998873
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.31 Score=46.65 Aligned_cols=106 Identities=19% Similarity=0.294 Sum_probs=61.6
Q ss_pred CCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-------HHHhc-CCcEE-ecCCCCCchHHHHHHh
Q 017431 182 AKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-------RAKNF-GVTEF-VNPKDHDKPIQQVLVD 251 (371)
Q Consensus 182 ~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~-------~~~~~-g~~~v-i~~~~~~~~~~~~~~~ 251 (371)
.....+.+|||+|+ |.+|...+..+...|+ +|++++++..+.+ ..... ++..+ .|..+ ...+...+.+
T Consensus 55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d-~~~l~~~~~~ 132 (390)
T PLN02657 55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTD-ADSLRKVLFS 132 (390)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCC-HHHHHHHHHH
Confidence 44566789999988 9999999999888999 8888888764321 11112 22222 23333 1223333332
Q ss_pred hcCCCccEEEEccCCH------------HHHHHHHHHhcc-CCceEEEEccC
Q 017431 252 LTDGGVDYSFECIGNV------------SVMRAALECCHK-GWGTSVIVGVA 290 (371)
Q Consensus 252 ~~~gg~dvvid~~g~~------------~~~~~~~~~l~~-~~G~iv~~g~~ 290 (371)
. +.++|+||+|++.. .....+++.+.. +-+++|.++..
T Consensus 133 ~-~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~ 183 (390)
T PLN02657 133 E-GDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI 183 (390)
T ss_pred h-CCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence 2 11699999988642 012233444433 22468887654
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=94.66 E-value=0.16 Score=44.97 Aligned_cols=78 Identities=26% Similarity=0.359 Sum_probs=49.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCcE-E--ecCCCCCchHHHHHHhhc--CCC
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE-F--VNPKDHDKPIQQVLVDLT--DGG 256 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~~-v--i~~~~~~~~~~~~~~~~~--~gg 256 (371)
++++||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+ .+... . .|..+ ..++...+.+.. .++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 78 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK-EDEIADMIAAAAAEFGG 78 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHhcCC
Confidence 358999988 9999999988888899 89999888776554432 22211 1 23322 122333232322 136
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
.|++|.+.+.
T Consensus 79 ~d~vi~~a~~ 88 (255)
T TIGR01963 79 LDILVNNAGI 88 (255)
T ss_pred CCEEEECCCC
Confidence 8999987764
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.66 E-value=0.18 Score=46.50 Aligned_cols=34 Identities=29% Similarity=0.279 Sum_probs=29.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID 220 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~ 220 (371)
.++++||+|+ +++|.+.++.+...|+ +|+.++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecc
Confidence 5789999988 8999999998888999 88888776
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=94.66 E-value=0.086 Score=49.52 Aligned_cols=75 Identities=21% Similarity=0.232 Sum_probs=47.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcC----CcE-EecCCCCCchHHHHHHhhcCC-Cc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFG----VTE-FVNPKDHDKPIQQVLVDLTDG-GV 257 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~g----~~~-vi~~~~~~~~~~~~~~~~~~g-g~ 257 (371)
+|++|||+|+ |.+|.+.++.+...|. +|+++++++.... ..+.++ ... ..|..+ .+.+.+.... ++
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-----~~~~~~~~~~~~~ 76 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRD-----AAKLRKAIAEFKP 76 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccCCC-----HHHHHHHHhhcCC
Confidence 4689999987 9999999999999999 8888877665322 212222 111 112222 1223333333 68
Q ss_pred cEEEEccCC
Q 017431 258 DYSFECIGN 266 (371)
Q Consensus 258 dvvid~~g~ 266 (371)
|+++++++.
T Consensus 77 d~vih~A~~ 85 (349)
T TIGR02622 77 EIVFHLAAQ 85 (349)
T ss_pred CEEEECCcc
Confidence 999998873
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PRK05562 precorrin-2 dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.62 E-value=1.4 Score=38.41 Aligned_cols=93 Identities=14% Similarity=0.095 Sum_probs=57.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP-KKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
++.+|||+|+|.++.-=+..+...|+ +|+++...- +....+.+.|.-..+ ..++... .+ .++++||-|+
T Consensus 24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~~~~~i~~~-~r~~~~~------dl--~g~~LViaAT 93 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLKKYGNLKLI-KGNYDKE------FI--KDKHLIVIAT 93 (223)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHHhCCCEEEE-eCCCChH------Hh--CCCcEEEECC
Confidence 56899999999999988888888999 777775432 222222233322222 2221111 11 2799999999
Q ss_pred CCHHHHHHHHHHhccCCceEEEEcc
Q 017431 265 GNVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 265 g~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
+.+..-+...+..... +.++....
T Consensus 94 dD~~vN~~I~~~a~~~-~~lvn~vd 117 (223)
T PRK05562 94 DDEKLNNKIRKHCDRL-YKLYIDCS 117 (223)
T ss_pred CCHHHHHHHHHHHHHc-CCeEEEcC
Confidence 9977555555544553 77776644
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.58 E-value=0.52 Score=41.79 Aligned_cols=38 Identities=24% Similarity=0.221 Sum_probs=29.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEE-EcCChhhH
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIG-IDIDPKKF 224 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~-v~~~~~~~ 224 (371)
.+.+++|+|+ |.+|...++.+...|+ +|++ ..++.++.
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~-~v~i~~~r~~~~~ 44 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGA-LVAIHYGRNKQAA 44 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHH
Confidence 3579999988 9999999998888899 6655 45655543
|
|
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.58 E-value=0.25 Score=43.49 Aligned_cols=36 Identities=39% Similarity=0.461 Sum_probs=31.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
.+.+|+|+|+|++|..++..+...|.++++.+|.+.
T Consensus 26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D~ 61 (231)
T PRK08328 26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQT 61 (231)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 347899999999999999999999999999997543
|
|
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=94.56 E-value=0.28 Score=45.28 Aligned_cols=89 Identities=17% Similarity=0.217 Sum_probs=55.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
..|++|.|+|.|.+|...++.++.+|+ +|++.++..++.. +....... .++.+.+. ..|+|+.++
T Consensus 134 l~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----~~~~~~~~----~~l~e~l~-----~aDvvv~~l 198 (312)
T PRK15469 134 REDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----GVQSFAGR----EELSAFLS-----QTRVLINLL 198 (312)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----Cceeeccc----ccHHHHHh-----cCCEEEECC
Confidence 367899999999999999999999999 8999877554321 11111101 12222221 367777766
Q ss_pred CCHHH-----HHHHHHHhccCCceEEEEcc
Q 017431 265 GNVSV-----MRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 265 g~~~~-----~~~~~~~l~~~~G~iv~~g~ 289 (371)
..... -...++.|+++ ..+|.+|.
T Consensus 199 Plt~~T~~li~~~~l~~mk~g-a~lIN~aR 227 (312)
T PRK15469 199 PNTPETVGIINQQLLEQLPDG-AYLLNLAR 227 (312)
T ss_pred CCCHHHHHHhHHHHHhcCCCC-cEEEECCC
Confidence 64221 13456667775 77776654
|
|
| >TIGR00417 speE spermidine synthase | Back alignment and domain information |
|---|
Probab=94.54 E-value=0.33 Score=43.87 Aligned_cols=100 Identities=19% Similarity=0.119 Sum_probs=59.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCc--EEecCCCC---CchHHHHHHhhcCCCccEE
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT--EFVNPKDH---DKPIQQVLVDLTDGGVDYS 260 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~--~vi~~~~~---~~~~~~~~~~~~~gg~dvv 260 (371)
..++||++|+|. |..+..+++.....++++++.+++-.+.++++-.. ..++.... ..+..+.+.+ ..+.+|+|
T Consensus 72 ~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~-~~~~yDvI 149 (270)
T TIGR00417 72 NPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLAD-TENTFDVI 149 (270)
T ss_pred CCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHh-CCCCccEE
Confidence 456999998864 44555666666566899999998877776653110 00100000 0122223332 23489988
Q ss_pred EEccC----------CHHHHHHHHHHhccCCceEEEEc
Q 017431 261 FECIG----------NVSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 261 id~~g----------~~~~~~~~~~~l~~~~G~iv~~g 288 (371)
+.... ..+.++.+.+.|+++ |.++...
T Consensus 150 i~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~ 186 (270)
T TIGR00417 150 IVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQS 186 (270)
T ss_pred EEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcC
Confidence 84222 234567889999997 9998763
|
the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM. |
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=94.53 E-value=0.23 Score=43.89 Aligned_cols=78 Identities=19% Similarity=0.270 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcE-Ee--cCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-vi--~~~~~~~~~~~~~~~~~~--g 255 (371)
+++++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+ ++.+... ++ |..+ .....+.+.+... +
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~~ 79 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITD-RDSVDTAVAAAEQALG 79 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 4689999988 9999999999888999 888888877654433 2223211 22 2222 1222222332221 3
Q ss_pred CccEEEEccC
Q 017431 256 GVDYSFECIG 265 (371)
Q Consensus 256 g~dvvid~~g 265 (371)
++|++|++.|
T Consensus 80 ~~d~vi~~ag 89 (250)
T TIGR03206 80 PVDVLVNNAG 89 (250)
T ss_pred CCCEEEECCC
Confidence 6899999887
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=94.53 E-value=0.28 Score=42.09 Aligned_cols=35 Identities=17% Similarity=0.275 Sum_probs=31.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 220 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~ 220 (371)
...+|+|+|+|++|...+..+-.+|.++++.++.+
T Consensus 20 ~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 20 RSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred HhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 45789999999999999999999999999999765
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >TIGR00477 tehB tellurite resistance protein TehB | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.17 Score=43.32 Aligned_cols=98 Identities=17% Similarity=0.193 Sum_probs=57.7
Q ss_pred hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCcEEecCCCCCchHHHHHHhhcCC
Q 017431 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~g 255 (371)
......++.+||-+|+| .|..++.+++ .|. .|++++.+++-.+.+++ .+........ +... ... .+
T Consensus 24 ~~~~~~~~~~vLDiGcG-~G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~v~~~~~----d~~~--~~~-~~ 93 (195)
T TIGR00477 24 EAVKTVAPCKTLDLGCG-QGRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLPLRTDAY----DINA--AAL-NE 93 (195)
T ss_pred HHhccCCCCcEEEeCCC-CCHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCCceeEec----cchh--ccc-cC
Confidence 33444456788888875 4566666666 477 89999999876665543 2322111000 1100 011 23
Q ss_pred CccEEEEccC-----C---HHHHHHHHHHhccCCceEEEEc
Q 017431 256 GVDYSFECIG-----N---VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 256 g~dvvid~~g-----~---~~~~~~~~~~l~~~~G~iv~~g 288 (371)
.+|+|+.... . ...++.+.+.|+++ |.++.+.
T Consensus 94 ~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~~ 133 (195)
T TIGR00477 94 DYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIVA 133 (195)
T ss_pred CCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEEE
Confidence 6999986421 1 34678888899997 9865553
|
Part of a tellurite-reducing operon tehA and tehB |
| >PRK07340 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.13 Score=47.44 Aligned_cols=95 Identities=15% Similarity=0.075 Sum_probs=63.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHH-HcCCCeEEEEcCChhhHH-HHHhcCCc--EEecCCCCCchHHHHHHhhcCCCccEE
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAK-AAGASRVIGIDIDPKKFD-RAKNFGVT--EFVNPKDHDKPIQQVLVDLTDGGVDYS 260 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~-~~g~~~v~~v~~~~~~~~-~~~~~g~~--~vi~~~~~~~~~~~~~~~~~~gg~dvv 260 (371)
....+++|+|+|..|.+.+..+. ..+.++|.+.+++.++.+ ++.++... .+. . .+..+.+ .++|+|
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~----~~~~~av-----~~aDiV 192 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P----LDGEAIP-----EAVDLV 192 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E----CCHHHHh-----hcCCEE
Confidence 45678999999999999888775 468878999999987755 44444321 111 1 1233333 269999
Q ss_pred EEccCCHHHHHHHHHHhccCCceEEEEccCCC
Q 017431 261 FECIGNVSVMRAALECCHKGWGTSVIVGVAAS 292 (371)
Q Consensus 261 id~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~ 292 (371)
+.|+++..-+-.. .++++ -.+..+|.+.+
T Consensus 193 itaT~s~~Pl~~~--~~~~g-~hi~~iGs~~p 221 (304)
T PRK07340 193 VTATTSRTPVYPE--AARAG-RLVVAVGAFTP 221 (304)
T ss_pred EEccCCCCceeCc--cCCCC-CEEEecCCCCC
Confidence 9988875422222 36785 78888887643
|
|
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.2 Score=47.60 Aligned_cols=35 Identities=29% Similarity=0.259 Sum_probs=32.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 220 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~ 220 (371)
.+.+|+|+|+|++|..++..+...|.++++.++.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 56789999999999999999999999999999887
|
|
| >PRK14103 trans-aconitate 2-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.50 E-value=0.5 Score=42.26 Aligned_cols=97 Identities=16% Similarity=0.159 Sum_probs=66.3
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhc-CC
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT-DG 255 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~-g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~-~g 255 (371)
+.......++++||=+|+|. |..+..+++.. +. +|++++.+++-.+.+++.+...+. .+. .+.. .+
T Consensus 21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~------~d~----~~~~~~~ 88 (255)
T PRK14103 21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART------GDV----RDWKPKP 88 (255)
T ss_pred HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE------cCh----hhCCCCC
Confidence 34555667889999888863 66677777775 55 899999999888888776543221 111 1112 23
Q ss_pred CccEEEEccC-----C-HHHHHHHHHHhccCCceEEEE
Q 017431 256 GVDYSFECIG-----N-VSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 256 g~dvvid~~g-----~-~~~~~~~~~~l~~~~G~iv~~ 287 (371)
.||+|+.... . ...+..+.+.|+++ |.++..
T Consensus 89 ~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~ 125 (255)
T PRK14103 89 DTDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ 125 (255)
T ss_pred CceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence 7999997432 2 34578889999997 998764
|
|
| >PRK08300 acetaldehyde dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.50 E-value=0.45 Score=43.46 Aligned_cols=93 Identities=20% Similarity=0.272 Sum_probs=55.6
Q ss_pred CEEEEEcCChHHHH-HHHHHHHcCCCeEEEEcCChh--hHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 188 SIVAVFGLGTVGLA-VAEGAKAAGASRVIGIDIDPK--KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 188 ~~VlI~Gag~vG~~-ai~la~~~g~~~v~~v~~~~~--~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
-+|.|+|+|.+|.. +..+.+.-+.+-+.+++.+++ .+++++++|....+ .++...+....-..+|+||+++
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~Gi~~~~------~~ie~LL~~~~~~dIDiVf~AT 78 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRLGVATSA------EGIDGLLAMPEFDDIDIVFDAT 78 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHcCCCccc------CCHHHHHhCcCCCCCCEEEECC
Confidence 47889999999986 555555446634444555554 34667788864322 2233333321112699999999
Q ss_pred CCHHHHHHHHHHhccCCceEEEE
Q 017431 265 GNVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 265 g~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
+.....+.+.+++..| -.+++.
T Consensus 79 ~a~~H~e~a~~a~eaG-k~VID~ 100 (302)
T PRK08300 79 SAGAHVRHAAKLREAG-IRAIDL 100 (302)
T ss_pred CHHHHHHHHHHHHHcC-CeEEEC
Confidence 9865556666655553 444444
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=94.49 E-value=0.22 Score=44.37 Aligned_cols=78 Identities=19% Similarity=0.144 Sum_probs=46.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhhHH----HHHhcCCcE-E--ecCCCCCchHHHHHHhhcC--C
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFD----RAKNFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~-~~~~~~~----~~~~~g~~~-v--i~~~~~~~~~~~~~~~~~~--g 255 (371)
++++||+|+ |.+|...++.+...|+ +|+.+. ++.++.+ .++..+... . .|..+ .......+.+... +
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD-LPEGAQALDKLIQRLG 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 568999988 8999999999999999 776664 3444332 223344322 2 23222 1222222222221 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
.+|+++.+.|.
T Consensus 80 ~id~li~~ag~ 90 (256)
T PRK12743 80 RIDVLVNNAGA 90 (256)
T ss_pred CCCEEEECCCC
Confidence 68999998874
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.43 E-value=0.66 Score=41.10 Aligned_cols=104 Identities=19% Similarity=0.173 Sum_probs=59.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhhHH-HHH---hcCCcEE---ecCCCC--CchHHHHHHh---
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFD-RAK---NFGVTEF---VNPKDH--DKPIQQVLVD--- 251 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~-~~~~~~~-~~~---~~g~~~v---i~~~~~--~~~~~~~~~~--- 251 (371)
.++++||+|+ |++|.+.++.+...|+ +|+.+. +.+++.+ ... +.+.... .|..+. -..+.+.+.+
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 81 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence 4689999988 8999999999989999 677653 4434332 222 2232211 122221 0112222222
Q ss_pred -hcC-CCccEEEEccCCH----------H---------------HHHHHHHHhccCCceEEEEccCC
Q 017431 252 -LTD-GGVDYSFECIGNV----------S---------------VMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 252 -~~~-gg~dvvid~~g~~----------~---------------~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
..+ +++|+++++.|.. + +.+.++..+... |++|.+++..
T Consensus 82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-g~iv~isS~~ 147 (252)
T PRK12747 82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN-SRIINISSAA 147 (252)
T ss_pred hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC-CeEEEECCcc
Confidence 112 2799999988731 0 133456666775 9999987653
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=94.43 E-value=0.21 Score=51.38 Aligned_cols=114 Identities=23% Similarity=0.334 Sum_probs=69.4
Q ss_pred ceeeeEEecccceEecCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc
Q 017431 140 TFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID 218 (371)
Q Consensus 140 ~~a~~~~v~~~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~ 218 (371)
+...|..+++...+.+ +..+.+++=.-..+ ....-.++++||+|+ |++|.+.++.+...|+ +|++++
T Consensus 378 ~~~~~~~~~~~~~f~~-eyw~~e~~kl~~~~----------~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~ 445 (676)
T TIGR02632 378 AVSEYVSLPEQEAFDI-EYWPLEEAKLRRMP----------KEKTLARRVAFVTGGAGGIGRETARRLAAEGA-HVVLAD 445 (676)
T ss_pred cccceecCchhhccch-hhhhhhHHhhccCC----------CCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEe
Confidence 4466777777777777 66666666432111 011224789999988 9999999988888899 899998
Q ss_pred CChhhHHHHH-h----cCCcE----EecCCCCCchHHHHHHhhc--CCCccEEEEccCC
Q 017431 219 IDPKKFDRAK-N----FGVTE----FVNPKDHDKPIQQVLVDLT--DGGVDYSFECIGN 266 (371)
Q Consensus 219 ~~~~~~~~~~-~----~g~~~----vi~~~~~~~~~~~~~~~~~--~gg~dvvid~~g~ 266 (371)
++.++.+.+. + .+... ..|..+ .......+.+.. -+++|++++++|.
T Consensus 446 r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd-~~~v~~a~~~i~~~~g~iDilV~nAG~ 503 (676)
T TIGR02632 446 LNLEAAEAVAAEINGQFGAGRAVALKMDVTD-EQAVKAAFADVALAYGGVDIVVNNAGI 503 (676)
T ss_pred CCHHHHHHHHHHHHhhcCCCcEEEEECCCCC-HHHHHHHHHHHHHhcCCCcEEEECCCC
Confidence 8876554332 2 23211 123222 122333333322 2379999998874
|
|
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=94.41 E-value=0.26 Score=41.34 Aligned_cols=33 Identities=24% Similarity=0.325 Sum_probs=29.3
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
+|+|+|+|++|...++.+-..|.++++.++.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 489999999999999988889998899998775
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.41 E-value=0.34 Score=45.70 Aligned_cols=79 Identities=24% Similarity=0.275 Sum_probs=46.1
Q ss_pred CCCCEEEEEcC-ChHHHH--HHHHHHHcCCCeEEEEcCChh--h--------------HHHHHhcCCcE-Ee--cCCCCC
Q 017431 185 EPGSIVAVFGL-GTVGLA--VAEGAKAAGASRVIGIDIDPK--K--------------FDRAKNFGVTE-FV--NPKDHD 242 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~--ai~la~~~g~~~v~~v~~~~~--~--------------~~~~~~~g~~~-vi--~~~~~~ 242 (371)
..++++||+|+ +++|++ ..+.+ ..|+ ++++++...+ + .+.+++.|... .+ |..+ +
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA-~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss-~ 115 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGA-DTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFS-D 115 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCC-eEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCC-H
Confidence 44689999988 899999 34555 7899 7777753221 1 23455666532 22 2222 1
Q ss_pred chHH---HHHHhhcCCCccEEEEccCCH
Q 017431 243 KPIQ---QVLVDLTDGGVDYSFECIGNV 267 (371)
Q Consensus 243 ~~~~---~~~~~~~~gg~dvvid~~g~~ 267 (371)
.... +.+.+.. |++|+++++++.+
T Consensus 116 E~v~~lie~I~e~~-G~IDiLVnSaA~~ 142 (398)
T PRK13656 116 EIKQKVIELIKQDL-GQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHHHhc-CCCCEEEECCccC
Confidence 2222 2233322 4799999988875
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.40 E-value=0.25 Score=44.95 Aligned_cols=36 Identities=42% Similarity=0.459 Sum_probs=29.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
-+++++||+|+ +++|.+.++.+...|+ +|+.++++.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~ 40 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGV 40 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCc
Confidence 35789999988 8999998888888899 777776543
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.39 E-value=0.29 Score=44.24 Aligned_cols=104 Identities=20% Similarity=0.318 Sum_probs=62.0
Q ss_pred CCCCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChh---hHH-HHHhcCCcEE--ecCCCCCchHHHHHHhhcC
Q 017431 184 VEPGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPK---KFD-RAKNFGVTEF--VNPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 184 ~~~g~~VlI~Ga---g~vG~~ai~la~~~g~~~v~~v~~~~~---~~~-~~~~~g~~~v--i~~~~~~~~~~~~~~~~~~ 254 (371)
.-.++++||+|+ +++|.+.+..+...|+ +|+.+.++++ +.+ +.++++.... .|..+ ..+....+.+...
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~ 84 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTD-EASIDAVFETLEK 84 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCC-HHHHHHHHHHHHH
Confidence 345789999987 4899998888888999 7887766532 222 2334453222 23222 1222223333222
Q ss_pred --CCccEEEEccCCH-----------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 255 --GGVDYSFECIGNV-----------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 255 --gg~dvvid~~g~~-----------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+.+|+++++.|.. .+.+.++..+..+ |+++.+++.
T Consensus 85 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-g~Iv~iss~ 150 (272)
T PRK08159 85 KWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDG-GSILTLTYY 150 (272)
T ss_pred hcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-ceEEEEecc
Confidence 3799999987621 1233445556675 999888654
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.38 E-value=0.25 Score=44.30 Aligned_cols=79 Identities=22% Similarity=0.342 Sum_probs=47.3
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcEE--ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF--VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga---g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~v--i~~~~~~~~~~~~~~~~~~-- 254 (371)
+++++||+|+ +++|.+.++.+...|+ +|+.+.+.++..+.++ +.+.... .|..+ ..+....+.+...
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 82 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVAS-DDEINQVFADLGKHW 82 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCC-HHHHHHHHHHHHHHh
Confidence 5789999984 5899998888888999 7887765543333332 2343222 23222 1223333333222
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|++++++|.
T Consensus 83 g~iD~lVnnAG~ 94 (261)
T PRK08690 83 DGLDGLVHSIGF 94 (261)
T ss_pred CCCcEEEECCcc
Confidence 379999998764
|
|
| >TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=94.36 E-value=0.43 Score=43.35 Aligned_cols=88 Identities=24% Similarity=0.355 Sum_probs=55.7
Q ss_pred EEEEEcCChHHHHH-HHHHHHcCCCeEEEEcCChhh--HHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 189 IVAVFGLGTVGLAV-AEGAKAAGASRVIGIDIDPKK--FDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 189 ~VlI~Gag~vG~~a-i~la~~~g~~~v~~v~~~~~~--~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
+|.|+|+|.+|... ..+.+.-+.+-+.+++.++++ .++++++|....+. ++...+.+ ..+|+||++++
T Consensus 3 rVAIIG~G~IG~~h~~~ll~~~~~elvaV~d~d~es~~la~A~~~Gi~~~~~------~~e~ll~~---~dIDaV~iaTp 73 (285)
T TIGR03215 3 KVAIIGSGNIGTDLMYKLLRSEHLEMVAMVGIDPESDGLARARELGVKTSAE------GVDGLLAN---PDIDIVFDATS 73 (285)
T ss_pred EEEEEeCcHHHHHHHHHHHhCCCcEEEEEEeCCcccHHHHHHHHCCCCEEEC------CHHHHhcC---CCCCEEEECCC
Confidence 68899999999854 566665567333345555554 45677888754331 22222221 27999999999
Q ss_pred CHHHHHHHHHHhccCCceEEEE
Q 017431 266 NVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 266 ~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
.....+.+..++.. |..|..
T Consensus 74 ~~~H~e~a~~al~a--Gk~VId 93 (285)
T TIGR03215 74 AKAHARHARLLAEL--GKIVID 93 (285)
T ss_pred cHHHHHHHHHHHHc--CCEEEE
Confidence 96656666766666 454444
|
Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc. |
| >PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=94.35 E-value=0.14 Score=44.36 Aligned_cols=98 Identities=23% Similarity=0.219 Sum_probs=61.3
Q ss_pred hhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcEE-ecCCCCCchHHHHHHhhc
Q 017431 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF-VNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 179 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~v-i~~~~~~~~~~~~~~~~~ 253 (371)
.....++++++||-+|+|. |..+..+++.. . +|++++.+++..+.++ +++...+ +...+ .. ....
T Consensus 71 ~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d----~~---~~~~ 140 (212)
T PRK00312 71 TELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGD----GW---KGWP 140 (212)
T ss_pred HHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceEEEECC----cc---cCCC
Confidence 4556788999999998852 44445566553 3 8999999887665554 3344321 11111 10 0111
Q ss_pred C-CCccEEEEccCCHHHHHHHHHHhccCCceEEEE
Q 017431 254 D-GGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 254 ~-gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
. +.||+|+....-....+...+.|+++ |+++..
T Consensus 141 ~~~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~ 174 (212)
T PRK00312 141 AYAPFDRILVTAAAPEIPRALLEQLKEG-GILVAP 174 (212)
T ss_pred cCCCcCEEEEccCchhhhHHHHHhcCCC-cEEEEE
Confidence 1 37998886555556677888999997 998754
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.33 E-value=0.21 Score=45.09 Aligned_cols=36 Identities=25% Similarity=0.357 Sum_probs=30.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
+++++||+|+ |.+|...+..+...|+ +|++++++.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~ 41 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAE 41 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccc
Confidence 4679999988 9999999988888899 8888877653
|
|
| >PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA [] | Back alignment and domain information |
|---|
Probab=94.32 E-value=0.086 Score=46.76 Aligned_cols=106 Identities=19% Similarity=0.280 Sum_probs=65.2
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHH----hcCCcE--EecCCCC-CchHHHHH
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAK----NFGVTE--FVNPKDH-DKPIQQVL 249 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~v~~v~~~~~~~~~~~----~~g~~~--vi~~~~~-~~~~~~~~ 249 (371)
+....++.||++||=.|+| .|-++..+++..| -.+|+..+..+++.+.++ ..|... .+...+. ...+
T Consensus 32 I~~~l~i~pG~~VlEaGtG-SG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv~~~g~---- 106 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAGTG-SGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDVCEEGF---- 106 (247)
T ss_dssp HHHHTT--TT-EEEEE--T-TSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-GGCG------
T ss_pred HHHHcCCCCCCEEEEecCC-cHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecceecccc----
Confidence 4567889999999987664 3556667777666 348999999999877664 355532 2222221 1111
Q ss_pred HhhcCCCccEEE-EccCCHHHHHHHHHHh-ccCCceEEEEcc
Q 017431 250 VDLTDGGVDYSF-ECIGNVSVMRAALECC-HKGWGTSVIVGV 289 (371)
Q Consensus 250 ~~~~~gg~dvvi-d~~g~~~~~~~~~~~l-~~~~G~iv~~g~ 289 (371)
.+-.+..+|.|| |--.....+..+.+.| +++ |+++.+..
T Consensus 107 ~~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fsP 147 (247)
T PF08704_consen 107 DEELESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFSP 147 (247)
T ss_dssp STT-TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEES
T ss_pred cccccCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECC
Confidence 111123689666 7665566899999999 886 99998854
|
; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A. |
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=94.32 E-value=0.26 Score=43.81 Aligned_cols=101 Identities=20% Similarity=0.151 Sum_probs=59.7
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc--CCcEE-ecCCCCCchHHHHHHhhcCCCccEE
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF--GVTEF-VNPKDHDKPIQQVLVDLTDGGVDYS 260 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~--g~~~v-i~~~~~~~~~~~~~~~~~~gg~dvv 260 (371)
..+.+|||+|+ |.+|...+..+...|+ +|+++.++.++....... ++..+ .|..+ . ...+.+....++|++
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d--~--~~~l~~~~~~~~d~v 89 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTE--G--SDKLVEAIGDDSDAV 89 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCC--C--HHHHHHHhhcCCCEE
Confidence 34679999998 9999999988888898 888888877654332211 12111 23322 1 122222221269999
Q ss_pred EEccCCHH-------------HHHHHHHHhcc-CCceEEEEccC
Q 017431 261 FECIGNVS-------------VMRAALECCHK-GWGTSVIVGVA 290 (371)
Q Consensus 261 id~~g~~~-------------~~~~~~~~l~~-~~G~iv~~g~~ 290 (371)
|.+.|... ....+++.+.. +.+++|.++..
T Consensus 90 i~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 90 ICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred EECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 98876411 13344454443 22678887664
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.31 E-value=0.35 Score=42.63 Aligned_cols=37 Identities=24% Similarity=0.326 Sum_probs=31.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD 225 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~ 225 (371)
++++|+|+ |.+|...++.+...|+ +|+++++++++.+
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~ 39 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLE 39 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHH
Confidence 57999987 9999999998888899 8999988887654
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.30 E-value=0.26 Score=44.19 Aligned_cols=79 Identities=23% Similarity=0.424 Sum_probs=49.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~~--g 255 (371)
+++++||+|+ +.+|.+.+..+...|+ +|+.+.+++++.+.+ ++.+.... .|..+ .....+.+.+... +
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 86 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTD-EDGVQAMVSQIEKEVG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHhCC
Confidence 5689999988 8999998888888899 788888877654322 23343221 22222 1222222222221 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
.+|+++++.|.
T Consensus 87 ~id~li~~ag~ 97 (265)
T PRK07097 87 VIDILVNNAGI 97 (265)
T ss_pred CCCEEEECCCC
Confidence 68999998874
|
|
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.2 Score=40.06 Aligned_cols=35 Identities=29% Similarity=0.416 Sum_probs=29.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
..+|+|.|+|++|...+..+-..|.++++.+|.+.
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~ 36 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDI 36 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSB
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcc
Confidence 46899999999999988888888999999997654
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >PRK13255 thiopurine S-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.49 Score=41.29 Aligned_cols=100 Identities=19% Similarity=0.204 Sum_probs=59.7
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEEe---------cCCCCCchHHHHHHhh
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFV---------NPKDHDKPIQQVLVDL 252 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~vi---------~~~~~~~~~~~~~~~~ 252 (371)
.+.++.+||+.|+| .|.-++.||. .|+ .|++++.++...+.+ ++.+..... ..... .-+...+.++
T Consensus 34 ~~~~~~rvL~~gCG-~G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v-~~~~~D~~~l 109 (218)
T PRK13255 34 ALPAGSRVLVPLCG-KSLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEI-TIYCGDFFAL 109 (218)
T ss_pred CCCCCCeEEEeCCC-ChHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCce-EEEECcccCC
Confidence 44567899999886 5677777775 699 899999999877754 333332100 00000 0000001111
Q ss_pred c--C-CCccEEEEccC--------CHHHHHHHHHHhccCCceEEEE
Q 017431 253 T--D-GGVDYSFECIG--------NVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 253 ~--~-gg~dvvid~~g--------~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
. . +.||.|+|..- ....+..+.+.|+++ |+++.+
T Consensus 110 ~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pg-G~~~l~ 154 (218)
T PRK13255 110 TAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAG-CRGLLV 154 (218)
T ss_pred CcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCC-CeEEEE
Confidence 1 1 26899998553 134588889999997 875544
|
|
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=94.23 E-value=0.4 Score=42.13 Aligned_cols=35 Identities=34% Similarity=0.356 Sum_probs=30.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
..+|+|+|+|++|...+..+..+|.++++.+|.+.
T Consensus 21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D~ 55 (228)
T cd00757 21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDDV 55 (228)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 57999999999999999999999999999886544
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.23 E-value=0.18 Score=44.90 Aligned_cols=75 Identities=24% Similarity=0.202 Sum_probs=46.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE-EecCCCCCchHHHHHHhhc--CCCccEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLT--DGGVDYSF 261 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~~~~~~~--~gg~dvvi 261 (371)
+|+++||+|+ |++|.+.++.+...|+ +|++++++.+.. . .-.... ..|..+ .....+.+.+.. .+++|+++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~--~-~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~vi 82 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDD--L-PEGVEFVAADLTT-AEGCAAVARAVLERLGGVDILV 82 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhh--c-CCceeEEecCCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 5789999988 9999999998888899 888888765431 1 101111 122222 122222222221 13699999
Q ss_pred EccC
Q 017431 262 ECIG 265 (371)
Q Consensus 262 d~~g 265 (371)
++.|
T Consensus 83 ~~ag 86 (260)
T PRK06523 83 HVLG 86 (260)
T ss_pred ECCc
Confidence 9887
|
|
| >PRK07417 arogenate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=94.21 E-value=0.43 Score=43.32 Aligned_cols=88 Identities=16% Similarity=0.230 Sum_probs=57.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHH
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 268 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~ 268 (371)
+|.|+|.|.+|...+..++..|. .|++.++++++.+.+.+.|.... .. ... +.+ ..+|+||-|+....
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~---~~--~~~-~~~-----~~aDlVilavp~~~ 69 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDE---AS--TDL-SLL-----KDCDLVILALPIGL 69 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCccc---cc--CCH-hHh-----cCCCEEEEcCCHHH
Confidence 58899999999988888888898 89999999988888877765211 11 111 111 25899999988643
Q ss_pred H---HHHHHHHhccCCceEEEEcc
Q 017431 269 V---MRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 269 ~---~~~~~~~l~~~~G~iv~~g~ 289 (371)
. ++.....+.++ ..+..+++
T Consensus 70 ~~~~~~~l~~~l~~~-~ii~d~~S 92 (279)
T PRK07417 70 LLPPSEQLIPALPPE-AIVTDVGS 92 (279)
T ss_pred HHHHHHHHHHhCCCC-cEEEeCcc
Confidence 2 23333334443 44444443
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.20 E-value=0.26 Score=44.34 Aligned_cols=76 Identities=20% Similarity=0.240 Sum_probs=47.0
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhc--CCCcc
Q 017431 189 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGVD 258 (371)
Q Consensus 189 ~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~--~gg~d 258 (371)
+|||+|+ |.+|...+..+...|+ +|+.++++.++.+.+ ++.+.... .|..+ .....+.+.... .+++|
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~id 79 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRD-YSQLTALAQACEEKWGGID 79 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence 6899988 9999998888888899 888888877654422 22333221 12222 122222222221 13799
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
+++++.|.
T Consensus 80 ~lI~~ag~ 87 (270)
T PRK05650 80 VIVNNAGV 87 (270)
T ss_pred EEEECCCC
Confidence 99998874
|
|
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.44 Score=44.77 Aligned_cols=97 Identities=16% Similarity=0.225 Sum_probs=57.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC-----cEEecCCCCCchHHHHHHhhcCCCccE
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV-----TEFVNPKDHDKPIQQVLVDLTDGGVDY 259 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~-----~~vi~~~~~~~~~~~~~~~~~~gg~dv 259 (371)
-.|++|.|+|.|.+|...++.++.+|+ +|++.+++..+... ..++. ...........++.+.+. ..|+
T Consensus 157 l~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~ell~-----~aDi 229 (347)
T PLN02928 157 LFGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSWTSEPE-DGLLIPNGDVDDLVDEKGGHEDIYEFAG-----EADI 229 (347)
T ss_pred CCCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCChhhh-hhhccccccccccccccCcccCHHHHHh-----hCCE
Confidence 468999999999999999999999999 99999876332111 11100 000000000022333322 3788
Q ss_pred EEEccCC-HHH----HHHHHHHhccCCceEEEEcc
Q 017431 260 SFECIGN-VSV----MRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 260 vid~~g~-~~~----~~~~~~~l~~~~G~iv~~g~ 289 (371)
|+.++.. +++ -...+..|+++ ..+|.++.
T Consensus 230 Vvl~lPlt~~T~~li~~~~l~~Mk~g-a~lINvaR 263 (347)
T PLN02928 230 VVLCCTLTKETAGIVNDEFLSSMKKG-ALLVNIAR 263 (347)
T ss_pred EEECCCCChHhhcccCHHHHhcCCCC-eEEEECCC
Confidence 8876653 111 24566777775 77777654
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.14 E-value=0.22 Score=44.08 Aligned_cols=41 Identities=24% Similarity=0.250 Sum_probs=34.3
Q ss_pred CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 017431 183 KVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKF 224 (371)
Q Consensus 183 ~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~ 224 (371)
...++++|||+|+ |.+|...++.+...|+ +|++++++.++.
T Consensus 8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~ 49 (247)
T PRK08945 8 DLLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKL 49 (247)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHH
Confidence 3457889999988 9999998888888899 888898887654
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.09 E-value=0.28 Score=43.68 Aligned_cols=79 Identities=19% Similarity=0.259 Sum_probs=49.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcE-E--ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~~~~~~~--g 255 (371)
.+++|||+|+ +.+|...+..+...|+ +++.++++.++.+.+ ++.+... . .|..+ .....+.+.+... +
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~ 87 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS-EQELSALADFALSKLG 87 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4789999988 9999999998888999 788887776654332 2233322 1 23332 1222222322221 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|+++++.+.
T Consensus 88 ~~d~li~~ag~ 98 (255)
T PRK06113 88 KVDILVNNAGG 98 (255)
T ss_pred CCCEEEECCCC
Confidence 78999998873
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.06 E-value=0.31 Score=46.73 Aligned_cols=74 Identities=24% Similarity=0.305 Sum_probs=47.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCC-cEE--ecCCCCCchHHHHHHhhcCCCccEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV-TEF--VNPKDHDKPIQQVLVDLTDGGVDYS 260 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~-~~v--i~~~~~~~~~~~~~~~~~~gg~dvv 260 (371)
++++|+|+|+ |++|.+.+..+...|+ +|+++++++++.+.. .+.+. ... .|..+ . +.+.+.. +++|++
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd--~---~~v~~~l-~~IDiL 249 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVGQ--E---AALAELL-EKVDIL 249 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCC--H---HHHHHHh-CCCCEE
Confidence 4689999988 9999999888888899 888888876654322 11111 111 22222 1 2233322 369999
Q ss_pred EEccCC
Q 017431 261 FECIGN 266 (371)
Q Consensus 261 id~~g~ 266 (371)
+++.|.
T Consensus 250 InnAGi 255 (406)
T PRK07424 250 IINHGI 255 (406)
T ss_pred EECCCc
Confidence 987764
|
|
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=94.06 E-value=0.32 Score=45.84 Aligned_cols=36 Identities=31% Similarity=0.296 Sum_probs=32.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
.+.+|||+|+|++|..+++.+-..|.++++.++.+.
T Consensus 27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 457999999999999999999999999999998765
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.03 E-value=0.35 Score=40.38 Aligned_cols=92 Identities=22% Similarity=0.333 Sum_probs=59.9
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCc--EEecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 189 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT--EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 189 ~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
+|.|+|| |-+|...++=|+..|. .|+++.++++|....+...+. .+++... .. ..+ .|+|+||++.+
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~~i~q~Difd~~~----~a---~~l--~g~DaVIsA~~ 71 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGVTILQKDIFDLTS----LA---SDL--AGHDAVISAFG 71 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccceeecccccChhh----hH---hhh--cCCceEEEecc
Confidence 5788888 9999999999999999 899999999987543222110 1222111 10 111 27999999887
Q ss_pred CH---------HHHHHHHHHhcc-CCceEEEEccC
Q 017431 266 NV---------SVMRAALECCHK-GWGTSVIVGVA 290 (371)
Q Consensus 266 ~~---------~~~~~~~~~l~~-~~G~iv~~g~~ 290 (371)
.. ...+.++..|+. +--|+..+|..
T Consensus 72 ~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGA 106 (211)
T COG2910 72 AGASDNDELHSKSIEALIEALKGAGVPRLLVVGGA 106 (211)
T ss_pred CCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCc
Confidence 63 124446666665 22478888764
|
|
| >PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.00 E-value=0.37 Score=43.58 Aligned_cols=95 Identities=20% Similarity=0.197 Sum_probs=64.0
Q ss_pred hccccchhhhhhhhhcCCCCCCCEEEEEcCC-hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCch
Q 017431 166 LLGCGVPTGLGAVWNTAKVEPGSIVAVFGLG-TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKP 244 (371)
Q Consensus 166 ~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag-~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~ 244 (371)
.+||+....+..|....---.|++|+|+|.| .+|.-...++...|+ .|+.+.+. + .+
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~a-tVt~~hs~-------------------t--~~ 194 (285)
T PRK14189 137 FRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGA-TVTICHSK-------------------T--RD 194 (285)
T ss_pred CcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEecCC-------------------C--CC
Confidence 3455544444433222223479999999995 569999999999999 77775321 1 22
Q ss_pred HHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 245 IQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 245 ~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+.+.++ .+|+++.++|.+..+.. ..++++ ..+|.+|..
T Consensus 195 l~~~~~-----~ADIVV~avG~~~~i~~--~~ik~g-avVIDVGin 232 (285)
T PRK14189 195 LAAHTR-----QADIVVAAVGKRNVLTA--DMVKPG-ATVIDVGMN 232 (285)
T ss_pred HHHHhh-----hCCEEEEcCCCcCccCH--HHcCCC-CEEEEcccc
Confidence 222222 48999999999876554 778996 899999864
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.00 E-value=0.37 Score=43.30 Aligned_cols=78 Identities=19% Similarity=0.296 Sum_probs=46.6
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCcEE--ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGLG---TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEF--VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Gag---~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~~v--i~~~~~~~~~~~~~~~~~~-- 254 (371)
+++++||+|++ ++|.+.++.+...|+ +|+.++++++..+.+++ .+.... .|..+ ..+....+.+...
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~ 82 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAE-DASIDAMFAELGKVW 82 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCC-HHHHHHHHHHHHhhc
Confidence 57899999883 799998888888899 78877776422222322 232222 23322 1223333333222
Q ss_pred CCccEEEEccC
Q 017431 255 GGVDYSFECIG 265 (371)
Q Consensus 255 gg~dvvid~~g 265 (371)
+.+|++++++|
T Consensus 83 g~iD~linnAg 93 (262)
T PRK07984 83 PKFDGFVHSIG 93 (262)
T ss_pred CCCCEEEECCc
Confidence 36999999887
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.99 E-value=0.23 Score=46.17 Aligned_cols=93 Identities=16% Similarity=0.179 Sum_probs=59.8
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHH-HcCCCeEEEEcCChhhHHHHH-hcCCcEEecCCCCCchHHHHHHhhcCCCccEEE
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAK-AAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSF 261 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~-~~g~~~v~~v~~~~~~~~~~~-~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvi 261 (371)
-.+++|+|+|| |.+|..+++.+. ..|+.+++.+.+++++.+.+. +++...+ .++.+.+ ..+|+|+
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i-------~~l~~~l-----~~aDiVv 220 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKI-------LSLEEAL-----PEADIVV 220 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccH-------HhHHHHH-----ccCCEEE
Confidence 46789999999 899998887775 457778999988877666543 3431111 1122111 1599999
Q ss_pred EccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 262 ECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 262 d~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
.+++.+.....-...+.++ -.+++++.+
T Consensus 221 ~~ts~~~~~~I~~~~l~~~-~~viDiAvP 248 (340)
T PRK14982 221 WVASMPKGVEIDPETLKKP-CLMIDGGYP 248 (340)
T ss_pred ECCcCCcCCcCCHHHhCCC-eEEEEecCC
Confidence 9988754321222445664 677777664
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.96 E-value=0.26 Score=43.53 Aligned_cols=79 Identities=18% Similarity=0.268 Sum_probs=47.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEE-EcCChhhHHH----HHhcCCcEE---ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIG-IDIDPKKFDR----AKNFGVTEF---VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~-v~~~~~~~~~----~~~~g~~~v---i~~~~~~~~~~~~~~~~~~-- 254 (371)
+++++||+|+ |.+|...+..+...|+ +|+. ..++.++.+. +++.+.... .|..+ ..+....+.+...
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 80 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGD-VEKIKEMFAQIDEEF 80 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4679999988 9999999999999999 6555 4555554322 223343222 22222 1222233333222
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|+++++.|.
T Consensus 81 ~~id~vi~~ag~ 92 (250)
T PRK08063 81 GRLDVFVNNAAS 92 (250)
T ss_pred CCCCEEEECCCC
Confidence 368999998874
|
|
| >KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.96 E-value=0.34 Score=44.24 Aligned_cols=57 Identities=18% Similarity=0.155 Sum_probs=46.9
Q ss_pred hhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC---ChhhHHHHHhcCCcEEe
Q 017431 179 WNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI---DPKKFDRAKNFGVTEFV 236 (371)
Q Consensus 179 ~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~---~~~~~~~~~~~g~~~vi 236 (371)
...+.+.||.++||-.. |.+|++..-+|...|+ +++++.. +.+|...++.||+..+.
T Consensus 95 e~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gy-k~i~tmP~~ms~Ek~~~l~a~Gaeii~ 155 (362)
T KOG1252|consen 95 EKKGLITPGKSTLIEPTSGNTGIGLAYMAALRGY-KCIITMPEKMSKEKRILLRALGAEIIL 155 (362)
T ss_pred HHcCCccCCceEEEecCCCchHHHHHHHHHHcCc-eEEEEechhhhHHHHHHHHHcCCEEEe
Confidence 35678999999999987 8899999999999999 7777744 44788889999986543
|
|
| >PRK13403 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=93.93 E-value=0.78 Score=42.23 Aligned_cols=86 Identities=21% Similarity=0.225 Sum_probs=58.4
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
.-+|++|.|+|-|.+|.+.++.++..|. +|++..+.....+.++..|.. +. +..+.+. ..|+|+-+
T Consensus 13 ~LkgKtVGIIG~GsIG~amA~nL~d~G~-~ViV~~r~~~s~~~A~~~G~~-v~-------sl~Eaak-----~ADVV~ll 78 (335)
T PRK13403 13 LLQGKTVAVIGYGSQGHAQAQNLRDSGV-EVVVGVRPGKSFEVAKADGFE-VM-------SVSEAVR-----TAQVVQML 78 (335)
T ss_pred hhCcCEEEEEeEcHHHHHHHHHHHHCcC-EEEEEECcchhhHHHHHcCCE-EC-------CHHHHHh-----cCCEEEEe
Confidence 4468999999999999999999999999 787776655555566666652 11 1222222 48999988
Q ss_pred cCCHHH---H-HHHHHHhccCCceE
Q 017431 264 IGNVSV---M-RAALECCHKGWGTS 284 (371)
Q Consensus 264 ~g~~~~---~-~~~~~~l~~~~G~i 284 (371)
+..+.. + ...+..|+++ ..+
T Consensus 79 LPd~~t~~V~~~eil~~MK~G-aiL 102 (335)
T PRK13403 79 LPDEQQAHVYKAEVEENLREG-QML 102 (335)
T ss_pred CCChHHHHHHHHHHHhcCCCC-CEE
Confidence 876432 2 2355566674 443
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=93.92 E-value=0.34 Score=42.53 Aligned_cols=79 Identities=24% Similarity=0.312 Sum_probs=46.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-hHH-H---HHhcCCcE-Ee--cCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KFD-R---AKNFGVTE-FV--NPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~-~~~-~---~~~~g~~~-vi--~~~~~~~~~~~~~~~~~~-- 254 (371)
+++++||+|+ |.+|...+..+...|+ +|+++.++.+ +.+ . ++..+... .+ |..+ ...+.+.+.+...
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 81 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD-AESVERAVDEAKAEF 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4578999988 9999999999999999 6655555443 222 2 22223222 22 3322 1222222333222
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|.++.+.|.
T Consensus 82 ~~id~vi~~ag~ 93 (248)
T PRK05557 82 GGVDILVNNAGI 93 (248)
T ss_pred CCCCEEEECCCc
Confidence 268999998874
|
|
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=93.91 E-value=0.39 Score=45.46 Aligned_cols=35 Identities=29% Similarity=0.389 Sum_probs=31.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 220 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~ 220 (371)
.+.+|||+|+|++|..++..+...|.++++.++.+
T Consensus 40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 45789999999999999999999999999999876
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.90 E-value=0.2 Score=44.86 Aligned_cols=76 Identities=21% Similarity=0.290 Sum_probs=47.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE-EecCCCCCchHHHHHHhhcC--CCccEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTD--GGVDYSF 261 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~~~~~~~~--gg~dvvi 261 (371)
+++++||+|+ |.+|.+.++.+...|+ +|+.+++++++.+. ..... ..|..+ .......+.+... +.+|+++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id~li 82 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSS-AEEVNHTVAEIIEKFGRIDGLV 82 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 4688999987 9999999999989999 88888776654321 11111 123332 1223333333221 3789999
Q ss_pred EccCC
Q 017431 262 ECIGN 266 (371)
Q Consensus 262 d~~g~ 266 (371)
++.|.
T Consensus 83 ~~Ag~ 87 (266)
T PRK06171 83 NNAGI 87 (266)
T ss_pred ECCcc
Confidence 98873
|
|
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=93.87 E-value=0.22 Score=49.62 Aligned_cols=71 Identities=23% Similarity=0.251 Sum_probs=47.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
.++++||+|+|++|.+++..+...|+ +|+++.++.++.+.+ .+++.. .+...+ + .+......|++++|+
T Consensus 378 ~~k~vlIlGaGGagrAia~~L~~~G~-~V~i~nR~~e~a~~la~~l~~~-~~~~~~----~----~~~~~~~~diiINtT 447 (529)
T PLN02520 378 AGKLFVVIGAGGAGKALAYGAKEKGA-RVVIANRTYERAKELADAVGGQ-ALTLAD----L----ENFHPEEGMILANTT 447 (529)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCc-eeeHhH----h----hhhccccCeEEEecc
Confidence 46789999999999999999999999 899998887765544 455431 221111 1 111112578999877
Q ss_pred CC
Q 017431 265 GN 266 (371)
Q Consensus 265 g~ 266 (371)
+-
T Consensus 448 ~v 449 (529)
T PLN02520 448 SV 449 (529)
T ss_pred cC
Confidence 54
|
|
| >PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated | Back alignment and domain information |
|---|
Probab=93.86 E-value=0.81 Score=38.71 Aligned_cols=97 Identities=21% Similarity=0.278 Sum_probs=60.9
Q ss_pred hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCcE--EecCCCCCchHHHHHHhhc
Q 017431 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~~--vi~~~~~~~~~~~~~~~~~ 253 (371)
....+.++++||=+|+|. |..++.+++.....+|++++.+++..+.+++ ++... ++. .+ ... ..
T Consensus 25 ~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~-~d----~~~----~~ 94 (187)
T PRK08287 25 SKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIP-GE----API----EL 94 (187)
T ss_pred HhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEe-cC----chh----hc
Confidence 445567888988888753 6666666766543389999999987666643 34322 221 11 111 11
Q ss_pred CCCccEEEEccCC---HHHHHHHHHHhccCCceEEEE
Q 017431 254 DGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 254 ~gg~dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~ 287 (371)
.+.+|+++..... ...++.+.+.|+++ |+++..
T Consensus 95 ~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~ 130 (187)
T PRK08287 95 PGKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLT 130 (187)
T ss_pred CcCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEE
Confidence 2379999864321 34578889999997 998764
|
|
| >PTZ00098 phosphoethanolamine N-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=93.83 E-value=0.3 Score=43.95 Aligned_cols=103 Identities=20% Similarity=0.261 Sum_probs=66.2
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCc--EE-ecCCCCCchHHHHHHhhcC
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT--EF-VNPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~--~v-i~~~~~~~~~~~~~~~~~~ 254 (371)
+....++.++.+||=+|+| .|..+..+++..++ +|++++.+++..+.+++.... .+ +...+ ... ....+
T Consensus 44 ~l~~l~l~~~~~VLDiGcG-~G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D----~~~--~~~~~ 115 (263)
T PTZ00098 44 ILSDIELNENSKVLDIGSG-LGGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEAND----ILK--KDFPE 115 (263)
T ss_pred HHHhCCCCCCCEEEEEcCC-CChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEECC----ccc--CCCCC
Confidence 4456778899999988886 35556677777788 899999999877777653221 11 11111 100 01112
Q ss_pred CCccEEEEc--c---C---CHHHHHHHHHHhccCCceEEEEcc
Q 017431 255 GGVDYSFEC--I---G---NVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 255 gg~dvvid~--~---g---~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
+.||+|+.. . + ...+++.+.+.|+++ |+++....
T Consensus 116 ~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~ 157 (263)
T PTZ00098 116 NTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDY 157 (263)
T ss_pred CCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 369999862 1 1 134678889999997 99987654
|
|
| >COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.83 E-value=0.25 Score=46.57 Aligned_cols=59 Identities=25% Similarity=0.252 Sum_probs=41.5
Q ss_pred cchhhhccccchhhhhhhhhcCCC-CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKV-EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~-~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
..+|.+..+.+.+- .++ ...+. -+|.+|.|.|.|.+|..+++.+..+|+ +|++++.+..
T Consensus 182 r~~aTg~Gv~~~~~-~a~-~~~g~~l~G~rVaVQG~GNVg~~aa~~l~~~GA-kvva~sds~g 241 (411)
T COG0334 182 RSEATGYGVFYAIR-EAL-KALGDDLEGARVAVQGFGNVGQYAAEKLHELGA-KVVAVSDSKG 241 (411)
T ss_pred CCcccceehHHHHH-HHH-HHcCCCcCCCEEEEECccHHHHHHHHHHHHcCC-EEEEEEcCCC
Confidence 34454444333333 223 33333 589999999999999999999999999 8888766655
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.81 E-value=0.32 Score=42.94 Aligned_cols=79 Identities=18% Similarity=0.227 Sum_probs=46.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChh-hHHHH---HhcCCcEE---ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPK-KFDRA---KNFGVTEF---VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v-~~~~~-~~~~~---~~~g~~~v---i~~~~~~~~~~~~~~~~~~-- 254 (371)
+++++||+|+ |.+|.+.++.+...|+ +|++. .+++. ..+.+ ++.+.... .|..+ ..+..+.+.+...
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 79 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGD-WDSTKAAFDKVKAEV 79 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHh
Confidence 4678999988 9999999999999999 66664 33332 22222 23344322 23222 1222222222221
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|+++++.|.
T Consensus 80 ~~id~li~~ag~ 91 (246)
T PRK12938 80 GEIDVLVNNAGI 91 (246)
T ss_pred CCCCEEEECCCC
Confidence 379999999875
|
|
| >PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate | Back alignment and domain information |
|---|
Probab=93.77 E-value=0.38 Score=39.53 Aligned_cols=84 Identities=18% Similarity=0.155 Sum_probs=53.6
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC------cEEecC-CCCCchHHHHHHhhcCCCccEEE
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV------TEFVNP-KDHDKPIQQVLVDLTDGGVDYSF 261 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~------~~vi~~-~~~~~~~~~~~~~~~~gg~dvvi 261 (371)
+|.|+|+|..|.+....+...|. +|..-.++++..+.+++-+. ...+.. -....+..+.+ .+.|+++
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~-----~~ad~Ii 74 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEAL-----EDADIII 74 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHH-----TT-SEEE
T ss_pred CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHh-----CcccEEE
Confidence 58899999999999999999997 99999999887776654222 000000 00012343333 2589999
Q ss_pred EccCCHHHHHHHHHHhcc
Q 017431 262 ECIGNVSVMRAALECCHK 279 (371)
Q Consensus 262 d~~g~~~~~~~~~~~l~~ 279 (371)
-++.+. .++..++.+.+
T Consensus 75 iavPs~-~~~~~~~~l~~ 91 (157)
T PF01210_consen 75 IAVPSQ-AHREVLEQLAP 91 (157)
T ss_dssp E-S-GG-GHHHHHHHHTT
T ss_pred ecccHH-HHHHHHHHHhh
Confidence 988883 36666666655
|
This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A .... |
| >PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms [] | Back alignment and domain information |
|---|
Probab=93.76 E-value=0.76 Score=36.31 Aligned_cols=90 Identities=17% Similarity=0.322 Sum_probs=54.2
Q ss_pred EEEEcC-ChHHHHHHHHHHHcC--CCeEEEEcCChhh---HHHHHhcCCcEEecCCCCC-chHH----------------
Q 017431 190 VAVFGL-GTVGLAVAEGAKAAG--ASRVIGIDIDPKK---FDRAKNFGVTEFVNPKDHD-KPIQ---------------- 246 (371)
Q Consensus 190 VlI~Ga-g~vG~~ai~la~~~g--~~~v~~v~~~~~~---~~~~~~~g~~~vi~~~~~~-~~~~---------------- 246 (371)
|.|+|+ |.+|..++++.+... . +|++......- .+.+++|.+..+...++.. ..+.
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~ 79 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGP 79 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeCh
Confidence 568898 999999999999987 5 66665444332 2355678887766544310 0111
Q ss_pred HHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccC
Q 017431 247 QVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKG 280 (371)
Q Consensus 247 ~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~ 280 (371)
+.+.++... .+|+++++..+-.-+.-.+..+..+
T Consensus 80 ~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~g 114 (129)
T PF02670_consen 80 EGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAG 114 (129)
T ss_dssp HHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTT
T ss_pred HHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCC
Confidence 112233332 6888888777766677777777773
|
In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A .... |
| >PRK04266 fibrillarin; Provisional | Back alignment and domain information |
|---|
Probab=93.75 E-value=1.1 Score=39.23 Aligned_cols=102 Identities=13% Similarity=0.165 Sum_probs=60.0
Q ss_pred hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEEecCCCCCchHHHHHHhhcCC
Q 017431 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFVNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~vi~~~~~~~~~~~~~~~~~~g 255 (371)
+..++++|++||=.|+| .|..+..+++..+..+|++++.+++..+.+ ++......+..+..... ....+ ..
T Consensus 66 ~~l~i~~g~~VlD~G~G-~G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~~~~---~~~~l-~~ 140 (226)
T PRK04266 66 KNFPIKKGSKVLYLGAA-SGTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADARKPE---RYAHV-VE 140 (226)
T ss_pred hhCCCCCCCEEEEEccC-CCHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCCCcc---hhhhc-cc
Confidence 45688999999888774 233455566665534899999999765533 22211122211110000 00111 12
Q ss_pred CccEEEEccCCHH----HHHHHHHHhccCCceEEEE
Q 017431 256 GVDYSFECIGNVS----VMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 256 g~dvvid~~g~~~----~~~~~~~~l~~~~G~iv~~ 287 (371)
.+|+++.....+. +++.+.+.|+++ |+++..
T Consensus 141 ~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G~lvI~ 175 (226)
T PRK04266 141 KVDVIYQDVAQPNQAEIAIDNAEFFLKDG-GYLLLA 175 (226)
T ss_pred cCCEEEECCCChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 5999996554432 367888899997 998874
|
|
| >PLN02244 tocopherol O-methyltransferase | Back alignment and domain information |
|---|
Probab=93.74 E-value=0.21 Score=46.80 Aligned_cols=96 Identities=22% Similarity=0.299 Sum_probs=61.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCcE--EecCCCCCchHHHHHHhhcCCCcc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLVDLTDGGVD 258 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~~--vi~~~~~~~~~~~~~~~~~~gg~d 258 (371)
+++++||=+|+| .|..+..+++..|+ +|++++.++...+.+++ .+... .+...+ ..+ ....++.||
T Consensus 117 ~~~~~VLDiGCG-~G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D----~~~--~~~~~~~FD 188 (340)
T PLN02244 117 KRPKRIVDVGCG-IGGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVAD----ALN--QPFEDGQFD 188 (340)
T ss_pred CCCCeEEEecCC-CCHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcC----ccc--CCCCCCCcc
Confidence 678899888886 45667788887788 99999999987665544 23311 111111 000 011223799
Q ss_pred EEEEccCC------HHHHHHHHHHhccCCceEEEEcc
Q 017431 259 YSFECIGN------VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 259 vvid~~g~------~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
+|+..... ...+..+.+.|++| |+++....
T Consensus 189 ~V~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~~ 224 (340)
T PLN02244 189 LVWSMESGEHMPDKRKFVQELARVAAPG-GRIIIVTW 224 (340)
T ss_pred EEEECCchhccCCHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 99864332 34678899999997 99987643
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=93.73 E-value=0.27 Score=43.93 Aligned_cols=102 Identities=21% Similarity=0.299 Sum_probs=59.4
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChh------hHHHHHhcCC-cEE--ecCCCCCchHHHHHHhhc
Q 017431 186 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPK------KFDRAKNFGV-TEF--VNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 186 ~g~~VlI~Ga---g~vG~~ai~la~~~g~~~v~~v~~~~~------~~~~~~~~g~-~~v--i~~~~~~~~~~~~~~~~~ 253 (371)
+++++||+|+ +++|.+.+..+...|+ +|+.+.++.+ ..+.+++.+. ... .|..+ .....+.+.+..
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~ 82 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQD-DAQIEETFETIK 82 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCC-HHHHHHHHHHHH
Confidence 4789999986 4899998888888999 7776643322 2222222221 112 23322 122222333322
Q ss_pred C--CCccEEEEccCCH-------H----------------------HHHHHHHHhccCCceEEEEccC
Q 017431 254 D--GGVDYSFECIGNV-------S----------------------VMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 254 ~--gg~dvvid~~g~~-------~----------------------~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
. +.+|+++++.|.. . +.+.++..|..+ |+++.+++.
T Consensus 83 ~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~-g~Iv~isS~ 149 (258)
T PRK07370 83 QKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG-GSIVTLTYL 149 (258)
T ss_pred HHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC-CeEEEEecc
Confidence 2 3799999988731 0 234566677775 999988764
|
|
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=93.73 E-value=0.53 Score=46.34 Aligned_cols=69 Identities=28% Similarity=0.293 Sum_probs=48.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-----hHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEE
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-----KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYS 260 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~-----~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvv 260 (371)
.+++|+|+|+|.+|+.++.+++..|+ +|++++..+. ..+.+++.|+........ . ....+|+|
T Consensus 15 ~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~--~---------~~~~~D~V 82 (480)
T PRK01438 15 QGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGP--T---------LPEDTDLV 82 (480)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc--c---------ccCCCCEE
Confidence 46799999999999999999999999 7888875542 234456677754432221 1 01257888
Q ss_pred EEccCC
Q 017431 261 FECIGN 266 (371)
Q Consensus 261 id~~g~ 266 (371)
+-+.|-
T Consensus 83 v~s~Gi 88 (480)
T PRK01438 83 VTSPGW 88 (480)
T ss_pred EECCCc
Confidence 877765
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.70 E-value=0.42 Score=43.99 Aligned_cols=80 Identities=23% Similarity=0.301 Sum_probs=46.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hhH-HH---HHhcCCcEEecCCCC-Cc-hHHHHHHhhc-CCC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKF-DR---AKNFGVTEFVNPKDH-DK-PIQQVLVDLT-DGG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~-~~~-~~---~~~~g~~~vi~~~~~-~~-~~~~~~~~~~-~gg 256 (371)
+++++||+|+ +++|.+.++.+...|+ +|+++++.. ++. +. +++.|....+...+. +. ...+.+.... .+.
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~ 89 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGG 89 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence 5689999988 8999998888888899 788876543 222 22 233343222212121 12 1222221111 247
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|++++++|.
T Consensus 90 iD~li~nAG~ 99 (306)
T PRK07792 90 LDIVVNNAGI 99 (306)
T ss_pred CCEEEECCCC
Confidence 9999998874
|
|
| >PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.66 E-value=0.65 Score=43.24 Aligned_cols=94 Identities=19% Similarity=0.110 Sum_probs=62.2
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEe-cC------CCCCchHHHHHHhhcCCCccEE
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NP------KDHDKPIQQVLVDLTDGGVDYS 260 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi-~~------~~~~~~~~~~~~~~~~gg~dvv 260 (371)
-+|.|+|+|.+|.+....+...|. .|.+.++++++.+.+.+.+..... .. -....+..+.+ ...|+|
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~-----~~aD~V 78 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEAL-----AGADFA 78 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHH-----cCCCEE
Confidence 368999999999998888888898 899999988877666543211000 00 00001222211 258999
Q ss_pred EEccCCHHHHHHHHHHhccCCceEEEEcc
Q 017431 261 FECIGNVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 261 id~~g~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
+-++.+.. ++..++.++++ -.++.+..
T Consensus 79 i~~v~~~~-~~~v~~~l~~~-~~vi~~~~ 105 (328)
T PRK14618 79 VVAVPSKA-LRETLAGLPRA-LGYVSCAK 105 (328)
T ss_pred EEECchHH-HHHHHHhcCcC-CEEEEEee
Confidence 99999965 78888888885 66666643
|
|
| >PF13823 ADH_N_assoc: Alcohol dehydrogenase GroES-associated; PDB: 2DPH_B | Back alignment and domain information |
|---|
Probab=93.65 E-value=0.073 Score=28.17 Aligned_cols=22 Identities=27% Similarity=0.303 Sum_probs=15.9
Q ss_pred cceEEeecCCCCeEEEEeeCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPP 24 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~ 24 (371)
|||+++.++++ +.++++|.|.+
T Consensus 1 MkAv~y~G~~~-v~ve~VpdP~I 22 (23)
T PF13823_consen 1 MKAVVYHGPKD-VRVEEVPDPKI 22 (23)
T ss_dssp -EEEEEEETTE-EEEEEE----S
T ss_pred CcceEEeCCCc-eEEEECCCccc
Confidence 89999999999 99999999864
|
|
| >COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=93.62 E-value=0.91 Score=39.26 Aligned_cols=95 Identities=18% Similarity=0.160 Sum_probs=61.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP-KKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
+|++|||+|+|.+|.-=+.+....|+ +|+++.... +....+.+.+-...+. .. +... .+ .++++||-++
T Consensus 11 ~~k~VlvvGgG~va~rKa~~ll~~ga-~v~Vvs~~~~~el~~~~~~~~i~~~~-~~----~~~~--~~--~~~~lviaAt 80 (210)
T COG1648 11 EGKKVLVVGGGSVALRKARLLLKAGA-DVTVVSPEFEPELKALIEEGKIKWIE-RE----FDAE--DL--DDAFLVIAAT 80 (210)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCC-EEEEEcCCccHHHHHHHHhcCcchhh-cc----cChh--hh--cCceEEEEeC
Confidence 56899999999999999999999999 777775544 3333222222211111 11 1111 11 1489999999
Q ss_pred CCHHHHHHHHHHhccCCceEEEEccCC
Q 017431 265 GNVSVMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 265 g~~~~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
+++.+-+...+...+. +.+|...+..
T Consensus 81 ~d~~ln~~i~~~a~~~-~i~vNv~D~p 106 (210)
T COG1648 81 DDEELNERIAKAARER-RILVNVVDDP 106 (210)
T ss_pred CCHHHHHHHHHHHHHh-CCceeccCCc
Confidence 9988667777777774 8887775543
|
|
| >TIGR00138 gidB 16S rRNA methyltransferase GidB | Back alignment and domain information |
|---|
Probab=93.61 E-value=0.57 Score=39.56 Aligned_cols=91 Identities=18% Similarity=0.200 Sum_probs=55.6
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcE--EecCCCCCchHHHHHHhhcCCCccEE
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE--FVNPKDHDKPIQQVLVDLTDGGVDYS 260 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~--vi~~~~~~~~~~~~~~~~~~gg~dvv 260 (371)
+++||=+|+| .|..++.+++.....+|++++.+++..+.++ +.+... ++. .+..+ + ...+.+|+|
T Consensus 43 ~~~vLDiGcG-tG~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~-----~d~~~-~--~~~~~fD~I 113 (181)
T TIGR00138 43 GKKVIDIGSG-AGFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVN-----GRAED-F--QHEEQFDVI 113 (181)
T ss_pred CCeEEEecCC-CCccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEe-----cchhh-c--cccCCccEE
Confidence 7888888874 3455555565554348999999987655543 345432 221 11211 1 112379988
Q ss_pred EEcc-CC-HHHHHHHHHHhccCCceEEEE
Q 017431 261 FECI-GN-VSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 261 id~~-g~-~~~~~~~~~~l~~~~G~iv~~ 287 (371)
+... .. +..++.+.+.|+++ |+++..
T Consensus 114 ~s~~~~~~~~~~~~~~~~Lkpg-G~lvi~ 141 (181)
T TIGR00138 114 TSRALASLNVLLELTLNLLKVG-GYFLAY 141 (181)
T ss_pred EehhhhCHHHHHHHHHHhcCCC-CEEEEE
Confidence 8543 22 34567788889997 998866
|
GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA. |
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
Probab=93.60 E-value=0.55 Score=47.79 Aligned_cols=78 Identities=18% Similarity=0.316 Sum_probs=58.7
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCC
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 266 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~ 266 (371)
..+|+|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|...++ -+. .-.+.+++..-..+|.++-++++
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDa---t~~~~L~~agi~~A~~vvv~~~d 474 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFY-GDA---TRMDLLESAGAAKAEVLINAIDD 474 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEE-EeC---CCHHHHHhcCCCcCCEEEEEeCC
Confidence 3679999999999999999999999 899999999999999988864433 211 11223433322379999999988
Q ss_pred HHH
Q 017431 267 VSV 269 (371)
Q Consensus 267 ~~~ 269 (371)
++.
T Consensus 475 ~~~ 477 (621)
T PRK03562 475 PQT 477 (621)
T ss_pred HHH
Confidence 654
|
|
| >TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase | Back alignment and domain information |
|---|
Probab=93.60 E-value=0.7 Score=42.19 Aligned_cols=70 Identities=21% Similarity=0.269 Sum_probs=48.6
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHH
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 268 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~ 268 (371)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.... .+..+.+. ..|+||.|+....
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~~~~~~~-----~aDivi~~vp~~~ 67 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGAVTA-------ETARQVTE-----QADVIFTMVPDSP 67 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCccc-------CCHHHHHh-----cCCEEEEecCCHH
Confidence 37788999999987777778898 89999999988888777765211 11112221 4788888777644
Q ss_pred HHH
Q 017431 269 VMR 271 (371)
Q Consensus 269 ~~~ 271 (371)
.+.
T Consensus 68 ~~~ 70 (291)
T TIGR01505 68 QVE 70 (291)
T ss_pred HHH
Confidence 343
|
This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism. |
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.59 E-value=0.43 Score=41.98 Aligned_cols=35 Identities=26% Similarity=0.239 Sum_probs=29.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
.+++|||+|+ |.+|...+..+...|+ +|++++++.
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~ 40 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRS 40 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCC
Confidence 4578999988 9999998888888899 888887753
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.59 E-value=0.41 Score=42.74 Aligned_cols=78 Identities=13% Similarity=0.188 Sum_probs=46.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHH-HHHh----cCCcE-E--ecCCCCCchHHHHHHhhc--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFD-RAKN----FGVTE-F--VNPKDHDKPIQQVLVDLT-- 253 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~-~~~~~~-~~~~----~g~~~-v--i~~~~~~~~~~~~~~~~~-- 253 (371)
+++++||+|+ +++|.+.+..+...|+ +|+.+.+ ++++.+ .+++ .+... . .|..+ .....+.+.+..
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~ 84 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILE-PETYKELFKKIDED 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHh
Confidence 5789999988 9999999988888999 7777643 444332 2222 23221 1 23332 122322233222
Q ss_pred CCCccEEEEccC
Q 017431 254 DGGVDYSFECIG 265 (371)
Q Consensus 254 ~gg~dvvid~~g 265 (371)
.+.+|+++++.|
T Consensus 85 ~g~id~lv~nAg 96 (260)
T PRK08416 85 FDRVDFFISNAI 96 (260)
T ss_pred cCCccEEEECcc
Confidence 237899998875
|
|
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=93.55 E-value=0.58 Score=47.06 Aligned_cols=93 Identities=15% Similarity=0.140 Sum_probs=63.0
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCH
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 267 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~ 267 (371)
++++|.|.|.+|...++.++..|. .|++++.++++.+.+++.|...+.-... -.+.+++..-..+|.++-++++.
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~GD~~----~~~~L~~a~i~~a~~viv~~~~~ 492 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLGNAA----NEEIMQLAHLDCARWLLLTIPNG 492 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEcCCC----CHHHHHhcCccccCEEEEEcCCh
Confidence 678999999999999999999998 8999999999999999888755442211 12233333223789888777663
Q ss_pred HHH---HHHHHHhccCCceEEE
Q 017431 268 SVM---RAALECCHKGWGTSVI 286 (371)
Q Consensus 268 ~~~---~~~~~~l~~~~G~iv~ 286 (371)
... -.+.+...+. .+++.
T Consensus 493 ~~~~~iv~~~~~~~~~-~~iia 513 (558)
T PRK10669 493 YEAGEIVASAREKRPD-IEIIA 513 (558)
T ss_pred HHHHHHHHHHHHHCCC-CeEEE
Confidence 322 2233444443 45443
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.55 E-value=0.77 Score=40.27 Aligned_cols=83 Identities=22% Similarity=0.279 Sum_probs=57.2
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-H-hcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCC
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-K-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 266 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~-~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~ 266 (371)
+++|.|+|.+|...++.+...|. .|++++.++++.+.. . ++... ++.-.. .-.+.+++.--..+|+++-+++.
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~-~v~gd~---t~~~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTH-VVIGDA---TDEDVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceE-EEEecC---CCHHHHHhcCCCcCCEEEEeeCC
Confidence 68899999999999999999999 899999999987663 3 35553 332222 12234555422389999999988
Q ss_pred HHHHHHHHHHh
Q 017431 267 VSVMRAALECC 277 (371)
Q Consensus 267 ~~~~~~~~~~l 277 (371)
.. .+..+-++
T Consensus 77 d~-~N~i~~~l 86 (225)
T COG0569 77 DE-VNSVLALL 86 (225)
T ss_pred CH-HHHHHHHH
Confidence 43 44433333
|
|
| >PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2 | Back alignment and domain information |
|---|
Probab=93.53 E-value=0.32 Score=43.26 Aligned_cols=95 Identities=16% Similarity=0.171 Sum_probs=61.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCc----------EEecCCCCCchHHHHHHhhcCC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT----------EFVNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~----------~vi~~~~~~~~~~~~~~~~~~g 255 (371)
..++|||+|.|. |..+-.+++....++|.+++.+++-.+.++++-.. +++. .+-...+++ +..
T Consensus 76 ~p~~VLiiGgG~-G~~~~ell~~~~~~~i~~VEiD~~Vv~~a~~~f~~~~~~~~d~r~~i~~-----~Dg~~~l~~-~~~ 148 (246)
T PF01564_consen 76 NPKRVLIIGGGD-GGTARELLKHPPVESITVVEIDPEVVELARKYFPEFSEGLDDPRVRIII-----GDGRKFLKE-TQE 148 (246)
T ss_dssp ST-EEEEEESTT-SHHHHHHTTSTT-SEEEEEES-HHHHHHHHHHTHHHHTTGGSTTEEEEE-----STHHHHHHT-SSS
T ss_pred CcCceEEEcCCC-hhhhhhhhhcCCcceEEEEecChHHHHHHHHhchhhccccCCCceEEEE-----hhhHHHHHh-ccC
Confidence 568999998653 55566777777667999999999988888764211 1221 223333444 334
Q ss_pred -CccEEE-EccC---------CHHHHHHHHHHhccCCceEEEEc
Q 017431 256 -GVDYSF-ECIG---------NVSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 256 -g~dvvi-d~~g---------~~~~~~~~~~~l~~~~G~iv~~g 288 (371)
.+|+|+ |... +.+.++.+.++|+++ |.++.-.
T Consensus 149 ~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~~-Gv~v~~~ 191 (246)
T PF01564_consen 149 EKYDVIIVDLTDPDGPAPNLFTREFYQLCKRRLKPD-GVLVLQA 191 (246)
T ss_dssp T-EEEEEEESSSTTSCGGGGSSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred CcccEEEEeCCCCCCCcccccCHHHHHHHHhhcCCC-cEEEEEc
Confidence 799888 5443 246789999999997 9988764
|
5.1.16 from EC), spermine synthase (2.5.1.22 from EC) and putrescine N-methyltransferase (2.1.1.53 from EC) []. The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain []. The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) [].; GO: 0003824 catalytic activity; PDB: 2E5W_C 2ZSU_E 2O0L_B 2O05_B 2O06_B 2O07_B 3RW9_B 2PWP_A 2HTE_B 3RIE_B .... |
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=93.50 E-value=0.4 Score=42.45 Aligned_cols=77 Identities=18% Similarity=0.258 Sum_probs=47.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcE-E--ecCCCCCchHHHHHHhhcC--CCc
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLTD--GGV 257 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~~~~~~~--gg~ 257 (371)
+++||+|+ |.+|...++.+...|+ +|+.+.+++++.+.+ ++.+... . .|..+ .....+.+.+... +.+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~~~i 78 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD-KDQVFSAIDQAAEKFGGF 78 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcCCC
Confidence 47899988 9999999988889999 888888876544322 2334322 1 22222 1222222333221 268
Q ss_pred cEEEEccCC
Q 017431 258 DYSFECIGN 266 (371)
Q Consensus 258 dvvid~~g~ 266 (371)
|+++++.|.
T Consensus 79 d~vi~~ag~ 87 (254)
T TIGR02415 79 DVMVNNAGV 87 (254)
T ss_pred CEEEECCCc
Confidence 999998874
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=93.50 E-value=0.41 Score=39.39 Aligned_cols=80 Identities=28% Similarity=0.369 Sum_probs=57.0
Q ss_pred CCCEEEEE-cCChHHHHHHHHHHHcCCCeEEEEcCChh-hHHHHHhcCCcEEecCCCC--CchHHHHHHhhcCC--CccE
Q 017431 186 PGSIVAVF-GLGTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRAKNFGVTEFVNPKDH--DKPIQQVLVDLTDG--GVDY 259 (371)
Q Consensus 186 ~g~~VlI~-Gag~vG~~ai~la~~~g~~~v~~v~~~~~-~~~~~~~~g~~~vi~~~~~--~~~~~~~~~~~~~g--g~dv 259 (371)
+|-.-||+ |++++|.++...+...|+ .|+..+-... ..+.++++|..-++.+.+. .++...++...... ..|+
T Consensus 8 kglvalvtggasglg~ataerlakqga-sv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~ 86 (260)
T KOG1199|consen 8 KGLVALVTGGASGLGKATAERLAKQGA-SVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA 86 (260)
T ss_pred cCeeEEeecCcccccHHHHHHHHhcCc-eEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence 45566888 559999999999988999 7777766554 4568889998777765543 23344444443333 6899
Q ss_pred EEEccCC
Q 017431 260 SFECIGN 266 (371)
Q Consensus 260 vid~~g~ 266 (371)
.++|.|.
T Consensus 87 ~vncagi 93 (260)
T KOG1199|consen 87 LVNCAGI 93 (260)
T ss_pred eeeccce
Confidence 9999986
|
|
| >COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=93.48 E-value=0.81 Score=42.43 Aligned_cols=89 Identities=24% Similarity=0.317 Sum_probs=58.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEE-Ec
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSF-EC 263 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvi-d~ 263 (371)
-.|+++-|+|.|.+|.+.++.++..|+ +|+..++.+. .+..++++..++ ++.+.+. ..|++. .|
T Consensus 144 l~gktvGIiG~GrIG~avA~r~~~Fgm-~v~y~~~~~~-~~~~~~~~~~y~--------~l~ell~-----~sDii~l~~ 208 (324)
T COG1052 144 LRGKTLGIIGLGRIGQAVARRLKGFGM-KVLYYDRSPN-PEAEKELGARYV--------DLDELLA-----ESDIISLHC 208 (324)
T ss_pred CCCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCCC-hHHHhhcCceec--------cHHHHHH-----hCCEEEEeC
Confidence 458999999999999999999999999 8999988765 333344444221 1222332 267555 44
Q ss_pred cCCHHH----HHHHHHHhccCCceEEEEcc
Q 017431 264 IGNVSV----MRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 264 ~g~~~~----~~~~~~~l~~~~G~iv~~g~ 289 (371)
-..+++ -...++.|+++ +.+|-.+.
T Consensus 209 Plt~~T~hLin~~~l~~mk~g-a~lVNtaR 237 (324)
T COG1052 209 PLTPETRHLINAEELAKMKPG-AILVNTAR 237 (324)
T ss_pred CCChHHhhhcCHHHHHhCCCC-eEEEECCC
Confidence 444332 24566777775 77776654
|
|
| >cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=93.46 E-value=0.28 Score=42.76 Aligned_cols=47 Identities=32% Similarity=0.379 Sum_probs=37.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh----------hhHHHHHhcC
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP----------KKFDRAKNFG 231 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~----------~~~~~~~~~g 231 (371)
-.|.+|+|.|.|.+|..+++++..+|++.|.+++++. +..+..++.+
T Consensus 21 l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~ 77 (217)
T cd05211 21 LEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALG 77 (217)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhC
Confidence 4689999999999999999999999995566667666 5666555544
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral |
| >cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=93.46 E-value=0.6 Score=33.97 Aligned_cols=35 Identities=31% Similarity=0.434 Sum_probs=29.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI 219 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~ 219 (371)
-++++++|+|+|.+|....+.+...+..++.+.++
T Consensus 21 ~~~~~v~i~G~G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 21 LKGKTVVVLGAGEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 46789999999999999999999886557777755
|
Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al |
| >PLN02735 carbamoyl-phosphate synthase | Back alignment and domain information |
|---|
Probab=93.43 E-value=0.57 Score=50.87 Aligned_cols=99 Identities=15% Similarity=0.204 Sum_probs=59.2
Q ss_pred cccchhhhhhhhhcCCCCCCCEEEEEcCChH-----------HHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEe
Q 017431 168 GCGVPTGLGAVWNTAKVEPGSIVAVFGLGTV-----------GLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 236 (371)
Q Consensus 168 ~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~v-----------G~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi 236 (371)
..+...||.+.....+-..=++|||+|+|++ |..++.-++.+|+ .|+.+++++.....-..+ +++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~kkVLiiGsG~~~igqa~e~d~SG~q~~kaLke~G~-~Vi~vd~np~t~~~~~~~-aD~~y 81 (1102)
T PLN02735 4 ADTVTRAWSAATKAGKRTDLKKIMILGAGPIVIGQACEFDYSGTQACKALKEEGY-EVVLINSNPATIMTDPET-ADRTY 81 (1102)
T ss_pred cccceecccccccCCcccCCCEEEEECCCccccccceeecchHHHHHHHHHHcCC-EEEEEeCCcccccCChhh-CcEEE
Confidence 3455667876544433333479999999874 4558888889999 899998877532111112 34433
Q ss_pred -cCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHH
Q 017431 237 -NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAA 273 (371)
Q Consensus 237 -~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~ 273 (371)
.+.+ .+ .+.++... ++|.|+-+.|+...++.+
T Consensus 82 i~p~~--~e---~v~~ii~~e~~D~Iip~~gg~~gl~la 115 (1102)
T PLN02735 82 IAPMT--PE---LVEQVIAKERPDALLPTMGGQTALNLA 115 (1102)
T ss_pred eCCCC--HH---HHHHHHHHhCCCEEEECCCchhhHHHH
Confidence 2222 22 23332223 899999988874434433
|
|
| >PRK06522 2-dehydropantoate 2-reductase; Reviewed | Back alignment and domain information |
|---|
Probab=93.43 E-value=0.99 Score=41.32 Aligned_cols=92 Identities=16% Similarity=0.191 Sum_probs=55.7
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCC--chHHHHHHhhcCCCccEEEEccCC
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD--KPIQQVLVDLTDGGVDYSFECIGN 266 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~--~~~~~~~~~~~~gg~dvvid~~g~ 266 (371)
+|+|+|+|.+|.+....+...|. .|+.+++++++.+.+++.|... ...+.. .......... ..+|++|-|+..
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~--~~~d~vila~k~ 76 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL--EDGEITVPVLAADDPAEL--GPQDLVILAVKA 76 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc--cCCceeecccCCCChhHc--CCCCEEEEeccc
Confidence 58999999999988887777888 8999988777777666655421 000000 0000001111 369999998886
Q ss_pred HHHHHHHHHHhc----cCCceEEEE
Q 017431 267 VSVMRAALECCH----KGWGTSVIV 287 (371)
Q Consensus 267 ~~~~~~~~~~l~----~~~G~iv~~ 287 (371)
.. ++.+++.+. ++ ..++.+
T Consensus 77 ~~-~~~~~~~l~~~l~~~-~~iv~~ 99 (304)
T PRK06522 77 YQ-LPAALPSLAPLLGPD-TPVLFL 99 (304)
T ss_pred cc-HHHHHHHHhhhcCCC-CEEEEe
Confidence 43 444444443 42 456655
|
|
| >PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates | Back alignment and domain information |
|---|
Probab=93.42 E-value=1.3 Score=36.29 Aligned_cols=86 Identities=20% Similarity=0.273 Sum_probs=53.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-hHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~-~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
++++|.|+|-|..|.+-.+=+|-.|. +|++..+..+ ..+.+++-|.. + .+..+.++ ..|+|+-.+
T Consensus 3 ~~k~IAViGyGsQG~a~AlNLrDSG~-~V~Vglr~~s~s~~~A~~~Gf~-v-------~~~~eAv~-----~aDvV~~L~ 68 (165)
T PF07991_consen 3 KGKTIAVIGYGSQGHAHALNLRDSGV-NVIVGLREGSASWEKAKADGFE-V-------MSVAEAVK-----KADVVMLLL 68 (165)
T ss_dssp CTSEEEEES-SHHHHHHHHHHHHCC--EEEEEE-TTCHHHHHHHHTT-E-C-------CEHHHHHH-----C-SEEEE-S
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCC-CEEEEecCCCcCHHHHHHCCCe-e-------ccHHHHHh-----hCCEEEEeC
Confidence 57899999999999999999999999 6666555555 78888888863 1 23444443 489999888
Q ss_pred CCH---HHH-HHHHHHhccCCceEEEE
Q 017431 265 GNV---SVM-RAALECCHKGWGTSVIV 287 (371)
Q Consensus 265 g~~---~~~-~~~~~~l~~~~G~iv~~ 287 (371)
... +.. +.....|.++ ....+
T Consensus 69 PD~~q~~vy~~~I~p~l~~G--~~L~f 93 (165)
T PF07991_consen 69 PDEVQPEVYEEEIAPNLKPG--ATLVF 93 (165)
T ss_dssp -HHHHHHHHHHHHHHHS-TT---EEEE
T ss_pred ChHHHHHHHHHHHHhhCCCC--CEEEe
Confidence 762 222 4444567774 44444
|
This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C. |
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.39 E-value=0.94 Score=42.21 Aligned_cols=87 Identities=21% Similarity=0.205 Sum_probs=56.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
-.|.+|.|+|.|.+|...++.++..|. +|++.+++.+..... . . .. .++.+.+. ..|+|+-++
T Consensus 144 l~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~~~~~----~-~---~~---~~l~ell~-----~aDiVil~l 206 (330)
T PRK12480 144 VKNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNKDLDF----L-T---YK---DSVKEAIK-----DADIISLHV 206 (330)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhHhhhh----h-h---cc---CCHHHHHh-----cCCEEEEeC
Confidence 367899999999999999999999999 899998876532210 0 0 00 12222221 478888777
Q ss_pred CCHH-----HHHHHHHHhccCCceEEEEcc
Q 017431 265 GNVS-----VMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 265 g~~~-----~~~~~~~~l~~~~G~iv~~g~ 289 (371)
.... .....+..|+++ ..+|.++.
T Consensus 207 P~t~~t~~li~~~~l~~mk~g-avlIN~aR 235 (330)
T PRK12480 207 PANKESYHLFDKAMFDHVKKG-AILVNAAR 235 (330)
T ss_pred CCcHHHHHHHhHHHHhcCCCC-cEEEEcCC
Confidence 6532 134455667775 77766654
|
|
| >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=93.39 E-value=0.71 Score=37.14 Aligned_cols=95 Identities=17% Similarity=0.087 Sum_probs=62.1
Q ss_pred hccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCch
Q 017431 166 LLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKP 244 (371)
Q Consensus 166 ~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~ 244 (371)
.+|+........+....---.|++|+|+|. ..+|.-...++...|+ .|+.+.+... +
T Consensus 7 ~~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~ga-tV~~~~~~t~---------------------~ 64 (140)
T cd05212 7 FVSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGA-TVYSCDWKTI---------------------Q 64 (140)
T ss_pred ccccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeCCCCc---------------------C
Confidence 344443333333333322357999999998 7899999999999999 8888854321 1
Q ss_pred HHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 245 IQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 245 ~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+.+.++ .+|+++.++|.+..+. -+.+++| ..++.+|..
T Consensus 65 l~~~v~-----~ADIVvsAtg~~~~i~--~~~ikpG-a~Vidvg~~ 102 (140)
T cd05212 65 LQSKVH-----DADVVVVGSPKPEKVP--TEWIKPG-ATVINCSPT 102 (140)
T ss_pred HHHHHh-----hCCEEEEecCCCCccC--HHHcCCC-CEEEEcCCC
Confidence 112222 4899999999876443 4558886 777777653
|
NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional |
| >PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=93.37 E-value=0.49 Score=39.91 Aligned_cols=38 Identities=39% Similarity=0.482 Sum_probs=30.7
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 227 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~ 227 (371)
+|.|+|+|.+|...+.++-..|+ .|+..+.+++..+.+
T Consensus 1 ~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~l~~~ 38 (180)
T PF02737_consen 1 KVAVIGAGTMGRGIAALFARAGY-EVTLYDRSPEALERA 38 (180)
T ss_dssp EEEEES-SHHHHHHHHHHHHTTS-EEEEE-SSHHHHHHH
T ss_pred CEEEEcCCHHHHHHHHHHHhCCC-cEEEEECChHHHHhh
Confidence 58899999999988888888899 999999999876544
|
1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B .... |
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.37 E-value=0.44 Score=41.84 Aligned_cols=78 Identities=21% Similarity=0.275 Sum_probs=45.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH----HhcCCcE-E--ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~-~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~~~~~~~-- 254 (371)
+.++|||+|+ |.+|...++.+...|+ +|+++.+ +.+..+.+ ...+... . .|..+ ...+.+.+.+...
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~ 82 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGA-DVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTD-KAALEAAVAAAVERF 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCC-HHHHHHHHHHHHHHc
Confidence 3468999988 9999999999999999 5555444 33332222 2233221 1 22222 1223333322211
Q ss_pred CCccEEEEccC
Q 017431 255 GGVDYSFECIG 265 (371)
Q Consensus 255 gg~dvvid~~g 265 (371)
+++|+++++.|
T Consensus 83 ~~id~vi~~ag 93 (249)
T PRK12825 83 GRIDILVNNAG 93 (249)
T ss_pred CCCCEEEECCc
Confidence 37999999887
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.36 E-value=0.44 Score=42.27 Aligned_cols=77 Identities=22% Similarity=0.269 Sum_probs=46.2
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-hH-HH---HHhcCCc-EE--ecCCCCCchHHHHHHhhcC--CC
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KF-DR---AKNFGVT-EF--VNPKDHDKPIQQVLVDLTD--GG 256 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~-~~-~~---~~~~g~~-~v--i~~~~~~~~~~~~~~~~~~--gg 256 (371)
+++||+|+ |.+|...+..+...|+ +|+.+++... +. +. +++.+.. .+ .|..+ .......+.+... +.
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGF-DLAINDRPDDEELAATQQELRALGVEVIFFPADVAD-LSAHEAMLDAAQAAWGR 80 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHhcCC
Confidence 57999988 9999999988888999 7888776432 21 12 2223322 12 23322 1223333333322 36
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|+++++.|.
T Consensus 81 id~vi~~ag~ 90 (256)
T PRK12745 81 IDCLVNNAGV 90 (256)
T ss_pred CCEEEECCcc
Confidence 9999998764
|
|
| >PRK05708 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.36 E-value=0.54 Score=43.31 Aligned_cols=95 Identities=15% Similarity=0.114 Sum_probs=55.1
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc-CCcEEecCCCCCchHHHHHHhhc---CCCccEEEEc
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-GVTEFVNPKDHDKPIQQVLVDLT---DGGVDYSFEC 263 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~-g~~~vi~~~~~~~~~~~~~~~~~---~gg~dvvid~ 263 (371)
-+|+|+|+|++|....-.+...|. .|+.+.+.+++.+.+++- |.. +....+. ..+. ....+ .+.+|++|-|
T Consensus 3 m~I~IiGaGaiG~~~a~~L~~~G~-~V~lv~r~~~~~~~i~~~~Gl~-i~~~g~~-~~~~--~~~~~~~~~~~~D~viv~ 77 (305)
T PRK05708 3 MTWHILGAGSLGSLWACRLARAGL-PVRLILRDRQRLAAYQQAGGLT-LVEQGQA-SLYA--IPAETADAAEPIHRLLLA 77 (305)
T ss_pred ceEEEECCCHHHHHHHHHHHhCCC-CeEEEEechHHHHHHhhcCCeE-EeeCCcc-eeec--cCCCCcccccccCEEEEE
Confidence 369999999999876666666788 888898887777766543 432 2111110 0000 00000 1268999987
Q ss_pred cCCHH---HHHHHHHHhccCCceEEEEc
Q 017431 264 IGNVS---VMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 264 ~g~~~---~~~~~~~~l~~~~G~iv~~g 288 (371)
+=+.+ +++.+...+.++ ..++.+-
T Consensus 78 vK~~~~~~al~~l~~~l~~~-t~vv~lQ 104 (305)
T PRK05708 78 CKAYDAEPAVASLAHRLAPG-AELLLLQ 104 (305)
T ss_pred CCHHhHHHHHHHHHhhCCCC-CEEEEEe
Confidence 76533 234444445564 6666553
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=93.33 E-value=0.5 Score=42.91 Aligned_cols=75 Identities=20% Similarity=0.176 Sum_probs=44.6
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc----C---CcEE--ecCCCCCchHHHHHHhhcCC-Cc
Q 017431 190 VAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF----G---VTEF--VNPKDHDKPIQQVLVDLTDG-GV 257 (371)
Q Consensus 190 VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~----g---~~~v--i~~~~~~~~~~~~~~~~~~g-g~ 257 (371)
|||+|+ |.+|...++-+...+..+++.+++++.++-.++ ++ . .... ....+ -.-.+.+.+.... ++
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigD--vrd~~~l~~~~~~~~p 78 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGD--VRDKERLNRIFEEYKP 78 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTS--CCHHHHHHHHTT--T-
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeec--ccCHHHHHHHHhhcCC
Confidence 799987 999999888888889889999999998765543 34 1 1111 01111 2223445555555 89
Q ss_pred cEEEEccCC
Q 017431 258 DYSFECIGN 266 (371)
Q Consensus 258 dvvid~~g~ 266 (371)
|+||+++.-
T Consensus 79 diVfHaAA~ 87 (293)
T PF02719_consen 79 DIVFHAAAL 87 (293)
T ss_dssp SEEEE----
T ss_pred CEEEEChhc
Confidence 999998775
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PRK06141 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=93.32 E-value=0.77 Score=42.51 Aligned_cols=94 Identities=17% Similarity=0.100 Sum_probs=58.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHH-HcCCCeEEEEcCChhhHH-HHHhc---CCcEEecCCCCCchHHHHHHhhcCCCccE
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAK-AAGASRVIGIDIDPKKFD-RAKNF---GVTEFVNPKDHDKPIQQVLVDLTDGGVDY 259 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~-~~g~~~v~~v~~~~~~~~-~~~~~---g~~~vi~~~~~~~~~~~~~~~~~~gg~dv 259 (371)
...++|+|+|+|.+|.+.+.... ..+.++|.+..+++++.+ +++++ |.. +.... +..+.+ .++|+
T Consensus 123 ~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~-~~~~~----~~~~av-----~~aDI 192 (314)
T PRK06141 123 KDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFD-AEVVT----DLEAAV-----RQADI 192 (314)
T ss_pred CCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCc-eEEeC----CHHHHH-----hcCCE
Confidence 45688999999999999876444 467779999999888755 44444 321 11111 122222 25999
Q ss_pred EEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 260 SFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 260 vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
|+.++++..-+ .-.+.++++ -.+..+|..
T Consensus 193 Vi~aT~s~~pv-l~~~~l~~g-~~i~~ig~~ 221 (314)
T PRK06141 193 ISCATLSTEPL-VRGEWLKPG-THLDLVGNF 221 (314)
T ss_pred EEEeeCCCCCE-ecHHHcCCC-CEEEeeCCC
Confidence 99988874211 112567774 555556653
|
|
| >PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=93.30 E-value=1.1 Score=40.02 Aligned_cols=93 Identities=24% Similarity=0.269 Sum_probs=59.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCc---EEecCCCCCchHHHHHHhhcCCCc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT---EFVNPKDHDKPIQQVLVDLTDGGV 257 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~---~vi~~~~~~~~~~~~~~~~~~gg~ 257 (371)
.++.+||=+|+| .|..+..+++. |. +|++++.+++..+.+++ .|.. .++. .+.. .+.....+.|
T Consensus 43 ~~~~~vLDiGcG-~G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~-----~d~~-~l~~~~~~~f 113 (255)
T PRK11036 43 PRPLRVLDAGGG-EGQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIH-----CAAQ-DIAQHLETPV 113 (255)
T ss_pred CCCCEEEEeCCC-chHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEE-----cCHH-HHhhhcCCCC
Confidence 456788888875 46677777775 77 89999999988777654 2321 1121 1111 1222223479
Q ss_pred cEEEEcc-----CC-HHHHHHHHHHhccCCceEEEE
Q 017431 258 DYSFECI-----GN-VSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 258 dvvid~~-----g~-~~~~~~~~~~l~~~~G~iv~~ 287 (371)
|+|+... .. ...+..+.+.|+++ |.++.+
T Consensus 114 D~V~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~ 148 (255)
T PRK11036 114 DLILFHAVLEWVADPKSVLQTLWSVLRPG-GALSLM 148 (255)
T ss_pred CEEEehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEE
Confidence 9998532 22 34588999999997 998765
|
|
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=93.24 E-value=0.67 Score=47.00 Aligned_cols=94 Identities=10% Similarity=0.069 Sum_probs=66.0
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCH
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 267 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~ 267 (371)
..|+|.|.|.+|...++.++..|. .+++++.++++.+.+++.|...++- + ..-.+.+++..-..+|.++-++++.
T Consensus 401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~G-D---at~~~~L~~agi~~A~~vv~~~~d~ 475 (601)
T PRK03659 401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYYG-D---ATQLELLRAAGAEKAEAIVITCNEP 475 (601)
T ss_pred CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEEe-e---CCCHHHHHhcCCccCCEEEEEeCCH
Confidence 579999999999999999999999 8999999999999999988654332 1 1112334443223899999999986
Q ss_pred HHHHHH---HHHhccCCceEEEE
Q 017431 268 SVMRAA---LECCHKGWGTSVIV 287 (371)
Q Consensus 268 ~~~~~~---~~~l~~~~G~iv~~ 287 (371)
+..... .+...+. -+++.-
T Consensus 476 ~~n~~i~~~~r~~~p~-~~IiaR 497 (601)
T PRK03659 476 EDTMKIVELCQQHFPH-LHILAR 497 (601)
T ss_pred HHHHHHHHHHHHHCCC-CeEEEE
Confidence 543333 3444554 555543
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.24 E-value=0.5 Score=42.17 Aligned_cols=79 Identities=16% Similarity=0.148 Sum_probs=47.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hhHH----HHHhcCCcE---EecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKFD----RAKNFGVTE---FVNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~-~~~~----~~~~~g~~~---vi~~~~~~~~~~~~~~~~~~-- 254 (371)
+++++||+|+ |.+|...++.+...|+ +|+.+.++. +..+ .+++.+... ..|..+ .....+.+.+...
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~-~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~ 83 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKA-KVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTV-ESDVVNLIQTAVKEF 83 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCC-HHHHHHHHHHHHHHc
Confidence 5789999988 9999999999999999 666665533 2222 222333321 123333 1222222322222
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|+++++.|.
T Consensus 84 g~id~lv~~ag~ 95 (261)
T PRK08936 84 GTLDVMINNAGI 95 (261)
T ss_pred CCCCEEEECCCC
Confidence 379999998874
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=93.23 E-value=0.55 Score=43.44 Aligned_cols=37 Identities=22% Similarity=0.173 Sum_probs=30.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK 223 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~ 223 (371)
.|++|||+|+ |.+|...+..+...|+ +|+++.++.++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~ 41 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTD 41 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcc
Confidence 4689999988 9999999998888899 78877666554
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.22 E-value=0.81 Score=41.22 Aligned_cols=79 Identities=18% Similarity=0.146 Sum_probs=48.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcE-E--ecCCCCCchHHHHHHhhc--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLT--DG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~~~~~~--~g 255 (371)
+.+++||+|+ |.+|.+.++.+...|+ +|+++.++.++.+.+ +..+... . .|..+ .......+.+.. -+
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 86 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTD-PDSVKSFVAQAEEALG 86 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHhcC
Confidence 3468999988 9999999988888899 788887766544322 2234322 1 12222 122222232221 13
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|++|+++|.
T Consensus 87 ~id~vi~~Ag~ 97 (274)
T PRK07775 87 EIEVLVSGAGD 97 (274)
T ss_pred CCCEEEECCCc
Confidence 68999998875
|
|
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=93.19 E-value=1.4 Score=40.79 Aligned_cols=38 Identities=26% Similarity=0.301 Sum_probs=32.8
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHH
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR 226 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~ 226 (371)
++|.|+|+|.+|...++.+...|+ .|++.+.+++..+.
T Consensus 8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~ 45 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAA 45 (321)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHH
Confidence 689999999999998888888899 99999998876543
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.19 E-value=0.39 Score=42.85 Aligned_cols=79 Identities=19% Similarity=0.247 Sum_probs=47.5
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCh--hhH-HHHHhcCCc-E--EecCCCCCchHHHHHHhhc--C
Q 017431 186 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDP--KKF-DRAKNFGVT-E--FVNPKDHDKPIQQVLVDLT--D 254 (371)
Q Consensus 186 ~g~~VlI~Ga---g~vG~~ai~la~~~g~~~v~~v~~~~--~~~-~~~~~~g~~-~--vi~~~~~~~~~~~~~~~~~--~ 254 (371)
.++++||+|+ +++|.+.++.+...|+ +|+.++++. +.. +..++++.. . ..|..+ .....+.+.+.. .
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~ 83 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFGRALRLTERIAKRLPEPAPVLELDVTN-EEHLASLADRVREHV 83 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCccchhHHHHHHHhcCCCCcEEeCCCCC-HHHHHHHHHHHHHHc
Confidence 4689999985 6899998888888999 888887653 322 233344321 1 123332 122222333222 2
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|+++++.|.
T Consensus 84 g~iD~li~nAG~ 95 (256)
T PRK07889 84 DGLDGVVHSIGF 95 (256)
T ss_pred CCCcEEEEcccc
Confidence 479999997764
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.10 E-value=0.48 Score=41.64 Aligned_cols=78 Identities=22% Similarity=0.353 Sum_probs=46.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHHHHH----hcCCcE-E--ecCCCCCchHHHHHHhhcC--C
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDRAK----NFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v-~~~~~~~~~~~----~~g~~~-v--i~~~~~~~~~~~~~~~~~~--g 255 (371)
++++||+|+ |.+|...+..+...|+ +|+.+ +++.++.+.+. ..+... + .|..+ .....+.+.+... +
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 82 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSS-EEDVENLVEQIVEKFG 82 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence 468999988 9999998888778899 77777 77766543222 222212 1 22222 1222222222211 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|++|.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (247)
T PRK05565 83 KIDILVNNAGI 93 (247)
T ss_pred CCCEEEECCCc
Confidence 69999998764
|
|
| >TIGR00452 methyltransferase, putative | Back alignment and domain information |
|---|
Probab=93.07 E-value=1.3 Score=40.83 Aligned_cols=101 Identities=15% Similarity=0.114 Sum_probs=61.3
Q ss_pred hhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH---HHHhc-CC---cEEecCCCCCchHHH
Q 017431 175 LGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD---RAKNF-GV---TEFVNPKDHDKPIQQ 247 (371)
Q Consensus 175 ~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~---~~~~~-g~---~~vi~~~~~~~~~~~ 247 (371)
|..+.......+|++||=+|+|. |..+..++.. |+..|++++.++.-.. .++++ +. ..+.. . +
T Consensus 110 ~~~~l~~l~~~~g~~VLDvGCG~-G~~~~~~~~~-g~~~v~GiDpS~~ml~q~~~~~~~~~~~~~v~~~~-~----~--- 179 (314)
T TIGR00452 110 WDRVLPHLSPLKGRTILDVGCGS-GYHMWRMLGH-GAKSLVGIDPTVLFLCQFEAVRKLLDNDKRAILEP-L----G--- 179 (314)
T ss_pred HHHHHHhcCCCCCCEEEEeccCC-cHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHHHHHhccCCCeEEEE-C----C---
Confidence 33344555677889999998864 6666666654 7768999998885332 23332 21 11111 1 1
Q ss_pred HHHhhcCC-CccEEEEcc-----CC-HHHHHHHHHHhccCCceEEEE
Q 017431 248 VLVDLTDG-GVDYSFECI-----GN-VSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 248 ~~~~~~~g-g~dvvid~~-----g~-~~~~~~~~~~l~~~~G~iv~~ 287 (371)
+.++... .||+|+... .+ ...+..+.++|++| |+++.-
T Consensus 180 -ie~lp~~~~FD~V~s~gvL~H~~dp~~~L~el~r~LkpG-G~Lvle 224 (314)
T TIGR00452 180 -IEQLHELYAFDTVFSMGVLYHRKSPLEHLKQLKHQLVIK-GELVLE 224 (314)
T ss_pred -HHHCCCCCCcCEEEEcchhhccCCHHHHHHHHHHhcCCC-CEEEEE
Confidence 1222222 799998642 12 24689999999997 999864
|
Known examples to date are restricted to the proteobacteria. |
| >COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.01 E-value=2.7 Score=39.05 Aligned_cols=91 Identities=23% Similarity=0.328 Sum_probs=60.3
Q ss_pred EEEEEcCChHH-HHHHHHHHHcC--CCeEEEEcCChhhH-HHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 189 IVAVFGLGTVG-LAVAEGAKAAG--ASRVIGIDIDPKKF-DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 189 ~VlI~Gag~vG-~~ai~la~~~g--~~~v~~v~~~~~~~-~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
+|.|+|+|.++ ..-....+..+ +..+.++++++++. ++++++|..+.+ .++.+.+.. ..+|+|+-++
T Consensus 5 rvgiiG~G~~~~~~~~~~~~~~~~~~~~vav~d~~~~~a~~~a~~~~~~~~~------~~~~~ll~~---~~iD~V~Iat 75 (342)
T COG0673 5 RVGIIGAGGIAGKAHLPALAALGGGLELVAVVDRDPERAEAFAEEFGIAKAY------TDLEELLAD---PDIDAVYIAT 75 (342)
T ss_pred EEEEEcccHHHHHHhHHHHHhCCCceEEEEEecCCHHHHHHHHHHcCCCccc------CCHHHHhcC---CCCCEEEEcC
Confidence 67889997544 45566666655 44555567888774 466778875322 234333332 2599999999
Q ss_pred CCHHHHHHHHHHhccCCceEEEEccC
Q 017431 265 GNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 265 g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
......+.+.++|.. |+=|.+..+
T Consensus 76 p~~~H~e~~~~AL~a--GkhVl~EKP 99 (342)
T COG0673 76 PNALHAELALAALEA--GKHVLCEKP 99 (342)
T ss_pred CChhhHHHHHHHHhc--CCEEEEcCC
Confidence 986668888888888 566777554
|
|
| >PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot | Back alignment and domain information |
|---|
Probab=92.99 E-value=2.3 Score=32.75 Aligned_cols=88 Identities=22% Similarity=0.319 Sum_probs=59.2
Q ss_pred EEEEEcCChHHHHHHHHHHHc--CCCeEE-EEcCChhhHHH-HHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 189 IVAVFGLGTVGLAVAEGAKAA--GASRVI-GIDIDPKKFDR-AKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~--g~~~v~-~v~~~~~~~~~-~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
+|.|+|+|..|..-..-.+.. +. +++ ++++++++.+. .+++|.. .+ .++.+.+.+. .+|+|+-++
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~-~v~~v~d~~~~~~~~~~~~~~~~-~~------~~~~~ll~~~---~~D~V~I~t 70 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDF-EVVAVCDPDPERAEAFAEKYGIP-VY------TDLEELLADE---DVDAVIIAT 70 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTE-EEEEEECSSHHHHHHHHHHTTSE-EE------SSHHHHHHHT---TESEEEEES
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCc-EEEEEEeCCHHHHHHHHHHhccc-ch------hHHHHHHHhh---cCCEEEEec
Confidence 578999999998877666655 45 454 45666666554 5678876 33 2344444332 699999999
Q ss_pred CCHHHHHHHHHHhccCCceEEEEcc
Q 017431 265 GNVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 265 g~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
......+.+.+++.. |.-|.+..
T Consensus 71 p~~~h~~~~~~~l~~--g~~v~~EK 93 (120)
T PF01408_consen 71 PPSSHAEIAKKALEA--GKHVLVEK 93 (120)
T ss_dssp SGGGHHHHHHHHHHT--TSEEEEES
T ss_pred CCcchHHHHHHHHHc--CCEEEEEc
Confidence 987667777777777 45566644
|
GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A .... |
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.98 E-value=2.4 Score=36.02 Aligned_cols=86 Identities=22% Similarity=0.300 Sum_probs=51.8
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCH
Q 017431 189 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 267 (371)
Q Consensus 189 ~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~ 267 (371)
++||+|+ |++|.+.+..+... + +|+.+++++.. ...|..+ .....+.+.+. +++|+++++.|..
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~-~vi~~~r~~~~----------~~~D~~~-~~~~~~~~~~~--~~id~lv~~ag~~ 66 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-H-EVITAGRSSGD----------VQVDITD-PASIRALFEKV--GKVDAVVSAAGKV 66 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-C-cEEEEecCCCc----------eEecCCC-hHHHHHHHHhc--CCCCEEEECCCCC
Confidence 6899988 89999877766655 6 88888776431 1223332 12222323222 3688888877641
Q ss_pred -------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 268 -------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 268 -------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
.+.+.+.+.+.++ |+++.+++.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~iss~ 113 (199)
T PRK07578 67 HFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDG-GSFTLTSGI 113 (199)
T ss_pred CCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CeEEEEccc
Confidence 1234445556675 888888753
|
|
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=92.97 E-value=1.1 Score=40.96 Aligned_cols=70 Identities=19% Similarity=0.281 Sum_probs=48.0
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHH
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 268 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~ 268 (371)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|... . .++.+.+ ...|+||.|+....
T Consensus 4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~~~-~------~~~~e~~-----~~~d~vi~~vp~~~ 70 (296)
T PRK11559 4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGAET-A------STAKAVA-----EQCDVIITMLPNSP 70 (296)
T ss_pred eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCee-c------CCHHHHH-----hcCCEEEEeCCCHH
Confidence 68899999999887777777888 8889999888877777666521 1 1122222 14788888877544
Q ss_pred HHH
Q 017431 269 VMR 271 (371)
Q Consensus 269 ~~~ 271 (371)
..+
T Consensus 71 ~~~ 73 (296)
T PRK11559 71 HVK 73 (296)
T ss_pred HHH
Confidence 333
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.93 E-value=0.46 Score=41.93 Aligned_cols=77 Identities=18% Similarity=0.148 Sum_probs=45.2
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHHH----HHhcCCcE-E--ecCCCCCchHHHHHHhhcC--CC
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDR----AKNFGVTE-F--VNPKDHDKPIQQVLVDLTD--GG 256 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v-~~~~~~~~~----~~~~g~~~-v--i~~~~~~~~~~~~~~~~~~--gg 256 (371)
++|||+|+ |++|...++.+...|+ +|+.+ .+++++.+. +++.+... . .|..+ ..+..+.+.+... ++
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 80 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGW-SVGINYARDAAAAEETADAVRAAGGRACVVAGDVAN-EADVIAMFDAVQSAFGR 80 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCC-HHHHHHHHHHHHHhcCC
Confidence 57999988 8999998888888899 66554 445444332 22233322 1 22222 1233333333321 37
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|++++++|.
T Consensus 81 id~li~~ag~ 90 (248)
T PRK06947 81 LDALVNNAGI 90 (248)
T ss_pred CCEEEECCcc
Confidence 9999998873
|
|
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=92.91 E-value=1.1 Score=40.93 Aligned_cols=38 Identities=26% Similarity=0.357 Sum_probs=32.7
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHH
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR 226 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~ 226 (371)
.+|.|+|+|.+|...++.+...|. .|+..+.++++.+.
T Consensus 6 ~~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~~~~ 43 (286)
T PRK07819 6 QRVGVVGAGQMGAGIAEVCARAGV-DVLVFETTEELATA 43 (286)
T ss_pred cEEEEEcccHHHHHHHHHHHhCCC-EEEEEECCHHHHHH
Confidence 478999999999887777777799 99999999987665
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.90 E-value=0.57 Score=41.71 Aligned_cols=79 Identities=15% Similarity=0.123 Sum_probs=46.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHH-HHHh---cCCcE-E--ecCCCCCchHHHHHHhhc--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFD-RAKN---FGVTE-F--VNPKDHDKPIQQVLVDLT--D 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~-~~~~~~-~~~~---~g~~~-v--i~~~~~~~~~~~~~~~~~--~ 254 (371)
.++++||+|+ |.+|...+..+...|+ +|+.+.+ +.++.+ ...+ .+... . .|..+ .....+.+.+.. .
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~ 85 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGF-DVAVHYNRSRDEAEALAAEIRALGRRAVALQADLAD-EAEVRALVARASAAL 85 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4678999988 9999999988888999 6666544 333332 2222 23321 1 23332 122222333322 1
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|+++++.|.
T Consensus 86 ~~iD~vi~~ag~ 97 (258)
T PRK09134 86 GPITLLVNNASL 97 (258)
T ss_pred CCCCEEEECCcC
Confidence 379999999873
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=92.87 E-value=0.63 Score=41.02 Aligned_cols=79 Identities=18% Similarity=0.180 Sum_probs=45.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHH-HH---HhcCCcE-Ee--cCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFD-RA---KNFGVTE-FV--NPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~-~~~~~~-~~---~~~g~~~-vi--~~~~~~~~~~~~~~~~~~-- 254 (371)
+++++||+|+ |.+|...+..+...|+ .|+++.+ ++++.+ .. ++.+... .+ |..+ .....+.+.+...
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 82 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGA-KVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSK-VEDANRLVEEAVNHF 82 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 4689999988 9999999988888899 6665533 333322 22 2333322 12 2222 1223333333222
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+.+|++++++|.
T Consensus 83 ~~id~vi~~ag~ 94 (247)
T PRK12935 83 GKVDILVNNAGI 94 (247)
T ss_pred CCCCEEEECCCC
Confidence 268999998875
|
|
| >PRK06436 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.85 E-value=0.69 Score=42.51 Aligned_cols=35 Identities=26% Similarity=0.287 Sum_probs=32.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 220 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~ 220 (371)
-.|++|.|+|.|.+|...+++++.+|+ +|++.+++
T Consensus 120 L~gktvgIiG~G~IG~~vA~~l~afG~-~V~~~~r~ 154 (303)
T PRK06436 120 LYNKSLGILGYGGIGRRVALLAKAFGM-NIYAYTRS 154 (303)
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCC
Confidence 468999999999999999999999999 89999875
|
|
| >PLN02256 arogenate dehydrogenase | Back alignment and domain information |
|---|
Probab=92.84 E-value=1.6 Score=40.08 Aligned_cols=91 Identities=19% Similarity=0.175 Sum_probs=58.2
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
-..+.+|.|+|.|.+|.+.+..++..|. .|+++++++. .+.+.++|+.. .. +..+.+ ....|+|+-|
T Consensus 33 ~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~---~~----~~~e~~----~~~aDvVila 99 (304)
T PLN02256 33 KSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF---FR----DPDDFC----EEHPDVVLLC 99 (304)
T ss_pred cCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee---eC----CHHHHh----hCCCCEEEEe
Confidence 3355789999999999998888888887 8888888764 35566677631 11 121111 1247888888
Q ss_pred cCCHHHHHHHHHH-----hccCCceEEEEcc
Q 017431 264 IGNVSVMRAALEC-----CHKGWGTSVIVGV 289 (371)
Q Consensus 264 ~g~~~~~~~~~~~-----l~~~~G~iv~~g~ 289 (371)
+.... +...++. +.++ ..++.+++
T Consensus 100 vp~~~-~~~vl~~l~~~~l~~~-~iviDv~S 128 (304)
T PLN02256 100 TSILS-TEAVLRSLPLQRLKRS-TLFVDVLS 128 (304)
T ss_pred cCHHH-HHHHHHhhhhhccCCC-CEEEecCC
Confidence 87633 3343333 3454 56666665
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=92.84 E-value=0.43 Score=39.45 Aligned_cols=46 Identities=24% Similarity=0.268 Sum_probs=37.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 232 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~ 232 (371)
.|..||++|+ -++|...++-+...|+ +|+++.+.++.+..+-+.-.
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA-~ViAvaR~~a~L~sLV~e~p 52 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGA-QVIAVARNEANLLSLVKETP 52 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCC-EEEEEecCHHHHHHHHhhCC
Confidence 4678999999 5799999999999999 99999999987765544433
|
|
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=92.84 E-value=0.36 Score=38.12 Aligned_cols=78 Identities=22% Similarity=0.392 Sum_probs=49.0
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEc-CChhhHHHHHh-cCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGID-IDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~-~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
-+|-|+|+|.+|......++..|. .|..+. ++.++.+.+.+ ++...+.+.. +.. ..+|++|-++.
T Consensus 11 l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~~-----------~~~-~~aDlv~iavp 77 (127)
T PF10727_consen 11 LKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDLE-----------EIL-RDADLVFIAVP 77 (127)
T ss_dssp -EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----TT-----------GGG-CC-SEEEE-S-
T ss_pred cEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCcccccccccccccccccccc-----------ccc-ccCCEEEEEec
Confidence 478899999999999999999999 777774 44445555544 4433222221 111 26999999999
Q ss_pred CHHHHHHHHHHhcc
Q 017431 266 NVSVMRAALECCHK 279 (371)
Q Consensus 266 ~~~~~~~~~~~l~~ 279 (371)
+ +.+...++.|..
T Consensus 78 D-daI~~va~~La~ 90 (127)
T PF10727_consen 78 D-DAIAEVAEQLAQ 90 (127)
T ss_dssp C-CHHHHHHHHHHC
T ss_pred h-HHHHHHHHHHHH
Confidence 9 458888888875
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=92.83 E-value=0.37 Score=45.04 Aligned_cols=34 Identities=26% Similarity=0.272 Sum_probs=29.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
++|||+|+ |.+|...++.+...|+ +|+++++..+
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~-~V~~~~r~~~ 35 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGY-EVHGLIRRSS 35 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCC-EEEEEecCCc
Confidence 47999988 9999999999999999 8888877653
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 371 | ||||
| 4dl9_A | 396 | Crystal Structure Of S-nitrosoglutathione Reductase | 0.0 | ||
| 3uko_A | 378 | Crystal Structure Of S-Nitrosoglutathione Reductase | 0.0 | ||
| 3qj5_A | 374 | S-Nitrosoglutathione Reductase (Gsnor) In Complex W | 1e-138 | ||
| 1mc5_A | 374 | Ternary Complex Of Human Glutathione-Dependent Form | 1e-138 | ||
| 1teh_A | 373 | Structure Of Human Liver Chichi Alcohol Dehydrogena | 1e-138 | ||
| 2fzw_A | 373 | Structure Of The Binary Complex Of The E67l Mutant | 1e-137 | ||
| 1cdo_A | 374 | Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Co | 1e-117 | ||
| 3cos_A | 381 | Crystal Structure Of Human Class Ii Alcohol Dehydro | 1e-108 | ||
| 1hdy_A | 374 | Three-Dimensional Structures Of Three Human Alcohol | 1e-107 | ||
| 1hdx_A | 374 | Three-Dimensional Structures Of Three Human Alcohol | 1e-106 | ||
| 1hdz_A | 374 | Three-Dimensional Structures Of Three Human Alcohol | 1e-105 | ||
| 1htb_A | 374 | Crystallization Of Human Beta3 Alcohol Dehydrogenas | 1e-105 | ||
| 1hso_A | 374 | Human Alpha Alcohol Dehydrogenase (Adh1a) Length = | 1e-103 | ||
| 6adh_A | 374 | Structure Of Triclinic Ternary Complex Of Horse Liv | 1e-103 | ||
| 3oq6_A | 374 | Horse Liver Alcohol Dehydrogenase A317c Mutant Comp | 1e-103 | ||
| 1ht0_A | 374 | Human Gamma-2 Alcohol Dehydrogense Length = 374 | 1e-103 | ||
| 1axe_A | 374 | Crystal Structure Of The Active-Site Mutant Phe93-> | 1e-103 | ||
| 1qlh_A | 374 | Horse Liver Alcohol Dehydrogenase Complexed To Nad | 1e-103 | ||
| 1n8k_A | 374 | Horse Liver Alcohol Dehydrogenase Val292thr Mutant | 1e-102 | ||
| 1axg_A | 374 | Crystal Structure Of The Val203->ala Mutant Of Live | 1e-102 | ||
| 1mgo_A | 374 | Horse Liver Alcohol Dehydrogenase Phe93ala Mutant L | 1e-102 | ||
| 1qv6_A | 374 | Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG | 1e-102 | ||
| 1ju9_A | 374 | Horse Liver Alcohol Dehydrogenase Val292ser Mutant | 1e-102 | ||
| 1a71_A | 374 | Ternary Complex Of An Active Site Double Mutant Of | 1e-102 | ||
| 1ee2_B | 373 | The Structure Of Steroid-Active Alcohol Dehydrogena | 1e-102 | ||
| 1ee2_A | 373 | The Structure Of Steroid-Active Alcohol Dehydrogena | 1e-102 | ||
| 1agn_A | 373 | X-Ray Structure Of Human Sigma Alcohol Dehydrogenas | 1e-97 | ||
| 1d1t_A | 373 | Mutant Of Human Sigma Alcohol Dehydrogenase With Le | 3e-97 | ||
| 1e3l_A | 376 | P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase | 7e-96 | ||
| 1p0c_A | 373 | Crystal Structure Of The Nadp(H)-Dependent Vertebra | 2e-95 | ||
| 1e3e_A | 376 | Mouse Class Ii Alcohol Dehydrogenase Complex With N | 9e-95 | ||
| 1f8f_A | 371 | Crystal Structure Of Benzyl Alcohol Dehydrogenase F | 2e-37 | ||
| 1rjw_A | 339 | Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd | 8e-19 | ||
| 1vj0_A | 380 | Crystal Structure Of Alcohol Dehydrogenase (Tm0436) | 1e-18 | ||
| 1llu_A | 342 | The Ternary Complex Of Pseudomonas Aeruginosa Alcoh | 1e-18 | ||
| 3pii_A | 339 | Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog | 1e-18 | ||
| 1h2b_A | 359 | Crystal Structure Of The Alcohol Dehydrogenase From | 2e-18 | ||
| 3s1l_A | 340 | Crystal Structure Of Apo-Form Furx Length = 340 | 1e-17 | ||
| 2hcy_A | 347 | Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi | 2e-17 | ||
| 3meq_A | 365 | Crystal Structure Of Alcohol Dehydrogenase From Bru | 3e-17 | ||
| 2h6e_A | 344 | Crystal Structure Of The D-Arabinose Dehydrogenase | 2e-16 | ||
| 2dq4_A | 343 | Crystal Structure Of Threonine 3-Dehydrogenase Leng | 3e-16 | ||
| 3two_A | 348 | The Crystal Structure Of Cad From Helicobacter Pylo | 7e-16 | ||
| 2nvb_A | 352 | Contribution Of Pro275 To The Thermostability Of Th | 5e-15 | ||
| 3fpl_A | 351 | Chimera Of Alcohol Dehydrogenase By Exchange Of The | 6e-15 | ||
| 1ykf_A | 352 | Nadp-Dependent Alcohol Dehydrogenase From Thermoana | 7e-15 | ||
| 3qe3_A | 355 | Sheep Liver Sorbitol Dehydrogenase Length = 355 | 9e-15 | ||
| 4ej6_A | 370 | Crystal Structure Of A Putative Zinc-Binding Dehydr | 1e-14 | ||
| 2eih_A | 343 | Crystal Structure Of Nad-Dependent Alcohol Dehydrog | 1e-14 | ||
| 1uuf_A | 369 | Crystal Structure Of A Zinc-Type Alcohol Dehydrogen | 7e-14 | ||
| 4ilk_A | 359 | Crystal Structure Of Short Chain Alcohol Dehydrogen | 2e-13 | ||
| 1pl7_A | 356 | Human Sorbitol Dehydrogenase (Apo) Length = 356 | 3e-13 | ||
| 1e3j_A | 352 | Ketose Reductase (Sorbitol Dehydrogenase) From Silv | 3e-13 | ||
| 4eex_A | 348 | Crystal Structure Of Lactococcus Lactis Alcohol Deh | 9e-13 | ||
| 1pl6_A | 356 | Human SdhNADHINHIBITOR COMPLEX Length = 356 | 2e-12 | ||
| 4eez_A | 348 | Crystal Structure Of Lactococcus Lactis Alcohol Deh | 2e-12 | ||
| 2eer_A | 347 | Structural Study Of Project Id St2577 From Sulfolob | 5e-12 | ||
| 1yqd_A | 366 | Sinapyl Alcohol Dehydrogenase Complexed With Nadp+ | 5e-12 | ||
| 4a2c_A | 346 | Crystal Structure Of Galactitol-1-Phosphate Dehydro | 1e-11 | ||
| 2xaa_A | 345 | Alcohol Dehydrogenase Adh-'a' From Rhodococcus Rube | 3e-11 | ||
| 3gfb_A | 350 | L-Threonine Dehydrogenase (Tktdh) From The Hyperthe | 3e-11 | ||
| 2dfv_A | 347 | Hyperthermophilic Threonine Dehydrogenase From Pyro | 2e-10 | ||
| 2d8a_A | 348 | Crystal Structure Of Ph0655 From Pyrococcus Horikos | 2e-10 | ||
| 1jqb_A | 351 | Alcohol Dehydrogenase From Clostridium Beijerinckii | 2e-09 | ||
| 3ftn_A | 352 | Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDRO | 3e-09 | ||
| 3fsr_A | 352 | Chimera Of Alcohol Dehydrogenase By Exchange Of The | 9e-09 | ||
| 1ped_A | 351 | Bacterial Secondary Alcohol Dehydrogenase (Apo-Form | 1e-08 | ||
| 1r37_A | 347 | Alcohol Dehydrogenase From Sulfolobus Solfataricus | 2e-08 | ||
| 2b83_A | 351 | A Single Amino Acid Substitution In The Clostridium | 2e-08 | ||
| 1nto_A | 347 | N249y Mutant Of Alcohol Dehydrogenase From The Arch | 3e-08 | ||
| 3i4c_A | 347 | Crystal Structure Of Sulfolobus Solfataricus Adh(Ss | 7e-08 | ||
| 1kol_A | 398 | Crystal Structure Of Formaldehyde Dehydrogenase Len | 1e-07 | ||
| 2cd9_A | 366 | Sulfolobus Solfataricus Glucose Dehydrogenase 1 - A | 4e-07 | ||
| 1jvb_A | 347 | Alcohol Dehydrogenase From The Archaeon Sulfolobus | 6e-07 | ||
| 2cdb_A | 366 | Sulfolobus Solfataricus Glucose Dehydrogenase 1 In | 2e-06 | ||
| 3fpc_A | 352 | Chimera Of Alcohol Dehydrogenase By Exchange Of The | 2e-06 | ||
| 1qor_A | 327 | Crystal Structure Of Escherichia Coli Quinone Oxido | 2e-05 | ||
| 3m6i_A | 363 | L-Arabinitol 4-Dehydrogenase Length = 363 | 5e-05 | ||
| 3jyl_A | 325 | Crystal Structures Of Pseudomonas Syringae Pv. Toma | 6e-05 | ||
| 1wly_A | 333 | Crystal Structure Of 2-haloacrylate Reductase Lengt | 9e-05 | ||
| 2b5w_A | 357 | Crystal Structure Of D38c Glucose Dehydrogenase Mut | 1e-04 | ||
| 3qwa_A | 334 | Crystal Structure Of Saccharomyces Cerevisiae Zeta- | 2e-04 | ||
| 3uog_A | 363 | Crystal Structure Of Putative Alcohol Dehydrogenase | 6e-04 | ||
| 2dph_A | 398 | Crystal Structure Of Formaldehyde Dismutase Length | 7e-04 |
| >pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ Length = 396 | Back alignment and structure |
|
| >pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From Arabidopsis Thaliana, Complex With Nadh Length = 378 | Back alignment and structure |
|
| >pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374 | Back alignment and structure |
|
| >pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374 | Back alignment and structure |
|
| >pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373 | Back alignment and structure |
|
| >pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With Nad(H) Length = 373 | Back alignment and structure |
|
| >pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed With Nicotinamide Adenine Dinucleotide (Nad), And Zinc Length = 374 | Back alignment and structure |
|
| >pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase (Adh4) In Complex With Nad And Zn Length = 381 | Back alignment and structure |
|
| >pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374 | Back alignment and structure |
|
| >pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374 | Back alignment and structure |
|
| >pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374 | Back alignment and structure |
|
| >pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10 MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+ And 1 Mm 4-Iodopyrazole At 25 C Length = 374 | Back alignment and structure |
|
| >pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a) Length = 374 | Back alignment and structure |
|
| >pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver Alcohol Dehydrogenase At 2.9 Angstroms Resolution Length = 374 | Back alignment and structure |
|
| >pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol Length = 374 | Back alignment and structure |
|
| >pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense Length = 374 | Back alignment and structure |
|
| >pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of Horse Liver Alcohol Dehydrogenase In Complex With Nad And Inhibitor Trifluoroethanol Length = 374 | Back alignment and structure |
|
| >pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double Mutant Of Gly 293 Ala And Pro 295 Thr Length = 374 | Back alignment and structure |
|
| >pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant Complexed To Nad+ And Pyrazole Length = 374 | Back alignment and structure |
|
| >pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver Alcohol Dehydrogenase Complexed With Cofactor Nad And Inhibitor Trifluoroethanol Solved To 2.5 Angstrom Resolution Length = 374 | Back alignment and structure |
|
| >pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant Length = 374 | Back alignment and structure |
|
| >pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol Length = 374 | Back alignment and structure |
|
| >pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant Length = 374 | Back alignment and structure |
|
| >pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With Nad And Trifluoroethanol Length = 374 | Back alignment and structure |
|
| >pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373 | Back alignment and structure |
|
| >pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373 | Back alignment and structure |
|
| >pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase Length = 373 | Back alignment and structure |
|
| >pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine At Position 141 Length = 373 | Back alignment and structure |
|
| >pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376 | Back alignment and structure |
|
| >pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase (Adh8) Length = 373 | Back alignment and structure |
|
| >pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376 | Back alignment and structure |
|
| >pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371 | Back alignment and structure |
|
| >pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339 | Back alignment and structure |
|
| >pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From Thermotoga Maritima At 2.00 A Resolution Length = 380 | Back alignment and structure |
|
| >pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342 | Back alignment and structure |
|
| >pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339 | Back alignment and structure |
|
| >pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a Resolution Length = 359 | Back alignment and structure |
|
| >pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340 | Back alignment and structure |
|
| >pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347 | Back alignment and structure |
|
| >pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365 | Back alignment and structure |
|
| >pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From Sulfolobus Solfataricus Length = 344 | Back alignment and structure |
|
| >pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Length = 343 | Back alignment and structure |
|
| >pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori Complexed With Nadp(H) Length = 348 | Back alignment and structure |
|
| >pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The Alcohol Dehydrogenases (Adhs) Length = 352 | Back alignment and structure |
|
| >pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of C. Beijerinckii Adh By T. Brockii Adh Length = 351 | Back alignment and structure |
|
| >pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium Brockii Length = 352 | Back alignment and structure |
|
| >pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase Length = 355 | Back alignment and structure |
|
| >pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase (Target Psi-012003) From Sinorhizobium Meliloti 1021 Length = 370 | Back alignment and structure |
|
| >pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343 | Back alignment and structure |
|
| >pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol Dehydrogenase-Like Protein Yahk Length = 369 | Back alignment and structure |
|
| >pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase (rspb) From E. Coli Cft073 (efi Target Efi-506413) Complexed With Cofactor Nadh Length = 359 | Back alignment and structure |
|
| >pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo) Length = 356 | Back alignment and structure |
|
| >pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf Whitefly Length = 352 | Back alignment and structure |
|
| >pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Length = 348 | Back alignment and structure |
|
| >pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX Length = 356 | Back alignment and structure |
|
| >pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Variant Re1 Length = 348 | Back alignment and structure |
|
| >pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347 | Back alignment and structure |
|
| >pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+ Length = 366 | Back alignment and structure |
|
| >pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase From Escherichia Coli Length = 346 | Back alignment and structure |
|
| >pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm 44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol Length = 345 | Back alignment and structure |
|
| >pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The Hyperthermophilic Archaeon Thermococcus Kodakaraensis Length = 350 | Back alignment and structure |
|
| >pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus Horikoshii Length = 347 | Back alignment and structure |
|
| >pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3 Length = 348 | Back alignment and structure |
|
| >pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii: Crystal Structure Of Mutant With Enhanced Thermal Stability Length = 351 | Back alignment and structure |
|
| >pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE BY EXCHANGE Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352 | Back alignment and structure |
|
| >pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352 | Back alignment and structure |
|
| >pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form) Length = 351 | Back alignment and structure |
|
| >pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus Complexed With Nad(H) And 2-Ethoxyethanol Length = 347 | Back alignment and structure |
|
| >pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium Beijerinckii Alcohol Dehydrogenase Is Critical For Thermostabilization Length = 351 | Back alignment and structure |
|
| >pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus-Monoclinic Crystal Form Length = 347 | Back alignment and structure |
|
| >pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh) Double Mutant (W95l,N249y) Length = 347 | Back alignment and structure |
|
| >pdb|1KOL|A Chain A, Crystal Structure Of Formaldehyde Dehydrogenase Length = 398 | Back alignment and structure |
|
| >pdb|2CD9|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 - Apo Form Length = 366 | Back alignment and structure |
|
| >pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus Length = 347 | Back alignment and structure |
|
| >pdb|2CDB|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex With Nadp And Glucose Length = 366 | Back alignment and structure |
|
| >pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By E. Histolytica Adh Length = 352 | Back alignment and structure |
|
| >pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone Oxidoreductase Complexed With Nadph Length = 327 | Back alignment and structure |
|
| >pdb|3M6I|A Chain A, L-Arabinitol 4-Dehydrogenase Length = 363 | Back alignment and structure |
|
| >pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325 | Back alignment and structure |
|
| >pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase Length = 333 | Back alignment and structure |
|
| >pdb|2B5W|A Chain A, Crystal Structure Of D38c Glucose Dehydrogenase Mutant From Haloferax Mediterranei Length = 357 | Back alignment and structure |
|
| >pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334 | Back alignment and structure |
|
| >pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363 | Back alignment and structure |
|
| >pdb|2DPH|A Chain A, Crystal Structure Of Formaldehyde Dismutase Length = 398 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 371 | |||
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 0.0 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 0.0 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 0.0 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 0.0 | |
| 1p0f_A | 373 | NADP-dependent alcohol dehydrogenase; ADH topology | 0.0 | |
| 1f8f_A | 371 | Benzyl alcohol dehydrogenase; rossmann fold, oxido | 0.0 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 0.0 | |
| 3jv7_A | 345 | ADH-A; dehydrogenase, nucleotide binding, rossmann | 1e-83 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 3e-72 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 4e-71 | |
| 4a2c_A | 346 | Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc | 1e-68 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 2e-66 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 4e-66 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 2e-65 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 5e-65 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 7e-64 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 2e-61 | |
| 3fpc_A | 352 | NADP-dependent alcohol dehydrogenase; oxydoreducta | 3e-60 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 6e-59 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 1e-57 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 2e-57 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 5e-57 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 2e-56 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 9e-54 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 1e-53 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 7e-45 | |
| 1kol_A | 398 | Formaldehyde dehydrogenase; oxidoreductase; HET: N | 4e-42 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 5e-34 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 1e-32 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 2e-31 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 4e-31 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 8e-30 | |
| 1zsy_A | 357 | Mitochondrial 2-enoyl thioester reductase; medium- | 4e-29 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 1e-28 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 2e-28 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 5e-27 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 4e-25 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 6e-25 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 9e-25 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 4e-23 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 2e-22 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 1e-21 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 4e-21 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 1e-20 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 9e-20 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 2e-19 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 3e-18 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 6e-18 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 3e-17 | |
| 4a27_A | 349 | Synaptic vesicle membrane protein VAT-1 homolog-L; | 1e-16 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 2e-16 | |
| 3goh_A | 315 | Alcohol dehydrogenase, zinc-containing; NP_718042. | 1e-14 | |
| 3iup_A | 379 | Putative NADPH:quinone oxidoreductase; YP_296108.1 | 2e-14 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 3e-13 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 4e-11 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 5e-11 | |
| 4dvj_A | 363 | Putative zinc-dependent alcohol dehydrogenase Pro; | 5e-11 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 3e-10 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 5e-10 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 2e-09 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 5e-06 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 6e-05 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 8e-05 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 1e-04 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 2e-04 | |
| 3fpf_A | 298 | Mtnas, putative uncharacterized protein; thermonic | 5e-04 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 6e-04 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 6e-04 | |
| 1c1d_A | 355 | L-phenylalanine dehydrogenase; amino acid dehydrog | 8e-04 |
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373 | Back alignment and structure |
|---|
Score = 700 bits (1810), Expect = 0.0
Identities = 256/368 (69%), Positives = 298/368 (80%), Gaps = 1/368 (0%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVAWE KPL IE+++VAPP+A EVRIKI+ TA+CHTDAYT SG DPEG FP ILGH
Sbjct: 7 CKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGH 66
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
AGIVESVGEGVT+++ GD VIP Y +C ECKFC + KTNLC K+R G G+M D
Sbjct: 67 LGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMP-DG 125
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
SRF+ GK I H+MGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCG+ TG GA NT
Sbjct: 126 TSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNT 185
Query: 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AK+EPGS+ AVFGLG VGLAV G K AGASR+IG+DI+ KF RAK FG TE +NP+D
Sbjct: 186 AKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDF 245
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
KPIQ+VL+++TDGGVDYSFECIGNV VMRAALE CHKGWG SV+VGVAASG+EI+TRPF
Sbjct: 246 SKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPF 305
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
QLVTGR WKGTAFGG+KS VP LV +YM K+IKVDE+VTHN++ EIN+AF MH G
Sbjct: 306 QLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGK 365
Query: 362 CLRCVLKM 369
+R V+K+
Sbjct: 366 SIRTVVKI 373
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374 | Back alignment and structure |
|---|
Score = 686 bits (1772), Expect = 0.0
Identities = 194/366 (53%), Positives = 250/366 (68%), Gaps = 2/366 (0%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAV WE KP IE+V+VAPP+A EVRIK++ T +C +D + SG P I GH
Sbjct: 9 CKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP-LPVIAGH 67
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
EAAGIVES+GEGVT V+PGD VIP + +C +C+ CK + N C K + G M D
Sbjct: 68 EAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ-DG 126
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
SRF+ GKPI+HF+GTSTFSQYTVV ++SVAKID +PL+KVCL+GCG TG G+
Sbjct: 127 TSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKV 186
Query: 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKV GS AVFGLG VGL+V G KAAGA+R+IG+DI+ KF +AK G TE VNP+D+
Sbjct: 187 AKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDY 246
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
KPIQ+VL ++++GGVD+SFE IG + M AL CC + +G SVIVGV Q +S P
Sbjct: 247 KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPM 306
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
L++GR WKG FGGFKS+ VP LV +M K+ +D +TH + +INE F + G+
Sbjct: 307 LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGE 366
Query: 362 CLRCVL 367
+R +L
Sbjct: 367 SIRTIL 372
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374 | Back alignment and structure |
|---|
Score = 680 bits (1756), Expect = 0.0
Identities = 208/368 (56%), Positives = 265/368 (72%), Gaps = 2/368 (0%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVAWE NKPLVIE+++V P A E+RIKI+ T +CHTD Y + FP +LGH
Sbjct: 9 CKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGH 68
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
E AGIVESVG GVTE QPG+ VIP + ++C EC+FC+S KTN C K +M+ +
Sbjct: 69 EGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPD-VMSPK 127
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
++RF+ G+ + F+GTSTFSQYTVV+ ++VAKIDP APLD VCLLGCGV TG GA NT
Sbjct: 128 ETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNT 187
Query: 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKVEPGS AVFGLG VGLA G +AGA R+I +D++P KF++AK FG T+FVNP DH
Sbjct: 188 AKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDH 247
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
+PI QVL +T+GGVD+S EC+GNV VMR ALE C KGWG SV+VG +++TRP
Sbjct: 248 SEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDL-HDVATRPI 306
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
QL+ GR WKG+ FGGFK + VP +V Y+ K++K+DE++TH M L +N+A M G
Sbjct: 307 QLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGK 366
Query: 362 CLRCVLKM 369
C+R VL +
Sbjct: 367 CIRTVLSL 374
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376 | Back alignment and structure |
|---|
Score = 678 bits (1751), Expect = 0.0
Identities = 180/370 (48%), Positives = 241/370 (65%), Gaps = 6/370 (1%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAA+AW+ PL IE+++V+PP+A EVRI+++ T +C TD K LFP +LGH
Sbjct: 9 CKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKK-ALFPVVLGH 67
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR---GATGAGVMM 118
E AGIVESVG GVT +PGD VIP + +C+ CK C S TNLCGK+R T +M
Sbjct: 68 ECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELM 127
Query: 119 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 178
DR SRF+ G+ IYHFMG S+FSQYTVV + ++A++D +A L++VCL+GCG +G GA
Sbjct: 128 EDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAA 187
Query: 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238
NTAKV PGS AVFGLG VGL+ G K AGASR+I IDI+ +KF +AK G T+ +NP
Sbjct: 188 INTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNP 247
Query: 239 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIST 298
++ DKP+Q V+ +LT GGVDYS +C G ++AA++C GWG+ +VG E++
Sbjct: 248 RELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAK--VDEMTI 305
Query: 299 RPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMH 358
++ GR GT FGG+KS VP LV Y K+ +D VTH + IN+A M
Sbjct: 306 PTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMK 365
Query: 359 GGDCLRCVLK 368
G +R +L
Sbjct: 366 EGKSIRTILT 375
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373 | Back alignment and structure |
|---|
Score = 677 bits (1750), Expect = 0.0
Identities = 188/367 (51%), Positives = 247/367 (67%), Gaps = 4/367 (1%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVAWEP+KPL +E + VAPP+A EVRIKIL + +C +D+ P FP ILGH
Sbjct: 10 CKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSK-FPVILGH 68
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
EA G+VES+G GVT V+PGD VIP + +C C+ CKS +N C K G+M D
Sbjct: 69 EAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMA-DM 127
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
SRF+ GKPIY+ MGTSTF++YTVV D++VAKIDP+APL+ CL+GCG TG GA NT
Sbjct: 128 TSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLES-CLIGCGFATGYGAAVNT 186
Query: 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
AKV PGS AVFGLG VG + G KAAGASR+IG+ KF +A G TE +NPKD+
Sbjct: 187 AKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDY 246
Query: 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 301
DKPI +V+ + T+GGVDY+ EC G + M AL+ + G G +V++G+A+ + + P
Sbjct: 247 DKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPL 306
Query: 302 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
L+TGR KG+ FGGFK +V LVD YMKK+I V+ V+ +TL +IN+AF + G
Sbjct: 307 LLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQ 365
Query: 362 CLRCVLK 368
+R ++
Sbjct: 366 GVRSIMI 372
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371 | Back alignment and structure |
|---|
Score = 592 bits (1529), Expect = 0.0
Identities = 108/371 (29%), Positives = 174/371 (46%), Gaps = 10/371 (2%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
AAV ++ +++ PQ EV +K++ T +CHTD K P P +LGH
Sbjct: 7 IIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVP-LPAVLGH 65
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
E +GI+E++G VTE+Q GDHV+ Y C +C C +G C + G +G +
Sbjct: 66 EGSGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADS-EG 123
Query: 122 KSRFSINGKPIY--HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVW 179
+ + + HF S+F+ Y + + + K+ P++ + LGCG+ TG GA
Sbjct: 124 NHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACI 183
Query: 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 239
N KV P S +G G VGL+ AK GAS +I +DI + + AK G T +N K
Sbjct: 184 NALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSK 243
Query: 240 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTR 299
D + ++TDGGV+++ E G+ +++ ++ G +VG G
Sbjct: 244 TQD--PVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTAQFD 300
Query: 300 PFQL-VTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMH 358
L + G+ G G + +P LV Y + + D+ V EIN+A
Sbjct: 301 VNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSR 359
Query: 359 GGDCLRCVLKM 369
G L+ ++K+
Sbjct: 360 KGITLKPIIKI 370
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380 | Back alignment and structure |
|---|
Score = 531 bits (1370), Expect = 0.0
Identities = 93/379 (24%), Positives = 157/379 (41%), Gaps = 27/379 (7%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
A V + N+PLV ++ +++ G + ++IL +C +D + + G+DP P ILGH
Sbjct: 18 AHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGH 77
Query: 62 EAAGIVESVGEGVT-----EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGV 116
E AG V V ++PGD ++ C EC +CK K R
Sbjct: 78 EGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNR----KVY 133
Query: 117 MMNDRKSRFSINGKPIYHFMGTSTFSQYTVVH-DVSVAKIDPQAPLDKVCLLGCGVPTGL 175
+N S + H G +S + V+ + V K+ + LD + + C T
Sbjct: 134 GINRGCSEYP-------HLRGC--YSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGATAY 184
Query: 176 GAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 235
A + G V + G G +GL A++ GA VI I P + A+ G
Sbjct: 185 HAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLT 244
Query: 236 VNPKDHD-KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 293
+N ++ + ++ ++D+T G G D+ E G+ + E +G G + GVA
Sbjct: 245 LNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAVPQ 303
Query: 294 QEISTRPFQLVTGRVWKGTAFGG--FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEIN 351
+ PF++ V K F G S V + + + +TH + L E N
Sbjct: 304 DPV---PFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSRNYQLLSKLITHRLPLKEAN 360
Query: 352 EAFRYMHGGDCLRCVLKMQ 370
+A M + L+ +L +
Sbjct: 361 KALELMESREALKVILYPE 379
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345 | Back alignment and structure |
|---|
Score = 257 bits (658), Expect = 1e-83
Identities = 83/370 (22%), Positives = 128/370 (34%), Gaps = 33/370 (8%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE--GLFPCILG 60
KA E V+ D+ P GE+ +K+ LCH+D + + P LG
Sbjct: 2 KAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLG 61
Query: 61 HEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 120
HE G V +GEGVT GD V C C C G+ N C +
Sbjct: 62 HEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITP----- 116
Query: 121 RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKV-CLLGCGVPTGLGAVW 179
G + ++Y +V L G+
Sbjct: 117 --PGLGSPG----------SMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISR 164
Query: 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 239
+ PGS V G+G +G + +A A+RVI +D+D + A+ G V
Sbjct: 165 VLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSG 224
Query: 240 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIST 298
+ +LT G G F+ +G S + A + G +VG+ A
Sbjct: 225 --AGAADAIR-ELTGGQGATAVFDFVGAQSTIDTAQQVVAVD-GHISVVGIHAGAHAKVG 280
Query: 299 RPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMH 358
F + G +G +RS++ +V + + T TL E A+R +
Sbjct: 281 -FFMIPFGASVVTPYWG---TRSELMEVVALARAGRLDI---HTETFTLDEGPAAYRRLR 333
Query: 359 GGDCL-RCVL 367
G R V+
Sbjct: 334 EGSIRGRGVV 343
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370 | Back alignment and structure |
|---|
Score = 228 bits (584), Expect = 3e-72
Identities = 85/374 (22%), Positives = 145/374 (38%), Gaps = 45/374 (12%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 62
KA + + +V + P ++ +K+ +C TD + G+ P P LGHE
Sbjct: 25 KAVRLESVGN-ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFPST-PPVTLGHE 82
Query: 63 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRK 122
GIV G V ++ PG + C C C++G+ NLC +R
Sbjct: 83 FCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLR------------- 129
Query: 123 SRFSINGKPIYHFMGTST---FSQYTVVHDVSVAKIDPQAPLDKVCL---LGCGVPTGLG 176
+G F++Y +V +I L C +
Sbjct: 130 ------------AIGIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCL----H 173
Query: 177 AVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 236
V + + ++ GS VA+ G G +GL + A+ AGA+ VI K A+ G T V
Sbjct: 174 GV-DLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATV 232
Query: 237 NPKDHDKPIQQV--LVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQ 294
+P D ++ + V L GGVD EC G ++ + G GT VI+GV G+
Sbjct: 233 DPSAGD-VVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAG-GTVVILGVLPQGE 290
Query: 295 EISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAF 354
++ PF ++ + G F + D I++D ++ ++L E +
Sbjct: 291 KVEIEPFDILFREL---RVLGSFINPFVHRRAADLVATGAIEIDRMISRRISLDEAPDVI 347
Query: 355 RYMHGGDCLRCVLK 368
++ ++
Sbjct: 348 SNPAAAGEVKVLVI 361
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359 | Back alignment and structure |
|---|
Score = 225 bits (576), Expect = 4e-71
Identities = 95/376 (25%), Positives = 160/376 (42%), Gaps = 46/376 (12%)
Query: 3 KAAVAWEPNKPLVIEDVQV-APPQAGEVRIKILFTALCHTDAYTWSGKDPEGL---FPCI 58
KAA E NKPL IEDV +V ++I +CHTD + G E L P
Sbjct: 17 KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYT 76
Query: 59 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 118
LGHE G +E V EGV ++ GD VI C C++G+ C +
Sbjct: 77 LGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEF-------- 128
Query: 119 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDK---VCLLGCGVPTGL 175
+I+G F+++ SV K+ +K + L T
Sbjct: 129 ----PGLNIDG----------GFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAY 174
Query: 176 GAVWNT-AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 234
AV + PG+ VA+ G+G +G + K + VI +D+ +K A+ G
Sbjct: 175 RAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADH 234
Query: 235 FVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 293
V+ + P++QV+ +LT G GV+ + + +G+ + + + G +IVG G
Sbjct: 235 VVDAR--RDPVKQVM-ELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GRLIIVGY---G 287
Query: 294 QEISTRPFQLV-TGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINE 352
E+ +++ + ++G+ G + ++ LV ++ +++V L EIN+
Sbjct: 288 GELRFPTIRVISSEVSFEGSLVG---NYVELHELVTLALQGKVRV---EVDIHKLDEIND 341
Query: 353 AFRYMHGGDCL-RCVL 367
+ G+ L R VL
Sbjct: 342 VLERLEKGEVLGRAVL 357
|
| >4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346 | Back alignment and structure |
|---|
Score = 219 bits (559), Expect = 1e-68
Identities = 78/381 (20%), Positives = 136/381 (35%), Gaps = 54/381 (14%)
Query: 3 KAAVAWEPNKPLVIEDVQV-APPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
K+ V + + + + EVR+KI + LC +D + +P LGH
Sbjct: 2 KSVVNDTDGI-VRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFK-NGAHYYPITLGH 59
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
E +G +++VG GV ++ PGD V C C C G + C K
Sbjct: 60 EFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYD------------ 107
Query: 122 KSRFSINGKPIYHFMGTS---TFSQYTVVHDVSVAKIDPQAPLDKVCL---LGCGVPTGL 175
F+G+ F++Y VV +V + P++ + G+
Sbjct: 108 -------------FIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGL---- 150
Query: 176 GAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 235
A A+ V + G GT+GL + A A GA V IDI +K AK+FG +
Sbjct: 151 HAFHL-AQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQT 209
Query: 236 VNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQ 294
N + Q+ L + E G + A+E +VG
Sbjct: 210 FNSSEMS--APQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPH-AQLALVGTLHQDL 266
Query: 295 EISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMK-------KEIKVDEYVTHNMTL 347
+++ F + + K G PW ++ +++ ++ + H +
Sbjct: 267 HLTSATFGKI---LRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSF 323
Query: 348 GEINEAFRYM-HGGDCLRCVL 367
+A R + + +L
Sbjct: 324 ESFAQAVRDIARNAMPGKVLL 344
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343 | Back alignment and structure |
|---|
Score = 212 bits (543), Expect = 2e-66
Identities = 91/384 (23%), Positives = 148/384 (38%), Gaps = 59/384 (15%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLF----PCI 58
+A P + L + D V P GE+ +++ ++C TD + W D P +
Sbjct: 2 RALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKW-DAWARGRIRPPLV 60
Query: 59 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 118
GHE +G+VE+VG GV Q GDHV C C C++G ++C +
Sbjct: 61 TGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQ--------- 111
Query: 119 NDRKSRFSINGKPIYHFMGTS---TFSQYTVVHDVSVAKIDPQAPLDKVCL---LGCGVP 172
+G F++Y VV + P + + G V
Sbjct: 112 ----------------ILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAVH 155
Query: 173 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 232
T G V + G G +GL A +A+GA ++ D +P + A+ +
Sbjct: 156 TVY-----AGSGVSGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYA- 209
Query: 233 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 292
VNP + D + +V+ +T GV+ E GN + + L G G + I+G+ +
Sbjct: 210 DRLVNPLEED--LLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPG-GEARILGIPSD 266
Query: 293 GQEISTRPFQLVTGRVWKG-TAFGGFKSRSQVPW-----LVDKYMKKEIKVDEYVTHNMT 346
L V +G TAFG R W LV + + +TH +
Sbjct: 267 PIRFD-----LAGELVMRGITAFGIAGRRLWQTWMQGTALVY---SGRVDLSPLLTHRLP 318
Query: 347 LGEINEAFRYMHGGDCLRCVLKMQ 370
L EAF + G ++ +L +
Sbjct: 319 LSRYREAFGLLASGQAVKVILDPK 342
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348 | Back alignment and structure |
|---|
Score = 212 bits (541), Expect = 4e-66
Identities = 95/383 (24%), Positives = 153/383 (39%), Gaps = 55/383 (14%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLF----PCI 58
A + +P + +V V P GEV IK+L T++C TD + + + P I
Sbjct: 6 VAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEW-NEWAQSRIKPPQI 64
Query: 59 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 118
+GHE AG V +G GV ++ GD+V C +C C+ G+ ++C +
Sbjct: 65 MGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTK--------- 115
Query: 119 NDRKSRFSINGKPIYHFMGTST---FSQYTVVHDVSVAKIDPQAPLDKVCL---LGCGVP 172
G T F++Y VV ++ K P + L LG V
Sbjct: 116 ----------------IFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAVD 159
Query: 173 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 232
T L G V + G G +GL AKA+GA VI + + + AK G
Sbjct: 160 TVLAGP------ISGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGA 213
Query: 233 TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 291
+NP + D + + ++D+TDG GVD E G + L+ G ++G+
Sbjct: 214 DYVINPFEED--VVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPA-GRVSLLGLYP 270
Query: 292 SGQEISTRPFQLVTGRVWKG-TAFGGFKSRSQVPW-LVDKYM-KKEIKVDEYVTHNM-TL 347
I L+ ++K T +G W V + + ++ +D +TH
Sbjct: 271 GKVTID--FNNLI---IFKALTIYGITGRHLWETWYTVSRLLQSGKLNLDPIITHKYKGF 325
Query: 348 GEINEAFRYMHGGDCLRCVLKMQ 370
+ EAF M G + V ++
Sbjct: 326 DKYEEAFELMRAGKTGKVVFMLK 348
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347 | Back alignment and structure |
|---|
Score = 210 bits (537), Expect = 2e-65
Identities = 87/376 (23%), Positives = 150/376 (39%), Gaps = 43/376 (11%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSG--------KDPEGL 54
+A E KPL ++++ V P+ +V IK+ +CH+D + G +D
Sbjct: 2 RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVK 61
Query: 55 FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGA 114
P LGHE AG +E VG+ V GD V C +C+ G+ +LC R G
Sbjct: 62 LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPR-WLG- 119
Query: 115 GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTG 174
+ +G +++Y +V + + L C T
Sbjct: 120 ----------INFDG----------AYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITT 159
Query: 175 LGAVWNTAKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 233
AV A ++P + V G G +G + AKA + +IG+D+ + + AK G
Sbjct: 160 YRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGAD 218
Query: 234 EFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 292
+N D P+ ++ +T+ GVD + + + + K G V+VG+ +
Sbjct: 219 YVINASMQD-PLAEIR-RITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLFGA 275
Query: 293 GQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINE 352
P ++ + G+ G ++S ++ + + KV +T M L E NE
Sbjct: 276 DLHYHA-PLITLSEIQFVGSLVG---NQSDFLGIMR--LAEAGKVKPMITKTMKLEEANE 329
Query: 353 AFRYMHGGDCL-RCVL 367
A + + R VL
Sbjct: 330 AIDNLENFKAIGRQVL 345
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344 | Back alignment and structure |
|---|
Score = 209 bits (534), Expect = 5e-65
Identities = 93/374 (24%), Positives = 149/374 (39%), Gaps = 45/374 (12%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE--GLFPCILG 60
KAA+ + ++PL IEDV + PQ EV I+I +C TD W G + + P ILG
Sbjct: 5 KAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILG 64
Query: 61 HEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 120
HE AG + VGE + +V+ GD+V+ C++C+ GK N+C G
Sbjct: 65 HENAGTIVEVGE-LAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQI-IPG------- 115
Query: 121 RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV-- 178
+ NG FS+Y +V + L T +GA+
Sbjct: 116 ----QTTNG----------GFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGTTSMGAIRQ 161
Query: 179 -WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRAKNFGVTEFV 236
+V V G+G + + + KA + ++GI K D A G
Sbjct: 162 ALPFISKFAEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVS 221
Query: 237 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE 295
KD + I LTDG G + + +G + + G ++VG+ G+
Sbjct: 222 EMKDAESLIN----KLTDGLGASIAIDLVGTEETTYNLGKLLAQE-GAIILVGME--GKR 274
Query: 296 ISTRPFQLV-TGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAF 354
+S F + G+ +G S + + +V +IK + L +IN+AF
Sbjct: 275 VSLEAFDTAVWNKKLLGSNYG---SLNDLEDVVRLSESGKIKP---YIIKVPLDDINKAF 328
Query: 355 RYMHGGDCL-RCVL 367
+ G R V+
Sbjct: 329 TNLDEGRVDGRQVI 342
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356 | Back alignment and structure |
|---|
Score = 206 bits (527), Expect = 7e-64
Identities = 88/387 (22%), Positives = 141/387 (36%), Gaps = 64/387 (16%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLF----PCI 58
+ V L +E+ + P EV +++ +C +D + W G F P +
Sbjct: 9 LSLV-VHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEY-GRIGNFIVKKPMV 66
Query: 59 LGHEAAGIVESVGEGVTEVQPGDHV-----IPCYQAECRECKFCKSGKTNLCGKVRGATG 113
LGHEA+G VE VG V ++PGD V P +FCK G+ NL +
Sbjct: 67 LGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPR-----ENDEFCKMGRYNLSPSIF---- 117
Query: 114 AGVMMNDRKSRFSINGKPIYHFMGTS----TFSQYTVVHDVSVAKIDPQAPLDKVCL--- 166
F T ++ + K+ ++ L
Sbjct: 118 ---------------------FCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEP 156
Query: 167 LGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR 226
L G+ A V G V V G G +G+ AKA GA++V+ D+ + +
Sbjct: 157 LSVGI----HAC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSK 211
Query: 227 AKNFGVTEFVNPKDHD-KPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSV 285
AK G + + I + + + + EC G + ++A + G GT V
Sbjct: 212 AKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLV 270
Query: 286 IVGVAASGQEISTRPFQLVTGR--VWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTH 343
+VG+ + + P R KG F+ + P + K + V VTH
Sbjct: 271 LVGLGSEMTTV---PLLHAAIREVDIKGV----FRYCNTWPVAISMLASKSVNVKPLVTH 323
Query: 344 NMTLGEINEAFRYMHGGDCLRCVLKMQ 370
L + EAF G L+ +LK
Sbjct: 324 RFPLEKALEAFETFKKGLGLKIMLKCD 350
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404 | Back alignment and structure |
|---|
Score = 201 bits (514), Expect = 2e-61
Identities = 68/393 (17%), Positives = 127/393 (32%), Gaps = 59/393 (15%)
Query: 3 KAAVAWEPNKPLVIEDVQV-APPQAGEVRIKILFTALCHTDAYTWSGKDPEGLF------ 55
+ W + + +E+V + E+ IK+ +C +D + + +
Sbjct: 32 LGSKVWRYPE-VRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTG 90
Query: 56 -PCILGHEAAGIVESVGEGVTE------VQPGDHVIPCYQAECRECKFCKSGKTNLCGKV 108
P LGHE +G+V G + G+ V C C+ C G N C +
Sbjct: 91 FPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENL 150
Query: 109 RGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI-------DPQAPL 161
G +++G F++Y V + +
Sbjct: 151 NEL---GF---------NVDG----------AFAEYVKVDAKYAWSLRELEGVYEGDRLF 188
Query: 162 DKVCL---LGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID 218
L + + PG V + G G +GLA K AGAS+VI +
Sbjct: 189 LAGSLVEPTSVAYN---AVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSE 245
Query: 219 IDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECC 277
+ + AK G ++P + + ++D T+G G E G ++ +E
Sbjct: 246 PSEVRRNLAKELGADHVIDPTKEN--FVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEV 303
Query: 278 H--KGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPW-LVDKYMKKE 334
+ + VA + +I R G + V M
Sbjct: 304 IWRARGINATVAIVARADAKIPLTGEVFQVRRA---QIVGSQGHSGHGTFPRVISLMASG 360
Query: 335 IKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVL 367
+ + + ++ +++ EI E + + L V
Sbjct: 361 MDMTKIISKTVSMEEIPEYIKRLQTDKSLVKVT 393
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352 | Back alignment and structure |
|---|
Score = 197 bits (502), Expect = 3e-60
Identities = 90/378 (23%), Positives = 140/378 (37%), Gaps = 39/378 (10%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 62
K K + + + P + ++ L A C +D +T ILGHE
Sbjct: 2 KGFAMLSIGK-VGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHE 60
Query: 63 AAGIVESVGEGVTEVQPGDHVI-PCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
A G V VG V + +PGD V+ P + G G G N
Sbjct: 61 AVGEVVEVGSEVKDFKPGDRVVVPAITP-DWRTSEVQRGYHQHSG---GMLAGWKFSN-- 114
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVH--DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVW 179
+G F ++ V+ D+++A + + PL+ ++ + TG
Sbjct: 115 ----VKDG----------VFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAE 160
Query: 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 239
A ++ G V V G+G VGL GA GA R+ + D A +G T+ +N K
Sbjct: 161 L-ANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYK 219
Query: 240 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIST 298
+ D ++Q+L TDG GVD G+V A++ G V G I
Sbjct: 220 NGD-IVEQIL-KATDGKGVDKVVIAGGDVHTFAQAVKMIKPG-SDIGNVNYLGEGDNI-- 274
Query: 299 RPFQLVTGRVWKG--TAFGGFKS--RSQVPWLVDKYMKKEIKVDEYVTHNMT-LGEINEA 353
V G GG R ++ L+D K + + VTH I +A
Sbjct: 275 -DIPRSEWGVGMGHKHIHGGLCPGGRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKA 333
Query: 354 FRYM--HGGDCLRCVLKM 369
F M D ++ V+ +
Sbjct: 334 FMLMKDKPKDLIKPVVIL 351
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363 | Back alignment and structure |
|---|
Score = 193 bits (494), Expect = 6e-59
Identities = 80/379 (21%), Positives = 129/379 (34%), Gaps = 61/379 (16%)
Query: 3 KAAVAWEPNKPLVIEDVQVAP-PQAGEVRIKILFTALCHTD--AYTWSGKDPEGLF---- 55
W +E VQ + GEV + + T +C +D + G
Sbjct: 16 PQHDLWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKH---GCIGPMIVEC 72
Query: 56 PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAG 115
+LGHE+AG V +V V ++ GD V Q C C+ C +G+ N C +V
Sbjct: 73 DHVLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVD------ 126
Query: 116 VMMNDRKSRFSINGKPIYHFMGTS----TFSQYTVVHDVSVAKIDPQAPLDKVCL---LG 168
F+ T +Y V KI + + L
Sbjct: 127 -------------------FLSTPPVPGLLRRYVNHPAVWCHKI-GNMSYENGAMLEPLS 166
Query: 169 CGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 228
+ + A V G V + G G +GL AKAAGA ++ DID + AK
Sbjct: 167 VAL----AGL-QRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAK 221
Query: 229 NFGVTEFVNPKDHDKP--IQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSV 285
+ + + +V+ G + EC G S + AA+ G G
Sbjct: 222 EICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFG-GKVF 280
Query: 286 IVGVAASGQEISTRPFQLVTGR--VWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTH 343
++GV + +I PF + R + ++ + P + + + VTH
Sbjct: 281 VIGVGKNEIQI---PFMRASVREVDLQFQ----YRYCNTWPRAIRLVENGLVDLTRLVTH 333
Query: 344 NMTLGEINEAFRYMHGGDC 362
L + +AF
Sbjct: 334 RFPLEDALKAFETASDPKT 352
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339 | Back alignment and structure |
|---|
Score = 190 bits (484), Expect = 1e-57
Identities = 108/387 (27%), Positives = 160/387 (41%), Gaps = 68/387 (17%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGH 61
KAAV + +PL I++V+ GEV ++I +CHTD + G P P I GH
Sbjct: 2 KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGH 61
Query: 62 EAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 120
E GIVE VG GVT ++ GD V IP + C C +C SG+ LC + A
Sbjct: 62 EGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAG-------- 113
Query: 121 RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGC-GVPTGLGAVW 179
+S++G +++Y V KI ++ + C GV +
Sbjct: 114 ----YSVDG----------GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGV-----TTY 154
Query: 180 N---TAKVEPGSIVAVFGLGTVG-LAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 235
+PG VA++G+G +G +AV + AKA G V+ +DI +K + AK G
Sbjct: 155 KALKVTGAKPGEWVAIYGIGGLGHVAV-QYAKAMGL-NVVAVDIGDEKLELAKELGADLV 212
Query: 236 VNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE 295
VNP D + GGV + + ++A +G G V+VG+
Sbjct: 213 VNPLKEDAAKF---MKEKVGGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPEEMP 268
Query: 296 ISTRPFQLVTGRV-WKGTAFGG---------FKSRSQVPWLVDKYMKKEIKVDEYVTHNM 345
I F V + G+ G F + +V K I+V
Sbjct: 269 IP--IFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKV--------KTIIEV-------Q 311
Query: 346 TLGEINEAFRYMHGGDCL-RCVLKMQD 371
L +INE F M G R VL ++D
Sbjct: 312 PLEKINEVFDRMLKGQINGRVVLTLED 338
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352 | Back alignment and structure |
|---|
Score = 190 bits (484), Expect = 2e-57
Identities = 94/375 (25%), Positives = 150/375 (40%), Gaps = 65/375 (17%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWS-GK--DPEGLFPCIL 59
+AV L +E + P+ EV +++ + +C +D + + G+ D P ++
Sbjct: 6 LSAV-LYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVI 64
Query: 60 GHEAAGIVESVGEGVTEVQPGDHV-----IPCYQAECRECKFCKSGKTNLCGKVRGATGA 114
GHEA+G V VG+ V ++ GD V +P CR C+FCK GK NLC +
Sbjct: 65 GHEASGTVVKVGKNVKHLKKGDRVAVEPGVP-----CRRCQFCKEGKYNLCPDLT----- 114
Query: 115 GVMMNDRKSRFSINGKPIYHFMGTS----TFSQYTVVHDVSVAKIDPQAPLDKVCL---L 167
F T ++Y V K+ L++ L L
Sbjct: 115 --------------------FCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALLEPL 154
Query: 168 GCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 227
GV A A V+ G+ V V G G +GL AKA GA V+ P++ + A
Sbjct: 155 SVGV----HAC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAF-VVCTARSPRRLEVA 208
Query: 228 KNFG--VTEFVNPKDHD-KPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTS 284
KN G VT V+P + I + + + + +C GN + + G GT
Sbjct: 209 KNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTL 267
Query: 285 VIVGVAASGQEISTRPFQLVTGR--VWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVT 342
++VG+ G ++ T P R K F+ + P ++ V + VT
Sbjct: 268 MLVGM---GSQMVTVPLVNACAREIDIKSV----FRYCNDYPIALEMVASGRCNVKQLVT 320
Query: 343 HNMTLGEINEAFRYM 357
H+ L + +AF
Sbjct: 321 HSFKLEQTVDAFEAA 335
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340 | Back alignment and structure |
|---|
Score = 188 bits (479), Expect = 5e-57
Identities = 99/376 (26%), Positives = 154/376 (40%), Gaps = 50/376 (13%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGH 61
KAAV PL I++V V P G+V++KI + +CHTD + G P P I GH
Sbjct: 4 KAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGH 63
Query: 62 EAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 120
E G V +VG GV+ V+ GD V +P + C C+ C G LC K +
Sbjct: 64 EGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTG-------- 115
Query: 121 RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGC-GVPTGLGAVW 179
+S+NG + +Y V V + + ++ + C GV V+
Sbjct: 116 ----YSVNG----------GYGEYVVADPNYVGLLPDKVGFVEIAPILCAGV-----TVY 156
Query: 180 N---TAKVEPGSIVAVFGLGTVG-LAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 235
PG V + G+G +G +AV + A+A G RV +DID K + A+ G
Sbjct: 157 KGLKVTDTRPGQWVVISGIGGLGHVAV-QYARAMGL-RVAAVDIDDAKLNLARRLGAEVA 214
Query: 236 VNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE 295
VN +D D P + ++ GG + A+ +G GT + G+
Sbjct: 215 VNARDTD-PAAWLQKEI--GGAHGVLVTAVSPKAFSQAIGMVRRG-GTIALNGLPPGDFG 270
Query: 296 ISTRPFQLVTGRV-WKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAF 354
F +V + +G+ G RS + +D ++K L ++N+ F
Sbjct: 271 TP--IFDVVLKGITIRGSIVGT---RSDLQESLDFAAHGDVKAT---VSTAKLDDVNDVF 322
Query: 355 RYMHGGDCL-RCVLKM 369
+ G R VL
Sbjct: 323 GRLREGKVEGRVVLDF 338
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347 | Back alignment and structure |
|---|
Score = 186 bits (476), Expect = 2e-56
Identities = 98/388 (25%), Positives = 155/388 (39%), Gaps = 66/388 (17%)
Query: 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL-FPCIL 59
K + +E + L +D+ V P+A E+ I + ++ +CHTD + W G P + P +
Sbjct: 5 TQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVG 64
Query: 60 GHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 118
GHE AG+V +GE V + GD+ I C C++C+ G + C +
Sbjct: 65 GHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSG------ 118
Query: 119 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGC-GVPT--GL 175
++ +G +F QY V A I L +V + C G+ L
Sbjct: 119 ------YTHDG----------SFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKAL 162
Query: 176 GAVWNTAKVEPGSIVAVFGLGTVGL---AVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 232
+A + G VA+ G GL AV + AKA G RV+GID K + ++ G
Sbjct: 163 ----KSANLMAGHWVAISGAAG-GLGSLAV-QYAKAMGY-RVLGIDGGEGKEELFRSIGG 215
Query: 233 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 292
F++ + VL TDGG + + + A+ GT+V+VG+ A
Sbjct: 216 EVFIDFTKEKDIVGAVL-KATDGGAHGVINVSVSEAAIEASTRYVRAN-GTTVLVGMPA- 272
Query: 293 GQEISTRPFQLVTGRV-WKGTAFGG---------FKSRSQVPWLVDKYMKKEIKVDEYVT 342
G + + F V + G+ G F +R V K IKV
Sbjct: 273 GAKCCSDVFNQVVKSISIVGSYVGNRADTREALDFFARGLV--------KSPIKVVG--- 321
Query: 343 HNMTLGEINEAFRYMHGGDCL-RCVLKM 369
L + E + M G + R V+
Sbjct: 322 ----LSTLPEIYEKMEKGQIVGRYVVDT 345
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366 | Back alignment and structure |
|---|
Score = 180 bits (459), Expect = 9e-54
Identities = 61/385 (15%), Positives = 121/385 (31%), Gaps = 49/385 (12%)
Query: 3 KAAVAWEPNKPLVIEDVQV-APPQAGEVRIKILFTALCHTDAYTWSGKD-----PEGLFP 56
KA + PN + ++DV G+++I+ ++ +C D +GK P+G
Sbjct: 2 KAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDF 61
Query: 57 CILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGV 116
+LGHEA G+VE G GD V+P + C C+ C G+ + C AG+
Sbjct: 62 LVLGHEAIGVVEESYHGF---SQGDLVMPVNRRGCGICRNCLVGRPDFCETGEF-GEAGI 117
Query: 117 MMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCL--LGCGVPT- 173
D G ++ + KI + L +
Sbjct: 118 HKMD----------------GF--MREWWYDDPKYLVKIPKSIEDIGILAQPLADIEKSI 159
Query: 174 --------GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD 225
+ V V G G +G+ + G + +P + +
Sbjct: 160 EEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVE 219
Query: 226 RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG-NVSVMRAALECCHKGWGTS 284
+ N + ++ + G D + G +V+++ + + G
Sbjct: 220 QTVIEETK--TNYYNSSNGYDKLKDSV--GKFDVIIDATGADVNILGNVIPLLGRN-GVL 274
Query: 285 VIVGVAASGQ-EISTRPFQLVTGR--VWKGT-AFGGFKSRSQVPWLVDKYMKKEIKVDEY 340
+ G + SG + + Q + G + V L
Sbjct: 275 GLFGFSTSGSVPLDYKTLQEIVHTNKTIIGLVNGQKPHFQQAVVHLASWKTLYPKAAKML 334
Query: 341 VTHNMTLGEINEAFRYMHGGDCLRC 365
+T +++ + E + + +
Sbjct: 335 ITKTVSINDEKELLKVLREKEHGEI 359
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357 | Back alignment and structure |
|---|
Score = 180 bits (458), Expect = 1e-53
Identities = 61/371 (16%), Positives = 116/371 (31%), Gaps = 50/371 (13%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK---DPEGLFPCIL 59
KA V+ + P++GE ++ L +C TD +G PEG +L
Sbjct: 2 KAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVL 61
Query: 60 GHEAAGIVESVGEGVTEVQPGDHV--IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 117
GHEA G+V V TE++ GD V ++ + + ++ V
Sbjct: 62 GHEAVGVV--VDPNDTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVG 119
Query: 118 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCL---LGCGV-PT 173
+G S++ + + +I P++ + L +
Sbjct: 120 A---------HG----------YMSEFFTSPEKYLVRI-PRSQAELGFLIEPISITEKAL 159
Query: 174 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKA--AGASRVIGI---DIDPKKFDRAK 228
+A S V G G++GL K G + + D D +
Sbjct: 160 EHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE 219
Query: 229 NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVG 288
T + + + + V +D+ +E G +++ G ++G
Sbjct: 220 ELDATYVDSRQTPVEDVPDVY-----EQMDFIYEATGFPKHAIQSVQALAPN-GVGALLG 273
Query: 289 VAASGQ---EISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYM--KKEIKVDEYVTH 343
V + + ++V G S + + +++ VT
Sbjct: 274 VPSDWAFEVDAGAFHREMVLHNK---ALVGSVNSHVEHFEAATVTFTKLPKWFLEDLVTG 330
Query: 344 NMTLGEINEAF 354
L E AF
Sbjct: 331 VHPLSEFEAAF 341
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398 | Back alignment and structure |
|---|
Score = 158 bits (401), Expect = 7e-45
Identities = 76/406 (18%), Positives = 145/406 (35%), Gaps = 62/406 (15%)
Query: 5 AVAWEPNKPLVIEDVQ----VAP--PQAGEVRIKILFTALCHTDAYTWSGKDP--EGLFP 56
+V + + L +E V V +K++ T +C +D + + G+ +G
Sbjct: 5 SVVYHGTRDLRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFIVPKGH-- 62
Query: 57 CILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLC--GKVRGATGA 114
+LGHE G V G V + GD V + C C+ CK ++++C V
Sbjct: 63 -VLGHEITGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADL 121
Query: 115 GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVH--DVSVAKI----DPQAPLDKVCLLG 168
G G + + G ++Y +V D + K + + L+
Sbjct: 122 G-----------AFGFDLKGWSGGQ--AEYVLVPYADYMLLKFGDKEQAMEKIKDLTLIS 168
Query: 169 CGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 228
+PTG + A V+PGS V + G G VG A GA+ GA+ VI D +P++
Sbjct: 169 DILPTGFHGCVS-AGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLS 227
Query: 229 NFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG--------------NVSVMRAA 273
+ G ++ ++ Q+ + VD + +G + +
Sbjct: 228 DAGFET-IDLRNSAPLRDQID-QILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSL 285
Query: 274 LECCHKGWGTSVIVGV------AASGQEISTRPFQLVTGRVW-KGTAFGGFKS--RSQVP 324
+ G G I G+ ++ + L G++W K + +
Sbjct: 286 FDVVRAG-GAIGIPGIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAPVTNYNR 344
Query: 325 WLVDKYMKKEIK--VDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 368
L + + ++ +TL + + + G + V+
Sbjct: 345 HLTEAILWDQMPYLSKVMNIEVITLDQAPDGYAKFDKGSPAKFVID 390
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398 | Back alignment and structure |
|---|
Score = 150 bits (381), Expect = 4e-42
Identities = 90/407 (22%), Positives = 144/407 (35%), Gaps = 64/407 (15%)
Query: 5 AVAWEPNKPLVIEDVQVA-------PPQAGEVRIKILFTALCHTDAYTWSGKDP--EGLF 55
V + + + ++ + V +K++ T +C +D + G+ GL
Sbjct: 5 GVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQVGL- 63
Query: 56 PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAG 115
+LGHE G V G V +Q GD V + C C+ CK T +C V A G
Sbjct: 64 --VLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGG 121
Query: 116 VMMNDRKSRFSINGKPIYHFMGTSTFSQ--YTVVH--DVSVAKI----DPQAPLDKVCLL 167
G Y MG T Q Y +V D ++ K+ + + L
Sbjct: 122 -----------AYG---YVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKIRDLTCL 167
Query: 168 GCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 227
+PTG A V PGS V V G G VGLA A A+ GA+ VI D++P + A
Sbjct: 168 SDILPTGYHGAVT-AGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHA 226
Query: 228 KNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG---------------NVSVMR 271
K G + +Q+ L VD + + +G +V+
Sbjct: 227 KAQGFEI-ADLSLDTPLHEQIA-ALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLN 284
Query: 272 AALECCHKGWGTSVIVGV------AASGQEISTRPFQLVTGRVW-KGTAFGGFKS--RSQ 322
+ ++ G I G+ A + G W K +F ++
Sbjct: 285 SLMQVTRVA-GKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTPVMKY 343
Query: 323 VPWLVDKYMKKEIKVDEYV-THNMTLGEINEAFRYMHGGDCLRCVLK 368
L+ M I + E V ++L + + G + V+
Sbjct: 344 NRALMQAIMWDRINIAEVVGVQVISLDDAPRGYGEFDAGVPKKFVID 390
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 5e-34
Identities = 89/369 (24%), Positives = 144/369 (39%), Gaps = 47/369 (12%)
Query: 3 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL-FPCIL 59
+A V P L + D+ V P EVR+++ AL H D + G L P +L
Sbjct: 2 RAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVL 61
Query: 60 GHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLC--GKVRGATGAGVM 117
G + +G+V++VG GV PGD V+ C C+ C +G+ NLC ++ G G
Sbjct: 62 GADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHG-- 119
Query: 118 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA 177
T+++Y V+ + ++A ++ + T
Sbjct: 120 ----------------------TYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQM 157
Query: 178 VWNTAKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 236
V + V PG V V V +A + AK GA RVI K RAK G E V
Sbjct: 158 VVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETV 216
Query: 237 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE 295
N D + + LT G G D + G + ++ G G I G A+SG E
Sbjct: 217 NYTHPD--WPKEVRRLTGGKGADKVVDHTGALYFEG-VIKATANG-GRIAIAG-ASSGYE 271
Query: 296 ISTRPFQLVTGRV-WKGTAFGGFKSRSQVPWLVDKYMKKEIK--VDEYVTHNMTLGEINE 352
+ + ++ G+ S+S++ ++ + ++K V + + L E
Sbjct: 272 GTLPFAHVFYRQLSILGSTMA---SKSRLFPILRFVEEGKLKPVVGQV----LPLEAAAE 324
Query: 353 AFRYMHGGD 361
R +
Sbjct: 325 GHRLLEERR 333
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447 | Back alignment and structure |
|---|
Score = 126 bits (317), Expect = 1e-32
Identities = 59/399 (14%), Positives = 122/399 (30%), Gaps = 69/399 (17%)
Query: 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG------- 53
M K + K L + +V + EV + ++ +++ + ++ +
Sbjct: 37 MFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQN 96
Query: 54 -----------LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKT 102
+LG + +G+V G GV +PGDHVI + A E + G
Sbjct: 97 ARQGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVI-VHPAHVDEQEPATHGDG 155
Query: 103 NLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLD 162
L + R G ++Y VV + +
Sbjct: 156 MLGTEQRAWGFETN-----------FG----------GLAEYGVVRASQLLPKPAHLTWE 194
Query: 163 KVCLLGCGVPTGLGAV--WNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI 219
+ + T + A+++ G IV ++G G +G + K G + +
Sbjct: 195 EAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGG-IPVAVVS 253
Query: 220 DPKKFDRAKNFGVTEFVNPKDHD----------------KPIQQVLVDLTDGGVDYSFEC 263
+K + G +N + + + +++V+ D FE
Sbjct: 254 SAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEH 313
Query: 264 IGNVSVMRAALECCHKGWGTSVIVGVAASGQ-EISTRPFQLVTGRVWKGTAFGGFKSRSQ 322
G ++ +G GT V G ++ R + + G+ + +
Sbjct: 314 TGR-VTFGLSVIVARRG-GTVVTCGSSSGYLHTFDNRYL-WMKLKKIVGSHGA---NHEE 367
Query: 323 VPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
+ + ++ L E EA R +
Sbjct: 368 QQATNRLFESGAVVP--AMSAVYPLAEAAEACRVVQTSR 404
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 2e-31
Identities = 78/352 (22%), Positives = 128/352 (36%), Gaps = 43/352 (12%)
Query: 14 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL-FPCILGHEAAGIVESVGE 72
L + + V ++ ++ L +L + D L FP + + +G+VE+VG+
Sbjct: 41 LKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGK 100
Query: 73 GVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPI 132
VT +PGD VI + + +G+T + G GV
Sbjct: 101 SVTRFRPGDRVISTFAPGWLDGLRPGTGRTPA-YETLGGAHPGV---------------- 143
Query: 133 YHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAV 192
S+Y V+ + + L C T A+ + G V V
Sbjct: 144 --------LSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVV 195
Query: 193 FGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDL 252
G G V L + AKA GA VI +K DRA G +N + D + + L
Sbjct: 196 QGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGADHGINRLEED--WVERVYAL 252
Query: 253 TDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRV-WK 310
T G D+ E G + + +L+ G ++GV G E+S L+ +
Sbjct: 253 TGDRGADHILEIAGG-AGLGQSLKAVAPD-GRISVIGV-LEGFEVSGPVGPLLLKSPVVQ 309
Query: 311 GTAFGGFKSRSQVPWLVDKYMKKEIK--VDEYVTHNMTLGEINEAFRYMHGG 360
G + G R + LV + +K +D E+ EA ++ G
Sbjct: 310 GISVG---HRRALEDLVGAVDRLGLKPVIDMR----YKFTEVPEALAHLDRG 354
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 4e-31
Identities = 70/250 (28%), Positives = 107/250 (42%), Gaps = 32/250 (12%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
KA A+ +PL D+ P +V+I+I + +CH+D + + ++PC+ GH
Sbjct: 23 IKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGH 82
Query: 62 EAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 120
E G V +VG+ V + PGD V + C C+ C+ C+ G N C
Sbjct: 83 EIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYC--------------- 127
Query: 121 RKSRFSINGKPIYHFMGTST---FSQYTVVHDVSVAKI-DPQAPLDKVCLLGCGVPTGLG 176
+ N T +SQ VVH+ V +I PQ L V L C T
Sbjct: 128 DHMTGTYNSP--TPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGIT--- 182
Query: 177 AVWN---TAKVEPGSIVAVFGLGTVG-LAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 232
++ + PG V V G+G +G + + + A A GA V+ K + AK G
Sbjct: 183 -TYSPLRHWQAGPGKKVGVVGIGGLGHMGI-KLAHAMGA-HVVAFTTSEAKREAAKALGA 239
Query: 233 TEFVNPKDHD 242
E VN ++ D
Sbjct: 240 DEVVNSRNAD 249
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 8e-30
Identities = 62/392 (15%), Positives = 120/392 (30%), Gaps = 73/392 (18%)
Query: 9 EPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK------------------D 50
+P K + ++DV V GE + ++ +++ + +T +
Sbjct: 53 DPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAK 112
Query: 51 PEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRG 110
L ++G + AG+V G GV Q GD V+ + E + +
Sbjct: 113 RHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDG--HNDTMLDPEQR 170
Query: 111 ATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCG 170
G G ++ +V + ++ G
Sbjct: 171 IWGFET----------NFG----------GLAEIALVKSNQLMPKPDHLSWEEAAAPGLV 210
Query: 171 VPTGLGAV--WNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 227
T + N A ++ G V ++G G +G + A A GA I + P+K +
Sbjct: 211 NSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGA-NPICVVSSPQKAEIC 269
Query: 228 KNFGVTEFVNPKDHDKPIQQVLV---------------DLTDG-GVDYSFECIGNVSVMR 271
+ G ++ + +LT G +D FE G
Sbjct: 270 RAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGR-ETFG 328
Query: 272 AALECCHKGWGTSVIVGVAASGQ-EISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKY 330
A++ KG GT + E R ++ + G+ F + +
Sbjct: 329 ASVFVTRKG-GTITTCASTSGYMHEYDNRYL-WMSLKRIIGSHFA---NYREAWEANRLI 383
Query: 331 MKKEIK--VDEYVTHNMTLGEINEAFRYMHGG 360
K I + + +L + +A +H
Sbjct: 384 AKGRIHPTLSKVY----SLEDTGQAAYDVHRN 411
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 4e-29
Identities = 69/373 (18%), Positives = 122/373 (32%), Gaps = 83/373 (22%)
Query: 9 EPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK---DPEGLFPCILGHEAAG 65
+P K + ++++++A + +VR+K+L + +D G PE P + G+E
Sbjct: 37 DPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPE--LPAVGGNEGVA 94
Query: 66 IVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 125
V +VG VT ++PGD VIP
Sbjct: 95 QVVAVGSNVTGLKPGDWVIPA--------------------------------------- 115
Query: 126 SINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVE 185
G T+ V + ++ ++ PL LG T + + +++
Sbjct: 116 ---------NAGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQ 166
Query: 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI----DIDPKKFDRAKNFGVTEFVNPKD 240
PG V VG AV + A A G R I + K DR K+ G + ++
Sbjct: 167 PGDSVIQNASNSGVGQAVIQIAAALGL-RTINVVRDRPDIQKLSDRLKSLGAEHVITEEE 225
Query: 241 HDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTR 299
+P ++ D + C+G L +G GT V G + Q +
Sbjct: 226 LRRP--EMKNFFKDMPQPRLALNCVGG-KSSTELLRQLARG-GTMVTYG-GMAKQPVVAS 280
Query: 300 PFQLVTGRVWKGTAFGGF------------KSRSQVPWLVDKYMKKEIKVDEYVTHNMTL 347
L+ K GF + + + L D + ++ + L
Sbjct: 281 VSLLIF----KDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTA--PACSQVPL 334
Query: 348 GEINEAFRYMHGG 360
+ A
Sbjct: 335 QDYQSALEASMKP 347
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 1e-28
Identities = 69/251 (27%), Positives = 107/251 (42%), Gaps = 33/251 (13%)
Query: 1 MCKAAVAW---EPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPC 57
M + + ++ D +V I IL+ +CH+D ++ + EG++P
Sbjct: 1 MRVQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPM 60
Query: 58 ILGHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGV 116
I GHE AGI++ VG+GV + + GD V + C+ C+ CK CK + C
Sbjct: 61 IPGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFC----------- 109
Query: 117 MMNDRKSRFSINGKPIYHFMGTST---FSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 173
K F+ + +H +S VV + V +D APL+KV L C T
Sbjct: 110 ----TKVVFTYDCLDSFH-DNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGIT 164
Query: 174 GLGAVWN---TAKVEPGSIVAVFGLGTVG-LAVAEGAKAAGASRVIGIDIDPKKFDRAKN 229
++ +KV G+ V V G G +G +AV + A A GA V + K A +
Sbjct: 165 ----TYSPLKFSKVTKGTKVGVAGFGGLGSMAV-KYAVAMGA-EVSVFARNEHKKQDALS 218
Query: 230 FGVTEFVNPKD 240
GV F
Sbjct: 219 MGVKHFYTDPK 229
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 2e-28
Identities = 66/255 (25%), Positives = 103/255 (40%), Gaps = 42/255 (16%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
A + + L + +VR K+L+ +CH+D ++ ++P + GH
Sbjct: 17 AFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPLVPGH 76
Query: 62 EAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 120
E G V VG V +V GD V + C C C+ C + N C
Sbjct: 77 EIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYC--------------- 121
Query: 121 RKSRFSINGKPIYHFMGTST---FSQYTVVHDVSVAKIDPQAPLDKVCLLGC-GVPT--- 173
K + + GT T +S + V ++ + + PLD L C G+
Sbjct: 122 PKMILTYASI---YHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSP 178
Query: 174 ----GLGAVWNTAKVEPGSIVAVFGLGTVG-LAVAEGAKAAGASRVIGIDIDPKKFDRA- 227
GL EPG + + GLG +G +AV + AKA G+ +V I P K + A
Sbjct: 179 LKYFGLD--------EPGKHIGIVGLGGLGHVAV-KFAKAFGS-KVTVISTSPSKKEEAL 228
Query: 228 KNFGVTEFVNPKDHD 242
KNFG F+ +D +
Sbjct: 229 KNFGADSFLVSRDQE 243
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357 | Back alignment and structure |
|---|
Score = 108 bits (273), Expect = 5e-27
Identities = 64/253 (25%), Positives = 95/253 (37%), Gaps = 38/253 (15%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
A +P+ L + +V I+I+ +CHTD + +P + GH
Sbjct: 10 TTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPMVPGH 69
Query: 62 EAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 120
E G V VG V++ GD V + C C C C+ C
Sbjct: 70 EVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYC--------------- 114
Query: 121 RKSRFSINGKPIYHFMGTST---FSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA 177
K +S N + G T F++ TVVH V KI +++ L C T
Sbjct: 115 PKKIWSYNDV---YINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVT---- 167
Query: 178 V------WNTAKVEPGSIVAVFGLGTVG-LAVAEGAKAAGASRVIGIDIDPKKFDRA-KN 229
V + + PG + GLG VG + V + AKA G V I KK + A ++
Sbjct: 168 VYSPLSHFGLKQ--PGLRGGILGLGGVGHMGV-KIAKAMGH-HVTVISSSNKKREEALQD 223
Query: 230 FGVTEFVNPKDHD 242
G ++V D
Sbjct: 224 LGADDYVIGSDQA 236
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371 | Back alignment and structure |
|---|
Score = 104 bits (260), Expect = 4e-25
Identities = 63/385 (16%), Positives = 109/385 (28%), Gaps = 75/385 (19%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 62
A + ++ V +V +++ A+ +D S + LG +
Sbjct: 13 TALTVNDHDEVTVWNAAPCPMLPRDQVYVRVEAVAINPSD---TSMRGQFATPWAFLGTD 69
Query: 63 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRK 122
AG V +VG VT +Q GD V G
Sbjct: 70 YAGTVVAVGSDVTHIQVGDRV---------------------YGAQNEMCP--------- 99
Query: 123 SRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT--------- 173
FSQYTV AKI ++ L G+ T
Sbjct: 100 -----------RTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLG 148
Query: 174 -GLGAVWNTAKVEPGSIVAVF---GLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 229
L + V V G + + +G I P FD AK+
Sbjct: 149 LPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY-IPIAT-CSPHNFDLAKS 206
Query: 230 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV-- 287
G E + + + + Q + T + Y+ +CI NV + G V +
Sbjct: 207 RGAEEVFDYRAPN--LAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNP 264
Query: 288 -GVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVD------KYMKKEIKVDEY 340
A+ +++ T + L +G+ + R + + ++
Sbjct: 265 FPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRL 324
Query: 341 VTHNMT-----LGEINEAFRYMHGG 360
V H + I + + G
Sbjct: 325 VHHPLRVVQGGFDHIKQGMELVRKG 349
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 6e-25
Identities = 54/362 (14%), Positives = 109/362 (30%), Gaps = 66/362 (18%)
Query: 9 EPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK-DPEGLFPCILGHEAAGIV 67
P L +E + P + EV +++L + +D +G P I G+E GIV
Sbjct: 15 NPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVGIV 74
Query: 68 ESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSI 127
E+VG V+ G V+P G G
Sbjct: 75 ENVGAFVSRELIGKRVLP-------------------------LRGEG------------ 97
Query: 128 NGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPG 187
T+ +Y V I + T T ++
Sbjct: 98 ------------TWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRN 145
Query: 188 SIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQ 246
++ V +G A+ ++ R+I + + K + G ++ +
Sbjct: 146 DVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLGAAYVIDTSTAP--LY 202
Query: 247 QVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-- 303
+ +++LT+G G D + + IG G + +G SG +++
Sbjct: 203 ETVMELTNGIGADAAIDSIGGPDGNE-LAFSLRPN-GHFLTIG-LLSGIQVNWAEIVTKA 259
Query: 304 -VTGRVWKGTAFGGFKSRSQVPWLVDK----YMKKEIKVDEYVTHNMTLGEINEAFRYMH 358
V ++ + S + ++++ + V L ++ A +
Sbjct: 260 KVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMK-VHSTYELADVKAAVDVVQ 318
Query: 359 GG 360
Sbjct: 319 SA 320
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 9e-25
Identities = 53/246 (21%), Positives = 86/246 (34%), Gaps = 33/246 (13%)
Query: 4 AAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEA 63
A + E K P ++ IKI +C +D + +G P ++GHE
Sbjct: 11 AIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEI 70
Query: 64 AGIVESVGEGV-TEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
G V +G + ++ G V + C EC CK+ C
Sbjct: 71 VGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYC---------------T 115
Query: 122 KSRFSINGKPIYHFMGTST---FSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 178
K + + + G + ++ Y VH+ V I P L CG T V
Sbjct: 116 KFVTTYSQP---YEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLT----V 168
Query: 179 WN---TAKVEPGSIVAVFGLGTVG-LAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 234
++ PG V + GLG +G + +KA GA I +K + A G
Sbjct: 169 YSPLVRNGCGPGKKVGIVGLGGIGSMGT-LISKAMGA-ETYVISRSSRKREDAMKMGADH 226
Query: 235 FVNPKD 240
++ +
Sbjct: 227 YIATLE 232
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327 | Back alignment and structure |
|---|
Score = 97.3 bits (243), Expect = 4e-23
Identities = 72/376 (19%), Positives = 116/376 (30%), Gaps = 75/376 (19%)
Query: 1 MCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCI 58
M + P L + A P E++++ + D Y SG P P
Sbjct: 1 MATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSG 60
Query: 59 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 118
LG EAAGIV VG GV ++ GD V
Sbjct: 61 LGTEAAGIVSKVGSGVKHIKAGDRV----------------------------------- 85
Query: 119 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKV--CLLGCGVPTGLG 176
+Y +S + A + ++ L GL
Sbjct: 86 -------------VYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFL-----KGLT 127
Query: 177 A---VWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 232
+ T +++P G VGL + AKA GA ++IG +K A G
Sbjct: 128 VYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGA 186
Query: 233 TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 291
+ +N ++ D +++ ++T G V ++ +G +L+C + G V G +
Sbjct: 187 WQVINYREEDLV-ERLK-EITGGKKVRVVYDSVGR-DTWERSLDCLQRR-GLMVSFG-NS 241
Query: 292 SGQEISTRPFQLVTGRVWKGTAFGGF---KSRSQVPW----LVDKYMKKEIKVDEYVTHN 344
SG L T +R ++ L IKVD
Sbjct: 242 SGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQK 301
Query: 345 MTLGEINEAFRYMHGG 360
L + A +
Sbjct: 302 YPLKDAQRAHEILESR 317
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325 | Back alignment and structure |
|---|
Score = 95.3 bits (238), Expect = 2e-22
Identities = 71/302 (23%), Positives = 106/302 (35%), Gaps = 68/302 (22%)
Query: 1 MCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCI 58
M K P L D + P V ++ L D Y SG P P
Sbjct: 1 MAKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSG 60
Query: 59 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 118
LG E AG+VE+VG+ VT + GD V
Sbjct: 61 LGAEGAGVVEAVGDEVTRFKVGDRV----------------------------------- 85
Query: 119 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKV--CLLGCGVPTGLG 176
Y +S+ V+ + ++ K+ ++ +L GL
Sbjct: 86 -------------AYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAALML-----KGLT 127
Query: 177 A---VWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 232
+ T +V+PG I+ G VG + AKA GA ++IG P+K AK G
Sbjct: 128 VQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGA 186
Query: 233 TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 291
E ++ D ++VL +LTDG ++ +G +L+ G V G A
Sbjct: 187 WETIDYSHEDVA-KRVL-ELTDGKKCPVVYDGVGQ-DTWLTSLDSVAPR-GLVVSFG-NA 241
Query: 292 SG 293
SG
Sbjct: 242 SG 243
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334 | Back alignment and structure |
|---|
Score = 93.1 bits (232), Expect = 1e-21
Identities = 79/375 (21%), Positives = 126/375 (33%), Gaps = 75/375 (20%)
Query: 1 MCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCI 58
K + E + ED V E+ IK +T + + ++Y G P P +
Sbjct: 8 QQKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYPCEK-PYV 66
Query: 59 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 118
LG EA+G V + G+GVT + GD V
Sbjct: 67 LGREASGTVVAKGKGVTNFEVGDQVA---------------------------------- 92
Query: 119 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS-VAKIDPQAPLDKVCLLGCGVPT-GLG 176
++ STF+QY+ + V K+ P+ D+ L L
Sbjct: 93 ----------------YISNSTFAQYSKISSQGPVMKL-PKGTSDEELKLYAAGLLQVLT 135
Query: 177 A---VWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 232
A V+ G V +F G VGL + + K GA I + +K AK +G
Sbjct: 136 ALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKEYGA 194
Query: 233 TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 291
+N D +QVL T+G GVD SF+ +G +L + G V G A
Sbjct: 195 EYLINASKEDIL-RQVL-KFTNGKGVDASFDSVGK-DTFEISLAALKRK-GVFVSFG-NA 249
Query: 292 SGQEISTRPFQLVTGRVW--KGTAFGGFKSRSQVPW----LVDKYMKKEIKVDEYVTHNM 345
SG +L + + +G + + K++ + +
Sbjct: 250 SGLIPPFSITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIK--IYKTY 307
Query: 346 TLGEINEAFRYMHGG 360
L + A +
Sbjct: 308 PLRDYRTAAADIESR 322
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364 | Back alignment and structure |
|---|
Score = 92.4 bits (230), Expect = 4e-21
Identities = 43/322 (13%), Positives = 85/322 (26%), Gaps = 85/322 (26%)
Query: 9 EPNKPLVIEDVQVAPPQ--AGEVRIKILFTALCHTDAYTWSGK----------DPEGLFP 56
EP L + ++ EV +K L + + +D G
Sbjct: 14 EPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPA 73
Query: 57 CILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGV 116
G+E V VG V+ ++ GD VIP
Sbjct: 74 APCGNEGLFEVIKVGSNVSSLEAGDWVIPS------------------------------ 103
Query: 117 MMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA-----------PLDKVC 165
+ T+ + + +D K+ A +++
Sbjct: 104 ------------------HVNFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGA 145
Query: 166 LLGCGVPTGLGAVWNTAKVEPGSIVAVF--GLGTVGLAVAEGAKAAGASRVIGI----DI 219
+ T + + K+ PG + G VG ++ K I +
Sbjct: 146 TISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPN 204
Query: 220 DPKKFDRAKNFGVTEFVNPKDHD-KPIQQVLVDLTD---GGVDYSFECIGNVSVMRAALE 275
+ K G T+ + ++ + + + G + C+G
Sbjct: 205 LDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGG-KSSTGIAR 263
Query: 276 CCHKGWGTSVIVGVAASGQEIS 297
+ G + G S Q ++
Sbjct: 264 KLNNN-GLMLTYG-GMSFQPVT 283
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333 | Back alignment and structure |
|---|
Score = 90.8 bits (226), Expect = 1e-20
Identities = 72/305 (23%), Positives = 109/305 (35%), Gaps = 69/305 (22%)
Query: 1 MCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSG---KDPEGLF 55
M AAV + P V E+V+V P G+VR++ + D Y +G G
Sbjct: 1 MVMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEP 60
Query: 56 PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAG 115
P ++G EAA +VE VG GVT+ G+ V
Sbjct: 61 PIVVGFEAAAVVEEVGPGVTDFTVGERV-------------------------------- 88
Query: 116 VMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI-----DPQAPLDKVCLLGCG 170
+SQ + + K+ L + L G
Sbjct: 89 ----------------CTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGM- 131
Query: 171 VPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 229
T + T KV+PG V + G +G + A+ GA VIG +K + A+
Sbjct: 132 --TAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARK 188
Query: 230 FGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVG 288
G +N D + V ++T G GVD ++ IG ++ +L+C G G
Sbjct: 189 LGCHHTINYSTQDFA-EVVR-EITGGKGVDVVYDSIGK-DTLQKSLDCLRPR-GMCAAYG 244
Query: 289 VAASG 293
ASG
Sbjct: 245 -HASG 248
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342 | Back alignment and structure |
|---|
Score = 88.0 bits (219), Expect = 9e-20
Identities = 70/373 (18%), Positives = 119/373 (31%), Gaps = 76/373 (20%)
Query: 3 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK--DPEGLFPCI 58
KA A + P LV DV+ V + + +C D G+ P +
Sbjct: 23 KAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEP-PFV 81
Query: 59 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 118
G E AG+V S EG + ++PGD V+ G
Sbjct: 82 PGIETAGVVRSAPEG-SGIKPGDRVM-------------------------AFNFIG--- 112
Query: 119 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 178
+++ V ++ PQ + L T A
Sbjct: 113 ---------------------GYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAY 151
Query: 179 WNTAKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237
++ G V V G G +G A + AK GA +VI + + K+ G +
Sbjct: 152 ARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVGADIVLP 210
Query: 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGW-GTSVIVGVAASGQE 295
++ + + + T G GVD + IG A+ G ++VG A+G
Sbjct: 211 ---LEEGWAKAVREATGGAGVDMVVDPIGG-PAFDDAVRTL--ASEGRLLVVG-FAAG-G 262
Query: 296 ISTRPFQL-------VTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLG 348
I T + G W + ++K + + ++ V+ + L
Sbjct: 263 IPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEGMRP--PVSARIPLS 320
Query: 349 EINEAFRYMHGGD 361
E +A + G
Sbjct: 321 EGRQALQDFADGK 333
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321 | Back alignment and structure |
|---|
Score = 86.9 bits (216), Expect = 2e-19
Identities = 59/375 (15%), Positives = 110/375 (29%), Gaps = 89/375 (23%)
Query: 3 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-----EGLF 55
KA + P L + D + ++ IK+ +L D T +G +
Sbjct: 8 KAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNL 67
Query: 56 PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAG 115
P LG++ +G V +G V V GD V G
Sbjct: 68 PSGLGYDFSGEVIELGSDVNNVNIGDKV---------------------MGIAGFPDHPC 106
Query: 116 VMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP------QAPLDKVCLLGC 169
+++Y ++ + QA
Sbjct: 107 ------------------------CYAEYVCASPDTIIQK-LEKLSFLQA---------A 132
Query: 170 GVPTGLGAVWN---TAKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFD 225
+PT A+V+ G +V + G VG + AK G VI +
Sbjct: 133 SLPTAGLTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTA-SKRNHA 190
Query: 226 RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSV 285
K G + +N + D + VD + +G V +++C + G V
Sbjct: 191 FLKALGAEQCINYHEED------FLLAISTPVDAVIDLVGG-DVGIQSIDCLKET-GCIV 242
Query: 286 IVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNM 345
V +G+ I + + ++ +L + ++++ ++
Sbjct: 243 SVPTITAGRVIEVAKQKHRRAFGLLKQF-----NIEELHYLGKLVSEDKLRI--EISRIF 295
Query: 346 TLGEINEAFRYMHGG 360
L E A + G
Sbjct: 296 QLSEAVTAHELLETG 310
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 3e-18
Identities = 62/372 (16%), Positives = 108/372 (29%), Gaps = 85/372 (22%)
Query: 14 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGE 72
+ D V P G++ ++ F + +D +G+ P +G E G V ++G
Sbjct: 41 TLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALGL 100
Query: 73 GVTE-VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKP 131
+ G V
Sbjct: 101 SASARYTVGQAVA----------------------------------------------- 113
Query: 132 IYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP--TGLGAVWNTAKVEPGSI 189
+M +F++YTVV + P L V T ++ + G
Sbjct: 114 ---YMAPGSFAEYTVVPASIATPVPSVKPE----YLTLLVSGTTAYISLKELGGLSEGKK 166
Query: 190 VAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQV 248
V V G G + +K A VIG +K K+ G +N K + V
Sbjct: 167 VLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKSLGCDRPINYKTEP--VGTV 223
Query: 249 LVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGR- 307
L GVD +E +G ++ A++ G +++G + + V
Sbjct: 224 LKQEYPEGVDVVYESVGG-AMFDLAVDALATK-GRLIVIGFIS--GYQTPTGLSPVKAGT 279
Query: 308 -----VWKGTAFGGFKSRSQV-----------PWLVDKYMKKEIKVDEYVTHNMTLG--E 349
+ K + GF + V + E+ + + G
Sbjct: 280 LPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLES 339
Query: 350 INEAFRYMHGGD 361
I A YM+ G
Sbjct: 340 IFRAVNYMYMGK 351
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349 | Back alignment and structure |
|---|
Score = 83.1 bits (206), Expect = 6e-18
Identities = 38/304 (12%), Positives = 73/304 (24%), Gaps = 65/304 (21%)
Query: 9 EPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK--DPEGLFPCILGHEAAGI 66
L + V P +V IK+ ++ +D G+ P G E G
Sbjct: 32 AMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVK-GRPAGFEGVGT 90
Query: 67 VESVGEGV-TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 125
+ + G+ + G V G + G
Sbjct: 91 IVAGGDEPYAKSLVGKRVAF----------------------ATGLSNWG---------- 118
Query: 126 SINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN---TA 182
++++Y V + + + G +
Sbjct: 119 --------------SWAEYAVAEAAACIPLLDTVRDED----GAAMIVNPLTAIAMFDIV 160
Query: 183 KVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
K E + + + AK G R I ++ K+ G +N K
Sbjct: 161 KQEGEKAFVMTAGASQLCKLIIGLAKEEGF-RPIVTVRRDEQIALLKDIGAAHVLNEKAP 219
Query: 242 DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP 300
D + L ++ + + + A K +I G R
Sbjct: 220 D--FEATLREVMKAEQPRIFLDAVTG-PLASAIFNAMPKR-ARWIIYG-RLDPDATVIRE 274
Query: 301 FQLV 304
+
Sbjct: 275 PGQL 278
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351 | Back alignment and structure |
|---|
Score = 80.7 bits (200), Expect = 3e-17
Identities = 60/307 (19%), Positives = 108/307 (35%), Gaps = 70/307 (22%)
Query: 1 MCKAAVAWEPNKP--LVIE-DVQVAPPQAGEVRIKILFTALCHTDAYTWSGK--DPEGLF 55
+ +A +E P L + D+ V P+ +V IK+ + + Y SG L
Sbjct: 29 LMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLL- 87
Query: 56 PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAG 115
P G + AG++E+VG+ + + GD V G
Sbjct: 88 PYTPGSDVAGVIEAVGDNASAFKKGDRVF--------------------TSSTIS--GG- 124
Query: 116 VMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGL 175
+++Y + D +V K+ + + G +
Sbjct: 125 -------------------------YAEYALAADHTVYKLPEKLDFKQ----GAAIGIPY 155
Query: 176 GAVW----NTAKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF 230
+ ++A V+ G V V G G VGLA + A+A G +++G +
Sbjct: 156 FTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQN 214
Query: 231 GVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 289
G E N ++ + + G+D E + NV++ + L G G ++VG
Sbjct: 215 GAHEVFNHREVN--YIDKIKKYVGEKGIDIIIEMLANVNLSK-DLSLLSHG-GRVIVVG- 269
Query: 290 AASGQEI 296
+ EI
Sbjct: 270 SRGTIEI 276
|
| >4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 79.2 bits (196), Expect = 1e-16
Identities = 70/392 (17%), Positives = 116/392 (29%), Gaps = 96/392 (24%)
Query: 3 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK--DPEGLFPCI 58
+A V L + + PQ GE++I++ L D G +P P +
Sbjct: 5 RAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKT-PLV 63
Query: 59 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 118
G E +GIVE++G+ V + GD V V A
Sbjct: 64 PGFECSGIVEALGDSVKGYEIGDRV---------------------MAFVNY--NA---- 96
Query: 119 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 178
+++ V KI + P
Sbjct: 97 ----------------------WAEVVCTPVEFVYKIPDDMSFSE----AAAFPMNFVTA 130
Query: 179 WN----TAKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 233
+ A + G V V G VG AVA+ V G K + K+
Sbjct: 131 YVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKH-EAIKDSV-- 187
Query: 234 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 293
+ ++ D Q + ++ GVD +C+ + + L GT ++ G +
Sbjct: 188 THLFDRNAD--YVQEVKRISAEGVDIVLDCLCGDNTGK-GLSLLKPL-GTYILYGSSNMV 243
Query: 294 QEISTRPFQL---------------------VTGRVWKGTAFGGFKS---RSQVPWLVDK 329
+ F + G F ++ R V L+
Sbjct: 244 TGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGL 303
Query: 330 YMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD 361
Y +K+IK V L E+ EA + +H
Sbjct: 304 YNQKKIKP--VVDSLWALEEVKEAMQRIHDRG 333
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343 | Back alignment and structure |
|---|
Score = 78.0 bits (193), Expect = 2e-16
Identities = 60/280 (21%), Positives = 92/280 (32%), Gaps = 80/280 (28%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSG--KDPEGLFPCILG 60
AAV E N P V+ + P G+V ++I + DA +G + P ILG
Sbjct: 9 IAAVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILG 68
Query: 61 HEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 120
+ AG V +VG V + GD V G G G
Sbjct: 69 MDLAGTVVAVGPEVDSFRVGDAV---------------------FGLTGGVGGLQ----- 102
Query: 121 RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP------QAPLDKVCLLGCGVPTG 174
G T +Q+ V +A P QA +P
Sbjct: 103 --------G----------THAQFAAVDARLLASK-PAALTMRQA---------SVLPLV 134
Query: 175 LGAVW----NTAKVEPGSIVAVF----GLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR 226
W + A+V+ G V + G+G V + + A A GA RV +
Sbjct: 135 FITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQI---ALARGA-RVFATA-RGSDLEY 189
Query: 227 AKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG 265
++ G T ++ + + T G G D ++ +G
Sbjct: 190 VRDLGATPIDASREPE----DYAAEHTAGQGFDLVYDTLG 225
|
| >3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315 | Back alignment and structure |
|---|
Score = 72.6 bits (179), Expect = 1e-14
Identities = 33/282 (11%), Positives = 61/282 (21%), Gaps = 95/282 (33%)
Query: 3 KAAVAWE---PNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCIL 59
+ W + + V + A ++ ++ + D +
Sbjct: 3 EQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWSNGHVP 62
Query: 60 GHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 119
G + AG++ VG V G V
Sbjct: 63 GVDGAGVIVKVGAKVDSKMLGRRVA----------------------------YHT---- 90
Query: 120 DRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI-----DPQA---PLDKVCLLGCGV 171
+G +F+++TV++ V + +A P
Sbjct: 91 ----SLKRHG----------SFAEFTVLNTDRVMTLPDNLSFERAAALPC---------- 126
Query: 172 PTGLGAVW---NTAKVEPGSIVAVFGLGTVG-----LAVAEGAKAAGASRVIGIDIDPKK 223
L A W + V + G G V + G S
Sbjct: 127 -PLLTA-WQAFEKIPLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVSA-------SLS 177
Query: 224 FDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265
A GV + Q F+ +
Sbjct: 178 QALAAKRGVRHLY---REPSQVTQ--------KYFAIFDAVN 208
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379 | Back alignment and structure |
|---|
Score = 72.7 bits (178), Expect = 2e-14
Identities = 41/301 (13%), Positives = 72/301 (23%), Gaps = 90/301 (29%)
Query: 14 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSG--------------------KDPEG 53
L ++ + P EV I+I + L +D G + PEG
Sbjct: 20 LSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEG 79
Query: 54 LF---------PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNL 104
+G+E AG+V G +
Sbjct: 80 AMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAA------------------ 121
Query: 105 CGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKV 164
+G + +SQY + + A
Sbjct: 122 -------------------------------IGGAMYSQYRCIPADQCLVLPEGATPAD- 149
Query: 165 CLLGCGVPTGLGAVWN---TAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID 220
G T ++E S + +G + + G +++ I
Sbjct: 150 ---GASSFVNPLTALGMVETMRLEGHSALVHTAAASNLGQMLNQICLKDGI-KLVNIVRK 205
Query: 221 PKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHK 279
++ D K G N Q L + G +F+ G + L C
Sbjct: 206 QEQADLLKAQGAVHVCNAASPT--FMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEA 263
Query: 280 G 280
Sbjct: 264 A 264
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353 | Back alignment and structure |
|---|
Score = 69.2 bits (170), Expect = 3e-13
Identities = 53/273 (19%), Positives = 83/273 (30%), Gaps = 68/273 (24%)
Query: 3 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK--DPEGLFPCI 58
+ P +VI + GEV ++ + D G P+ I
Sbjct: 30 RFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDA-SPI 88
Query: 59 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 118
LG E +G + VG GV+ GD V CG G GA
Sbjct: 89 LGLELSGEIVGVGPGVSGYAVGDKV---------------------CGLANG--GA---- 121
Query: 119 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP----TG 174
+++Y ++ + K +P T
Sbjct: 122 ----------------------YAEYCLLPAGQILPFPKGYDAVK----AAALPETFFTV 155
Query: 175 LGAVWNTAKVEPGSIVAVFGLGT--VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 232
++ A + G V + G GT +G + A+A GA V K + + G
Sbjct: 156 WANLFQMAGLTEGESVLIHG-GTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERLGA 213
Query: 233 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265
+N + D V+ T GVD + IG
Sbjct: 214 KRGINYRSED--FAAVIKAETGQGVDIILDMIG 244
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354 | Back alignment and structure |
|---|
Score = 62.6 bits (153), Expect = 4e-11
Identities = 76/383 (19%), Positives = 119/383 (31%), Gaps = 87/383 (22%)
Query: 3 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK--DPEGLFPCI 58
A +P P L +++V P GEV +K+ +AL D G+ P G I
Sbjct: 24 LAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGA-SNI 82
Query: 59 LGHEAAGIVESVGEGV-TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 117
LG EA+G V +G G + GD + G G
Sbjct: 83 LGLEASGHVAELGPGCQGHWKIGDTA---------------------MALLPG--GG--- 116
Query: 118 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP----T 173
+QY V + + I L + +P T
Sbjct: 117 -----------------------QAQYVTVPEGLLMPIPEGLTLTQ----AAAIPEAWLT 149
Query: 174 GLGAVWNTAKVEPGSIVAVFGLGT--VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG 231
+ V+ G V + G VG A + + AGA + KK A+ G
Sbjct: 150 AFQLLHLVGNVQAGDYVLIHA-GLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKLG 207
Query: 232 VTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290
N K D + + T G GV+ +CIG S + C G V+ G+
Sbjct: 208 AAAGFNYKKED--FSEATLKFTKGAGVNLILDCIGG-SYWEKNVNCLALD-GRWVLYGL- 262
Query: 291 ASGQEISTRPFQLVTGR--VWKGTAFGG----FKS------RSQVPWLVDKYMKKEIKVD 338
G +I+ F + + + +K Q+ + +
Sbjct: 263 MGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLP- 321
Query: 339 EYVTHNMTLGEINEAFRYMHGGD 361
+ + EI EA +YM
Sbjct: 322 -VLDRIYPVTEIQEAHKYMEANK 343
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302 | Back alignment and structure |
|---|
Score = 61.8 bits (151), Expect = 5e-11
Identities = 59/377 (15%), Positives = 95/377 (25%), Gaps = 103/377 (27%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK--DPEGLFPCILG 60
KA V PL + D+ + GEV +++ L D G P I G
Sbjct: 2 KAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHP-PFIPG 60
Query: 61 HEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 120
E G+VE G G
Sbjct: 61 MEVVGVVE-----------GRRYA-------------------------ALVPQG----- 79
Query: 121 RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN 180
++ V ++ + ++ P +
Sbjct: 80 -------------------GLAERVAVPKGALLPLPEGLSPEE----AAAFPVSFLTAYL 116
Query: 181 ---TAKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 236
A+ PG V V G +G A + A+A G RV+ P+K G E
Sbjct: 117 ALKRAQARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAA 175
Query: 237 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE 295
+ + G+D E G + +L G G V +G A E
Sbjct: 176 TYAEVPE-------RAKAWGGLDLVLEVRG--KEVEESLGLLAHG-GRLVYIGAA--EGE 223
Query: 296 ISTRPFQLV----------TGRVWKGTAFGGFKSRSQV-PWLVDKYMKKEIKVDEYVTHN 344
++ P + ++ + P L ++ V
Sbjct: 224 VAPIPPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRL-------GRELRPVVGPV 276
Query: 345 MTLGEINEAFRYMHGGD 361
E AFR +
Sbjct: 277 FPFAEAEAAFRALLDRG 293
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 5e-11
Identities = 19/75 (25%), Positives = 37/75 (49%)
Query: 9 EPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVE 68
+ L+ ++ P ++ +++ ++ D P+G ++G++AAGIV
Sbjct: 35 TDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWKVIGYDAAGIVS 94
Query: 69 SVGEGVTEVQPGDHV 83
+VG VT +PGD V
Sbjct: 95 AVGPDVTLFRPGDEV 109
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 3e-10
Identities = 62/406 (15%), Positives = 113/406 (27%), Gaps = 112/406 (27%)
Query: 3 KAAVAWEPNKPLVI---EDVQV-APPQAGEVRIKILFTALCHTDAYTWSGKDPEGL---- 54
A V + K V+ +++ + EV +K+ ++ D SG L
Sbjct: 23 MAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKR 82
Query: 55 -----------FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTN 103
FP LG + +G+V G V +PGD V
Sbjct: 83 DPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAV---------------- 126
Query: 104 LCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI-----DPQ 158
G T S++ VV V+ Q
Sbjct: 127 ------PPWKQG------------------------TLSEFVVVSGNEVSHKPKSLTHTQ 156
Query: 159 APLDKVCLLGCGVP----TGLGAVWNTAKVEPGSIVA--VF---GLGTVGLAVAEGAKAA 209
A +P T A+ + + V G VG + KA
Sbjct: 157 A---------ASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAW 207
Query: 210 GASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSV 269
A V + + + G + ++ K +++ L L D+ + +G +
Sbjct: 208 DA-HVTAVC-SQDASELVRKLGADDVIDYKSGS--VEEQLKSL--KPFDFILDNVGGSTE 261
Query: 270 MRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDK 329
A K W + V + + ++ + G + G G + + +
Sbjct: 262 TWAPD--FLKKWSGATYVTL-VTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYR 318
Query: 330 YMK--------KEIK--VDE-----YVTHNMTLGEINEAFRYMHGG 360
+ +I VD + ++ EAF + G
Sbjct: 319 WAFFMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERG 364
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 5e-10
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Query: 3 KAAVAWEP-----NKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPC 57
KA +P ++ + P+ E+ +KI ++ D + P
Sbjct: 4 KAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMDVSK--APR 61
Query: 58 ILGHEAAGIVESVGEGVTEVQPGDHV 83
+LG +A G+VESVG VT GD V
Sbjct: 62 VLGFDAIGVVESVGNEVTMFNQGDIV 87
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 2e-09
Identities = 28/71 (39%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Query: 14 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 73
LV E AP GEVRI + + DA G P LG E AG+V G G
Sbjct: 226 LVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYPG---VASLGSEGAGVVVETGPG 282
Query: 74 VTEVQPGDHVI 84
VT + PGD V+
Sbjct: 283 VTGLAPGDRVM 293
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} Length = 118 | Back alignment and structure |
|---|
Score = 44.4 bits (105), Expect = 5e-06
Identities = 19/92 (20%), Positives = 30/92 (32%), Gaps = 7/92 (7%)
Query: 190 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV-TEFVNPKDHDKPIQQV 248
+ V G G +G +A K + V D D GV T+ V+ KD + +
Sbjct: 8 ICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKAL 67
Query: 249 L-VDLTDGGVDYSFECIGNVSVMRAALEC-CH 278
D + + +AA H
Sbjct: 68 GGFDAVISAAPFFL----TPIIAKAAKAAGAH 95
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* Length = 144 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 6e-05
Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 190 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG 231
AV GLG G ++ + G V+ +DI+ +K + ++
Sbjct: 9 FAVIGLGRFGGSIVKELHRMGHE-VLAVDINEEKVNAYASYA 49
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} Length = 141 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 8e-05
Identities = 10/42 (23%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 190 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG 231
V G G+ + AAG +V+ +D +K + ++ G
Sbjct: 9 YIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDEG 49
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* Length = 357 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 1e-04
Identities = 32/142 (22%), Positives = 53/142 (37%), Gaps = 15/142 (10%)
Query: 143 QYTVVHDVSVAKIDPQ-APLDKVCLLGC-GVP--TGLGAVWNTAKVEPGSIVAVF---GL 195
++ S+ K+DPQ LG G+P T L + + GS +
Sbjct: 111 TKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAA 170
Query: 196 GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTD 254
G G + G SRV+GI +K + G +N K + + + L +
Sbjct: 171 GACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDN--VAEQLRESCP 228
Query: 255 GGVDYSFECIGNV--SVMRAAL 274
GVD F+ NV ++ +
Sbjct: 229 AGVDVYFD---NVGGNISDTVI 247
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} Length = 293 | Back alignment and structure |
|---|
Score = 41.9 bits (98), Expect = 2e-04
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 177 AVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 233
A+ +T G+ VAV GLG VG++VA A GA +V + R G+
Sbjct: 145 AIQHTDFTIHGANVAVLGLGRVGMSVARKFAALGA-KVKVGARESDLLARIAEMGME 200
|
| >3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A* Length = 298 | Back alignment and structure |
|---|
Score = 40.6 bits (94), Expect = 5e-04
Identities = 9/47 (19%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Query: 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 228
+ G G G + L + G RV ++I+P + ++
Sbjct: 118 GRFRRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSR 163
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} Length = 300 | Back alignment and structure |
|---|
Score = 40.2 bits (94), Expect = 6e-04
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Query: 177 AVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 235
A+ +T GS VAV GLG G+ +A A GA V R G+ F
Sbjct: 147 AIQHTDYTIHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARSSAHLARITEMGLVPF 204
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} Length = 183 | Back alignment and structure |
|---|
Score = 39.4 bits (92), Expect = 6e-04
Identities = 9/43 (20%), Positives = 20/43 (46%)
Query: 190 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 232
V + G+G +G + +A +GI+I + + ++ G
Sbjct: 42 VLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGR 84
|
| >1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A* Length = 355 | Back alignment and structure |
|---|
Score = 40.2 bits (95), Expect = 8e-04
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 233
G V V GLG VG ++A A AGA +++ D D ++ A G T
Sbjct: 175 GLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHT 220
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 371 | |||
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 100.0 | |
| 1p0f_A | 373 | NADP-dependent alcohol dehydrogenase; ADH topology | 100.0 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 100.0 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 100.0 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 100.0 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 100.0 | |
| 1f8f_A | 371 | Benzyl alcohol dehydrogenase; rossmann fold, oxido | 100.0 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 100.0 | |
| 3fpc_A | 352 | NADP-dependent alcohol dehydrogenase; oxydoreducta | 100.0 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 100.0 | |
| 4a2c_A | 346 | Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc | 100.0 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 100.0 | |
| 3jv7_A | 345 | ADH-A; dehydrogenase, nucleotide binding, rossmann | 100.0 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 100.0 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 100.0 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 100.0 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 100.0 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 100.0 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 100.0 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 100.0 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 100.0 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 100.0 | |
| 4eez_A | 348 | Alcohol dehydrogenase 1; site-saturation mutagenes | 100.0 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 100.0 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 100.0 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 100.0 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 100.0 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 100.0 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 100.0 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 100.0 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 100.0 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 100.0 | |
| 1kol_A | 398 | Formaldehyde dehydrogenase; oxidoreductase; HET: N | 100.0 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 100.0 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 100.0 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 100.0 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 100.0 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 100.0 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 100.0 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 100.0 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 100.0 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 100.0 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 100.0 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 100.0 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 100.0 | |
| 4a27_A | 349 | Synaptic vesicle membrane protein VAT-1 homolog-L; | 100.0 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 100.0 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 100.0 | |
| 3goh_A | 315 | Alcohol dehydrogenase, zinc-containing; NP_718042. | 100.0 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 100.0 | |
| 4dvj_A | 363 | Putative zinc-dependent alcohol dehydrogenase Pro; | 100.0 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 100.0 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 100.0 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 100.0 | |
| 1zsy_A | 357 | Mitochondrial 2-enoyl thioester reductase; medium- | 100.0 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 100.0 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 100.0 | |
| 3nx4_A | 324 | Putative oxidoreductase; csgid, structural genomic | 100.0 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 100.0 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 100.0 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 100.0 | |
| 1tt7_A | 330 | YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st | 100.0 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 100.0 | |
| 3iup_A | 379 | Putative NADPH:quinone oxidoreductase; YP_296108.1 | 100.0 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 100.0 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 100.0 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 100.0 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 100.0 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 100.0 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 100.0 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 99.88 | |
| 2yvl_A | 248 | TRMI protein, hypothetical protein; tRNA, methyltr | 99.12 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 98.81 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 98.75 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 98.57 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 98.53 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 98.51 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 98.39 | |
| 3ce6_A | 494 | Adenosylhomocysteinase; protein-substrate complex, | 98.37 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 98.1 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 98.09 | |
| 1o54_A | 277 | SAM-dependent O-methyltransferase; TM0748, structu | 98.03 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 97.94 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 97.92 | |
| 3fpf_A | 298 | Mtnas, putative uncharacterized protein; thermonic | 97.91 | |
| 3gvp_A | 435 | Adenosylhomocysteinase 3; protein CO-factor comple | 97.8 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.78 | |
| 2b25_A | 336 | Hypothetical protein; structural genomics, methyl | 97.72 | |
| 3mb5_A | 255 | SAM-dependent methyltransferase; RNA methyltransfe | 97.67 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 97.65 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 97.64 | |
| 3n58_A | 464 | Adenosylhomocysteinase; ssgcid, hydrolase, structu | 97.6 | |
| 1p91_A | 269 | Ribosomal RNA large subunit methyltransferase A; R | 97.57 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 97.54 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 97.54 | |
| 2pwy_A | 258 | TRNA (adenine-N(1)-)-methyltransferase; mtase, ado | 97.53 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 97.5 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 97.46 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 97.45 | |
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 97.43 | |
| 1i9g_A | 280 | Hypothetical protein RV2118C; mtase, adoMet, cryst | 97.43 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 97.37 | |
| 2nyu_A | 196 | Putative ribosomal RNA methyltransferase 2; SAM, s | 97.25 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 97.21 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 97.19 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 97.19 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 97.19 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 97.19 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 97.17 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 97.16 | |
| 3h9u_A | 436 | Adenosylhomocysteinase; NAD CO-factor complex, str | 97.14 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 97.13 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 97.13 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 97.12 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 97.06 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 97.05 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 97.04 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 97.03 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 97.03 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 97.03 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 97.03 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 97.01 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 96.98 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 96.98 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 96.97 | |
| 1c1d_A | 355 | L-phenylalanine dehydrogenase; amino acid dehydrog | 96.95 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 96.94 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 96.94 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 96.93 | |
| 3njr_A | 204 | Precorrin-6Y methylase; methyltransferase, decarbo | 96.92 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 96.91 | |
| 3e05_A | 204 | Precorrin-6Y C5,15-methyltransferase (decarboxyla; | 96.9 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 96.9 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 96.89 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 96.89 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 96.88 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 96.88 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 96.87 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 96.86 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 96.86 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 96.85 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 96.85 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 96.83 | |
| 3hm2_A | 178 | Precorrin-6Y C5,15-methyltransferase; alpha-beta-s | 96.83 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 96.83 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 96.82 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 96.82 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 96.81 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 96.81 | |
| 2fk8_A | 318 | Methoxy mycolic acid synthase 4; S-adenosylmethion | 96.8 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 96.8 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 96.79 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 96.78 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 96.77 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 96.77 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 96.75 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 96.75 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 96.75 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 96.75 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 96.74 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 96.73 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 96.72 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 96.72 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 96.71 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 96.7 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 96.7 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 96.7 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 96.7 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 96.69 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 96.69 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 96.69 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 96.68 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 96.68 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 96.68 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 96.68 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 96.68 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 96.68 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 96.66 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 96.66 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 96.64 | |
| 2gpy_A | 233 | O-methyltransferase; structural genomics, PSI, pro | 96.64 | |
| 3dr5_A | 221 | Putative O-methyltransferase; Q8NRD3, CGL1119, PF0 | 96.64 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 96.64 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 96.63 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 96.63 | |
| 1jg1_A | 235 | PIMT;, protein-L-isoaspartate O-methyltransferase; | 96.62 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 96.62 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 96.62 | |
| 3grz_A | 205 | L11 mtase, ribosomal protein L11 methyltransferase | 96.61 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 96.61 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 96.61 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 96.6 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 96.6 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 96.6 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 96.59 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 96.57 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 96.57 | |
| 1wwk_A | 307 | Phosphoglycerate dehydrogenase; riken structural g | 96.56 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 96.56 | |
| 1vl6_A | 388 | Malate oxidoreductase; TM0542, NAD-dependent malic | 96.56 | |
| 2hnk_A | 239 | SAM-dependent O-methyltransferase; modified rossma | 96.54 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 96.53 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 96.53 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 96.52 | |
| 3d64_A | 494 | Adenosylhomocysteinase; structural genomics, ssgci | 96.52 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 96.52 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 96.51 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 96.51 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 96.51 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 96.51 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 96.51 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 96.51 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 96.5 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 96.49 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 96.49 | |
| 3orh_A | 236 | Guanidinoacetate N-methyltransferase; structura ge | 96.49 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 96.48 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 96.47 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 96.47 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 96.47 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 96.46 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 96.46 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 96.46 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 96.46 | |
| 2yxe_A | 215 | Protein-L-isoaspartate O-methyltransferase; rossma | 96.44 | |
| 1kpg_A | 287 | CFA synthase;, cyclopropane-fatty-acyl-phospholipi | 96.44 | |
| 3ujc_A | 266 | Phosphoethanolamine N-methyltransferase; parasite; | 96.43 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 96.43 | |
| 1v8b_A | 479 | Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2 | 96.43 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 96.42 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 96.42 | |
| 3tfw_A | 248 | Putative O-methyltransferase; PSI-biology, nysgrc, | 96.41 | |
| 3hem_A | 302 | Cyclopropane-fatty-acyl-phospholipid synthase 2; p | 96.41 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 96.41 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 96.4 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 96.4 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 96.4 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 96.39 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 96.39 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 96.39 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 96.39 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 96.38 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 96.38 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 96.37 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 96.37 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 96.35 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 96.34 | |
| 3lbf_A | 210 | Protein-L-isoaspartate O-methyltransferase; modifi | 96.34 | |
| 2ekl_A | 313 | D-3-phosphoglycerate dehydrogenase; structural gen | 96.32 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 96.31 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 96.31 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 96.31 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 96.31 | |
| 1nvm_B | 312 | Acetaldehyde dehydrogenase (acylating), 4-hydroxy- | 96.3 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 96.3 | |
| 3tum_A | 269 | Shikimate dehydrogenase family protein; rossmann-f | 96.28 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 96.28 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 96.28 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 96.27 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 96.26 | |
| 3eey_A | 197 | Putative rRNA methylase; rRNA methylation, S-adeno | 96.26 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 96.26 | |
| 2pbf_A | 227 | Protein-L-isoaspartate O-methyltransferase beta-A | 96.26 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 96.26 | |
| 3l07_A | 285 | Bifunctional protein fold; structural genomics, ID | 96.25 | |
| 2avd_A | 229 | Catechol-O-methyltransferase; structural genomics, | 96.25 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 96.25 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 96.25 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 96.24 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 96.23 | |
| 1leh_A | 364 | Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi | 96.23 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 96.23 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 96.23 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 96.22 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 96.22 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 96.22 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 96.22 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 96.2 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 96.2 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 96.19 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 96.19 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 96.19 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 96.18 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 96.18 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 96.18 | |
| 3dfz_A | 223 | SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase | 96.17 | |
| 1fbn_A | 230 | MJ fibrillarin homologue; MJ proteins, ribosomal R | 96.17 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 96.17 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 96.17 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 96.17 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 96.16 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 96.15 | |
| 2dbq_A | 334 | Glyoxylate reductase; D-3-phosphoglycerate dehydro | 96.15 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 96.15 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 96.13 | |
| 4a26_A | 300 | Putative C-1-tetrahydrofolate synthase, cytoplasm; | 96.12 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 96.12 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 96.12 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 96.09 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 96.09 | |
| 3fbt_A | 282 | Chorismate mutase and shikimate 5-dehydrogenase fu | 96.08 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 96.08 | |
| 1a4i_A | 301 | Methylenetetrahydrofolate dehydrogenase / methenyl | 96.05 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 96.05 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 96.05 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 96.04 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 96.04 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 96.04 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 96.04 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 96.03 | |
| 1npy_A | 271 | Hypothetical shikimate 5-dehydrogenase-like protei | 96.03 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 96.02 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 96.02 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 96.02 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 96.02 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 96.02 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 96.02 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 96.02 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 96.01 | |
| 1dl5_A | 317 | Protein-L-isoaspartate O-methyltransferase; isoasp | 96.01 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 96.0 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 96.0 | |
| 2g76_A | 335 | 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor | 95.98 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 95.98 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 95.98 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 95.97 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 95.97 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 95.96 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 95.93 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 95.93 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 95.93 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 95.92 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 95.9 | |
| 3ngx_A | 276 | Bifunctional protein fold; methylenetetrahydrofola | 95.9 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 95.89 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 95.89 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 95.89 | |
| 2j6i_A | 364 | Formate dehydrogenase; oxidoreductase, D-specific- | 95.88 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 95.88 | |
| 2nxc_A | 254 | L11 mtase, ribosomal protein L11 methyltransferase | 95.87 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 95.87 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 95.86 | |
| 3ou2_A | 218 | SAM-dependent methyltransferase; O-methyltransfera | 95.85 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 95.84 | |
| 4df3_A | 233 | Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; | 95.83 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 95.82 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 95.81 | |
| 3cbg_A | 232 | O-methyltransferase; cyanobacterium; HET: SAH FER | 95.81 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 95.8 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 95.8 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 95.8 | |
| 3jtm_A | 351 | Formate dehydrogenase, mitochondrial; mitochondrio | 95.79 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 95.77 | |
| 1b0a_A | 288 | Protein (fold bifunctional protein); folate, dehyd | 95.77 | |
| 4a5o_A | 286 | Bifunctional protein fold; oxidoreductase, hydrola | 95.77 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 95.76 | |
| 3ggo_A | 314 | Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b | 95.76 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 95.75 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 95.74 | |
| 1r18_A | 227 | Protein-L-isoaspartate(D-aspartate)-O-methyltrans; | 95.74 | |
| 3vc1_A | 312 | Geranyl diphosphate 2-C-methyltransferase; rossman | 95.72 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 95.72 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 95.71 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 95.71 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 95.71 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 95.71 | |
| 1ej0_A | 180 | FTSJ; methyltransferase, adoMet, adenosyl methioni | 95.7 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 95.7 | |
| 3gg9_A | 352 | D-3-phosphoglycerate dehydrogenase oxidoreductase; | 95.69 | |
| 3mti_A | 185 | RRNA methylase; SAM-dependent, PSI, MCSG, structur | 95.69 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 95.68 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 95.68 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 95.65 | |
| 3uwp_A | 438 | Histone-lysine N-methyltransferase, H3 lysine-79; | 95.65 | |
| 4e5n_A | 330 | Thermostable phosphite dehydrogenase; D-2-hydroxya | 95.65 | |
| 1yb2_A | 275 | Hypothetical protein TA0852; structural genomics, | 95.65 | |
| 1nkv_A | 256 | Hypothetical protein YJHP; structural genomics, PS | 95.63 | |
| 1mjf_A | 281 | Spermidine synthase; spermidine synthetase, struct | 95.63 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 95.61 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 95.59 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 95.59 | |
| 1gdh_A | 320 | D-glycerate dehydrogenase; oxidoreductase(CHOH (D) | 95.58 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 95.57 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 95.55 | |
| 3cea_A | 346 | MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore | 95.54 | |
| 2f1k_A | 279 | Prephenate dehydrogenase; tyrosine synthesis, X-RA | 95.54 | |
| 2nac_A | 393 | NAD-dependent formate dehydrogenase; oxidoreductas | 95.54 | |
| 1sui_A | 247 | Caffeoyl-COA O-methyltransferase; rossmann fold, p | 95.53 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 95.53 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 95.52 | |
| 1l3i_A | 192 | Precorrin-6Y methyltransferase/putative decarboxyl | 95.51 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 95.51 | |
| 2gcg_A | 330 | Glyoxylate reductase/hydroxypyruvate reductase; NA | 95.51 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 95.49 | |
| 1i1n_A | 226 | Protein-L-isoaspartate O-methyltransferase; S-aden | 95.48 | |
| 2uyy_A | 316 | N-PAC protein; long-chain dehydrogenase, cytokine; | 95.48 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 95.48 | |
| 2w2k_A | 348 | D-mandelate dehydrogenase; 2-hydroxyacid dehydroge | 95.47 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 95.46 | |
| 2g5c_A | 281 | Prephenate dehydrogenase; TYRA, oxidoreductase; HE | 95.45 | |
| 1xj5_A | 334 | Spermidine synthase 1; structural genomics, protei | 95.45 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 95.43 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 95.39 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 95.39 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 95.39 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 95.38 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 95.38 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 95.37 | |
| 1vbf_A | 231 | 231AA long hypothetical protein-L-isoaspartate O- | 95.37 | |
| 3dli_A | 240 | Methyltransferase; PSI-II, NYSGXRC, structural gen | 95.37 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 95.34 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 95.34 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 95.34 | |
| 3bwc_A | 304 | Spermidine synthase; SAM, SGPP, structura genomics | 95.32 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 95.31 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 95.3 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 95.3 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 95.29 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 95.29 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 95.27 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 95.27 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 95.25 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 95.24 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 95.24 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 95.23 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 95.23 | |
| 3cky_A | 301 | 2-hydroxymethyl glutarate dehydrogenase; rossmann | 95.23 | |
| 2a9f_A | 398 | Putative malic enzyme ((S)-malate:NAD+ oxidoreduct | 95.23 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 95.22 | |
| 3c3y_A | 237 | Pfomt, O-methyltransferase; plant secondary metabo | 95.21 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 95.21 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 95.21 | |
| 2c2x_A | 281 | Methylenetetrahydrofolate dehydrogenase- methenylt | 95.2 | |
| 3evz_A | 230 | Methyltransferase; NYSGXRC, NEW YORK SGX research | 95.18 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 95.18 | |
| 2b2c_A | 314 | Spermidine synthase; beta-alpha, transferase; 2.50 | 95.16 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 95.11 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 95.11 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 95.11 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 95.1 | |
| 4hy3_A | 365 | Phosphoglycerate oxidoreductase; PSI-biology, stru | 95.09 | |
| 3tr6_A | 225 | O-methyltransferase; cellular processes; HET: SAH; | 95.08 | |
| 3m33_A | 226 | Uncharacterized protein; structural genomics, PSI- | 95.07 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 95.06 | |
| 1pjz_A | 203 | Thiopurine S-methyltransferase; polymorphism, S-ad | 95.03 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 95.02 | |
| 2glx_A | 332 | 1,5-anhydro-D-fructose reductase; NADP(H) dependen | 95.01 | |
| 3e18_A | 359 | Oxidoreductase; dehydrogenase, NAD-binding, struct | 95.01 | |
| 1g8a_A | 227 | Fibrillarin-like PRE-rRNA processing protein; rRNA | 94.98 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 94.97 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 94.94 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 94.94 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 94.91 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 94.9 | |
| 3duw_A | 223 | OMT, O-methyltransferase, putative; alternating of | 94.89 | |
| 4had_A | 350 | Probable oxidoreductase protein; structural genomi | 94.88 | |
| 3adn_A | 294 | Spermidine synthase; aminopropyltransferase, polya | 94.87 | |
| 3g07_A | 292 | 7SK snRNA methylphosphate capping enzyme; structur | 94.87 | |
| 3bus_A | 273 | REBM, methyltransferase; rebeccamycin synthesis; H | 94.87 | |
| 1inl_A | 296 | Spermidine synthase; beta-barrel, rossman fold, st | 94.86 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 94.85 | |
| 2pxx_A | 215 | Uncharacterized protein MGC2408; structural genomi | 94.84 | |
| 1iy9_A | 275 | Spermidine synthase; rossmann fold, structural gen | 94.84 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 94.83 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 94.82 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 94.82 | |
| 3iv6_A | 261 | Putative Zn-dependent alcohol dehydrogenase; alpha | 94.8 | |
| 2o07_A | 304 | Spermidine synthase; structural genomics, structur | 94.8 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 94.79 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 94.78 | |
| 2d0i_A | 333 | Dehydrogenase; structural genomics, NPPSFA, nation | 94.75 | |
| 1mx3_A | 347 | CTBP1, C-terminal binding protein 1; nuclear prote | 94.73 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 94.7 | |
| 2gb4_A | 252 | Thiopurine S-methyltransferase; 18204406, thiopuri | 94.7 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 94.7 | |
| 4gek_A | 261 | TRNA (CMO5U34)-methyltransferase; structural genom | 94.7 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 94.68 | |
| 4g2n_A | 345 | D-isomer specific 2-hydroxyacid dehydrogenase, Na; | 94.65 | |
| 3ktd_A | 341 | Prephenate dehydrogenase; structural genomics, joi | 94.63 | |
| 1j4a_A | 333 | D-LDH, D-lactate dehydrogenase; NAD-dependent dehy | 94.62 | |
| 2i7c_A | 283 | Spermidine synthase; transferase, structural genom | 94.61 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 94.58 | |
| 2gf2_A | 296 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct | 94.57 | |
| 2o57_A | 297 | Putative sarcosine dimethylglycine methyltransfera | 94.57 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 94.56 | |
| 1vl5_A | 260 | Unknown conserved protein BH2331; putative methylt | 94.55 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 94.54 | |
| 2p35_A | 259 | Trans-aconitate 2-methyltransferase; SAM dependent | 94.53 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 94.52 | |
| 3qsg_A | 312 | NAD-binding phosphogluconate dehydrogenase-like P; | 94.51 | |
| 3q2i_A | 354 | Dehydrogenase; rossmann fold, UDP-sugar binding, N | 94.51 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 94.5 | |
| 2cvz_A | 289 | Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; | 94.48 | |
| 3i9f_A | 170 | Putative type 11 methyltransferase; structural gen | 94.43 | |
| 2kw5_A | 202 | SLR1183 protein; structural genomics, northeast st | 94.41 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 94.38 | |
| 3gvx_A | 290 | Glycerate dehydrogenase related protein; NYSGXRC, | 94.36 | |
| 4fb5_A | 393 | Probable oxidoreductase protein; PSI-biology, nysg | 94.34 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 94.33 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 94.31 |
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-65 Score=481.81 Aligned_cols=371 Identities=90% Similarity=1.478 Sum_probs=337.3
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
||||+++.+++++++++++|.|+|.++||+|||++++||++|++.+.|..+..++|.++|||++|+|+++|+++++|++|
T Consensus 8 tmkA~v~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~vG 87 (378)
T 3uko_A 8 TCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQAG 87 (378)
T ss_dssp EEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEECTTCCSCCTT
T ss_pred eeEEEEEecCCCccEEEEecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCCCCCCCccCCccceEEEEEeCCCCCcCCCC
Confidence 59999999999999999999999999999999999999999999999987777899999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|||++.+..+|+.|.+|+.++++.|.+.......|+...+|...+..+|...++.++.|+|+||+.++++.++++|++++
T Consensus 88 drV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~ 167 (378)
T 3uko_A 88 DHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAP 167 (378)
T ss_dssp CEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTSC
T ss_pred CEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEechhheEECCCCCC
Confidence 99999999999999999999999999876544455555677777777888888889999999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
+++||.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+++|+++|++++++++|+++++++|+++++++.+
T Consensus 168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~ 247 (378)
T 3uko_A 168 LDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKD 247 (378)
T ss_dssp HHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGG
T ss_pred HHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEcccc
Confidence 99999999999999999989999999999999999999999999999999988999999999999999999999999874
Q ss_pred CCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCCccc
Q 017431 241 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSR 320 (371)
Q Consensus 241 ~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 320 (371)
.+.++.+.+++.+++++|++|||+|++.+++.+++++++++|+++.+|....+..+++++..+.+++++.|+.++.+...
T Consensus 248 ~~~~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 327 (378)
T 3uko_A 248 HDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSR 327 (378)
T ss_dssp CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCCHH
T ss_pred CchhHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHHHHhcCcEEEEEEecCCCch
Confidence 33778899999998899999999999888999999999922999999986555566676666666889999887666556
Q ss_pred CcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEecCC
Q 017431 321 SQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKMQD 371 (371)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~~d 371 (371)
+++++++++++++++++.++++++|+|+++++|++.+.+++..|+||++++
T Consensus 328 ~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~~Kvvi~~~~ 378 (378)
T 3uko_A 328 TQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCLRCVLDTSK 378 (378)
T ss_dssp HHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTCSEEEEETTC
T ss_pred HHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCceEEEEecCC
Confidence 789999999999999998999999999999999999999887899999875
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-60 Score=449.84 Aligned_cols=363 Identities=51% Similarity=0.894 Sum_probs=309.1
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
+|||+++.+++++++++++|.|+|.++||+|||++++||++|++.+.|.++ ..+|.++|||++|+|+++|++|++|++|
T Consensus 9 ~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~v~~~~vG 87 (373)
T 1p0f_A 9 TCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP-SKFPVILGHEAVGVVESIGAGVTCVKPG 87 (373)
T ss_dssp EEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCCEEEEEEEECTTCCSCCTT
T ss_pred eeEEEEEEcCCCCeeEEEeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC-CCCCcccCcCceEEEEEECCCCCccCCC
Confidence 599999999987899999999999999999999999999999999998765 4689999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|||++.+..+|+.|.+|+.++++.|.+.....+.|.. .+|..+...+|...+++...|+|+||+++|++.++++|++++
T Consensus 88 drV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~ 166 (373)
T 1p0f_A 88 DKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLM-ADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAP 166 (373)
T ss_dssp CEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSC-TTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEECTTCC
T ss_pred CEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccc-cCCccccccCCcccccccCCccceeEEEEchhhEEECCCCCC
Confidence 9999999999999999999999999876432111221 222111112233334444557999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
++ ||++++++.|||+++.+..++++|++|||+|+|++|++++|+|+++|+++|++++++++++++++++|+++++++.+
T Consensus 167 ~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~ 245 (373)
T 1p0f_A 167 LE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKD 245 (373)
T ss_dssp GG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGG
T ss_pred hh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEeccc
Confidence 99 99999999999999888899999999999999999999999999999978999999999999999999999998764
Q ss_pred CCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCC-ceEEEEccCCCCCcccccchheee-ceEEEeeecCCCc
Q 017431 241 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGW-GTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFK 318 (371)
Q Consensus 241 ~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~-G~iv~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~ 318 (371)
.+.++.+.+++.+++++|++||++|.+..++.+++++++ + |+++.+|.......+++++..+.. + ++.|+.++.+.
T Consensus 246 ~~~~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~~~~~ 323 (373)
T 1p0f_A 246 YDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYC-GSGVTVVLGLASPNERLPLDPLLLLTGR-SLKGSVFGGFK 323 (373)
T ss_dssp CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECCCCCTTCCEEECTHHHHTTC-EEEECSGGGCC
T ss_pred ccchHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhc-CCCEEEEEccCCCCCccccCHHHhccCc-eEEeeccCCcC
Confidence 224688888888877999999999998889999999999 7 999999975433345555555444 5 88887654332
Q ss_pred ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEec
Q 017431 319 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 369 (371)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~ 369 (371)
.+++++++++++++++++.++++++|+|+++++|++.+++++..|++|++
T Consensus 324 -~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvi~~ 373 (373)
T 1p0f_A 324 -GEEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQGVRSIMIY 373 (373)
T ss_dssp -GGGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSSCSEEEEEC
T ss_pred -HHHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCCcceEEEeC
Confidence 26899999999999998888889999999999999999888777999875
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-60 Score=449.42 Aligned_cols=365 Identities=53% Similarity=0.926 Sum_probs=310.2
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
+|||+++.+++++++++++|.|+|.++||+|||++++||++|++.+.|..+.. +|.++|||++|+|+++|++|++|++|
T Consensus 8 ~mkA~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~P~v~GhE~~G~V~~vG~~v~~~~vG 86 (374)
T 2jhf_A 8 KCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP-LPVIAGHEAAGIVESIGEGVTTVRPG 86 (374)
T ss_dssp EEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCCC-SSBCCCCSEEEEEEEECTTCCSCCTT
T ss_pred eEEEEEEecCCCceEEEEccCCCCCCCeEEEEEeEEeechhhHHHHcCCCCCC-CCcccCcCceEEEEEECCCCCCCCCC
Confidence 49999999999789999999999999999999999999999999999876543 89999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|||++.+..+|+.|.+|+.++++.|.+.......|+. .+|..+....|...+++...|+|+||+++|++.++++|++++
T Consensus 87 drV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~ 165 (374)
T 2jhf_A 87 DKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASP 165 (374)
T ss_dssp CEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSC-TTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECCTTCC
T ss_pred CEEEECCCCCCCCCccccCCCcCcCCCCccccccccc-cCCcccccccccccccccCCccCeeEEEEchHHeEECCCCCC
Confidence 9999999999999999999999999876432111221 122111112233334444457999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
+++||++++++.|||+++.+..++++|++|||+|+|++|++++|+|+++|+++|+++++++++.++++++|+++++++.+
T Consensus 166 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~ 245 (374)
T 2jhf_A 166 LEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQD 245 (374)
T ss_dssp HHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGG
T ss_pred HHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccc
Confidence 99999999999999999888899999999999999999999999999999978999999999999999999999998764
Q ss_pred CCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCC-ceEEEEccCCCCCcccccchheee-ceEEEeeecCCCc
Q 017431 241 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGW-GTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFK 318 (371)
Q Consensus 241 ~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~-G~iv~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~ 318 (371)
...++.+.+++.+++++|++||++|.+..++.+++++++ + |+++.+|.......+++++..+.. + ++.|+.++.+.
T Consensus 246 ~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~~~~~ 323 (374)
T 2jhf_A 246 YKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQE-AYGVSVIVGVPPDSQNLSMNPMLLLSGR-TWKGAIFGGFK 323 (374)
T ss_dssp CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCT-TTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECSGGGCC
T ss_pred cchhHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhc-CCcEEEEeccCCCCCccccCHHHHhcCC-eEEEeccCCCC
Confidence 224577888888877999999999998889999999999 7 999999975433345555555443 5 88888665443
Q ss_pred ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEec
Q 017431 319 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 369 (371)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~ 369 (371)
..+++++++++++++++++.++++++|+|+++++|++.+.+++..|++|++
T Consensus 324 ~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~Kvvi~~ 374 (374)
T 2jhf_A 324 SKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTILTF 374 (374)
T ss_dssp HHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred hHHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCcceEEEeC
Confidence 346799999999999999888899999999999999999988777999875
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-61 Score=452.44 Aligned_cols=366 Identities=69% Similarity=1.139 Sum_probs=311.2
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
||||+++.+++++++++++|.|+|.++||+|||++++||++|++.+.|.++...+|.++|||++|+|+++|++|++|++|
T Consensus 6 ~mkA~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~~vG 85 (373)
T 2fzw_A 6 KCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKLKAG 85 (373)
T ss_dssp EEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCSCCTT
T ss_pred ceEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCCCCCCCccccccccEEEEEECCCCCCCCCC
Confidence 59999999999789999999999999999999999999999999999977655789999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|||++.+..+|+.|.+|+.++++.|.+.....+.|.. .+|..+....|...+++.+.|+|+||+++|++.++++|++++
T Consensus 86 drV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~ 164 (373)
T 2fzw_A 86 DTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAP 164 (373)
T ss_dssp CEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCC-TTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTSC
T ss_pred CEEEECCCCCCCCChHHcCcCcccCCCcccccccccc-cCCcccccccccccccccCCccceeEEEEchhheEECCCCCC
Confidence 9999999999999999999999999864311001211 122222222233344444557999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
+++||++++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+++|++++++++++++++++|+++++++.+
T Consensus 165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~ 244 (373)
T 2fzw_A 165 LDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQD 244 (373)
T ss_dssp HHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGG
T ss_pred HHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecccc
Confidence 99999999999999999888899999999999999999999999999999978999999999999999999999998764
Q ss_pred CCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCC-ceEEEEccCCCCCcccccchheee-ceEEEeeecCCCc
Q 017431 241 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGW-GTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFK 318 (371)
Q Consensus 241 ~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~-G~iv~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~ 318 (371)
...++.+.+++.+++++|++||++|.+..++.+++++++ + |+++.+|.......+++++..+.. + ++.|+.++.+.
T Consensus 245 ~~~~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~~~~~ 322 (373)
T 2fzw_A 245 FSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHK-GWGVSVVVGVAASGEEIATRPFQLVTGR-TWKGTAFGGWK 322 (373)
T ss_dssp CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECSGGGCC
T ss_pred ccccHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhcc-CCcEEEEEecCCCCceeeeCHHHHhcCC-EEEEeccCCCC
Confidence 224678888888877999999999998889999999999 7 999999975433345555555444 5 88887665443
Q ss_pred ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEec
Q 017431 319 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 369 (371)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~ 369 (371)
..+++++++++++++++++.++++++|+|+++++|++.+.+++..|++|++
T Consensus 323 ~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvi~~ 373 (373)
T 2fzw_A 323 SVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI 373 (373)
T ss_dssp HHHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred cHHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCcceEEEeC
Confidence 446799999999999999888899999999999999999888777999875
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-60 Score=449.86 Aligned_cols=363 Identities=48% Similarity=0.887 Sum_probs=307.9
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
+|||+++.+++++++++++|.|+|.++||+|||++++||++|++.+.|. +...+|.++|||++|+|+++|++|++|++|
T Consensus 8 ~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~~~~~P~v~GhE~~G~V~~vG~~v~~~~vG 86 (376)
T 1e3i_A 8 KCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-KKALFPVVLGHECAGIVESVGPGVTNFKPG 86 (376)
T ss_dssp EEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTT-SCCCSSBCCCCEEEEEEEEECTTCCSCCTT
T ss_pred heeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC-CCCCCCcccCccccEEEEEECCCCccCCCC
Confidence 5999999999878999999999999999999999999999999999887 444689999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccC----CCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRG----ATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 156 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP 156 (371)
|||++.+..+|+.|.+|+.++++.|.+... ..+.|.. .+|..+...+|...+++...|+|+||+++|++.++++|
T Consensus 87 drV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP 165 (376)
T 1e3i_A 87 DKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELM-EDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVD 165 (376)
T ss_dssp CEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSC-TTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECC
T ss_pred CEEEECCcCCCCCCccccCCCcccCcCcCcccccccccccc-ccCccccccCCcccccccCCccceeEEEeccccEEECC
Confidence 999999999999999999999999986530 0001211 12211222223333334445799999999999999999
Q ss_pred CCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEe
Q 017431 157 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 236 (371)
Q Consensus 157 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi 236 (371)
+++++++||++++++.|||+++.+..++++|++|||+|+|++|++++|+|+++|+++|++++++++++++++++|+++++
T Consensus 166 ~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi 245 (376)
T 1e3i_A 166 DEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCL 245 (376)
T ss_dssp TTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEE
T ss_pred CCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEE
Confidence 99999999999999999999988889999999999999999999999999999997899999999999999999999999
Q ss_pred cCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCC-ceEEEEccCCCCCcccccchheee-ceEEEeeec
Q 017431 237 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGW-GTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAF 314 (371)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~-G~iv~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~ 314 (371)
++.+.+.++.+.+++.+++++|++||++|.+..++.+++++++ + |+++.+|.. ...+++++..+.. + ++.|+.+
T Consensus 246 ~~~~~~~~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~-~~G~iv~~G~~--~~~~~~~~~~~~~~~-~i~g~~~ 321 (376)
T 1e3i_A 246 NPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVL-GWGSCTVVGAK--VDEMTIPTVDVILGR-SINGTFF 321 (376)
T ss_dssp CGGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCT-TTCEEEECCCS--SSEEEEEHHHHHTTC-EEEECSG
T ss_pred ccccccchHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhc-CCCEEEEECCC--CCccccCHHHhhccC-eEEEEec
Confidence 8764224678888888877999999999998889999999999 7 999999873 2345555555443 5 8888765
Q ss_pred CCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEec
Q 017431 315 GGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 369 (371)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~ 369 (371)
+.+...+++++++++++++++++.++++++|+|+++++|++.+.+++..|+||++
T Consensus 322 ~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~Kvvi~~ 376 (376)
T 1e3i_A 322 GGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGKSIRTILTF 376 (376)
T ss_dssp GGCCHHHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred CCCCcHHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCCcceEEEeC
Confidence 5443446799999999999998888899999999999999999988867999975
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-60 Score=448.43 Aligned_cols=364 Identities=57% Similarity=1.028 Sum_probs=309.4
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccc-cccCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAY-TWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 79 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~-~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~ 79 (371)
+|||+++.+++++++++++|.|+|.++||+|||++++||++|++ .+.|..+ ..+|.++|||++|+|+++|++|++|++
T Consensus 8 ~mka~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~V~~~~v 86 (374)
T 1cdo_A 8 KCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK-DGFPVVLGHEGAGIVESVGPGVTEFQP 86 (374)
T ss_dssp EEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT-TSCSEECCCCEEEEEEEECTTCCSCCT
T ss_pred eeEEEEEecCCCCeEEEEeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC-CCCCcccCccceEEEEEECCCCccCCC
Confidence 59999999998889999999999999999999999999999999 8888765 568999999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCC
Q 017431 80 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 159 (371)
Q Consensus 80 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~ 159 (371)
||||++.+..+|+.|.+|+.++++.|.+.....+.|+. .+|..+...+|...+++...|+|+||+++|++.++++|+++
T Consensus 87 GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~~ 165 (374)
T 1cdo_A 87 GEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVM-SPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSA 165 (374)
T ss_dssp TCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTT-SCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECCTTC
T ss_pred CCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccc-cCCccccccCCcccccccCCccceeEEEEchhheEECCCCC
Confidence 99999999999999999999999999865421111221 12222222223333444445799999999999999999999
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCC
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 239 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~ 239 (371)
++++||++++++.|||+++.+..++++|++|||+|+|++|++++|+|+++|+++|+++++++++.++++++|+++++++.
T Consensus 166 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~ 245 (374)
T 1cdo_A 166 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPN 245 (374)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGG
T ss_pred CHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEecc
Confidence 99999999999999999988889999999999999999999999999999997899999999999999999999999876
Q ss_pred CCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCC-ceEEEEccCCCCCcccccchheee-ceEEEeeecCCC
Q 017431 240 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGW-GTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGF 317 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~-G~iv~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~ 317 (371)
+.+.++.+.+++.+++++|++||++|.+..++.+++++++ + |+++.+|.... ..+++++..+.. + ++.|+.+..+
T Consensus 246 ~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~-~~~~~~~~~~~~~~-~i~g~~~~~~ 322 (374)
T 1cdo_A 246 DHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLK-GWGVSVLVGWTDL-HDVATRPIQLIAGR-TWKGSMFGGF 322 (374)
T ss_dssp GCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECSCCSS-SCEEECHHHHHTTC-EEEECSGGGC
T ss_pred ccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhc-CCcEEEEEcCCCC-CCcccCHHHHhcCC-eEEEEecCCC
Confidence 4224678888888877999999999997889999999999 7 99999987543 334555544443 5 8888766544
Q ss_pred cccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEec
Q 017431 318 KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 369 (371)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~ 369 (371)
...+++++++++++++++++.++++++|+|+|+++|++.+++++..|+||+|
T Consensus 323 ~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvi~~ 374 (374)
T 1cdo_A 323 KGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL 374 (374)
T ss_dssp CHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred CcHHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCeeEEEEeC
Confidence 3446799999999999999888899999999999999999988877999975
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-59 Score=442.16 Aligned_cols=363 Identities=29% Similarity=0.522 Sum_probs=304.2
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
||||+++.+++++++++++|.|+|.++||+|||++++||++|++.+.|.++ ..+|.++|||++|+|+++|++|++|++|
T Consensus 6 ~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~v~~~~~G 84 (371)
T 1f8f_A 6 DIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP-VPLPAVLGHEGSGIIEAIGPNVTELQVG 84 (371)
T ss_dssp EEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCEEEEEEEEECTTCCSCCTT
T ss_pred cceEEEEcCCCCCeEEEEecCCCCCCCEEEEEEEEeecCchhHHHHcCCCC-CCCCcccCcccceEEEEeCCCCCCCCCC
Confidence 489999999987799999999999999999999999999999999999765 3579999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccc-cCCcce-eeccCCcceeeeEEecccceEecCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFS-INGKPI-YHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~-~~~~~~-~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
|||++.+ .+|+.|.+|+.++++.|.+.......|.. .+|...+. .+|... .+....|+|+||++++++.++++|++
T Consensus 85 drV~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~-~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~~iP~~ 162 (371)
T 1f8f_A 85 DHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGAD-SEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKD 162 (371)
T ss_dssp CEEEECC-CCCSSSHHHHTTCGGGCTTHHHHSSSSSC-SSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECTT
T ss_pred CEEEecC-CCCCCChhhhCcCcccccccccccccccc-ccccccccccCCccccccccCCccccCeEEechhheEECCCC
Confidence 9999999 99999999999999999865411000100 11100000 001000 11223469999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
+++++||.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++|+++++++
T Consensus 163 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~ 242 (371)
T 1f8f_A 163 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINS 242 (371)
T ss_dssp SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEET
T ss_pred CCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecC
Confidence 99999999999999999999888999999999999999999999999999999779999999999999999999999998
Q ss_pred CCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecCCC
Q 017431 239 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGF 317 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~ 317 (371)
.+ .++.+.+++.+++++|++||++|.+..++.++++++++ |+++.+|........+++...+. +++++.++....+
T Consensus 243 ~~--~~~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 319 (371)
T 1f8f_A 243 KT--QDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSG 319 (371)
T ss_dssp TT--SCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEE-EEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGGS
T ss_pred Cc--cCHHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcC-CEEEEeCCCCCCCccccCHHHHHhCCCEEEEeCCCCC
Confidence 76 67888888888779999999999988899999999996 99999998643333455544443 4889998876543
Q ss_pred cccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEecC
Q 017431 318 KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKMQ 370 (371)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~~ 370 (371)
...+++++++++++++++++.+++++ |+|+|+++|++.+++++..|+||++.
T Consensus 320 ~~~~~~~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~~~~~~~~~Kvvv~~~ 371 (371)
T 1f8f_A 320 SPKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGITLKPIIKIA 371 (371)
T ss_dssp CHHHHHHHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHHHHHHTSCSEEEEECC
T ss_pred chHHHHHHHHHHHHcCCCCcccceeE-ecHHHHHHHHHHHHCCCceEEEEeeC
Confidence 33467899999999999988778888 99999999999998887779999874
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-59 Score=438.23 Aligned_cols=338 Identities=25% Similarity=0.409 Sum_probs=300.0
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
||||+++.+++. ++++++|.|+|.++||+|||++++||++|++.+.|.++ ..+|.++|||++|+|+++|+++++|++|
T Consensus 23 ~mkA~v~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~vG 100 (370)
T 4ej6_A 23 MMKAVRLESVGN-ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFP-STPPVTLGHEFCGIVVEAGSAVRDIAPG 100 (370)
T ss_dssp EEEEEEEEETTE-EEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSEECCCSEEEEEEEECTTCCSSCTT
T ss_pred heEEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEEeecHHHHHHHcCCCC-CCCCeecCcceEEEEEEECCCCCCCCCC
Confidence 599999999976 99999999999999999999999999999999999863 4689999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|||++.+..+|+.|.+|+.+.++.|.+... +|.. .+ |+|+||++++++.++++|++++
T Consensus 101 drV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~~P~~~~ 158 (370)
T 4ej6_A 101 ARITGDPNISCGRCPQCQAGRVNLCRNLRA---IGIH-RD------------------GGFAEYVLVPRKQAFEIPLTLD 158 (370)
T ss_dssp CEEEECCEECCSSSHHHHTTCGGGCTTCEE---BTTT-BC------------------CSSBSEEEEEGGGEEEECTTSC
T ss_pred CEEEECCCCCCCCChHHhCcCcccCCCccc---cCCC-CC------------------CcceEEEEEchhhEEECCCCCC
Confidence 999999999999999999999999987653 3332 33 4999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
+++|| ++.++.|||+++ +..++++|++|||+|+|++|++++|+|+++|+++|+++++++++.++++++|+++++++.+
T Consensus 159 ~~~aa-l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~ 236 (370)
T 4ej6_A 159 PVHGA-FCEPLACCLHGV-DLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSA 236 (370)
T ss_dssp TTGGG-GHHHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTS
T ss_pred HHHHh-hhhHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCC
Confidence 99998 666899999987 8889999999999999999999999999999988999999999999999999999999887
Q ss_pred CCchHHHHHHh---hcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheee-ceEEEeeecCC
Q 017431 241 HDKPIQQVLVD---LTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGG 316 (371)
Q Consensus 241 ~~~~~~~~~~~---~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~ 316 (371)
.++.+.+++ .+++++|++|||+|.+.+++.++++++++ |+++.+|........+++...+.. ++++.|+....
T Consensus 237 --~~~~~~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~-G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 313 (370)
T 4ej6_A 237 --GDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAG-GTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINP 313 (370)
T ss_dssp --SCHHHHHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECSCCCTTCCCCCCHHHHHHTTCEEEECCSCT
T ss_pred --cCHHHHHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEeccCCCCccccCHHHHHhCCcEEEEeccCh
Confidence 678888888 77779999999999888899999999996 999999986543455666665544 89999986543
Q ss_pred CcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCe--eEEEEecCC
Q 017431 317 FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDC--LRCVLKMQD 371 (371)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~--~kvvl~~~d 371 (371)
.++++++++++++++++.++++++|+|+++++|++.+.+++. .|+++++++
T Consensus 314 ----~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~kvv~~~~~ 366 (370)
T 4ej6_A 314 ----FVHRRAADLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKVLVIPSAER 366 (370)
T ss_dssp ----TCHHHHHHHHHTTCSCCGGGEEEEECGGGHHHHHHSCCCTTCSEEEECCC---
T ss_pred ----HHHHHHHHHHHcCCCChhHcEEEEEEHHHHHHHHHHHHcCCCCeEEEEEcccc
Confidence 469999999999999999999999999999999999988764 388887753
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-58 Score=430.17 Aligned_cols=342 Identities=24% Similarity=0.347 Sum_probs=299.4
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccc-cccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAY-TWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~-~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
|||+++.++++ ++++++|.|+|.++||+|||++++||++|++ ++.|..+. ++|.++|||++|+|+++|+++++|++|
T Consensus 1 MkA~~~~~~~~-~~~~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~-~~p~v~G~E~~G~V~~vG~~v~~~~vG 78 (352)
T 3fpc_A 1 MKGFAMLSIGK-VGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGE-RHNMILGHEAVGEVVEVGSEVKDFKPG 78 (352)
T ss_dssp CEEEEEEETTE-EEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTCC-CSSEECCCEEEEEEEEECTTCCSCCTT
T ss_pred CeEEEEccCCC-ceEEeCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCCCC-CCCcccCCcceEEEEEECCCCCcCCCC
Confidence 89999999998 9999999999999999999999999999999 56787654 579999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEeccc--ceEecCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ 158 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~v~~lP~~ 158 (371)
|||++.+..+|+.|.+|+.++.+.|.........|.. .+ |+|+||+.+++. .++++|++
T Consensus 79 drV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~-~~------------------G~~aey~~v~~~~~~~~~iP~~ 139 (352)
T 3fpc_A 79 DRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNV-KD------------------GVFGEFFHVNDADMNLAHLPKE 139 (352)
T ss_dssp CEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTT-BC------------------CSSBSCEEESSHHHHCEECCTT
T ss_pred CEEEEccccCCCCchhhcCCCcCCccccccccccccC-CC------------------CcccceEEeccccCeEEECCCC
Confidence 9999999999999999999999988755322112211 23 499999999976 99999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
+++++||.++.++.|||+++ +..++++|++|||+|+|++|++++|+|+++|+++|++++++++|+++++++|+++++++
T Consensus 140 ~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~ 218 (352)
T 3fpc_A 140 IPLEAAVMIPDMMTTGFHGA-ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINY 218 (352)
T ss_dssp SCHHHHTTTTTHHHHHHHHH-HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECG
T ss_pred CCHHHHhhccchhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcC
Confidence 99999999999999999997 88999999999999999999999999999999889999999999999999999999998
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe---eeceEEEeeec
Q 017431 239 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL---VTGRVWKGTAF 314 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~---~~~~~~~g~~~ 314 (371)
++ .++.+.+++.+++ ++|++||++|++.+++.++++++++ |+++.+|.......++++...+ .+++++.++..
T Consensus 219 ~~--~~~~~~v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~ 295 (352)
T 3fpc_A 219 KN--GDIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPG-SDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLC 295 (352)
T ss_dssp GG--SCHHHHHHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCC
T ss_pred CC--cCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEecccCCCCceecchhHhhhhccccEEEEeec
Confidence 77 7788999999998 9999999999987899999999996 9999999865444455444332 24677877654
Q ss_pred CCCcccCcHHHHHHHHHcCCCCCCCceeeeee-cccHHHHHHHHhCCCe--eEEEEecC
Q 017431 315 GGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMT-LGEINEAFRYMHGGDC--LRCVLKMQ 370 (371)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~A~~~~~~~~~--~kvvl~~~ 370 (371)
.. ..+++++++++++++++++.++++++|+ |+++++|++.+.+++. .|+||+++
T Consensus 296 ~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~~ 352 (352)
T 3fpc_A 296 PG--GRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVILA 352 (352)
T ss_dssp CC--HHHHHHHHHHHHHTTSCCGGGGEEEEEESTTHHHHHHHHHHSCCTTCSEEEEECC
T ss_pred cC--chhHHHHHHHHHHcCCCChhHhheeeCCCHHHHHHHHHHHHhCCCCcEEEEEEeC
Confidence 22 2457999999999999999888999999 9999999999988543 49999874
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-58 Score=427.31 Aligned_cols=335 Identities=28% Similarity=0.476 Sum_probs=297.5
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQP 79 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~~~ 79 (371)
||||+++.+++++++++++|.|+|.++||+|||++++||++|++.+.|.++. .++|.++|||++|+|+++|+++++|++
T Consensus 2 ~MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~~v 81 (340)
T 3s2e_A 2 MMKAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKE 81 (340)
T ss_dssp EEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECSSCCSCCT
T ss_pred ceEEEEEecCCCCCEEEEccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCCCCCCCcccCCcceEEEEEECCCCCcCCC
Confidence 6999999999988999999999999999999999999999999999998765 368999999999999999999999999
Q ss_pred CCEE-eecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 80 GDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 80 Gd~V-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
|||| +..+..+|+.|.+|+.++++.|.+... .|+. .+ |+|+||+.+|++.++++|++
T Consensus 82 GdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~iP~~ 139 (340)
T 3s2e_A 82 GDRVGVPWLYSACGYCEHCLQGWETLCEKQQN---TGYS-VN------------------GGYGEYVVADPNYVGLLPDK 139 (340)
T ss_dssp TCEEEEESEEECCSSSHHHHTTCGGGCTTCEE---BTTT-BC------------------CSSBSEEEECTTTSEECCTT
T ss_pred CCEEEecCCCCCCCCChHHhCcCcccCccccc---cCCC-CC------------------CcceeEEEechHHEEECCCC
Confidence 9999 556788999999999999999987653 2322 33 49999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
+++++||.+++++.|||+++ +..++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++.++++++|+++++++
T Consensus 140 ~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~i~~ 217 (340)
T 3s2e_A 140 VGFVEIAPILCAGVTVYKGL-KVTDTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAVNA 217 (340)
T ss_dssp SCHHHHGGGGTHHHHHHHHH-HTTTCCTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred CCHHHhhcccchhHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCEEEeC
Confidence 99999999999999999998 67799999999999999999999999999999 99999999999999999999999998
Q ss_pred CCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecCCC
Q 017431 239 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGF 317 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~ 317 (371)
.+ .++.+.+++ +.+++|++||+++++..++.++++++++ |+++.+|... ...+++...+. +++++.|+....
T Consensus 218 ~~--~~~~~~~~~-~~g~~d~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~~~~~i~g~~~~~- 290 (340)
T 3s2e_A 218 RD--TDPAAWLQK-EIGGAHGVLVTAVSPKAFSQAIGMVRRG-GTIALNGLPP--GDFGTPIFDVVLKGITIRGSIVGT- 290 (340)
T ss_dssp TT--SCHHHHHHH-HHSSEEEEEESSCCHHHHHHHHHHEEEE-EEEEECSCCS--SEEEEEHHHHHHTTCEEEECCSCC-
T ss_pred CC--cCHHHHHHH-hCCCCCEEEEeCCCHHHHHHHHHHhccC-CEEEEeCCCC--CCCCCCHHHHHhCCeEEEEEecCC-
Confidence 87 677888887 4458999999999988899999999996 9999998754 23444444433 488888876543
Q ss_pred cccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecCC
Q 017431 318 KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQD 371 (371)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~d 371 (371)
++++++++++++++++++. +++|+|+++++|++.+++++.. |+||+++|
T Consensus 291 --~~~~~~~~~l~~~g~l~~~---~~~~~l~~~~~A~~~~~~~~~~Gkvvv~~~~ 340 (340)
T 3s2e_A 291 --RSDLQESLDFAAHGDVKAT---VSTAKLDDVNDVFGRLREGKVEGRVVLDFSR 340 (340)
T ss_dssp --HHHHHHHHHHHHTTSCCCC---EEEECGGGHHHHHHHHHTTCCCSEEEEECCC
T ss_pred --HHHHHHHHHHHHhCCCCce---EEEEeHHHHHHHHHHHHcCCCceEEEEecCC
Confidence 4689999999999998753 5788999999999999998876 99999875
|
| >4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-57 Score=424.41 Aligned_cols=339 Identities=22% Similarity=0.312 Sum_probs=295.3
Q ss_pred cceEEeecCCCCeEEEEeeCCC-CCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAP-PQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~-~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
|||+++.++|. ++++|+|+|+ +++|||||||+++|||++|++.+.|..+. ++|.++|||++|+|+++|++|+++++|
T Consensus 1 MkAvv~~~~g~-l~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~~~-~~P~i~G~E~~G~V~~vG~~V~~~~~G 78 (346)
T 4a2c_A 1 MKSVVNDTDGI-VRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAH-YYPITLGHEFSGYIDAVGSGVDDLHPG 78 (346)
T ss_dssp CEEEEECSSSC-EEEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSCSS-SSSBCCCCEEEEEEEEECTTCCSCCTT
T ss_pred CCEEEEecCCC-EEEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCCCC-CCCccccEEEEEEEEEECCCcccccCC
Confidence 89999999987 9999999998 57999999999999999999999887654 589999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|||++.+...|+.|..|+.++++.|.+... .|.. .+| +|+||+++|++.++++|++++
T Consensus 79 drV~~~~~~~~g~c~~c~~g~~~~c~~~~~---~g~~-~~G------------------~~aey~~v~~~~~~~iP~~l~ 136 (346)
T 4a2c_A 79 DAVACVPLLPCFTCPECLKGFYSQCAKYDF---IGSR-RDG------------------GFAEYIVVKRKNVFALPTDMP 136 (346)
T ss_dssp CEEEECCEECCSCSHHHHTTCGGGCSSCEE---BTTT-BCC------------------SSBSEEEEEGGGEEECCTTSC
T ss_pred CeEEeeeccCCCCcccccCCccccCCCccc---ccCC-CCc------------------ccccccccchheEEECCCCCC
Confidence 999999999999999999999999987653 3332 344 999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
+++||+++ ++.++++ +....++++|++|||+|+|++|++++|+|+++|++.+++++++++|+++++++|+++++++.+
T Consensus 137 ~~~aa~l~-~~~~~~~-~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~ 214 (346)
T 4a2c_A 137 IEDGAFIE-PITVGLH-AFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSE 214 (346)
T ss_dssp GGGGGGHH-HHHHHHH-HHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTT
T ss_pred HHHHHhch-HHHHHHH-HHHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCC
Confidence 99999875 4444554 568889999999999999999999999999999978889999999999999999999999988
Q ss_pred CCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccc-cchhe-eeceEEEeeecCCC
Q 017431 241 HDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIST-RPFQL-VTGRVWKGTAFGGF 317 (371)
Q Consensus 241 ~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~-~~~~~-~~~~~~~g~~~~~~ 317 (371)
.++.+.++.++++ ++|+++|++|.+.+++.++++++++ |+++.+|....+..+.. +...+ .+++++.|+.....
T Consensus 215 --~~~~~~~~~~~~~~g~d~v~d~~G~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~ 291 (346)
T 4a2c_A 215 --MSAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPH-AQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYS 291 (346)
T ss_dssp --SCHHHHHHHHGGGCSSEEEEECSCSHHHHHHHHHHCCTT-CEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTCC
T ss_pred --CCHHHHHHhhcccCCcccccccccccchhhhhhheecCC-eEEEEEeccCCCccccccCHHHHhhceeEEEEEecccc
Confidence 6777888888887 9999999999988899999999996 99999998654332222 22222 34889999875432
Q ss_pred --cccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 318 --KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 318 --~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
...++++.++++++++++++.++++++|+|+++++|++.+++++.. |+||++
T Consensus 292 ~~~~~~~~~~~~~l~~~g~l~~~~lI~~~~~l~~~~~A~~~l~~~~~~GKvVl~P 346 (346)
T 4a2c_A 292 SPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP 346 (346)
T ss_dssp SSTTCHHHHHHHHHHHTTCSCCGGGEEEEECHHHHHHHHHHHTTSCCCSEEEECC
T ss_pred CcchHHHHHHHHHHHHcCCCCCCccEeEEEeHHHHHHHHHHHHcCCCceEEEEEC
Confidence 2345789999999999999999999999999999999999988876 999864
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-57 Score=422.69 Aligned_cols=338 Identities=25% Similarity=0.365 Sum_probs=283.8
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccC-CCC--CCCCCcccccceeEEEEEeCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSG-KDP--EGLFPCILGHEAAGIVESVGEGVTEV 77 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g-~~~--~~~~p~v~G~e~~G~V~~~G~~v~~~ 77 (371)
+|||+++.+++.+++++++|.|+|.++||+|||++++||++|++.+.| .++ ...+|.++|||++|+|+++|+++++|
T Consensus 4 ~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~ 83 (348)
T 2d8a_A 4 KMVAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVEGI 83 (348)
T ss_dssp EEEEEEECSSSSSCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEEEEEECTTCCSC
T ss_pred cceEEEEECCCCCEEEEECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEEEEEECCCCCcC
Confidence 489999999985599999999999999999999999999999999998 443 23679999999999999999999999
Q ss_pred CCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCC
Q 017431 78 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 157 (371)
Q Consensus 78 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~ 157 (371)
++||||++.+..+|+.|.+|+.++++.|.+... +|.. .+ |+|+||+++|++.++++|+
T Consensus 84 ~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~iP~ 141 (348)
T 2d8a_A 84 EVGDYVSVETHIVCGKCYACRRGQYHVCQNTKI---FGVD-TD------------------GVFAEYAVVPAQNIWKNPK 141 (348)
T ss_dssp CTTCEEEECCEECCSCCC------------CEE---TTTS-SC------------------CSSBSEEEEEGGGEEECCT
T ss_pred CCCCEEEEcCCCCCCCChhhhCcCcccCCCCCe---ecCC-CC------------------CcCcceEEeChHHeEECCC
Confidence 999999999999999999999999999986542 2321 23 4999999999999999999
Q ss_pred CCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 158 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
++++++||++. ++.|||+++ +..++ +|++|||+|+|++|++++|+|+.+|+.+|+++++++++.++++++|++++++
T Consensus 142 ~~~~~~aa~~~-~~~ta~~~l-~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~ 218 (348)
T 2d8a_A 142 SIPPEYATLQE-PLGNAVDTV-LAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVIN 218 (348)
T ss_dssp TSCHHHHTTHH-HHHHHHHHH-TTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEEC
T ss_pred CCCHHHHHhhh-HHHHHHHHH-HhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEC
Confidence 99999999886 788999998 77888 9999999999999999999999999978999999999999999999999999
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccc-hhe-eeceEEEeeec
Q 017431 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP-FQL-VTGRVWKGTAF 314 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~-~~~~~~~g~~~ 314 (371)
+.+ .++.+.+++.+++ ++|++||++|.+..++.++++++++ |+++.+|.... ...++. ..+ .+++++.|+..
T Consensus 219 ~~~--~~~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~--~~~~~~~~~~~~~~~~i~g~~~ 293 (348)
T 2d8a_A 219 PFE--EDVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPA-GRVSLLGLYPG--KVTIDFNNLIIFKALTIYGITG 293 (348)
T ss_dssp TTT--SCHHHHHHHHTTTSCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCSS--CCCCCHHHHTTTTTCEEEECCC
T ss_pred CCC--cCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCC--CcccCchHHHHhCCcEEEEecC
Confidence 876 6788889999888 9999999999988899999999996 99999987543 334444 333 34888888754
Q ss_pred CCCcccCcHHHHHHHHHcCCCCCCCceeeeee-cccHHHHHHHHhCCCeeEEEEecC
Q 017431 315 GGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMT-LGEINEAFRYMHGGDCLRCVLKMQ 370 (371)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~A~~~~~~~~~~kvvl~~~ 370 (371)
.. ..+++++++++++++++++.++++++|+ |+++++|++.++++...|+||+++
T Consensus 294 ~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~gKvvi~~~ 348 (348)
T 2d8a_A 294 RH--LWETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELMRAGKTGKVVFMLK 348 (348)
T ss_dssp CC--SHHHHHHHHHHHHHTCCCCTTTEEEEEESSTTHHHHHHHHHTTCCSEEEEEC-
T ss_pred CC--cHHHHHHHHHHHHcCCCChHHhheeeCCCHHHHHHHHHHHhCCCceEEEEeeC
Confidence 32 1467899999999999988889999999 999999999998754459999874
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-56 Score=419.71 Aligned_cols=337 Identities=26% Similarity=0.373 Sum_probs=293.7
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC--CCCCcccccceeEEEEEeCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE--GLFPCILGHEAAGIVESVGEGVTEVQP 79 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~--~~~p~v~G~e~~G~V~~~G~~v~~~~~ 79 (371)
|||+++.+++++++++++|.|+|.++||+|||++++||++|++.+.|.++. .++|.++|||++|+|+++|+++++|++
T Consensus 1 MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~v 80 (345)
T 3jv7_A 1 MKAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGV 80 (345)
T ss_dssp CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEEEEEEECTTCCSCCT
T ss_pred CeEEEEcCCCCceEEEEecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEEEEEEECCCCCCCCC
Confidence 899999999998999999999999999999999999999999999987643 368999999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCcccccccCC--CccceecCCCccccccCCcceeeccCCcceeeeEEec-ccceEecC
Q 017431 80 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGA--TGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVH-DVSVAKID 156 (371)
Q Consensus 80 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~-~~~v~~lP 156 (371)
||||++.+..+|+.|.+|+.+.++.|...... ...|.. .+ |+|+||++++ ++.++++|
T Consensus 81 GdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~-~~------------------G~~aey~~v~~~~~~~~~p 141 (345)
T 3jv7_A 81 GDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLG-SP------------------GSMAEYMIVDSARHLVPIG 141 (345)
T ss_dssp TCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTT-BC------------------CSSBSEEEESCGGGEEECT
T ss_pred CCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcC-CC------------------ceeeEEEEecchhceEeCC
Confidence 99999999999999999999999999422110 001111 22 4999999999 99999999
Q ss_pred CCCCcchhhhccccchhhhhhhhh-cCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE
Q 017431 157 PQAPLDKVCLLGCGVPTGLGAVWN-TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 235 (371)
Q Consensus 157 ~~~~~~~aa~~~~~~~ta~~~l~~-~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v 235 (371)
+ +++++||.++++++|||+++.+ ..++++|++|||+|+|++|++++|+|+++|..+|++++++++|.++++++|++++
T Consensus 142 ~-~~~~~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~ 220 (345)
T 3jv7_A 142 D-LDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAA 220 (345)
T ss_dssp T-CCHHHHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEE
T ss_pred C-CCHHHhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEE
Confidence 9 9999999999999999999877 4589999999999999999999999999954499999999999999999999999
Q ss_pred ecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeec
Q 017431 236 VNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAF 314 (371)
Q Consensus 236 i~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~ 314 (371)
+++.+ ++.+.+++.+++ ++|++|||+|++.+++.++++++++ |+++.+|.... ...+++...+.+++++.++..
T Consensus 221 i~~~~---~~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~i~g~~~ 295 (345)
T 3jv7_A 221 VKSGA---GAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVD-GHISVVGIHAG-AHAKVGFFMIPFGASVVTPYW 295 (345)
T ss_dssp EECST---THHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEE-EEEEECSCCTT-CCEEESTTTSCTTCEEECCCS
T ss_pred EcCCC---cHHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcC-CEEEEECCCCC-CCCCcCHHHHhCCCEEEEEec
Confidence 98754 678889999988 9999999999987899999999996 99999997643 234444433445888888765
Q ss_pred CCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 315 GGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
.. .+++++++++++++++++ ++++|+|+++++|++.+.+++.. |+||++
T Consensus 296 ~~---~~~~~~~~~l~~~g~l~~---~~~~~~l~~~~~A~~~~~~~~~~Gkvvv~p 345 (345)
T 3jv7_A 296 GT---RSELMEVVALARAGRLDI---HTETFTLDEGPAAYRRLREGSIRGRGVVVP 345 (345)
T ss_dssp CC---HHHHHHHHHHHHTTCCCC---CEEEECSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred CC---HHHHHHHHHHHHcCCCce---EEEEEcHHHHHHHHHHHHcCCCceeEEeCC
Confidence 43 368999999999999876 46899999999999999998876 999874
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-56 Score=421.86 Aligned_cols=339 Identities=24% Similarity=0.350 Sum_probs=291.5
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCC-CC--CCCCCcccccceeEEEEEeCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK-DP--EGLFPCILGHEAAGIVESVGEGVTEV 77 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~-~~--~~~~p~v~G~e~~G~V~~~G~~v~~~ 77 (371)
+|||+++.+++. ++++++|.|+|.++||+|||++++||++|++.+.|. .. ..++|.++|||++|+|+++|++|++|
T Consensus 7 ~mka~~~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V~~~ 85 (356)
T 1pl8_A 7 NNLSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHL 85 (356)
T ss_dssp CCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCSC
T ss_pred CceEEEEecCCc-EEEEEccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCCCCC
Confidence 599999999875 999999999999999999999999999999988743 22 12579999999999999999999999
Q ss_pred CCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCC
Q 017431 78 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 157 (371)
Q Consensus 78 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~ 157 (371)
++||||++.+..+|+.|.+|+.++++.|.+... .|....+ |+|+||+++|++.++++|+
T Consensus 86 ~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~~------------------G~~aey~~v~~~~~~~iP~ 144 (356)
T 1pl8_A 86 KPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFF---CATPPDD------------------GNLCRFYKHNAAFCYKLPD 144 (356)
T ss_dssp CTTCEEEECSEECSSCCHHHHTTCGGGCTTCEE---TTBTTBC------------------CSCBSEEEEEGGGEEECCT
T ss_pred CCCCEEEEeccCCCCCChHHHCcCcccCCCccc---cCcCCCC------------------CccccEEEeehHHEEECcC
Confidence 999999999999999999999999999986542 2321123 4999999999999999999
Q ss_pred CCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 158 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
++++++||.+ .++.|||+++ +..++++|++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++|++++++
T Consensus 145 ~l~~~~aa~~-~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~ 222 (356)
T 1pl8_A 145 NVTFEEGALI-EPLSVGIHAC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQ 222 (356)
T ss_dssp TSCHHHHHHH-HHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEE
T ss_pred CCCHHHHHhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEc
Confidence 9999999876 4788999988 7889999999999999999999999999999988999999999999999999999998
Q ss_pred CCCC-CchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecC
Q 017431 238 PKDH-DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFG 315 (371)
Q Consensus 238 ~~~~-~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~ 315 (371)
+.+. ..++.+.+++.+++++|++||++|.+..++.++++++++ |+++.+|... ...+++...+. +++++.|+...
T Consensus 223 ~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~~~~~i~g~~~~ 299 (356)
T 1pl8_A 223 ISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLGS--EMTTVPLLHAAIREVDIKGVFRY 299 (356)
T ss_dssp CSSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCC--SCCCCCHHHHHHTTCEEEECCSC
T ss_pred CcccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEEecCC--CCCccCHHHHHhcceEEEEeccc
Confidence 7621 156777787777668999999999987899999999996 9999998743 22344444333 47888887542
Q ss_pred CCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEecC
Q 017431 316 GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKMQ 370 (371)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~~ 370 (371)
.+++++++++++++++++.++++++|+|+++++|++.+.++...|+||+++
T Consensus 300 ----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~gKvvi~~~ 350 (356)
T 1pl8_A 300 ----CNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKGLGLKIMLKCD 350 (356)
T ss_dssp ----SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEECC
T ss_pred ----HHHHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHhCCCceEEEEeCC
Confidence 467999999999999988888999999999999999999883349999985
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-57 Score=422.82 Aligned_cols=337 Identities=25% Similarity=0.405 Sum_probs=295.4
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCC---CCCCCcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~---~~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
|||+++.+++++++++++|.|+|.++||+|||++++||++|++.+.|.++ ...+|.++|||++|+|+++|+++++|+
T Consensus 1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~ 80 (343)
T 2dq4_A 1 MRALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQ 80 (343)
T ss_dssp CEEEEECSSSSSCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTCCSSC
T ss_pred CeEEEEeCCCCcEEEEeccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCCCcCC
Confidence 89999999987799999999999999999999999999999999998754 346899999999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||||++.+..+|+.|.+|+.|++++|.+... +|.. .+ |+|+||++++++.++++|++
T Consensus 81 vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~iP~~ 138 (343)
T 2dq4_A 81 VGDHVSLESHIVCHACPACRTGNYHVCLNTQI---LGVD-RD------------------GGFAEYVVVPAENAWVNPKD 138 (343)
T ss_dssp TTCEEEECCEECCSCSHHHHTTCGGGCTTCEE---BTTT-BC------------------CSSBSEEEEEGGGEEEECTT
T ss_pred CCCEEEECCCCCCCCChhhhCcCcccCCCcce---ecCC-CC------------------CcceeEEEEchHHeEECCCC
Confidence 99999999999999999999999999986642 2221 23 49999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
+++++||++. ++.|||+++.+..++ +|++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++ +++++++
T Consensus 139 ~~~~~aa~~~-~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~ 215 (343)
T 2dq4_A 139 LPFEVAAILE-PFGNAVHTVYAGSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNP 215 (343)
T ss_dssp SCHHHHTTHH-HHHHHHHHHHSTTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECT
T ss_pred CCHHHHHhhh-HHHHHHHHHHHhCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCc
Confidence 9999999874 778999998657888 999999999999999999999999997899999999999999999 9999998
Q ss_pred CCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccc-hhe-eeceEEEeeecCC
Q 017431 239 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP-FQL-VTGRVWKGTAFGG 316 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~-~~~~~~~g~~~~~ 316 (371)
.+ .++.+.+++.+++++|++||++|++..++.++++++++ |+++.+|.... ..+++. ..+ .+++++.|+....
T Consensus 216 ~~--~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~--~~~~~~~~~~~~~~~~i~g~~~~~ 290 (343)
T 2dq4_A 216 LE--EDLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPG-GEARILGIPSD--PIRFDLAGELVMRGITAFGIAGRR 290 (343)
T ss_dssp TT--SCHHHHHHHHHSSCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCSS--CEEECHHHHTGGGTCEEEECCSCC
T ss_pred Cc--cCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCC--CceeCcHHHHHhCceEEEEeecCC
Confidence 76 67888888888339999999999977899999999996 99999987532 344444 333 3488888875431
Q ss_pred CcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEecC
Q 017431 317 FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKMQ 370 (371)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~~ 370 (371)
..+++++++++++++++++.++++++|+|+++++|++.+.+++..|+||+++
T Consensus 291 --~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~gKvv~~~~ 342 (343)
T 2dq4_A 291 --LWQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQAVKVILDPK 342 (343)
T ss_dssp --TTHHHHHHHHHHHHTSSCCGGGEEEEEEGGGHHHHHHHHHHSSCSEEEEETT
T ss_pred --CHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCceEEEEeeC
Confidence 2467999999999999988888999999999999999998876689999886
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-56 Score=422.55 Aligned_cols=331 Identities=27% Similarity=0.394 Sum_probs=289.3
Q ss_pred CcceEEeecCCCCeEEEEeeCCC-CCCCeEEEEEeeeecCccccccccCCCC---CCCCCcccccceeEEEEEeCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAP-PQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTE 76 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~-~~~~eVlV~v~~~~i~~~D~~~~~g~~~---~~~~p~v~G~e~~G~V~~~G~~v~~ 76 (371)
||||+++.+++++++++++|.|+ |.++||+|||++++||++|++.+.|.++ ...+|.++|||++|+|+++|+++++
T Consensus 15 ~mka~~~~~~g~~l~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~ 94 (359)
T 1h2b_A 15 RLKAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEG 94 (359)
T ss_dssp --CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCS
T ss_pred hceEEEEecCCCCcEEEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceEEEEEECCCCCC
Confidence 59999999998779999999999 9999999999999999999999999765 3468999999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecC
Q 017431 77 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 156 (371)
Q Consensus 77 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP 156 (371)
|++||||+..+..+|+.|.+|+.+.+++|.+... .|+. .+ |+|+||+++|++.++++|
T Consensus 95 ~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~---~G~~-~~------------------G~~aey~~v~~~~~~~iP 152 (359)
T 1h2b_A 95 LEKGDPVILHPAVTDGTCLACRAGEDMHCENLEF---PGLN-ID------------------GGFAEFMRTSHRSVIKLP 152 (359)
T ss_dssp CCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBC---BTTT-BC------------------CSSBSEEEECGGGEEECC
T ss_pred CCCCCEEEeCCCCCCCCChhhhCcCcccCCCccc---cccC-CC------------------CcccceEEechHhEEECC
Confidence 9999999999999999999999999999986642 2321 23 499999999999999999
Q ss_pred CCCCcchhh---hccccchhhhhhhhhc-CCCCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhcC
Q 017431 157 PQAPLDKVC---LLGCGVPTGLGAVWNT-AKVEPGSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFG 231 (371)
Q Consensus 157 ~~~~~~~aa---~~~~~~~ta~~~l~~~-~~~~~g~~VlI~Gag~vG~~ai~la~~~-g~~~v~~v~~~~~~~~~~~~~g 231 (371)
+++++++|| .+++++.|||+++.+. .++++|++|||+|+|++|++++|+|+++ |+ +|++++++++++++++++|
T Consensus 153 ~~~~~~~aa~~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga-~Vi~~~~~~~~~~~~~~lG 231 (359)
T 1h2b_A 153 KDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPA-TVIALDVKEEKLKLAERLG 231 (359)
T ss_dssp TTCCHHHHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCC-EEEEEESSHHHHHHHHHTT
T ss_pred CCCCHHHHhhccchhhhHHHHHHHHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHHHHhC
Confidence 999999999 7888899999998665 8999999999999999999999999999 99 8999999999999999999
Q ss_pred CcEEecCCCCCchHHHHHHhhcCC-CccEEEEccCCHH--HHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eece
Q 017431 232 VTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVS--VMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGR 307 (371)
Q Consensus 232 ~~~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~--~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~ 307 (371)
+++++++++ . +.+.+++++++ ++|++||++|++. .++.++++ ++ |+++.+|..... +++...+ .+++
T Consensus 232 a~~vi~~~~--~-~~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~-G~~v~~g~~~~~---~~~~~~~~~~~~ 302 (359)
T 1h2b_A 232 ADHVVDARR--D-PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RM-GRLIIVGYGGEL---RFPTIRVISSEV 302 (359)
T ss_dssp CSEEEETTS--C-HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EE-EEEEECCCSSCC---CCCHHHHHHTTC
T ss_pred CCEEEeccc--h-HHHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CC-CEEEEEeCCCCC---CCCHHHHHhCCc
Confidence 999999877 5 78888889888 9999999999976 78888887 75 999999875432 3444333 3488
Q ss_pred EEEeeecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 308 VWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 308 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
++.|+.... .+++++++++++++++++ .+ ++|+|+++++|++.+.+++.. |+||++
T Consensus 303 ~i~g~~~~~---~~~~~~~~~l~~~g~l~~--~i-~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 359 (359)
T 1h2b_A 303 SFEGSLVGN---YVELHELVTLALQGKVRV--EV-DIHKLDEINDVLERLEKGEVLGRAVLIP 359 (359)
T ss_dssp EEEECCSCC---HHHHHHHHHHHHTTSCCC--CE-EEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred EEEEecCCC---HHHHHHHHHHHHcCCCcc--eE-EEEeHHHHHHHHHHHHcCCCceEEEeeC
Confidence 888876532 467999999999999764 46 999999999999999988865 999874
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-57 Score=424.62 Aligned_cols=338 Identities=23% Similarity=0.280 Sum_probs=291.2
Q ss_pred CcceEEeecCCCCeEEEEeeCC--------CCCCCeEEEEEeeeecCccccccccCC-CC--CCCCCcccccceeEEEEE
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVA--------PPQAGEVRIKILFTALCHTDAYTWSGK-DP--EGLFPCILGHEAAGIVES 69 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~--------~~~~~eVlV~v~~~~i~~~D~~~~~g~-~~--~~~~p~v~G~e~~G~V~~ 69 (371)
+|||+++.+++. ++++++|.| +|.++||+|||++++||++|++.+.+. .. ..++|.++|||++|+|++
T Consensus 8 ~mka~~~~~~~~-l~~~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E~~G~V~~ 86 (363)
T 3m6i_A 8 TNIGVFTNPQHD-LWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVIA 86 (363)
T ss_dssp CCEEEEECTTCC-EEEEECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEE
T ss_pred cceeEEEeCCCc-EEEEEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcceEEEEEE
Confidence 589999998877 999999999 999999999999999999999988732 22 236799999999999999
Q ss_pred eCCCCCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecc
Q 017431 70 VGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD 149 (371)
Q Consensus 70 ~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 149 (371)
+|+++++|++||||++.+..+|+.|.+|+.+.++.|.+... .|....+ |+|+||+.+|+
T Consensus 87 vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~---~g~~~~~------------------G~~aey~~v~~ 145 (363)
T 3m6i_A 87 VHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDF---LSTPPVP------------------GLLRRYVNHPA 145 (363)
T ss_dssp ECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEE---TTSTTSC------------------CSCBSEEEEEG
T ss_pred ECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccc---cCCCCCC------------------ccceeEEEEeh
Confidence 99999999999999999999999999999999999987653 2221123 49999999999
Q ss_pred cceEecCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 017431 150 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 229 (371)
Q Consensus 150 ~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~ 229 (371)
+.++++|+ +++++||++. ++.|||+++ +..++++|++|||+|+|++|++++|+|+.+|+++|++++++++|++++++
T Consensus 146 ~~~~~iP~-~s~~~aa~~~-~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 222 (363)
T 3m6i_A 146 VWCHKIGN-MSYENGAMLE-PLSVALAGL-QRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE 222 (363)
T ss_dssp GGEEECTT-CCHHHHHHHH-HHHHHHHHH-HHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH
T ss_pred hhEEECCC-CCHHHHHhhh-HHHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 99999999 9999999884 888999998 88899999999999999999999999999999669999999999999999
Q ss_pred cCCcEEecCC---CCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-
Q 017431 230 FGVTEFVNPK---DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV- 304 (371)
Q Consensus 230 ~g~~~vi~~~---~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~- 304 (371)
+ ++.++++. ....++.+.+++.+++ ++|++|||+|++.+++.++++++++ |+++.+|..... ..++...+.
T Consensus 223 l-~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~ 298 (363)
T 3m6i_A 223 I-CPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFG-GKVFVIGVGKNE--IQIPFMRASV 298 (363)
T ss_dssp H-CTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECCCCCSC--CCCCHHHHHH
T ss_pred h-chhcccccccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEEccCCCC--ccccHHHHHh
Confidence 9 65555432 1126788889999988 9999999999987899999999996 999999875432 334433433
Q ss_pred eceEEEeeecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCC-Cee-EEEEecCC
Q 017431 305 TGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGG-DCL-RCVLKMQD 371 (371)
Q Consensus 305 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~-~~~-kvvl~~~d 371 (371)
+++++.++... .+++++++++++++++++.++++++|+|+++++|++.+.++ ... |+||+.+|
T Consensus 299 ~~~~i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~ 363 (363)
T 3m6i_A 299 REVDLQFQYRY----CNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQSLE 363 (363)
T ss_dssp HTCEEEECCSC----SSCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEEEEECC-
T ss_pred cCcEEEEccCC----HHHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEEEEecCC
Confidence 37888887643 47899999999999999889999999999999999999987 344 99999875
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-56 Score=415.63 Aligned_cols=338 Identities=25% Similarity=0.399 Sum_probs=289.7
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCcccccccc-CCCCC--CCCCcccccceeEEEEEeCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWS-GKDPE--GLFPCILGHEAAGIVESVGEGVTEV 77 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~-g~~~~--~~~p~v~G~e~~G~V~~~G~~v~~~ 77 (371)
+|||+++.+++. ++++++|.|+|.++||+|||++++||++|++.+. +..+. .++|.++|||++|+|+++|+++++|
T Consensus 4 ~mka~~~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~ 82 (352)
T 1e3j_A 4 DNLSAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHL 82 (352)
T ss_dssp CCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSC
T ss_pred cCEEEEEEcCCc-EEEEEecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeCCCCCCC
Confidence 599999999875 9999999999999999999999999999999887 43321 2579999999999999999999999
Q ss_pred CCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCC
Q 017431 78 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 157 (371)
Q Consensus 78 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~ 157 (371)
++||||++.+..+|+.|.+|+.+.++.|.+... .|....+ |+|+||++++++.++++|+
T Consensus 83 ~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~~------------------G~~aey~~v~~~~~~~iP~ 141 (352)
T 1e3j_A 83 KKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTF---CATPPDD------------------GNLARYYVHAADFCHKLPD 141 (352)
T ss_dssp CTTCEEEECCEECCSSSHHHHTTCGGGCTTCEE---TTBTTBC------------------CSCBSEEEEEGGGEEECCT
T ss_pred CCCCEEEEcCcCCCCCChhhhCcCcccCCCCcc---cCcCCCC------------------ccceeEEEeChHHeEECcC
Confidence 999999999999999999999999999987542 2221123 4999999999999999999
Q ss_pred CCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 158 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
++++++||++ .++.|||+++ +..++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++.++++++|++++++
T Consensus 142 ~~~~~~aa~~-~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~ 218 (352)
T 1e3j_A 142 NVSLEEGALL-EPLSVGVHAC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLV 218 (352)
T ss_dssp TSCHHHHHTH-HHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEE
T ss_pred CCCHHHHHhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEc
Confidence 9999999876 4788999988 78899999999999999999999999999999 6999999999999999999999998
Q ss_pred CCCCCchHHHHHHhhcC---C-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEee
Q 017431 238 PKDHDKPIQQVLVDLTD---G-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGT 312 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~---g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~ 312 (371)
+.+ ..++.+.+.+.++ + ++|++||++|.+..++.++++++++ |+++.+|.... ..+++...+. +++++.++
T Consensus 219 ~~~-~~~~~~~i~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~i~g~ 294 (352)
T 1e3j_A 219 VDP-AKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGMGSQ--MVTVPLVNACAREIDIKSV 294 (352)
T ss_dssp CCT-TTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCSS--CCCCCHHHHHTTTCEEEEC
T ss_pred Ccc-cccHHHHHHHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCC--CccccHHHHHhcCcEEEEe
Confidence 763 1355667777775 4 8999999999977899999999996 99999987432 2344433333 37888887
Q ss_pred ecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCC-ee-EEEEecCC
Q 017431 313 AFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD-CL-RCVLKMQD 371 (371)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~-~~-kvvl~~~d 371 (371)
... .+++++++++++++++++.++++++|+|+++++|++.+.+++ .. |+||++++
T Consensus 295 ~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~ 351 (352)
T 1e3j_A 295 FRY----CNDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISCRQ 351 (352)
T ss_dssp CSC----SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEECCC
T ss_pred ccc----hHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCCCceEEEEecCC
Confidence 542 467999999999999988888999999999999999998876 34 99999863
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-56 Score=412.90 Aligned_cols=334 Identities=31% Similarity=0.472 Sum_probs=291.3
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
|||+++.+++++++++++|.|+|.++||+|||++++||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|++|
T Consensus 1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~GhE~~G~V~~vG~~v~~~~vG 80 (339)
T 1rjw_A 1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVG 80 (339)
T ss_dssp CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred CeEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCCcCCCCCeeccccceEEEEEECCCCCcCCCC
Confidence 899999999967999999999999999999999999999999999987653 3689999999999999999999999999
Q ss_pred CEEeecCCC-CCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCC
Q 017431 81 DHVIPCYQA-ECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 159 (371)
Q Consensus 81 d~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~ 159 (371)
|||++.+.. +|+.|.+|+.++++.|.+... .|.. .+ |+|+||+.+|++.++++|+++
T Consensus 81 drV~~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~~P~~~ 138 (339)
T 1rjw_A 81 DRVGIPWLYSACGHCDYCLSGQETLCEHQKN---AGYS-VD------------------GGYAEYCRAAADYVVKIPDNL 138 (339)
T ss_dssp CEEEECSEEECCSCSHHHHTTCGGGCTTCEE---BTTT-BC------------------CSSBSEEEEEGGGCEECCTTS
T ss_pred CEEEEecCCCCCCCCchhhCcCcccCCCcce---eecC-CC------------------CcceeeEEechHHEEECCCCC
Confidence 999987654 599999999999999986542 2221 23 399999999999999999999
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCC
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 239 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~ 239 (371)
++++||.+++++.|||+++.+. ++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++.++++++|++.++++.
T Consensus 139 ~~~~aa~l~~~~~ta~~~l~~~-~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~d~~ 216 (339)
T 1rjw_A 139 SFEEAAPIFCAGVTTYKALKVT-GAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNPL 216 (339)
T ss_dssp CHHHHGGGGTHHHHHHHHHHHH-TCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECTT
T ss_pred CHHHhhhhhhhHHHHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEecCC
Confidence 9999999999999999998554 89999999999998899999999999999 999999999999999999999999887
Q ss_pred CCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecCCCc
Q 017431 240 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFK 318 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~ 318 (371)
+ .++.+.+.+.+ +++|++||++|.+..++.++++++++ |+++.+|.... ..+++...+. +++++.|+....
T Consensus 217 ~--~~~~~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~-- 288 (339)
T 1rjw_A 217 K--EDAAKFMKEKV-GGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPE--EMPIPIFDTVLNGIKIIGSIVGT-- 288 (339)
T ss_dssp T--SCHHHHHHHHH-SSEEEEEESSCCHHHHHHHHHHEEEE-EEEEECCCCSS--EEEEEHHHHHHTTCEEEECCSCC--
T ss_pred C--ccHHHHHHHHh-CCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCC--CCccCHHHHHhCCcEEEEeccCC--
Confidence 6 56777787777 68999999999978899999999996 99999987542 3455544443 488888876432
Q ss_pred ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecCC
Q 017431 319 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQD 371 (371)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~d 371 (371)
.+++++++++++++++++. +++|+|+++++|++.+.+++.. |+||++++
T Consensus 289 -~~~~~~~~~l~~~g~l~~~---~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~ 338 (339)
T 1rjw_A 289 -RKDLQEALQFAAEGKVKTI---IEVQPLEKINEVFDRMLKGQINGRVVLTLED 338 (339)
T ss_dssp -HHHHHHHHHHHHTTSCCCC---EEEEEGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred -HHHHHHHHHHHHcCCCCcc---EEEEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence 3579999999999998753 5799999999999999988765 99999875
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-56 Score=420.76 Aligned_cols=345 Identities=26% Similarity=0.407 Sum_probs=293.0
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCC-----
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVT----- 75 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~----- 75 (371)
+|||+++.+++++++++++|.|+|.++||+|||++++||++|++.+.|.++...+|.++|||++|+|+++| +|+
T Consensus 17 ~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~P~v~GhE~~G~V~~vG-~V~~~~~~ 95 (380)
T 1vj0_A 17 KAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVN-GEKRDLNG 95 (380)
T ss_dssp EEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEES-SCCBCTTS
T ss_pred heEEEEEecCCCCeEEEEccCCCCCCCEEEEEEeEEeecccchHHhcCCCCCCCCCcccCcCcEEEEEEeC-CccccccC
Confidence 59999999999569999999999999999999999999999999999976645689999999999999999 999
Q ss_pred -CCCCCCEEeecCCCCCCCCcccc-CCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEe-cccce
Q 017431 76 -EVQPGDHVIPCYQAECRECKFCK-SGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVV-HDVSV 152 (371)
Q Consensus 76 -~~~~Gd~V~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v-~~~~v 152 (371)
+|++||||++.+..+|+.|.+|+ .+.++.|.+... +|....++ + .....|+|+||+++ +++.+
T Consensus 96 ~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~---~g~~~~~~--------~---~~~~~G~~aey~~v~~~~~~ 161 (380)
T 1vj0_A 96 ELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKV---YGINRGCS--------E---YPHLRGCYSSHIVLDPETDV 161 (380)
T ss_dssp CBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEE---TTTTCCSS--------S---TTCCCSSSBSEEEECTTCCE
T ss_pred CCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcce---eccccccC--------C---CCCCCccccceEEEcccceE
Confidence 99999999999999999999999 999999986542 22100000 0 00012499999999 99999
Q ss_pred EecCCCCCcc-hhhhccccchhhhhhhhhcCC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc
Q 017431 153 AKIDPQAPLD-KVCLLGCGVPTGLGAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF 230 (371)
Q Consensus 153 ~~lP~~~~~~-~aa~~~~~~~ta~~~l~~~~~-~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~ 230 (371)
+++|++++++ +|++++ +++|||+++ +..+ +++|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++
T Consensus 162 ~~iP~~l~~~~~Aa~~~-~~~ta~~al-~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l 239 (380)
T 1vj0_A 162 LKVSEKDDLDVLAMAMC-SGATAYHAF-DEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEI 239 (380)
T ss_dssp EEECTTSCHHHHHHHTT-HHHHHHHHH-HTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHT
T ss_pred EECCCCCChHHhHhhhc-HHHHHHHHH-HhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHc
Confidence 9999999999 666666 999999998 5678 99999999999999999999999999944999999999999999999
Q ss_pred CCcEEecCC---CCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchh-e-e
Q 017431 231 GVTEFVNPK---DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-L-V 304 (371)
Q Consensus 231 g~~~vi~~~---~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~-~ 304 (371)
|+++++++. + .++.+.+++.+++ ++|++||++|.+..++.++++++++ |+++.+|........+++... + .
T Consensus 240 Ga~~vi~~~~~~~--~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~ 316 (380)
T 1vj0_A 240 GADLTLNRRETSV--EERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAVPQDPVPFKVYEWLVL 316 (380)
T ss_dssp TCSEEEETTTSCH--HHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCSCCCCEEECHHHHTTT
T ss_pred CCcEEEeccccCc--chHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCCCCeeEchHHHHHh
Confidence 999999886 4 6788889999988 9999999999877899999999996 999999986412134455444 3 3
Q ss_pred eceEEEeeecCCCcccCcHHHHHHHHHc--CCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEecC
Q 017431 305 TGRVWKGTAFGGFKSRSQVPWLVDKYMK--KEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKMQ 370 (371)
Q Consensus 305 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~~ 370 (371)
+++++.|+.... .++++++++++++ +++ .++++++|+|+++++|++.+.+++..|+||+++
T Consensus 317 ~~~~i~g~~~~~---~~~~~~~~~l~~~~~g~l--~~~i~~~~~l~~~~~A~~~~~~~~~~Kvvl~~~ 379 (380)
T 1vj0_A 317 KNATFKGIWVSD---TSHFVKTVSITSRNYQLL--SKLITHRLPLKEANKALELMESREALKVILYPE 379 (380)
T ss_dssp TTCEEEECCCCC---HHHHHHHHHHHHTCHHHH--GGGCCEEEEGGGHHHHHHHHHHTSCSCEEEECC
T ss_pred CCeEEEEeecCC---HHHHHHHHHHHHhhcCCe--eeEEEEEEeHHHHHHHHHHHhcCCCceEEEEeC
Confidence 488999876542 4679999999999 887 567889999999999999998765449999875
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-55 Score=409.19 Aligned_cols=336 Identities=25% Similarity=0.380 Sum_probs=293.9
Q ss_pred cceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
|||+++.+++.+ ++++++|.|+|.++||+|||++++||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|+
T Consensus 1 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~ 80 (343)
T 2eih_A 1 MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFA 80 (343)
T ss_dssp CEEEEECSSSSGGGEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSSTTCCSSEECCSEEEEEEEEECSSCCSCC
T ss_pred CeEEEEecCCCCceEEEEecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCCCCCCCcccccceEEEEEEECCCCCCCC
Confidence 899999999976 999999999999999999999999999999999987654 36899999999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||||++.+..+|+.|.+|+.++++.|.+... .|.. .+ |+|+||+.+|++.++++|++
T Consensus 81 vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~---~G~~-~~------------------G~~aey~~v~~~~~~~~P~~ 138 (343)
T 2eih_A 81 PGDEVVINPGLSCGRCERCLAGEDNLCPRYQI---LGEH-RH------------------GTYAEYVVLPEANLAPKPKN 138 (343)
T ss_dssp TTCEEEECCEECCSCSHHHHTTCGGGCTTCEE---TTTS-SC------------------CSSBSEEEEEGGGEEECCTT
T ss_pred CCCEEEECCCCCcccchhhccCcccccccccc---cCcC-CC------------------ccceeEEEeChHHeEECCCC
Confidence 99999999999999999999999999986642 2322 23 49999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
+++++||+++.++.|||+++.+..++++|++|||+|+ |++|++++|+++.+|+ +|+++++++++.++++++|++.+++
T Consensus 139 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~ga~~~~d 217 (343)
T 2eih_A 139 LSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETVN 217 (343)
T ss_dssp SCHHHHHHSHHHHHHHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred CCHHHHhhchhhHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEc
Confidence 9999999999999999999977789999999999998 9999999999999999 9999999999999999999999988
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeeecC
Q 017431 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFG 315 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~ 315 (371)
+.+ .++.+.+.+.+++ ++|++||++|. ..++.++++++++ |+++.+|..... ..+++...+ .+++++.|+...
T Consensus 218 ~~~--~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~~~ 292 (343)
T 2eih_A 218 YTH--PDWPKEVRRLTGGKGADKVVDHTGA-LYFEGVIKATANG-GRIAIAGASSGY-EGTLPFAHVFYRQLSILGSTMA 292 (343)
T ss_dssp TTS--TTHHHHHHHHTTTTCEEEEEESSCS-SSHHHHHHHEEEE-EEEEESSCCCSC-CCCCCTTHHHHTTCEEEECCSC
T ss_pred CCc--ccHHHHHHHHhCCCCceEEEECCCH-HHHHHHHHhhccC-CEEEEEecCCCC-cCccCHHHHHhCCcEEEEecCc
Confidence 876 5677888888877 89999999995 6799999999996 999999875422 223443333 347888887532
Q ss_pred CCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecC
Q 017431 316 GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 370 (371)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~ 370 (371)
..++++++++++++++++ +.++++|+|+++++|++.+.+++.. |+||++.
T Consensus 293 ---~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~ 343 (343)
T 2eih_A 293 ---SKSRLFPILRFVEEGKLK--PVVGQVLPLEAAAEGHRLLEERRVFGKVVLQVG 343 (343)
T ss_dssp ---CGGGHHHHHHHHHHTSSC--CCEEEEEEGGGHHHHHHHHHTTCSSSEEEEECC
T ss_pred ---cHHHHHHHHHHHHcCCCC--CceeEEeeHHHHHHHHHHHHcCCCceEEEEecC
Confidence 346899999999999975 5678999999999999999888765 9999863
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-56 Score=414.40 Aligned_cols=337 Identities=26% Similarity=0.351 Sum_probs=283.5
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
+|||+++.+++++++++++|.|+|.++||+|||++++||++|++.+.|.++..++|.++|||++|+|+++|+++++|++|
T Consensus 4 ~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~V~~vG~~v~~~~vG 83 (348)
T 3two_A 4 QSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIPGHEIAGIIKEVGKGVKKFKIG 83 (348)
T ss_dssp EEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSSCCCSSBCCCCCEEEEEEEECTTCCSCCTT
T ss_pred EEEEEEEccCCCCCeEEEeeCCCCCCCeEEEEEEEeeecccchhhhcCCCCCCCCCeecCcceeEEEEEECCCCCCCCCC
Confidence 49999999999889999999999999999999999999999999999988777889999999999999999999999999
Q ss_pred CEEeecCC-CCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCC
Q 017431 81 DHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 159 (371)
Q Consensus 81 d~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~ 159 (371)
|||++.+. .+|+.|.+|+.+++++|. ... .|+. .+. .+ .. .....|+|+||+++|++.++++|+++
T Consensus 84 drV~~~~~~~~Cg~C~~C~~g~~~~c~-~~~---~~~~-~~~-~~--~~-----~~~~~G~~aey~~v~~~~~~~iP~~~ 150 (348)
T 3two_A 84 DVVGVGCFVNSCKACKPCKEHQEQFCT-KVV---FTYD-CLD-SF--HD-----NEPHMGGYSNNIVVDENYVISVDKNA 150 (348)
T ss_dssp CEEEECSEEECCSCSHHHHTTCGGGCT-TCE---ESSS-SEE-GG--GT-----TEECCCSSBSEEEEEGGGCEECCTTS
T ss_pred CEEEEeCCcCCCCCChhHhCCCcccCc-ccc---cccc-ccc-cc--cc-----CCcCCccccceEEechhhEEECCCCC
Confidence 99988663 689999999999999998 221 1111 000 00 00 01112599999999999999999999
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCC
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 239 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~ 239 (371)
++++||.+++++.|||+++. ..++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++.++++++|+++++ .
T Consensus 151 ~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~-~- 226 (348)
T 3two_A 151 PLEKVAPLLCAGITTYSPLK-FSKVTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSMGVKHFY-T- 226 (348)
T ss_dssp CHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHHTTCSEEE-S-
T ss_pred CHHHhhhhhhhHHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCeec-C-
Confidence 99999999999999999985 4599999999999999999999999999999 899999999999999999999988 2
Q ss_pred CCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCccc-ccchhe--eeceEEEeeecCC
Q 017431 240 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS-TRPFQL--VTGRVWKGTAFGG 316 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~-~~~~~~--~~~~~~~g~~~~~ 316 (371)
+ .+. +. .++|++||++|++..++.++++++++ |+++.+|.... .... ++...+ .+++++.|+....
T Consensus 227 ~--~~~---~~----~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~~~i~g~~~~~ 295 (348)
T 3two_A 227 D--PKQ---CK----EELDFIISTIPTHYDLKDYLKLLTYN-GDLALVGLPPV-EVAPVLSVFDFIHLGNRKVYGSLIGG 295 (348)
T ss_dssp S--GGG---CC----SCEEEEEECCCSCCCHHHHHTTEEEE-EEEEECCCCCG-GGCCEEEHHHHHHTCSCEEEECCSCC
T ss_pred C--HHH---Hh----cCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEECCCCC-CCcccCCHHHHHhhCCeEEEEEecCC
Confidence 2 211 11 18999999999975799999999996 99999987541 1222 443443 3488999887653
Q ss_pred CcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecCC
Q 017431 317 FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQD 371 (371)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~d 371 (371)
.+++++++++++++++++. +++|+|+++++|++.+.+++.. |+||++++
T Consensus 296 ---~~~~~~~~~l~~~g~l~~~---~~~~~l~~~~~A~~~~~~~~~~gKvVi~~~~ 345 (348)
T 3two_A 296 ---IKETQEMVDFSIKHNIYPE---IDLILGKDIDTAYHNLTHGKAKFRYVIDMKK 345 (348)
T ss_dssp ---HHHHHHHHHHHHHTTCCCC---EEEECGGGHHHHHHHHHTTCCCSEEEEEGGG
T ss_pred ---HHHHHHHHHHHHhCCCCce---EEEEEHHHHHHHHHHHHcCCCceEEEEecCC
Confidence 3579999999999998763 4899999999999999998875 99999863
|
| >4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-55 Score=409.68 Aligned_cols=335 Identities=25% Similarity=0.369 Sum_probs=292.6
Q ss_pred cceEEeecCC-CCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 2 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 2 ~~a~~~~~~~-~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
|||+++...+ ++++++++|+|+|+++||||||+++|||++|+++++|.++. ++|.++|||++|+|+++|++|++|++|
T Consensus 1 MKA~v~~~~~~~~~~l~e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~~~-~~p~i~GhE~aG~V~~vG~~V~~~~~G 79 (348)
T 4eez_A 1 MKAAVVRHNPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFGN-KAGTVLGHEGIGIVKEIGADVSSLQVG 79 (348)
T ss_dssp CEEEEECSSCCSSEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTTCC-CTTCBCCSEEEEEEEEECTTCCSCCTT
T ss_pred CeEEEEEcCCCCcEEEEEeECCCCCCCEEEEEEEEEEECHHHHHHhcCCCCC-CCCcccceeEEEEEEEECceeeecccC
Confidence 8999997543 45999999999999999999999999999999999998765 589999999999999999999999999
Q ss_pred CEEeecCCCC-CCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCC
Q 017431 81 DHVIPCYQAE-CRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 159 (371)
Q Consensus 81 d~V~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~ 159 (371)
|||++.+... |+.|.+|..+..+.|...... +.. .+| +|+||+.++++.++++|+++
T Consensus 80 drV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~-~~G------------------~~ae~~~~~~~~~~~iP~~~ 137 (348)
T 4eez_A 80 DRVSVAWFFEGCGHCEYCVSGNETFCREVKNA---GYS-VDG------------------GMAEEAIVVADYAVKVPDGL 137 (348)
T ss_dssp CEEEEESEEECCSSSHHHHTTCGGGCTTCEEB---TTT-BCC------------------SSBSEEEEEGGGSCBCCTTS
T ss_pred CeEeecccccccCccccccCCccccccccccc---ccc-cCC------------------cceeeccccccceeecCCCC
Confidence 9998877554 578999999999999866532 211 334 99999999999999999999
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCC
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 239 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~ 239 (371)
++++||+++++++|||+++ +..++++|++|||+|+|++|.+++|+++.++..+|++++++++|+++++++|+++++++.
T Consensus 138 ~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~ 216 (348)
T 4eez_A 138 DPIEASSITCAGVTTYKAI-KVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSG 216 (348)
T ss_dssp CHHHHHHHHHHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-
T ss_pred CHHHHhhcccceeeEEeee-cccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCC
Confidence 9999999999999999987 677899999999999999999999999988655999999999999999999999999998
Q ss_pred CCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecCCC
Q 017431 240 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGF 317 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~ 317 (371)
+ .++.+.+++.+++ ++|+++++++++.++..++++++++ |+++.+|.... ..+++...+. +++++.|+..+.
T Consensus 217 ~--~~~~~~v~~~t~g~g~d~~~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~gs~~~~- 290 (348)
T 4eez_A 217 D--VNPVDEIKKITGGLGVQSAIVCAVARIAFEQAVASLKPM-GKMVAVAVPNT--EMTLSVPTVVFDGVEVAGSLVGT- 290 (348)
T ss_dssp C--CCHHHHHHHHTTSSCEEEEEECCSCHHHHHHHHHTEEEE-EEEEECCCCSC--EEEECHHHHHHSCCEEEECCSCC-
T ss_pred C--CCHHHHhhhhcCCCCceEEEEeccCcchhheeheeecCC-ceEEEEeccCC--CCccCHHHHHhCCeEEEEEecCC-
Confidence 8 7888999999999 9999999999999999999999996 99999987543 3344444433 488999887653
Q ss_pred cccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecCC
Q 017431 318 KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQD 371 (371)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~d 371 (371)
+.++++++++++++++++ ++++|+|+|+++|++.+++++.. |+||+|++
T Consensus 291 --~~~~~~~~~l~~~g~i~p---~~~~~~l~~~~~A~~~l~~g~~~GKvVl~~sk 340 (348)
T 4eez_A 291 --RLDLAEAFQFGAEGKVKP---IVATRKLEEINDIIDEMKAGKIEGRMVIDFTK 340 (348)
T ss_dssp --HHHHHHHHHHHHTTSCCC---CEEEECGGGHHHHHHHHHTTCCSSEEEEECC-
T ss_pred --HHHHHHHHHHHHcCCCEE---EEEEEeHHHHHHHHHHHHCCCCccEEEEEccc
Confidence 468999999999999864 35899999999999999999886 99999863
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-54 Score=404.82 Aligned_cols=338 Identities=27% Similarity=0.434 Sum_probs=291.5
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQP 79 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~~~ 79 (371)
+|||+++.+++.+++++++|.|+|.++||+|||++++||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|++
T Consensus 5 ~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~~ 84 (347)
T 2hcy_A 5 TQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKGWKI 84 (347)
T ss_dssp EEEEEEESSTTCCCEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSEECCCEEEEEEEEECTTCCSCCT
T ss_pred ccEEEEEeCCCCCCEEEEeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCCCCCCCCcccCccceEEEEEECCCCCCCcC
Confidence 5999999999967999999999999999999999999999999999987653 368999999999999999999999999
Q ss_pred CCEEeecCCC-CCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 80 GDHVIPCYQA-ECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 80 Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
||||++.+.. +|+.|.+|+.+++++|.+... .|.. .+ |+|+||+.+|++.++++|++
T Consensus 85 GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~iP~~ 142 (347)
T 2hcy_A 85 GDYAGIKWLNGSCMACEYCELGNESNCPHADL---SGYT-HD------------------GSFQQYATADAVQAAHIPQG 142 (347)
T ss_dssp TCEEEECSEEECCSSSTTTTTTCGGGCTTCEE---BTTT-BC------------------CSSBSEEEEETTTSEEECTT
T ss_pred CCEEEEecCCCCCCCChhhhCCCcccCccccc---cccC-CC------------------CcceeEEEeccccEEECCCC
Confidence 9999987654 599999999999999986542 2221 23 39999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
+++++||.+++++.|||+++.+ .++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++++|++.+++
T Consensus 143 ~~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~~g~~~~~d 220 (347)
T 2hcy_A 143 TDLAQVAPILCAGITVYKALKS-ANLMAGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSIGGEVFID 220 (347)
T ss_dssp CCHHHHGGGGTHHHHHHHHHHT-TTCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHHTTCCEEEE
T ss_pred CCHHHHHHHhhhHHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHHcCCceEEe
Confidence 9999999999999999999854 48999999999998 9999999999999999 9999999999999999999998888
Q ss_pred CCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecCC
Q 017431 238 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGG 316 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~ 316 (371)
+.+ ..++.+.+.+.+++++|++||++|....++.++++|+++ |+++.+|... ....+++...+. +++++.|+....
T Consensus 221 ~~~-~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~-G~iv~~g~~~-~~~~~~~~~~~~~~~~~i~g~~~~~ 297 (347)
T 2hcy_A 221 FTK-EKDIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRAN-GTTVLVGMPA-GAKCCSDVFNQVVKSISIVGSYVGN 297 (347)
T ss_dssp TTT-CSCHHHHHHHHHTSCEEEEEECSSCHHHHHHHTTSEEEE-EEEEECCCCT-TCEEEEEHHHHHHTTCEEEECCCCC
T ss_pred cCc-cHhHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEEeCCC-CCCCCCCHHHHhhCCcEEEEccCCC
Confidence 763 256777787777668999999999978899999999996 9999998853 233455544443 488888876542
Q ss_pred CcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecCC
Q 017431 317 FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQD 371 (371)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~d 371 (371)
.+++++++++++++++++. +++|+|+++++|++.+.+++.. |+||++++
T Consensus 298 ---~~~~~~~~~l~~~g~l~~~---~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~ 347 (347)
T 2hcy_A 298 ---RADTREALDFFARGLVKSP---IKVVGLSTLPEIYEKMEKGQIVGRYVVDTSK 347 (347)
T ss_dssp ---HHHHHHHHHHHHTTSCCCC---EEEEEGGGHHHHHHHHHTTCCSSEEEEESCC
T ss_pred ---HHHHHHHHHHHHhCCCccc---eEEEcHHHHHHHHHHHHcCCcceeEEEecCC
Confidence 3579999999999998753 5799999999999999988765 99999864
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-55 Score=417.80 Aligned_cols=344 Identities=19% Similarity=0.277 Sum_probs=290.4
Q ss_pred CcceEEeecCCCCeEEEEeeCCCC-CC-----CeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPP-QA-----GEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGV 74 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~-~~-----~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v 74 (371)
||||+++.+++. ++++++|.|+| .+ +||+|||++++||++|++.+.|.++ .++|.++|||++|+|+++|++|
T Consensus 2 ~MkA~~~~~~~~-l~~~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~~-~~~p~v~GhE~~G~V~~vG~~v 79 (398)
T 2dph_A 2 GNKSVVYHGTRD-LRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFI-VPKGHVLGHEITGEVVEKGSDV 79 (398)
T ss_dssp CEEEEEEEETTE-EEEEEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSSC-CCTTCBCCCCEEEEEEEECTTC
T ss_pred ccEEEEEEcCCC-EEEEEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCCC-CCCCcccCCceEEEEEEECCCC
Confidence 699999999875 99999999987 68 9999999999999999999998743 3579999999999999999999
Q ss_pred CCCCCCCEEeecCCCCCCCCccccCCCCcccccccCC-----CccceecCCCccccccCCcceeeccCCcceeeeEEecc
Q 017431 75 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGA-----TGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD 149 (371)
Q Consensus 75 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 149 (371)
++|++||||++.+..+|+.|.+|+.+.+++|.+.... ..+|.. . ....|+|+||+++++
T Consensus 80 ~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~--------------~--~~~~G~~aey~~v~~ 143 (398)
T 2dph_A 80 ELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFD--------------L--KGWSGGQAEYVLVPY 143 (398)
T ss_dssp CSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTT--------------B--SSCCCSSBSEEEESS
T ss_pred CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccc--------------c--CCCCceeeeeEEecc
Confidence 9999999999999999999999999999999861100 011110 0 001259999999998
Q ss_pred c--ceEecCCCCCcch----hhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 017431 150 V--SVAKIDPQAPLDK----VCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK 223 (371)
Q Consensus 150 ~--~v~~lP~~~~~~~----aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~ 223 (371)
+ .++++|+++++++ ||+++.+++|||+++ +..++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++
T Consensus 144 ~~~~~~~iP~~~~~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~ 222 (398)
T 2dph_A 144 ADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGC-VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPER 222 (398)
T ss_dssp HHHHCEECSSHHHHHHTHHHHTTTTTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHH
T ss_pred ccCeEEECCCCCChhhhcchhhhhcCHHHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHH
Confidence 7 8999999999998 888999999999998 78899999999999999999999999999999889999999999
Q ss_pred HHHHHhcCCcEEecCCCCCchH-HHHHHhhcCC-CccEEEEccCCH--------------HHHHHHHHHhccCCceEEEE
Q 017431 224 FDRAKNFGVTEFVNPKDHDKPI-QQVLVDLTDG-GVDYSFECIGNV--------------SVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 224 ~~~~~~~g~~~vi~~~~~~~~~-~~~~~~~~~g-g~dvvid~~g~~--------------~~~~~~~~~l~~~~G~iv~~ 287 (371)
+++++++|++ ++++.+ .++ .+.+++.+++ ++|++||++|+. .+++.++++++++ |+++.+
T Consensus 223 ~~~a~~lGa~-~i~~~~--~~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~g-G~iv~~ 298 (398)
T 2dph_A 223 LKLLSDAGFE-TIDLRN--SAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAG-GAIGIP 298 (398)
T ss_dssp HHHHHTTTCE-EEETTS--SSCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEE-EEEECC
T ss_pred HHHHHHcCCc-EEcCCC--cchHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcC-CEEEEe
Confidence 9999999995 888776 454 7788888888 999999999975 2689999999996 999999
Q ss_pred ccCCC-----------CCcccccchhe-eeceEEEeeecCCCcccCcHHHHHHHHHcCCCC--CCCceeeeeecccHHHH
Q 017431 288 GVAAS-----------GQEISTRPFQL-VTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIK--VDEYVTHNMTLGEINEA 353 (371)
Q Consensus 288 g~~~~-----------~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~A 353 (371)
|...+ ....+++...+ .+++++.++... ..++++++++++++++++ +.++++++|+|+++++|
T Consensus 299 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~---~~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~~~~A 375 (398)
T 2dph_A 299 GIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAP---VTNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPDG 375 (398)
T ss_dssp SCCCSCCSSCSSHHHHTTEEEEEHHHHHHTTCEEECSSCC---GGGTHHHHHHHHHTTCCHHHHHHHCEEEECSTTHHHH
T ss_pred ccccccccccccccccCCcccccHHHHhhcCCEEEEeccC---cHHHHHHHHHHHHcCCCCccchhhEEEEEcHHHHHHH
Confidence 87521 12233443333 347788776432 346789999999999988 76678899999999999
Q ss_pred HHHHhCCCeeEEEEecC
Q 017431 354 FRYMHGGDCLRCVLKMQ 370 (371)
Q Consensus 354 ~~~~~~~~~~kvvl~~~ 370 (371)
++.+.+++..|+||+++
T Consensus 376 ~~~~~~~~~gKvvv~~~ 392 (398)
T 2dph_A 376 YAKFDKGSPAKFVIDPH 392 (398)
T ss_dssp HHHHHTTCSCEEEECTT
T ss_pred HHHHhcCCceEEEEecC
Confidence 99998876689999875
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-55 Score=412.29 Aligned_cols=335 Identities=21% Similarity=0.296 Sum_probs=284.5
Q ss_pred CcceEEeecCCCCeEEEE--eeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCC-CC
Q 017431 1 MCKAAVAWEPNKPLVIED--VQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVT-EV 77 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~--~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~-~~ 77 (371)
||||+++.++++++++++ +|.|+|.++||+|||++++||++|++.+.|.++..++|.++|||++|+|+++|++++ +|
T Consensus 6 ~mka~~~~~~~~~l~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~GhE~~G~V~~vG~~v~~~~ 85 (360)
T 1piw_A 6 KFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSNSGL 85 (360)
T ss_dssp CEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTTCCSSC
T ss_pred heEEEEEecCCCCeeEEeccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCCCCCCCcccCcCceEEEEEeCCCCCCCC
Confidence 599999999987799999 999999999999999999999999999999876557899999999999999999999 99
Q ss_pred CCCCEEeecC-CCCCCCCccccCCCCcccccc-cCCCc---cceecCCCccccccCCcceeeccCCcceeeeEEecccce
Q 017431 78 QPGDHVIPCY-QAECRECKFCKSGKTNLCGKV-RGATG---AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSV 152 (371)
Q Consensus 78 ~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~---~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v 152 (371)
++||||++.+ ..+|+.|.+|+.+++++|.+. ..... .|.. .+ |+|+||++++++.+
T Consensus 86 ~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~-~~------------------G~~aey~~v~~~~~ 146 (360)
T 1piw_A 86 KVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYV-SQ------------------GGYANYVRVHEHFV 146 (360)
T ss_dssp CTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCB-CC------------------CSSBSEEEEEGGGE
T ss_pred CCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCcc-CC------------------CcceeEEEEchhhe
Confidence 9999996554 568999999999999999865 11000 0111 22 49999999999999
Q ss_pred EecCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 017431 153 AKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 232 (371)
Q Consensus 153 ~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~ 232 (371)
+++|+++++++||.+++++.|||+++.+ .++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|+
T Consensus 147 ~~iP~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~lGa 224 (360)
T 1piw_A 147 VPIPENIPSHLAAPLLCGGLTVYSPLVR-NGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGA 224 (360)
T ss_dssp EECCTTSCHHHHGGGGTHHHHHHHHHHH-TTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTC
T ss_pred EECCCCCCHHHhhhhhhhHHHHHHHHHH-cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCC
Confidence 9999999999999999999999999865 899999999999999999999999999999 79999999999999999999
Q ss_pred cEEecCCCCCc-hHHHHHHhhcCCCccEEEEccCC--HHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceE
Q 017431 233 TEFVNPKDHDK-PIQQVLVDLTDGGVDYSFECIGN--VSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRV 308 (371)
Q Consensus 233 ~~vi~~~~~~~-~~~~~~~~~~~gg~dvvid~~g~--~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~ 308 (371)
++++++.+ . ++.+.+. +++|++||++|. +..++.++++++++ |+++.+|.... . .+++...+ .++++
T Consensus 225 ~~v~~~~~--~~~~~~~~~----~~~D~vid~~g~~~~~~~~~~~~~l~~~-G~iv~~g~~~~-~-~~~~~~~~~~~~~~ 295 (360)
T 1piw_A 225 DHYIATLE--EGDWGEKYF----DTFDLIVVCASSLTDIDFNIMPKAMKVG-GRIVSISIPEQ-H-EMLSLKPYGLKAVS 295 (360)
T ss_dssp SEEEEGGG--TSCHHHHSC----SCEEEEEECCSCSTTCCTTTGGGGEEEE-EEEEECCCCCS-S-CCEEECGGGCBSCE
T ss_pred CEEEcCcC--chHHHHHhh----cCCCEEEECCCCCcHHHHHHHHHHhcCC-CEEEEecCCCC-c-cccCHHHHHhCCeE
Confidence 99998765 3 4544332 489999999998 66789999999996 99999987542 1 13333333 34888
Q ss_pred EEeeecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeeccc--HHHHHHHHhCCCee-EEEEecCC
Q 017431 309 WKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGE--INEAFRYMHGGDCL-RCVLKMQD 371 (371)
Q Consensus 309 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~A~~~~~~~~~~-kvvl~~~d 371 (371)
+.|+.... .+++++++++++++++++ .+ ++|+|++ +++|++.+.+++.. |+||+++|
T Consensus 296 i~g~~~~~---~~~~~~~~~l~~~g~l~~--~i-~~~~l~~~~~~~A~~~~~~~~~~gKvvi~~~~ 355 (360)
T 1piw_A 296 ISYSALGS---IKELNQLLKLVSEKDIKI--WV-ETLPVGEAGVHEAFERMEKGDVRYRFTLVGYD 355 (360)
T ss_dssp EEECCCCC---HHHHHHHHHHHHHTTCCC--CE-EEEESSHHHHHHHHHHHHHTCCSSEEEEECCH
T ss_pred EEEEecCC---HHHHHHHHHHHHhCCCcc--eE-EEEeccHhHHHHHHHHHHCCCCceEEEEecCc
Confidence 88876532 357999999999999764 35 8999999 99999999888765 99999864
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-54 Score=406.77 Aligned_cols=330 Identities=28% Similarity=0.425 Sum_probs=265.3
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCC--CCCCCcccccceeEEEEEeCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP--EGLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~--~~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
||||+++.+++++++++++|.|+|.++||+|||++++||++|++.+.|.++ ...+|.++|||++|+|+++|++ ++|+
T Consensus 3 ~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G~V~~vG~~-~~~~ 81 (344)
T 2h6e_A 3 KSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGEL-AKVK 81 (344)
T ss_dssp EEEBCEECSCCC-----EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEEEEEEECTT-CCCC
T ss_pred eeEEEEEecCCCCCeEEEeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceEEEEEECCC-CCCC
Confidence 599999999987799999999999999999999999999999999999776 3468999999999999999999 9999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEec-ccceEecCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVH-DVSVAKIDP 157 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~-~~~v~~lP~ 157 (371)
+||||+..+..+|+.|.+|+.+.+++|.+... +|.. .+ |+|+||+++| ++.++++ +
T Consensus 82 ~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~---~G~~-~~------------------G~~aey~~v~~~~~~~~i-~ 138 (344)
T 2h6e_A 82 KGDNVVVYATWGDLTCRYCREGKFNICKNQII---PGQT-TN------------------GGFSEYMLVKSSRWLVKL-N 138 (344)
T ss_dssp TTCEEEECSCBCCSCSTTGGGTCGGGCTTCBC---BTTT-BC------------------CSSBSEEEESCGGGEEEE-S
T ss_pred CCCEEEECCCCCCCCChhhhCCCcccCCCccc---cccc-cC------------------CcceeeEEecCcccEEEe-C
Confidence 99999999889999999999999999986542 2322 23 3999999999 9999999 9
Q ss_pred CCCcchhhhccccchhhhhhhhhc----CCCCCCCEEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHhcC
Q 017431 158 QAPLDKVCLLGCGVPTGLGAVWNT----AKVEPGSIVAVFGLGTVGLAVAEGAKAA--GASRVIGIDIDPKKFDRAKNFG 231 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~ta~~~l~~~----~~~~~g~~VlI~Gag~vG~~ai~la~~~--g~~~v~~v~~~~~~~~~~~~~g 231 (371)
++++++||.+++++.|||+++... .++ +|++|||+|+|++|++++|+|+.+ |+ +|+++++++++.++++++|
T Consensus 139 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~lG 216 (344)
T 2h6e_A 139 SLSPVEAAPLADAGTTSMGAIRQALPFISKF-AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALELG 216 (344)
T ss_dssp SSCHHHHGGGGTHHHHHHHHHHHHHHHHTTC-SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHHHT
T ss_pred CCCHHHhhhhhhhhHHHHHHHHhhhhcccCC-CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHHhC
Confidence 999999999999999999998665 378 999999999999999999999999 99 8999999999999999999
Q ss_pred CcEEecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEE
Q 017431 232 VTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVW 309 (371)
Q Consensus 232 ~~~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~ 309 (371)
+++++++.+ . .+.+.+++++ ++|++||++|.+..++.++++++++ |+++.+|.... ..+++...+. +++++
T Consensus 217 a~~vi~~~~--~--~~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~--~~~~~~~~~~~~~~~i 289 (344)
T 2h6e_A 217 ADYVSEMKD--A--ESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQE-GAIILVGMEGK--RVSLEAFDTAVWNKKL 289 (344)
T ss_dssp CSEEECHHH--H--HHHHHHHHTTCCEEEEEESSCCHHHHHHHHHHEEEE-EEEEECCCCSS--CCCCCHHHHHHTTCEE
T ss_pred CCEEecccc--c--hHHHHHhhcCCCccEEEECCCChHHHHHHHHHhhcC-CEEEEeCCCCC--CcccCHHHHhhCCcEE
Confidence 999987642 0 2234555656 8999999999976899999999996 99999987542 2344444433 48888
Q ss_pred EeeecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 310 KGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 310 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
.|+.... .+++++++++++++++++ .+ ++|+|+++++|++.+++++.. |+||++
T Consensus 290 ~g~~~~~---~~~~~~~~~l~~~g~i~~--~i-~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 344 (344)
T 2h6e_A 290 LGSNYGS---LNDLEDVVRLSESGKIKP--YI-IKVPLDDINKAFTNLDEGRVDGRQVITP 344 (344)
T ss_dssp EECCSCC---HHHHHHHHHHHHTTSSCC--CE-EEECC----------------CEEEECC
T ss_pred EEEecCC---HHHHHHHHHHHHcCCCCc--ce-EEEeHHHHHHHHHHHHcCCCceEEEEeC
Confidence 8876432 467999999999999764 46 999999999999999988765 999864
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-54 Score=404.41 Aligned_cols=333 Identities=26% Similarity=0.370 Sum_probs=290.8
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCC--------CCCCCcccccceeEEEEEeCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP--------EGLFPCILGHEAAGIVESVGEG 73 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~--------~~~~p~v~G~e~~G~V~~~G~~ 73 (371)
|||+++.+++++++++++|.|+|.++||+|||.+++||++|++.+.|.++ ...+|.++|||++|+|+++|++
T Consensus 1 Mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~ 80 (347)
T 1jvb_A 1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE 80 (347)
T ss_dssp CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred CeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEECCC
Confidence 89999999987799999999999999999999999999999999988655 2368999999999999999999
Q ss_pred CCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecc-cce
Q 017431 74 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD-VSV 152 (371)
Q Consensus 74 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~v 152 (371)
+++|++||||+..+..+|+.|.+|+.+++++|.+... +|+. .+ |+|+||+.+|+ +.+
T Consensus 81 v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~---~G~~-~~------------------G~~aey~~v~~~~~~ 138 (347)
T 1jvb_A 81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRW---LGIN-FD------------------GAYAEYVIVPHYKYM 138 (347)
T ss_dssp CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEE---BTTT-BC------------------CSSBSEEEESCGGGE
T ss_pred CCCCCCCCEEEeCCCCCCCCChhhhCcCcccCccccc---cccc-CC------------------CcceeEEEecCccce
Confidence 9999999999988989999999999999999986542 2321 23 39999999999 999
Q ss_pred EecCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhc
Q 017431 153 AKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNF 230 (371)
Q Consensus 153 ~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~-g~~~v~~v~~~~~~~~~~~~~ 230 (371)
+++ +++++++||.+++++.|||+++. ..++++|++|||+|+ |++|++++|+++.+ |+ +|+++++++++.++++++
T Consensus 139 ~~i-~~~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~ 215 (347)
T 1jvb_A 139 YKL-RRLNAVEAAPLTCSGITTYRAVR-KASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRA 215 (347)
T ss_dssp EEC-SSSCHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHH
T ss_pred EEe-CCCCHHHcccchhhHHHHHHHHH-hcCCCCCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHh
Confidence 999 99999999999999999999984 588999999999998 59999999999999 99 899999999999999999
Q ss_pred CCcEEecCCCCCchHHHHHHhhcC-CCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceE
Q 017431 231 GVTEFVNPKDHDKPIQQVLVDLTD-GGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRV 308 (371)
Q Consensus 231 g~~~vi~~~~~~~~~~~~~~~~~~-gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~ 308 (371)
|++.++++.+ .++.+.+.+.+. +++|++||++|.+..++.++++++++ |+++.+|..... . +++...+. ++++
T Consensus 216 g~~~~~~~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~-~-~~~~~~~~~~~~~ 290 (347)
T 1jvb_A 216 GADYVINASM--QDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLFGAD-L-HYHAPLITLSEIQ 290 (347)
T ss_dssp TCSEEEETTT--SCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEE-EEEEECCSSCCC-C-CCCHHHHHHHTCE
T ss_pred CCCEEecCCC--ccHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcC-CEEEEECCCCCC-C-CCCHHHHHhCceE
Confidence 9999998876 567777888886 58999999999977899999999996 999999875412 2 44444433 4888
Q ss_pred EEeeecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 309 WKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 309 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
+.++.... .++++++++++++++++ +.++++|+|+++++|++.+++++.. |+||++
T Consensus 291 i~g~~~~~---~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 347 (347)
T 1jvb_A 291 FVGSLVGN---QSDFLGIMRLAEAGKVK--PMITKTMKLEEANEAIDNLENFKAIGRQVLIP 347 (347)
T ss_dssp EEECCSCC---HHHHHHHHHHHHTTSSC--CCCEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred EEEEeccC---HHHHHHHHHHHHcCCCC--ceEEEEEcHHHHHHHHHHHHCCCCcceEEecC
Confidence 88876532 36799999999999875 5678999999999999999988875 999874
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-54 Score=404.98 Aligned_cols=332 Identities=22% Similarity=0.257 Sum_probs=284.7
Q ss_pred CcceEEeecCC-CCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 017431 1 MCKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 1 ~~~a~~~~~~~-~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
||||+++.+++ ++++++++|.|+|.++||+|||++++||++|++.+.|.++. .++|.++|||++|+|+++|+++++|+
T Consensus 27 ~mkA~~~~~~~~~~l~~~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~ 106 (363)
T 3uog_A 27 WMQEWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGKSVTRFR 106 (363)
T ss_dssp EEEEEEBSCTTTTCCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTCCCCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred hhEEEEEccCCCCCcEEEeeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCcCcccceEEEEEEECCCCCCCC
Confidence 49999999874 45999999999999999999999999999999999987763 47899999999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCc-cceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG-AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 157 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~ 157 (371)
+||||++.+.. .|..+. +.|........ .|.. .+ |+|+||+.+|++.++++|+
T Consensus 107 vGDrV~~~~~~------~c~~g~-~~c~~~~~~~~~~g~~-~~------------------G~~aey~~v~~~~~~~iP~ 160 (363)
T 3uog_A 107 PGDRVISTFAP------GWLDGL-RPGTGRTPAYETLGGA-HP------------------GVLSEYVVLPEGWFVAAPK 160 (363)
T ss_dssp TTCEEEECSST------TCCSSS-CCSCSSCCCCCCTTTT-SC------------------CCCBSEEEEEGGGEEECCT
T ss_pred CCCEEEEeccc------cccccc-cccccccccccccCcC-CC------------------CcceeEEEechHHeEECCC
Confidence 99999987653 456666 77763221111 2221 23 4999999999999999999
Q ss_pred CCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 158 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
++++++||+++++++|||+++.+..++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++.++++++|++++++
T Consensus 161 ~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~ 239 (363)
T 3uog_A 161 SLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGADHGIN 239 (363)
T ss_dssp TSCHHHHHTTTTHHHHHHHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCSEEEE
T ss_pred CCCHHHHhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHHcCCCEEEc
Confidence 999999999999999999999889999999999999999999999999999999 9999999999999999999999998
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecC
Q 017431 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFG 315 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~ 315 (371)
..+ .++.+.+++.+++ ++|++|||+|. ..++.++++++++ |+++.+|.... ...+++...+. +++++.|+...
T Consensus 240 ~~~--~~~~~~v~~~~~g~g~D~vid~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~i~g~~~~ 314 (363)
T 3uog_A 240 RLE--EDWVERVYALTGDRGADHILEIAGG-AGLGQSLKAVAPD-GRISVIGVLEG-FEVSGPVGPLLLKSPVVQGISVG 314 (363)
T ss_dssp TTT--SCHHHHHHHHHTTCCEEEEEEETTS-SCHHHHHHHEEEE-EEEEEECCCSS-CEECCBTTHHHHTCCEEEECCCC
T ss_pred CCc--ccHHHHHHHHhCCCCceEEEECCCh-HHHHHHHHHhhcC-CEEEEEecCCC-cccCcCHHHHHhCCcEEEEEecC
Confidence 543 6788899999988 99999999996 6699999999996 99999998643 23455544433 48899888754
Q ss_pred CCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEec
Q 017431 316 GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 369 (371)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~ 369 (371)
. .++++++++++++++++ ++++++|+|+++++|++.+.+++..|+||++
T Consensus 315 ~---~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~gKvvi~~ 363 (363)
T 3uog_A 315 H---RRALEDLVGAVDRLGLK--PVIDMRYKFTEVPEALAHLDRGPFGKVVIEF 363 (363)
T ss_dssp C---HHHHHHHHHHHHHHTCC--CCEEEEEEGGGHHHHHHTGGGCCSBEEEEEC
T ss_pred C---HHHHHHHHHHHHcCCCc--cceeeEEcHHHHHHHHHHHHcCCCccEEEeC
Confidence 3 46899999999999864 6788999999999999999998844999985
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-54 Score=407.83 Aligned_cols=341 Identities=26% Similarity=0.415 Sum_probs=281.5
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
+||+++..+++++++++++|.|+|.++||+|||++++||++|++.+.|.++...+|.++|||++|+|+++|++|++|++|
T Consensus 22 ~~~a~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~~vG 101 (369)
T 1uuf_A 22 KIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPG 101 (369)
T ss_dssp -CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCSCCTT
T ss_pred eEEEEEEcCCCCCcEEEEecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCCCCCCCeecccCceEEEEEECCCCCCCCCC
Confidence 58999998888889999999999999999999999999999999999876655689999999999999999999999999
Q ss_pred CEEeecCCC-CCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC-
Q 017431 81 DHVIPCYQA-ECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ- 158 (371)
Q Consensus 81 d~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~- 158 (371)
|||++.+.. +|+.|.+|+.++++.|.+.... ..+.....| ....|+|+||+++|++.++++|++
T Consensus 102 DrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~-~~~~~~~~g-------------~~~~G~~aeyv~v~~~~~~~~P~~~ 167 (369)
T 1uuf_A 102 DLVGVGCIVDSCKHCEECEDGLENYCDHMTGT-YNSPTPDEP-------------GHTLGGYSQQIVVHERYVLRIRHPQ 167 (369)
T ss_dssp CEEEECSEEECCSSSHHHHTTCGGGCTTCEET-TTSBCSSTT-------------SBCCCSSBSEEEEEGGGCEECCSCG
T ss_pred CEEEEccCCCCCCCCcccCCCCcccCcchhcc-cccccccCC-------------CCCCCcccceEEEcchhEEECCCCC
Confidence 999988754 5999999999999999865210 000000000 011249999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
+++++||.+++++.|||+++.+ .++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|+++++++
T Consensus 168 ls~~~aa~l~~~~~tA~~al~~-~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~lGa~~vi~~ 245 (369)
T 1uuf_A 168 EQLAAVAPLLCAGITTYSPLRH-WQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVNS 245 (369)
T ss_dssp GGHHHHGGGGTHHHHHHHHHHH-TTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEET
T ss_pred CCHHHhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEecc
Confidence 9999999999999999999865 589999999999999999999999999999 79999999999999999999999988
Q ss_pred CCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecCCC
Q 017431 239 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGF 317 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~ 317 (371)
.+ .++. .+.. +++|++||++|.+..++.++++++++ |+++.+|...... .+++...+. +++++.|+....
T Consensus 246 ~~--~~~~---~~~~-~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~-~~~~~~~~~~~~~~i~g~~~~~- 316 (369)
T 1uuf_A 246 RN--ADEM---AAHL-KSFDFILNTVAAPHNLDDFTTLLKRD-GTMTLVGAPATPH-KSPEVFNLIMKRRAIAGSMIGG- 316 (369)
T ss_dssp TC--HHHH---HTTT-TCEEEEEECCSSCCCHHHHHTTEEEE-EEEEECCCC--------CHHHHHTTTCEEEECCSCC-
T ss_pred cc--HHHH---HHhh-cCCCEEEECCCCHHHHHHHHHHhccC-CEEEEeccCCCCc-cccCHHHHHhCCcEEEEeecCC-
Confidence 76 4433 3333 48999999999866789999999996 9999998753221 134443333 488888876542
Q ss_pred cccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecCC
Q 017431 318 KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQD 371 (371)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~d 371 (371)
.+++++++++++++++++. + ++|+|+++++|++.+.+++.. |+||++++
T Consensus 317 --~~~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~ 366 (369)
T 1uuf_A 317 --IPETQEMLDFCAEHGIVAD--I-EMIRADQINEAYERMLRGDVKYRFVIDNRT 366 (369)
T ss_dssp --HHHHHHHHHHHHHHTCCCC--E-EEECGGGHHHHHHHHHTTCSSSEEEEEGGG
T ss_pred --HHHHHHHHHHHHhCCCCcc--e-EEEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence 3578999999999998753 4 579999999999999988765 99998864
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-54 Score=413.54 Aligned_cols=324 Identities=22% Similarity=0.323 Sum_probs=279.7
Q ss_pred eEEEEeeCCC-CCCCeEEEEEeeeecCccccccccCCC------C-CCCCCcccccceeEEEEEeCCCC------CCCCC
Q 017431 14 LVIEDVQVAP-PQAGEVRIKILFTALCHTDAYTWSGKD------P-EGLFPCILGHEAAGIVESVGEGV------TEVQP 79 (371)
Q Consensus 14 ~~~~~~~~~~-~~~~eVlV~v~~~~i~~~D~~~~~g~~------~-~~~~p~v~G~e~~G~V~~~G~~v------~~~~~ 79 (371)
++++++|.|+ |.++||+|||.+++||++|++.+.|.. + ..++|.++|||++|+|+++|+++ ++|++
T Consensus 42 l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~V~~vG~~v~~~~~~~~~~v 121 (404)
T 3ip1_A 42 VRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEI 121 (404)
T ss_dssp EEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEEEEEECTTCEETTTTEECCT
T ss_pred eEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEEEEEECCCccccccCCCCCC
Confidence 6888999999 999999999999999999999987642 1 23689999999999999999999 88999
Q ss_pred CCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCC
Q 017431 80 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 159 (371)
Q Consensus 80 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~ 159 (371)
||||++.+..+|+.|.+|+.+.++.|.+... .|.. .+ |+|+||+.++++.++++|+++
T Consensus 122 GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~iP~~~ 179 (404)
T 3ip1_A 122 GEPVCAEEMLWCGHCRPCAEGFPNHCENLNE---LGFN-VD------------------GAFAEYVKVDAKYAWSLRELE 179 (404)
T ss_dssp TCEEEECSEECCSCSHHHHTTCGGGCTTCEE---BTTT-BC------------------CSSBSEEEEEGGGEEECGGGB
T ss_pred CCEEEECCccCCCCCHHHHCcCcccCccccc---cCCC-CC------------------CCCcceEEechHHeEeccccc
Confidence 9999999999999999999999999987653 2322 33 499999999999999999988
Q ss_pred C------cchhhhccccchhhhhhhhhc-CCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 017431 160 P------LDKVCLLGCGVPTGLGAVWNT-AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 232 (371)
Q Consensus 160 ~------~~~aa~~~~~~~ta~~~l~~~-~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~ 232 (371)
+ +.++|+++.+++|||+++... .++++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|+
T Consensus 180 ~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa 259 (404)
T 3ip1_A 180 GVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGA 259 (404)
T ss_dssp TTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTC
T ss_pred cccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC
Confidence 6 355888989999999998755 489999999999999999999999999999899999999999999999999
Q ss_pred cEEecCCCCCchHHHHHHhhcCC-CccEEEEccCCH-HHHHHHHHHh----ccCCceEEEEccCCCCCcccccchhee-e
Q 017431 233 TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNV-SVMRAALECC----HKGWGTSVIVGVAASGQEISTRPFQLV-T 305 (371)
Q Consensus 233 ~~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~-~~~~~~~~~l----~~~~G~iv~~g~~~~~~~~~~~~~~~~-~ 305 (371)
++++++.+ .++.+.+++.+++ ++|++|||+|++ ..+..++++| +++ |+++.+|..... .+++...+. +
T Consensus 260 ~~vi~~~~--~~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~-G~iv~~G~~~~~--~~~~~~~~~~~ 334 (404)
T 3ip1_A 260 DHVIDPTK--ENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGIN-ATVAIVARADAK--IPLTGEVFQVR 334 (404)
T ss_dssp SEEECTTT--SCHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCC-CEEEECSCCCSC--EEECHHHHHHT
T ss_pred CEEEcCCC--CCHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCC-cEEEEeCCCCCC--CcccHHHHhcc
Confidence 99999887 7889999999998 999999999997 3677788888 996 999999986432 344544444 3
Q ss_pred ceEEEeeecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEecC
Q 017431 306 GRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKMQ 370 (371)
Q Consensus 306 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~~ 370 (371)
++++.|+.... ..++++.++++++++ +++.++++++|+|+++++|++.+..+ |+||+++
T Consensus 335 ~~~i~g~~~~~--~~~~~~~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~~~~~~G---Kvvl~~~ 393 (404)
T 3ip1_A 335 RAQIVGSQGHS--GHGTFPRVISLMASG-MDMTKIISKTVSMEEIPEYIKRLQTD---KSLVKVT 393 (404)
T ss_dssp TCEEEECCCCC--STTHHHHHHHHHHTT-CCGGGGCCEEECGGGHHHHHHHTTTC---TTCSCEE
T ss_pred ceEEEEecCCC--chHHHHHHHHHHHcC-CChhheEEEEeeHHHHHHHHHHHhCC---cEEEecC
Confidence 88888876432 246899999999999 98888899999999999999998843 6666654
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-55 Score=413.49 Aligned_cols=333 Identities=17% Similarity=0.234 Sum_probs=284.8
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCC---CcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLF---PCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~---p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
|||+++.+++++++++++|.|+|.++||+|||++++||++|++.+.|.++..++ |.++|||++| |+++|++ ++|+
T Consensus 1 MkA~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G-V~~vG~~-~~~~ 78 (357)
T 2b5w_A 1 MKAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHEAVG-VVVDPND-TELE 78 (357)
T ss_dssp CEEEEEETTCSSCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTTSCTTCSEEECCSEEEE-EEEECTT-SSCC
T ss_pred CeEEEEeCCCCceEEEECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCCCCCCCCCcccCceeEE-EEEECCC-CCCC
Confidence 899999999888999999999999999999999999999999999987654456 8999999999 9999999 9999
Q ss_pred CCCEEeecCCCC--CCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecC
Q 017431 79 PGDHVIPCYQAE--CRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 156 (371)
Q Consensus 79 ~Gd~V~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP 156 (371)
+||||++.+..+ |+.|.+|+.++++.|.+..... .|....+| +|+||++++++.++++|
T Consensus 79 vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~-~g~~~~~G------------------~~aey~~v~~~~~~~iP 139 (357)
T 2b5w_A 79 EGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFE-RGIVGAHG------------------YMSEFFTSPEKYLVRIP 139 (357)
T ss_dssp TTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEE-ETTBEECC------------------SCBSEEEEEGGGEEECC
T ss_pred CCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccc-cCccCCCc------------------ceeeEEEEchHHeEECC
Confidence 999999998888 9999999999999998764310 02100233 99999999999999999
Q ss_pred CCCCcchhhhccccchhhhhhhhhcCCCCCC------CEEEEEcCChHHHHH-HHHH-HHcCCCeEEEEcCChh---hHH
Q 017431 157 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPG------SIVAVFGLGTVGLAV-AEGA-KAAGASRVIGIDIDPK---KFD 225 (371)
Q Consensus 157 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g------~~VlI~Gag~vG~~a-i~la-~~~g~~~v~~v~~~~~---~~~ 225 (371)
++++ + +|+++.+++|||+++ +..++++| ++|||+|+|++|+++ +|+| +.+|+++|++++++++ +.+
T Consensus 140 ~~~~-~-~aal~~~~~ta~~al-~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~ 216 (357)
T 2b5w_A 140 RSQA-E-LGFLIEPISITEKAL-EHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTID 216 (357)
T ss_dssp GGGS-T-TGGGHHHHHHHHHHH-HHHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHH
T ss_pred CCcc-h-hhhhhchHHHHHHHH-HhcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHH
Confidence 9999 5 455778999999998 67889999 999999999999999 9999 9999955999999999 999
Q ss_pred HHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe--
Q 017431 226 RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-- 303 (371)
Q Consensus 226 ~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-- 303 (371)
+++++|++++ ++.+ .++.+ +++. ++++|++||++|++..++.++++++++ |+++.+|.... ...+++...+
T Consensus 217 ~~~~lGa~~v-~~~~--~~~~~-i~~~-~gg~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~~~~~ 289 (357)
T 2b5w_A 217 IIEELDATYV-DSRQ--TPVED-VPDV-YEQMDFIYEATGFPKHAIQSVQALAPN-GVGALLGVPSD-WAFEVDAGAFHR 289 (357)
T ss_dssp HHHHTTCEEE-ETTT--SCGGG-HHHH-SCCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCCC-CCCCCCHHHHHH
T ss_pred HHHHcCCccc-CCCc--cCHHH-HHHh-CCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEeCCCC-CCceecHHHHhH
Confidence 9999999998 8776 55666 7777 559999999999977899999999996 99999987642 2344554444
Q ss_pred ---eeceEEEeeecCCCcccCcHHHHHHHHHcC--CCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEecCC
Q 017431 304 ---VTGRVWKGTAFGGFKSRSQVPWLVDKYMKK--EIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKMQD 371 (371)
Q Consensus 304 ---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~~d 371 (371)
.+++++.|+.... .+++++++++++++ ++ +.++++++|+|+++++|++.+ +...|+||+++|
T Consensus 290 ~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~~~~-~~~~i~~~~~l~~~~~A~~~~--~~~gKvvi~~~~ 356 (357)
T 2b5w_A 290 EMVLHNKALVGSVNSH---VEHFEAATVTFTKLPKWF-LEDLVTGVHPLSEFEAAFDDD--DTTIKTAIEFST 356 (357)
T ss_dssp HHHHTTCEEEECCCCC---HHHHHHHHHHHHHSCHHH-HHHHEEEEEEGGGGGGGGCCS--TTCCEEEEECCC
T ss_pred HHHhCCeEEEEeccCC---HHHHHHHHHHHHhCchhh-hhhhcceeecHHHHHHHHHHh--CCCceEEEEecC
Confidence 4588888876542 46799999999999 86 567788999999999999988 445599999875
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-54 Score=412.01 Aligned_cols=346 Identities=23% Similarity=0.308 Sum_probs=286.3
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCC-CCe------EEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQ-AGE------VRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 73 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~-~~e------VlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~ 73 (371)
||||+++.+++. ++++++|.|+|. ++| |+|||++++||++|++.+.|.++ .++|.++|||++|+|+++|++
T Consensus 2 ~Mka~~~~~~~~-l~~~~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~p~v~GhE~~G~V~~vG~~ 79 (398)
T 1kol_A 2 GNRGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT-AQVGLVLGHEITGEVIEKGRD 79 (398)
T ss_dssp CEEEEEEEETTE-EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC-CCTTCBCCCCEEEEEEEECTT
T ss_pred ccEEEEEecCCc-eEEEEecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCCC-CCCCcccCcccEEEEEEECCC
Confidence 699999999875 999999999996 898 99999999999999999998753 357899999999999999999
Q ss_pred CCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCC---ccceecCCCccccccCCcceeeccCCcceeeeEEeccc
Q 017431 74 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGAT---GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV 150 (371)
Q Consensus 74 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~ 150 (371)
+++|++||||++.+..+|+.|.+|+.+++++|.+..... .+|+.. .. ...|+|+||++++++
T Consensus 80 v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~-------------~~--~~~G~~aey~~v~~~ 144 (398)
T 1kol_A 80 VENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVD-------------MG--DWTGGQAEYVLVPYA 144 (398)
T ss_dssp CCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTT-------------SC--CBCCCSBSEEEESSH
T ss_pred CCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeecc-------------CC--CCCceeeeEEEecch
Confidence 999999999999998999999999999999998764210 011100 00 012599999999986
Q ss_pred --ceEecCCCCCcch----hhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 017431 151 --SVAKIDPQAPLDK----VCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF 224 (371)
Q Consensus 151 --~v~~lP~~~~~~~----aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~ 224 (371)
.++++|+++++++ ||+++.++.|||+++. ..++++|++|||+|+|++|++++|+|+++|+++|++++++++|.
T Consensus 145 ~~~~~~~P~~~~~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~ 223 (398)
T 1kol_A 145 DFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGAV-TAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARL 223 (398)
T ss_dssp HHHCEECSCHHHHHHTHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHH
T ss_pred hCeEEECCCCcchhhhcccccccccHHHHHHHHHH-HcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHH
Confidence 8999999999888 7889999999999985 78999999999999999999999999999997899999999999
Q ss_pred HHHHhcCCcEEecCCCCCchHHHHHHhhcCC-CccEEEEccCCH---------------HHHHHHHHHhccCCceEEEEc
Q 017431 225 DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNV---------------SVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 225 ~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~---------------~~~~~~~~~l~~~~G~iv~~g 288 (371)
++++++|++ ++++.+. ..+.+.+++.+++ ++|++||++|++ ..++.++++++++ |+++.+|
T Consensus 224 ~~a~~lGa~-~i~~~~~-~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~G 300 (398)
T 1kol_A 224 AHAKAQGFE-IADLSLD-TPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA-GKIGIPG 300 (398)
T ss_dssp HHHHHTTCE-EEETTSS-SCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEE-EEEEECS
T ss_pred HHHHHcCCc-EEccCCc-chHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcC-CEEEEec
Confidence 999999996 7777651 3377888888887 999999999985 2689999999996 9999998
Q ss_pred cCCCCC-----------cccccchhee-eceEEEeeecCCCcccCcHHHHHHHHHcCCCC-CCCceeeeeecccHHHHHH
Q 017431 289 VAASGQ-----------EISTRPFQLV-TGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIK-VDEYVTHNMTLGEINEAFR 355 (371)
Q Consensus 289 ~~~~~~-----------~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~A~~ 355 (371)
...... .++++...+. +++++.++.. ...++++++++++.+++++ ..++++++|+|+|+++|++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~~~~A~~ 377 (398)
T 1kol_A 301 LYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQT---PVMKYNRALMQAIMWDRINIAEVVGVQVISLDDAPRGYG 377 (398)
T ss_dssp CCCSCCTTCSSHHHHTTCCCCCHHHHHHTTCEEEESSC---CHHHHHHHHHHHHHTTSCCHHHHHTEEEECGGGHHHHHH
T ss_pred cccCCcccccccccccccccccHHHHhhcccEEEeccc---ChHHHHHHHHHHHHcCCCCCccceeEEEEcHHHHHHHHH
Confidence 752111 1233332222 3677776532 1235678899999999987 3456789999999999999
Q ss_pred HHhCCCeeEEEEecC
Q 017431 356 YMHGGDCLRCVLKMQ 370 (371)
Q Consensus 356 ~~~~~~~~kvvl~~~ 370 (371)
.+.+++..|+||+++
T Consensus 378 ~~~~~~~gKvvi~~~ 392 (398)
T 1kol_A 378 EFDAGVPKKFVIDPH 392 (398)
T ss_dssp HHHHTCSCEEEECTT
T ss_pred HHhCCCceEEEEEeC
Confidence 998876689999875
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-53 Score=398.08 Aligned_cols=339 Identities=22% Similarity=0.315 Sum_probs=280.3
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 81 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd 81 (371)
|++++..++.++++++++|.|+|.++||+|||++++||++|++.+.|.++...+|.++|||++|+|+++|+++++|++||
T Consensus 10 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~vGd 89 (357)
T 2cf5_A 10 TTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVGD 89 (357)
T ss_dssp EEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTTCCCSSBCCCCEEEEEEEEECSSCCSCCTTC
T ss_pred eEEEEEccCCCCcEEEEecCCCCCCCEEEEEEEEEeecchhhhhhcCCCCCCCCCeecCcceeEEEEEECCCCCCCCCCC
Confidence 66777777666799999999999999999999999999999999998776556899999999999999999999999999
Q ss_pred EEeecCC-CCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 82 HVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 82 ~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
||++.+. .+|+.|.+|+.+.++.|...... ..+.. ..| ....|+|+||+++|++.++++|++++
T Consensus 90 rV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~-~~~~~-~~g-------------~~~~G~~aey~~v~~~~~~~~P~~ls 154 (357)
T 2cf5_A 90 IVGVGCLVGCCGGCSPCERDLEQYCPKKIWS-YNDVY-ING-------------QPTQGGFAKATVVHQKFVVKIPEGMA 154 (357)
T ss_dssp EEEECSEEECCSSSHHHHTTCGGGCTTCEET-TTSBC-TTS-------------CBCCCSSBSCEEEEGGGEEECCSSCC
T ss_pred EEEEcCCCCCCCCChHHhCcCcccCCCcccc-ccccc-cCC-------------CCCCCccccEEEechhhEEECcCCCC
Confidence 9987654 57999999999999999644211 00000 000 11235999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCC-CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCcEEecC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVE-PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNP 238 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~-~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~vi~~ 238 (371)
+++||.+++++.|||+++. ..+++ +|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++ ++|+++++++
T Consensus 155 ~~~aa~l~~~~~ta~~~l~-~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~vi~~ 232 (357)
T 2cf5_A 155 VEQAAPLLCAGVTVYSPLS-HFGLKQPGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQDLGADDYVIG 232 (357)
T ss_dssp HHHHTGGGTHHHHHHHHHH-HTSTTSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHTTSCCSCEEET
T ss_pred HHHhhhhhhhHHHHHHHHH-hcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHcCCceeecc
Confidence 9999999999999999875 46788 99999999999999999999999999 8999999999998887 9999999987
Q ss_pred CCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCCc
Q 017431 239 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFK 318 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 318 (371)
.+ . +.+.+.+ +++|++||++|.+..++.++++++++ |+++.+|....... .++...+.+++++.|+....
T Consensus 233 ~~--~---~~~~~~~-~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~-~~~~~~~~~~~~i~g~~~~~-- 302 (357)
T 2cf5_A 233 SD--Q---AKMSELA-DSLDYVIDTVPVHHALEPYLSLLKLD-GKLILMGVINNPLQ-FLTPLLMLGRKVITGSFIGS-- 302 (357)
T ss_dssp TC--H---HHHHHST-TTEEEEEECCCSCCCSHHHHTTEEEE-EEEEECSCCSSCCC-CCHHHHHHHTCEEEECCSCC--
T ss_pred cc--H---HHHHHhc-CCCCEEEECCCChHHHHHHHHHhccC-CEEEEeCCCCCCcc-ccCHHHHhCccEEEEEccCC--
Confidence 65 2 3455555 38999999999866689999999996 99999987542211 13333233488888876532
Q ss_pred ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecCC
Q 017431 319 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQD 371 (371)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~d 371 (371)
.+++++++++++++++++. + ++|+|+++++|++.+++++.. |+||++++
T Consensus 303 -~~~~~~~~~l~~~g~l~~~--~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~ 352 (357)
T 2cf5_A 303 -MKETEEMLEFCKEKGLSSI--I-EVVKMDYVNTAFERLEKNDVRYRFVVDVEG 352 (357)
T ss_dssp -HHHHHHHHHHHHHTTCCCC--E-EEEEGGGHHHHHHHHHTTCSSSEEEEETTS
T ss_pred -HHHHHHHHHHHHcCCCCCc--e-EEEeHHHHHHHHHHHHCCCCceEEEEeCCc
Confidence 3578999999999998753 4 799999999999999988775 99998864
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-52 Score=390.96 Aligned_cols=338 Identities=23% Similarity=0.366 Sum_probs=278.4
Q ss_pred CcceEEeecC--CCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 017431 1 MCKAAVAWEP--NKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 1 ~~~a~~~~~~--~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
|||+..+..+ .++++++++|.|+|.++||+|||.+++||++|++.+.|.++...+|.++|||++|+|+++|++|++|+
T Consensus 14 ~mk~~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~~ 93 (366)
T 1yqd_A 14 PVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPLVPGHEIVGEVTEVGSKVKKVN 93 (366)
T ss_dssp SEEEEEEEECSTTCCEEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSSCCCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred CeeEEEEEEcCCCCCcEEEEccCCCCCCCeEEEEEEEEeechhhHHHHcCCCCCCCCCEecccceEEEEEEECCCCCcCC
Confidence 4666655544 45599999999999999999999999999999999998776556899999999999999999999999
Q ss_pred CCCEEeecCC-CCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCC
Q 017431 79 PGDHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 157 (371)
Q Consensus 79 ~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~ 157 (371)
+||||++.+. .+|+.|.+|+.++++.|...... +.+.. ..| ....|+|+||+.+|++.++++|+
T Consensus 94 vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~-~~~~~-~~g-------------~~~~G~~aey~~v~~~~~~~~P~ 158 (366)
T 1yqd_A 94 VGDKVGVGCLVGACHSCESCANDLENYCPKMILT-YASIY-HDG-------------TITYGGYSNHMVANERYIIRFPD 158 (366)
T ss_dssp TTCEEEECSEEECCSSSHHHHTTCGGGCTTCEES-SSSBC-TTS-------------CBCCCSSBSEEEEEGGGCEECCT
T ss_pred CCCEEEEcCCcCCCCCChhhhCcCcccCCccccc-ccccc-cCC-------------CcCCCccccEEEEchhhEEECCC
Confidence 9999987654 57999999999999999654311 01100 000 11235999999999999999999
Q ss_pred CCCcchhhhccccchhhhhhhhhcCCCC-CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCcEE
Q 017431 158 QAPLDKVCLLGCGVPTGLGAVWNTAKVE-PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEF 235 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~-~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~v 235 (371)
++++++||.+++++.|||+++.+ .+++ +|++|||+|+|++|++++|+|+.+|+ +|+++++++++.+.++ ++|++++
T Consensus 159 ~ls~~~aa~l~~~~~ta~~al~~-~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~v 236 (366)
T 1yqd_A 159 NMPLDGGAPLLCAGITVYSPLKY-FGLDEPGKHIGIVGLGGLGHVAVKFAKAFGS-KVTVISTSPSKKEEALKNFGADSF 236 (366)
T ss_dssp TSCTTTTGGGGTHHHHHHHHHHH-TTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHHHTSCCSEE
T ss_pred CCCHHHhhhhhhhHHHHHHHHHh-cCcCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCceE
Confidence 99999999999999999998854 5777 99999999999999999999999999 8999999999988877 9999999
Q ss_pred ecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeec
Q 017431 236 VNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAF 314 (371)
Q Consensus 236 i~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~ 314 (371)
+++.+ . +.+.+.+ +++|++||++|.+..++.++++|+++ |+++.+|.... ..+++...+. +++++.|+..
T Consensus 237 ~~~~~--~---~~~~~~~-~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~--~~~~~~~~~~~~~~~i~g~~~ 307 (366)
T 1yqd_A 237 LVSRD--Q---EQMQAAA-GTLDGIIDTVSAVHPLLPLFGLLKSH-GKLILVGAPEK--PLELPAFSLIAGRKIVAGSGI 307 (366)
T ss_dssp EETTC--H---HHHHHTT-TCEEEEEECCSSCCCSHHHHHHEEEE-EEEEECCCCSS--CEEECHHHHHTTTCEEEECCS
T ss_pred EeccC--H---HHHHHhh-CCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEEccCCC--CCCcCHHHHHhCCcEEEEecC
Confidence 98765 3 3455555 38999999999865689999999996 99999987542 2344444433 4888888765
Q ss_pred CCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecC
Q 017431 315 GGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 370 (371)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~ 370 (371)
.. .+++++++++++++++++. + ++|+|+|+++|++.+++++.. |+||+++
T Consensus 308 ~~---~~~~~~~~~l~~~g~l~~~--~-~~~~l~~~~~A~~~~~~~~~~gKvvl~~~ 358 (366)
T 1yqd_A 308 GG---MKETQEMIDFAAKHNITAD--I-EVISTDYLNTAMERLAKNDVRYRFVIDVG 358 (366)
T ss_dssp CC---HHHHHHHHHHHHHTTCCCC--E-EEECGGGHHHHHHHHHTTCCSSEEEECHH
T ss_pred CC---HHHHHHHHHHHHcCCCCCc--e-EEEcHHHHHHHHHHHHcCCcceEEEEEcc
Confidence 32 3578999999999998753 4 799999999999999988775 9999874
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-51 Score=381.79 Aligned_cols=313 Identities=24% Similarity=0.291 Sum_probs=270.6
Q ss_pred CcceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 017431 1 MCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 1 ~~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
||||+++.++++| +++++.|.|+|.++||+|||++++||++|++.+.|.++..++|.++|||++|+|+++|+++++|+
T Consensus 1 MMkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~ 80 (325)
T 3jyn_A 1 MAKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVEAVGDEVTRFK 80 (325)
T ss_dssp CEEEEEBSSCSSGGGCEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred CcEEEEEecCCCcceeEEeecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCceeEEEEEEECCCCCCCC
Confidence 7999999999987 99999999999999999999999999999999999887667899999999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||||+.... .+| +|+||+.++++.++++|++
T Consensus 81 ~GdrV~~~~~------------------------------~~G------------------~~aey~~v~~~~~~~~P~~ 112 (325)
T 3jyn_A 81 VGDRVAYGTG------------------------------PLG------------------AYSEVHVLPEANLVKLADS 112 (325)
T ss_dssp TTCEEEESSS------------------------------SSC------------------CSBSEEEEEGGGEEECCTT
T ss_pred CCCEEEEecC------------------------------CCc------------------cccceEEecHHHeEECCCC
Confidence 9999975321 233 9999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
+++++||++++.++|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++++|++++++
T Consensus 113 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~ 191 (325)
T 3jyn_A 113 VSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGAWETID 191 (325)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred CCHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999999988899999999999985 9999999999999999 9999999999999999999999999
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheee--ceEEEeeec
Q 017431 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT--GRVWKGTAF 314 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~--~~~~~g~~~ 314 (371)
+.+ .++.+.+.+.+++ ++|++|||+|+ ..++.++++++++ |+++.+|..... ...++...+.. .+.+.+..+
T Consensus 192 ~~~--~~~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 266 (325)
T 3jyn_A 192 YSH--EDVAKRVLELTDGKKCPVVYDGVGQ-DTWLTSLDSVAPR-GLVVSFGNASGP-VSGVNLGILAQKDSVYVTRPTL 266 (325)
T ss_dssp TTT--SCHHHHHHHHTTTCCEEEEEESSCG-GGHHHHHTTEEEE-EEEEECCCTTCC-CCSCCTHHHHHTTSCEEECCCH
T ss_pred CCC--ccHHHHHHHHhCCCCceEEEECCCh-HHHHHHHHHhcCC-CEEEEEecCCCC-CCCCCHHHHhhcCcEEEEeeee
Confidence 887 7788999999988 99999999999 6699999999996 999999975432 12333333222 345544332
Q ss_pred CCC-cccCc----HHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 315 GGF-KSRSQ----VPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 315 ~~~-~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
..+ ...++ +++++++++++++++. ++++|+++++++|++.+.+++.. |+||++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~l~~~~~A~~~~~~~~~~Gkvvl~p 325 (325)
T 3jyn_A 267 GSYANNAQNLQTMADELFDMLASGKLKVD--GIEQYALKDAAKAQIELSARRTTGSTILIP 325 (325)
T ss_dssp HHHSCSTTHHHHHHHHHHHHHHTTSSCCC--CCEEEEGGGHHHHHHHHHTTCCCSCEEEEC
T ss_pred eeecCCHHHHHHHHHHHHHHHHCCCeeCc--cccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 222 12233 3478999999998865 68999999999999999998887 999864
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-51 Score=384.43 Aligned_cols=312 Identities=17% Similarity=0.210 Sum_probs=272.7
Q ss_pred CcceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCC-CCCcccccceeEEEEEeCCCCCCC
Q 017431 1 MCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVTEV 77 (371)
Q Consensus 1 ~~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~-~~p~v~G~e~~G~V~~~G~~v~~~ 77 (371)
||||+++.+++.| ++++++|.|+|.++||+|||.+++||++|++.+.|.++.. .+|.++|||++|+|+++|+++++|
T Consensus 28 ~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~v~~~ 107 (353)
T 4dup_A 28 EMRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGEIVGVGPGVSGY 107 (353)
T ss_dssp SEEEEEESSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCCCTTSCSSSCCEEEEEEEEECTTCCSC
T ss_pred heeEEEEccCCCccceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCccccccEEEEEEECCCCCCC
Confidence 5999999998876 9999999999999999999999999999999999987644 579999999999999999999999
Q ss_pred CCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCC
Q 017431 78 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 157 (371)
Q Consensus 78 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~ 157 (371)
++||||+... .+| +|+||+.+|++.++++|+
T Consensus 108 ~vGdrV~~~~-------------------------------~~G------------------~~aey~~v~~~~~~~~P~ 138 (353)
T 4dup_A 108 AVGDKVCGLA-------------------------------NGG------------------AYAEYCLLPAGQILPFPK 138 (353)
T ss_dssp CTTCEEEEEC-------------------------------SSC------------------CSBSEEEEEGGGEEECCT
T ss_pred CCCCEEEEec-------------------------------CCC------------------ceeeEEEEcHHHcEeCCC
Confidence 9999997432 233 999999999999999999
Q ss_pred CCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEe
Q 017431 158 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 236 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi 236 (371)
++++++||+++.+++|||+++.+..++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.++++++|++.++
T Consensus 139 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~ 217 (353)
T 4dup_A 139 GYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERLGAKRGI 217 (353)
T ss_dssp TCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEE
T ss_pred CCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEE
Confidence 99999999999999999999989999999999999955 9999999999999999 899999999999999999999999
Q ss_pred cCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCccc-ccchhee-eceEEEeeec
Q 017431 237 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS-TRPFQLV-TGRVWKGTAF 314 (371)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~-~~~~~~~-~~~~~~g~~~ 314 (371)
++.+ .++.+.+.+.+++++|++|||+|++ .++.++++++++ |+++.+|..... ... ++...+. +++++.|+.+
T Consensus 218 ~~~~--~~~~~~~~~~~~~g~Dvvid~~g~~-~~~~~~~~l~~~-G~iv~~g~~~~~-~~~~~~~~~~~~~~~~i~g~~~ 292 (353)
T 4dup_A 218 NYRS--EDFAAVIKAETGQGVDIILDMIGAA-YFERNIASLAKD-GCLSIIAFLGGA-VAEKVNLSPIMVKRLTVTGSTM 292 (353)
T ss_dssp ETTT--SCHHHHHHHHHSSCEEEEEESCCGG-GHHHHHHTEEEE-EEEEECCCTTCS-EEEEEECHHHHHTTCEEEECCS
T ss_pred eCCc--hHHHHHHHHHhCCCceEEEECCCHH-HHHHHHHHhccC-CEEEEEEecCCC-cccCCCHHHHHhcCceEEEEec
Confidence 9887 6788888888844999999999984 589999999996 999999875432 222 4444433 4889999877
Q ss_pred CCCcccC-------cHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 315 GGFKSRS-------QVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 315 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
..+...+ .++.+++++++++++ ++++++|+|+++++|++.+++++.. |+||++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~l~~~~~~gKvvl~~ 353 (353)
T 4dup_A 293 RPRTAEEKRAIRDDLLSEVWPLLEAGTVA--PVIHKVFAFEDVADAHRLLEEGSHVGKVMLTV 353 (353)
T ss_dssp TTSCHHHHHHHHHHHHHHTHHHHHHTSSC--CCEEEEEEGGGHHHHHHHHHHTCCSSEEEEEC
T ss_pred cccchhhhHHHHHHHHHHHHHHHHCCCcc--CCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 5543211 167889999999975 5688999999999999999998876 999975
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-51 Score=378.95 Aligned_cols=312 Identities=24% Similarity=0.307 Sum_probs=273.1
Q ss_pred CcceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 017431 1 MCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 1 ~~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
||||+++.+++++ +++++.|.|+|.++||+|||++++||++|++.+.|.++. ++|.++|||++|+|+++|+++++|+
T Consensus 8 ~mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~-~~P~i~G~e~~G~V~~vG~~v~~~~ 86 (334)
T 3qwb_A 8 QQKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYPC-EKPYVLGREASGTVVAKGKGVTNFE 86 (334)
T ss_dssp EEEEEEESSSSSGGGEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSCC-CSSEECCSEEEEEEEEECTTCCSCC
T ss_pred heEEEEEecCCCCceeEEEeccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC-CCCCccccceEEEEEEECCCCCCCC
Confidence 5999999999876 999999999999999999999999999999999998764 5899999999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEec-ccceEecCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVH-DVSVAKIDP 157 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~-~~~v~~lP~ 157 (371)
+||||+.. .+ |+|++|++++ .+.++++|+
T Consensus 87 ~GdrV~~~--------------------------------~~------------------G~~aey~~v~~~~~~~~~P~ 116 (334)
T 3qwb_A 87 VGDQVAYI--------------------------------SN------------------STFAQYSKISSQGPVMKLPK 116 (334)
T ss_dssp TTCEEEEE--------------------------------CS------------------SCSBSEEEEETTSSEEECCT
T ss_pred CCCEEEEe--------------------------------eC------------------CcceEEEEecCcceEEECCC
Confidence 99999743 12 3999999999 999999999
Q ss_pred CCCcch---hhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCc
Q 017431 158 QAPLDK---VCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 233 (371)
Q Consensus 158 ~~~~~~---aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~ 233 (371)
++++++ ||++++.++|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++++++++++|++
T Consensus 117 ~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~ 195 (334)
T 3qwb_A 117 GTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKEYGAE 195 (334)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCS
T ss_pred CCCHHHhhhhhhhhhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCc
Confidence 999999 88888999999999988889999999999985 9999999999999999 899999999999999999999
Q ss_pred EEecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEe
Q 017431 234 EFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKG 311 (371)
Q Consensus 234 ~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g 311 (371)
.++++.+ .++.+.+.+.+++ ++|++|||+|+ ..++.++++++++ |+++.+|.... ....++...+. +++++.+
T Consensus 196 ~~~~~~~--~~~~~~~~~~~~~~g~D~vid~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~~~~ 270 (334)
T 3qwb_A 196 YLINASK--EDILRQVLKFTNGKGVDASFDSVGK-DTFEISLAALKRK-GVFVSFGNASG-LIPPFSITRLSPKNITLVR 270 (334)
T ss_dssp EEEETTT--SCHHHHHHHHTTTSCEEEEEECCGG-GGHHHHHHHEEEE-EEEEECCCTTC-CCCCBCGGGGTTTTCEEEC
T ss_pred EEEeCCC--chHHHHHHHHhCCCCceEEEECCCh-HHHHHHHHHhccC-CEEEEEcCCCC-CCCCcchhhhhhCceEEEE
Confidence 9999887 7788899999988 99999999998 6699999999996 99999997542 22233333333 4788887
Q ss_pred eecCCCc-ccC----cHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecCC
Q 017431 312 TAFGGFK-SRS----QVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQD 371 (371)
Q Consensus 312 ~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~d 371 (371)
+.+..+. ..+ .+++++++++++++++. ++++|+++++++|++.+.+++.. |+||++++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~q 334 (334)
T 3qwb_A 271 PQLYGYIADPEEWKYYSDEFFGLVNSKKLNIK--IYKTYPLRDYRTAAADIESRKTVGKLVLEIPQ 334 (334)
T ss_dssp CCGGGGSCSHHHHHHHHHHHHHHHHTTSSCCC--EEEEEEGGGHHHHHHHHHTTCCCBEEEEECCC
T ss_pred EEeccccCCHHHHHHHHHHHHHHHHCCCccCc--eeeEEcHHHHHHHHHHHHhCCCceEEEEecCC
Confidence 6654432 122 34689999999998764 78999999999999999998876 99999875
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-51 Score=382.05 Aligned_cols=315 Identities=17% Similarity=0.222 Sum_probs=268.8
Q ss_pred CcceEEeecCCCC---eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCC
Q 017431 1 MCKAAVAWEPNKP---LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTE 76 (371)
Q Consensus 1 ~~~a~~~~~~~~~---~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~ 76 (371)
+|||+++.++++| ++++++|.|+|.++||+|||++++||++|++.+.|.++. .++|.++|||++|+|+++|+++++
T Consensus 4 ~mka~~~~~~g~p~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~v~~ 83 (340)
T 3gms_A 4 HGKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVGIVENVGAFVSR 83 (340)
T ss_dssp EEEEEEESSCSCHHHHEEEEEEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTTTSCSSBCCCSCCEEEEEEECTTSCG
T ss_pred ccEEEEEecCCCchheEEEEecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCCCCCCCCcCCcceEEEEEEeCCCCCC
Confidence 4899999999998 999999999999999999999999999999999998764 378999999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecC
Q 017431 77 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 156 (371)
Q Consensus 77 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP 156 (371)
|++||||+... .+ |+|+||+++|++.++++|
T Consensus 84 ~~vGdrV~~~~-------------------------------~~------------------G~~aey~~v~~~~~~~vP 114 (340)
T 3gms_A 84 ELIGKRVLPLR-------------------------------GE------------------GTWQEYVKTSADFVVPIP 114 (340)
T ss_dssp GGTTCEEEECS-------------------------------SS------------------CSSBSEEEEEGGGEEECC
T ss_pred CCCCCEEEecC-------------------------------CC------------------ccceeEEEcCHHHeEECC
Confidence 99999997421 22 399999999999999999
Q ss_pred CCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE
Q 017431 157 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 235 (371)
Q Consensus 157 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v 235 (371)
+++++++||++++.++|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++++|++++
T Consensus 115 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lga~~~ 193 (340)
T 3gms_A 115 DSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLGAAYV 193 (340)
T ss_dssp TTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEE
T ss_pred CCCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhCCCcEE
Confidence 999999999999999999999999999999999999998 5999999999999999 99999999999999999999999
Q ss_pred ecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeec
Q 017431 236 VNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAF 314 (371)
Q Consensus 236 i~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~ 314 (371)
+++.+ .++.+.+.+.+++ ++|++|||+|++. ...++++++++ |+++.+|.... ...++........+.+..+.+
T Consensus 194 ~~~~~--~~~~~~~~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~~~~~~ 268 (340)
T 3gms_A 194 IDTST--APLYETVMELTNGIGADAAIDSIGGPD-GNELAFSLRPN-GHFLTIGLLSG-IQVNWAEIVTKAKVHANIFHL 268 (340)
T ss_dssp EETTT--SCHHHHHHHHTTTSCEEEEEESSCHHH-HHHHHHTEEEE-EEEEECCCTTS-CCCCHHHHHHTSCCEEEECCH
T ss_pred EeCCc--ccHHHHHHHHhCCCCCcEEEECCCChh-HHHHHHHhcCC-CEEEEEeecCC-CCCCHHHhhhcccceEEEEEe
Confidence 99877 7788899999988 9999999999965 56677999996 99999987532 222222111011333333322
Q ss_pred CCC-------cccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCC-e-eEEEEecCC
Q 017431 315 GGF-------KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD-C-LRCVLKMQD 371 (371)
Q Consensus 315 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~-~-~kvvl~~~d 371 (371)
..+ ...+++++++++++++++++.+ ++++|+|+++++|++.+.+++ . .|++|++.|
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~-i~~~~~l~~~~~A~~~~~~~~~~~GKvvl~~~~ 333 (340)
T 3gms_A 269 RHWNDEVSPYKWQETFRHLIRLVENEQLRFMK-VHSTYELADVKAAVDVVQSAEKTKGKVFLTSYE 333 (340)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCC-EEEEEEGGGHHHHHHHHHCTTCCSSEEEEECC-
T ss_pred hhhhhhcCHHHHHHHHHHHHHHHHcCCCcccc-ccEEEeHHHHHHHHHHHHhcCCCCCeEEEEEec
Confidence 111 1235788999999999998765 689999999999999999987 4 499999864
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-51 Score=397.91 Aligned_cols=339 Identities=19% Similarity=0.203 Sum_probs=283.6
Q ss_pred CcceEEeecC---------------CCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCC-------------CC-
Q 017431 1 MCKAAVAWEP---------------NKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK-------------DP- 51 (371)
Q Consensus 1 ~~~a~~~~~~---------------~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~-------------~~- 51 (371)
||||+++.++ +++++++++|.|+|.++||+|||.+++||++|++...+. ..
T Consensus 30 tmkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~~g~~~~ 109 (456)
T 3krt_A 30 SYRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSD 109 (456)
T ss_dssp CEEEEEEEGGGTTTTTTCCGGGCCHHHHCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHHHHTSCH
T ss_pred ceEEEEEeccccccccccccccCCCCCCcEEEEccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhhcccccc
Confidence 6999999987 244999999999999999999999999999998764321 10
Q ss_pred ---CCCCC-cccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCcccccc
Q 017431 52 ---EGLFP-CILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSI 127 (371)
Q Consensus 52 ---~~~~p-~v~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~ 127 (371)
...+| .++|||++|+|+++|+++++|++||||++.+. .|..|..|..+..+.|..... +|+...+
T Consensus 110 ~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~-~c~~~~~~~~~~~~~c~~~~~---~G~~~~~------- 178 (456)
T 3krt_A 110 LAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCL-SVELESSDGHNDTMLDPEQRI---WGFETNF------- 178 (456)
T ss_dssp HHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCE-ECCCCSGGGTTSGGGCTTCEE---TTTTSSS-------
T ss_pred ccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCC-cccccccccccccccCccccc---cccCCCC-------
Confidence 12467 68999999999999999999999999998643 678888888899999976653 3322122
Q ss_pred CCcceeeccCCcceeeeEEecccceEecCCCCCcchhhhccccchhhhhhhhhc--CCCCCCCEEEEEcC-ChHHHHHHH
Q 017431 128 NGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT--AKVEPGSIVAVFGL-GTVGLAVAE 204 (371)
Q Consensus 128 ~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~~g~~VlI~Ga-g~vG~~ai~ 204 (371)
|+|+||++++++.++++|+++++++||+++++++|||+++... .++++|++|||+|+ |++|++++|
T Consensus 179 -----------G~~aey~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avq 247 (456)
T 3krt_A 179 -----------GGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQ 247 (456)
T ss_dssp -----------CSSBSEEEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHH
T ss_pred -----------CcccceEEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHH
Confidence 4999999999999999999999999999999999999998655 78999999999998 999999999
Q ss_pred HHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCc---------------hHHHHHHhhcCC-CccEEEEccCCHH
Q 017431 205 GAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDK---------------PIQQVLVDLTDG-GVDYSFECIGNVS 268 (371)
Q Consensus 205 la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~---------------~~~~~~~~~~~g-g~dvvid~~g~~~ 268 (371)
+|+.+|+ +|+++++++++.++++++|++.++++.+.+. .+.+.+++++++ ++|++|||+|+ .
T Consensus 248 lak~~Ga-~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~-~ 325 (456)
T 3krt_A 248 FALAGGA-NPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGR-E 325 (456)
T ss_dssp HHHHTTC-EEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCH-H
T ss_pred HHHHcCC-eEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCc-h
Confidence 9999999 8888889999999999999999998876321 245788888888 99999999999 7
Q ss_pred HHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeec
Q 017431 269 VMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTL 347 (371)
Q Consensus 269 ~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 347 (371)
.+..++++++++ |+++.+|... +...+++...+. +++++.|+....+ .++..+++++++++++ ++++++|+|
T Consensus 326 ~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l~--~~i~~~~~l 398 (456)
T 3krt_A 326 TFGASVFVTRKG-GTITTCASTS-GYMHEYDNRYLWMSLKRIIGSHFANY---REAWEANRLIAKGRIH--PTLSKVYSL 398 (456)
T ss_dssp HHHHHHHHEEEE-EEEEESCCTT-CSEEEEEHHHHHHTTCEEEECCSCCH---HHHHHHHHHHHTTSSC--CCEEEEEEG
T ss_pred hHHHHHHHhhCC-cEEEEEecCC-CcccccCHHHHHhcCeEEEEeccCCH---HHHHHHHHHHHcCCcc--cceeEEEcH
Confidence 799999999996 9999998753 233344433333 3778888876543 4677899999999976 568899999
Q ss_pred ccHHHHHHHHhCCCee-EEEEecC
Q 017431 348 GEINEAFRYMHGGDCL-RCVLKMQ 370 (371)
Q Consensus 348 ~~~~~A~~~~~~~~~~-kvvl~~~ 370 (371)
+++++|++.+.+++.. |+||.+.
T Consensus 399 ~~~~eA~~~l~~~~~~GKvvv~~~ 422 (456)
T 3krt_A 399 EDTGQAAYDVHRNLHQGKVGVLCL 422 (456)
T ss_dssp GGHHHHHHHHHTTCSSSEEEEESS
T ss_pred HHHHHHHHHHHhCCCCCcEEEEeC
Confidence 9999999999988876 9988864
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-52 Score=394.78 Aligned_cols=333 Identities=17% Similarity=0.225 Sum_probs=275.2
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCC-CeEEEEEeeeecCccccccccC--CCCCCCC---CcccccceeEEEEEeCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQA-GEVRIKILFTALCHTDAYTWSG--KDPEGLF---PCILGHEAAGIVESVGEGVT 75 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~-~eVlV~v~~~~i~~~D~~~~~g--~~~~~~~---p~v~G~e~~G~V~~~G~~v~ 75 (371)
|||+++.+++++++++++|.|+|.+ +||+|||++++||++|++.+.| .++..++ |.++|||++|+|++ ++ +
T Consensus 1 MkA~~~~~~g~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~--~~-~ 77 (366)
T 2cdc_A 1 MKAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIGVVEE--SY-H 77 (366)
T ss_dssp CEEEEECTTSCCCEEEECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC-------CCSCEECCSEEEEEECS--CC-S
T ss_pred CeEEEEeCCCCceEEEECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCCCCCcCCCCCcCCcceEEEEEe--CC-C
Confidence 8999999998779999999999999 9999999999999999999998 5543456 99999999999999 66 8
Q ss_pred CCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEec
Q 017431 76 EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI 155 (371)
Q Consensus 76 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~l 155 (371)
+|++||||++.+..+|+.|.+|+.+.+++|.+.... ..|....+ |+|+||++++++.++++
T Consensus 78 ~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~-~~g~~~~~------------------G~~aey~~v~~~~~~~i 138 (366)
T 2cdc_A 78 GFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFG-EAGIHKMD------------------GFMREWWYDDPKYLVKI 138 (366)
T ss_dssp SCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCE-EETTBEEC------------------CSCBSEEEECGGGEEEE
T ss_pred CCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcc-cCCccCCC------------------CceeEEEEechHHeEEC
Confidence 899999999999999999999999999999865421 00211012 49999999999999999
Q ss_pred CCCCCcchhhhccccchhhhhhhh--h--cCCCC--C-------CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh-
Q 017431 156 DPQAPLDKVCLLGCGVPTGLGAVW--N--TAKVE--P-------GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP- 221 (371)
Q Consensus 156 P~~~~~~~aa~~~~~~~ta~~~l~--~--~~~~~--~-------g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~- 221 (371)
|++++ ++|| ++.++.|||+++. + ..+++ + |++|||+|+|++|++++|+|+.+|+ +|+++++++
T Consensus 139 P~~l~-~~Aa-l~~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~ 215 (366)
T 2cdc_A 139 PKSIE-DIGI-LAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREP 215 (366)
T ss_dssp CGGGT-TTGG-GHHHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCC
T ss_pred cCCcc-hhhh-hcCcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCcc
Confidence 99999 7765 6679999999986 4 77888 8 9999999999999999999999999 999999998
Q ss_pred --hhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHH-HHHHHHhccCCceEEEEccCCCCCcccc
Q 017431 222 --KKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVM-RAALECCHKGWGTSVIVGVAASGQEIST 298 (371)
Q Consensus 222 --~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~-~~~~~~l~~~~G~iv~~g~~~~~~~~~~ 298 (371)
++.++++++|++.+ + .+ ++.+.+.+ +++++|++||++|.+..+ +.++++|+++ |+++.+|.... ...++
T Consensus 216 ~~~~~~~~~~~ga~~v-~-~~---~~~~~~~~-~~~~~d~vid~~g~~~~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~ 287 (366)
T 2cdc_A 216 TEVEQTVIEETKTNYY-N-SS---NGYDKLKD-SVGKFDVIIDATGADVNILGNVIPLLGRN-GVLGLFGFSTS-GSVPL 287 (366)
T ss_dssp CHHHHHHHHHHTCEEE-E-CT---TCSHHHHH-HHCCEEEEEECCCCCTHHHHHHGGGEEEE-EEEEECSCCCS-CEEEE
T ss_pred chHHHHHHHHhCCcee-c-hH---HHHHHHHH-hCCCCCEEEECCCChHHHHHHHHHHHhcC-CEEEEEecCCC-Ccccc
Confidence 89999999999887 6 43 45555665 446899999999997678 9999999996 99999987543 22344
Q ss_pred cchh---e-eeceEEEeeecCCCcccCcHHHHHHHHHcCCCC----CCCceeeeeecccHHHHHHH--HhCCCeeEEEEe
Q 017431 299 RPFQ---L-VTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIK----VDEYVTHNMTLGEINEAFRY--MHGGDCLRCVLK 368 (371)
Q Consensus 299 ~~~~---~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~A~~~--~~~~~~~kvvl~ 368 (371)
+... + .+++++.|+... ..++++++++++++++++ +.++++++|+|+++++|++. ++++...|+||+
T Consensus 288 ~~~~~~~~~~~~~~i~g~~~~---~~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~~~l~~~~~~~gKvvi~ 364 (366)
T 2cdc_A 288 DYKTLQEIVHTNKTIIGLVNG---QKPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKEHGEIKIRIL 364 (366)
T ss_dssp EHHHHHHHHHTTCEEEECCCC---CHHHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHHHHHHCCCTTCCEEEEE
T ss_pred ChhhhHHHHhcCcEEEEecCC---CHHHHHHHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHHHHHhhhcCCceEEEEe
Confidence 4443 3 348888887543 246799999999999977 67888999999999999999 564444499998
Q ss_pred cC
Q 017431 369 MQ 370 (371)
Q Consensus 369 ~~ 370 (371)
++
T Consensus 365 ~~ 366 (366)
T 2cdc_A 365 WE 366 (366)
T ss_dssp CC
T ss_pred cC
Confidence 75
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-50 Score=383.04 Aligned_cols=321 Identities=18% Similarity=0.198 Sum_probs=263.5
Q ss_pred CcceEEeecCCCCeEEE-EeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIE-DVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 79 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~-~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~ 79 (371)
||||+++.+++. ++++ ++|.|+|.++||+|||++++||++|++.+.+. ..+|.++|||++|+|+++|+++++|++
T Consensus 11 ~mkA~v~~~~~~-l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~---~~~p~v~G~e~~G~V~~vG~~v~~~~~ 86 (371)
T 3gqv_A 11 QQTALTVNDHDE-VTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQF---ATPWAFLGTDYAGTVVAVGSDVTHIQV 86 (371)
T ss_dssp CEEEEEECTTSC-EEEEEEECCCCCCTTSEEEEEEEEECCGGGGC--------CCTTSCCCSEEEEEEEEECTTCCSCCT
T ss_pred hceeEEEcCCCc-eEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcC---CCCCccCccccEEEEEEeCCCCCCCCC
Confidence 599999999976 9999 99999999999999999999999999988763 246899999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCC
Q 017431 80 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 159 (371)
Q Consensus 80 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~ 159 (371)
||||+. .|..|..+.. .+| +|+||++++++.++++|+++
T Consensus 87 GdrV~~-------~~~~~~~~~~----------------~~G------------------~~aey~~v~~~~~~~~P~~~ 125 (371)
T 3gqv_A 87 GDRVYG-------AQNEMCPRTP----------------DQG------------------AFSQYTVTRGRVWAKIPKGL 125 (371)
T ss_dssp TCEEEE-------ECCTTCTTCT----------------TCC------------------SSBSEEECCTTCEEECCTTC
T ss_pred CCEEEE-------eccCCCCCCC----------------CCC------------------cCcCeEEEchhheEECCCCC
Confidence 999964 3444433210 333 99999999999999999999
Q ss_pred Ccchhhhccccchhhhhhhhhc-CCC-----------CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHH
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNT-AKV-----------EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR 226 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~-~~~-----------~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~ 226 (371)
++++||++++++.|||+++.+. .++ ++|++|||+|+ |++|++++|+|+.+|+ +|+++. +++|+++
T Consensus 126 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~~~~~~~ 203 (371)
T 3gqv_A 126 SFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATC-SPHNFDL 203 (371)
T ss_dssp CHHHHHTSHHHHHHHHHHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHH
T ss_pred CHHHHhhhhhhHHHHHHHHHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-CHHHHHH
Confidence 9999999999999999998776 543 89999999998 9999999999999999 888885 7889999
Q ss_pred HHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHh-ccCCceEEEEccCCC----CCccccc--
Q 017431 227 AKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECC-HKGWGTSVIVGVAAS----GQEISTR-- 299 (371)
Q Consensus 227 ~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l-~~~~G~iv~~g~~~~----~~~~~~~-- 299 (371)
++++|+++++++.+ .++.+.+++++++++|++|||+|++.+++.+++++ +++ |+++.+|.... ...++..
T Consensus 204 ~~~lGa~~vi~~~~--~~~~~~v~~~t~g~~d~v~d~~g~~~~~~~~~~~l~~~~-G~iv~~g~~~~~~~~~~~~~~~~~ 280 (371)
T 3gqv_A 204 AKSRGAEEVFDYRA--PNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAG-GHYVSLNPFPEHAATRKMVTTDWT 280 (371)
T ss_dssp HHHTTCSEEEETTS--TTHHHHHHHHTTTCCCEEEESSCSHHHHHHHHHHSCTTC-EEEEESSCCCC---CCSCEEEEEC
T ss_pred HHHcCCcEEEECCC--chHHHHHHHHccCCccEEEECCCchHHHHHHHHHhhcCC-CEEEEEecCccccccccccceeee
Confidence 99999999999987 78899999999889999999999988899999999 586 99999986432 1112211
Q ss_pred -chhe-eeceEEEeeecCCCcc------cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee--EEEEec
Q 017431 300 -PFQL-VTGRVWKGTAFGGFKS------RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL--RCVLKM 369 (371)
Q Consensus 300 -~~~~-~~~~~~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~--kvvl~~ 369 (371)
...+ .+++++.|+....... .+.++.++++++++++++.+.+++.|+|+++++|++.+.+++.. |+|+++
T Consensus 281 ~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkvvv~~ 360 (371)
T 3gqv_A 281 LGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVRL 360 (371)
T ss_dssp CGGGGGTSCBSCSTTTCBCCCHHHHHHHHHHHHHHHHHHHTTSSCCCCEEEEEECHHHHHHHHHHHHTTCCSSCEEEEEE
T ss_pred eeeeeccccccccccccccccHHHHHHHHHHHHHHHHHHHCCeeeCCcCeecCCcHHHHHHHHHHHHcCCCceEEEEEEe
Confidence 1122 2466776664322110 11234788999999999988888889999999999999988763 788887
Q ss_pred CC
Q 017431 370 QD 371 (371)
Q Consensus 370 ~d 371 (371)
+|
T Consensus 361 ~~ 362 (371)
T 3gqv_A 361 EG 362 (371)
T ss_dssp CC
T ss_pred CC
Confidence 64
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-51 Score=396.64 Aligned_cols=339 Identities=17% Similarity=0.212 Sum_probs=279.6
Q ss_pred CcceEEeecCC-------------CCeEEEEeeCCCCCCCeEEEEEeeeecCcccccccc----------------CCCC
Q 017431 1 MCKAAVAWEPN-------------KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWS----------------GKDP 51 (371)
Q Consensus 1 ~~~a~~~~~~~-------------~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~----------------g~~~ 51 (371)
||||+++.+++ ++++++++|.|+|.++||+|||++++||++|++... |.+.
T Consensus 24 tmkA~v~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~~~g~~~ 103 (447)
T 4a0s_A 24 TYLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWA 103 (447)
T ss_dssp EEEEEEEEGGGTTTTTTCSSCCHHHHCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHHTTCGGG
T ss_pred hheeeeeeccccccccccccCCCCCCceEEeccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhcccCccc
Confidence 59999999998 349999999999999999999999999999975422 2222
Q ss_pred C-CCCC-cccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCC
Q 017431 52 E-GLFP-CILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSING 129 (371)
Q Consensus 52 ~-~~~p-~v~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~ 129 (371)
. ..+| .++|||++|+|+++|++|++|++||||++.+...|+.|. |..+..+.|.+... +|+...+
T Consensus 104 ~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~-~~~~~~~~c~~~~~---~G~~~~~--------- 170 (447)
T 4a0s_A 104 TRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEP-ATHGDGMLGTEQRA---WGFETNF--------- 170 (447)
T ss_dssp GGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSG-GGGTCTTCSTTCEE---TTTTSSS---------
T ss_pred cccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCccc-cccccccccccccc---ccccCCC---------
Confidence 1 1467 699999999999999999999999999999888787776 45577888876553 3332112
Q ss_pred cceeeccCCcceeeeEEecccceEecCCCCCcchhhhccccchhhhhhhhh--cCCCCCCCEEEEEcC-ChHHHHHHHHH
Q 017431 130 KPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN--TAKVEPGSIVAVFGL-GTVGLAVAEGA 206 (371)
Q Consensus 130 ~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~~g~~VlI~Ga-g~vG~~ai~la 206 (371)
|+|+||++++++.++++|+++++++||+++++++|||+++.. ..++++|++|||+|+ |++|++++|+|
T Consensus 171 ---------G~~aey~~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla 241 (447)
T 4a0s_A 171 ---------GGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFV 241 (447)
T ss_dssp ---------CSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHH
T ss_pred ---------CceeeeeecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 499999999999999999999999999999999999999864 489999999999998 99999999999
Q ss_pred HHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCC----------------chHHHHHHhhcCCCccEEEEccCCHHHH
Q 017431 207 KAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD----------------KPIQQVLVDLTDGGVDYSFECIGNVSVM 270 (371)
Q Consensus 207 ~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~----------------~~~~~~~~~~~~gg~dvvid~~g~~~~~ 270 (371)
+.+|+ +|++++++++++++++++|+++++++.+.+ ..+.+.+++.+++++|++||++|. ..+
T Consensus 242 ~~~Ga-~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~-~~~ 319 (447)
T 4a0s_A 242 KNGGG-IPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGR-VTF 319 (447)
T ss_dssp HHTTC-EEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCH-HHH
T ss_pred HHcCC-EEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHHHHHhCCCceEEEECCCc-hHH
Confidence 99999 888888999999999999999988764411 113667888884499999999998 569
Q ss_pred HHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeeccc
Q 017431 271 RAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGE 349 (371)
Q Consensus 271 ~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 349 (371)
+.++++++++ |+++.+|.... ....++...+. +++++.|+..... +++.++++++++++++ ++++++|+|++
T Consensus 320 ~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l~--~~i~~~~~l~~ 392 (447)
T 4a0s_A 320 GLSVIVARRG-GTVVTCGSSSG-YLHTFDNRYLWMKLKKIVGSHGANH---EEQQATNRLFESGAVV--PAMSAVYPLAE 392 (447)
T ss_dssp HHHHHHSCTT-CEEEESCCTTC-SEEEEEHHHHHHTTCEEEECCSCCH---HHHHHHHHHHHTTSSC--CCEEEEEEGGG
T ss_pred HHHHHHHhcC-CEEEEEecCCC-cccccCHHHHHhCCCEEEecCCCCH---HHHHHHHHHHHcCCcc--cceeEEEcHHH
Confidence 9999999996 99999987532 23344433333 3778888765432 5688899999999975 56889999999
Q ss_pred HHHHHHHHhCCCee-EEEEecC
Q 017431 350 INEAFRYMHGGDCL-RCVLKMQ 370 (371)
Q Consensus 350 ~~~A~~~~~~~~~~-kvvl~~~ 370 (371)
+++|++.+.+++.. |+||.+.
T Consensus 393 ~~~A~~~~~~~~~~GKvvv~~~ 414 (447)
T 4a0s_A 393 AAEACRVVQTSRQVGKVAVLCM 414 (447)
T ss_dssp HHHHHHHHHTTCCSSEEEEESS
T ss_pred HHHHHHHHhcCCCceEEEEEeC
Confidence 99999999988876 9988874
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-50 Score=379.02 Aligned_cols=309 Identities=24% Similarity=0.277 Sum_probs=264.3
Q ss_pred CcceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCC
Q 017431 1 MCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEV 77 (371)
Q Consensus 1 ~~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~ 77 (371)
||||+++.++++| ++++++|.|+|.++||+|||++++||++|++.+.|.++. .++|.++|||++|+|+++|++++ |
T Consensus 21 ~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~-~ 99 (342)
T 4eye_A 21 SMKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAGVVRSAPEGSG-I 99 (342)
T ss_dssp EEEEEEECSSSGGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSSSCCCSSBCCCSEEEEEEEECCTTSS-C
T ss_pred ceEEEEEecCCCCceeEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCccceeEEEEEEEECCCCC-C
Confidence 5999999998877 999999999999999999999999999999999998754 36899999999999999999999 9
Q ss_pred CCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCC
Q 017431 78 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 157 (371)
Q Consensus 78 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~ 157 (371)
++||||+... .+| +|+||+.++++.++++|+
T Consensus 100 ~vGDrV~~~~-------------------------------~~G------------------~~aey~~v~~~~~~~iP~ 130 (342)
T 4eye_A 100 KPGDRVMAFN-------------------------------FIG------------------GYAERVAVAPSNILPTPP 130 (342)
T ss_dssp CTTCEEEEEC-------------------------------SSC------------------CSBSEEEECGGGEEECCT
T ss_pred CCCCEEEEec-------------------------------CCC------------------cceEEEEEcHHHeEECCC
Confidence 9999998542 233 999999999999999999
Q ss_pred CCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEe
Q 017431 158 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 236 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi 236 (371)
++++++||+++.+++|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++++|++.++
T Consensus 131 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~v~ 209 (342)
T 4eye_A 131 QLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVGADIVL 209 (342)
T ss_dssp TSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEE
T ss_pred CCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEe
Confidence 99999999999999999999989999999999999998 9999999999999999 999999999999999999999998
Q ss_pred cCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeeec
Q 017431 237 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAF 314 (371)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~ 314 (371)
++. .++.+.+++.+++ ++|++|||+|++ .++.++++++++ |+++.+|..... ...++...+ .+++++.|+..
T Consensus 210 ~~~---~~~~~~v~~~~~~~g~Dvvid~~g~~-~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~ 283 (342)
T 4eye_A 210 PLE---EGWAKAVREATGGAGVDMVVDPIGGP-AFDDAVRTLASE-GRLLVVGFAAGG-IPTIKVNRLLLRNASLIGVAW 283 (342)
T ss_dssp ESS---TTHHHHHHHHTTTSCEEEEEESCC---CHHHHHHTEEEE-EEEEEC-----------CCCCGGGTTCEEEECCH
T ss_pred cCc---hhHHHHHHHHhCCCCceEEEECCchh-HHHHHHHhhcCC-CEEEEEEccCCC-CCccCHHHHhhcCCEEEEEeh
Confidence 876 4678889999988 999999999994 599999999996 999999875422 223333333 34888988875
Q ss_pred CCCc------ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 315 GGFK------SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 315 ~~~~------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
..+. ..++++.++++++++ + .++++++|+|+++++|++.+.+++.. |+||++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~l~~~g-l--~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~P 342 (342)
T 4eye_A 284 GEFLRTHADYLYETQAGLEKLVAEG-M--RPPVSARIPLSEGRQALQDFADGKVYGKMVLVP 342 (342)
T ss_dssp HHHHHHCTTHHHHHHHHHHHHHHTT-C--CCCEEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred hhhhhcCHHHHHHHHHHHHHHHHcC-C--CCCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 4321 124578899999999 4 46788999999999999999998886 999874
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-49 Score=372.83 Aligned_cols=312 Identities=18% Similarity=0.197 Sum_probs=264.3
Q ss_pred CcceEEeecCC-----CCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCC
Q 017431 1 MCKAAVAWEPN-----KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVT 75 (371)
Q Consensus 1 ~~~a~~~~~~~-----~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~ 75 (371)
||||+++.++| +.++++++|.|+|.++||+|||++++||++|++.+.|. ...+|.++|||++|+|+++|++++
T Consensus 2 ~MkA~~~~~~G~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~--~~~~p~i~G~e~~G~V~~vG~~v~ 79 (346)
T 3fbg_A 2 SLKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMD--VSKAPRVLGFDAIGVVESVGNEVT 79 (346)
T ss_dssp CEEEEEBSSCCCGGGCCCCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHTTSC--CSSSCBCCCCCEEEEEEEECTTCC
T ss_pred CcEEEEEEeccccCCCceeEeccccCCCCCCCEEEEEEEEEEcCHHHHHHHhCC--CCCCCcCcCCccEEEEEEeCCCCC
Confidence 69999999987 34999999999999999999999999999999999887 346899999999999999999999
Q ss_pred CCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEec
Q 017431 76 EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI 155 (371)
Q Consensus 76 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~l 155 (371)
+|++||||+..... ..+| +|+||+.++++.++++
T Consensus 80 ~~~~GdrV~~~~~~----------------------------~~~G------------------~~aey~~v~~~~~~~i 113 (346)
T 3fbg_A 80 MFNQGDIVYYSGSP----------------------------DQNG------------------SNAEYQLINERLVAKA 113 (346)
T ss_dssp SCCTTCEEEECCCT----------------------------TSCC------------------SSBSEEEEEGGGEEEC
T ss_pred cCCCCCEEEEcCCC----------------------------CCCc------------------ceeEEEEEChHHeEEC
Confidence 99999999853210 0233 9999999999999999
Q ss_pred CCCCCcchhhhccccchhhhhhhhhcCCCC------CCCEEEEEc-CChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 017431 156 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVE------PGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 228 (371)
Q Consensus 156 P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~------~g~~VlI~G-ag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~ 228 (371)
|+++++++||+++++++|||+++.+..+++ +|++|||+| +|++|++++|+|+.+|+ +|+++++++++.++++
T Consensus 114 P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~ 192 (346)
T 3fbg_A 114 PKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTK 192 (346)
T ss_dssp CSSSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHH
T ss_pred CCCCCHHHhhhcchhHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence 999999999999999999999998899998 999999995 59999999999999999 9999999999999999
Q ss_pred hcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-ece
Q 017431 229 NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGR 307 (371)
Q Consensus 229 ~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~ 307 (371)
++|+++++++.+ ++.+.+++..++++|++|||+|++..++.++++++++ |+++.++... . +++...+. +++
T Consensus 193 ~lGa~~vi~~~~---~~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~~l~~~-G~iv~~~~~~--~--~~~~~~~~~~~~ 264 (346)
T 3fbg_A 193 KMGADIVLNHKE---SLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPR-GHIATIVAFE--N--DQDLNALKPKSL 264 (346)
T ss_dssp HHTCSEEECTTS---CHHHHHHHHTCCCEEEEEESSCHHHHHHHHHHHEEEE-EEEEESSCCS--S--CBCGGGGTTTTC
T ss_pred hcCCcEEEECCc---cHHHHHHHhCCCCccEEEECCCchHHHHHHHHHhccC-CEEEEECCCC--C--CCccccccccce
Confidence 999999998864 5777788874349999999999987789999999996 9999887532 2 22222333 367
Q ss_pred EEEeeecCCCc---------ccCcHHHHHHHHHcCCCCCCCceeeee---ecccHHHHHHHHhCCCee-EEEEecCC
Q 017431 308 VWKGTAFGGFK---------SRSQVPWLVDKYMKKEIKVDEYVTHNM---TLGEINEAFRYMHGGDCL-RCVLKMQD 371 (371)
Q Consensus 308 ~~~g~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~~~A~~~~~~~~~~-kvvl~~~d 371 (371)
++.++.+.... ..+.++++++++++++++ +.++++| +++++++|++.+.+++.. |+||++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~~~~l~~~~~A~~~~~~g~~~GKvvl~~~~ 339 (346)
T 3fbg_A 265 SFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIYQ--PTTTKVIEGLTTENIYQAHQILESNTMIGKLVINLNE 339 (346)
T ss_dssp EEEECCTTHHHHTTCTTTHHHHHHHHHHHHHHHTTSSC--CCEEEEEESCCHHHHHHHHHHHHTTCCCSEEEEEC--
T ss_pred EEEEEEEecccccchhhHHHHHHHHHHHHHHHHCCCEE--CCccceecCCCHHHHHHHHHHHhcCCcceEEEEecCC
Confidence 77776543210 124578899999999976 4577777 899999999999999887 99999864
|
| >4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-50 Score=378.59 Aligned_cols=313 Identities=23% Similarity=0.301 Sum_probs=259.5
Q ss_pred CcceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCC
Q 017431 1 MCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEV 77 (371)
Q Consensus 1 ~~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~ 77 (371)
||||+++.+++.+ +++++.|.|+|.++||+|||++++||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|
T Consensus 3 ~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~ 82 (349)
T 4a27_A 3 EMRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGY 82 (349)
T ss_dssp CEEEEEECSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECTTCCSC
T ss_pred eeEEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcCCCCCCCccccceeEEEEEEeCCCCCCC
Confidence 6999999999964 999999999999999999999999999999999998754 3789999999999999999999999
Q ss_pred CCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCC
Q 017431 78 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 157 (371)
Q Consensus 78 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~ 157 (371)
++||||+... .+ |+|+||+.++++.++++|+
T Consensus 83 ~~GdrV~~~~-------------------------------~~------------------G~~aey~~v~~~~~~~iP~ 113 (349)
T 4a27_A 83 EIGDRVMAFV-------------------------------NY------------------NAWAEVVCTPVEFVYKIPD 113 (349)
T ss_dssp CTTCEEEEEC-------------------------------SS------------------CCSBSEEEEEGGGEEECCT
T ss_pred CCCCEEEEec-------------------------------CC------------------CcceEEEEecHHHeEECCC
Confidence 9999997532 22 3999999999999999999
Q ss_pred CCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEe
Q 017431 158 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 236 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi 236 (371)
++++++||+++++++|||+++.+..++++|++|||+|+ |++|++++|+|+.+|..+|++++ ++++.+.++ +|+++++
T Consensus 114 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga~~~~ 191 (349)
T 4a27_A 114 DMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSVTHLF 191 (349)
T ss_dssp TSCHHHHHTSHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGSSEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCCcEEE
Confidence 99999999999999999999989999999999999998 99999999999999755888887 567778888 9999999
Q ss_pred cCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCC--Cc-------------ccccch
Q 017431 237 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG--QE-------------ISTRPF 301 (371)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~--~~-------------~~~~~~ 301 (371)
+ .+ .++.+.+++.+++++|++|||+|++. ++.++++++++ |+++.+|..... .. ..+++.
T Consensus 192 ~-~~--~~~~~~~~~~~~~g~Dvv~d~~g~~~-~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (349)
T 4a27_A 192 D-RN--ADYVQEVKRISAEGVDIVLDCLCGDN-TGKGLSLLKPL-GTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPI 266 (349)
T ss_dssp E-TT--SCHHHHHHHHCTTCEEEEEEECC--------CTTEEEE-EEEEEEC-------------------------CHH
T ss_pred c-CC--ccHHHHHHHhcCCCceEEEECCCchh-HHHHHHHhhcC-CEEEEECCCcccccccccccccccccccccccCHH
Confidence 8 44 67888898888669999999999955 69999999996 999999874311 10 123333
Q ss_pred hee-eceEEEeeecCCCc--------ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecCC
Q 017431 302 QLV-TGRVWKGTAFGGFK--------SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQD 371 (371)
Q Consensus 302 ~~~-~~~~~~g~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~d 371 (371)
.+. ++.++.++.+..+. .+++++++++++++++++ ++++++|+|+++++|++.+.+++.. |+||++++
T Consensus 267 ~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~l~~~~~~GKvvi~~~~ 344 (349)
T 4a27_A 267 KLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIK--PVVDSLWALEEVKEAMQRIHDRGNIGKLILDVEK 344 (349)
T ss_dssp HHHHHTCEEEEECHHHHHHTSCCHHHHHHHHHHHHHHHHTTSCC--CCEEEEECGGGHHHHHHHHHTTCCSSEEEEETTC
T ss_pred HHhhcCceEEEEeehheeccccchHHHHHHHHHHHHHHHCCCcc--ccccceECHHHHHHHHHHHHhCCCCceEEEecCC
Confidence 333 37788887653211 145788999999999975 5688999999999999999998886 99999864
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-50 Score=373.04 Aligned_cols=315 Identities=27% Similarity=0.394 Sum_probs=266.0
Q ss_pred CcceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCC--CC-CCCCcccccceeEEEEEeCCCCC
Q 017431 1 MCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD--PE-GLFPCILGHEAAGIVESVGEGVT 75 (371)
Q Consensus 1 ~~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~--~~-~~~p~v~G~e~~G~V~~~G~~v~ 75 (371)
||||+++.+++.+ +++++.|.|+|.++||+|||++++||++|++.+.|.+ .. ..+|.++|||++|+|+++|++++
T Consensus 1 ~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~ 80 (333)
T 1wly_A 1 MVMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVT 80 (333)
T ss_dssp -CEEEEESSCSSGGGEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCC
T ss_pred CcEEEEEcccCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCC
Confidence 7999999998865 9999999999999999999999999999999999876 22 35799999999999999999999
Q ss_pred CCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEec
Q 017431 76 EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI 155 (371)
Q Consensus 76 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~l 155 (371)
+|++||||+..+. .+ |+|+||+++|++.++++
T Consensus 81 ~~~~GdrV~~~~~------------------------------~~------------------G~~aey~~v~~~~~~~i 112 (333)
T 1wly_A 81 DFTVGERVCTCLP------------------------------PL------------------GAYSQERLYPAEKLIKV 112 (333)
T ss_dssp SCCTTCEEEECSS------------------------------SC------------------CCSBSEEEEEGGGCEEC
T ss_pred CCCCCCEEEEecC------------------------------CC------------------CcceeEEEecHHHcEeC
Confidence 9999999975321 12 39999999999999999
Q ss_pred CCCCCcch--hhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 017431 156 DPQAPLDK--VCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 232 (371)
Q Consensus 156 P~~~~~~~--aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~ 232 (371)
|+++++++ ||+++.+++|||+++.+..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++++|+
T Consensus 113 P~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~g~ 191 (333)
T 1wly_A 113 PKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKLGC 191 (333)
T ss_dssp CTTCCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTC
T ss_pred CCCCChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCC
Confidence 99999999 99999999999999988889999999999997 9999999999999999 99999999999999999999
Q ss_pred cEEecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccch-he-eec--e
Q 017431 233 TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF-QL-VTG--R 307 (371)
Q Consensus 233 ~~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~-~~-~~~--~ 307 (371)
+.++++.+ .++.+.+.+.+++ ++|++||++|+ ..++.++++++++ |+++.+|.... ...+++.. .+ .++ +
T Consensus 192 ~~~~d~~~--~~~~~~i~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~ 266 (333)
T 1wly_A 192 HHTINYST--QDFAEVVREITGGKGVDVVYDSIGK-DTLQKSLDCLRPR-GMCAAYGHASG-VADPIRVVEDLGVRGSLF 266 (333)
T ss_dssp SEEEETTT--SCHHHHHHHHHTTCCEEEEEECSCT-TTHHHHHHTEEEE-EEEEECCCTTC-CCCCCCHHHHTTTTTSCE
T ss_pred CEEEECCC--HHHHHHHHHHhCCCCCeEEEECCcH-HHHHHHHHhhccC-CEEEEEecCCC-CcCCCChhHhhhhcCCcE
Confidence 99988876 6777888888876 89999999999 6799999999996 99999987542 22233333 33 346 8
Q ss_pred EEEeeecCCCcc----cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecCC
Q 017431 308 VWKGTAFGGFKS----RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQD 371 (371)
Q Consensus 308 ~~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~d 371 (371)
++.|+....+.. .++++++++++.+++++ +.++++|+|+++++|++.+.+++.. |+|++++|
T Consensus 267 ~i~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~ 333 (333)
T 1wly_A 267 ITRPALWHYMSNRSEIDEGSKCLFDAVKAGVLH--SSVAKTFPLREAAAAHKYMGGRQTIGSIVLLPQA 333 (333)
T ss_dssp EECCCGGGGSCSHHHHHHHHHHHHHHHHTTSCC--CCEEEEEEGGGHHHHHHHHHHCSCCSEEEEETTC
T ss_pred EEEEeehhhccCHHHHHHHHHHHHHHHHCCCcC--CCcceEEeHHHHHHHHHHHHcCCCceEEEEEeCC
Confidence 888875422111 23588899999999976 4688999999999999999887765 99999875
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-50 Score=374.35 Aligned_cols=316 Identities=21% Similarity=0.288 Sum_probs=267.4
Q ss_pred CcceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCC-CCCcccccceeEEEEEeCCCC-CC
Q 017431 1 MCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGV-TE 76 (371)
Q Consensus 1 ~~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~-~~p~v~G~e~~G~V~~~G~~v-~~ 76 (371)
||||+++.+++.+ ++++++|.|+|.++||+|||.+++||++|++.+.|.++.. .+|.++|||++|+|+++|+++ ++
T Consensus 22 ~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~ 101 (354)
T 2j8z_A 22 SMLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPGCQGH 101 (354)
T ss_dssp EEEEEEESSCSSGGGEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCCTTSCSSSCSEEEEEEEEECSCC--C
T ss_pred heeEEEEccCCCccceEEeecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEECCCcCCC
Confidence 5999999999864 9999999999999999999999999999999999876543 478999999999999999999 99
Q ss_pred CCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecC
Q 017431 77 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 156 (371)
Q Consensus 77 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP 156 (371)
|++||||+... .+| +|+||+.++++.++++|
T Consensus 102 ~~vGdrV~~~~-------------------------------~~G------------------~~aey~~v~~~~~~~iP 132 (354)
T 2j8z_A 102 WKIGDTAMALL-------------------------------PGG------------------GQAQYVTVPEGLLMPIP 132 (354)
T ss_dssp CCTTCEEEEEC-------------------------------SSC------------------CSBSEEEEEGGGEEECC
T ss_pred CCCCCEEEEec-------------------------------CCC------------------cceeEEEeCHHHcEECC
Confidence 99999997531 223 99999999999999999
Q ss_pred CCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE
Q 017431 157 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 235 (371)
Q Consensus 157 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v 235 (371)
+++++++||+++.+++|||+++.+..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++++|++.+
T Consensus 133 ~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~g~~~~ 211 (354)
T 2j8z_A 133 EGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKLGAAAG 211 (354)
T ss_dssp TTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCSEE
T ss_pred CCCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEE
Confidence 999999999999999999999988899999999999986 9999999999999999 89999999999999999999999
Q ss_pred ecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccc-hhe-eeceEEEee
Q 017431 236 VNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP-FQL-VTGRVWKGT 312 (371)
Q Consensus 236 i~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~-~~~~~~~g~ 312 (371)
+++.+ .++.+.+.+.+++ ++|++|||+|++ .++.++++++++ |+++.+|.... ...+++. ..+ .+++++.|+
T Consensus 212 ~~~~~--~~~~~~~~~~~~~~~~d~vi~~~G~~-~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~~i~g~ 286 (354)
T 2j8z_A 212 FNYKK--EDFSEATLKFTKGAGVNLILDCIGGS-YWEKNVNCLALD-GRWVLYGLMGG-GDINGPLFSKLLFKRGSLITS 286 (354)
T ss_dssp EETTT--SCHHHHHHHHTTTSCEEEEEESSCGG-GHHHHHHHEEEE-EEEEECCCTTC-SCCCSCHHHHHHHTTCEEEEC
T ss_pred EecCC--hHHHHHHHHHhcCCCceEEEECCCch-HHHHHHHhccCC-CEEEEEeccCC-CccCCChhHHHHhCCCEEEEE
Confidence 98876 6788888888877 899999999995 689999999996 99999987532 2234443 333 348888888
Q ss_pred ecCCCccc------C-cHHHHHHHHHcC-CCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecCC
Q 017431 313 AFGGFKSR------S-QVPWLVDKYMKK-EIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQD 371 (371)
Q Consensus 313 ~~~~~~~~------~-~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~d 371 (371)
.+...... . ..++++++++++ ++++.++++++|+|+++++|++.+.+++.. |+||++++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~ 354 (354)
T 2j8z_A 287 LLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLELPQ 354 (354)
T ss_dssp CSTTCCHHHHHHHHHHHHHHTGGGGTC---CCCCCCEEEEEEGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred EcccccccccHHHHHHHHHHHHHHHHcCCCccccCccceEEcHHHHHHHHHHHHhCCCCceEEEecCC
Confidence 65433210 0 123577788888 444567789999999999999999987765 99999864
|
| >3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-51 Score=375.49 Aligned_cols=306 Identities=13% Similarity=0.113 Sum_probs=244.0
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
||||+++.+..++++++++|.|+|.++||+|||++++||++|++.+.|.++..++|.++|||++|+|+++|+++++|++|
T Consensus 4 tMka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~vG 83 (315)
T 3goh_A 4 QHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWSNGHVPGVDGAGVIVKVGAKVDSKMLG 83 (315)
T ss_dssp EEEEEEEETTTTEEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTTCCCTTCCCCSEEEEEEEEECTTSCGGGTT
T ss_pred ceEEEEEeCCCCeeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCCcCCCCCEeeeeeEEEEEEeCCCCCCCCCC
Confidence 59999999633449999999999999999999999999999999999988777889999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|||+..+.. . .+| +|+||+.+|++.++++|++++
T Consensus 84 drV~~~~~~---------------------------~-~~G------------------~~aey~~v~~~~~~~iP~~~~ 117 (315)
T 3goh_A 84 RRVAYHTSL---------------------------K-RHG------------------SFAEFTVLNTDRVMTLPDNLS 117 (315)
T ss_dssp CEEEEECCT---------------------------T-SCC------------------SSBSEEEEETTSEEECCTTSC
T ss_pred CEEEEeCCC---------------------------C-CCc------------------ccccEEEEcHHHhccCcCCCC
Confidence 999865310 0 233 999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
+++||+++++++|||+++ +..++++|++|||+|+|++|++++|+|+.+|+ +|++++ ++++.++++++|++++++ +
T Consensus 118 ~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~lGa~~v~~--d 192 (315)
T 3goh_A 118 FERAAALPCPLLTAWQAF-EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKRGVRHLYR--E 192 (315)
T ss_dssp HHHHHTSHHHHHHHHHHH-TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHHTEEEEES--S
T ss_pred HHHHhhCccHHHHHHHHH-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHcCCCEEEc--C
Confidence 999999999999999999 89999999999999999999999999999999 999999 899999999999999884 1
Q ss_pred CCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeeec-CCC-
Q 017431 241 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAF-GGF- 317 (371)
Q Consensus 241 ~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~-~~~- 317 (371)
. .++ ++++|++|||+|++. ...++++++++ |+++.+|........+.....+ .+++++.++.. ...
T Consensus 193 -----~---~~v-~~g~Dvv~d~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (315)
T 3goh_A 193 -----P---SQV-TQKYFAIFDAVNSQN-AAALVPSLKAN-GHIICIQDRIPAPIDPAFTRTISYHEIALGALHDFGDRQ 261 (315)
T ss_dssp -----G---GGC-CSCEEEEECC--------TTGGGEEEE-EEEEEECCC----------CCSEEEEECGGGHHHHCCHH
T ss_pred -----H---HHh-CCCccEEEECCCchh-HHHHHHHhcCC-CEEEEEeCCCCccccchhhhcceeeEEEeecccccCChh
Confidence 1 122 349999999999955 68899999996 9999997643222222111111 12333333322 111
Q ss_pred ---cccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEecCC
Q 017431 318 ---KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKMQD 371 (371)
Q Consensus 318 ---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~~d 371 (371)
...+.++++++++++++++ ++++++|+|+++++|++.+. +...|+||+++|
T Consensus 262 ~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~-~~~gKvvi~~~~ 315 (315)
T 3goh_A 262 DWQILMQQGEALLTLIAQGKME--IAAPDIFRFEQMIEALDHSE-QTKLKTVLTLNE 315 (315)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSC--CCCCEEEEGGGHHHHHHHHH-HHCCCEEEESCC
T ss_pred HHHHHHHHHHHHHHHHHCCCcc--cccceEecHHHHHHHHHHHH-hcCCcEEEEecC
Confidence 0112467899999999975 56789999999999999998 444599999976
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-50 Score=373.06 Aligned_cols=311 Identities=22% Similarity=0.284 Sum_probs=264.7
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC--CCCCcccccceeEEEEEeCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE--GLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~--~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
||||+++.+++++++++++|.|+|.++||+|||++++||++|++.+.|..+. .++|.++|||++|+|+++|+++++|+
T Consensus 7 ~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~~ 86 (343)
T 3gaz_A 7 TMIAAVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTVVAVGPEVDSFR 86 (343)
T ss_dssp EEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred hheEEEEecCCCceEEEeccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEEEEEEECCCCCCCC
Confidence 4999999999988999999999999999999999999999999999887532 46899999999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||||+.... |....+ |+|+||++++++.++++|++
T Consensus 87 vGdrV~~~~~--------------------------g~~~~~------------------G~~aey~~v~~~~~~~~P~~ 122 (343)
T 3gaz_A 87 VGDAVFGLTG--------------------------GVGGLQ------------------GTHAQFAAVDARLLASKPAA 122 (343)
T ss_dssp TTCEEEEECC--------------------------SSTTCC------------------CSSBSEEEEEGGGEEECCTT
T ss_pred CCCEEEEEeC--------------------------CCCCCC------------------cceeeEEEecHHHeeeCCCC
Confidence 9999975321 000022 39999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
+++++||+++++++|||+++.+..++++|++|||+|+ |++|++++|+|+..|+ +|+++ +++++.++++++|++. ++
T Consensus 123 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~lGa~~-i~ 199 (343)
T 3gaz_A 123 LTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDLGATP-ID 199 (343)
T ss_dssp SCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHHTSEE-EE
T ss_pred CCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHcCCCE-ec
Confidence 9999999999999999999989999999999999995 9999999999999999 89999 8899999999999988 76
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeeecC
Q 017431 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFG 315 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~ 315 (371)
.+ .++.+.+.+.+++ ++|++|||+|+ ..+..++++++++ |+++.+|... .++...+ .+++++.++...
T Consensus 200 -~~--~~~~~~~~~~~~~~g~D~vid~~g~-~~~~~~~~~l~~~-G~iv~~g~~~-----~~~~~~~~~~~~~~~g~~~~ 269 (343)
T 3gaz_A 200 -AS--REPEDYAAEHTAGQGFDLVYDTLGG-PVLDASFSAVKRF-GHVVSCLGWG-----THKLAPLSFKQATYSGVFTL 269 (343)
T ss_dssp -TT--SCHHHHHHHHHTTSCEEEEEESSCT-HHHHHHHHHEEEE-EEEEESCCCS-----CCCCHHHHHTTCEEEECCTT
T ss_pred -cC--CCHHHHHHHHhcCCCceEEEECCCc-HHHHHHHHHHhcC-CeEEEEcccC-----ccccchhhhcCcEEEEEEec
Confidence 44 6788888899888 99999999998 6699999999996 9999998753 1222222 347788876542
Q ss_pred CC--------cccCcHHHHHHHHHcCCCCCCCcee-eeeecccHHHHHHHHhCCCe----e-EEEEecC
Q 017431 316 GF--------KSRSQVPWLVDKYMKKEIKVDEYVT-HNMTLGEINEAFRYMHGGDC----L-RCVLKMQ 370 (371)
Q Consensus 316 ~~--------~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~A~~~~~~~~~----~-kvvl~~~ 370 (371)
.. ...++++++++++++++++ +.++ ++|+|+++++|++.+.+++. . |+|+++.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~~l~~~~~A~~~~~~~~~~Gr~~GK~v~~~~ 336 (343)
T 3gaz_A 270 HTLLANEGLAHFGEMLREADALVQTGKLA--PRLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITVE 336 (343)
T ss_dssp HHHHHTCSHHHHHHHHHHHHHHHHTTCCC--CCBCSCCEETTCHHHHHHHHHTCTTCCCCSSBCEEECC
T ss_pred cchhcccchHHHHHHHHHHHHHHHCCCcc--cCccCcEecHHHHHHHHHHHHcCCCcccccceEEEEec
Confidence 11 1125688999999999976 4577 79999999999999988754 4 8998864
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-49 Score=373.21 Aligned_cols=312 Identities=15% Similarity=0.194 Sum_probs=263.4
Q ss_pred CcceEEeecC---CCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCC
Q 017431 1 MCKAAVAWEP---NKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVT 75 (371)
Q Consensus 1 ~~~a~~~~~~---~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~ 75 (371)
||||+++.++ ++| ++++++|.|+|.++||+|||.+++||++|++.+.|..+...+|.++|||++|+|+++|++++
T Consensus 22 ~MkA~~~~~~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~ 101 (363)
T 4dvj_A 22 SMKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWKVIGYDAAGIVSAVGPDVT 101 (363)
T ss_dssp EEEEEEBSSCCCTTSTTSSEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC--CCSBCCCCCEEEEEEEECTTCC
T ss_pred eeEEEEEeccCCCCCCceEEEeecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCCCCCCCCcccceeEEEEEEeCCCCC
Confidence 4899999877 333 99999999999999999999999999999999999877667899999999999999999999
Q ss_pred CCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEec
Q 017431 76 EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI 155 (371)
Q Consensus 76 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~l 155 (371)
+|++||||+..+.. . .+| +|+||+.++++.++++
T Consensus 102 ~~~vGdrV~~~~~~---------------------------~-~~G------------------~~aey~~v~~~~~~~i 135 (363)
T 4dvj_A 102 LFRPGDEVFYAGSI---------------------------I-RPG------------------TNAEFHLVDERIVGRK 135 (363)
T ss_dssp SCCTTCEEEECCCT---------------------------T-SCC------------------SCBSEEEEEGGGCEEC
T ss_pred CCCCCCEEEEccCC---------------------------C-CCc------------------cceEEEEeCHHHeeEC
Confidence 99999999853210 0 233 9999999999999999
Q ss_pred CCCCCcchhhhccccchhhhhhhhhcCCCC-----CCCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHH
Q 017431 156 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVE-----PGSIVAVFGL-GTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAK 228 (371)
Q Consensus 156 P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~-----~g~~VlI~Ga-g~vG~~ai~la~~~-g~~~v~~v~~~~~~~~~~~ 228 (371)
|+++++++||+++++++|||+++++..+++ +|++|||+|+ |++|++++|+|+++ |+ +|+++++++++.++++
T Consensus 136 P~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~-~Vi~~~~~~~~~~~~~ 214 (363)
T 4dvj_A 136 PKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDL-TVIATASRPETQEWVK 214 (363)
T ss_dssp CTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCS-EEEEECSSHHHHHHHH
T ss_pred CCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHH
Confidence 999999999999999999999998888988 8999999985 99999999999985 77 9999999999999999
Q ss_pred hcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-ece
Q 017431 229 NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGR 307 (371)
Q Consensus 229 ~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~ 307 (371)
++|+++++++.+ ++.+.+++..++++|++|||+|++..++.++++++++ |+++.+|... +++...+. +++
T Consensus 215 ~lGad~vi~~~~---~~~~~v~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~-----~~~~~~~~~k~~ 285 (363)
T 4dvj_A 215 SLGAHHVIDHSK---PLAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQ-GRFCLIDDPS-----AFDIMLFKRKAV 285 (363)
T ss_dssp HTTCSEEECTTS---CHHHHHHTTCSCCEEEEEECSCHHHHHHHHHHHSCTT-CEEEECSCCS-----SCCGGGGTTTTC
T ss_pred HcCCCEEEeCCC---CHHHHHHHhcCCCceEEEECCCchhhHHHHHHHhcCC-CEEEEECCCC-----ccchHHHhhccc
Confidence 999999998864 5777888874449999999999977899999999996 9999996532 23333333 367
Q ss_pred EEEeeecCCC-----cc----cCcHHHHHHHHHcCCCCCCCceeeee---ecccHHHHHHHHhCCCee-EEEEecC
Q 017431 308 VWKGTAFGGF-----KS----RSQVPWLVDKYMKKEIKVDEYVTHNM---TLGEINEAFRYMHGGDCL-RCVLKMQ 370 (371)
Q Consensus 308 ~~~g~~~~~~-----~~----~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~~~A~~~~~~~~~~-kvvl~~~ 370 (371)
++.++..... .. .+.+++++++++++++++ .++++| +++++++|++.+.+++.. |+||++.
T Consensus 286 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~i~~~~~~~~l~~~~~A~~~~~~~~~~GKvVl~~~ 359 (363)
T 4dvj_A 286 SIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVDEGRLRT--TLTNRLSPINAANLKQAHALVESGTARGKVVIEGF 359 (363)
T ss_dssp EEEECCTTHHHHHTCTTTHHHHHHHHHHHHHHHHTSSCC--CEEEEECSCSHHHHHHHHHHHHHTCCCSEEEEECS
T ss_pred eEEEEEeeccccccCcchhhHHHHHHHHHHHHHCCCeec--cccceecCCCHHHHHHHHHHHHhCCCceEEEEeCc
Confidence 7777554221 01 245788999999999874 466655 999999999999998876 9999875
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-50 Score=369.74 Aligned_cols=306 Identities=20% Similarity=0.236 Sum_probs=257.5
Q ss_pred CcceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCC-----CCCCCCcccccceeEEEEEeCCC
Q 017431 1 MCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD-----PEGLFPCILGHEAAGIVESVGEG 73 (371)
Q Consensus 1 ~~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~-----~~~~~p~v~G~e~~G~V~~~G~~ 73 (371)
+|||+++.+++++ ++++++|.|+|.++||+|||++++||++|++.+.|.. ....+|.++|||++|+|+++|++
T Consensus 6 ~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~vG~~ 85 (321)
T 3tqh_A 6 EMKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELGSD 85 (321)
T ss_dssp EEEEEEESSSCSGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEECTT
T ss_pred cceEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEeCCC
Confidence 4899999999987 9999999999999999999999999999999998832 23468999999999999999999
Q ss_pred CCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceE
Q 017431 74 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVA 153 (371)
Q Consensus 74 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~ 153 (371)
+++|++||||+..+..++ .+ |+|+||+.++++.++
T Consensus 86 v~~~~~GdrV~~~~~~~~---------------------------~~------------------G~~aey~~v~~~~~~ 120 (321)
T 3tqh_A 86 VNNVNIGDKVMGIAGFPD---------------------------HP------------------CCYAEYVCASPDTII 120 (321)
T ss_dssp CCSCCTTCEEEEECSTTT---------------------------CC------------------CCSBSEEEECGGGEE
T ss_pred CCCCCCCCEEEEccCCCC---------------------------CC------------------CcceEEEEecHHHhc
Confidence 999999999986542111 22 399999999999999
Q ss_pred ecCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEc-CChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 017431 154 KIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 232 (371)
Q Consensus 154 ~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~G-ag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~ 232 (371)
++|+++++++||+++++++|||+++ +..++++|++|||+| +|++|++++|+|+.+|+ +|++++ ++++.++++++|+
T Consensus 121 ~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~-~~~~~~~~~~lGa 197 (321)
T 3tqh_A 121 QKLEKLSFLQAASLPTAGLTALQAL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTA-SKRNHAFLKALGA 197 (321)
T ss_dssp ECCTTSCHHHHHHSHHHHHHHHHHH-HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEE-CHHHHHHHHHHTC
T ss_pred cCCCCCCHHHHhhhhhHHHHHHHHH-HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEe-ccchHHHHHHcCC
Confidence 9999999999999999999999998 889999999999997 59999999999999999 888886 4566899999999
Q ss_pred cEEecCCCCCch-HHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEe
Q 017431 233 TEFVNPKDHDKP-IQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKG 311 (371)
Q Consensus 233 ~~vi~~~~~~~~-~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g 311 (371)
++++++.+ .+ +.+.+ .++|++|||+|++. .+.++++++++ |+++.+|...... .+ .....+++++.+
T Consensus 198 ~~~i~~~~--~~~~~~~~-----~g~D~v~d~~g~~~-~~~~~~~l~~~-G~iv~~g~~~~~~--~~-~~~~~~~~~~~~ 265 (321)
T 3tqh_A 198 EQCINYHE--EDFLLAIS-----TPVDAVIDLVGGDV-GIQSIDCLKET-GCIVSVPTITAGR--VI-EVAKQKHRRAFG 265 (321)
T ss_dssp SEEEETTT--SCHHHHCC-----SCEEEEEESSCHHH-HHHHGGGEEEE-EEEEECCSTTHHH--HH-HHHHHTTCEEEC
T ss_pred CEEEeCCC--cchhhhhc-----cCCCEEEECCCcHH-HHHHHHhccCC-CEEEEeCCCCchh--hh-hhhhhcceEEEE
Confidence 99999877 44 43322 37999999999966 59999999996 9999997643211 11 111233677776
Q ss_pred eecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecC
Q 017431 312 TAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 370 (371)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~ 370 (371)
+... ...++++.++++++++++++ .++++|+|+++++|++.+.+++.. |+||+++
T Consensus 266 ~~~~--~~~~~~~~~~~l~~~g~l~~--~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~~ 321 (321)
T 3tqh_A 266 LLKQ--FNIEELHYLGKLVSEDKLRI--EISRIFQLSEAVTAHELLETGHVRGKLVFKVR 321 (321)
T ss_dssp CCCC--CCHHHHHHHHHHHHTTSSCC--CEEEEECGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred EecC--CCHHHHHHHHHHHHCCCccc--ccccEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence 5332 23468999999999999875 588999999999999999998876 9999874
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-48 Score=366.71 Aligned_cols=310 Identities=23% Similarity=0.346 Sum_probs=262.7
Q ss_pred CcceEEeecCCCC--eEE-EEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCC
Q 017431 1 MCKAAVAWEPNKP--LVI-EDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTE 76 (371)
Q Consensus 1 ~~~a~~~~~~~~~--~~~-~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~ 76 (371)
+|||+++.+++.+ +++ ++.|.|+|.++||+|||.+++||++|++.+.|.++. ..+|.++|||++|+|+++|+++++
T Consensus 29 ~Mka~~~~~~g~~~~l~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~~v~~ 108 (351)
T 1yb5_A 29 LMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASA 108 (351)
T ss_dssp EEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTCTT
T ss_pred eEEEEEEccCCCcceeEEeeecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcCCceeEEEEEEECCCCCC
Confidence 4899999988865 899 899999999999999999999999999999987643 368999999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecC
Q 017431 77 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 156 (371)
Q Consensus 77 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP 156 (371)
|++||||++.+. .+| +|+||++++++.++++|
T Consensus 109 ~~vGdrV~~~~~------------------------------~~G------------------~~aey~~v~~~~~~~~P 140 (351)
T 1yb5_A 109 FKKGDRVFTSST------------------------------ISG------------------GYAEYALAADHTVYKLP 140 (351)
T ss_dssp CCTTCEEEESCC------------------------------SSC------------------SSBSEEEEEGGGEEECC
T ss_pred CCCCCEEEEeCC------------------------------CCC------------------cceeEEEECHHHeEECC
Confidence 999999985421 223 99999999999999999
Q ss_pred CCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE
Q 017431 157 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 235 (371)
Q Consensus 157 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v 235 (371)
+++++++||+++++++|||+++.+..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.++++++|++.+
T Consensus 141 ~~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~ 219 (351)
T 1yb5_A 141 EKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEV 219 (351)
T ss_dssp TTSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEE
T ss_pred CCCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHcCCCEE
Confidence 999999999999999999999988899999999999998 9999999999999999 89999999999999999999999
Q ss_pred ecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeee
Q 017431 236 VNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTA 313 (371)
Q Consensus 236 i~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~ 313 (371)
+++.+ .++.+.+.+.+++ ++|++||++|.+ .+..++++++++ |+++.+|... ..+++...+ .+++++.|+.
T Consensus 220 ~d~~~--~~~~~~~~~~~~~~~~D~vi~~~G~~-~~~~~~~~l~~~-G~iv~~g~~~---~~~~~~~~~~~~~~~i~g~~ 292 (351)
T 1yb5_A 220 FNHRE--VNYIDKIKKYVGEKGIDIIIEMLANV-NLSKDLSLLSHG-GRVIVVGSRG---TIEINPRDTMAKESSIIGVT 292 (351)
T ss_dssp EETTS--TTHHHHHHHHHCTTCEEEEEESCHHH-HHHHHHHHEEEE-EEEEECCCCS---CEEECTHHHHTTTCEEEECC
T ss_pred EeCCC--chHHHHHHHHcCCCCcEEEEECCChH-HHHHHHHhccCC-CEEEEEecCC---CCccCHHHHHhCCcEEEEEE
Confidence 98876 6778888888877 899999999984 689999999996 9999998642 233444333 3478888876
Q ss_pred cCCCcccCcH----HHHHHHHHcCCCCCCCceeeeeecccHHHHHHH-HhCCCee-EEEEec
Q 017431 314 FGGFKSRSQV----PWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRY-MHGGDCL-RCVLKM 369 (371)
Q Consensus 314 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~-~~~~~~~-kvvl~~ 369 (371)
+... ..+++ +.+.+++.+++++ ++++++|+|+++++|++. +++++.. |+||++
T Consensus 293 ~~~~-~~~~~~~~~~~l~~~~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~~gKvvi~~ 351 (351)
T 1yb5_A 293 LFSS-TKEEFQQYAAALQAGMEIGWLK--PVIGSQYPLEKVAEAHENIIHGSGATGKMILLL 351 (351)
T ss_dssp GGGC-CHHHHHHHHHHHHHHHHHTCCC--CCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred eecC-CHHHHHHHHHHHHHHHHCCCcc--CccceEEcHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 4322 12233 3455677778754 568899999999999998 6655554 999874
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-49 Score=364.89 Aligned_cols=313 Identities=21% Similarity=0.269 Sum_probs=263.7
Q ss_pred CcceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 017431 1 MCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 1 ~~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
||||+++.+++.+ +++++.|.|+|.++||+|||++++||++|++.+.|.++...+|.++|||++|+|+++|+++++|+
T Consensus 1 ~Mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~ 80 (327)
T 1qor_A 1 MATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIK 80 (327)
T ss_dssp -CEEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred CcEEEEEcCCCChhheEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCCCceeEEEEEEECCCCCCCC
Confidence 7999999998865 89999999999999999999999999999999999775556899999999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||||. .. +. .+ |+|+||+.+|++.++++|++
T Consensus 81 ~GdrV~-~~----g~-------------------------~~------------------G~~aey~~v~~~~~~~iP~~ 112 (327)
T 1qor_A 81 AGDRVV-YA----QS-------------------------AL------------------GAYSSVHNIIADKAAILPAA 112 (327)
T ss_dssp TTCEEE-ES----CC-------------------------SS------------------CCSBSEEEEEGGGEEECCTT
T ss_pred CCCEEE-EC----CC-------------------------CC------------------ceeeeEEEecHHHcEECCCC
Confidence 999994 21 00 12 39999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
+++++||+++++++|||+++.+..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++++|++.+++
T Consensus 113 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~~ 191 (327)
T 1qor_A 113 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVIN 191 (327)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred CCHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEE
Confidence 9999999999999999999987899999999999986 9999999999999999 9999999999999999999999998
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-ee-ceEEEeeec
Q 017431 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VT-GRVWKGTAF 314 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~-~~~~~g~~~ 314 (371)
+.+ .++.+.+.+.+++ ++|++||++|. ..++.++++++++ |+++.+|.... ....++...+ .+ ++++.+...
T Consensus 192 ~~~--~~~~~~~~~~~~~~~~D~vi~~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 266 (327)
T 1qor_A 192 YRE--EDLVERLKEITGGKKVRVVYDSVGR-DTWERSLDCLQRR-GLMVSFGNSSG-AVTGVNLGILNQKGSLYVTRPSL 266 (327)
T ss_dssp TTT--SCHHHHHHHHTTTCCEEEEEECSCG-GGHHHHHHTEEEE-EEEEECCCTTC-CCCCBCTHHHHHTTSCEEECCCH
T ss_pred CCC--ccHHHHHHHHhCCCCceEEEECCch-HHHHHHHHHhcCC-CEEEEEecCCC-CCCccCHHHHhhccceEEEccch
Confidence 876 6777888888877 89999999994 7799999999996 99999987532 1223333322 23 455554332
Q ss_pred CCCc-----ccCcHHHHHHHHHcCCCCCCCcee--eeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 315 GGFK-----SRSQVPWLVDKYMKKEIKVDEYVT--HNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 315 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
..+. ..+.+++++++++++++++ .++ ++|+|+++++|++.+.+++.. |+||++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~i~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 327 (327)
T 1qor_A 267 QGYITTREELTEASNELFSLIASGVIKV--DVAEQQKYPLKDAQRAHEILESRATQGSSLLIP 327 (327)
T ss_dssp HHHCCSHHHHHHHHHHHHHHHHTTSSCC--CCCGGGEEEGGGHHHHHHHHHTTCCCBCCEEEC
T ss_pred hhhcCCHHHHHHHHHHHHHHHHCCCccc--ccccCcEEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 1111 1245788999999999764 577 899999999999999887765 999864
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-49 Score=369.66 Aligned_cols=312 Identities=22% Similarity=0.312 Sum_probs=257.2
Q ss_pred CcceEEeecCCCC---eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCC-CCCcccccceeEEEEEeCCCCCC
Q 017431 1 MCKAAVAWEPNKP---LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVTE 76 (371)
Q Consensus 1 ~~~a~~~~~~~~~---~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~-~~p~v~G~e~~G~V~~~G~~v~~ 76 (371)
+|||+++.+++.| +++++.|.|+|.++||+|||++++||++|++.+.|.++.. .+|.++|||++|+|+++|+++++
T Consensus 26 ~mka~~~~~~g~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~~v~~ 105 (357)
T 1zsy_A 26 RVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGSNVTG 105 (357)
T ss_dssp CEEEEEESSSSCHHHHEEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSEECCSCCEEEEEEECTTCCS
T ss_pred hhEEEEEecCCCccceEEEeeccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCCCCCCCccccceEEEEEEEeCCCCCC
Confidence 4899999999986 8999999999999999999999999999999999876543 57999999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecC
Q 017431 77 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 156 (371)
Q Consensus 77 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP 156 (371)
|++||||++.+. .+ |+|+||++++++.++++|
T Consensus 106 ~~vGdrV~~~~~------------------------------~~------------------G~~aey~~v~~~~~~~iP 137 (357)
T 1zsy_A 106 LKPGDWVIPANA------------------------------GL------------------GTWRTEAVFSEEALIQVP 137 (357)
T ss_dssp CCTTCEEEESSS------------------------------CS------------------CCSBSEEEEEGGGEEEEC
T ss_pred CCCCCEEEEcCC------------------------------CC------------------ccceeEEecCHHHcEECC
Confidence 999999985431 12 399999999999999999
Q ss_pred CCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC-h---hhHHHHHhcC
Q 017431 157 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID-P---KKFDRAKNFG 231 (371)
Q Consensus 157 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~-~---~~~~~~~~~g 231 (371)
+++++++||+++++++|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +++++.++ + ++.++++++|
T Consensus 138 ~~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~~~~lG 216 (357)
T 1zsy_A 138 SDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGL-RTINVVRDRPDIQKLSDRLKSLG 216 (357)
T ss_dssp SSSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEECCCSCHHHHHHHHHHTT
T ss_pred CCCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCC-EEEEEecCccchHHHHHHHHhcC
Confidence 999999999999999999999988899999999999998 9999999999999999 56555443 3 2567889999
Q ss_pred CcEEecCCCCCchHHHHHHhhcCC--CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceE
Q 017431 232 VTEFVNPKDHDKPIQQVLVDLTDG--GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRV 308 (371)
Q Consensus 232 ~~~vi~~~~~~~~~~~~~~~~~~g--g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~ 308 (371)
+++++++.+ ...+.+.+.+++ ++|++|||+|++. ...++++++++ |+++.+|... .....++...+. ++++
T Consensus 217 a~~vi~~~~---~~~~~~~~~~~~~~~~Dvvid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~~~~~~ 290 (357)
T 1zsy_A 217 AEHVITEEE---LRRPEMKNFFKDMPQPRLALNCVGGKS-STELLRQLARG-GTMVTYGGMA-KQPVVASVSLLIFKDLK 290 (357)
T ss_dssp CSEEEEHHH---HHSGGGGGTTSSSCCCSEEEESSCHHH-HHHHHTTSCTT-CEEEECCCCT-TCCBCCCHHHHHHSCCE
T ss_pred CcEEEecCc---chHHHHHHHHhCCCCceEEEECCCcHH-HHHHHHhhCCC-CEEEEEecCC-CCCCCCCHHHHHhcCce
Confidence 999987643 112345555554 5999999999865 56799999996 9999998643 223344443333 4888
Q ss_pred EEeeecCCCc-------ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 309 WKGTAFGGFK-------SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 309 ~~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
+.++....+. ..+.+++++++++++++++. +.++|+|+++++|++.+.+++.. |+||++
T Consensus 291 i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 357 (357)
T 1zsy_A 291 LRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAP--ACSQVPLQDYQSALEASMKPFISSKQILTM 357 (357)
T ss_dssp EEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCC--CEEEEEGGGHHHHHHHHTSSSCSSEEEEEC
T ss_pred EEEEEcchhcccCCHHHHHHHHHHHHHHHHcCCCcCc--cceEEcHHHHHHHHHHHHhCCCCCcEEEeC
Confidence 8888654321 12357889999999998764 45999999999999999888765 999975
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-49 Score=370.75 Aligned_cols=317 Identities=15% Similarity=0.179 Sum_probs=260.9
Q ss_pred CcceEEeecCCCC---eEEEEeeCCCCC--CCeEEEEEeeeecCccccccccCCCCC-CCCC---------cccccceeE
Q 017431 1 MCKAAVAWEPNKP---LVIEDVQVAPPQ--AGEVRIKILFTALCHTDAYTWSGKDPE-GLFP---------CILGHEAAG 65 (371)
Q Consensus 1 ~~~a~~~~~~~~~---~~~~~~~~~~~~--~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p---------~v~G~e~~G 65 (371)
||||+++.++++| ++++++|.|+|. ++||+|||++++||++|++.+.|.++. ..+| .++|||++|
T Consensus 3 ~mka~~~~~~g~~~~~l~~~~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~~~~~~~p~~i~G~E~~G 82 (364)
T 1gu7_A 3 TAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLF 82 (364)
T ss_dssp EEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCEE
T ss_pred eEEEEEeccCCCchheeEEeeccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCCCCCCccccccCcccccCceeEE
Confidence 5999999999976 999999999887 999999999999999999999987653 2467 899999999
Q ss_pred EEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeE
Q 017431 66 IVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYT 145 (371)
Q Consensus 66 ~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~ 145 (371)
+|+++|+++++|++||||++.+. .+ |+|+||+
T Consensus 83 ~V~~vG~~v~~~~vGdrV~~~~~------------------------------~~------------------G~~aey~ 114 (364)
T 1gu7_A 83 EVIKVGSNVSSLEAGDWVIPSHV------------------------------NF------------------GTWRTHA 114 (364)
T ss_dssp EEEEECTTCCSCCTTCEEEESSS------------------------------CC------------------CCSBSEE
T ss_pred EEEEeCCCCCcCCCCCEEEecCC------------------------------CC------------------CcchheE
Confidence 99999999999999999985421 12 3999999
Q ss_pred EecccceEecCC-----------CCCcchhhhccccchhhhhhhhhcCCCCCC-CEEEEEcC-ChHHHHHHHHHHHcCCC
Q 017431 146 VVHDVSVAKIDP-----------QAPLDKVCLLGCGVPTGLGAVWNTAKVEPG-SIVAVFGL-GTVGLAVAEGAKAAGAS 212 (371)
Q Consensus 146 ~v~~~~v~~lP~-----------~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g-~~VlI~Ga-g~vG~~ai~la~~~g~~ 212 (371)
+++++.++++|+ ++++++||+++++++|||+++.+..++++| ++|||+|+ |++|++++|+|+.+|+
T Consensus 115 ~v~~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga- 193 (364)
T 1gu7_A 115 LGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF- 193 (364)
T ss_dssp EEEGGGEEEECCHHHHHHTTCSCCCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-
T ss_pred ecCHHHeEEcCCccccccccccCCCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCC-
Confidence 999999999999 899999999999999999999877899999 99999998 9999999999999999
Q ss_pred eEEEEcCChhh----HHHHHhcCCcEEecCCCC-CchHHHHHHhhc--CC-CccEEEEccCCHHHHHHHHHHhccCCceE
Q 017431 213 RVIGIDIDPKK----FDRAKNFGVTEFVNPKDH-DKPIQQVLVDLT--DG-GVDYSFECIGNVSVMRAALECCHKGWGTS 284 (371)
Q Consensus 213 ~v~~v~~~~~~----~~~~~~~g~~~vi~~~~~-~~~~~~~~~~~~--~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~i 284 (371)
+++++.+++++ .++++++|+++++++.+. ..++.+.+++.+ ++ ++|++|||+|++.. ..++++++++ |++
T Consensus 194 ~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dvvid~~G~~~~-~~~~~~l~~~-G~~ 271 (364)
T 1gu7_A 194 NSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSS-TGIARKLNNN-GLM 271 (364)
T ss_dssp EEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHH-HHHHHTSCTT-CEE
T ss_pred EEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccCCCceEEEECCCchhH-HHHHHHhccC-CEE
Confidence 77777665544 677899999999987531 135777888887 55 99999999999664 4889999996 999
Q ss_pred EEEccCCCCCcccccchhee-eceEEEeeecCCCc------ccCcHHHHHHHHHcCCCCCCCceeeee-ecccHHHHHHH
Q 017431 285 VIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFK------SRSQVPWLVDKYMKKEIKVDEYVTHNM-TLGEINEAFRY 356 (371)
Q Consensus 285 v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~A~~~ 356 (371)
+.+|... ....+++...+. +++++.++....+. ..+++++++++++++++++.+..+..+ +++++++|++.
T Consensus 272 v~~g~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~l~~~~~A~~~ 350 (364)
T 1gu7_A 272 LTYGGMS-FQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQD 350 (364)
T ss_dssp EECCCCS-SCCEEECHHHHHHSCCEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTCCCCCCCEEEECCSSSCHHHHHHH
T ss_pred EEecCCC-CCCcccCHHHHhhcCcEEEEEchhHhcccCHHHHHHHHHHHHHHHHcCCcccccceEEecCchhhHHHHHHH
Confidence 9998753 223344444333 47888887654321 124688999999999998765544434 34599999999
Q ss_pred HhCCCee-EEEEec
Q 017431 357 MHGGDCL-RCVLKM 369 (371)
Q Consensus 357 ~~~~~~~-kvvl~~ 369 (371)
+.+++.. |+||++
T Consensus 351 ~~~~~~~gKvvv~~ 364 (364)
T 1gu7_A 351 GVANSKDGKQLITY 364 (364)
T ss_dssp HHHTGGGSCEEEEC
T ss_pred HHhCCCCceEEEeC
Confidence 9887665 999975
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-48 Score=365.02 Aligned_cols=314 Identities=19% Similarity=0.241 Sum_probs=265.2
Q ss_pred CcceEEeecCCC----CeEE-EEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCC
Q 017431 1 MCKAAVAWEPNK----PLVI-EDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGV 74 (371)
Q Consensus 1 ~~~a~~~~~~~~----~~~~-~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v 74 (371)
||||+++.+++. .+++ +++|.|+|.++||+|||.+++||++|++.+.|.++. .++|.++|||++|+|+++|+++
T Consensus 23 ~MkA~~~~~~g~~~~~~l~~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~i~G~E~~G~V~~vG~~V 102 (362)
T 2c0c_A 23 MMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALGLSA 102 (362)
T ss_dssp EEEEEEECSCCSSHHHHEEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCTTCCSCEECCSEEEEEEEEECTTG
T ss_pred hceEEEEeecCCCccceeEEEeecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCCCCCCCCCCCceeEEEEEEECCCc
Confidence 599999999985 3889 999999999999999999999999999999997643 3689999999999999999999
Q ss_pred C-CCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceE
Q 017431 75 T-EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVA 153 (371)
Q Consensus 75 ~-~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~ 153 (371)
+ +|++||||++. .+ |+|+||++++++.++
T Consensus 103 ~~~~~vGdrV~~~--------------------------------~~------------------G~~aey~~v~~~~~~ 132 (362)
T 2c0c_A 103 SARYTVGQAVAYM--------------------------------AP------------------GSFAEYTVVPASIAT 132 (362)
T ss_dssp GGTCCTTCEEEEE--------------------------------CS------------------CCSBSEEEEEGGGCE
T ss_pred cCCCCCCCEEEEc--------------------------------cC------------------CcceeEEEEcHHHeE
Confidence 9 99999999753 12 399999999999999
Q ss_pred ecCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 017431 154 KIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 232 (371)
Q Consensus 154 ~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~ 232 (371)
++|+. + .++|+++.+++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++++|+
T Consensus 133 ~~P~~-~-~~aaal~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga 209 (362)
T 2c0c_A 133 PVPSV-K-PEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKSLGC 209 (362)
T ss_dssp ECSSS-C-HHHHTTTTHHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTC
T ss_pred ECCCC-c-hHhhcccchHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHcCC
Confidence 99996 3 5677888899999999988889999999999995 9999999999999999 89999999999999999999
Q ss_pred cEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCC------cc---cccchhe
Q 017431 233 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQ------EI---STRPFQL 303 (371)
Q Consensus 233 ~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~------~~---~~~~~~~ 303 (371)
+.++++.+ .++.+.+++.+++++|++|||+|. ..++.++++++++ |+++.+|...... .+ .+....+
T Consensus 210 ~~~~~~~~--~~~~~~~~~~~~~g~D~vid~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~ 285 (362)
T 2c0c_A 210 DRPINYKT--EPVGTVLKQEYPEGVDVVYESVGG-AMFDLAVDALATK-GRLIVIGFISGYQTPTGLSPVKAGTLPAKLL 285 (362)
T ss_dssp SEEEETTT--SCHHHHHHHHCTTCEEEEEECSCT-HHHHHHHHHEEEE-EEEEECCCGGGTTSSSCCCCCCCTTHHHHHH
T ss_pred cEEEecCC--hhHHHHHHHhcCCCCCEEEECCCH-HHHHHHHHHHhcC-CEEEEEeCCCCcCcccccccccccccHHHHH
Confidence 99998876 567777877775589999999998 6799999999996 9999998753211 00 1111222
Q ss_pred eeceEEEeeecCCCc--ccCcHHHHHHHHHcCCCCCCCc------eeeeeecccHHHHHHHHhCCCee-EEEEecCC
Q 017431 304 VTGRVWKGTAFGGFK--SRSQVPWLVDKYMKKEIKVDEY------VTHNMTLGEINEAFRYMHGGDCL-RCVLKMQD 371 (371)
Q Consensus 304 ~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~------i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~d 371 (371)
.+++++.|+....+. ..+++++++++++++++++... +++.|+|+++++|++.+++++.. |+||+++|
T Consensus 286 ~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~ 362 (362)
T 2c0c_A 286 KKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELPH 362 (362)
T ss_dssp HHTCEEEECCGGGCGGGHHHHHHHHHHHHHTTCSCCCEECSTTSTTCSCBSTTHHHHHHHHHHTTCCSBEEEEECCC
T ss_pred hhcceEEEEEhhhhhhhHHHHHHHHHHHHHCCCeEeeeccccccccccccCHHHHHHHHHHHHcCCCCceEEEEcCC
Confidence 348888888754432 2356889999999999886533 34678999999999999887765 99999875
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-49 Score=368.48 Aligned_cols=312 Identities=16% Similarity=0.188 Sum_probs=260.8
Q ss_pred cceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
|||+++.++++| ++++++|.|+|.++||+|||++++||++|++.+.|..+. .++|.++|||++|+|+++| +++|+
T Consensus 1 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~G--v~~~~ 78 (324)
T 3nx4_A 1 MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVHASE--DPRFH 78 (324)
T ss_dssp CEEEEEEESSSSEEEEEEECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTTCCCSSSBCCCSEEEEEEEEES--STTCC
T ss_pred CceEEEecCCCCceeeEeecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCCCCCCCCccccceeEEEEEEeC--CCCCC
Confidence 899999999987 899999999999999999999999999999999998764 3789999999999999999 57899
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||||++.+. . .|.. .+ |+|+||+.+|++.++++|++
T Consensus 79 vGdrV~~~~~---~---------------------~g~~-~~------------------G~~aey~~v~~~~~~~iP~~ 115 (324)
T 3nx4_A 79 AGQEVLLTGW---G---------------------VGEN-HW------------------GGLAERARVKGDWLVALPAG 115 (324)
T ss_dssp TTCEEEEECT---T---------------------BTTT-BC------------------CSSBSEEEECGGGCEECCTT
T ss_pred CCCEEEEccc---c---------------------cCCC-CC------------------CceeeEEecCHHHcEECCCC
Confidence 9999987531 0 1111 23 39999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhh--hcCCCCCCC-EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE
Q 017431 159 APLDKVCLLGCGVPTGLGAVW--NTAKVEPGS-IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 234 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~--~~~~~~~g~-~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~ 234 (371)
+++++||++++.++|||.++. ...++++++ +|||+|+ |++|++++|+|+++|+ +|+++++++++.++++++|+++
T Consensus 116 ~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~ 194 (324)
T 3nx4_A 116 LSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSLGANR 194 (324)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTCSE
T ss_pred CCHHHHHHhhhHHHHHHHHHHHhhhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCE
Confidence 999999999999999999875 345566632 4999998 9999999999999999 8999999999999999999999
Q ss_pred EecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeee
Q 017431 235 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTA 313 (371)
Q Consensus 235 vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~ 313 (371)
++++++. +. +++++++++|++|||+|++ .++.++++++++ |+++.+|.... ...+++...+ .+++++.|+.
T Consensus 195 vi~~~~~--~~---~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~~~g~~ 266 (324)
T 3nx4_A 195 ILSRDEF--AE---SRPLEKQLWAGAIDTVGDK-VLAKVLAQMNYG-GCVAACGLAGG-FALPTTVMPFILRNVRLQGVD 266 (324)
T ss_dssp EEEGGGS--SC---CCSSCCCCEEEEEESSCHH-HHHHHHHTEEEE-EEEEECCCTTC-SEEEEESHHHHHHCCEEEECC
T ss_pred EEecCCH--HH---HHhhcCCCccEEEECCCcH-HHHHHHHHHhcC-CEEEEEecCCC-CCCCCCHHHHhhcCeEEEEEe
Confidence 9988662 22 4556666999999999985 799999999996 99999998542 3344444444 3488999886
Q ss_pred cCCCcc---cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecC
Q 017431 314 FGGFKS---RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 370 (371)
Q Consensus 314 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~ 370 (371)
...... .+.++.++++++++++++ . +++|+|+++++|++.+.+++.. |+||+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~l~~~g~l~~--~-~~~~~l~~~~~A~~~~~~~~~~gkvvv~~~ 324 (324)
T 3nx4_A 267 SVMTPPARRAEAWARLVKDLPESFYAQ--A-ATEITLADAPKFADAIINNQVQGRTLVKIK 324 (324)
T ss_dssp STTCCHHHHHHHHHHHHHHSCHHHHHH--H-EEEEEGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred ccccChHHHHHHHHHHHHHHHcCCCCC--C-ceeEeHHHHHHHHHHHHhCCCCceEEEecC
Confidence 543211 245778888888888753 4 8999999999999999998886 9999875
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-50 Score=373.75 Aligned_cols=313 Identities=14% Similarity=0.115 Sum_probs=258.8
Q ss_pred CcceEEee--cC---CCCeEEEEe---------eCCCCCCCeEEEEEeeeecCccccccccCCCCCC-CCCcccccceeE
Q 017431 1 MCKAAVAW--EP---NKPLVIEDV---------QVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAG 65 (371)
Q Consensus 1 ~~~a~~~~--~~---~~~~~~~~~---------~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~-~~p~v~G~e~~G 65 (371)
||||+++. ++ .+.+++++. |.|+|.++||+|||++++||++|++.+.|.++.. ++|.++|||++|
T Consensus 10 ~mka~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G 89 (349)
T 3pi7_A 10 EMKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGRPAGFEGVG 89 (349)
T ss_dssp EEEEEEECSCBSCSSCCCSCCCCSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSSCBCTTSBCCSEEEE
T ss_pred hheEEEEEccccCCCcccceEEEeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCCCCCCCCCCccceEEE
Confidence 48999999 33 234888888 9999999999999999999999999999987543 689999999999
Q ss_pred EEEEeCCCC-CCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeee
Q 017431 66 IVESVGEGV-TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQY 144 (371)
Q Consensus 66 ~V~~~G~~v-~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~ 144 (371)
+|+++|++| ++|++||||++... .. .+ |+|+||
T Consensus 90 ~V~~vG~~v~~~~~vGdrV~~~~g---------------------------~~-~~------------------G~~aey 123 (349)
T 3pi7_A 90 TIVAGGDEPYAKSLVGKRVAFATG---------------------------LS-NW------------------GSWAEY 123 (349)
T ss_dssp EEEEECSSHHHHHHTTCEEEEECT---------------------------TS-SC------------------CSSBSE
T ss_pred EEEEECCCccCCCCCCCEEEEecc---------------------------CC-CC------------------ccceee
Confidence 999999999 99999999986421 00 23 399999
Q ss_pred EEecccceEecCCCCCcchhhhccccchhhhhhhhhcCCCCCC-CEEEEEc-CChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 145 TVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPG-SIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 145 ~~v~~~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g-~~VlI~G-ag~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
++++++.++++|+++++++||++++.++|||++ .+..+ ++| ++|||+| +|++|++++|+|+.+|+ +|++++++++
T Consensus 124 ~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~-~~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga-~Vi~~~~~~~ 200 (349)
T 3pi7_A 124 AVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAM-FDIVK-QEGEKAFVMTAGASQLCKLIIGLAKEEGF-RPIVTVRRDE 200 (349)
T ss_dssp EEEEGGGEEECCTTCCC--GGGSSHHHHHHHHH-HHHHH-HHCCSEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESCGG
T ss_pred EeechHHeEECCCCCCHHHHhhccccHHHHHHH-HHHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence 999999999999999999999999999999964 45566 666 7899985 59999999999999999 9999999999
Q ss_pred hHHHHHhcCCcEEecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccc-
Q 017431 223 KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP- 300 (371)
Q Consensus 223 ~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~- 300 (371)
++++++++|+++++++.+ .++.+.+++.+++ ++|++|||+|++. +..++++++++ |+++.+|.... ....++.
T Consensus 201 ~~~~~~~~Ga~~~~~~~~--~~~~~~v~~~~~~~g~D~vid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~ 275 (349)
T 3pi7_A 201 QIALLKDIGAAHVLNEKA--PDFEATLREVMKAEQPRIFLDAVTGPL-ASAIFNAMPKR-ARWIIYGRLDP-DATVIREP 275 (349)
T ss_dssp GHHHHHHHTCSEEEETTS--TTHHHHHHHHHHHHCCCEEEESSCHHH-HHHHHHHSCTT-CEEEECCCSCC-SCCCCSCT
T ss_pred HHHHHHHcCCCEEEECCc--HHHHHHHHHHhcCCCCcEEEECCCChh-HHHHHhhhcCC-CEEEEEeccCC-CCCCCCch
Confidence 999999999999999887 7888999999987 9999999999855 78999999996 99999987532 2334444
Q ss_pred hhe-eeceEEEeeecCCCc------ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCeeEEEEec
Q 017431 301 FQL-VTGRVWKGTAFGGFK------SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 369 (371)
Q Consensus 301 ~~~-~~~~~~~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~kvvl~~ 369 (371)
..+ .+++++.++....+. ..++++++++++++++++ ++++++|+|+++++|++.+.++...|+||++
T Consensus 276 ~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~gKvvl~p 349 (349)
T 3pi7_A 276 GQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGRWS--TDVTAVVPLAEAIAWVPAELTKPNGKVFIRP 349 (349)
T ss_dssp HHHHHSCCEEEECCHHHHHHHTHHHHHHHHHHC-CTTTTSSCC--C-CCEEEEHHHHHHHHHHHHTSSSSCEEEEC
T ss_pred hhhhccccEEEEEEehhhhhhCcHHHHHHHHHHHHHHHcCCcc--cccceEEcHHHHHHHHHHHhCCCCceEEEeC
Confidence 333 348899988764421 134677888889999875 5688999999999999966665555999875
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-46 Score=348.17 Aligned_cols=307 Identities=17% Similarity=0.190 Sum_probs=259.1
Q ss_pred CcceEEeec--C----CCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccc----eeEEEEEe
Q 017431 1 MCKAAVAWE--P----NKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE----AAGIVESV 70 (371)
Q Consensus 1 ~~~a~~~~~--~----~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e----~~G~V~~~ 70 (371)
||||+++.+ + .+.++++++|.|+|.++||+|||++++||++|+..+.+... ..+|.++||| ++|+|++.
T Consensus 7 ~mka~v~~~~~~g~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~~-~~~p~~~G~e~g~~~~G~V~~~ 85 (336)
T 4b7c_A 7 INRQYQLAQRPSGLPGRDTFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARS-YIPPVGIGEVMRALGVGKVLVS 85 (336)
T ss_dssp EEEEEEECSCCSSSCCTTSEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHHSCSCC-SSCCCCTTSBCCCEEEEEEEEE
T ss_pred cccEEEEEecCCCCCCCCceEEEeccCCCCCCCEEEEEEEEEEeCHHHHhhhhcccc-cCCCCCCCcccCCceEEEEEec
Confidence 489999986 1 23499999999999999999999999999999987776432 2457777887 79999995
Q ss_pred CCCCCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEeccc
Q 017431 71 GEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV 150 (371)
Q Consensus 71 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~ 150 (371)
++++|++||||+.. |+|+||+.+|++
T Consensus 86 --~v~~~~vGdrV~~~----------------------------------------------------G~~aey~~v~~~ 111 (336)
T 4b7c_A 86 --KHPGFQAGDYVNGA----------------------------------------------------LGVQDYFIGEPK 111 (336)
T ss_dssp --CSTTCCTTCEEEEE----------------------------------------------------CCSBSEEEECCT
T ss_pred --CCCCCCCCCEEecc----------------------------------------------------CCceEEEEechH
Confidence 47899999999732 299999999999
Q ss_pred ceEecCCCCCcchh--hhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 017431 151 SVAKIDPQAPLDKV--CLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 227 (371)
Q Consensus 151 ~v~~lP~~~~~~~a--a~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~ 227 (371)
.++++|+++++.++ |+++++++|||+++.+..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.+
T Consensus 112 ~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~ 190 (336)
T 4b7c_A 112 GFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFL 190 (336)
T ss_dssp TCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHH
T ss_pred HeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Confidence 99999999988886 7889999999999989999999999999998 9999999999999999 999999999999998
Q ss_pred -HhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCC-----Ccccccch
Q 017431 228 -KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG-----QEISTRPF 301 (371)
Q Consensus 228 -~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~-----~~~~~~~~ 301 (371)
+++|+++++++.+ .++.+.+.+.+++++|++||++|+ ..++.++++++++ |+++.+|..... ....++..
T Consensus 191 ~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~ 266 (336)
T 4b7c_A 191 VEELGFDGAIDYKN--EDLAAGLKRECPKGIDVFFDNVGG-EILDTVLTRIAFK-ARIVLCGAISQYNNKEAVRGPANYL 266 (336)
T ss_dssp HHTTCCSEEEETTT--SCHHHHHHHHCTTCEEEEEESSCH-HHHHHHHTTEEEE-EEEEECCCGGGGC------CCTTTT
T ss_pred HHHcCCCEEEECCC--HHHHHHHHHhcCCCceEEEECCCc-chHHHHHHHHhhC-CEEEEEeecccccCCcccccchhHH
Confidence 8999999999877 778888999886699999999998 6699999999996 999999875410 11233333
Q ss_pred hee-eceEEEeeecCCCc--ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 302 QLV-TGRVWKGTAFGGFK--SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 302 ~~~-~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
.+. +++++.|+....+. ..+++++++++++++++++. +..+|+|+++++|++.+.+++.. |+||++
T Consensus 267 ~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~ 336 (336)
T 4b7c_A 267 SLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSR--EDIVEGLETFPETLLKLFSGENFGKLVLKV 336 (336)
T ss_dssp HHHHTTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCC--EEEEECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred HHHhCCcEEEEEEhhhhhhhhHHHHHHHHHHHHCCCcccc--eeeecCHHHHHHHHHHHHcCCCCceEEEeC
Confidence 333 48899998765432 12568899999999998866 44568999999999999998876 999975
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-46 Score=352.48 Aligned_cols=312 Identities=19% Similarity=0.231 Sum_probs=252.6
Q ss_pred CcceEEeecCCCC--eEE-EEeeCCCC-CCCeEEEEEeeeecCccccccccCCCC-------------C--CCCCccccc
Q 017431 1 MCKAAVAWEPNKP--LVI-EDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDP-------------E--GLFPCILGH 61 (371)
Q Consensus 1 ~~~a~~~~~~~~~--~~~-~~~~~~~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~-------------~--~~~p~v~G~ 61 (371)
+|||+++.+++.+ +++ +++|.|+| .++||+|||++++||++|++.+.|..+ . .++|.++||
T Consensus 21 ~mka~~~~~~g~~~~l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~P~v~G~ 100 (375)
T 2vn8_A 21 QSMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLTLGR 100 (375)
T ss_dssp CEEEEEBSSCCSGGGCEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTCSBCCCC
T ss_pred cceeEEeccCCCccceEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccCCcccce
Confidence 5899999999865 889 99999985 999999999999999999999988532 1 237999999
Q ss_pred ceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcce
Q 017431 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTF 141 (371)
Q Consensus 62 e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~ 141 (371)
|++|+|+++|+++++|++||||++.+.. . .+ |+|
T Consensus 101 E~~G~V~~vG~~V~~~~vGDrV~~~~~~---------------------------~-~~------------------G~~ 134 (375)
T 2vn8_A 101 DVSGVVMECGLDVKYFKPGDEVWAAVPP---------------------------W-KQ------------------GTL 134 (375)
T ss_dssp EEEEEEEEECTTCCSCCTTCEEEEECCT---------------------------T-SC------------------CSS
T ss_pred eeeEEEEEeCCCCCCCCCCCEEEEecCC---------------------------C-CC------------------ccc
Confidence 9999999999999999999999865310 0 22 399
Q ss_pred eeeEEecccceEecCCCCCcchhhhccccchhhhhhhhhcCC----CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEE
Q 017431 142 SQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAK----VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIG 216 (371)
Q Consensus 142 a~~~~v~~~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~----~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~ 216 (371)
+||++++++.++++|+++++++||+++++++|||+++.+.++ +++|++|||+|+ |++|++++|+|+.+|+ +|++
T Consensus 135 aey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga-~Vi~ 213 (375)
T 2vn8_A 135 SEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDA-HVTA 213 (375)
T ss_dssp BSEEEEEGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEE
T ss_pred eeEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCC-EEEE
Confidence 999999999999999999999999999999999999987888 999999999985 9999999999999999 8988
Q ss_pred EcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCH-HHHHHHHHHhccCCceEEEEccCCCCCc
Q 017431 217 IDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV-SVMRAALECCHKGWGTSVIVGVAASGQE 295 (371)
Q Consensus 217 v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~-~~~~~~~~~l~~~~G~iv~~g~~~~~~~ 295 (371)
++ ++++.++++++|++.++++.+ .++.+.+.+. +++|++|||+|++ ..+..++++++++ |+++.+|.......
T Consensus 214 ~~-~~~~~~~~~~lGa~~v~~~~~--~~~~~~~~~~--~g~D~vid~~g~~~~~~~~~~~~l~~~-G~iv~~g~~~~~~~ 287 (375)
T 2vn8_A 214 VC-SQDASELVRKLGADDVIDYKS--GSVEEQLKSL--KPFDFILDNVGGSTETWAPDFLKKWSG-ATYVTLVTPFLLNM 287 (375)
T ss_dssp EE-CGGGHHHHHHTTCSEEEETTS--SCHHHHHHTS--CCBSEEEESSCTTHHHHGGGGBCSSSC-CEEEESCCSHHHHH
T ss_pred Ee-ChHHHHHHHHcCCCEEEECCc--hHHHHHHhhc--CCCCEEEECCCChhhhhHHHHHhhcCC-cEEEEeCCCccccc
Confidence 87 578889999999999999876 5666666553 3899999999996 4568899999996 99999986421100
Q ss_pred ----ccccc----hhe-e-------eceEEEeeecCCCcccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhC
Q 017431 296 ----ISTRP----FQL-V-------TGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHG 359 (371)
Q Consensus 296 ----~~~~~----~~~-~-------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~ 359 (371)
+.... ..+ . ++..+..... ....++++++++++++++++ +.++++|+|+++++|++.+.+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~ 363 (375)
T 2vn8_A 288 DRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFF--MASGPCLDDIAELVDAGKIR--PVIEQTFPFSKVPEAFLKVER 363 (375)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEECCC--CCCHHHHHHHHHHHHTTSCC--CCEEEEEEGGGHHHHHHHHHH
T ss_pred ccccccchhheeehhhccccccccccCcceEEEEe--CCCHHHHHHHHHHHHCCCcc--cCcCeEECHHHHHHHHHHHHc
Confidence 00000 011 1 1122221111 11235679999999999975 568899999999999999988
Q ss_pred CCee-EEEEec
Q 017431 360 GDCL-RCVLKM 369 (371)
Q Consensus 360 ~~~~-kvvl~~ 369 (371)
++.. |+||++
T Consensus 364 ~~~~gKvvi~~ 374 (375)
T 2vn8_A 364 GHARGKTVINV 374 (375)
T ss_dssp CCCSSEEEEEC
T ss_pred CCCCCeEEEEe
Confidence 8765 999986
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-47 Score=354.31 Aligned_cols=315 Identities=19% Similarity=0.233 Sum_probs=250.8
Q ss_pred CcceEEeecCCC--CeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCC
Q 017431 1 MCKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEV 77 (371)
Q Consensus 1 ~~~a~~~~~~~~--~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~ 77 (371)
+|||+++.+++. .+++++.|.|+|.++||+|||++++||++|++.+.|..+. ..+|.++|||++|+|+++| +++|
T Consensus 4 ~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~~~--v~~~ 81 (330)
T 1tt7_A 4 LFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVSSN--DPRF 81 (330)
T ss_dssp EEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEECS--STTC
T ss_pred cceEEEEecCCCCcceeEeecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCCCcCCCCccccceEEEEEEEcC--CCCC
Confidence 489999999873 4999999999999999999999999999999999987543 2579999999999999974 5789
Q ss_pred CCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCC
Q 017431 78 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 157 (371)
Q Consensus 78 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~ 157 (371)
++||||++.+. .+|.. .+ |+|+||++++++.++++|+
T Consensus 82 ~vGdrV~~~~~------------------------~~g~~-~~------------------G~~aey~~v~~~~~~~iP~ 118 (330)
T 1tt7_A 82 AEGDEVIATSY------------------------ELGVS-RD------------------GGLSEYASVPGDWLVPLPQ 118 (330)
T ss_dssp CTTCEEEEEST------------------------TBTTT-BC------------------CSSBSSEEECGGGEEECCT
T ss_pred CCCCEEEEccc------------------------ccCCC-CC------------------ccceeEEEecHHHeEECCC
Confidence 99999986531 01111 22 3999999999999999999
Q ss_pred CCCcchhhhccccchhhhhhhh--hcCCCCCCC-EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCc
Q 017431 158 QAPLDKVCLLGCGVPTGLGAVW--NTAKVEPGS-IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 233 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~ta~~~l~--~~~~~~~g~-~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~ 233 (371)
++++++||++++++.|||.++. ...++++|+ +|||+|+ |++|++++|+|+.+|+ +|++++++++++++++++|++
T Consensus 119 ~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa~ 197 (330)
T 1tt7_A 119 NLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGAS 197 (330)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTCS
T ss_pred CCCHHHHhhccchHHHHHHHHHHHHhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCc
Confidence 9999999999999999998774 346788986 9999998 9999999999999999 799999999999999999999
Q ss_pred EEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEee
Q 017431 234 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGT 312 (371)
Q Consensus 234 ~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~ 312 (371)
+++++.+ .+ .+.+++.+++++|++|||+|+ ..++.++++++++ |+++.+|.... ...+++...+ .+++++.|+
T Consensus 198 ~v~~~~~--~~-~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~i~g~ 271 (330)
T 1tt7_A 198 EVISRED--VY-DGTLKALSKQQWQGAVDPVGG-KQLASLLSKIQYG-GSVAVSGLTGG-GEVPATVYPFILRGVSLLGI 271 (330)
T ss_dssp EEEEHHH--HC-SSCCCSSCCCCEEEEEESCCT-HHHHHHHTTEEEE-EEEEECCCSSC-SCEEECSHHHHTSCCEEEEC
T ss_pred EEEECCC--ch-HHHHHHhhcCCccEEEECCcH-HHHHHHHHhhcCC-CEEEEEecCCC-CccCcchHHHHhcCeEEEEE
Confidence 9887543 11 112333444489999999999 5799999999996 99999987542 2334443333 348888887
Q ss_pred ecCCCc---ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 313 AFGGFK---SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 313 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
...... ..+.++.+++++.++++ +++++++|+|+++++|++.+.+++.. |+||++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~g~l--~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~ 330 (330)
T 1tt7_A 272 DSVYCPMDVRAAVWERMSSDLKPDQL--LTIVDREVSLEETPGALKDILQNRIQGRVIVKL 330 (330)
T ss_dssp CSSSCCHHHHHHHHHHTTTTSCCSCS--TTSEEEEECSTTHHHHHHHTTTTCCSSEEEECC
T ss_pred eccccCHHHHHHHHHHHHHHHhcCCc--ccccceEEcHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 532211 11234455555556665 46678999999999999999888765 999864
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-47 Score=350.51 Aligned_cols=314 Identities=17% Similarity=0.240 Sum_probs=246.5
Q ss_pred CcceEEeecCCC--CeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCC
Q 017431 1 MCKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEV 77 (371)
Q Consensus 1 ~~~a~~~~~~~~--~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~ 77 (371)
+|||+++.+++. .+++++.|.|+|.++||+|||++++||++|++.+.|..+. ..+|.++|||++|+|+++| +++|
T Consensus 3 ~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~~--v~~~ 80 (328)
T 1xa0_A 3 AFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVSSQ--HPRF 80 (328)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEECC--SSSC
T ss_pred cceEEEEecCCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCCCCCCCCcccCcceEEEEEecC--CCCC
Confidence 599999999884 3899999999999999999999999999999999886543 3579999999999999964 6789
Q ss_pred CCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCC
Q 017431 78 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 157 (371)
Q Consensus 78 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~ 157 (371)
++||||++.+. ..|.. .+ |+|+||+.+|++.++++|+
T Consensus 81 ~vGdrV~~~~~------------------------~~g~~-~~------------------G~~aey~~v~~~~~~~~P~ 117 (328)
T 1xa0_A 81 REGDEVIATGY------------------------EIGVT-HF------------------GGYSEYARLHGEWLVPLPK 117 (328)
T ss_dssp CTTCEEEEEST------------------------TBTTT-BC------------------CSSBSEEEECGGGCEECCT
T ss_pred CCCCEEEEccc------------------------cCCCC-CC------------------ccceeEEEechHHeEECCC
Confidence 99999986531 01110 22 3999999999999999999
Q ss_pred CCCcchhhhccccchhhhhhhh--hcCCCCCCC-EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCc
Q 017431 158 QAPLDKVCLLGCGVPTGLGAVW--NTAKVEPGS-IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 233 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~ta~~~l~--~~~~~~~g~-~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~ 233 (371)
++++++||++++++.|||.++. +..++++|+ +|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++++|++
T Consensus 118 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa~ 196 (328)
T 1xa0_A 118 GLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGAK 196 (328)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTCS
T ss_pred CCCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCc
Confidence 9999999999999999998774 346788986 9999998 9999999999999999 799999999999999999999
Q ss_pred EEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEee
Q 017431 234 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGT 312 (371)
Q Consensus 234 ~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~ 312 (371)
+++++.+ .+ .+.+++.+++++|++|||+|+ ..++.++++++++ |+++.+|... ....+++...+ .+++++.|+
T Consensus 197 ~~i~~~~--~~-~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~G~~~-~~~~~~~~~~~~~~~~~i~g~ 270 (328)
T 1xa0_A 197 EVLARED--VM-AERIRPLDKQRWAAAVDPVGG-RTLATVLSRMRYG-GAVAVSGLTG-GAEVPTTVHPFILRGVSLLGI 270 (328)
T ss_dssp EEEECC------------CCSCCEEEEEECSTT-TTHHHHHHTEEEE-EEEEECSCCS-SSCCCCCSHHHHHTTCEEEEC
T ss_pred EEEecCC--cH-HHHHHHhcCCcccEEEECCcH-HHHHHHHHhhccC-CEEEEEeecC-CCCCCCchhhhhhcCceEEEE
Confidence 9998765 22 234455554589999999999 5699999999996 9999998753 22334443333 348888887
Q ss_pred ecCCCcc---cCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecC
Q 017431 313 AFGGFKS---RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 370 (371)
Q Consensus 313 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~ 370 (371)
....... .+.++.+++++.++ ++ + ++++|+|+++++|++.+++++.. |+||+++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~g-l~--~-~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~ 328 (328)
T 1xa0_A 271 DSVYCPMDLRLRIWERLAGDLKPD-LE--R-IAQEISLAELPQALKRILRGELRGRTVVRLA 328 (328)
T ss_dssp CSSSCCHHHHHHHHHHHHTTTCCC-HH--H-HEEEEEGGGHHHHHHHHHHTCCCSEEEEECC
T ss_pred ecccCCHHHHHHHHHHHHHHHHcC-Cc--e-eeeEeCHHHHHHHHHHHHcCCCCCeEEEEeC
Confidence 4322111 12344455555445 33 3 46999999999999999887765 9999874
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-47 Score=359.36 Aligned_cols=311 Identities=16% Similarity=0.164 Sum_probs=253.1
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCC-----------------------------
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP----------------------------- 51 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~----------------------------- 51 (371)
+|||++......+++++++|.|+|.++||+|||++++||++|++.+.|.++
T Consensus 7 ~mka~v~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~~~~~ 86 (379)
T 3iup_A 7 QLRSRIKSSGELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMRSMAG 86 (379)
T ss_dssp EEEEEECTTSEEEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHHHHGG
T ss_pred hHHHHHhcCCCCceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCcccccccccc
Confidence 388888865545599999999999999999999999999999999888531
Q ss_pred CCCCCcccccceeEEEEEeCCCC-CCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCc
Q 017431 52 EGLFPCILGHEAAGIVESVGEGV-TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGK 130 (371)
Q Consensus 52 ~~~~p~v~G~e~~G~V~~~G~~v-~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~ 130 (371)
..++|.++|||++|+|+++|++| ++|++||||++.+ +
T Consensus 87 ~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~~--------------------------------~---------- 124 (379)
T 3iup_A 87 RLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIG--------------------------------G---------- 124 (379)
T ss_dssp GTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEECC--------------------------------S----------
T ss_pred ccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEecC--------------------------------C----------
Confidence 22578999999999999999999 8899999998542 2
Q ss_pred ceeeccCCcceeeeEEecccceEecCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEE--cCChHHHHHHHHHHH
Q 017431 131 PIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF--GLGTVGLAVAEGAKA 208 (371)
Q Consensus 131 ~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~--Gag~vG~~ai~la~~ 208 (371)
|+|+||++++++.++++|+++++++||++++.++|||+++ +... ++|++|||+ |+|++|++++|+|+.
T Consensus 125 --------G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~-~~~~-~~g~~vlV~gag~G~vG~~a~q~a~~ 194 (379)
T 3iup_A 125 --------AMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMV-ETMR-LEGHSALVHTAAASNLGQMLNQICLK 194 (379)
T ss_dssp --------CCSBSEEEEEGGGEEECCTTCCHHHHTTSSHHHHHHHHHH-HHHH-HTTCSCEEESSTTSHHHHHHHHHHHH
T ss_pred --------CcceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHH-HHhc-cCCCEEEEECCCCCHHHHHHHHHHHH
Confidence 3999999999999999999999999999999999999765 4444 899999999 559999999999999
Q ss_pred cCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhc-----cC--
Q 017431 209 AGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCH-----KG-- 280 (371)
Q Consensus 209 ~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~-----~~-- 280 (371)
+|+ +|++++++++|.++++++|+++++++.+ .++.+.+++.+++ ++|++|||+|++.+.+.++++++ ++
T Consensus 195 ~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~~~~--~~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~ 271 (379)
T 3iup_A 195 DGI-KLVNIVRKQEQADLLKAQGAVHVCNAAS--PTFMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSARE 271 (379)
T ss_dssp HTC-CEEEEESSHHHHHHHHHTTCSCEEETTS--TTHHHHHHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCS
T ss_pred CCC-EEEEEECCHHHHHHHHhCCCcEEEeCCC--hHHHHHHHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhccccc
Confidence 999 8999999999999999999999999887 7889999999988 99999999999777888888885 42
Q ss_pred --------CceEEEEccCCCCCcccccchheeeceEEEeeecCCCc---ccCc----HHHHHHHHHcCCCCCCCceeeee
Q 017431 281 --------WGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFK---SRSQ----VPWLVDKYMKKEIKVDEYVTHNM 345 (371)
Q Consensus 281 --------~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~---~~~~----~~~~~~~~~~~~~~~~~~i~~~~ 345 (371)
.|+++.+|... ....++.. .+.+++++.|+.+..+. ..++ ++.+++++.+ . +.++++++|
T Consensus 272 ~~~~G~~~~g~iv~~G~~~-~~~~~~~~-~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--l~~~i~~~~ 346 (379)
T 3iup_A 272 YSRYGSTTHKQVYLYGGLD-TSPTEFNR-NFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKT-T--FASHYSKEI 346 (379)
T ss_dssp CCTTCCCSCEEEEECCCSE-EEEEEECC-CSCSCEEEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT-T--TCCCCSEEE
T ss_pred eeecccccCceEEEecCCC-CCcccccc-ccccceEEEEEEeeeecccCCHHHHHHHHHHHHHHHhc-c--CCCcceEEe
Confidence 04555554422 12222221 23447888888765431 1122 3445555554 3 556788999
Q ss_pred ecccH--HHHHHHHhCCCee-EEEEecCC
Q 017431 346 TLGEI--NEAFRYMHGGDCL-RCVLKMQD 371 (371)
Q Consensus 346 ~~~~~--~~A~~~~~~~~~~-kvvl~~~d 371 (371)
+|+++ ++|++.+.+++.. |+||+++.
T Consensus 347 ~l~~~~~~~A~~~l~~~~~~gKvVv~~~~ 375 (379)
T 3iup_A 347 SLAEVLDLDMIAVYNKRATGEKYLINPNK 375 (379)
T ss_dssp EHHHHTCHHHHHHHTTCCTTCCEEEETTT
T ss_pred cHHHhhhHHHHHHHhcCCCCceEEEeCCC
Confidence 99999 9999999998776 99999863
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-45 Score=341.84 Aligned_cols=311 Identities=17% Similarity=0.248 Sum_probs=259.0
Q ss_pred CcceEEe-ecC---CC----CeEEEEeeCCCC-CCCeEEEEEeeeecCccccccccC----CCC-CCCCCcccccceeEE
Q 017431 1 MCKAAVA-WEP---NK----PLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSG----KDP-EGLFPCILGHEAAGI 66 (371)
Q Consensus 1 ~~~a~~~-~~~---~~----~~~~~~~~~~~~-~~~eVlV~v~~~~i~~~D~~~~~g----~~~-~~~~p~v~G~e~~G~ 66 (371)
+|||+++ ..+ |. .++++++|.|+| .++||+|||.+++||++|++.+.+ .+. ...+|.++|||++|+
T Consensus 8 ~mka~v~~~~~~~~g~p~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~G~E~~G~ 87 (357)
T 2zb4_A 8 IVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIGI 87 (357)
T ss_dssp EEEEEEECCCCCTTSCCCGGGEEEEEEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBCEEEEEEE
T ss_pred cceEEEEeccCCCCCCCCcCceEEEeecCCCCCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCccccccEEEE
Confidence 5899999 565 43 399999999999 999999999999999999987775 232 235789999999999
Q ss_pred EEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEE
Q 017431 67 VESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTV 146 (371)
Q Consensus 67 V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~ 146 (371)
|++ +++++|++||||++. + |+|+||++
T Consensus 88 V~~--~~v~~~~vGdrV~~~---------------------------------~------------------G~~aey~~ 114 (357)
T 2zb4_A 88 IEE--SKHTNLTKGDFVTSF---------------------------------Y------------------WPWQTKVI 114 (357)
T ss_dssp EEE--ECSTTCCTTCEEEEE---------------------------------E------------------EESBSEEE
T ss_pred EEe--cCCCCCCCCCEEEec---------------------------------C------------------CCcEEEEE
Confidence 999 889999999999743 1 39999999
Q ss_pred ecccceEecCCCC-----CcchhhhccccchhhhhhhhhcCCCCCC--CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc
Q 017431 147 VHDVSVAKIDPQA-----PLDKVCLLGCGVPTGLGAVWNTAKVEPG--SIVAVFGL-GTVGLAVAEGAKAAGASRVIGID 218 (371)
Q Consensus 147 v~~~~v~~lP~~~-----~~~~aa~~~~~~~ta~~~l~~~~~~~~g--~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~ 218 (371)
++++.++++|+++ +++ +|+++.+++|||+++.+..++++| ++|||+|+ |++|++++|+++..|+++|++++
T Consensus 115 v~~~~~~~iP~~~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~ 193 (357)
T 2zb4_A 115 LDGNSLEKVDPQLVDGHLSYF-LGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGIC 193 (357)
T ss_dssp EEGGGCEECCGGGGTTCGGGG-GTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEE
T ss_pred EchHHceecCcccccCchhHH-HHhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEe
Confidence 9999999999999 544 778888999999999888999999 99999998 99999999999999997899999
Q ss_pred CChhhHHHHHh-cCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCC-Ccc
Q 017431 219 IDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG-QEI 296 (371)
Q Consensus 219 ~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~-~~~ 296 (371)
+++++.+.+++ +|++.++++.+ .++.+.+.+.+++++|++||++|+ ..++.++++++++ |+++.+|..... ..+
T Consensus 194 ~~~~~~~~~~~~~g~~~~~d~~~--~~~~~~~~~~~~~~~d~vi~~~G~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~ 269 (357)
T 2zb4_A 194 GTHEKCILLTSELGFDAAINYKK--DNVAEQLRESCPAGVDVYFDNVGG-NISDTVISQMNEN-SHIILCGQISQYNKDV 269 (357)
T ss_dssp SCHHHHHHHHHTSCCSEEEETTT--SCHHHHHHHHCTTCEEEEEESCCH-HHHHHHHHTEEEE-EEEEECCCGGGTTSCC
T ss_pred CCHHHHHHHHHHcCCceEEecCc--hHHHHHHHHhcCCCCCEEEECCCH-HHHHHHHHHhccC-cEEEEECCccccccCc
Confidence 99999888876 99999998876 677788888876689999999997 6799999999996 999999875321 122
Q ss_pred cccc-------hh-eeeceEEEeeecCCCc--ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EE
Q 017431 297 STRP-------FQ-LVTGRVWKGTAFGGFK--SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RC 365 (371)
Q Consensus 297 ~~~~-------~~-~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kv 365 (371)
++.+ .. +.+++++.++....+. ..+++++++++++++++++. +..+|+|+++++|++.+.+++.. |+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~gKv 347 (357)
T 2zb4_A 270 PYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIK--ETVINGLENMGAAFQSMMTGGNIGKQ 347 (357)
T ss_dssp CSSCCCCHHHHHHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTCCCCC--EEEEECGGGHHHHHHHHHTTCCSBEE
T ss_pred cccccchhhhhhhhhcceeEEEEeehhhhhHHHHHHHHHHHHHHHcCCCcCc--cceecCHHHHHHHHHHHHcCCCCceE
Confidence 2221 12 2347888887653321 13568899999999998865 34669999999999999988765 99
Q ss_pred EEecCC
Q 017431 366 VLKMQD 371 (371)
Q Consensus 366 vl~~~d 371 (371)
||++++
T Consensus 348 vi~~~~ 353 (357)
T 2zb4_A 348 IVCISE 353 (357)
T ss_dssp EEECCC
T ss_pred EEEEec
Confidence 999864
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-44 Score=331.62 Aligned_cols=294 Identities=20% Similarity=0.256 Sum_probs=243.1
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
|||+++.+++.+..+++.|.|+|.++||+|||++++||++|++.+.|.++. .++|.++|||++|+|+ |
T Consensus 1 Mka~~~~~~g~~~~l~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~-----------G 69 (302)
T 1iz0_A 1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVVE-----------G 69 (302)
T ss_dssp CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEET-----------T
T ss_pred CeEEEEcCCCCchheEECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcccceEEEEEE-----------C
Confidence 899999999987667799999999999999999999999999999987654 2689999999999998 9
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|||+..+ .+| +|+||++++++.++++|++++
T Consensus 70 drV~~~~-------------------------------~~G------------------~~aey~~v~~~~~~~iP~~~~ 100 (302)
T 1iz0_A 70 RRYAALV-------------------------------PQG------------------GLAERVAVPKGALLPLPEGLS 100 (302)
T ss_dssp EEEEEEC-------------------------------SSC------------------CSBSEEEEEGGGCEECCTTCC
T ss_pred cEEEEec-------------------------------CCc------------------ceeeEEEEcHHHcEeCCCCCC
Confidence 9998542 223 999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 239 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~ 239 (371)
+++||+++++++|||+++.+.. +++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++++|+++++++.
T Consensus 101 ~~~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~ 178 (302)
T 1iz0_A 101 PEEAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAATYA 178 (302)
T ss_dssp HHHHHTSHHHHHHHHHHHHHTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEEGG
T ss_pred HHHHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEECC
Confidence 9999999999999999997777 999999999998 9999999999999999 999999999999999999999988764
Q ss_pred CCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe-eeceEEEeeecCCC-
Q 017431 240 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGF- 317 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~- 317 (371)
+. .++.+.+ +++|++|| +|+ ..++.++++++++ |+++.+|..... ..+++...+ .+++++.|+.+..+
T Consensus 179 ~~-~~~~~~~-----~~~d~vid-~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~ 248 (302)
T 1iz0_A 179 EV-PERAKAW-----GGLDLVLE-VRG-KEVEESLGLLAHG-GRLVYIGAAEGE-VAPIPPLRLMRRNLAVLGFWLTPLL 248 (302)
T ss_dssp GH-HHHHHHT-----TSEEEEEE-CSC-TTHHHHHTTEEEE-EEEEEC--------CCCCTTHHHHTTCEEEECCHHHHT
T ss_pred cc-hhHHHHh-----cCceEEEE-CCH-HHHHHHHHhhccC-CEEEEEeCCCCC-CCCcCHHHHHhCCCeEEEEeccchh
Confidence 20 1233322 57999999 998 6799999999996 999999875321 123333333 34788888865322
Q ss_pred cccCcHHHHHH---HHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 318 KSRSQVPWLVD---KYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 318 ~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
...++++++++ ++.+++++ +.++++|+|+++++|++.+.+++.. |+++++
T Consensus 249 ~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 302 (302)
T 1iz0_A 249 REGALVEEALGFLLPRLGRELR--PVVGPVFPFAEAEAAFRALLDRGHTGKVVVRL 302 (302)
T ss_dssp TCHHHHHHHHHHHGGGBTTTBC--CCEEEEEEGGGHHHHHHHTTCTTCCBEEEEEC
T ss_pred hhHHHHHHHHhhhHHHHcCCcc--cccceEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 12356888899 99899875 5688999999999999999887765 999874
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-44 Score=367.98 Aligned_cols=302 Identities=23% Similarity=0.296 Sum_probs=254.3
Q ss_pred EEeecCCCC--eEEEEeeC--CCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 5 AVAWEPNKP--LVIEDVQV--APPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 5 ~~~~~~~~~--~~~~~~~~--~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
+.+..+|.+ +++.+.|. |+|.++||+|||+++|||++|++++.|.++ .|.++|||++|+|+++|++|++|++|
T Consensus 213 l~~~~~G~~~~L~~~~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~~~---~~~~lG~E~aG~V~~vG~~V~~~~vG 289 (795)
T 3slk_A 213 LEATRPGSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYP---GVASLGSEGAGVVVETGPGVTGLAPG 289 (795)
T ss_dssp EEESSTTSSTTEEECCCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTCCS---SCCCSCCCEEEEEEEECSSCCSSCTT
T ss_pred EecCCCCCccceEEEeCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCCCC---CCccccceeEEEEEEeCCCCCcCCCC
Confidence 455566644 88888775 568999999999999999999999999764 45679999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|||+.. .+ |+|++|++++.+.++++|++++
T Consensus 290 DrV~~~--------------------------------~~------------------G~~ae~~~v~~~~~~~iP~~ls 319 (795)
T 3slk_A 290 DRVMGM--------------------------------IP------------------KAFGPLAVADHRMVTRIPAGWS 319 (795)
T ss_dssp CEEEEC--------------------------------CS------------------SCSSSEEEEETTSEEECCTTCC
T ss_pred CEEEEE--------------------------------ec------------------CCCcCEEEeehHHEEECCCCCC
Confidence 999753 22 3999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 239 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~ 239 (371)
+++||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+||.+|+ +|+++++++ +.++++ +|+++++++.
T Consensus 320 ~~~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga-~V~~t~~~~-k~~~l~-lga~~v~~~~ 396 (795)
T 3slk_A 320 FARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGA-EVYATASED-KWQAVE-LSREHLASSR 396 (795)
T ss_dssp HHHHHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTC-CEEEECCGG-GGGGSC-SCGGGEECSS
T ss_pred HHHHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeChH-Hhhhhh-cChhheeecC
Confidence 99999999999999999999999999999999987 9999999999999999 899987665 556655 9999999988
Q ss_pred CCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCC-
Q 017431 240 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF- 317 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~- 317 (371)
+ .++.+.+++.|++ |+|+|||++++ +.++.++++++++ |+++.+|.........+... .++.++.++.+...
T Consensus 397 ~--~~~~~~i~~~t~g~GvDvVld~~gg-~~~~~~l~~l~~~-Gr~v~iG~~~~~~~~~~~~~--~~~~~~~~~~l~~~~ 470 (795)
T 3slk_A 397 T--CDFEQQFLGATGGRGVDVVLNSLAG-EFADASLRMLPRG-GRFLELGKTDVRDPVEVADA--HPGVSYQAFDTVEAG 470 (795)
T ss_dssp S--STHHHHHHHHSCSSCCSEEEECCCT-TTTHHHHTSCTTC-EEEEECCSTTCCCHHHHHHH--SSSEEEEECCGGGGH
T ss_pred C--hhHHHHHHHHcCCCCeEEEEECCCc-HHHHHHHHHhcCC-CEEEEeccccccCccccccc--CCCCEEEEeeccccC
Confidence 7 7899999999999 99999999998 5689999999996 99999997543222222111 23556665544211
Q ss_pred --cccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecC
Q 017431 318 --KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 370 (371)
Q Consensus 318 --~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~ 370 (371)
...+.+++++++++++++++ +++++|+++++++||+.+++++.. |+||++.
T Consensus 471 ~~~~~~~l~~~~~l~~~g~l~p--~~~~~~~l~~~~eA~~~l~~g~~~GKvVl~~~ 524 (795)
T 3slk_A 471 PQRIGEMLHELVELFEGRVLEP--LPVTAWDVRQAPEALRHLSQARHVGKLVLTMP 524 (795)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCC--CCEEEEEGGGHHHHHHHHHHTCCCBEEEEECC
T ss_pred HHHHHHHHHHHHHHHHcCCcCC--CcceeEcHHHHHHHHHHHhcCCccceEEEecC
Confidence 11346788999999999764 578999999999999999998887 9999875
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-41 Score=315.58 Aligned_cols=305 Identities=18% Similarity=0.201 Sum_probs=246.8
Q ss_pred CcceEEeecC--C----CCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCC
Q 017431 1 MCKAAVAWEP--N----KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGV 74 (371)
Q Consensus 1 ~~~a~~~~~~--~----~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v 74 (371)
+||++++.++ + +.++++++|.|+|.++||+|||++++||+.|.. +. ....+|.++|||++|+|++. ++
T Consensus 7 ~mka~~~~~~~~g~~~~~~l~~~e~~~P~~~~~eVlVkv~a~gi~~~~~~-~~---~~~~~p~~~g~e~~G~Vv~~--~v 80 (333)
T 1v3u_A 7 KAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRI-AS---KRLKEGAVMMGQQVARVVES--KN 80 (333)
T ss_dssp EEEEEEECC-----CCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHH-HT---TTCCTTSBCCCCEEEEEEEE--SC
T ss_pred cccEEEEeecCCCCCCccceEEEeCCCCCCCCCEEEEEEEEeccCHHHcc-cc---CcCCCCcccccceEEEEEec--CC
Confidence 4899999885 3 339999999999999999999999999998863 21 12246888999999999995 57
Q ss_pred CCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEe
Q 017431 75 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK 154 (371)
Q Consensus 75 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~ 154 (371)
++|++||||++. |+|++|++++.+.+++
T Consensus 81 ~~~~vGdrV~~~----------------------------------------------------g~~aey~~v~~~~~~~ 108 (333)
T 1v3u_A 81 SAFPAGSIVLAQ----------------------------------------------------SGWTTHFISDGKGLEK 108 (333)
T ss_dssp TTSCTTCEEEEC----------------------------------------------------CCSBSEEEESSTTEEE
T ss_pred CCCCCCCEEEec----------------------------------------------------CceEEEEEechHHeEE
Confidence 889999999742 2899999999999999
Q ss_pred cCCC----CCcch-hhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 017431 155 IDPQ----APLDK-VCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 228 (371)
Q Consensus 155 lP~~----~~~~~-aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~ 228 (371)
+|++ +++++ +|+++++++|||+++.+..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++
T Consensus 109 iP~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~ 187 (333)
T 1v3u_A 109 LLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLK 187 (333)
T ss_dssp CC--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHH
T ss_pred cCcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH
Confidence 9997 88887 58899999999999988899999999999998 9999999999999999 9999999999999999
Q ss_pred hcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCC----ccc-ccchhe
Q 017431 229 NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQ----EIS-TRPFQL 303 (371)
Q Consensus 229 ~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~----~~~-~~~~~~ 303 (371)
++|++.+++..+. .++.+.+.+.+++++|++||++|. ..++.++++++++ |+++.+|...... ... .+...+
T Consensus 188 ~~g~~~~~d~~~~-~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~ 264 (333)
T 1v3u_A 188 QIGFDAAFNYKTV-NSLEEALKKASPDGYDCYFDNVGG-EFLNTVLSQMKDF-GKIAICGAISVYNRMDQLPPGPSPESI 264 (333)
T ss_dssp HTTCSEEEETTSC-SCHHHHHHHHCTTCEEEEEESSCH-HHHHHHHTTEEEE-EEEEECCCCC-------CCBCCCHHHH
T ss_pred hcCCcEEEecCCH-HHHHHHHHHHhCCCCeEEEECCCh-HHHHHHHHHHhcC-CEEEEEeccccccCCCCCCCCcCHHHH
Confidence 9999888887542 456777777776689999999998 4589999999996 9999998753211 111 122223
Q ss_pred -eeceEEEeeecCCCc---ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEec
Q 017431 304 -VTGRVWKGTAFGGFK---SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 369 (371)
Q Consensus 304 -~~~~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~ 369 (371)
.+++++.|+....+. ..+++++++++++++++++... .+|+|+++++|++.+.+++.. |+||++
T Consensus 265 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~--~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 333 (333)
T 1v3u_A 265 IYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEH--VTKGFENMPAAFIEMLNGANLGKAVVTA 333 (333)
T ss_dssp HHTTCEEEECCGGGCCTHHHHHHHHHHHHHHHTTSSCCCEE--EEECGGGHHHHHHHHHTTCCSBEEEEEC
T ss_pred hhcCceEEEEehhhcchHHHHHHHHHHHHHHHCCCccCccc--cccCHHHHHHHHHHHHcCCCCceEEEeC
Confidence 347888887654331 1346778999999999887543 557999999999999887765 999874
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-41 Score=317.11 Aligned_cols=310 Identities=20% Similarity=0.228 Sum_probs=248.0
Q ss_pred cceEEeec-----CCC-CeEEE--EeeCCC-CCCCeEEEEEeeeecCccccccccCCCCC----CCCCcccccceeEEEE
Q 017431 2 CKAAVAWE-----PNK-PLVIE--DVQVAP-PQAGEVRIKILFTALCHTDAYTWSGKDPE----GLFPCILGHEAAGIVE 68 (371)
Q Consensus 2 ~~a~~~~~-----~~~-~~~~~--~~~~~~-~~~~eVlV~v~~~~i~~~D~~~~~g~~~~----~~~p~v~G~e~~G~V~ 68 (371)
||++++.. ++. .++++ ++|.|. |.++||+|||.++++|+.|. .+.|.+.. ..+|.++|||++|++.
T Consensus 5 mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~G~~~ 83 (345)
T 2j3h_A 5 NKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQGYGV 83 (345)
T ss_dssp EEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCEEEEE
T ss_pred ceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeeecceE
Confidence 67776654 342 38888 889886 89999999999999888774 44554422 1368899999999999
Q ss_pred E--eCCCCCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEE
Q 017431 69 S--VGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTV 146 (371)
Q Consensus 69 ~--~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~ 146 (371)
+ +|+++++|++||||+.. |+|++|+.
T Consensus 84 ~GvV~~~v~~~~vGdrV~~~----------------------------------------------------g~~aey~~ 111 (345)
T 2j3h_A 84 SRIIESGHPDYKKGDLLWGI----------------------------------------------------VAWEEYSV 111 (345)
T ss_dssp EEEEEECSTTCCTTCEEEEE----------------------------------------------------EESBSEEE
T ss_pred EEEEecCCCCCCCCCEEEee----------------------------------------------------cCceeEEE
Confidence 9 99999999999999732 28999999
Q ss_pred ecccc--eEecCC---CCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC
Q 017431 147 VHDVS--VAKIDP---QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID 220 (371)
Q Consensus 147 v~~~~--v~~lP~---~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~ 220 (371)
++++. ++++|+ +++++ +|+++++++|||+++.+..++++|++|||+|+ |++|++++|+++..|+ +|++++++
T Consensus 112 v~~~~~~~~~ip~~~~~~~~~-aa~l~~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~ 189 (345)
T 2j3h_A 112 ITPMTHAHFKIQHTDVPLSYY-TGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGS 189 (345)
T ss_dssp ECCCTTTCEEECCCSSCTTGG-GTTTSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred ecccccceeecCCCCCCHHHH-HHhccccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 99876 999996 35554 67888899999999988899999999999998 9999999999999999 89999999
Q ss_pred hhhHHHHH-hcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCC----Cc
Q 017431 221 PKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG----QE 295 (371)
Q Consensus 221 ~~~~~~~~-~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~----~~ 295 (371)
+++.+.++ ++|++.++++.+. .++.+.+.+.+++++|++||++|+ ..++.++++++++ |+++.+|..... ..
T Consensus 190 ~~~~~~~~~~~g~~~~~d~~~~-~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~ 266 (345)
T 2j3h_A 190 KEKVDLLKTKFGFDDAFNYKEE-SDLTAALKRCFPNGIDIYFENVGG-KMLDAVLVNMNMH-GRIAVCGMISQYNLENQE 266 (345)
T ss_dssp HHHHHHHHHTSCCSEEEETTSC-SCSHHHHHHHCTTCEEEEEESSCH-HHHHHHHTTEEEE-EEEEECCCGGGTTCSSCC
T ss_pred HHHHHHHHHHcCCceEEecCCH-HHHHHHHHHHhCCCCcEEEECCCH-HHHHHHHHHHhcC-CEEEEEccccccccCCcc
Confidence 99999998 7999998887652 356677777775589999999998 6799999999996 999999875321 12
Q ss_pred ccccchhee-eceEEEeeecCCCc--ccCcHHHHHHHHHcCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecCC
Q 017431 296 ISTRPFQLV-TGRVWKGTAFGGFK--SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQD 371 (371)
Q Consensus 296 ~~~~~~~~~-~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~d 371 (371)
..++...+. +++++.|+....+. ..+.++++++++++++++ +.+.++|+|+++++|++.+.+++.. |+||++++
T Consensus 267 ~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~i~--~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~ 344 (345)
T 2j3h_A 267 GVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKIT--YVEDVADGLEKAPEALVGLFHGKNVGKQVVVVAR 344 (345)
T ss_dssp CBSCTTHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSC--CCEEEEESGGGSHHHHHHHHTTCCSSEEEEESSC
T ss_pred ccccHHHHhhhceeeceeeehhhhhhHHHHHHHHHHHHHCCCCc--CcccccCCHHHHHHHHHHHHcCCCceEEEEEeCC
Confidence 233333333 47888887654321 122488899999999987 4566789999999999999988776 99999864
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-33 Score=314.38 Aligned_cols=291 Identities=16% Similarity=0.226 Sum_probs=235.8
Q ss_pred eEEEEeeCCC-CC--CCeEEEEEeeeecCccccccccCCCCCC-------CCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 017431 14 LVIEDVQVAP-PQ--AGEVRIKILFTALCHTDAYTWSGKDPEG-------LFPCILGHEAAGIVESVGEGVTEVQPGDHV 83 (371)
Q Consensus 14 ~~~~~~~~~~-~~--~~eVlV~v~~~~i~~~D~~~~~g~~~~~-------~~p~v~G~e~~G~V~~~G~~v~~~~~Gd~V 83 (371)
+.+.+.+... +. ++||+|+|.++++|+.|+++..|.++.. ..|.++|+|++|+| .+||+|
T Consensus 1544 l~~~~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V----------~vGdrV 1613 (2512)
T 2vz8_A 1544 IRWVCSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRD----------ASGRRV 1613 (2512)
T ss_dssp EEEEECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEE----------TTSCCE
T ss_pred eEEEecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEE----------ccCCEE
Confidence 6777666433 33 7899999999999999999998876432 24568999999987 279999
Q ss_pred eecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCCcch
Q 017431 84 IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDK 163 (371)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~~~~ 163 (371)
+... .+| +|++|++++++.++++|+++++++
T Consensus 1614 ~g~~-------------------------------~~G------------------~~Aeyv~vp~~~v~~iPd~ls~~e 1644 (2512)
T 2vz8_A 1614 MGMV-------------------------------PAE------------------GLATSVLLLQHATWEVPSTWTLEE 1644 (2512)
T ss_dssp EEEC-------------------------------SSC------------------CSBSEEECCGGGEEECCTTSCHHH
T ss_pred EEee-------------------------------cCC------------------ceeeEEEcccceEEEeCCCCCHHH
Confidence 7432 223 999999999999999999999999
Q ss_pred hhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCcEEecC
Q 017431 164 VCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNP 238 (371)
Q Consensus 164 aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~~vi~~ 238 (371)
||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+||.+|+ +|+++++++++.+++++ +|+++++++
T Consensus 1645 AA~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga-~Viat~~s~~k~~~l~~~~~~lga~~v~~~ 1723 (2512)
T 2vz8_A 1645 AASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGC-RVFTTVGSAEKRAYLQARFPQLDETCFANS 1723 (2512)
T ss_dssp HTTSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTCCSTTEEES
T ss_pred HHHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCC-EEEEEeCChhhhHHHHhhcCCCCceEEecC
Confidence 99999999999999989999999999999976 9999999999999999 89999999999998885 788999998
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCC
Q 017431 239 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF 317 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 317 (371)
.+ .++.+.+++.+++ |+|+||||+++ +.++.++++++++ |+++.+|..............+.+++++.++.+..+
T Consensus 1724 ~~--~~~~~~i~~~t~g~GvDvVld~~g~-~~l~~~l~~L~~~-Gr~V~iG~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 1799 (2512)
T 2vz8_A 1724 RD--TSFEQHVLRHTAGKGVDLVLNSLAE-EKLQASVRCLAQH-GRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSL 1799 (2512)
T ss_dssp SS--SHHHHHHHHTTTSCCEEEEEECCCH-HHHHHHHTTEEEE-EEEEECCCHHHHTTCEEEGGGGGGCCEEEECCGGGT
T ss_pred CC--HHHHHHHHHhcCCCCceEEEECCCc-hHHHHHHHhcCCC-cEEEEeecccccccCcccccccccCCcEEEeeHHHH
Confidence 77 7889999999988 99999999985 7799999999996 999999864211111122223345788888765432
Q ss_pred c--ccCcHHHHHHHHH----cCCCCCCCceeeeeecccHHHHHHHHhCCCee-EEEEecC
Q 017431 318 K--SRSQVPWLVDKYM----KKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 370 (371)
Q Consensus 318 ~--~~~~~~~~~~~~~----~~~~~~~~~i~~~~~~~~~~~A~~~~~~~~~~-kvvl~~~ 370 (371)
. ..+.++.+++++. ++.++ ++++++|+++++++|++.+.+++.. |+||+++
T Consensus 1800 ~~~~~~~~~~~l~~l~~~~~~g~l~--p~i~~~f~l~ei~eA~~~l~~g~~~GKvVi~~~ 1857 (2512)
T 2vz8_A 1800 FEEGGATWQEVSELLKAGIQEGVVQ--PLKCTVFPRTKVEAAFRYMAQGKHIGKVVIQVR 1857 (2512)
T ss_dssp TSSCCHHHHHHHHHHHHHHTTTCSC--CCCEEEEESSTHHHHHHHHHTTCCSSEEEEECS
T ss_pred hhhCHHHHHHHHHHHHHHHHcCCcC--CCcceEecHHHHHHHHHhhhccCccceEEEECC
Confidence 1 1234555555554 45544 5678999999999999999998876 9999875
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-22 Score=174.66 Aligned_cols=184 Identities=18% Similarity=0.252 Sum_probs=137.3
Q ss_pred cceEecCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 017431 150 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 228 (371)
Q Consensus 150 ~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~ 228 (371)
+.++++|+++++++||++++++.|||+++.+..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++
T Consensus 2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~ 80 (198)
T 1pqw_A 2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLS 80 (198)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHH
T ss_pred CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence 5688999999999999999999999999988889999999999986 9999999999999999 8999999999998899
Q ss_pred hcCCcEEecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeece
Q 017431 229 NFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGR 307 (371)
Q Consensus 229 ~~g~~~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~ 307 (371)
++|++.+++..+ .++.+.+.+.+.+ ++|+++|++|. ..++.++++++++ |+++.+|........+++...+.+++
T Consensus 81 ~~g~~~~~d~~~--~~~~~~~~~~~~~~~~D~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~ 156 (198)
T 1pqw_A 81 RLGVEYVGDSRS--VDFADEILELTDGYGVDVVLNSLAG-EAIQRGVQILAPG-GRFIELGKKDVYADASLGLAALAKSA 156 (198)
T ss_dssp TTCCSEEEETTC--STHHHHHHHHTTTCCEEEEEECCCT-HHHHHHHHTEEEE-EEEEECSCGGGTTTCEEEGGGGTTTC
T ss_pred HcCCCEEeeCCc--HHHHHHHHHHhCCCCCeEEEECCch-HHHHHHHHHhccC-CEEEEEcCCCCcCcCcCChhHhcCCc
Confidence 999988888766 5677778787766 89999999987 6699999999996 99999987542111122222223466
Q ss_pred EEEeeec------CCCcccCcHHHHHHHHHcCCCCCC
Q 017431 308 VWKGTAF------GGFKSRSQVPWLVDKYMKKEIKVD 338 (371)
Q Consensus 308 ~~~g~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 338 (371)
++.++.+ ......+.+++++++++++++++.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~ 193 (198)
T 1pqw_A 157 SFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVL 193 (198)
T ss_dssp EEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCC
T ss_pred EEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCccCC
Confidence 6665433 111113568889999999998865
|
| >2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.12 E-value=3.8e-10 Score=99.42 Aligned_cols=167 Identities=10% Similarity=0.002 Sum_probs=109.8
Q ss_pred CCCCCEEeecC-------CCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecc
Q 017431 77 VQPGDHVIPCY-------QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD 149 (371)
Q Consensus 77 ~~~Gd~V~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 149 (371)
+++||+|++.+ ...|+.|.+|+.|..+.|+.... .+| +.. .
T Consensus 4 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~G~~~~~~~~g~--~~G------------------------~~~------~ 51 (248)
T 2yvl_A 4 FKEGEYVLIRFGEKKFLRKLLPKQSLSVKKSVLKFDEVIGK--PEG------------------------VKI------N 51 (248)
T ss_dssp CCTTCEEEEEETTEEEEEECCTTCEEEETTEEEEGGGTTTC--CTT------------------------EEE------T
T ss_pred CCCCCEEEEEeCCeEEEEEEcCCCEEecCCceEEHHHhcCC--CCC------------------------CEE------E
Confidence 89999999998 77888899999988888864321 011 222 2
Q ss_pred cceEecCCCCCcchhhh-----ccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 017431 150 VSVAKIDPQAPLDKVCL-----LGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF 224 (371)
Q Consensus 150 ~~v~~lP~~~~~~~aa~-----~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~ 224 (371)
...++.|+.....+.+. +..+...+ .+.....+.++++||.+|+| .|..++.+++. +. +|++++.+++..
T Consensus 52 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~vldiG~G-~G~~~~~l~~~-~~-~v~~vD~~~~~~ 126 (248)
T 2yvl_A 52 GFEVYRPTLEEIILLGFERKTQIIYPKDSF--YIALKLNLNKEKRVLEFGTG-SGALLAVLSEV-AG-EVWTFEAVEEFY 126 (248)
T ss_dssp TEEEECCCHHHHHHHTSCCSSCCCCHHHHH--HHHHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEECSCHHHH
T ss_pred EEEEeCCCHHHHHHhcCcCCCCcccchhHH--HHHHhcCCCCCCEEEEeCCC-ccHHHHHHHHh-CC-EEEEEecCHHHH
Confidence 33344443222221111 11111112 24466678899999999998 69999999998 66 999999999988
Q ss_pred HHHHhc----CC-c-EEecCCCCCchHHHHHHhhc-CC-CccEEEEccCCH-HHHHHHHHHhccCCceEEEEcc
Q 017431 225 DRAKNF----GV-T-EFVNPKDHDKPIQQVLVDLT-DG-GVDYSFECIGNV-SVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 225 ~~~~~~----g~-~-~vi~~~~~~~~~~~~~~~~~-~g-g~dvvid~~g~~-~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
+.+++. +. . ..+...+ + .+.. .. ++|+|+...+.+ ..++.+.+.|+++ |+++....
T Consensus 127 ~~a~~~~~~~~~~~~~~~~~~d----~----~~~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~ 191 (248)
T 2yvl_A 127 KTAQKNLKKFNLGKNVKFFNVD----F----KDAEVPEGIFHAAFVDVREPWHYLEKVHKSLMEG-APVGFLLP 191 (248)
T ss_dssp HHHHHHHHHTTCCTTEEEECSC----T----TTSCCCTTCBSEEEECSSCGGGGHHHHHHHBCTT-CEEEEEES
T ss_pred HHHHHHHHHcCCCCcEEEEEcC----h----hhcccCCCcccEEEECCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence 777653 43 1 1121111 1 1122 23 799999888776 6789999999997 99987744
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=98.81 E-value=3.7e-11 Score=113.75 Aligned_cols=181 Identities=16% Similarity=0.135 Sum_probs=126.8
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccC
Q 017431 58 ILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 137 (371)
Q Consensus 58 v~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~ 137 (371)
..|++.++.|.++|+.+.++.+|+.+++..- ..+ ...|. ..
T Consensus 76 ~~g~~a~~~i~~v~~Glds~~vGe~~Il~qv---k~~-------~~~~~------------~~----------------- 116 (404)
T 1gpj_A 76 KRGSEAVRHLFRVASGLESMMVGEQEILRQV---KKA-------YDRAA------------RL----------------- 116 (404)
T ss_dssp EEHHHHHHHHHHHHTTTTSSSTTCHHHHHHH---HHH-------HHHHH------------HH-----------------
T ss_pred ecCchHhhhheeeccCCCCCcCCcchhHHHH---HHH-------HHHHH------------Hc-----------------
Confidence 3799999999999999999999998743110 000 00000 11
Q ss_pred CcceeeeEEecccceEecCCCCCcchhhhccccchhhhhhhhhcC---CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeE
Q 017431 138 TSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTA---KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRV 214 (371)
Q Consensus 138 ~g~~a~~~~v~~~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~---~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v 214 (371)
|++++|+..+...++++|++++.+.++. ..+..++|.++.... +-.+|++|+|+|+|.+|.++++.++..|+++|
T Consensus 117 -G~~~~~~~~~~~~a~~~~k~v~~~~~~~-~~~~s~a~~av~~a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V 194 (404)
T 1gpj_A 117 -GTLDEALKIVFRRAINLGKRAREETRIS-EGAVSIGSAAVELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAV 194 (404)
T ss_dssp -TCCCHHHHHHHHHHHHHHHHHHHHSSTT-CSCCSHHHHHHHHHHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEE
T ss_pred -CCchHHHHHHHHHHhhhhccCcchhhhc-CCCccHHHHHHHHHHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCEE
Confidence 2677787778888999999888777665 346777877653221 12589999999999999999999999999899
Q ss_pred EEEcCChhhH-HHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHH--HHHHHH--h--ccCCceEEEE
Q 017431 215 IGIDIDPKKF-DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVM--RAALEC--C--HKGWGTSVIV 287 (371)
Q Consensus 215 ~~v~~~~~~~-~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~--~~~~~~--l--~~~~G~iv~~ 287 (371)
++++++.++. ++++++|+. +++. .++.+.+ .++|+|++|++.+..+ ...++. + +++ +.++.+
T Consensus 195 ~v~~r~~~ra~~la~~~g~~-~~~~----~~l~~~l-----~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~-~~~v~v 263 (404)
T 1gpj_A 195 LVANRTYERAVELARDLGGE-AVRF----DELVDHL-----ARSDVVVSATAAPHPVIHVDDVREALRKRDRR-SPILII 263 (404)
T ss_dssp EEECSSHHHHHHHHHHHTCE-ECCG----GGHHHHH-----HTCSEEEECCSSSSCCBCHHHHHHHHHHCSSC-CCEEEE
T ss_pred EEEeCCHHHHHHHHHHcCCc-eecH----HhHHHHh-----cCCCEEEEccCCCCceecHHHHHHHHHhccCC-CCEEEE
Confidence 9999998886 688888875 3332 2233332 2699999999874422 134554 3 554 777777
Q ss_pred ccC
Q 017431 288 GVA 290 (371)
Q Consensus 288 g~~ 290 (371)
+..
T Consensus 264 dia 266 (404)
T 1gpj_A 264 DIA 266 (404)
T ss_dssp ECC
T ss_pred Ecc
Confidence 664
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=98.75 E-value=3.1e-08 Score=92.19 Aligned_cols=138 Identities=20% Similarity=0.178 Sum_probs=93.2
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE--EecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--FVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~--vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
+++|+|+|+|++|++++++++.+|+ +|+++++++++.+.+++++... +++... .++.+.+. ++|++++|+
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~-----~~DvVI~~~ 238 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNS--AEIETAVA-----EADLLIGAV 238 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCH--HHHHHHHH-----TCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCceeEeeeCCH--HHHHHHHc-----CCCEEEECC
Confidence 4899999999999999999999999 9999999999998888776543 333222 23333322 699999999
Q ss_pred CCHHH------HHHHHHHhccCCceEEEEccCCCCC-----cccccchheee-ceEEEeeecCCCc---------ccCcH
Q 017431 265 GNVSV------MRAALECCHKGWGTSVIVGVAASGQ-----EISTRPFQLVT-GRVWKGTAFGGFK---------SRSQV 323 (371)
Q Consensus 265 g~~~~------~~~~~~~l~~~~G~iv~~g~~~~~~-----~~~~~~~~~~~-~~~~~g~~~~~~~---------~~~~~ 323 (371)
+.+.. .+..++.|+++ |+++.++....+. ..+++...+.. ++++.++...... ....+
T Consensus 239 ~~~~~~~~~li~~~~~~~~~~g-~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s~~~~~~~~ 317 (361)
T 1pjc_A 239 LVPGRRAPILVPASLVEQMRTG-SVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNSTL 317 (361)
T ss_dssp CCTTSSCCCCBCHHHHTTSCTT-CEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHHHHHHHHHH
T ss_pred CcCCCCCCeecCHHHHhhCCCC-CEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHHHHHHHHHH
Confidence 87542 56778889996 9999998753221 12233223333 6776665421110 12335
Q ss_pred HHHHHHHHcC
Q 017431 324 PWLVDKYMKK 333 (371)
Q Consensus 324 ~~~~~~~~~~ 333 (371)
+.+++++.+|
T Consensus 318 ~~l~~l~~~G 327 (361)
T 1pjc_A 318 PYVVKLANQG 327 (361)
T ss_dssp HHHHHHHHHG
T ss_pred HHHHHHHhCC
Confidence 6677777766
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=98.57 E-value=1.4e-07 Score=88.52 Aligned_cols=146 Identities=18% Similarity=0.227 Sum_probs=94.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE-ecCCCC-------------Cc----hHHH
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDH-------------DK----PIQQ 247 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~-------------~~----~~~~ 247 (371)
++++|+|+|+|.+|++++++++.+|+ +|+++++++++.+.++++|+..+ ++..+. .. ...+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 249 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE 249 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence 68999999999999999999999999 79999999999888888998644 222110 00 0112
Q ss_pred HHHhhcCCCccEEEEcc---CC--HHH-HHHHHHHhccCCceEEEEccCCCCC-cccccchhee-eceEEEeeecCCCcc
Q 017431 248 VLVDLTDGGVDYSFECI---GN--VSV-MRAALECCHKGWGTSVIVGVAASGQ-EISTRPFQLV-TGRVWKGTAFGGFKS 319 (371)
Q Consensus 248 ~~~~~~~gg~dvvid~~---g~--~~~-~~~~~~~l~~~~G~iv~~g~~~~~~-~~~~~~~~~~-~~~~~~g~~~~~~~~ 319 (371)
.+.+... ++|++++|+ |. +.+ .+..++.|+++ +.++.++....+. ..+.+...+. +++++.++... .
T Consensus 250 ~l~~~~~-~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g-~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g~~~~--p- 324 (384)
T 1l7d_A 250 AVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPG-SVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNV--P- 324 (384)
T ss_dssp HHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTT-CEEEETTGGGTCSSTTCCTTCEEEETTEEEECCSSG--G-
T ss_pred HHHHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCC-CEEEEEecCCCCCeecccCCcEEEECCEEEEEeCCC--c-
Confidence 2333332 699999999 53 222 37788999996 9999998643221 1111222233 37788776432 1
Q ss_pred cCcHHHHHHHHHcCCCCC
Q 017431 320 RSQVPWLVDKYMKKEIKV 337 (371)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~ 337 (371)
........+++.++.+++
T Consensus 325 ~~~~~~a~~l~~~~~~~~ 342 (384)
T 1l7d_A 325 SRVAADASPLFAKNLLNF 342 (384)
T ss_dssp GGGHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHhHHHH
Confidence 122444777777765543
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.53 E-value=3.4e-07 Score=85.44 Aligned_cols=140 Identities=22% Similarity=0.242 Sum_probs=86.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
++++|+|+|+|.+|.++++.++.+|+ +|+++++++++.+.+++ +|.....+..+ ..++.+.+. ++|++++|+
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~g~~~~~~~~~-~~~l~~~~~-----~~DvVi~~~ 237 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVFGGRVITLTAT-EANIKKSVQ-----HADLLIGAV 237 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSEEEEECC-HHHHHHHHH-----HCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCceEEEecCC-HHHHHHHHh-----CCCEEEECC
Confidence 46899999999999999999999999 99999999998887765 77653232222 123333332 599999999
Q ss_pred CCHHH------HHHHHHHhccCCceEEEEccCCCCC-----cccccchhee-eceEEEeeecCCC---------cccCcH
Q 017431 265 GNVSV------MRAALECCHKGWGTSVIVGVAASGQ-----EISTRPFQLV-TGRVWKGTAFGGF---------KSRSQV 323 (371)
Q Consensus 265 g~~~~------~~~~~~~l~~~~G~iv~~g~~~~~~-----~~~~~~~~~~-~~~~~~g~~~~~~---------~~~~~~ 323 (371)
+.+.. .+..++.|+++ |.+|.++....+. +.+++...+. +++++.++..... ...+.+
T Consensus 238 g~~~~~~~~li~~~~l~~mk~g-g~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~~~~ 316 (369)
T 2eez_A 238 LVPGAKAPKLVTRDMLSLMKEG-AVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTNQTL 316 (369)
T ss_dssp C-------CCSCHHHHTTSCTT-CEEEECC-------------------CEETTEEEECCSCSGGGSHHHHHHHHHHHHH
T ss_pred CCCccccchhHHHHHHHhhcCC-CEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCCcchhcHHHHHHHHHHHHH
Confidence 87542 57788999996 9999998753221 1122222222 3666665542111 012345
Q ss_pred HHHHHHHHcC
Q 017431 324 PWLVDKYMKK 333 (371)
Q Consensus 324 ~~~~~~~~~~ 333 (371)
+.+++++.++
T Consensus 317 ~~l~~l~~~g 326 (369)
T 2eez_A 317 PYVLKLAEKG 326 (369)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHhcC
Confidence 6677777666
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=6.9e-07 Score=83.56 Aligned_cols=98 Identities=18% Similarity=0.186 Sum_probs=75.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCcEEecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
-++++|+|+|+|.+|.++++.++.+|+ +|+++++++++.+.+++ +|.....+... ..++.+.+. ++|++++|
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~~~~~~~~~-~~~l~~~l~-----~aDvVi~~ 238 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCGRIHTRYSS-AYELEGAVK-----RADLVIGA 238 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSSEEEECC-HHHHHHHHH-----HCSEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCCeeEeccCC-HHHHHHHHc-----CCCEEEEC
Confidence 358999999999999999999999999 99999999998887776 77653222211 123333332 59999999
Q ss_pred cCCHHH------HHHHHHHhccCCceEEEEccC
Q 017431 264 IGNVSV------MRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 264 ~g~~~~------~~~~~~~l~~~~G~iv~~g~~ 290 (371)
++.+.. .+..++.|+++ |.++.++..
T Consensus 239 ~~~p~~~t~~li~~~~l~~mk~g-~~iV~va~~ 270 (377)
T 2vhw_A 239 VLVPGAKAPKLVSNSLVAHMKPG-AVLVDIAID 270 (377)
T ss_dssp CCCTTSCCCCCBCHHHHTTSCTT-CEEEEGGGG
T ss_pred CCcCCCCCcceecHHHHhcCCCC-cEEEEEecC
Confidence 986543 57788999996 999999854
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=98.39 E-value=1.7e-06 Score=81.37 Aligned_cols=124 Identities=19% Similarity=0.252 Sum_probs=82.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEe-cCCC---C--------CchH----HHHH
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NPKD---H--------DKPI----QQVL 249 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi-~~~~---~--------~~~~----~~~~ 249 (371)
++++|+|+|+|.+|++++++++.+|+ +|++++++.++.+.++++|+..+. +..+ . ..++ .+.+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l 249 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF 249 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence 68999999999999999999999999 899999999998888889886431 1100 0 0111 1123
Q ss_pred HhhcCCCccEEEEccCCH-----HHH-HHHHHHhccCCceEEEEccCCCCCcccccc-hh--ee-eceEEEeee
Q 017431 250 VDLTDGGVDYSFECIGNV-----SVM-RAALECCHKGWGTSVIVGVAASGQEISTRP-FQ--LV-TGRVWKGTA 313 (371)
Q Consensus 250 ~~~~~gg~dvvid~~g~~-----~~~-~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~--~~-~~~~~~g~~ 313 (371)
.+... ++|+++++++.+ .++ +..++.|+++ +.+|.++....+ .+++.. .. +. +++++.|+.
T Consensus 250 ~e~~~-~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g-~vIVdva~~~Gg-~v~~~~~~~p~~~~~gv~i~g~~ 320 (401)
T 1x13_A 250 AAQAK-EVDIIVTTALIPGKPAPKLITREMVDSMKAG-SVIVDLAAQNGG-NCEYTVPGEIFTTENGVKVIGYT 320 (401)
T ss_dssp HHHHH-HCSEEEECCCCTTSCCCCCBCHHHHHTSCTT-CEEEETTGGGTC-SBTTCCTTSEEECTTSCEEECCS
T ss_pred HHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCC-cEEEEEcCCCCC-CcCcccCCCceEEECCEEEEeeC
Confidence 33222 699999995321 223 6788999996 999999864222 233221 11 22 377888764
|
| >3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A* | Back alignment and structure |
|---|
Probab=98.37 E-value=9.8e-07 Score=84.70 Aligned_cols=104 Identities=23% Similarity=0.312 Sum_probs=82.2
Q ss_pred hhhhhhhhhcC-CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHH
Q 017431 172 PTGLGAVWNTA-KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLV 250 (371)
Q Consensus 172 ~ta~~~l~~~~-~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~ 250 (371)
.++|+++.+.. ...+|++|+|+|.|.+|..+++.++.+|+ +|+++++++++.+.++++|++ ++ + +.+.+
T Consensus 258 ~s~~~g~~r~~~~~l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~~~~~~~A~~~Ga~-~~---~----l~e~l- 327 (494)
T 3ce6_A 258 HSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEIDPINALQAMMEGFD-VV---T----VEEAI- 327 (494)
T ss_dssp HHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-EC---C----HHHHG-
T ss_pred hhhhHHHHhccCCCCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCE-Ee---c----HHHHH-
Confidence 44555543222 26789999999999999999999999999 999999999998888889985 22 1 22221
Q ss_pred hhcCCCccEEEEccCCHHHHH-HHHHHhccCCceEEEEccC
Q 017431 251 DLTDGGVDYSFECIGNVSVMR-AALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 251 ~~~~gg~dvvid~~g~~~~~~-~~~~~l~~~~G~iv~~g~~ 290 (371)
.++|+++++++....+. ..++.|+++ |+++.+|..
T Consensus 328 ----~~aDvVi~atgt~~~i~~~~l~~mk~g-gilvnvG~~ 363 (494)
T 3ce6_A 328 ----GDADIVVTATGNKDIIMLEHIKAMKDH-AILGNIGHF 363 (494)
T ss_dssp ----GGCSEEEECSSSSCSBCHHHHHHSCTT-CEEEECSSS
T ss_pred ----hCCCEEEECCCCHHHHHHHHHHhcCCC-cEEEEeCCC
Confidence 26999999999877665 788999997 999999875
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.10 E-value=1.8e-05 Score=73.76 Aligned_cols=124 Identities=19% Similarity=0.228 Sum_probs=82.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec-------------CCC-CCchH----HH
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN-------------PKD-HDKPI----QQ 247 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~-------------~~~-~~~~~----~~ 247 (371)
++.+|+|+|+|.+|+.++++++.+|+ +|+++++++++.+.++++|+..+-. +.. ....+ ..
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~ 267 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGA-VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA 267 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence 67899999999999999999999999 8999999999999999998753211 000 00111 11
Q ss_pred HHHhhcCCCccEEEEccCCH-----H-HHHHHHHHhccCCceEEEEccCCCCCccccc-c-hheee-ceEEEeee
Q 017431 248 VLVDLTDGGVDYSFECIGNV-----S-VMRAALECCHKGWGTSVIVGVAASGQEISTR-P-FQLVT-GRVWKGTA 313 (371)
Q Consensus 248 ~~~~~~~gg~dvvid~~g~~-----~-~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~-~-~~~~~-~~~~~g~~ 313 (371)
.+.+.. .++|++|.|+..+ . ..+..++.|+++ +.+|.++....+ .+.++ + ..+.. ++++.+..
T Consensus 268 ~l~e~l-~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~G-sVIVDvA~d~GG-~~e~t~~~~~~~~~GV~~~gv~ 339 (405)
T 4dio_A 268 LVAEHI-AKQDIVITTALIPGRPAPRLVTREMLDSMKPG-SVVVDLAVERGG-NIEGAEAGKVTEVGGVRIVGHL 339 (405)
T ss_dssp HHHHHH-HTCSEEEECCCCSSSCCCCCBCHHHHTTSCTT-CEEEETTGGGTC-SBTTCCTTEEEEETTEEEEECS
T ss_pred HHHHHh-cCCCEEEECCcCCCCCCCEEecHHHHhcCCCC-CEEEEEeCCCCC-CccccCCCCeEEECCEEEEEeC
Confidence 222221 1699999986432 1 247888999996 999999764322 23222 1 12223 67777665
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=98.09 E-value=9.8e-06 Score=74.91 Aligned_cols=123 Identities=22% Similarity=0.253 Sum_probs=82.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCC-------CCC----c----hHHHHHH
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK-------DHD----K----PIQQVLV 250 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~-------~~~----~----~~~~~~~ 250 (371)
++.+|+|+|+|.+|+.++++++.+|+ +|+++++++++.+.++++|++.+ ... ... . .....+.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~lGa~~~-~l~~~~~~~~gya~~~~~~~~~~~~~~l~ 260 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGA-KTTGYDVRPEVAEQVRSVGAQWL-DLGIDAAGEGGYARELSEAERAQQQQALE 260 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHHTTCEEC-CCC-------------CHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEE-eccccccccccchhhhhHHHHhhhHHHHH
Confidence 67899999999999999999999999 89999999999999999987532 110 000 0 0111222
Q ss_pred hhcCCCccEEEEccCCH-----H-HHHHHHHHhccCCceEEEEccCCCCCccccc-ch-heee-ceEEEeee
Q 017431 251 DLTDGGVDYSFECIGNV-----S-VMRAALECCHKGWGTSVIVGVAASGQEISTR-PF-QLVT-GRVWKGTA 313 (371)
Q Consensus 251 ~~~~gg~dvvid~~g~~-----~-~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~-~~-~~~~-~~~~~g~~ 313 (371)
+.. .++|+||.++..+ . ..+..++.|+++ +.+|.++....+ .+..+ +. .+.. +.++.+..
T Consensus 261 e~l-~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpG-sVIVDvA~d~GG-~~e~t~~~~~~~~~gV~~~~v~ 329 (381)
T 3p2y_A 261 DAI-TKFDIVITTALVPGRPAPRLVTAAAATGMQPG-SVVVDLAGETGG-NCELTEPGRTIVHHGVTITSPL 329 (381)
T ss_dssp HHH-TTCSEEEECCCCTTSCCCCCBCHHHHHTSCTT-CEEEETTGGGTC-SBTTCCTTCEEEETTEEEECCS
T ss_pred HHH-hcCCEEEECCCCCCcccceeecHHHHhcCCCC-cEEEEEeCCCCC-ccccccCCCeEEECCEEEEeeC
Confidence 222 2699999986332 1 247888999996 999999875433 23322 11 1223 66666654
|
| >1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=98.03 E-value=2.5e-05 Score=69.62 Aligned_cols=103 Identities=20% Similarity=0.297 Sum_probs=72.7
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----cCC-cEE-ecCCCCCchHHHHHH
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGV-TEF-VNPKDHDKPIQQVLV 250 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~v~~v~~~~~~~~~~~~----~g~-~~v-i~~~~~~~~~~~~~~ 250 (371)
+.....+.++++||-+|+|. |..++.+++..+ ..+|++++.+++..+.+++ .+. ..+ +...+ +.+
T Consensus 104 i~~~~~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d----~~~--- 175 (277)
T 1o54_A 104 IAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRD----ISE--- 175 (277)
T ss_dssp HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCC----GGG---
T ss_pred HHHHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECC----HHH---
Confidence 44566788999999999976 888889999864 3499999999988777754 343 111 21212 111
Q ss_pred hhcCCCccEEEEccCCH-HHHHHHHHHhccCCceEEEEcc
Q 017431 251 DLTDGGVDYSFECIGNV-SVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 251 ~~~~gg~dvvid~~g~~-~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
....+.+|+|+.....+ ..++.+.+.|+++ |.++....
T Consensus 176 ~~~~~~~D~V~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~ 214 (277)
T 1o54_A 176 GFDEKDVDALFLDVPDPWNYIDKCWEALKGG-GRFATVCP 214 (277)
T ss_dssp CCSCCSEEEEEECCSCGGGTHHHHHHHEEEE-EEEEEEES
T ss_pred cccCCccCEEEECCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence 12223799999766665 6789999999997 99887743
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=97.94 E-value=5.2e-05 Score=61.31 Aligned_cols=92 Identities=20% Similarity=0.221 Sum_probs=64.5
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCcEEecCCCCCchHHHHHHhhcCCCccEEE
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSF 261 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvi 261 (371)
...++++|+|+|+|.+|...++.++..|+ +|+++++++++.+.++ +.|...+. ... .+ .+.+.+..-.++|++|
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~g~~~~~-~d~--~~-~~~l~~~~~~~ad~Vi 89 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSEFSGFTVV-GDA--AE-FETLKECGMEKADMVF 89 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTTCCSEEEE-SCT--TS-HHHHHTTTGGGCSEEE
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhcCCCcEEE-ecC--CC-HHHHHHcCcccCCEEE
Confidence 34567899999999999999999999999 8999999998887776 66664332 221 11 1233332112799999
Q ss_pred EccCCHHHHHHHHHHhcc
Q 017431 262 ECIGNVSVMRAALECCHK 279 (371)
Q Consensus 262 d~~g~~~~~~~~~~~l~~ 279 (371)
.+++.......+...++.
T Consensus 90 ~~~~~~~~~~~~~~~~~~ 107 (155)
T 2g1u_A 90 AFTNDDSTNFFISMNARY 107 (155)
T ss_dssp ECSSCHHHHHHHHHHHHH
T ss_pred EEeCCcHHHHHHHHHHHH
Confidence 999997655555555543
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=97.92 E-value=7.5e-05 Score=56.88 Aligned_cols=94 Identities=21% Similarity=0.172 Sum_probs=64.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhcCCcEE-ecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g-~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
.+.+|+|+|+|.+|...++.+...| . +|+++++++++.+.+.+.+...+ .+..+ . +.+.+.. .++|++|++
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~--~---~~~~~~~-~~~d~vi~~ 76 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNY-SVTVADHDLAALAVLNRMGVATKQVDAKD--E---AGLAKAL-GGFDAVISA 76 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSE-EEEEEESCHHHHHHHHTTTCEEEECCTTC--H---HHHHHHT-TTCSEEEEC
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCc-eEEEEeCCHHHHHHHHhCCCcEEEecCCC--H---HHHHHHH-cCCCEEEEC
Confidence 3568999999999999999999999 6 89999999998887776666443 22222 1 2333332 269999999
Q ss_pred cCCHHHHHHHHHHhccCCceEEEE
Q 017431 264 IGNVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 264 ~g~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
++..........+...+ -..+.+
T Consensus 77 ~~~~~~~~~~~~~~~~g-~~~~~~ 99 (118)
T 3ic5_A 77 APFFLTPIIAKAAKAAG-AHYFDL 99 (118)
T ss_dssp SCGGGHHHHHHHHHHTT-CEEECC
T ss_pred CCchhhHHHHHHHHHhC-CCEEEe
Confidence 98754444444444553 444443
|
| >3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=2.6e-05 Score=69.68 Aligned_cols=100 Identities=16% Similarity=0.134 Sum_probs=73.9
Q ss_pred hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc----CCcEE-ecCCCCCchHHHHHHhhcC
Q 017431 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTEF-VNPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~----g~~~v-i~~~~~~~~~~~~~~~~~~ 254 (371)
...+++++++||.+|+|+.+..++.+++..|+ +|++++.+++..+.+++. |.+.+ +...+ . .++.+
T Consensus 116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga-~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gD----a----~~l~d 186 (298)
T 3fpf_A 116 ALGRFRRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSRKVIEGLGVDGVNVITGD----E----TVIDG 186 (298)
T ss_dssp HHTTCCTTCEEEEECCCSSCHHHHHHHHTTCC-EEEEEESSHHHHHHHHHHHHHHTCCSEEEEESC----G----GGGGG
T ss_pred HHcCCCCcCEEEEECCCccHHHHHHHHHccCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEECc----h----hhCCC
Confidence 34678999999999999888888888988898 999999999988877653 54222 11111 1 11223
Q ss_pred CCccEEEEccCCH---HHHHHHHHHhccCCceEEEEcc
Q 017431 255 GGVDYSFECIGNV---SVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 255 gg~dvvid~~g~~---~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
+.||+|+.....+ .+++.+.+.|++| |+++....
T Consensus 187 ~~FDvV~~~a~~~d~~~~l~el~r~LkPG-G~Lvv~~~ 223 (298)
T 3fpf_A 187 LEFDVLMVAALAEPKRRVFRNIHRYVDTE-TRIIYRTY 223 (298)
T ss_dssp CCCSEEEECTTCSCHHHHHHHHHHHCCTT-CEEEEEEC
T ss_pred CCcCEEEECCCccCHHHHHHHHHHHcCCC-cEEEEEcC
Confidence 4899999755442 5789999999997 99987653
|
| >3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A* | Back alignment and structure |
|---|
Probab=97.80 E-value=6.6e-05 Score=70.21 Aligned_cols=94 Identities=28% Similarity=0.344 Sum_probs=73.7
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEE
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE 262 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid 262 (371)
..-.|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|.. +. ++.+.+ ...|+++.
T Consensus 216 ~~L~GktV~ViG~G~IGk~vA~~Lra~Ga-~Viv~D~dp~ra~~A~~~G~~-v~-------~Leeal-----~~ADIVi~ 281 (435)
T 3gvp_A 216 MMFGGKQVVVCGYGEVGKGCCAALKAMGS-IVYVTEIDPICALQACMDGFR-LV-------KLNEVI-----RQVDIVIT 281 (435)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-EC-------CHHHHT-----TTCSEEEE
T ss_pred ceecCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCChhhhHHHHHcCCE-ec-------cHHHHH-----hcCCEEEE
Confidence 35689999999999999999999999999 899999988776666666752 11 122222 15899999
Q ss_pred ccCCHHHHH-HHHHHhccCCceEEEEccCC
Q 017431 263 CIGNVSVMR-AALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 263 ~~g~~~~~~-~~~~~l~~~~G~iv~~g~~~ 291 (371)
|.+..+.+. ..++.|+++ +.++.+|...
T Consensus 282 atgt~~lI~~e~l~~MK~g-ailINvgrg~ 310 (435)
T 3gvp_A 282 CTGNKNVVTREHLDRMKNS-CIVCNMGHSN 310 (435)
T ss_dssp CSSCSCSBCHHHHHHSCTT-EEEEECSSTT
T ss_pred CCCCcccCCHHHHHhcCCC-cEEEEecCCC
Confidence 988766664 888999996 9999887753
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.78 E-value=7.6e-06 Score=65.45 Aligned_cols=106 Identities=11% Similarity=0.059 Sum_probs=72.1
Q ss_pred chhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCcEEecCCCCCchHHHHH
Q 017431 171 VPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTEFVNPKDHDKPIQQVL 249 (371)
Q Consensus 171 ~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~ 249 (371)
+++++.++ +......+++|+|+|+|.+|.+.++.++..|+ +|+++++++++.+ ++++++... .... ++.+.+
T Consensus 6 ~sv~~~a~-~~~~~~~~~~v~iiG~G~iG~~~a~~l~~~g~-~v~v~~r~~~~~~~~a~~~~~~~-~~~~----~~~~~~ 78 (144)
T 3oj0_A 6 VSIPSIVY-DIVRKNGGNKILLVGNGMLASEIAPYFSYPQY-KVTVAGRNIDHVRAFAEKYEYEY-VLIN----DIDSLI 78 (144)
T ss_dssp CSHHHHHH-HHHHHHCCCEEEEECCSHHHHHHGGGCCTTTC-EEEEEESCHHHHHHHHHHHTCEE-EECS----CHHHHH
T ss_pred ccHHHHHH-HHHHhccCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCHHHHHHHHHHhCCce-Eeec----CHHHHh
Confidence 44555554 33333348999999999999999999888999 5999999988765 466777532 2222 233333
Q ss_pred HhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 250 VDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 250 ~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
. ++|++++|++.++.+. ....+.++ +.++.++..
T Consensus 79 ~-----~~Divi~at~~~~~~~-~~~~l~~g-~~vid~~~p 112 (144)
T 3oj0_A 79 K-----NNDVIITATSSKTPIV-EERSLMPG-KLFIDLGNP 112 (144)
T ss_dssp H-----TCSEEEECSCCSSCSB-CGGGCCTT-CEEEECCSS
T ss_pred c-----CCCEEEEeCCCCCcEe-eHHHcCCC-CEEEEccCC
Confidence 2 5899999999754221 22567775 888887653
|
| >2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.72 E-value=1.6e-05 Score=73.09 Aligned_cols=104 Identities=21% Similarity=0.225 Sum_probs=66.8
Q ss_pred hhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHhc----C-------------CcEEecCCC
Q 017431 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNF----G-------------VTEFVNPKD 240 (371)
Q Consensus 179 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~v~~v~~~~~~~~~~~~~----g-------------~~~vi~~~~ 240 (371)
.....+.+|++||-+|+|. |..++.+++..|. .+|++++.+++..+.+++. + ...++...-
T Consensus 98 l~~l~~~~g~~VLDiG~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~ 176 (336)
T 2b25_A 98 LSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDI 176 (336)
T ss_dssp HHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCT
T ss_pred HHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECCh
Confidence 3455788999999999976 7888888888764 4999999999877766542 1 111221111
Q ss_pred CCchHHHHHHhhcCCCccEEEEccCCH-HHHHHHHHHhccCCceEEEEcc
Q 017431 241 HDKPIQQVLVDLTDGGVDYSFECIGNV-SVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 241 ~~~~~~~~~~~~~~gg~dvvid~~g~~-~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
.. . ......+.||+|+.....+ ..+..+.+.|+++ |+++.+..
T Consensus 177 -~~-~---~~~~~~~~fD~V~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~ 220 (336)
T 2b25_A 177 -SG-A---TEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHG-GVCAVYVV 220 (336)
T ss_dssp -TC-C---C-------EEEEEECSSSTTTTHHHHGGGEEEE-EEEEEEES
T ss_pred -HH-c---ccccCCCCeeEEEECCCCHHHHHHHHHHhcCCC-cEEEEEeC
Confidence 01 0 0011223699888654443 4588999999997 99987643
|
| >3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C* | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00042 Score=60.62 Aligned_cols=101 Identities=23% Similarity=0.260 Sum_probs=72.3
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhc----CCcE--EecCCCCCchHHHHHH
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNF----GVTE--FVNPKDHDKPIQQVLV 250 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~v~~v~~~~~~~~~~~~~----g~~~--vi~~~~~~~~~~~~~~ 250 (371)
+.....+.++++||-+|+|. |..+..+++..+ ..+|++++.+++..+.+++. |... .+...+ +.
T Consensus 85 i~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d----~~---- 155 (255)
T 3mb5_A 85 IVAYAGISPGDFIVEAGVGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKD----IY---- 155 (255)
T ss_dssp HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSC----GG----
T ss_pred HHHhhCCCCCCEEEEecCCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECc----hh----
Confidence 44566788999999999975 888889998864 34999999999887777643 4322 121222 11
Q ss_pred hhcCC-CccEEEEccCCH-HHHHHHHHHhccCCceEEEEc
Q 017431 251 DLTDG-GVDYSFECIGNV-SVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 251 ~~~~g-g~dvvid~~g~~-~~~~~~~~~l~~~~G~iv~~g 288 (371)
+.... .+|+|+.....+ ..++.+.+.|+++ |+++.+.
T Consensus 156 ~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~ 194 (255)
T 3mb5_A 156 EGIEEENVDHVILDLPQPERVVEHAAKALKPG-GFFVAYT 194 (255)
T ss_dssp GCCCCCSEEEEEECSSCGGGGHHHHHHHEEEE-EEEEEEE
T ss_pred hccCCCCcCEEEECCCCHHHHHHHHHHHcCCC-CEEEEEE
Confidence 22223 799999776664 3689999999997 9998774
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00057 Score=56.65 Aligned_cols=95 Identities=18% Similarity=0.278 Sum_probs=67.4
Q ss_pred CCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhcCCcEEe-cCCCCCchHHHHHHhhcCC-CccEEEEc
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEFV-NPKDHDKPIQQVLVDLTDG-GVDYSFEC 263 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~-g~~~v~~v~~~~~~~~~~~~~g~~~vi-~~~~~~~~~~~~~~~~~~g-g~dvvid~ 263 (371)
+++|+|+|+|.+|...++.++.. |+ .|+++++++++.+.+++.|...+. +..+ . +.+.+.++- ++|+++.+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~g~~~~~gd~~~--~---~~l~~~~~~~~ad~vi~~ 112 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSEGRNVISGDATD--P---DFWERILDTGHVKLVLLA 112 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHTTCCEEECCTTC--H---HHHHTBCSCCCCCEEEEC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHCCCCEEEcCCCC--H---HHHHhccCCCCCCEEEEe
Confidence 56899999999999999999998 99 899999999998888888876443 3222 1 234444233 79999999
Q ss_pred cCCHHHHHHHHHHhccC--CceEEEE
Q 017431 264 IGNVSVMRAALECCHKG--WGTSVIV 287 (371)
Q Consensus 264 ~g~~~~~~~~~~~l~~~--~G~iv~~ 287 (371)
+++......+...++.. ...++..
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 113 MPHHQGNQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp CSSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCChHHHHHHHHHHHHHCCCCEEEEE
Confidence 99866544444444432 1455543
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.64 E-value=0.0002 Score=64.42 Aligned_cols=95 Identities=25% Similarity=0.262 Sum_probs=71.5
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
--+|++|+|+|+|.+|.++++.++.+|+ +|++.+++.++.+.++++|+.. ++. .++.+.+ ...|+|+.+
T Consensus 152 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~-~~~----~~l~~~l-----~~aDvVi~~ 220 (293)
T 3d4o_A 152 TIHGANVAVLGLGRVGMSVARKFAALGA-KVKVGARESDLLARIAEMGMEP-FHI----SKAAQEL-----RDVDVCINT 220 (293)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTSEE-EEG----GGHHHHT-----TTCSEEEEC
T ss_pred CCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCCee-cCh----hhHHHHh-----cCCCEEEEC
Confidence 4578999999999999999999999999 9999999988877777788642 221 1222221 269999999
Q ss_pred cCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 264 IGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 264 ~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
++..-.-...++.|+++ +.++.++..
T Consensus 221 ~p~~~i~~~~l~~mk~~-~~lin~ar~ 246 (293)
T 3d4o_A 221 IPALVVTANVLAEMPSH-TFVIDLASK 246 (293)
T ss_dssp CSSCCBCHHHHHHSCTT-CEEEECSST
T ss_pred CChHHhCHHHHHhcCCC-CEEEEecCC
Confidence 87632224567788996 999988763
|
| >3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00024 Score=66.62 Aligned_cols=94 Identities=23% Similarity=0.249 Sum_probs=72.7
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEE
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE 262 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid 262 (371)
..-.|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|.. +. ++.+.+. ..|+++.
T Consensus 243 ~~L~GKTVgVIG~G~IGr~vA~~lrafGa-~Viv~d~dp~~a~~A~~~G~~-vv-------~LeElL~-----~ADIVv~ 308 (464)
T 3n58_A 243 VMMAGKVAVVCGYGDVGKGSAQSLAGAGA-RVKVTEVDPICALQAAMDGFE-VV-------TLDDAAS-----TADIVVT 308 (464)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCE-EC-------CHHHHGG-----GCSEEEE
T ss_pred CcccCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCcchhhHHHhcCce-ec-------cHHHHHh-----hCCEEEE
Confidence 35689999999999999999999999999 999999888765555556653 21 1222222 5899999
Q ss_pred ccCCHHHH-HHHHHHhccCCceEEEEccCC
Q 017431 263 CIGNVSVM-RAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 263 ~~g~~~~~-~~~~~~l~~~~G~iv~~g~~~ 291 (371)
+++..+.+ ...+..|+++ +.++.+|...
T Consensus 309 atgt~~lI~~e~l~~MK~G-AILINvGRgd 337 (464)
T 3n58_A 309 TTGNKDVITIDHMRKMKDM-CIVGNIGHFD 337 (464)
T ss_dssp CCSSSSSBCHHHHHHSCTT-EEEEECSSST
T ss_pred CCCCccccCHHHHhcCCCC-eEEEEcCCCC
Confidence 99876654 6888999996 8888887643
|
| >1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33 | Back alignment and structure |
|---|
Probab=97.57 E-value=6.1e-05 Score=66.64 Aligned_cols=95 Identities=14% Similarity=0.119 Sum_probs=68.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~-g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
.++.+||.+|+|. |..+..+++.. |. +|++++.+++..+.+++.+....+...+. .++ ....+.||+|+..
T Consensus 84 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~-~~~-----~~~~~~fD~v~~~ 155 (269)
T 1p91_A 84 DKATAVLDIGCGE-GYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVASS-HRL-----PFSDTSMDAIIRI 155 (269)
T ss_dssp TTCCEEEEETCTT-STTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECCT-TSC-----SBCTTCEEEEEEE
T ss_pred CCCCEEEEECCCC-CHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHhCCCcEEEEcch-hhC-----CCCCCceeEEEEe
Confidence 5788999999987 98999999987 66 99999999999998887654322211110 010 1222379999964
Q ss_pred cCCHHHHHHHHHHhccCCceEEEEcc
Q 017431 264 IGNVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 264 ~g~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
.. +..+..+.+.|+++ |+++....
T Consensus 156 ~~-~~~l~~~~~~L~pg-G~l~~~~~ 179 (269)
T 1p91_A 156 YA-PCKAEELARVVKPG-GWVITATP 179 (269)
T ss_dssp SC-CCCHHHHHHHEEEE-EEEEEEEE
T ss_pred CC-hhhHHHHHHhcCCC-cEEEEEEc
Confidence 43 46699999999997 99987743
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00071 Score=59.04 Aligned_cols=102 Identities=18% Similarity=0.108 Sum_probs=67.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE---ecCCCCCchHHHHHHhhcC--CCccEE
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF---VNPKDHDKPIQQVLVDLTD--GGVDYS 260 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v---i~~~~~~~~~~~~~~~~~~--gg~dvv 260 (371)
+++|||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+.+.... .|..+ ..+..+.+.+... |++|++
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~v~~~~~~~g~iDiL 79 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEKRSADFAKERPNLFYFHGDVAD-PLTLKKFVEYAMEKLQRIDVL 79 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCTTS-HHHHHHHHHHHHHHHSCCCEE
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCEEEEEecCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 378999987 8999999999999999 99999999888776655444332 22222 1222222322222 379999
Q ss_pred EEccCCH-------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 261 FECIGNV-------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 261 id~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
++++|.. ...+.++..|.+.+|++|.+++.
T Consensus 80 VNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~ 134 (247)
T 3ged_A 80 VNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIAST 134 (247)
T ss_dssp EECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCG
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeec
Confidence 9988751 12345555564434999999764
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.0013 Score=51.91 Aligned_cols=94 Identities=15% Similarity=0.145 Sum_probs=66.7
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEe-cCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi-~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
.++|+|+|.|.+|...++.++..|. .|+++++++++.+.+++.|...+. +..+ . +.+.+..-.++|+++.+++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~~g~~~i~gd~~~--~---~~l~~a~i~~ad~vi~~~~ 80 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRERGVRAVLGNAAN--E---EIMQLAHLECAKWLILTIP 80 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEESCTTS--H---HHHHHTTGGGCSEEEECCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHcCCCEEECCCCC--H---HHHHhcCcccCCEEEEECC
Confidence 4679999999999999999999999 899999999999988888875443 2222 2 2333331127999999999
Q ss_pred CHHHHH---HHHHHhccCCceEEEE
Q 017431 266 NVSVMR---AALECCHKGWGTSVIV 287 (371)
Q Consensus 266 ~~~~~~---~~~~~l~~~~G~iv~~ 287 (371)
...... ...+.+.+. .+++.-
T Consensus 81 ~~~~n~~~~~~a~~~~~~-~~iiar 104 (140)
T 3fwz_A 81 NGYEAGEIVASARAKNPD-IEIIAR 104 (140)
T ss_dssp CHHHHHHHHHHHHHHCSS-SEEEEE
T ss_pred ChHHHHHHHHHHHHHCCC-CeEEEE
Confidence 854322 334445564 565543
|
| >2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.53 E-value=0.0002 Score=62.69 Aligned_cols=104 Identities=17% Similarity=0.131 Sum_probs=72.7
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhc-----CCcEE-ecCCCCCchHHHHHH
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNF-----GVTEF-VNPKDHDKPIQQVLV 250 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~v~~v~~~~~~~~~~~~~-----g~~~v-i~~~~~~~~~~~~~~ 250 (371)
+.....+.++++||-+|+|. |..+..+++..| ..+|++++.+++..+.+++. |...+ +...+ +.+.
T Consensus 88 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d----~~~~-- 160 (258)
T 2pwy_A 88 MVTLLDLAPGMRVLEAGTGS-GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGK----LEEA-- 160 (258)
T ss_dssp HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESC----GGGC--
T ss_pred HHHHcCCCCCCEEEEECCCc-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECc----hhhc--
Confidence 34556788999999999984 888899999864 34999999999888777653 53222 11111 1100
Q ss_pred hhcCCCccEEEEccCCH-HHHHHHHHHhccCCceEEEEcc
Q 017431 251 DLTDGGVDYSFECIGNV-SVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 251 ~~~~gg~dvvid~~g~~-~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
....+.+|+|+.....+ ..++.+.+.|+++ |+++.+..
T Consensus 161 ~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~ 199 (258)
T 2pwy_A 161 ELEEAAYDGVALDLMEPWKVLEKAALALKPD-RFLVAYLP 199 (258)
T ss_dssp CCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEES
T ss_pred CCCCCCcCEEEECCcCHHHHHHHHHHhCCCC-CEEEEEeC
Confidence 01223799999766665 6789999999997 99987743
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00032 Score=62.19 Aligned_cols=103 Identities=21% Similarity=0.291 Sum_probs=72.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCcEE---ecCCCCCchHHHHHHhhcC--CCc
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTEF---VNPKDHDKPIQQVLVDLTD--GGV 257 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~g~~~v---i~~~~~~~~~~~~~~~~~~--gg~ 257 (371)
-+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+ .++++|.... .|..+ ..+..+.+.+... |++
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~G~i 104 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEIGGGAVGIQADSAN-LAELDRLYEKVKAEAGRI 104 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTCEEEECCTTC-HHHHHHHHHHHHHHHSCE
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeEEEEecCCC-HHHHHHHHHHHHHHcCCC
Confidence 36899999988 8999999999999999 9999999988766 4456765432 23332 1222222222222 379
Q ss_pred cEEEEccCCH-------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 258 DYSFECIGNV-------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 258 dvvid~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
|++++++|.. ...+.++..|.++ |++|.+++.
T Consensus 105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~-G~IInisS~ 161 (273)
T 4fgs_A 105 DVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARG-SSVVLTGST 161 (273)
T ss_dssp EEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE-EEEEEECCG
T ss_pred CEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhC-CeEEEEeeh
Confidence 9999988761 1356667778885 999999764
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00036 Score=62.92 Aligned_cols=96 Identities=20% Similarity=0.250 Sum_probs=71.6
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEE
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE 262 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid 262 (371)
.--.|++|+|+|+|.+|.++++.++.+|+ +|++.+++.++.+.+.++|.. .+.. .++. +.. ..+|+|+.
T Consensus 153 ~~l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~-~~~~----~~l~----~~l-~~aDvVi~ 221 (300)
T 2rir_A 153 YTIHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARSSAHLARITEMGLV-PFHT----DELK----EHV-KDIDICIN 221 (300)
T ss_dssp SCSTTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCE-EEEG----GGHH----HHS-TTCSEEEE
T ss_pred CCCCCCEEEEEcccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCe-EEch----hhHH----HHh-hCCCEEEE
Confidence 34578999999999999999999999999 999999998877766677763 2221 1222 221 26999999
Q ss_pred ccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 263 CIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 263 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+++..-.-+..++.|+++ +.+|.++..
T Consensus 222 ~~p~~~i~~~~~~~mk~g-~~lin~a~g 248 (300)
T 2rir_A 222 TIPSMILNQTVLSSMTPK-TLILDLASR 248 (300)
T ss_dssp CCSSCCBCHHHHTTSCTT-CEEEECSST
T ss_pred CCChhhhCHHHHHhCCCC-CEEEEEeCC
Confidence 988632224567788896 999988763
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00043 Score=60.09 Aligned_cols=102 Identities=18% Similarity=0.159 Sum_probs=67.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE-EecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
+|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+....-.+.. ..|..+ .+-.+.+.+.. +++|+++++
T Consensus 10 ~GK~alVTGas~GIG~aia~~la~~Ga-~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~-g~iDiLVNN 85 (242)
T 4b79_A 10 AGQQVLVTGGSSGIGAAIAMQFAELGA-EVVALGLDADGVHAPRHPRIRREELDITD--SQRLQRLFEAL-PRLDVLVNN 85 (242)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTSTTSCCCTTEEEEECCTTC--HHHHHHHHHHC-SCCSEEEEC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHhhhhcCCeEEEEecCCC--HHHHHHHHHhc-CCCCEEEEC
Confidence 6999999988 8999999999999999 8999999887654322111111 233333 33333333332 479999998
Q ss_pred cCCH-----------------------HHHHHHHHHhccCCceEEEEccCC
Q 017431 264 IGNV-----------------------SVMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 264 ~g~~-----------------------~~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
.|-. ...+.++..|..++|+||.+++..
T Consensus 86 AGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~ 136 (242)
T 4b79_A 86 AGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMY 136 (242)
T ss_dssp CCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGG
T ss_pred CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeecc
Confidence 8741 124555666654349999997643
|
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* | Back alignment and structure |
|---|
Probab=97.43 E-value=0.0002 Score=68.12 Aligned_cols=91 Identities=26% Similarity=0.326 Sum_probs=70.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
-.|++|+|+|+|.+|.+.++.++..|+ +|+++++++.+...+...+.+ +.+.. +. -..+|+++++.
T Consensus 263 L~GKtVvVtGaGgIG~aiA~~Laa~GA-~Viv~D~~~~~a~~Aa~~g~d-v~~le-----------e~-~~~aDvVi~at 328 (488)
T 3ond_A 263 IAGKVAVVAGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQATMEGLQ-VLTLE-----------DV-VSEADIFVTTT 328 (488)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-ECCGG-----------GT-TTTCSEEEECS
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHhCCc-cCCHH-----------HH-HHhcCEEEeCC
Confidence 579999999999999999999999999 999999998887777776652 21111 11 12699999999
Q ss_pred CCHHHH-HHHHHHhccCCceEEEEccC
Q 017431 265 GNVSVM-RAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 265 g~~~~~-~~~~~~l~~~~G~iv~~g~~ 290 (371)
|....+ ...++.|+++ +.++..|..
T Consensus 329 G~~~vl~~e~l~~mk~g-aiVvNaG~~ 354 (488)
T 3ond_A 329 GNKDIIMLDHMKKMKNN-AIVCNIGHF 354 (488)
T ss_dssp SCSCSBCHHHHTTSCTT-EEEEESSST
T ss_pred CChhhhhHHHHHhcCCC-eEEEEcCCC
Confidence 976655 4478889996 888888764
|
| >1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00094 Score=59.25 Aligned_cols=104 Identities=22% Similarity=0.300 Sum_probs=71.8
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhc-----C--CcEE-ecCCCCCchHHHH
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNF-----G--VTEF-VNPKDHDKPIQQV 248 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~v~~v~~~~~~~~~~~~~-----g--~~~v-i~~~~~~~~~~~~ 248 (371)
+.....+.++++||-+|+| .|..+..+++..+ ..+|++++.+++..+.+++. | ...+ +...+ ..+.
T Consensus 91 i~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d----~~~~ 165 (280)
T 1i9g_A 91 IVHEGDIFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSD----LADS 165 (280)
T ss_dssp HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSC----GGGC
T ss_pred HHHHcCCCCCCEEEEEccc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECc----hHhc
Confidence 4456678899999999998 7888889998764 34999999999887776543 4 2211 21111 1100
Q ss_pred HHhhcCCCccEEEEccCCH-HHHHHHHHHhccCCceEEEEcc
Q 017431 249 LVDLTDGGVDYSFECIGNV-SVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 249 ~~~~~~gg~dvvid~~g~~-~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
....+.+|+|+.....+ ..++.+.+.|+++ |+++.+..
T Consensus 166 --~~~~~~~D~v~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~ 204 (280)
T 1i9g_A 166 --ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAG-GVLMVYVA 204 (280)
T ss_dssp --CCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEES
T ss_pred --CCCCCceeEEEECCcCHHHHHHHHHHhCCCC-CEEEEEeC
Confidence 01123799999766654 6789999999997 99887743
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.0019 Score=50.93 Aligned_cols=76 Identities=20% Similarity=0.291 Sum_probs=57.5
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEe-cCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi-~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
..+|+|+|+|.+|...++.+...|. +|+++++++++.+.+++.+...+. +..+ . +.+.+..-.++|+++.+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~~~~~~~gd~~~--~---~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDEGFDAVIADPTD--E---SFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEECCTTC--H---HHHHHSCCTTCSEEEECCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCCcEEECCCCC--H---HHHHhCCcccCCEEEEecC
Confidence 4679999999999999999999999 899999999998888877764332 2222 2 2344432237999999999
Q ss_pred CHH
Q 017431 266 NVS 268 (371)
Q Consensus 266 ~~~ 268 (371)
+..
T Consensus 80 ~~~ 82 (141)
T 3llv_A 80 DDE 82 (141)
T ss_dssp CHH
T ss_pred CHH
Confidence 754
|
| >2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0019 Score=53.84 Aligned_cols=99 Identities=18% Similarity=0.222 Sum_probs=66.2
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCC---------CeEEEEcCChhhHHHHHhcCCcEEe-cCCCCCchHHHHHHhh
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAGA---------SRVIGIDIDPKKFDRAKNFGVTEFV-NPKDHDKPIQQVLVDL 252 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~---------~~v~~v~~~~~~~~~~~~~g~~~vi-~~~~~~~~~~~~~~~~ 252 (371)
.++++++||.+|+|+ |..+..+++..|. .+|++++.++... +.....+ ..+-........+.+.
T Consensus 19 ~~~~~~~vLDlGcG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~ 92 (196)
T 2nyu_A 19 ILRPGLRVLDCGAAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-----LEGATFLCPADVTDPRTSQRILEV 92 (196)
T ss_dssp CCCTTCEEEEETCCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-----CTTCEEECSCCTTSHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCC-CHHHHHHHHHhccccccccCCCceEEEEechhccc-----CCCCeEEEeccCCCHHHHHHHHHh
Confidence 367899999999987 9999999999874 4899999887531 1112233 2221123334444444
Q ss_pred cCC-CccEEEE-----ccCCH------------HHHHHHHHHhccCCceEEEEc
Q 017431 253 TDG-GVDYSFE-----CIGNV------------SVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 253 ~~g-g~dvvid-----~~g~~------------~~~~~~~~~l~~~~G~iv~~g 288 (371)
.++ .||+|+. +++.. ..++.+.+.|+++ |+++...
T Consensus 93 ~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~ 145 (196)
T 2nyu_A 93 LPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPG-GTFLCKT 145 (196)
T ss_dssp SGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred cCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCC-CEEEEEe
Confidence 444 8999994 33432 4577889999997 9998763
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0034 Score=54.96 Aligned_cols=105 Identities=28% Similarity=0.257 Sum_probs=68.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHH----HHhcCCcEEecCCCC--CchHHHHHHhhcC--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR----AKNFGVTEFVNPKDH--DKPIQQVLVDLTD--GG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~----~~~~g~~~vi~~~~~--~~~~~~~~~~~~~--gg 256 (371)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+. +++.|........+. ..+..+.+.+... |+
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 86 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIH 86 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence 6899999987 8999999999999999 99999998876543 234454433222221 1223333333322 37
Q ss_pred ccEEEEccCCH-------------------------HHHHHHHHHhc--cCCceEEEEccCC
Q 017431 257 VDYSFECIGNV-------------------------SVMRAALECCH--KGWGTSVIVGVAA 291 (371)
Q Consensus 257 ~dvvid~~g~~-------------------------~~~~~~~~~l~--~~~G~iv~~g~~~ 291 (371)
+|++++++|.. ...+.++..|. .++|+||.+++..
T Consensus 87 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~ 148 (255)
T 4g81_D 87 VDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLT 148 (255)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGG
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehh
Confidence 99999998851 13455666662 2249999998743
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0013 Score=51.78 Aligned_cols=76 Identities=21% Similarity=0.396 Sum_probs=53.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCC
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 266 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~ 266 (371)
+++|+|+|+|.+|...++.+...|+ +|+++++++++.+.+++.+...+. ... .+ .+.+.+..-+++|+++.+++.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~-~d~--~~-~~~l~~~~~~~~d~vi~~~~~ 80 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHAVI-ANA--TE-ENELLSLGIRNFEYVIVAIGA 80 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHTTTTTCSEEEE-CCT--TC-HHHHHTTTGGGCSEEEECCCS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCEEEE-eCC--CC-HHHHHhcCCCCCCEEEECCCC
Confidence 4679999999999999999999998 788999988877766666653322 111 11 223333312379999999997
Q ss_pred H
Q 017431 267 V 267 (371)
Q Consensus 267 ~ 267 (371)
.
T Consensus 81 ~ 81 (144)
T 2hmt_A 81 N 81 (144)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0022 Score=56.40 Aligned_cols=102 Identities=20% Similarity=0.316 Sum_probs=64.2
Q ss_pred CCCEEEEEcC-Ch--HHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCC--cEE--ecCCCCCchHHHHHHhhcC
Q 017431 186 PGSIVAVFGL-GT--VGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGV--TEF--VNPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~--vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~--~~v--i~~~~~~~~~~~~~~~~~~ 254 (371)
+++++||+|+ |. +|.+.++.+...|+ +|++++++++..+.++ +++. ... .|..+ .....+.+.+...
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~ 83 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTN-DAEIETCFASIKE 83 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSS-SHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCC-HHHHHHHHHHHHH
Confidence 5789999987 66 99998888888899 8999888765444333 3333 112 23333 1333333333322
Q ss_pred --CCccEEEEccCCH-----------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 255 --GGVDYSFECIGNV-----------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 255 --gg~dvvid~~g~~-----------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+.+|++++++|.. .+.+.++..+.++ |++|.+++.
T Consensus 84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~isS~ 149 (266)
T 3oig_A 84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEG-GSIVTLTYL 149 (266)
T ss_dssp HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTC-EEEEEEECG
T ss_pred HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-ceEEEEecc
Confidence 3799999987731 1234455556665 999999764
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0033 Score=54.07 Aligned_cols=97 Identities=15% Similarity=0.160 Sum_probs=65.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC-cEEe-cCCCCCchHHHHHHhhcCCCccEEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV-TEFV-NPKDHDKPIQQVLVDLTDGGVDYSFE 262 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~-~~vi-~~~~~~~~~~~~~~~~~~gg~dvvid 262 (371)
.+.+|||+|+ |.+|.+.++.+...|+ +|+++++++++.+.+.+.++ ..+. |.. +.+.+.. +++|++|+
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~-------~~~~~~~-~~~D~vi~ 90 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNEEQGPELRERGASDIVVANLE-------EDFSHAF-ASIDAVVF 90 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHTTCSEEEECCTT-------SCCGGGG-TTCSEEEE
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECChHHHHHHHhCCCceEEEcccH-------HHHHHHH-cCCCEEEE
Confidence 4689999988 9999999999999999 99999999988877766666 3321 211 1222222 27999999
Q ss_pred ccCCHH-------------HHHHHHHHhc-cCCceEEEEccCC
Q 017431 263 CIGNVS-------------VMRAALECCH-KGWGTSVIVGVAA 291 (371)
Q Consensus 263 ~~g~~~-------------~~~~~~~~l~-~~~G~iv~~g~~~ 291 (371)
++|... ....+++.+. .+.+++|.+++..
T Consensus 91 ~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~ 133 (236)
T 3e8x_A 91 AAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVG 133 (236)
T ss_dssp CCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTT
T ss_pred CCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCC
Confidence 988521 1223333333 2237899988754
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.17 E-value=0.0029 Score=54.62 Aligned_cols=102 Identities=14% Similarity=0.151 Sum_probs=64.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCcE-E--ecCCCCCchHHHHHHhhcC--CCccE
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTE-F--VNPKDHDKPIQQVLVDLTD--GGVDY 259 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~-v--i~~~~~~~~~~~~~~~~~~--gg~dv 259 (371)
++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+. +++... . .|..+ .....+.+.+... +++|+
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~id~ 80 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGH-QVSMMGRRYQRLQQQELLLGNAVIGIVADLAH-HEDVDVAFAAAVEWGGLPEL 80 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTS-HHHHHHHHHHHHHHHCSCSE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCceEEECCCCC-HHHHHHHHHHHHHhcCCCcE
Confidence 578999988 9999999988888999 8999999887765443 333221 1 23322 1222222222221 37999
Q ss_pred EEEccCCH-------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 260 SFECIGNV-------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 260 vid~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
++++.|.. .+.+.++..|....|++|.+++.
T Consensus 81 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~ 136 (235)
T 3l6e_A 81 VLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSS 136 (235)
T ss_dssp EEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCE
T ss_pred EEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCH
Confidence 99988741 12345555565433788888764
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0041 Score=54.41 Aligned_cols=104 Identities=16% Similarity=0.240 Sum_probs=67.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~~--g 255 (371)
+|+++||+|+ +++|.+.++.+-..|+ +|+.+++++++.+.+ ++.|.... .|..+ ..+..+.+.+... |
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~-~~~v~~~~~~~~~~~G 83 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSK-KKDVEEFVRRTFETYS 83 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 5799999988 8999998888888999 899999998876533 34555432 23332 1222222322222 3
Q ss_pred CccEEEEccCC--H------------------------HHHHHHHHHhc-cCCceEEEEccCC
Q 017431 256 GVDYSFECIGN--V------------------------SVMRAALECCH-KGWGTSVIVGVAA 291 (371)
Q Consensus 256 g~dvvid~~g~--~------------------------~~~~~~~~~l~-~~~G~iv~~g~~~ 291 (371)
+.|++++++|. . ...+.++..|. .++|+||.+++..
T Consensus 84 ~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~ 146 (254)
T 4fn4_A 84 RIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIA 146 (254)
T ss_dssp CCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechh
Confidence 79999998873 0 13455666553 2349999997643
|
| >3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00059 Score=63.94 Aligned_cols=93 Identities=20% Similarity=0.274 Sum_probs=70.8
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEE
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE 262 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid 262 (371)
..-.|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|... . ++.+.+. ..|+++.
T Consensus 207 ~~L~GktVgIiG~G~IG~~vA~~Lka~Ga-~Viv~D~~p~~a~~A~~~G~~~-~-------sL~eal~-----~ADVVil 272 (436)
T 3h9u_A 207 VMIAGKTACVCGYGDVGKGCAAALRGFGA-RVVVTEVDPINALQAAMEGYQV-L-------LVEDVVE-----EAHIFVT 272 (436)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE-C-------CHHHHTT-----TCSEEEE
T ss_pred CcccCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCChhhhHHHHHhCCee-c-------CHHHHHh-----hCCEEEE
Confidence 34579999999999999999999999999 8999999888776677777532 1 2222222 5899999
Q ss_pred ccCCHHHHH-HHHHHhccCCceEEEEccC
Q 017431 263 CIGNVSVMR-AALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 263 ~~g~~~~~~-~~~~~l~~~~G~iv~~g~~ 290 (371)
+.+....+. ..++.|+++ +.++.++..
T Consensus 273 t~gt~~iI~~e~l~~MK~g-AIVINvgRg 300 (436)
T 3h9u_A 273 TTGNDDIITSEHFPRMRDD-AIVCNIGHF 300 (436)
T ss_dssp CSSCSCSBCTTTGGGCCTT-EEEEECSSS
T ss_pred CCCCcCccCHHHHhhcCCC-cEEEEeCCC
Confidence 887755443 677888996 888888653
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0029 Score=55.52 Aligned_cols=103 Identities=14% Similarity=0.065 Sum_probs=66.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH---HhcCCcEE---ecCCCCCchHHHHHHhhcC--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA---KNFGVTEF---VNPKDHDKPIQQVLVDLTD--GG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~---~~~g~~~v---i~~~~~~~~~~~~~~~~~~--gg 256 (371)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ .+.+.... .|..+ ..+..+.+.+... |+
T Consensus 6 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~v~~~~~~~G~ 83 (258)
T 4gkb_A 6 QDKVVIVTGGASGIGGAISMRLAEERA-IPVVFARHAPDGAFLDALAQRQPRATYLPVELQD-DAQCRDAVAQTIATFGR 83 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTC-HHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCcccHHHHHHHHhcCCCEEEEEeecCC-HHHHHHHHHHHHHHhCC
Confidence 6899999988 8999998888888999 888888877654433 33443222 23333 1222222333222 47
Q ss_pred ccEEEEccCCH------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 257 VDYSFECIGNV------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 257 ~dvvid~~g~~------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+|+++++.|-. ...+.++..|..++|+||.+++.
T Consensus 84 iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~ 141 (258)
T 4gkb_A 84 LDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSK 141 (258)
T ss_dssp CCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCT
T ss_pred CCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeeh
Confidence 99999998741 12455566665434999999764
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0035 Score=54.48 Aligned_cols=81 Identities=17% Similarity=0.136 Sum_probs=53.3
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEEecCCCC-CchHHHHHHhhcCCCccEE
Q 017431 184 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVNPKDH-DKPIQQVLVDLTDGGVDYS 260 (371)
Q Consensus 184 ~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~vi~~~~~-~~~~~~~~~~~~~gg~dvv 260 (371)
..++++|||+|+ |++|.+.+..+...|+ +|+++++++++.+.+ +++.....+...+. +.+....+.+.. +++|++
T Consensus 11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~id~l 88 (249)
T 3f9i_A 11 DLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKT-SNLDIL 88 (249)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTC-SCCSEE
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhc-CCCCEE
Confidence 457889999988 9999999988888999 899999988876644 34443322222221 122222222222 379999
Q ss_pred EEccCC
Q 017431 261 FECIGN 266 (371)
Q Consensus 261 id~~g~ 266 (371)
++++|.
T Consensus 89 i~~Ag~ 94 (249)
T 3f9i_A 89 VCNAGI 94 (249)
T ss_dssp EECCC-
T ss_pred EECCCC
Confidence 998884
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0045 Score=53.82 Aligned_cols=80 Identities=25% Similarity=0.345 Sum_probs=53.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEEecCCCC-Cc-hHHHHHHhhcC--CCccE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVNPKDH-DK-PIQQVLVDLTD--GGVDY 259 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~vi~~~~~-~~-~~~~~~~~~~~--gg~dv 259 (371)
+|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+ ++++........+. +. ...+.+.+... +++|+
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 83 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDI 83 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence 5789999988 9999999999999999 899999988776543 45555433222221 12 22222222211 37999
Q ss_pred EEEccCC
Q 017431 260 SFECIGN 266 (371)
Q Consensus 260 vid~~g~ 266 (371)
++++.|.
T Consensus 84 lv~nAg~ 90 (247)
T 3rwb_A 84 LVNNASI 90 (247)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9998884
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0035 Score=54.53 Aligned_cols=99 Identities=23% Similarity=0.177 Sum_probs=66.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh--hhHHHHHhcCCcEEe---cCCCCCchHHHHHHhhcC-CCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP--KKFDRAKNFGVTEFV---NPKDHDKPIQQVLVDLTD-GGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~--~~~~~~~~~g~~~vi---~~~~~~~~~~~~~~~~~~-gg~d 258 (371)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++ +..+.+++.|..... |..+ .. .+++... +++|
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d--~~---~v~~~~~~g~iD 81 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAPDETLDIIAKDGGNASALLIDFAD--PL---AAKDSFTDAGFD 81 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTS--TT---TTTTSSTTTCCC
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCC--HH---HHHHHHHhCCCC
Confidence 5899999987 8999999999999999 888888775 345566677764432 2222 11 1222222 4899
Q ss_pred EEEEccCCH-------------------------HHHHHHHHHhc-c-CCceEEEEccC
Q 017431 259 YSFECIGNV-------------------------SVMRAALECCH-K-GWGTSVIVGVA 290 (371)
Q Consensus 259 vvid~~g~~-------------------------~~~~~~~~~l~-~-~~G~iv~~g~~ 290 (371)
+.+++.|.. ...+.+++.|. . .+|+||.+++.
T Consensus 82 iLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~ 140 (247)
T 4hp8_A 82 ILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASL 140 (247)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG
T ss_pred EEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEech
Confidence 999998851 12445555552 2 13999999764
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0023 Score=56.07 Aligned_cols=102 Identities=20% Similarity=0.219 Sum_probs=66.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEE---ecCCCCCchHHHHHHhhc--CCCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~v---i~~~~~~~~~~~~~~~~~--~gg~d 258 (371)
+|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+ ++++.... .|..+ .......+.+.. .+++|
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~id 84 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEFGPRVHALRSDIAD-LNEIAVLGAAAGQTLGAID 84 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTC-HHHHHHHHHHHHHHHSSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCC-HHHHHHHHHHHHHHhCCCC
Confidence 5789999988 9999999998889999 899999988876544 34443322 23322 122222222221 13799
Q ss_pred EEEEccCCH----------H---------------HHHHHHHHhccCCceEEEEccC
Q 017431 259 YSFECIGNV----------S---------------VMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 259 vvid~~g~~----------~---------------~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+++++.|.. + +.+.++..+.++ |+||.+++.
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~isS~ 140 (255)
T 4eso_A 85 LLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREG-GSIVFTSSV 140 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEECCG
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC-CEEEEECCh
Confidence 999988741 1 234445556675 999999764
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0041 Score=54.46 Aligned_cols=79 Identities=11% Similarity=0.262 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCc--EE--ecCCCCCchHHHHHHhhcC
Q 017431 186 PGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVT--EF--VNPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g--~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~--~v--i~~~~~~~~~~~~~~~~~~ 254 (371)
+|+++||+|+ | ++|.+.++.+...|+ +|+.++++++..+.+ ++++.. .. .|..+ ..+..+.+.+...
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~ 82 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQS-DEEVINGFEQIGK 82 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTC-HHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCC-HHHHHHHHHHHHH
Confidence 5899999987 5 799999988889999 899999987765433 344432 12 23333 1222222222221
Q ss_pred --CCccEEEEccCC
Q 017431 255 --GGVDYSFECIGN 266 (371)
Q Consensus 255 --gg~dvvid~~g~ 266 (371)
|++|+++++.|.
T Consensus 83 ~~G~iD~lvnnAg~ 96 (256)
T 4fs3_A 83 DVGNIDGVYHSIAF 96 (256)
T ss_dssp HHCCCSEEEECCCC
T ss_pred HhCCCCEEEecccc
Confidence 479999998773
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0053 Score=54.07 Aligned_cols=79 Identities=30% Similarity=0.330 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHH-HHhcCCcEEe---cCCCCCchHHHHHHhhcC--CCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR-AKNFGVTEFV---NPKDHDKPIQQVLVDLTD--GGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~-~~~~g~~~vi---~~~~~~~~~~~~~~~~~~--gg~d 258 (371)
+|+++||+|+ |++|.+.++.+...|+ +|+.+++++++.+. +++++....+ |..+ .....+.+.+... +++|
T Consensus 26 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD 103 (266)
T 3grp_A 26 TGRKALVTGATGGIGEAIARCFHAQGA-IVGLHGTREDKLKEIAADLGKDVFVFSANLSD-RKSIKQLAEVAEREMEGID 103 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTS-HHHHHHHHHHHHHHHTSCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEeecCC-HHHHHHHHHHHHHHcCCCC
Confidence 5789999988 9999999999999999 89999888877654 4456653322 2222 1222222222221 3799
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
++++++|.
T Consensus 104 ~lvnnAg~ 111 (266)
T 3grp_A 104 ILVNNAGI 111 (266)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999885
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=97.03 E-value=0.007 Score=52.73 Aligned_cols=81 Identities=19% Similarity=0.159 Sum_probs=51.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc----C--CcE-EecCCCCCch-HHHHHHhhc-
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF----G--VTE-FVNPKDHDKP-IQQVLVDLT- 253 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~----g--~~~-vi~~~~~~~~-~~~~~~~~~- 253 (371)
-+++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ++ + ... ..|....+.. ..+.+.+..
T Consensus 10 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (252)
T 3f1l_A 10 LNDRIILVTGASDGIGREAAMTYARYGA-TVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV 88 (252)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence 46789999988 9999999988888999 8999999887655332 21 2 111 2233111122 222222221
Q ss_pred -CCCccEEEEccCC
Q 017431 254 -DGGVDYSFECIGN 266 (371)
Q Consensus 254 -~gg~dvvid~~g~ 266 (371)
.+++|++++++|.
T Consensus 89 ~~g~id~lv~nAg~ 102 (252)
T 3f1l_A 89 NYPRLDGVLHNAGL 102 (252)
T ss_dssp HCSCCSEEEECCCC
T ss_pred hCCCCCEEEECCcc
Confidence 2379999998874
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0047 Score=54.07 Aligned_cols=79 Identities=23% Similarity=0.318 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHH-HHhcCCcEE---ecCCCCCchHHHHHHhhc--CCCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR-AKNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~-~~~~g~~~v---i~~~~~~~~~~~~~~~~~--~gg~d 258 (371)
+++++||+|+ |++|.+.++.+...|+ +|++++++.++.+. .++++.... .|..+ .....+.+.+.. .+++|
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~id 84 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEIGPAAYAVQMDVTR-QDSIDAAIAATVEHAGGLD 84 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTC-HHHHHHHHHHHHHHSSSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCceEEEeeCCC-HHHHHHHHHHHHHHcCCCC
Confidence 5789999988 9999999988888999 89999988876554 345544322 23332 122222232221 23799
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
++++++|.
T Consensus 85 ~lv~~Ag~ 92 (259)
T 4e6p_A 85 ILVNNAAL 92 (259)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 99999884
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0071 Score=52.76 Aligned_cols=77 Identities=16% Similarity=0.204 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcEE---ecCCCCCchH---HHHHHhhcC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF---VNPKDHDKPI---QQVLVDLTD 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~v---i~~~~~~~~~---~~~~~~~~~ 254 (371)
+++++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+. +.+.... .|..+ .... .+.+.+.
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~-- 81 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARN-EDEVTAFLNAADAH-- 81 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHHH--
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCC-HHHHHHHHHHHHhh--
Confidence 5789999988 8999999999989999 8999999887655332 2344222 23322 1122 2223333
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|+++++.|.
T Consensus 82 g~id~lv~nAg~ 93 (252)
T 3h7a_A 82 APLEVTIFNVGA 93 (252)
T ss_dssp SCEEEEEECCCC
T ss_pred CCceEEEECCCc
Confidence 579999998884
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0042 Score=55.19 Aligned_cols=102 Identities=22% Similarity=0.262 Sum_probs=64.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh-HH----HHHhcCCcEE---ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-FD----RAKNFGVTEF---VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~-~~----~~~~~g~~~v---i~~~~~~~~~~~~~~~~~~-- 254 (371)
+++++||+|+ |++|.+.++.+...|+ +|++++++.++ .+ .+++.+.... .|..+ .......+.+...
T Consensus 28 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 105 (283)
T 1g0o_A 28 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGV-VEDIVRMFEEAVKIF 105 (283)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4689999988 9999999999989999 88888777543 22 2334454322 23222 1222222222211
Q ss_pred CCccEEEEccCCH----------H---------------HHHHHHHHhccCCceEEEEccC
Q 017431 255 GGVDYSFECIGNV----------S---------------VMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 255 gg~dvvid~~g~~----------~---------------~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+++|+++++.|.. + +.+.+++.|..+ |++|.+++.
T Consensus 106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~ 165 (283)
T 1g0o_A 106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG-GRLILMGSI 165 (283)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT-CEEEEECCG
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC-CeEEEEech
Confidence 3799999988741 1 235556666564 999999764
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0061 Score=54.04 Aligned_cols=103 Identities=21% Similarity=0.245 Sum_probs=66.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEE---ecCCCCCchHHHHHHhhcC--CCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF---VNPKDHDKPIQQVLVDLTD--GGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~v---i~~~~~~~~~~~~~~~~~~--gg~d 258 (371)
+++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++++.... .|..+ .....+.+.+... +++|
T Consensus 26 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD 103 (277)
T 4dqx_A 26 NQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADVNEDAAVRVANEIGSKAFGVRVDVSS-AKDAESMVEKTTAKWGRVD 103 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCTTEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence 4789999988 9999999998889999 899999988766543 44554332 23332 1222222322221 3799
Q ss_pred EEEEccCC----------HH---------------HHHHHHHHhcc-CCceEEEEccC
Q 017431 259 YSFECIGN----------VS---------------VMRAALECCHK-GWGTSVIVGVA 290 (371)
Q Consensus 259 vvid~~g~----------~~---------------~~~~~~~~l~~-~~G~iv~~g~~ 290 (371)
++++++|. .+ +.+.++..|.. +.|+||.+++.
T Consensus 104 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~ 161 (277)
T 4dqx_A 104 VLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSY 161 (277)
T ss_dssp EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCG
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECch
Confidence 99999883 11 23455555543 23799988764
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0049 Score=55.08 Aligned_cols=102 Identities=18% Similarity=0.244 Sum_probs=64.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh-HH----HHHhcCCcEEe---cCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-FD----RAKNFGVTEFV---NPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~-~~----~~~~~g~~~vi---~~~~~~~~~~~~~~~~~~-- 254 (371)
+|+++||+|+ |++|.+.++.+...|+ +|+++++++++ .+ .+++.+....+ |..+ .....+.+.+...
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSD-EQHCKDIVQETVRQL 123 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTS-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 5789999988 9999999999889999 88888877643 22 23344543322 3322 1222222222221
Q ss_pred CCccEEEEccCCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 255 GGVDYSFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 255 gg~dvvid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+++|++++++|.. .+.+.++..|.++ |+||.+++.
T Consensus 124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-g~iv~isS~ 184 (291)
T 3ijr_A 124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQG-DVIINTASI 184 (291)
T ss_dssp SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTT-CEEEEECCT
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhC-CEEEEEech
Confidence 3799999987631 1244455556675 999988763
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0035 Score=55.27 Aligned_cols=79 Identities=14% Similarity=0.150 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE-EecCCCCCchHHHHHHhhcC--CCccEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTD--GGVDYSF 261 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~~~~~~~~--gg~dvvi 261 (371)
.++++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+..-.... ..|..+ .....+.+.+... +++|+++
T Consensus 15 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD~lv 92 (266)
T 3p19_A 15 MKKLVVITGASSGIGEAIARRFSEEGH-PLLLLARRVERLKALNLPNTLCAQVDVTD-KYTFDTAITRAEKIYGPADAIV 92 (266)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHTTCCTTEEEEECCTTC-HHHHHHHHHHHHHHHCSEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHhhcCCceEEEecCCC-HHHHHHHHHHHHHHCCCCCEEE
Confidence 4689999988 9999999998888999 8999988877654332211111 123332 1222222322221 3799999
Q ss_pred EccCC
Q 017431 262 ECIGN 266 (371)
Q Consensus 262 d~~g~ 266 (371)
+++|.
T Consensus 93 nnAg~ 97 (266)
T 3p19_A 93 NNAGM 97 (266)
T ss_dssp ECCCC
T ss_pred ECCCc
Confidence 98884
|
| >1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A* | Back alignment and structure |
|---|
Probab=96.95 E-value=0.003 Score=57.88 Aligned_cols=100 Identities=28% Similarity=0.276 Sum_probs=66.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE------------ecCCCCCchH-HHHHHh
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF------------VNPKDHDKPI-QQVLVD 251 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v------------i~~~~~~~~~-~~~~~~ 251 (371)
.+|++|.|.|.|.+|..+++.++.+|+ +|++.+.+.++.++++++++..+ +.+....... .+.+..
T Consensus 173 L~GktV~I~G~GnVG~~~A~~l~~~Ga-kVvvsD~~~~~~~~a~~~ga~~v~~~ell~~~~DIliP~A~~~~I~~~~~~~ 251 (355)
T 1c1d_A 173 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTAVALEDVLSTPCDVFAPCAMGGVITTEVART 251 (355)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEECCGGGGGGCCCSEEEECSCSCCBCHHHHHH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHhcCCEEeChHHhhcCccceecHhHHHhhcCHHHHhh
Confidence 589999999999999999999999999 88888888777666777775322 0000000000 111111
Q ss_pred hcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEcc
Q 017431 252 LTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 252 ~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
+ +.++++++++.+-+.+.+.+.|..+ |.++.-+.
T Consensus 252 l---k~~iVie~AN~p~t~~eA~~~L~~~-gIlv~Pd~ 285 (355)
T 1c1d_A 252 L---DCSVVAGAANNVIADEAASDILHAR-GILYAPDF 285 (355)
T ss_dssp C---CCSEECCSCTTCBCSHHHHHHHHHT-TCEECCHH
T ss_pred C---CCCEEEECCCCCCCCHHHHHHHHhC-CEEEECCe
Confidence 1 5778888887754334667778875 77665443
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0058 Score=54.89 Aligned_cols=79 Identities=25% Similarity=0.351 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcEE---ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF---VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~v---i~~~~~~~~~~~~~~~~~~--g 255 (371)
.|++|||+|+ |++|.+.+..+...|+ +|+++++++++.+.+. +.+.... .|..+ .....+.+.+... +
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 107 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRH-LDEMVRLADEAFRLLG 107 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhCC
Confidence 5789999988 9999999998889999 8999999887755432 2343322 23333 1222222322221 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|++++++|.
T Consensus 108 ~id~lvnnAg~ 118 (301)
T 3tjr_A 108 GVDVVFSNAGI 118 (301)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 79999999883
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.011 Score=50.74 Aligned_cols=79 Identities=15% Similarity=0.237 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-----hcCCcEE---ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-----NFGVTEF---VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-----~~g~~~v---i~~~~~~~~~~~~~~~~~~-- 254 (371)
+++++||+|+ |++|.+.++.+...|+ +|+.++++.++.+.+. +.+.... .|..+ .....+.+.+...
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~ 78 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDGY-ALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSK-AESVEEFSKKVLERF 78 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC-HHHHHHHCC-HHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCC-HHHHHHHHHHHHHhc
Confidence 3678999988 9999999999999999 8999999887654332 3343332 23322 1112222111111
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|++++++|.
T Consensus 79 g~id~li~~Ag~ 90 (235)
T 3l77_A 79 GDVDVVVANAGL 90 (235)
T ss_dssp SSCSEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 379999998874
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0037 Score=56.74 Aligned_cols=78 Identities=19% Similarity=0.195 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCC--c-EE--ecCCCCCchHHHHHHhhc--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGV--T-EF--VNPKDHDKPIQQVLVDLT-- 253 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~--~-~v--i~~~~~~~~~~~~~~~~~-- 253 (371)
.+++|||+|+ |++|.+.++.+...|+ +|++++++.++.+.+. ..+. . .+ .|..+ ...+.+.+.+..
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~ 84 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVAS-REGFKMAADEVEAR 84 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCC-HHHHHHHHHHHHHh
Confidence 5789999988 9999999988888999 8999999887655432 2232 1 11 23333 122333333222
Q ss_pred CCCccEEEEccC
Q 017431 254 DGGVDYSFECIG 265 (371)
Q Consensus 254 ~gg~dvvid~~g 265 (371)
.+++|+++++.|
T Consensus 85 ~g~id~lv~nAg 96 (319)
T 3ioy_A 85 FGPVSILCNNAG 96 (319)
T ss_dssp TCCEEEEEECCC
T ss_pred CCCCCEEEECCC
Confidence 247999999988
|
| >3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0049 Score=51.96 Aligned_cols=100 Identities=20% Similarity=0.222 Sum_probs=69.1
Q ss_pred hhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCc-E--EecCCCCCchHHHHHHh
Q 017431 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT-E--FVNPKDHDKPIQQVLVD 251 (371)
Q Consensus 179 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~-~--vi~~~~~~~~~~~~~~~ 251 (371)
.....+.++++||-+|+|. |..++.+++. +. +|++++.+++..+.+++ +|.. . ++..+- .+ .+..
T Consensus 48 l~~l~~~~~~~vLDlGcG~-G~~~~~la~~-~~-~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~--~~---~~~~ 119 (204)
T 3njr_A 48 LAALAPRRGELLWDIGGGS-GSVSVEWCLA-GG-RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTA--PA---ALAD 119 (204)
T ss_dssp HHHHCCCTTCEEEEETCTT-CHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCT--TG---GGTT
T ss_pred HHhcCCCCCCEEEEecCCC-CHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCch--hh---hccc
Confidence 3455678899999999975 8888888888 77 99999999988777654 4543 2 222111 11 0111
Q ss_pred hcCCCccEEEEccCC-HHHHHHHHHHhccCCceEEEEcc
Q 017431 252 LTDGGVDYSFECIGN-VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 252 ~~~gg~dvvid~~g~-~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
...+|+|+...+. ...++.+.+.|+++ |+++....
T Consensus 120 --~~~~D~v~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~ 155 (204)
T 3njr_A 120 --LPLPEAVFIGGGGSQALYDRLWEWLAPG-TRIVANAV 155 (204)
T ss_dssp --SCCCSEEEECSCCCHHHHHHHHHHSCTT-CEEEEEEC
T ss_pred --CCCCCEEEECCcccHHHHHHHHHhcCCC-cEEEEEec
Confidence 1269999965443 33789999999997 99987644
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0082 Score=53.00 Aligned_cols=102 Identities=22% Similarity=0.321 Sum_probs=63.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHH----HHhcCCcEE---ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDR----AKNFGVTEF---VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~-~~~~~~~----~~~~g~~~v---i~~~~~~~~~~~~~~~~~~-- 254 (371)
.|+++||+|+ |++|.+.++.+...|+ +|+++++ ++++.+. +++.+.... .|..+ .....+.+.+...
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 107 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRD-AEAIEQAIRETVEAL 107 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 5789999988 9999999998888999 7877744 4343332 233454332 23222 1222223332222
Q ss_pred CCccEEEEccCCH-------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 255 GGVDYSFECIGNV-------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 255 gg~dvvid~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+++|++++++|.. .+.+.++..|.++ |++|.+++.
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-g~iv~isS~ 167 (271)
T 3v2g_A 108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDG-GRIITIGSN 167 (271)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT-CEEEEECCG
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CEEEEEeCh
Confidence 3799999988741 1345566667775 999999763
|
| >3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0078 Score=50.45 Aligned_cols=101 Identities=15% Similarity=0.207 Sum_probs=70.6
Q ss_pred hhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCcE--EecCCCCCchHHHHHHhh
Q 017431 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLVDL 252 (371)
Q Consensus 179 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~~--vi~~~~~~~~~~~~~~~~ 252 (371)
....+++++++||-+|+|. |..++.+++.....+|++++.+++..+.+++ .+... ++...- .+ ..
T Consensus 33 l~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~-----~~---~~ 103 (204)
T 3e05_A 33 LSKLRLQDDLVMWDIGAGS-ASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFA-----PE---GL 103 (204)
T ss_dssp HHHTTCCTTCEEEEETCTT-CHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCT-----TT---TC
T ss_pred HHHcCCCCCCEEEEECCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCCh-----hh---hh
Confidence 4556788999999999984 8888899988644499999999988777754 34322 222111 00 11
Q ss_pred cC-CCccEEEEccC---CHHHHHHHHHHhccCCceEEEEcc
Q 017431 253 TD-GGVDYSFECIG---NVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 253 ~~-gg~dvvid~~g---~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
.. +.+|+|+.... -...++.+.+.|+++ |+++....
T Consensus 104 ~~~~~~D~i~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~ 143 (204)
T 3e05_A 104 DDLPDPDRVFIGGSGGMLEEIIDAVDRRLKSE-GVIVLNAV 143 (204)
T ss_dssp TTSCCCSEEEESCCTTCHHHHHHHHHHHCCTT-CEEEEEEC
T ss_pred hcCCCCCEEEECCCCcCHHHHHHHHHHhcCCC-eEEEEEec
Confidence 11 36999997654 246689999999997 99987643
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.90 E-value=0.004 Score=54.34 Aligned_cols=103 Identities=17% Similarity=0.227 Sum_probs=65.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEE-e--cCCCCCchHHHHHHhhcC--CCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF-V--NPKDHDKPIQQVLVDLTD--GGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~v-i--~~~~~~~~~~~~~~~~~~--gg~d 258 (371)
.++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++++.... + |..+ .....+.+.+... +.+|
T Consensus 5 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~id 82 (253)
T 1hxh_A 5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSS-EADWTLVMAAVQRRLGTLN 82 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTC-HHHHHHHHHHHHHHHCSCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence 4689999988 9999999998888999 899999988765543 44443322 2 2222 1222222222211 3689
Q ss_pred EEEEccCCH----------H---------------HHHHHHHHhccCCceEEEEccC
Q 017431 259 YSFECIGNV----------S---------------VMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 259 vvid~~g~~----------~---------------~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
++++++|.. + ..+.++..|....|++|.+++.
T Consensus 83 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~ 139 (253)
T 1hxh_A 83 VLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASV 139 (253)
T ss_dssp EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCG
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcch
Confidence 999988741 1 2344555554422899998764
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0066 Score=52.97 Aligned_cols=78 Identities=23% Similarity=0.315 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh--HHHHHhcCCcEE-e--cCCCCCchHHHHHHhhcC--CCc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK--FDRAKNFGVTEF-V--NPKDHDKPIQQVLVDLTD--GGV 257 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~--~~~~~~~g~~~v-i--~~~~~~~~~~~~~~~~~~--gg~ 257 (371)
.++++||+|+ |++|.+.++.+...|+ +|++++++++. .+.+++.+.... + |..+ .....+.+.+... +++
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~i 80 (255)
T 2q2v_A 3 KGKTALVTGSTSGIGLGIAQVLARAGA-NIVLNGFGDPAPALAEIARHGVKAVHHPADLSD-VAQIEALFALAEREFGGV 80 (255)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTSCCEEEECCCTTS-HHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHhcCCceEEEeCCCCC-HHHHHHHHHHHHHHcCCC
Confidence 4689999988 9999999998888999 89998887652 122233343322 2 2222 1222222322211 379
Q ss_pred cEEEEccC
Q 017431 258 DYSFECIG 265 (371)
Q Consensus 258 dvvid~~g 265 (371)
|+++++.|
T Consensus 81 d~lv~~Ag 88 (255)
T 2q2v_A 81 DILVNNAG 88 (255)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 99999887
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.007 Score=53.44 Aligned_cols=79 Identities=20% Similarity=0.269 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcE---EecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE---FVNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~---vi~~~~~~~~~~~~~~~~~~--g 255 (371)
.++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+ ++.+... ..|..+ .......+.+... +
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 104 (270)
T 3ftp_A 27 DKQVAIVTGASRGIGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVND-ATAVDALVESTLKEFG 104 (270)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCC-HHHHHHHHHHHHHHcC
Confidence 5689999988 9999999988888999 899999988765433 2233321 233333 1222222322221 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|++++++|.
T Consensus 105 ~iD~lvnnAg~ 115 (270)
T 3ftp_A 105 ALNVLVNNAGI 115 (270)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999873
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0058 Score=53.80 Aligned_cols=79 Identities=18% Similarity=0.304 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~~--g 255 (371)
.++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++.+.... .|..+ .......+.+... +
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 80 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAGGTALAQVLDVTD-RHSVAAFAQAAVDTWG 80 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 4689999988 9999999998889999 899999988765533 22344322 23333 1222222222221 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|++++++|.
T Consensus 81 ~iD~lVnnAG~ 91 (264)
T 3tfo_A 81 RIDVLVNNAGV 91 (264)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999874
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0047 Score=53.76 Aligned_cols=79 Identities=30% Similarity=0.406 Sum_probs=52.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCcE---EecCCCCCchHHHHHHhhcC--CCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTE---FVNPKDHDKPIQQVLVDLTD--GGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~---vi~~~~~~~~~~~~~~~~~~--gg~d 258 (371)
+|+++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+. +++... ..|..+ ..+..+.+.+... +++|
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD 85 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERGA-KVIGTATSESGAQAISDYLGDNGKGMALNVTN-PESIEAVLKAITDEFGGVD 85 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTC-HHHHHHHHHHHHHHHCCCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceEEEEeCCC-HHHHHHHHHHHHHHcCCCC
Confidence 5789999987 9999999999989999 8999999887765443 333221 233333 1222222332221 3799
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
+++++.|.
T Consensus 86 ~lv~nAg~ 93 (248)
T 3op4_A 86 ILVNNAGI 93 (248)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999884
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.007 Score=53.24 Aligned_cols=79 Identities=23% Similarity=0.354 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h----cCCcEE---ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N----FGVTEF---VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~----~g~~~v---i~~~~~~~~~~~~~~~~~~-- 254 (371)
.|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+. + .+.... .|..+ .....+.+.+...
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 96 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAE-PDAPAELARRAAEAF 96 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTS-TTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHc
Confidence 4789999988 9999999999989999 8999999887654332 2 343221 23333 1233333333222
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|+++++.|.
T Consensus 97 g~id~lv~nAg~ 108 (266)
T 4egf_A 97 GGLDVLVNNAGI 108 (266)
T ss_dssp TSCSEEEEECCC
T ss_pred CCCCEEEECCCc
Confidence 379999998874
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=96.86 E-value=0.007 Score=51.42 Aligned_cols=97 Identities=8% Similarity=0.067 Sum_probs=62.0
Q ss_pred CEEEEEcC-ChHHHHHHHHHH-HcCCCeEEEEcCChh-hHHHHHhcCCc-EEe--cCCCCCchHHHHHHhhcCCCccEEE
Q 017431 188 SIVAVFGL-GTVGLAVAEGAK-AAGASRVIGIDIDPK-KFDRAKNFGVT-EFV--NPKDHDKPIQQVLVDLTDGGVDYSF 261 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~-~~g~~~v~~v~~~~~-~~~~~~~~g~~-~vi--~~~~~~~~~~~~~~~~~~gg~dvvi 261 (371)
++|||+|+ |.+|.+.++.+. ..|+ +|++++++++ +.+.+.+.+.. .++ |..+ . +.+.+... ++|+++
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d--~---~~~~~~~~-~~d~vv 78 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKTRIPPEIIDHERVTVIEGSFQN--P---GXLEQAVT-NAEVVF 78 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHHHSCHHHHTSTTEEEEECCTTC--H---HHHHHHHT-TCSEEE
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccccchhhccCCCceEEEECCCCC--H---HHHHHHHc-CCCEEE
Confidence 57999998 999999888877 8999 8999999887 65544322222 222 2222 2 22333222 689999
Q ss_pred EccCCHHH-HHHHHHHhccC-CceEEEEccCC
Q 017431 262 ECIGNVSV-MRAALECCHKG-WGTSVIVGVAA 291 (371)
Q Consensus 262 d~~g~~~~-~~~~~~~l~~~-~G~iv~~g~~~ 291 (371)
+++|.... .+.+++.+... .+++|.+++..
T Consensus 79 ~~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~~ 110 (221)
T 3r6d_A 79 VGAMESGSDMASIVKALSRXNIRRVIGVSMAG 110 (221)
T ss_dssp ESCCCCHHHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred EcCCCCChhHHHHHHHHHhcCCCeEEEEeece
Confidence 99986321 45555555432 26899887643
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0072 Score=53.58 Aligned_cols=79 Identities=30% Similarity=0.419 Sum_probs=52.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcE-E--ecCCCCCchHHHHHHhhcC--CCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE-F--VNPKDHDKPIQQVLVDLTD--GGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~-v--i~~~~~~~~~~~~~~~~~~--gg~d 258 (371)
+|+++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++++... . .|..+ .....+.+.+... +++|
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD 105 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKIGCGAAACRVDVSD-EQQIIAMVDACVAAFGGVD 105 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCSSCEEEECCTTC-HHHHHHHHHHHHHHHSSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCcceEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence 5789999987 8999999988888899 899999988766543 4554322 2 23333 1222222222221 3799
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
+++++.|.
T Consensus 106 ~lvnnAg~ 113 (277)
T 3gvc_A 106 KLVANAGV 113 (277)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99998884
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0081 Score=52.76 Aligned_cols=103 Identities=22% Similarity=0.338 Sum_probs=65.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcE-E--ecCCCCCchHHHHHHhhcC--CCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE-F--VNPKDHDKPIQQVLVDLTD--GGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~-v--i~~~~~~~~~~~~~~~~~~--gg~d 258 (371)
+++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++++... . .|..+ ..+..+.+.+... +.+|
T Consensus 5 ~~k~vlITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~iD 82 (263)
T 2a4k_A 5 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSD-PKAVEAVFAEALEEFGRLH 82 (263)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTS-HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCC-HHHHHHHHHHHHHHcCCCc
Confidence 4689999988 9999999998888999 899999988776544 4444222 1 23332 1222222322211 3699
Q ss_pred EEEEccCCH----------H---------------HHHHHHHHhccCCceEEEEccCC
Q 017431 259 YSFECIGNV----------S---------------VMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 259 vvid~~g~~----------~---------------~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
+++++.|.. + +.+.++..+..+ |++|.+++..
T Consensus 83 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~~ 139 (263)
T 2a4k_A 83 GVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG-GSLVLTGSVA 139 (263)
T ss_dssp EEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT-CEEEEECCCT
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CEEEEEecch
Confidence 999988731 0 133444445344 8999997753
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0066 Score=53.52 Aligned_cols=103 Identities=23% Similarity=0.286 Sum_probs=65.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHH----HHHhcCCcEE---ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFD----RAKNFGVTEF---VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~-~~~~~~----~~~~~g~~~v---i~~~~~~~~~~~~~~~~~~-- 254 (371)
.|+++||+|+ +++|.+.++.+...|+ +|+++++ ++++.+ .+++.+.... .|..+ .....+.+.+...
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 94 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQ-VPEIVKLFDQAVAHF 94 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 5789999988 8999999999889999 7777654 444332 2234454332 23222 1222223332221
Q ss_pred CCccEEEEccCCH-------------------------HHHHHHHHHhccCCceEEEEccCC
Q 017431 255 GGVDYSFECIGNV-------------------------SVMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 255 gg~dvvid~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
+++|+++++.|.. .+.+.++..|.++ |++|.+++..
T Consensus 95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~isS~~ 155 (270)
T 3is3_A 95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEG-GRIVLTSSNT 155 (270)
T ss_dssp SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT-CEEEEECCTT
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CeEEEEeCch
Confidence 3799999988841 1345667777785 9999997743
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0057 Score=53.75 Aligned_cols=80 Identities=15% Similarity=0.246 Sum_probs=52.3
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcEE---ecCCCCCchHHHHHHhhc--C
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF---VNPKDHDKPIQQVLVDLT--D 254 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~v---i~~~~~~~~~~~~~~~~~--~ 254 (371)
-+++++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+. +.+.... .|..+ .....+.+.+.. .
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTGRRALSVGTDITD-DAQVAHLVDETMKAY 86 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHT
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 46789999988 8999999988888999 8999999887654332 2343322 23333 122222222221 2
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|+++++.|.
T Consensus 87 g~id~lv~nAg~ 98 (264)
T 3ucx_A 87 GRVDVVINNAFR 98 (264)
T ss_dssp SCCSEEEECCCS
T ss_pred CCCcEEEECCCC
Confidence 379999998854
|
| >3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0026 Score=51.92 Aligned_cols=103 Identities=19% Similarity=0.227 Sum_probs=69.9
Q ss_pred hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCc-EEecCCCCCchHHHHHHhhcC
Q 017431 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT-EFVNPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~-~vi~~~~~~~~~~~~~~~~~~ 254 (371)
....+.++++||-+|+|. |..+..+++..+..+|++++.+++..+.+++ .+.. .++...+... .+.. ..
T Consensus 19 ~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~----~~~~-~~ 92 (178)
T 3hm2_A 19 SALAPKPHETLWDIGGGS-GSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPR----AFDD-VP 92 (178)
T ss_dssp HHHCCCTTEEEEEESTTT-THHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTG----GGGG-CC
T ss_pred HHhcccCCCeEEEeCCCC-CHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHh----hhhc-cC
Confidence 445678899999999985 8888899988744499999999988777664 4543 2221122101 1111 11
Q ss_pred CCccEEEEccCC--HHHHHHHHHHhccCCceEEEEcc
Q 017431 255 GGVDYSFECIGN--VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 255 gg~dvvid~~g~--~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
+.||+|+....- ...++.+.+.|+++ |+++....
T Consensus 93 ~~~D~i~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~ 128 (178)
T 3hm2_A 93 DNPDVIFIGGGLTAPGVFAAAWKRLPVG-GRLVANAV 128 (178)
T ss_dssp SCCSEEEECC-TTCTTHHHHHHHTCCTT-CEEEEEEC
T ss_pred CCCCEEEECCcccHHHHHHHHHHhcCCC-CEEEEEee
Confidence 479999965533 34789999999997 99987644
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0035 Score=55.76 Aligned_cols=73 Identities=22% Similarity=0.204 Sum_probs=51.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCC-----cE-EecCCCCCchHHHHHHhhcCCCc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGV-----TE-FVNPKDHDKPIQQVLVDLTDGGV 257 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~g~-----~~-vi~~~~~~~~~~~~~~~~~~gg~ 257 (371)
-.++++||+|+|++|.+++..+...|+++|+++.++.++.+ ++++++. .. .++. .++.+.+. .+
T Consensus 125 l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~----~~l~~~l~-----~~ 195 (283)
T 3jyo_A 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDA----RGIEDVIA-----AA 195 (283)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECS----TTHHHHHH-----HS
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCH----HHHHHHHh-----cC
Confidence 46889999999999999999999999978999999988765 3344331 11 2221 22333332 48
Q ss_pred cEEEEccCC
Q 017431 258 DYSFECIGN 266 (371)
Q Consensus 258 dvvid~~g~ 266 (371)
|+|++|++.
T Consensus 196 DiVInaTp~ 204 (283)
T 3jyo_A 196 DGVVNATPM 204 (283)
T ss_dssp SEEEECSST
T ss_pred CEEEECCCC
Confidence 999999874
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0083 Score=53.22 Aligned_cols=101 Identities=22% Similarity=0.318 Sum_probs=62.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC------------hhhHHH----HHhcCCcEE---ecCCCCCchH
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID------------PKKFDR----AKNFGVTEF---VNPKDHDKPI 245 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~------------~~~~~~----~~~~g~~~v---i~~~~~~~~~ 245 (371)
.|+++||+|+ +++|.+.++.+...|+ +|++++++ .++.+. +++.+.... .|..+ ....
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v 86 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRD-RAAV 86 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTC-HHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCC-HHHH
Confidence 5789999988 9999999999889999 89988876 333222 233443322 23332 1222
Q ss_pred HHHHHhhcC--CCccEEEEccCCH--------H---------------HHHHHHHHhccCCceEEEEcc
Q 017431 246 QQVLVDLTD--GGVDYSFECIGNV--------S---------------VMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 246 ~~~~~~~~~--gg~dvvid~~g~~--------~---------------~~~~~~~~l~~~~G~iv~~g~ 289 (371)
.+.+.+... +++|++++++|.. + +.+.++..|..+ |++|.+++
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS 154 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSG-ASIITTGS 154 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTT-CEEEEECC
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcC-cEEEEecc
Confidence 222322221 3799999988741 1 234445556665 99998876
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=96.82 E-value=0.01 Score=51.26 Aligned_cols=77 Identities=22% Similarity=0.247 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEEe--cCCCCCchHHHHHHhhcCCCccEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFV--NPKDHDKPIQQVLVDLTDGGVDYSF 261 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~vi--~~~~~~~~~~~~~~~~~~gg~dvvi 261 (371)
++++|||+|+ |.+|.+.++.+...|+ +|+++++++++.+.+ +++....++ |..+ .+-.+.+.+ ..+++|+++
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~-~~~~id~vi 81 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLGD--WEATERALG-SVGPVDLLV 81 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTC--HHHHHHHHT-TCCCCCEEE
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCCCEEEEeCCC--HHHHHHHHH-HcCCCCEEE
Confidence 5789999988 9999999999999999 899998888766543 334222333 2222 222222222 113799999
Q ss_pred EccCC
Q 017431 262 ECIGN 266 (371)
Q Consensus 262 d~~g~ 266 (371)
+++|.
T Consensus 82 ~~Ag~ 86 (244)
T 3d3w_A 82 NNAAV 86 (244)
T ss_dssp ECCCC
T ss_pred ECCcc
Confidence 98873
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.023 Score=48.59 Aligned_cols=100 Identities=13% Similarity=0.092 Sum_probs=63.7
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCcE---EecCCCCCchHHHHHHhhcCCCccEEEE
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTE---FVNPKDHDKPIQQVLVDLTDGGVDYSFE 262 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~---vi~~~~~~~~~~~~~~~~~~gg~dvvid 262 (371)
+++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+. +++... ..|..+ .+-.+.+.+.....+|++++
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~d~lv~ 78 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGK-ATYLTGRSESKLSTVTNCLSNNVGYRARDLAS--HQEVEQLFEQLDSIPSTVVH 78 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTCSSCCCEEECCTTC--HHHHHHHHHSCSSCCSEEEE
T ss_pred CEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhccCeEeecCCC--HHHHHHHHHHHhhcCCEEEE
Confidence 46899988 9999999999989999 7999999988766554 443321 223333 33333333333334599999
Q ss_pred ccCCH-------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 263 CIGNV-------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 263 ~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+.|.. .+.+.++..+....+++|.+++.
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~ 131 (230)
T 3guy_A 79 SAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMST 131 (230)
T ss_dssp CCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCG
T ss_pred eCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeec
Confidence 88731 12344555565533688888764
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=96.81 E-value=0.019 Score=44.54 Aligned_cols=76 Identities=21% Similarity=0.314 Sum_probs=53.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCcEEe-cCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFV-NPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~vi-~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
+.+|+|+|+|.+|...++.+...|. +|+++++++++.+.++ +++...+. +..+ . +.+.+..-.++|+++.++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~--~---~~l~~~~~~~~d~vi~~~ 77 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDALVINGDCTK--I---KTLEDAGIEDADMYIAVT 77 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSEEEESCTTS--H---HHHHHTTTTTCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhcCcEEEEcCCCC--H---HHHHHcCcccCCEEEEee
Confidence 3579999999999999999888898 8999999888777665 45653322 2211 1 223322123799999999
Q ss_pred CCHH
Q 017431 265 GNVS 268 (371)
Q Consensus 265 g~~~ 268 (371)
+...
T Consensus 78 ~~~~ 81 (140)
T 1lss_A 78 GKEE 81 (140)
T ss_dssp SCHH
T ss_pred CCch
Confidence 9854
|
| >2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A* | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0085 Score=54.09 Aligned_cols=100 Identities=15% Similarity=0.250 Sum_probs=71.1
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc----CCcE--EecCCCCCchHHHHHHh
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTE--FVNPKDHDKPIQQVLVD 251 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~----g~~~--vi~~~~~~~~~~~~~~~ 251 (371)
+....++.++++||-+|+|. |..+..+++..|+ +|++++.+++..+.+++. |... .+...+ + .+
T Consensus 82 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d----~----~~ 151 (318)
T 2fk8_A 82 NLDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQG----W----ED 151 (318)
T ss_dssp HHTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESC----G----GG
T ss_pred HHHhcCCCCcCEEEEEcccc-hHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECC----h----HH
Confidence 44566788999999999975 8888899988888 999999999888777653 3321 111111 1 11
Q ss_pred hcCCCccEEEEc-----cCC---HHHHHHHHHHhccCCceEEEEcc
Q 017431 252 LTDGGVDYSFEC-----IGN---VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 252 ~~~gg~dvvid~-----~g~---~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
. ++.||+|+.. .+. ...++.+.+.|+++ |+++....
T Consensus 152 ~-~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~ 195 (318)
T 2fk8_A 152 F-AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPAD-GRMTVQSS 195 (318)
T ss_dssp C-CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTT-CEEEEEEE
T ss_pred C-CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCC-cEEEEEEe
Confidence 2 2579999975 332 45688889999997 99887654
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0083 Score=52.49 Aligned_cols=79 Identities=18% Similarity=0.331 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh-HHHH-Hhc----CCcEE-e--cCCCCCchHHHHHHhhcC-
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-FDRA-KNF----GVTEF-V--NPKDHDKPIQQVLVDLTD- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~-~~~~-~~~----g~~~v-i--~~~~~~~~~~~~~~~~~~- 254 (371)
+++++||+|+ |++|.+.++.+...|+ +|+++++++++ .+.+ +++ +.... + |..+ .....+.+.+...
T Consensus 3 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~ 80 (260)
T 1x1t_A 3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSK-GEAVRGLVDNAVRQ 80 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTS-HHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCC-HHHHHHHHHHHHHh
Confidence 4689999988 9999999998888999 89999887765 4322 222 43322 2 2222 1222222322221
Q ss_pred -CCccEEEEccCC
Q 017431 255 -GGVDYSFECIGN 266 (371)
Q Consensus 255 -gg~dvvid~~g~ 266 (371)
+++|+++++.|.
T Consensus 81 ~g~iD~lv~~Ag~ 93 (260)
T 1x1t_A 81 MGRIDILVNNAGI 93 (260)
T ss_dssp HSCCSEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 379999998873
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0091 Score=53.37 Aligned_cols=103 Identities=21% Similarity=0.260 Sum_probs=65.4
Q ss_pred CCCCEEEEEcC-Ch--HHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEEe--cCCCCCchHHHHHHhhc--
Q 017431 185 EPGSIVAVFGL-GT--VGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFV--NPKDHDKPIQQVLVDLT-- 253 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~--vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~vi--~~~~~~~~~~~~~~~~~-- 253 (371)
-+|+++||+|+ |. +|.+.++.+...|+ +|++++++++..+.+ .+.+....+ |..+ .....+.+.+..
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~ 106 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELGAFVAGHCDVAD-AASIDAVFETLEKK 106 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCC-HHHHHHHHHHHHHh
Confidence 35789999987 66 99999988888999 899998886543333 233432222 3332 122222222221
Q ss_pred CCCccEEEEccCCH-----------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 254 DGGVDYSFECIGNV-----------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 254 ~gg~dvvid~~g~~-----------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
-+++|++++++|.. .+.+.++..|.++ |+||.+++.
T Consensus 107 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~Iv~isS~ 171 (293)
T 3grk_A 107 WGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADG-GSILTLTYY 171 (293)
T ss_dssp TSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTC-EEEEEEECG
T ss_pred cCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CEEEEEeeh
Confidence 23799999988741 1345556667775 999999764
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.011 Score=52.85 Aligned_cols=103 Identities=18% Similarity=0.199 Sum_probs=64.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--hHH----HHHhcCCcEEecCCCC-Cch-HHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--KFD----RAKNFGVTEFVNPKDH-DKP-IQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~--~~~----~~~~~g~~~vi~~~~~-~~~-~~~~~~~~~~-- 254 (371)
+|+++||+|+ +++|.+.+..+...|+ +|++++++.+ +.+ .+++.+....+...+. +.+ ..+.+.+...
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 126 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL 126 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 5789999988 9999999998889999 8888877632 222 2334554433322221 122 2222222211
Q ss_pred CCccEEEEccCCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 255 GGVDYSFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 255 gg~dvvid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+++|+++++.|.. .+.+.++..+.++ |+||.+++.
T Consensus 127 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-g~Iv~isS~ 187 (294)
T 3r3s_A 127 GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKG-ASIITTSSI 187 (294)
T ss_dssp TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTT-CEEEEECCG
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC-CEEEEECCh
Confidence 3799999988741 1234455566675 999999764
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.77 E-value=0.014 Score=51.60 Aligned_cols=78 Identities=22% Similarity=0.171 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh---cCCcEE---ecCCCCCchHHHHHHhhc--CCC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN---FGVTEF---VNPKDHDKPIQQVLVDLT--DGG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~---~g~~~v---i~~~~~~~~~~~~~~~~~--~gg 256 (371)
.|+++||+|+ |++|.+.++.+...|+ +|+++++.++..+.+++ .+.... .|..+ .+-.+.+.+.. .++
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~g~ 106 (273)
T 3uf0_A 30 AGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGRTDGVKEVADEIADGGGSAEAVVADLAD--LEGAANVAEELAATRR 106 (273)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTC--HHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHhcCC
Confidence 5789999988 9999999998889999 88888876554444443 333221 23322 22222222211 147
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|++++++|.
T Consensus 107 iD~lv~nAg~ 116 (273)
T 3uf0_A 107 VDVLVNNAGI 116 (273)
T ss_dssp CCEEEECCCC
T ss_pred CcEEEECCCC
Confidence 9999998874
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0054 Score=54.30 Aligned_cols=79 Identities=22% Similarity=0.332 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCC-cE--E--ecCCCCCchHHHHHHhhcC-
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGV-TE--F--VNPKDHDKPIQQVLVDLTD- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~-~~--v--i~~~~~~~~~~~~~~~~~~- 254 (371)
+++++||+|+ |.+|.+.++.+...|+ +|++++++.++.+.+ ++.+. .. . .|..+ ...+.+.+.+...
T Consensus 31 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~ 108 (279)
T 1xg5_A 31 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN-EEDILSMFSAIRSQ 108 (279)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCC-HHHHHHHHHHHHHh
Confidence 4689999988 9999999998888999 899998887765433 22332 11 1 23332 1222222322221
Q ss_pred -CCccEEEEccCC
Q 017431 255 -GGVDYSFECIGN 266 (371)
Q Consensus 255 -gg~dvvid~~g~ 266 (371)
+++|++|+++|.
T Consensus 109 ~g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 109 HSGVDICINNAGL 121 (279)
T ss_dssp HCCCSEEEECCCC
T ss_pred CCCCCEEEECCCC
Confidence 379999998873
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0057 Score=54.82 Aligned_cols=102 Identities=18% Similarity=0.189 Sum_probs=64.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCC---cE-E--ecCCCCCchHHHHHHhhcC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGV---TE-F--VNPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~---~~-v--i~~~~~~~~~~~~~~~~~~ 254 (371)
.++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +.+. .. . .|..+ .....+.+.+...
T Consensus 25 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~ 102 (297)
T 1xhl_A 25 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE-ASGQDDIINTTLA 102 (297)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCC-HHHHHHHHHHHHH
Confidence 4689999988 9999999998888999 8999999887654332 2232 21 2 23332 1222222222211
Q ss_pred --CCccEEEEccCC----H-----------------------HHHHHHHHHhc-cCCceEEEEccC
Q 017431 255 --GGVDYSFECIGN----V-----------------------SVMRAALECCH-KGWGTSVIVGVA 290 (371)
Q Consensus 255 --gg~dvvid~~g~----~-----------------------~~~~~~~~~l~-~~~G~iv~~g~~ 290 (371)
+++|++++++|. + .+.+.++..+. .+ |+||.+++.
T Consensus 103 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~ 167 (297)
T 1xhl_A 103 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSI 167 (297)
T ss_dssp HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCG
T ss_pred hcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCc
Confidence 379999998873 1 12345555554 54 899999764
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.014 Score=51.53 Aligned_cols=102 Identities=22% Similarity=0.364 Sum_probs=62.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC------------hhhHHH----HHhcCCcEE---ecCCCCCchH
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID------------PKKFDR----AKNFGVTEF---VNPKDHDKPI 245 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~------------~~~~~~----~~~~g~~~v---i~~~~~~~~~ 245 (371)
.|+++||+|+ +++|.+.++.+...|+ +|++++++ .++.+. +++.+.... .|..+ ....
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v 89 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRD-RESL 89 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTC-HHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCC-HHHH
Confidence 5789999988 9999999998889999 89988876 333322 233444332 23322 1222
Q ss_pred HHHHHhhcC--CCccEEEEccCCH---------------------HHHHHHHHHhc---cCCceEEEEccC
Q 017431 246 QQVLVDLTD--GGVDYSFECIGNV---------------------SVMRAALECCH---KGWGTSVIVGVA 290 (371)
Q Consensus 246 ~~~~~~~~~--gg~dvvid~~g~~---------------------~~~~~~~~~l~---~~~G~iv~~g~~ 290 (371)
.+.+.+... +++|++++++|.. .+.+.++..|. .+ |+||.+++.
T Consensus 90 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~-g~iv~isS~ 159 (278)
T 3sx2_A 90 SAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTG-GSIVLISSS 159 (278)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSC-EEEEEECCG
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC-cEEEEEccH
Confidence 222322221 3799999988841 12344444453 24 899998764
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0073 Score=52.36 Aligned_cols=79 Identities=22% Similarity=0.279 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcC---CcEE--ecCCCCCchHHHHHHhhcC--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFG---VTEF--VNPKDHDKPIQQVLVDLTD--GG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g---~~~v--i~~~~~~~~~~~~~~~~~~--gg 256 (371)
+++++||+|+ |.+|.+.++.+...|+ +|+++++++++.+.+ +++. .... .|..+ ...+.+.+.+... +.
T Consensus 5 ~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 82 (251)
T 1zk4_A 5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSD-EDGWTKLFDATEKAFGP 82 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC-HHHHHHHHHHHHHHHSS
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhccCceEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence 4689999988 9999999998888999 899998887765433 3332 1122 23322 1222222322211 36
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|++++++|.
T Consensus 83 id~li~~Ag~ 92 (251)
T 1zk4_A 83 VSTLVNNAGI 92 (251)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999998873
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.01 Score=52.59 Aligned_cols=79 Identities=24% Similarity=0.386 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCC---cE-E--ecCCCCCchHHHHHHhhcC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGV---TE-F--VNPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~---~~-v--i~~~~~~~~~~~~~~~~~~ 254 (371)
.++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++.+. .. . .|..+ .....+.+.+...
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~ 87 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITN-EDETARAVDAVTA 87 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCC-HHHHHHHHHHHHH
Confidence 4789999988 9999999998888999 899999988765432 33333 11 1 23332 1222223332221
Q ss_pred --CCccEEEEccCC
Q 017431 255 --GGVDYSFECIGN 266 (371)
Q Consensus 255 --gg~dvvid~~g~ 266 (371)
+++|++++++|.
T Consensus 88 ~~g~id~lv~nAg~ 101 (281)
T 3svt_A 88 WHGRLHGVVHCAGG 101 (281)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCc
Confidence 379999998884
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0093 Score=52.26 Aligned_cols=79 Identities=22% Similarity=0.414 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-H---hcCCcEE---ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-K---NFGVTEF---VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~---~~g~~~v---i~~~~~~~~~~~~~~~~~~--g 255 (371)
+++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ + +.+.... .|..+ .......+.+... +
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 83 (262)
T 1zem_A 6 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTS-EEAVIGTVDSVVRDFG 83 (262)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHhC
Confidence 4689999988 9999999999999999 899998887765433 2 2343221 23332 1222222222221 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|+++++.|.
T Consensus 84 ~id~lv~nAg~ 94 (262)
T 1zem_A 84 KIDFLFNNAGY 94 (262)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999998873
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0049 Score=54.80 Aligned_cols=79 Identities=22% Similarity=0.295 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc----CCc-EE--ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF----GVT-EF--VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~----g~~-~v--i~~~~~~~~~~~~~~~~~~-- 254 (371)
+|+++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ++ +.. .. .|..+ ..+..+.+.+...
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 109 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGD-PDQVAALFAAVRAEF 109 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 5789999988 9999999998888999 8999999887654332 22 211 22 23333 1222222322221
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|++++++|.
T Consensus 110 g~iD~lvnnAG~ 121 (281)
T 4dry_A 110 ARLDLLVNNAGS 121 (281)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 379999998874
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.016 Score=49.14 Aligned_cols=92 Identities=20% Similarity=0.207 Sum_probs=62.6
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE-ecCCCCCchHHHHHHhhcCCCccEEEEccCC
Q 017431 189 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 266 (371)
Q Consensus 189 ~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~gg~dvvid~~g~ 266 (371)
+|||+|+ |.+|...+..+...|+ +|+++++++++.+.+...+...+ .|..+ .+. +.+ +++|++|++++.
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~D~~d--~~~-~~~-----~~~d~vi~~ag~ 72 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQKAADRLGATVATLVKEPLV--LTE-ADL-----DSVDAVVDALSV 72 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHTCTTSEEEECCGGG--CCH-HHH-----TTCSEEEECCCC
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEecccccccccCCCceEEeccccc--ccH-hhc-----ccCCEEEECCcc
Confidence 5899988 9999999999999999 99999999887765544444332 23322 111 111 369999999976
Q ss_pred H----------HHHHHHHHHhccCCceEEEEcc
Q 017431 267 V----------SVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 267 ~----------~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
. .....+++.+...++++|.+++
T Consensus 73 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS 105 (224)
T 3h2s_A 73 PWGSGRGYLHLDFATHLVSLLRNSDTLAVFILG 105 (224)
T ss_dssp CTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred CCCcchhhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence 2 2245556666543378888864
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=96.72 E-value=0.011 Score=52.00 Aligned_cols=78 Identities=22% Similarity=0.360 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHH-HHhcCC--c-EE--ecCCCCCchHHHHHHhhcC--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR-AKNFGV--T-EF--VNPKDHDKPIQQVLVDLTD--GG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~-~~~~g~--~-~v--i~~~~~~~~~~~~~~~~~~--gg 256 (371)
.+++|||+|+ |.+|.+.++.+...|+ +|+++++++++.+. .++++. . .. .|..+ ...+.+.+.+... ++
T Consensus 15 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 92 (278)
T 2bgk_A 15 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTK-DEDVRNLVDTTIAKHGK 92 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC-HHHHHHHHHHHHHHHSC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCChhHHHHHHHHhCCCCceEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence 4689999988 9999999998888999 89999888766543 334432 1 12 23322 1222223322211 37
Q ss_pred ccEEEEccC
Q 017431 257 VDYSFECIG 265 (371)
Q Consensus 257 ~dvvid~~g 265 (371)
+|++++++|
T Consensus 93 id~li~~Ag 101 (278)
T 2bgk_A 93 LDIMFGNVG 101 (278)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCc
Confidence 999999887
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=96.71 E-value=0.012 Score=51.40 Aligned_cols=89 Identities=25% Similarity=0.346 Sum_probs=56.6
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh-------------------hhHHHH----HhcCCc-EEec-CCCC
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP-------------------KKFDRA----KNFGVT-EFVN-PKDH 241 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~-------------------~~~~~~----~~~g~~-~vi~-~~~~ 241 (371)
+.+|+|+|+|++|..+++.+...|.++++.++.+. .|.+.+ +++... .+.. ....
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 110 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL 110 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC
Confidence 47999999999999999999999998999999886 454433 233322 2211 1111
Q ss_pred CchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhcc
Q 017431 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 279 (371)
Q Consensus 242 ~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~ 279 (371)
+.. .+.+.. .++|+|++|+++.++...+.+....
T Consensus 111 ~~~---~~~~~~-~~~DvVi~~~d~~~~~~~l~~~~~~ 144 (249)
T 1jw9_B 111 DDA---ELAALI-AEHDLVLDCTDNVAVRNQLNAGCFA 144 (249)
T ss_dssp CHH---HHHHHH-HTSSEEEECCSSHHHHHHHHHHHHH
T ss_pred CHh---HHHHHH-hCCCEEEEeCCCHHHHHHHHHHHHH
Confidence 111 122211 1699999999987654444444444
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.70 E-value=0.006 Score=52.94 Aligned_cols=79 Identities=20% Similarity=0.293 Sum_probs=52.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEE-ecCCCCCchHHHHHHhhcC--CCccEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF-VNPKDHDKPIQQVLVDLTD--GGVDYS 260 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~v-i~~~~~~~~~~~~~~~~~~--gg~dvv 260 (371)
+++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++++...+ .|..+ .....+.+.+... +++|++
T Consensus 4 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id~l 81 (245)
T 1uls_A 4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVMDVAD-PASVERGFAEALAHLGRLDGV 81 (245)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEEECCTTC-HHHHHHHHHHHHHHHSSCCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCEEEEecCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 4689999988 9999999998888999 899998988766543 44553222 23333 1222233332221 369999
Q ss_pred EEccCC
Q 017431 261 FECIGN 266 (371)
Q Consensus 261 id~~g~ 266 (371)
+++.|.
T Consensus 82 vn~Ag~ 87 (245)
T 1uls_A 82 VHYAGI 87 (245)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999883
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.011 Score=51.84 Aligned_cols=79 Identities=22% Similarity=0.249 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~~--g 255 (371)
++++|||+|+ |++|.+.+..+...|+ +|++++++.++.+.+ .+.+.... .|..+ .......+.+... +
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g 105 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAGGEAESHACDLSH-SDAIAAFATGVLAAHG 105 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCC-HHHHHHHHHHHHHhcC
Confidence 5789999988 9999999988888899 899999988765433 22343222 23322 1222222222211 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
.+|++++++|.
T Consensus 106 ~id~lv~~Ag~ 116 (262)
T 3rkr_A 106 RCDVLVNNAGV 116 (262)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 79999998875
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.70 E-value=0.016 Score=51.36 Aligned_cols=34 Identities=24% Similarity=0.168 Sum_probs=30.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID 220 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~ 220 (371)
.++++||+|+ |++|.+.++.+...|+ +|++++++
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~ 43 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEAGA-DIAICDRC 43 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCC
Confidence 5789999988 9999999999999999 89998886
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0096 Score=53.27 Aligned_cols=102 Identities=18% Similarity=0.290 Sum_probs=64.7
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEEe--cCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFV--NPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g--~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~vi--~~~~~~~~~~~~~~~~~~-- 254 (371)
.++++||+|+ | ++|.+.++.+...|+ +|++++++++..+.+ ++.+....+ |..+ .....+.+.+...
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 106 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLGVKLTVPCDVSD-AESVDNMFKVLAEEW 106 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 5789999988 5 899998888888899 899998887544433 334433332 3333 1222222322221
Q ss_pred CCccEEEEccCCH-----------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 255 GGVDYSFECIGNV-----------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 255 gg~dvvid~~g~~-----------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+++|++++++|.. .+.+.++..|.++ |+||.+++.
T Consensus 107 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-g~IV~isS~ 170 (296)
T 3k31_A 107 GSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNG-GSILTLSYY 170 (296)
T ss_dssp SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTC-EEEEEEECG
T ss_pred CCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CEEEEEEeh
Confidence 3799999988741 0233444456665 999998764
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=96.69 E-value=0.016 Score=50.40 Aligned_cols=104 Identities=17% Similarity=0.184 Sum_probs=62.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHhc--CCcE-E--ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNF--GVTE-F--VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~--~~~~~~~~--g~~~-v--i~~~~~~~~~~~~~~~~~~--g 255 (371)
+++++||+|+ |++|.+.++.+...|+++|++++++++ ..+.+.+. +... . .|..+......+.+.+... +
T Consensus 4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g 83 (254)
T 1sby_A 4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK 83 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence 4689999987 999999999988899944888877753 33333332 2211 1 2333210223333332221 3
Q ss_pred CccEEEEccCCH-----------------HHHHHHHHHhcc-----CCceEEEEccC
Q 017431 256 GVDYSFECIGNV-----------------SVMRAALECCHK-----GWGTSVIVGVA 290 (371)
Q Consensus 256 g~dvvid~~g~~-----------------~~~~~~~~~l~~-----~~G~iv~~g~~ 290 (371)
++|++++++|.. .+.+.++..+.. + |++|.+++.
T Consensus 84 ~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~-g~iv~isS~ 139 (254)
T 1sby_A 84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPG-GIIANICSV 139 (254)
T ss_dssp CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCC-EEEEEECCG
T ss_pred CCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCC-CEEEEECch
Confidence 799999998731 123445555533 3 889988764
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=96.69 E-value=0.014 Score=51.28 Aligned_cols=79 Identities=20% Similarity=0.170 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h----cCCc-E-E--ecCCCCCchHHHHHHhhcC-
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N----FGVT-E-F--VNPKDHDKPIQQVLVDLTD- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~----~g~~-~-v--i~~~~~~~~~~~~~~~~~~- 254 (371)
+++++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+. + .+.. . . .|..+ .......+.+...
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~ 84 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLD-ALQVRAFAEACERT 84 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCC-HHHHHHHHHHHHHH
Confidence 4789999988 9999999998888999 8999999887654332 2 3332 2 1 23333 1222222222211
Q ss_pred -CCccEEEEccCC
Q 017431 255 -GGVDYSFECIGN 266 (371)
Q Consensus 255 -gg~dvvid~~g~ 266 (371)
+++|+++++.|.
T Consensus 85 ~g~id~lvnnAg~ 97 (265)
T 3lf2_A 85 LGCASILVNNAGQ 97 (265)
T ss_dssp HCSCSEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 379999999884
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.69 E-value=0.013 Score=51.05 Aligned_cols=41 Identities=24% Similarity=0.323 Sum_probs=34.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 227 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~ 227 (371)
.+++|||+|+ |.+|.+.+..+...|+ +|+++++++++.+.+
T Consensus 6 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~ 47 (264)
T 2pd6_A 6 RSALALVTGAGSGIGRAVSVRLAGEGA-TVAACDLDRAAAQET 47 (264)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHH
Confidence 4689999988 9999999988888999 899999888765543
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.01 Score=52.39 Aligned_cols=79 Identities=23% Similarity=0.273 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcE-E--ecCCCCCchHHHHHHhhcC--CCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE-F--VNPKDHDKPIQQVLVDLTD--GGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~-v--i~~~~~~~~~~~~~~~~~~--gg~d 258 (371)
.++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++++... . .|..+ .....+.+.+... +++|
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD 104 (272)
T 4dyv_A 27 GKKIAIVTGAGSGVGRAVAVALAGAGY-GVALAGRRLDALQETAAEIGDDALCVPTDVTD-PDSVRALFTATVEKFGRVD 104 (272)
T ss_dssp -CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTSCCEEEECCTTS-HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence 5689999988 9999999998888999 899999988776543 4454322 2 23332 1222222322221 3799
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
++++++|.
T Consensus 105 ~lVnnAg~ 112 (272)
T 4dyv_A 105 VLFNNAGT 112 (272)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99998874
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=96.68 E-value=0.01 Score=51.85 Aligned_cols=79 Identities=18% Similarity=0.193 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v-~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~~-- 254 (371)
+++++||+|+ |++|.+.++.+...|+ +|+.+ .+++++.+.+ ++.+.... .|..+ .....+.+.+...
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~-~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 80 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGY-NIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQ-PAKIKEMFQQIDETF 80 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 5789999988 9999999999999999 77775 7777654433 23344322 23322 1222222222221
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|+++++.|.
T Consensus 81 g~id~lv~nAg~ 92 (258)
T 3oid_A 81 GRLDVFVNNAAS 92 (258)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 379999999873
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.012 Score=52.11 Aligned_cols=79 Identities=23% Similarity=0.194 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhcC-CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLTD-GG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~~-gg 256 (371)
.|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+ ++.+.... .|..+ .....+.+.+... ++
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~g~ 109 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSE-AGAGTDLIERAEAIAP 109 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTS-TTHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCC-HHHHHHHHHHHHHhCC
Confidence 5789999988 9999999998888999 899998887654433 22343322 23332 1222222222111 57
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|++++++|.
T Consensus 110 iD~lvnnAg~ 119 (275)
T 4imr_A 110 VDILVINASA 119 (275)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999998884
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0069 Score=53.16 Aligned_cols=102 Identities=11% Similarity=0.200 Sum_probs=61.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh---HH-HH---HhcCCcEE---ecCCCCCchHHHHHHhhcC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK---FD-RA---KNFGVTEF---VNPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~---~~-~~---~~~g~~~v---i~~~~~~~~~~~~~~~~~~ 254 (371)
.++++||+|+ +++|.+.++.+...|+ +|+.+++.... .+ +. ++.+.... .|..+ .....+.+.+...
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~ 87 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSN-EEEVAKLFDFAEK 87 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCS-HHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHH
Confidence 5789999988 9999999988888999 88887665432 22 12 22343222 23332 1222222222221
Q ss_pred --CCccEEEEccCC----------HH---------------HHHHHHHHhccCCceEEEEccC
Q 017431 255 --GGVDYSFECIGN----------VS---------------VMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 255 --gg~dvvid~~g~----------~~---------------~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+++|++++++|. .+ +.+.++..|+++ |++|.+++.
T Consensus 88 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~iv~isS~ 149 (262)
T 3ksu_A 88 EFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPN-GHIITIATS 149 (262)
T ss_dssp HHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEE-EEEEEECCC
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC-CEEEEEech
Confidence 379999999883 11 234444455565 999988763
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.68 E-value=0.017 Score=50.30 Aligned_cols=78 Identities=19% Similarity=0.169 Sum_probs=50.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-H---hcCCcE-E--ecCCCCCchHHHHHHhhc--CCC
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-K---NFGVTE-F--VNPKDHDKPIQQVLVDLT--DGG 256 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~---~~g~~~-v--i~~~~~~~~~~~~~~~~~--~gg 256 (371)
++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ + +.+... . .|..+ .....+.+.+.. -++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~ 79 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD-RDQVFAAVEQARKTLGG 79 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHhCC
Confidence 578999988 9999999999888999 899998887765433 2 234322 2 23332 122222232221 237
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|++++++|.
T Consensus 80 id~lv~nAg~ 89 (256)
T 1geg_A 80 FDVIVNNAGV 89 (256)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999998873
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0087 Score=52.62 Aligned_cols=77 Identities=19% Similarity=0.155 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh---c--CCcE-E--ecCCCCCchHHHHHHhhcCC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN---F--GVTE-F--VNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~---~--g~~~-v--i~~~~~~~~~~~~~~~~~~g 255 (371)
.++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++ . +... . .|..+ .+..+.+.+.. +
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~-g 84 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADLGT--EQGCQDVIEKY-P 84 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTS--HHHHHHHHHHC-C
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCC--HHHHHHHHHhc-C
Confidence 5789999988 9999999988888999 899999988765432 22 2 2211 1 22222 33233333322 4
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|+++++.|.
T Consensus 85 ~id~lv~nAg~ 95 (267)
T 3t4x_A 85 KVDILINNLGI 95 (267)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999884
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.66 E-value=0.011 Score=52.01 Aligned_cols=102 Identities=21% Similarity=0.259 Sum_probs=63.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc-----CCc-EE--ecCCCCCchHHHHHHhhcC-
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF-----GVT-EF--VNPKDHDKPIQQVLVDLTD- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~-----g~~-~v--i~~~~~~~~~~~~~~~~~~- 254 (371)
.++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ +++ +.. .. .|..+ .....+.+.+...
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~ 83 (267)
T 2gdz_A 6 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD-QQQLRDTFRKVVDH 83 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTS-HHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCC-HHHHHHHHHHHHHH
Confidence 4689999988 9999999999888999 899998887765432 222 111 11 23332 1223333322211
Q ss_pred -CCccEEEEccCCH------H-----------HHHHHHHHhcc-----CCceEEEEccC
Q 017431 255 -GGVDYSFECIGNV------S-----------VMRAALECCHK-----GWGTSVIVGVA 290 (371)
Q Consensus 255 -gg~dvvid~~g~~------~-----------~~~~~~~~l~~-----~~G~iv~~g~~ 290 (371)
+++|++++++|.. . ..+.+++.+.. . |++|.+++.
T Consensus 84 ~g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~-g~iv~isS~ 141 (267)
T 2gdz_A 84 FGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEG-GIIINMSSL 141 (267)
T ss_dssp HSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCC-EEEEEECCG
T ss_pred cCCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCC-CEEEEeCCc
Confidence 3699999998741 0 23445555543 4 899988764
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.012 Score=54.08 Aligned_cols=104 Identities=17% Similarity=0.255 Sum_probs=65.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh-----------HHHHHhcCCcEE---ecCCCCCchHHHHHH
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-----------FDRAKNFGVTEF---VNPKDHDKPIQQVLV 250 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~-----------~~~~~~~g~~~v---i~~~~~~~~~~~~~~ 250 (371)
.|+++||+|+ +++|.+.++.+...|+ +|+++++++++ .+.+++.+.... .|..+ .....+.+.
T Consensus 44 ~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d-~~~v~~~~~ 121 (346)
T 3kvo_A 44 AGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRD-EQQISAAVE 121 (346)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHH
T ss_pred CCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHH
Confidence 5789999988 9999999888888899 89888887753 223344554332 23333 122222333
Q ss_pred hhcC--CCccEEEEccCCH-------------------------HHHHHHHHHhcc-CCceEEEEccCC
Q 017431 251 DLTD--GGVDYSFECIGNV-------------------------SVMRAALECCHK-GWGTSVIVGVAA 291 (371)
Q Consensus 251 ~~~~--gg~dvvid~~g~~-------------------------~~~~~~~~~l~~-~~G~iv~~g~~~ 291 (371)
+... +++|++++++|.. .+.+.++..|.. +.|+||.+++..
T Consensus 122 ~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~ 190 (346)
T 3kvo_A 122 KAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPL 190 (346)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 2221 3799999998841 123445555543 138999997643
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=96.64 E-value=0.018 Score=48.55 Aligned_cols=92 Identities=17% Similarity=0.224 Sum_probs=62.6
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE-ecCCCCCchHHHHHHhhcCCCccEEEEccCC
Q 017431 189 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 266 (371)
Q Consensus 189 ~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~gg~dvvid~~g~ 266 (371)
+|||+|+ |.+|...++.+...|+ +|+++++++++.+.+. -+...+ .|..+ .+. +.+ +++|++|+++|.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~-~~~~~~~~D~~d--~~~-~~~-----~~~d~vi~~ag~ 71 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNAGKITQTH-KDINILQKDIFD--LTL-SDL-----SDQNVVVDAYGI 71 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCSHHHHHHC-SSSEEEECCGGG--CCH-HHH-----TTCSEEEECCCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCchhhhhcc-CCCeEEeccccC--hhh-hhh-----cCCCEEEECCcC
Confidence 6999998 9999999999999998 8999999888766543 333222 22222 111 221 369999999986
Q ss_pred H--------HHHHHHHHHhccC-CceEEEEccC
Q 017431 267 V--------SVMRAALECCHKG-WGTSVIVGVA 290 (371)
Q Consensus 267 ~--------~~~~~~~~~l~~~-~G~iv~~g~~ 290 (371)
. .....+++.+... .+++|.+++.
T Consensus 72 ~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~ 104 (221)
T 3ew7_A 72 SPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGA 104 (221)
T ss_dssp STTTTTSHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred CccccchHHHHHHHHHHHHHhcCCceEEEEecc
Confidence 3 2345666666652 2688888654
|
| >2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0012 Score=56.85 Aligned_cols=101 Identities=16% Similarity=0.157 Sum_probs=67.9
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc----CCc--EEecCCCCCchHHHHHHhhc-C
Q 017431 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVT--EFVNPKDHDKPIQQVLVDLT-D 254 (371)
Q Consensus 182 ~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~----g~~--~vi~~~~~~~~~~~~~~~~~-~ 254 (371)
....++++||-+|+| .|..+..+++.....+|++++.+++..+.+++. |.. ..+...+ ..+.+.... .
T Consensus 50 ~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d----~~~~~~~~~~~ 124 (233)
T 2gpy_A 50 LKMAAPARILEIGTA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGD----ALQLGEKLELY 124 (233)
T ss_dssp HHHHCCSEEEEECCT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSC----GGGSHHHHTTS
T ss_pred HhccCCCEEEEecCC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECC----HHHHHHhcccC
Confidence 345578899999998 688888999988434999999999887777643 542 1121222 111112222 2
Q ss_pred CCccEEEEccCC---HHHHHHHHHHhccCCceEEEEc
Q 017431 255 GGVDYSFECIGN---VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 255 gg~dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~g 288 (371)
+.||+|+..... ...++.+.+.|+++ |.++...
T Consensus 125 ~~fD~I~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~ 160 (233)
T 2gpy_A 125 PLFDVLFIDAAKGQYRRFFDMYSPMVRPG-GLILSDN 160 (233)
T ss_dssp CCEEEEEEEGGGSCHHHHHHHHGGGEEEE-EEEEEET
T ss_pred CCccEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEEc
Confidence 479999865543 45678889999997 9988753
|
| >3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=96.64 E-value=0.013 Score=50.10 Aligned_cols=101 Identities=16% Similarity=0.151 Sum_probs=67.4
Q ss_pred hcCCCCCCCEEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHh----cCCc--EE-ecCCCCCchHHHHHH
Q 017431 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAA--GASRVIGIDIDPKKFDRAKN----FGVT--EF-VNPKDHDKPIQQVLV 250 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~--g~~~v~~v~~~~~~~~~~~~----~g~~--~v-i~~~~~~~~~~~~~~ 250 (371)
...+.+++.+||=+|+| .|..++.+++.+ +. +|++++.+++..+.+++ .|.. .+ +.. .+..+.+.
T Consensus 50 ~~~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~----gda~~~l~ 123 (221)
T 3dr5_A 50 ATTNGNGSTGAIAITPA-AGLVGLYILNGLADNT-TLTCIDPESEHQRQAKALFREAGYSPSRVRFLL----SRPLDVMS 123 (221)
T ss_dssp HHSCCTTCCEEEEESTT-HHHHHHHHHHHSCTTS-EEEEECSCHHHHHHHHHHHHHTTCCGGGEEEEC----SCHHHHGG
T ss_pred HhhCCCCCCCEEEEcCC-chHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEE----cCHHHHHH
Confidence 34445556699988886 688888999987 45 99999999987776653 4443 22 212 22333333
Q ss_pred hhcCCCccEEEEccCC---HHHHHHHHHHhccCCceEEEE
Q 017431 251 DLTDGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 251 ~~~~gg~dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~ 287 (371)
...++.||+||-.... ...++.+.+.|+++ |.++.-
T Consensus 124 ~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~d 162 (221)
T 3dr5_A 124 RLANDSYQLVFGQVSPMDLKALVDAAWPLLRRG-GALVLA 162 (221)
T ss_dssp GSCTTCEEEEEECCCTTTHHHHHHHHHHHEEEE-EEEEET
T ss_pred HhcCCCcCeEEEcCcHHHHHHHHHHHHHHcCCC-cEEEEe
Confidence 3324589999854332 34688999999996 988753
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0064 Score=53.33 Aligned_cols=79 Identities=22% Similarity=0.221 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHH-cCCCeEEEEcCChhhHHHH----HhcCCc-EE--ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKA-AGASRVIGIDIDPKKFDRA----KNFGVT-EF--VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~-~g~~~v~~v~~~~~~~~~~----~~~g~~-~v--i~~~~~~~~~~~~~~~~~~-- 254 (371)
++++|||+|+ |.+|.+.+..+.. .|+ +|++++++.++.+.+ ++.+.. .. .|..+ .......+.+...
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 80 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD-LQSIRALRDFLRKEY 80 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCC-HHHHHHHHHHHHHhc
Confidence 5689999988 9999998887777 899 899998887654432 222322 22 23322 1222222322211
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|++|+++|.
T Consensus 81 g~id~li~~Ag~ 92 (276)
T 1wma_A 81 GGLDVLVNNAGI 92 (276)
T ss_dssp SSEEEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 379999998873
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0033 Score=55.26 Aligned_cols=79 Identities=15% Similarity=0.102 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh-HHHHHhcCCcEE-ecCCCCCchHHHHHHhhc--CCCccEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-FDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYS 260 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~-~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~--~gg~dvv 260 (371)
.++++||+|+ |++|.+.++.+...|+ +|+++++++++ .+.+++.+...+ .|..+ .....+.+.+.. .+++|++
T Consensus 26 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~iD~l 103 (260)
T 3gem_A 26 SSAPILITGASQRVGLHCALRLLEHGH-RVIISYRTEHASVTELRQAGAVALYGDFSC-ETGIMAFIDLLKTQTSSLRAV 103 (260)
T ss_dssp -CCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESSCCHHHHHHHHHTCEEEECCTTS-HHHHHHHHHHHHHHCSCCSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHhcCCeEEECCCCC-HHHHHHHHHHHHHhcCCCCEE
Confidence 4678999988 9999999998888899 78888887765 344455565332 23333 122222232221 2379999
Q ss_pred EEccCC
Q 017431 261 FECIGN 266 (371)
Q Consensus 261 id~~g~ 266 (371)
++++|.
T Consensus 104 v~nAg~ 109 (260)
T 3gem_A 104 VHNASE 109 (260)
T ss_dssp EECCCC
T ss_pred EECCCc
Confidence 998884
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0057 Score=53.38 Aligned_cols=74 Identities=19% Similarity=0.043 Sum_probs=48.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH---hcCCcEE-ecCCCCCchHHHHHHhhcC--CCccEE
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK---NFGVTEF-VNPKDHDKPIQQVLVDLTD--GGVDYS 260 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~---~~g~~~v-i~~~~~~~~~~~~~~~~~~--gg~dvv 260 (371)
+++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +.+.... ++. .+..+.+.+... +++|++
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~----~~v~~~~~~~~~~~g~iD~l 76 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKPMSE----QEPAELIEAVTSAYGQVDVL 76 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEECCC----CSHHHHHHHHHHHHSCCCEE
T ss_pred eEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCcEEEECH----HHHHHHHHHHHHHhCCCCEE
Confidence 47899988 9999999999989999 8999988877654433 2243222 222 223333332221 379999
Q ss_pred EEccCC
Q 017431 261 FECIGN 266 (371)
Q Consensus 261 id~~g~ 266 (371)
+++.|.
T Consensus 77 v~nAg~ 82 (254)
T 1zmt_A 77 VSNDIF 82 (254)
T ss_dssp EEECCC
T ss_pred EECCCc
Confidence 998874
|
| >1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A* | Back alignment and structure |
|---|
Probab=96.62 E-value=0.001 Score=57.44 Aligned_cols=99 Identities=22% Similarity=0.223 Sum_probs=69.1
Q ss_pred hhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCcEE-ecCCCCCchHHHHHHhhc
Q 017431 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEF-VNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 179 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~~v-i~~~~~~~~~~~~~~~~~ 253 (371)
.....+.++++||.+|+| .|..+..+++..+ .+|++++.+++..+.+++ .|...+ +...+ . .....
T Consensus 84 ~~~l~~~~~~~vLdiG~G-~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d----~---~~~~~ 154 (235)
T 1jg1_A 84 LEIANLKPGMNILEVGTG-SGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGD----G---SKGFP 154 (235)
T ss_dssp HHHHTCCTTCCEEEECCT-TSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC----G---GGCCG
T ss_pred HHhcCCCCCCEEEEEeCC-cCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECC----c---ccCCC
Confidence 344568899999999998 7888999999887 499999999987776654 443221 11111 1 01122
Q ss_pred CC-CccEEEEccCCHHHHHHHHHHhccCCceEEEE
Q 017431 254 DG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 254 ~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
.+ +||+|+.+..-......+.+.|+++ |+++..
T Consensus 155 ~~~~fD~Ii~~~~~~~~~~~~~~~L~pg-G~lvi~ 188 (235)
T 1jg1_A 155 PKAPYDVIIVTAGAPKIPEPLIEQLKIG-GKLIIP 188 (235)
T ss_dssp GGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred CCCCccEEEECCcHHHHHHHHHHhcCCC-cEEEEE
Confidence 23 5999998766545567888999997 988765
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0052 Score=55.15 Aligned_cols=73 Identities=11% Similarity=0.040 Sum_probs=53.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCc--EEecCCCCCchHHHHHHhhcCCCccEEEE
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVT--EFVNPKDHDKPIQQVLVDLTDGGVDYSFE 262 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~g~~--~vi~~~~~~~~~~~~~~~~~~gg~dvvid 262 (371)
++++|+|+|+|++|.+++..+...|+.+|+++.++.++.+ ++++++.. .++ .+ +.+.+.. .++|++++
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~-------~~-~~~~~~~-~~aDivIn 210 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYF-------SL-AEAETRL-AEYDIIIN 210 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEE-------CH-HHHHHTG-GGCSEEEE
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCcee-------eH-HHHHhhh-ccCCEEEE
Confidence 6789999999999999999999999888999999987754 55666642 122 11 1222221 26999999
Q ss_pred ccCCH
Q 017431 263 CIGNV 267 (371)
Q Consensus 263 ~~g~~ 267 (371)
|++..
T Consensus 211 ~t~~~ 215 (297)
T 2egg_A 211 TTSVG 215 (297)
T ss_dssp CSCTT
T ss_pred CCCCC
Confidence 99863
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0069 Score=53.01 Aligned_cols=79 Identities=20% Similarity=0.299 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc-----CCc-EE--ecCCCCCchHHHHHHhhcCC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF-----GVT-EF--VNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~-----g~~-~v--i~~~~~~~~~~~~~~~~~~g 255 (371)
.++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ +++ +.. .. .|..+ .....+.+.+....
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~ 83 (260)
T 2z1n_A 6 QGKLAVVTAGSSGLGFASALELARNGA-RLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIRE-PGDIDRLFEKARDL 83 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTC-HHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCC-HHHHHHHHHHHHHh
Confidence 4689999988 9999999998888999 899998988765433 222 211 22 23333 12233333333222
Q ss_pred -CccEEEEccCC
Q 017431 256 -GVDYSFECIGN 266 (371)
Q Consensus 256 -g~dvvid~~g~ 266 (371)
++|+++++.|.
T Consensus 84 ~gid~lv~~Ag~ 95 (260)
T 2z1n_A 84 GGADILVYSTGG 95 (260)
T ss_dssp TCCSEEEECCCC
T ss_pred cCCCEEEECCCC
Confidence 49999999873
|
| >3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0019 Score=54.27 Aligned_cols=133 Identities=17% Similarity=0.244 Sum_probs=75.9
Q ss_pred ceeeeEE-ecccceEecCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEc
Q 017431 140 TFSQYTV-VHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID 218 (371)
Q Consensus 140 ~~a~~~~-v~~~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~ 218 (371)
.|.+|.. .+....+.+++.+++..+..-.... ....+.. .+.++++||-+|+|. |..+..+++ .+..+|++++
T Consensus 17 ~w~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~--~~~~l~~--~~~~~~~vLDiG~G~-G~~~~~l~~-~~~~~v~~vD 90 (205)
T 3grz_A 17 EWEDYQPVFKDQEIIRLDPGLAFGTGNHQTTQL--AMLGIER--AMVKPLTVADVGTGS-GILAIAAHK-LGAKSVLATD 90 (205)
T ss_dssp TTCCCCCSSTTCEEEEESCC-----CCHHHHHH--HHHHHHH--HCSSCCEEEEETCTT-SHHHHHHHH-TTCSEEEEEE
T ss_pred cccccccCCCCceeEEecCCcccCCCCCccHHH--HHHHHHH--hccCCCEEEEECCCC-CHHHHHHHH-CCCCEEEEEE
Confidence 5566655 5667778888777554432111000 1111111 156789999999875 667777776 4666999999
Q ss_pred CChhhHHHHHh----cCCc--EEecCCCCCchHHHHHHhhcCCCccEEEEccCCH---HHHHHHHHHhccCCceEEEEc
Q 017431 219 IDPKKFDRAKN----FGVT--EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV---SVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 219 ~~~~~~~~~~~----~g~~--~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~---~~~~~~~~~l~~~~G~iv~~g 288 (371)
.+++..+.+++ .+.. .++..+- .+...+.+|+|+....-. ..++.+.+.|+++ |+++..+
T Consensus 91 ~s~~~~~~a~~~~~~~~~~~v~~~~~d~---------~~~~~~~fD~i~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~ 159 (205)
T 3grz_A 91 ISDESMTAAEENAALNGIYDIALQKTSL---------LADVDGKFDLIVANILAEILLDLIPQLDSHLNED-GQVIFSG 159 (205)
T ss_dssp SCHHHHHHHHHHHHHTTCCCCEEEESST---------TTTCCSCEEEEEEESCHHHHHHHGGGSGGGEEEE-EEEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCceEEEeccc---------cccCCCCceEEEECCcHHHHHHHHHHHHHhcCCC-CEEEEEe
Confidence 99987777654 3432 2222111 111234799999754432 2355566678886 9888753
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.016 Score=50.45 Aligned_cols=96 Identities=19% Similarity=0.245 Sum_probs=63.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcC--CCccEEEEc
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTD--GGVDYSFEC 263 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~--gg~dvvid~ 263 (371)
+++|||+|+ |++|.+.++.+...|+ +|+++++++++.+. ....++..+ .......+.+... +++|+++++
T Consensus 22 ~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~-----~~~~~d~~d-~~~v~~~~~~~~~~~g~iD~li~~ 94 (251)
T 3orf_A 22 SKNILVLGGSGALGAEVVKFFKSKSW-NTISIDFRENPNAD-----HSFTIKDSG-EEEIKSVIEKINSKSIKVDTFVCA 94 (251)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCTTSS-----EEEECSCSS-HHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCcccccc-----cceEEEeCC-HHHHHHHHHHHHHHcCCCCEEEEC
Confidence 679999988 9999999999989999 89999888764321 111223222 1233333333322 379999999
Q ss_pred cCC-----------H---------------HHHHHHHHHhccCCceEEEEccC
Q 017431 264 IGN-----------V---------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 264 ~g~-----------~---------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+|. . .+.+.+...+.++ |++|.+++.
T Consensus 95 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~ 146 (251)
T 3orf_A 95 AGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQG-GLFVLTGAS 146 (251)
T ss_dssp CCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCG
T ss_pred CccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccC-CEEEEEech
Confidence 883 0 1244555666775 999999764
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0047 Score=54.95 Aligned_cols=76 Identities=20% Similarity=0.244 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcE--E--ecCCCCCchHHHHHHhhc--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE--F--VNPKDHDKPIQQVLVDLT--D 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~--v--i~~~~~~~~~~~~~~~~~--~ 254 (371)
++++|||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +.+... . .|..+ .....+.+.+.. .
T Consensus 27 ~~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~~ 104 (286)
T 1xu9_A 27 QGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMED-MTFAEQFVAQAGKLM 104 (286)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCC-HHHHHHHHHHHHHHc
Confidence 4689999988 9999999998888999 8999999887665432 234322 2 23322 112222222221 1
Q ss_pred CCccEEEEc
Q 017431 255 GGVDYSFEC 263 (371)
Q Consensus 255 gg~dvvid~ 263 (371)
+++|+++++
T Consensus 105 g~iD~li~n 113 (286)
T 1xu9_A 105 GGLDMLILN 113 (286)
T ss_dssp TSCSEEEEC
T ss_pred CCCCEEEEC
Confidence 379999988
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.01 Score=52.23 Aligned_cols=102 Identities=18% Similarity=0.277 Sum_probs=62.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v-~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~~-- 254 (371)
.++++||+|+ +++|.+.++.+...|+ +|+.+ .+++++.+.+ ++.+.... .|..+ .....+.+.+...
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~ 103 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSD-PAAVRRLFATAEEAF 103 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 5789999988 9999998888888899 77766 4455443322 33444332 23333 1222222222221
Q ss_pred CCccEEEEccCCH-------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 255 GGVDYSFECIGNV-------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 255 gg~dvvid~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+++|++++++|.. .+++.++..|..+ |++|.+++.
T Consensus 104 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-g~iv~isS~ 163 (267)
T 3u5t_A 104 GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVG-GRIINMSTS 163 (267)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCT
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CeEEEEeCh
Confidence 3799999998741 1245566667775 999998763
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0064 Score=53.77 Aligned_cols=79 Identities=16% Similarity=0.235 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc---C---Cc-EE--ecCCCCCchHHHHHHhhcC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF---G---VT-EF--VNPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~---g---~~-~v--i~~~~~~~~~~~~~~~~~~ 254 (371)
.++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ +++ . .. .. .|..+ .....+.+.+...
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~ 82 (278)
T 1spx_A 5 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTT-DAGQDEILSTTLG 82 (278)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCC-HHHHHHHHHHHHH
Confidence 4688999988 9999999988888999 899999988765533 223 2 11 11 23332 1222222322211
Q ss_pred --CCccEEEEccCC
Q 017431 255 --GGVDYSFECIGN 266 (371)
Q Consensus 255 --gg~dvvid~~g~ 266 (371)
+++|+++++.|.
T Consensus 83 ~~g~id~lv~~Ag~ 96 (278)
T 1spx_A 83 KFGKLDILVNNAGA 96 (278)
T ss_dssp HHSCCCEEEECCC-
T ss_pred HcCCCCEEEECCCC
Confidence 379999998874
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.013 Score=51.77 Aligned_cols=79 Identities=19% Similarity=0.297 Sum_probs=50.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh-------H-H---HHHhcCCcEE---ecCCCCCchHHHHHH
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-------F-D---RAKNFGVTEF---VNPKDHDKPIQQVLV 250 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~-------~-~---~~~~~g~~~v---i~~~~~~~~~~~~~~ 250 (371)
+++++||+|+ +++|.+.++.+...|+ +|+.++++.++ . + .+++.+.... .|..+ .....+.+.
T Consensus 5 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~ 82 (274)
T 3e03_A 5 SGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIRE-EDQVRAAVA 82 (274)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTC-HHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHH
Confidence 5789999988 9999999988888999 89998887643 1 1 2223343222 23333 122222222
Q ss_pred hhcC--CCccEEEEccCC
Q 017431 251 DLTD--GGVDYSFECIGN 266 (371)
Q Consensus 251 ~~~~--gg~dvvid~~g~ 266 (371)
+... +++|+++++.|.
T Consensus 83 ~~~~~~g~iD~lvnnAG~ 100 (274)
T 3e03_A 83 ATVDTFGGIDILVNNASA 100 (274)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCc
Confidence 2221 379999999884
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0073 Score=52.13 Aligned_cols=75 Identities=20% Similarity=0.261 Sum_probs=50.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE-ecCCCCCchHHHHHHhhcC--CCccEEEE
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTD--GGVDYSFE 262 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~--gg~dvvid 262 (371)
++++||+|+ |++|.+.++.+...|+ +|+++++++++ ..++++...+ .|..+ .+..+.+.+... +++|++++
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~-~V~~~~r~~~~--~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~g~id~lv~ 76 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGY-RVAIASRNPEE--AAQSLGAVPLPTDLEK--DDPKGLVKRALEALGGLHVLVH 76 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHH--HHHHHTCEEEECCTTT--SCHHHHHHHHHHHHTSCCEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHH--HHHhhCcEEEecCCch--HHHHHHHHHHHHHcCCCCEEEE
Confidence 578999988 9999999999988999 89999888765 3444553222 23332 333333332221 37999999
Q ss_pred ccCC
Q 017431 263 CIGN 266 (371)
Q Consensus 263 ~~g~ 266 (371)
+.|.
T Consensus 77 ~Ag~ 80 (239)
T 2ekp_A 77 AAAV 80 (239)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 8873
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=96.57 E-value=0.013 Score=52.10 Aligned_cols=77 Identities=21% Similarity=0.176 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCcEE---ecCCCCCchHHHHHHhhcCCCccEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEF---VNPKDHDKPIQQVLVDLTDGGVDYS 260 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~v---i~~~~~~~~~~~~~~~~~~gg~dvv 260 (371)
+|+++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +++.... .|..+ .+-...+.+.. +++|++
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~-~~iD~l 90 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARRGA-TVIMAVRDTRKGEAAARTMAGQVEVRELDLQD--LSSVRRFADGV-SGADVL 90 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTSSSEEEEEECCTTC--HHHHHHHHHTC-CCEEEE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCeeEEEcCCCC--HHHHHHHHHhc-CCCCEE
Confidence 5789999988 9999999998888999 8999999988766543 4543222 23322 22222333322 479999
Q ss_pred EEccCC
Q 017431 261 FECIGN 266 (371)
Q Consensus 261 id~~g~ 266 (371)
++++|.
T Consensus 91 v~nAg~ 96 (291)
T 3rd5_A 91 INNAGI 96 (291)
T ss_dssp EECCCC
T ss_pred EECCcC
Confidence 998884
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0081 Score=52.64 Aligned_cols=79 Identities=23% Similarity=0.246 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcC--CcE-EecCCCCCchHHHHHHhhcC--CCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFG--VTE-FVNPKDHDKPIQQVLVDLTD--GGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g--~~~-vi~~~~~~~~~~~~~~~~~~--gg~d 258 (371)
.++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+ +++. ... ..|..+ .....+.+.+... +++|
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d-~~~v~~~~~~~~~~~g~iD 88 (263)
T 3ak4_A 11 SGRKAIVTGGSKGIGAAIARALDKAGA-TVAIADLDVMAAQAVVAGLENGGFAVEVDVTK-RASVDAAMQKAIDALGGFD 88 (263)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCTTCCEEEECCTTC-HHHHHHHHHHHHHHHTCCC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCC-HHHHHHHHHHHHHHcCCCC
Confidence 4789999988 9999999998888999 899999988766544 3342 211 123332 1222222322211 3799
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
++++++|.
T Consensus 89 ~lv~~Ag~ 96 (263)
T 3ak4_A 89 LLCANAGV 96 (263)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 99998873
|
| >1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.012 Score=53.06 Aligned_cols=89 Identities=22% Similarity=0.297 Sum_probs=66.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
-.|++|.|+|.|.+|...++.++.+|+ +|++.+++.++ +.+.++|+.. . ++.+.+. ..|+|+.++
T Consensus 140 l~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~-~-------~l~ell~-----~aDvV~l~~ 204 (307)
T 1wwk_A 140 LEGKTIGIIGFGRIGYQVAKIANALGM-NILLYDPYPNE-ERAKEVNGKF-V-------DLETLLK-----ESDVVTIHV 204 (307)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHTTCEE-C-------CHHHHHH-----HCSEEEECC
T ss_pred cCCceEEEEccCHHHHHHHHHHHHCCC-EEEEECCCCCh-hhHhhcCccc-c-------CHHHHHh-----hCCEEEEec
Confidence 468899999999999999999999999 89999988876 5566777632 1 1223332 389999887
Q ss_pred CCH----HHH-HHHHHHhccCCceEEEEcc
Q 017431 265 GNV----SVM-RAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 265 g~~----~~~-~~~~~~l~~~~G~iv~~g~ 289 (371)
... +.+ ...+..|+++ +.+|.++.
T Consensus 205 p~~~~t~~li~~~~l~~mk~g-a~lin~ar 233 (307)
T 1wwk_A 205 PLVESTYHLINEERLKLMKKT-AILINTSR 233 (307)
T ss_dssp CCSTTTTTCBCHHHHHHSCTT-CEEEECSC
T ss_pred CCChHHhhhcCHHHHhcCCCC-eEEEECCC
Confidence 742 112 4567788886 88888765
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.013 Score=51.64 Aligned_cols=71 Identities=14% Similarity=0.048 Sum_probs=51.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCC--cEEecCCCCCchHHHHHHhhcCCCccEEE
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGV--TEFVNPKDHDKPIQQVLVDLTDGGVDYSF 261 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~g~--~~vi~~~~~~~~~~~~~~~~~~gg~dvvi 261 (371)
-.++++||+|+|++|.+++..+...|+.+|+++.++.++.+ ++++++. ...+...+ +....+|+|+
T Consensus 118 l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~-----------l~~~~~DivI 186 (272)
T 3pwz_A 118 LRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEA-----------LEGQSFDIVV 186 (272)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGG-----------GTTCCCSEEE
T ss_pred ccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHH-----------hcccCCCEEE
Confidence 36889999999999999999888899879999999988755 4555553 12222211 1113799999
Q ss_pred EccCC
Q 017431 262 ECIGN 266 (371)
Q Consensus 262 d~~g~ 266 (371)
+|++.
T Consensus 187 naTp~ 191 (272)
T 3pwz_A 187 NATSA 191 (272)
T ss_dssp ECSSG
T ss_pred ECCCC
Confidence 99875
|
| >1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A* | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0092 Score=54.95 Aligned_cols=104 Identities=15% Similarity=0.149 Sum_probs=70.5
Q ss_pred hhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC----hhh---------HHHHHhcCCcEEecCCCC
Q 017431 175 LGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID----PKK---------FDRAKNFGVTEFVNPKDH 241 (371)
Q Consensus 175 ~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~----~~~---------~~~~~~~g~~~vi~~~~~ 241 (371)
+.++.....--++.+|+|.|+|..|..+++++..+|+++|+.++++ .+| .+++++.... ..
T Consensus 180 ~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~----~~-- 253 (388)
T 1vl6_A 180 LNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPE----RL-- 253 (388)
T ss_dssp HHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTT----CC--
T ss_pred HHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhcc----Cc--
Confidence 3334333323467899999999999999999999999899999988 544 4455543320 11
Q ss_pred CchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 242 ~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
..++.+.++ ++|++|-+++..-.-+..++.|+++ -.++.++.+
T Consensus 254 ~~~L~eav~-----~ADVlIG~Sap~l~t~emVk~Ma~~-pIIfalSNP 296 (388)
T 1vl6_A 254 SGDLETALE-----GADFFIGVSRGNILKPEWIKKMSRK-PVIFALANP 296 (388)
T ss_dssp CSCHHHHHT-----TCSEEEECSCSSCSCHHHHTTSCSS-CEEEECCSS
T ss_pred hhhHHHHHc-----cCCEEEEeCCCCccCHHHHHhcCCC-CEEEEcCCC
Confidence 134555443 3899999888433357777888885 766666554
|
| >2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0022 Score=55.53 Aligned_cols=99 Identities=15% Similarity=0.141 Sum_probs=67.5
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----cCCcE-E-ecCCCCCchHHHHHHhhc--
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTE-F-VNPKDHDKPIQQVLVDLT-- 253 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~v~~v~~~~~~~~~~~~----~g~~~-v-i~~~~~~~~~~~~~~~~~-- 253 (371)
...++++||-+|+| .|..+..+++..+ ..+|++++.+++..+.+++ .|... + +.. .+..+.+.+..
T Consensus 57 ~~~~~~~VLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~----~d~~~~~~~~~~~ 131 (239)
T 2hnk_A 57 KISGAKRIIEIGTF-TGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKL----GSALETLQVLIDS 131 (239)
T ss_dssp HHHTCSEEEEECCT-TCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE----SCHHHHHHHHHHC
T ss_pred HhhCcCEEEEEeCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEE----CCHHHHHHHHHhh
Confidence 45578899999987 5888889999874 3399999999987776654 35422 1 111 12222222221
Q ss_pred ------------C-CCccEEEEccCCH---HHHHHHHHHhccCCceEEEE
Q 017431 254 ------------D-GGVDYSFECIGNV---SVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 254 ------------~-gg~dvvid~~g~~---~~~~~~~~~l~~~~G~iv~~ 287 (371)
+ +.||+|+...... ..++.+.+.|+++ |.++.-
T Consensus 132 ~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~ 180 (239)
T 2hnk_A 132 KSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPG-GLLIAD 180 (239)
T ss_dssp SSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEE
T ss_pred cccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCC-eEEEEE
Confidence 2 5799999765543 4578899999997 998865
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=96.53 E-value=0.015 Score=51.50 Aligned_cols=79 Identities=13% Similarity=0.188 Sum_probs=51.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh----cCCcEE---ecCCCCCchHHHHHHhhcC-
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN----FGVTEF---VNPKDHDKPIQQVLVDLTD- 254 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~----~g~~~v---i~~~~~~~~~~~~~~~~~~- 254 (371)
-+|+++||+|+ +++|.+.++.+...|+ +|++++++.++.+.+ ++ .+.... .|..+ .....+.+.+...
T Consensus 25 l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~ 102 (277)
T 4fc7_A 25 LRDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRA-PPAVMAAVDQALKE 102 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHH
Confidence 35789999988 8999999998888999 899998887654322 22 243322 23333 1222222322221
Q ss_pred -CCccEEEEccC
Q 017431 255 -GGVDYSFECIG 265 (371)
Q Consensus 255 -gg~dvvid~~g 265 (371)
+++|++++++|
T Consensus 103 ~g~id~lv~nAg 114 (277)
T 4fc7_A 103 FGRIDILINCAA 114 (277)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCc
Confidence 37999999988
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0078 Score=53.29 Aligned_cols=79 Identities=20% Similarity=0.252 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcE-E--ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~-v--i~~~~~~~~~~~~~~~~~~--g 255 (371)
+|+++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +.+... . .|..+ .....+.+.+... +
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~~g 108 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQ-PDQVRGMLDQMTGELG 108 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 5789999988 9999999988888999 8999999887654332 233322 2 23333 1222223332221 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|++++++|.
T Consensus 109 ~iD~lvnnAg~ 119 (276)
T 3r1i_A 109 GIDIAVCNAGI 119 (276)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999998874
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0043 Score=53.82 Aligned_cols=79 Identities=15% Similarity=0.178 Sum_probs=45.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcC--CCccEEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTD--GGVDYSFE 262 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~--gg~dvvid 262 (371)
.++++||+|+ |++|.+.++.+.. |+ +|+++++++++.+.+.+......+..+-.+....+.+.+... +++|++++
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~-g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~ 81 (245)
T 3e9n_A 4 KKKIAVVTGATGGMGIEIVKDLSR-DH-IVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVH 81 (245)
T ss_dssp --CEEEEESTTSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEEEE
Confidence 4689999988 9999987776654 87 899999998887766654322222111000000001111111 37999999
Q ss_pred ccCC
Q 017431 263 CIGN 266 (371)
Q Consensus 263 ~~g~ 266 (371)
++|.
T Consensus 82 ~Ag~ 85 (245)
T 3e9n_A 82 AAAV 85 (245)
T ss_dssp CC--
T ss_pred CCCc
Confidence 8885
|
| >3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A* | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0065 Score=58.11 Aligned_cols=92 Identities=23% Similarity=0.278 Sum_probs=69.0
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
.-.|++|.|+|.|.+|..+++.++.+|+ +|++++++..+...+...|.. + .++.+.+ ...|+++.+
T Consensus 274 ~L~GktVgIIG~G~IG~~vA~~l~~~G~-~V~v~d~~~~~~~~a~~~G~~-~-------~~l~ell-----~~aDiVi~~ 339 (494)
T 3d64_A 274 MIAGKIAVVAGYGDVGKGCAQSLRGLGA-TVWVTEIDPICALQAAMEGYR-V-------VTMEYAA-----DKADIFVTA 339 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSCHHHHHHHHTTTCE-E-------CCHHHHT-----TTCSEEEEC
T ss_pred ccCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCChHhHHHHHHcCCE-e-------CCHHHHH-----hcCCEEEEC
Confidence 4578999999999999999999999999 999999988765344455653 1 1122222 258999998
Q ss_pred cCCHHHH-HHHHHHhccCCceEEEEccC
Q 017431 264 IGNVSVM-RAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 264 ~g~~~~~-~~~~~~l~~~~G~iv~~g~~ 290 (371)
++....+ ...++.|+++ ..++.++..
T Consensus 340 ~~t~~lI~~~~l~~MK~g-AilINvgrg 366 (494)
T 3d64_A 340 TGNYHVINHDHMKAMRHN-AIVCNIGHF 366 (494)
T ss_dssp SSSSCSBCHHHHHHCCTT-EEEEECSSS
T ss_pred CCcccccCHHHHhhCCCC-cEEEEcCCC
Confidence 8765544 5677889996 888888764
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0079 Score=52.38 Aligned_cols=79 Identities=16% Similarity=0.283 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-c-----C-C-cEE--ecCCCCCchHHHHHHhhcC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-F-----G-V-TEF--VNPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~-~-----g-~-~~v--i~~~~~~~~~~~~~~~~~~ 254 (371)
.++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ + + . ... .|..+ .....+.+.+...
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~ 83 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITD-CTKADTEIKDIHQ 83 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTC-HHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCC-HHHHHHHHHHHHH
Confidence 4689999988 9999998888888899 89999998876554322 1 2 1 122 23333 1222222322221
Q ss_pred --CCccEEEEccCC
Q 017431 255 --GGVDYSFECIGN 266 (371)
Q Consensus 255 --gg~dvvid~~g~ 266 (371)
+++|++++++|.
T Consensus 84 ~~g~iD~lvnnAg~ 97 (250)
T 3nyw_A 84 KYGAVDILVNAAAM 97 (250)
T ss_dssp HHCCEEEEEECCCC
T ss_pred hcCCCCEEEECCCc
Confidence 379999999884
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.51 E-value=0.017 Score=50.21 Aligned_cols=74 Identities=23% Similarity=0.159 Sum_probs=50.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
.+++++||+|+ |++|.+.++.+...|+ +|++++++++. +++++....+ .+...+....+.+.. ++|+++++
T Consensus 17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~---~~~~~~~~~~--~D~~~~~~~~~~~~~--~iD~lv~~ 88 (249)
T 1o5i_A 17 IRDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEEL---LKRSGHRYVV--CDLRKDLDLLFEKVK--EVDILVLN 88 (249)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHH---HHHTCSEEEE--CCTTTCHHHHHHHSC--CCSEEEEC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHH---HHhhCCeEEE--eeHHHHHHHHHHHhc--CCCEEEEC
Confidence 45789999988 9999999998888999 89999888743 3444432222 222233433333332 79999998
Q ss_pred cCC
Q 017431 264 IGN 266 (371)
Q Consensus 264 ~g~ 266 (371)
+|.
T Consensus 89 Ag~ 91 (249)
T 1o5i_A 89 AGG 91 (249)
T ss_dssp CCC
T ss_pred CCC
Confidence 873
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.51 E-value=0.022 Score=48.99 Aligned_cols=76 Identities=18% Similarity=0.160 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCcEEe--cCCCCCchHHHHHHhhcCCCccEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFV--NPKDHDKPIQQVLVDLTDGGVDYSF 261 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~vi--~~~~~~~~~~~~~~~~~~gg~dvvi 261 (371)
+++++||+|+ |.+|.+.++.+...|+ +|+++++++++.+.+. +.....++ |..+ .+-.+.+.+ ..+++|+++
T Consensus 6 ~~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~-~~~~id~vi 81 (244)
T 1cyd_A 6 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDLGD--WDATEKALG-GIGPVDLLV 81 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTC--HHHHHHHHT-TCCCCSEEE
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCCcEEecCCC--HHHHHHHHH-HcCCCCEEE
Confidence 4689999988 9999999999988999 8999988887665433 33222232 2222 222222222 113699999
Q ss_pred EccC
Q 017431 262 ECIG 265 (371)
Q Consensus 262 d~~g 265 (371)
+++|
T Consensus 82 ~~Ag 85 (244)
T 1cyd_A 82 NNAA 85 (244)
T ss_dssp ECCC
T ss_pred ECCc
Confidence 9988
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.51 E-value=0.019 Score=50.71 Aligned_cols=80 Identities=24% Similarity=0.409 Sum_probs=50.4
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-------------ChhhHHHH----HhcCCcEE---ecCCCCCc
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-------------DPKKFDRA----KNFGVTEF---VNPKDHDK 243 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~-------------~~~~~~~~----~~~g~~~v---i~~~~~~~ 243 (371)
-.|+++||+|+ +++|.+.++.+...|+ +|+++++ ++++.+.+ ++.+.... .|..+ ..
T Consensus 13 l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~ 90 (280)
T 3pgx_A 13 LQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRD-DA 90 (280)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC-HH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HH
Confidence 46789999988 9999999998889999 8888876 34443322 33444322 23333 12
Q ss_pred hHHHHHHhhcC--CCccEEEEccCC
Q 017431 244 PIQQVLVDLTD--GGVDYSFECIGN 266 (371)
Q Consensus 244 ~~~~~~~~~~~--gg~dvvid~~g~ 266 (371)
...+.+.+... +++|++++++|.
T Consensus 91 ~v~~~~~~~~~~~g~id~lvnnAg~ 115 (280)
T 3pgx_A 91 ALRELVADGMEQFGRLDVVVANAGV 115 (280)
T ss_dssp HHHHHHHHHHHHHCCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 22222222211 379999998884
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.51 E-value=0.011 Score=51.68 Aligned_cols=78 Identities=24% Similarity=0.281 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEe--cCCCCCchHHHHHHhhcC--CCccEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV--NPKDHDKPIQQVLVDLTD--GGVDYS 260 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi--~~~~~~~~~~~~~~~~~~--gg~dvv 260 (371)
+++++||+|+ |++|.+.++.+...|+ +|+++++++++.+..+++.. ..+ |..+ .....+.+.+... +++|++
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~-~~~~~~~~~~~~~~~g~iD~l 81 (256)
T 2d1y_A 5 AGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGG-AFFQVDLED-ERERVRFVEEAAYALGRVDVL 81 (256)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTC-EEEECCTTC-HHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhhC-CEEEeeCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 4689999988 9999999998888999 89999888776444455532 332 3332 1223333332211 379999
Q ss_pred EEccCC
Q 017431 261 FECIGN 266 (371)
Q Consensus 261 id~~g~ 266 (371)
+++.|.
T Consensus 82 v~~Ag~ 87 (256)
T 2d1y_A 82 VNNAAI 87 (256)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 998873
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.51 E-value=0.028 Score=50.03 Aligned_cols=80 Identities=16% Similarity=0.209 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCC--eEEEEcCChhhHHHHH-hc-----CCcE-E--ecCCCCCchHHHHHHhhc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGAS--RVIGIDIDPKKFDRAK-NF-----GVTE-F--VNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~--~v~~v~~~~~~~~~~~-~~-----g~~~-v--i~~~~~~~~~~~~~~~~~ 253 (371)
.++++||+|+ +++|.+.+..+...|+. +|+.++++.++.+.+. ++ +... . .|..+ .....+.+.+..
T Consensus 32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~ 110 (287)
T 3rku_A 32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQ-AEKIKPFIENLP 110 (287)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTC-GGGHHHHHHTSC
T ss_pred CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCC-HHHHHHHHHHHH
Confidence 4689999988 99999977766665653 7888888887665443 22 3222 1 23333 233444444443
Q ss_pred C--CCccEEEEccCC
Q 017431 254 D--GGVDYSFECIGN 266 (371)
Q Consensus 254 ~--gg~dvvid~~g~ 266 (371)
. +++|++++++|.
T Consensus 111 ~~~g~iD~lVnnAG~ 125 (287)
T 3rku_A 111 QEFKDIDILVNNAGK 125 (287)
T ss_dssp GGGCSCCEEEECCCC
T ss_pred HhcCCCCEEEECCCc
Confidence 3 279999998873
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.51 E-value=0.01 Score=51.07 Aligned_cols=97 Identities=24% Similarity=0.255 Sum_probs=60.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCC-Cc-hHH---HHHHhhcC-CCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH-DK-PIQ---QVLVDLTD-GGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~-~~-~~~---~~~~~~~~-gg~d 258 (371)
+++++||+|+ |++|.+.++.+...|+ +|+++++++++.+ +....+ ..+. +. ... +.+.+..+ +++|
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~-~~D~~~~~~~~~~~~~~~~~~~~g~id 74 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQA-----DSNILV-DGNKNWTEQEQSILEQTASSLQGSQVD 74 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTS-----SEEEEC-CTTSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecCccccc-----cccEEE-eCCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence 3578999988 9999999999999999 8999988776432 111111 1111 01 111 12222222 4799
Q ss_pred EEEEccCC--------H------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 259 YSFECIGN--------V------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 259 vvid~~g~--------~------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
++++++|. . .+.+.++..|.++ |++|.+++.
T Consensus 75 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~ 131 (236)
T 1ooe_A 75 GVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG-GLLQLTGAA 131 (236)
T ss_dssp EEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCG
T ss_pred EEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccC-CEEEEECch
Confidence 99999882 1 0134455556665 899998764
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=96.50 E-value=0.015 Score=52.50 Aligned_cols=76 Identities=11% Similarity=0.169 Sum_probs=50.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC---hhhHHH-HHhc----CCc-EEecCCCCCchHHHHHHhhcCC
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID---PKKFDR-AKNF----GVT-EFVNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~---~~~~~~-~~~~----g~~-~vi~~~~~~~~~~~~~~~~~~g 255 (371)
-.++++||+|+|++|.+++..+...|+++|+++.++ .++.+. ++++ +.. .++...+ ..++.+.+.
T Consensus 152 l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~-~~~l~~~l~----- 225 (315)
T 3tnl_A 152 IIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIED-HEQLRKEIA----- 225 (315)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC-HHHHHHHHH-----
T ss_pred ccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccch-HHHHHhhhc-----
Confidence 368899999999999999999999999889999898 555443 3332 321 2333322 011222221
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
.+|+|++|++-
T Consensus 226 ~aDiIINaTp~ 236 (315)
T 3tnl_A 226 ESVIFTNATGV 236 (315)
T ss_dssp TCSEEEECSST
T ss_pred CCCEEEECccC
Confidence 59999999874
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0073 Score=52.81 Aligned_cols=79 Identities=19% Similarity=0.298 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEE---ecCCCCCchHHHHHHhhcC--CCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF---VNPKDHDKPIQQVLVDLTD--GGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~v---i~~~~~~~~~~~~~~~~~~--gg~d 258 (371)
.++++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+ ++++.... .|..+ .....+.+.+... +++|
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id 85 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDRDKAGAERVAGEIGDAALAVAADISK-EADVDAAVEAALSKFGKVD 85 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTS-HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHhcCCCC
Confidence 4689999988 8999999998889999 899999998876644 45554332 23222 1222222322221 3799
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
++++++|.
T Consensus 86 ~li~~Ag~ 93 (261)
T 3n74_A 86 ILVNNAGI 93 (261)
T ss_dssp EEEECCCC
T ss_pred EEEECCcc
Confidence 99998873
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=96.49 E-value=0.019 Score=51.85 Aligned_cols=79 Identities=20% Similarity=0.313 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC------------hhhHH----HHHhcCCcEE---ecCCCCCchH
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID------------PKKFD----RAKNFGVTEF---VNPKDHDKPI 245 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~------------~~~~~----~~~~~g~~~v---i~~~~~~~~~ 245 (371)
.|+++||+|+ +++|.+.++.+...|+ +|++++++ .++.+ .+++.+.... .|..+ ....
T Consensus 45 ~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v 122 (317)
T 3oec_A 45 QGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRD-LASL 122 (317)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHH
Confidence 5789999988 9999999999989999 88888765 33222 2233454332 23332 1222
Q ss_pred HHHHHhhcC--CCccEEEEccCC
Q 017431 246 QQVLVDLTD--GGVDYSFECIGN 266 (371)
Q Consensus 246 ~~~~~~~~~--gg~dvvid~~g~ 266 (371)
.+.+.+... +++|++++++|.
T Consensus 123 ~~~~~~~~~~~g~iD~lVnnAg~ 145 (317)
T 3oec_A 123 QAVVDEALAEFGHIDILVSNVGI 145 (317)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCC
Confidence 222332221 379999998884
|
| >3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* | Back alignment and structure |
|---|
Probab=96.49 E-value=0.00095 Score=57.82 Aligned_cols=98 Identities=17% Similarity=0.177 Sum_probs=67.4
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC----cEEecCCCCCchHHHHHHhhcCCCccE
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV----TEFVNPKDHDKPIQQVLVDLTDGGVDY 259 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~----~~vi~~~~~~~~~~~~~~~~~~gg~dv 259 (371)
..+|.+||-+|.| .|..+..+++..+. +|++++.+++-.+.+++... ...+.. .++.........+.||.
T Consensus 58 ~~~G~rVLdiG~G-~G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~~----~~a~~~~~~~~~~~FD~ 131 (236)
T 3orh_A 58 SSKGGRVLEVGFG-MAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLK----GLWEDVAPTLPDGHFDG 131 (236)
T ss_dssp TTTCEEEEEECCT-TSHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEE----SCHHHHGGGSCTTCEEE
T ss_pred ccCCCeEEEECCC-ccHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhCCCceEEEe----ehHHhhcccccccCCce
Confidence 4688999999997 57888888887666 89999999998888876432 111211 23433344444447997
Q ss_pred EE-EccCC----------HHHHHHHHHHhccCCceEEEEc
Q 017431 260 SF-ECIGN----------VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 260 vi-d~~g~----------~~~~~~~~~~l~~~~G~iv~~g 288 (371)
|+ |+... ...++.+.+.|++| |+++.+.
T Consensus 132 i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPG-G~l~f~~ 170 (236)
T 3orh_A 132 ILYDTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYCN 170 (236)
T ss_dssp EEECCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEECC
T ss_pred EEEeeeecccchhhhcchhhhhhhhhheeCCC-CEEEEEe
Confidence 74 55432 23567889999997 9998764
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=96.48 E-value=0.013 Score=50.51 Aligned_cols=98 Identities=19% Similarity=0.180 Sum_probs=60.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCC-Cc-hHHH---HHHhhcC-CCc
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH-DK-PIQQ---VLVDLTD-GGV 257 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~-~~-~~~~---~~~~~~~-gg~ 257 (371)
.+++++||+|+ |++|.+.++.+...|+ +|+++++++++.+ +....+ ..+. +. ...+ .+.+..+ +++
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~-~~D~~~~~~v~~~~~~~~~~~~~g~i 77 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEA-----SASVIV-KMTDSFTEQADQVTAEVGKLLGDQKV 77 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTS-----SEEEEC-CCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCChhhcc-----CCcEEE-EcCCCCHHHHHHHHHHHHHHhCCCCC
Confidence 35789999988 9999999998888899 8999988776432 111111 1111 01 1222 2222222 479
Q ss_pred cEEEEccCCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 258 DYSFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 258 dvvid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
|++++++|.. .+.+.++..|.++ |++|.+++.
T Consensus 78 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-g~iv~isS~ 135 (241)
T 1dhr_A 78 DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG-GLLTLAGAK 135 (241)
T ss_dssp EEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCG
T ss_pred CEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccC-CEEEEECCH
Confidence 9999988720 0233445556665 899998764
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.47 E-value=0.024 Score=50.05 Aligned_cols=33 Identities=33% Similarity=0.437 Sum_probs=29.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI 219 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~ 219 (371)
.|+++||+|+ +++|.+.++.+...|+ +|+++++
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r 43 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDI 43 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEec
Confidence 5789999988 9999999999889999 8998877
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=96.47 E-value=0.01 Score=51.92 Aligned_cols=79 Identities=24% Similarity=0.471 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc----CCcEE---ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF----GVTEF---VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~----g~~~v---i~~~~~~~~~~~~~~~~~~-- 254 (371)
+++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ +++ +.... .|..+ .....+.+.+...
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 83 (263)
T 3ai3_A 6 SGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVAT-PEGVDAVVESVRSSF 83 (263)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4689999988 9999999998888999 899999988765433 222 43222 23332 1222222322211
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|++++++|.
T Consensus 84 g~id~lv~~Ag~ 95 (263)
T 3ai3_A 84 GGADILVNNAGT 95 (263)
T ss_dssp SSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 379999999873
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=96.47 E-value=0.023 Score=50.37 Aligned_cols=34 Identities=29% Similarity=0.356 Sum_probs=30.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID 220 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~ 220 (371)
.|+++||+|+ +++|.+.++.+...|+ +|++++++
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~ 44 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDIC 44 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEecc
Confidence 5789999988 8999999998889999 89988776
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=96.46 E-value=0.011 Score=51.73 Aligned_cols=102 Identities=18% Similarity=0.242 Sum_probs=62.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHHH----HHhcCCcEE---ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDR----AKNFGVTEF---VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v-~~~~~~~~~----~~~~g~~~v---i~~~~~~~~~~~~~~~~~~-- 254 (371)
.|+++||+|+ +++|.+.++.+...|+ +|+++ .+++++.+. +++.+.... .|..+ .....+.+.+...
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTN-AAEVEAAISAAADKF 84 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHh
Confidence 5789999988 9999999998888999 77777 555544332 233443222 23322 1222222322221
Q ss_pred CCccEEEEccCCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 255 GGVDYSFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 255 gg~dvvid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+++|+++++.|.. .+.+.++..+.++ |++|.+++.
T Consensus 85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-g~iv~isS~ 145 (259)
T 3edm_A 85 GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKG-GAIVTFSSQ 145 (259)
T ss_dssp CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEECCH
T ss_pred CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CEEEEEcCH
Confidence 3799999988631 1234444556665 899988763
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0087 Score=52.02 Aligned_cols=79 Identities=18% Similarity=0.258 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hhHH-HHHhcCCcEE---ecCCCCCchHHHHHHhhcC--CCc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKFD-RAKNFGVTEF---VNPKDHDKPIQQVLVDLTD--GGV 257 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~-~~~~-~~~~~g~~~v---i~~~~~~~~~~~~~~~~~~--gg~ 257 (371)
+++++||+|+ |++|.+.+..+...|+ +|+++++++ ++.+ .+++.+.... .|..+ .....+.+.+... +++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~i 83 (249)
T 2ew8_A 6 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQ-PGDVEAFGKQVISTFGRC 83 (249)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCchhHHHHHHHhcCCcEEEEEeecCC-HHHHHHHHHHHHHHcCCC
Confidence 4689999988 9999999998888999 899988876 5443 3445554322 23332 1222222222211 379
Q ss_pred cEEEEccCC
Q 017431 258 DYSFECIGN 266 (371)
Q Consensus 258 dvvid~~g~ 266 (371)
|++++++|.
T Consensus 84 d~lv~nAg~ 92 (249)
T 2ew8_A 84 DILVNNAGI 92 (249)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999998873
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.46 E-value=0.01 Score=51.35 Aligned_cols=77 Identities=19% Similarity=0.288 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE--ecCCCCCchHHHHHHhhcCCCccEEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF--VNPKDHDKPIQQVLVDLTDGGVDYSFE 262 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v--i~~~~~~~~~~~~~~~~~~gg~dvvid 262 (371)
+++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.++.-... .|..+ .+-.+.+.+.. +++|++++
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~-~~id~lv~ 80 (246)
T 2ag5_A 5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTK--KKQIDQFANEV-ERLDVLFN 80 (246)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTC--HHHHHHHHHHC-SCCSEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhccCceEEEeeCCC--HHHHHHHHHHh-CCCCEEEE
Confidence 4789999988 9999999998888999 89999888776544333321122 23332 22222222222 47999999
Q ss_pred ccCC
Q 017431 263 CIGN 266 (371)
Q Consensus 263 ~~g~ 266 (371)
++|.
T Consensus 81 ~Ag~ 84 (246)
T 2ag5_A 81 VAGF 84 (246)
T ss_dssp CCCC
T ss_pred CCcc
Confidence 8873
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=96.46 E-value=0.016 Score=50.52 Aligned_cols=78 Identities=15% Similarity=0.183 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH----HhcCCcE-E--ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~-~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~~~~~~~-- 254 (371)
++++|||+|+ |.+|.+.++.+...|+ +|+++++ ++++.+.+ ++.+... . .|..+ .....+.+.+...
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 83 (261)
T 1gee_A 6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTV-ESDVINLVQSAIKEF 83 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 4689999988 9999999988888899 8888888 66554322 2234322 1 23222 1222222332211
Q ss_pred CCccEEEEccC
Q 017431 255 GGVDYSFECIG 265 (371)
Q Consensus 255 gg~dvvid~~g 265 (371)
+++|++|+++|
T Consensus 84 g~id~li~~Ag 94 (261)
T 1gee_A 84 GKLDVMINNAG 94 (261)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 36999999887
|
| >2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=96.44 E-value=0.0043 Score=52.46 Aligned_cols=100 Identities=19% Similarity=0.266 Sum_probs=69.1
Q ss_pred hhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----cCCcEE-ecCCCCCchHHHHHHhh
Q 017431 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTEF-VNPKDHDKPIQQVLVDL 252 (371)
Q Consensus 179 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~v~~v~~~~~~~~~~~~----~g~~~v-i~~~~~~~~~~~~~~~~ 252 (371)
.....+.++++||.+|+| .|..+..+++..|. .+|++++.+++..+.+++ .+...+ +...+ .. ...
T Consensus 70 ~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d----~~---~~~ 141 (215)
T 2yxe_A 70 CELLDLKPGMKVLEIGTG-CGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGD----GT---LGY 141 (215)
T ss_dssp HHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESC----GG---GCC
T ss_pred HHhhCCCCCCEEEEECCC-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECC----cc---cCC
Confidence 345567899999999998 58888999998862 389999999987777654 233221 11111 10 011
Q ss_pred c-CCCccEEEEccCCHHHHHHHHHHhccCCceEEEE
Q 017431 253 T-DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 253 ~-~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
. .+.||+|+....-.+..+.+.+.|+++ |+++..
T Consensus 142 ~~~~~fD~v~~~~~~~~~~~~~~~~L~pg-G~lv~~ 176 (215)
T 2yxe_A 142 EPLAPYDRIYTTAAGPKIPEPLIRQLKDG-GKLLMP 176 (215)
T ss_dssp GGGCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred CCCCCeeEEEECCchHHHHHHHHHHcCCC-cEEEEE
Confidence 1 237999998766545567888999997 998866
|
| >1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A* | Back alignment and structure |
|---|
Probab=96.44 E-value=0.021 Score=50.59 Aligned_cols=100 Identities=13% Similarity=0.182 Sum_probs=69.5
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc----CCc-E-EecCCCCCchHHHHHHh
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVT-E-FVNPKDHDKPIQQVLVD 251 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~----g~~-~-vi~~~~~~~~~~~~~~~ 251 (371)
+....++.++.+||-+|+|. |..+..+++..|+ +|++++.+++..+.+++. |.. . .+...+ + .+
T Consensus 56 ~~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d----~----~~ 125 (287)
T 1kpg_A 56 ALGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAG----W----EQ 125 (287)
T ss_dssp HHTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESC----G----GG
T ss_pred HHHHcCCCCcCEEEEECCcc-cHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECC----h----hh
Confidence 34566788999999999874 7788888877798 999999999887777653 321 1 111111 1 12
Q ss_pred hcCCCccEEEEc-----cC---CHHHHHHHHHHhccCCceEEEEcc
Q 017431 252 LTDGGVDYSFEC-----IG---NVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 252 ~~~gg~dvvid~-----~g---~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
.. +.||+|+.. .+ -...++.+.+.|+++ |+++....
T Consensus 126 ~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~ 169 (287)
T 1kpg_A 126 FD-EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD-GVMLLHTI 169 (287)
T ss_dssp CC-CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT-CEEEEEEE
T ss_pred CC-CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCC-CEEEEEEe
Confidence 22 579999864 22 135688899999997 99887643
|
| >3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A* | Back alignment and structure |
|---|
Probab=96.43 E-value=0.011 Score=51.52 Aligned_cols=102 Identities=17% Similarity=0.152 Sum_probs=71.5
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCc----EEecCCCCCchHHHHHHhhc
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT----EFVNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~----~vi~~~~~~~~~~~~~~~~~ 253 (371)
+.....+.++.+||-+|+| .|..+..+++..++ +|++++.+++..+.+++.... .++...- .+. ...
T Consensus 47 ~~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~--~~~-----~~~ 117 (266)
T 3ujc_A 47 ILSDIELNENSKVLDIGSG-LGGGCMYINEKYGA-HTHGIDICSNIVNMANERVSGNNKIIFEANDI--LTK-----EFP 117 (266)
T ss_dssp HTTTCCCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHTCCSCTTEEEEECCT--TTC-----CCC
T ss_pred HHHhcCCCCCCEEEEECCC-CCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhhcCCCeEEEECcc--ccC-----CCC
Confidence 4456678899999999987 78888888887787 999999999999888876432 1221111 000 111
Q ss_pred CCCccEEEEccCC--------HHHHHHHHHHhccCCceEEEEcc
Q 017431 254 DGGVDYSFECIGN--------VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 254 ~gg~dvvid~~g~--------~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
++.||+|+....- ...++.+.+.|+++ |.++....
T Consensus 118 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~ 160 (266)
T 3ujc_A 118 ENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPT-GTLLITDY 160 (266)
T ss_dssp TTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred CCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCC-CEEEEEEe
Confidence 2379999975321 23578889999997 99887754
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0053 Score=52.42 Aligned_cols=87 Identities=14% Similarity=0.210 Sum_probs=58.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
.++++||+|+ +++|.+.++.+...|+ +|++++++++ .|..+ .....+.+.+. +++|+++++.
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~-------------~D~~~-~~~v~~~~~~~--g~id~lv~nA 67 (223)
T 3uce_A 5 DKTVYVVLGGTSGIGAELAKQLESEHT-IVHVASRQTG-------------LDISD-EKSVYHYFETI--GAFDHLIVTA 67 (223)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHCSTTE-EEEEESGGGT-------------CCTTC-HHHHHHHHHHH--CSEEEEEECC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEecCCcc-------------cCCCC-HHHHHHHHHHh--CCCCEEEECC
Confidence 4678999988 9999999888888899 8998877654 22222 12222233332 4688888887
Q ss_pred CCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 265 GNV--------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 265 g~~--------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
|.. ...+.+++.+.++ |++|.+++.
T Consensus 68 g~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~~sS~ 118 (223)
T 3uce_A 68 GSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQG-GSITLTSGM 118 (223)
T ss_dssp CCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEE-EEEEEECCG
T ss_pred CCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCC-eEEEEecch
Confidence 731 1234455556675 999999764
|
| >1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3 | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0075 Score=57.47 Aligned_cols=92 Identities=28% Similarity=0.377 Sum_probs=68.9
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
.-.|++|.|+|.|.+|..+++.++.+|+ +|++++++..+...+...|.. + .++.+.+ ...|+++.+
T Consensus 254 ~l~GktVgIIG~G~IG~~vA~~l~~~G~-~Viv~d~~~~~~~~a~~~g~~-~-------~~l~ell-----~~aDiVi~~ 319 (479)
T 1v8b_A 254 LISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFN-V-------VTLDEIV-----DKGDFFITC 319 (479)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCE-E-------CCHHHHT-----TTCSEEEEC
T ss_pred ccCCCEEEEEeeCHHHHHHHHHHHhCcC-EEEEEeCChhhHHHHHHcCCE-e-------cCHHHHH-----hcCCEEEEC
Confidence 4578999999999999999999999999 999999988765444556652 1 1122222 258999988
Q ss_pred cCCHHHH-HHHHHHhccCCceEEEEccC
Q 017431 264 IGNVSVM-RAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 264 ~g~~~~~-~~~~~~l~~~~G~iv~~g~~ 290 (371)
++....+ ...++.|+++ +.++.+|..
T Consensus 320 ~~t~~lI~~~~l~~MK~g-ailiNvgrg 346 (479)
T 1v8b_A 320 TGNVDVIKLEHLLKMKNN-AVVGNIGHF 346 (479)
T ss_dssp CSSSSSBCHHHHTTCCTT-CEEEECSST
T ss_pred CChhhhcCHHHHhhcCCC-cEEEEeCCC
Confidence 7765544 4677788996 888888764
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.42 E-value=0.03 Score=49.56 Aligned_cols=80 Identities=19% Similarity=0.241 Sum_probs=50.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHH----HHhcCCcEE---ecCCCCCchHHHHHHhhcC-
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDR----AKNFGVTEF---VNPKDHDKPIQQVLVDLTD- 254 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~-~~~~~~~----~~~~g~~~v---i~~~~~~~~~~~~~~~~~~- 254 (371)
..++++||+|+ |++|.+.++.+...|+ +|+++++ ++++.+. +++.+.... .|..+ .....+.+.+...
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~ 104 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLGARVIFLRADLAD-LSSHQATVDAVVAE 104 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTS-GGGHHHHHHHHHHH
T ss_pred cCCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHH
Confidence 35789999988 9999999999889999 8888874 5554332 223344322 23333 1233333333222
Q ss_pred -CCccEEEEccCC
Q 017431 255 -GGVDYSFECIGN 266 (371)
Q Consensus 255 -gg~dvvid~~g~ 266 (371)
+++|++++++|.
T Consensus 105 ~g~iD~lvnnAg~ 117 (280)
T 4da9_A 105 FGRIDCLVNNAGI 117 (280)
T ss_dssp HSCCCEEEEECC-
T ss_pred cCCCCEEEECCCc
Confidence 379999998875
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=96.42 E-value=0.01 Score=51.82 Aligned_cols=78 Identities=17% Similarity=0.239 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-H---hcCCcE-E--ecCCCCCchHHHHH---HhhcC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-K---NFGVTE-F--VNPKDHDKPIQQVL---VDLTD 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~---~~g~~~-v--i~~~~~~~~~~~~~---~~~~~ 254 (371)
.++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ + +.+... . .|..+ .....+.+ .+..+
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 85 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSS-RSERQELMNTVANHFH 85 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 4789999988 9999999988888999 899998888765432 2 234322 1 23332 11222222 22222
Q ss_pred CCccEEEEccC
Q 017431 255 GGVDYSFECIG 265 (371)
Q Consensus 255 gg~dvvid~~g 265 (371)
+++|++++++|
T Consensus 86 g~id~lv~~Ag 96 (260)
T 2ae2_A 86 GKLNILVNNAG 96 (260)
T ss_dssp TCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 57999999887
|
| >3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0058 Score=53.22 Aligned_cols=101 Identities=18% Similarity=0.189 Sum_probs=68.1
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----cCCc-EE-ecCCCCCchHHHHHHhhcCC
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVT-EF-VNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~v~~v~~~~~~~~~~~~----~g~~-~v-i~~~~~~~~~~~~~~~~~~g 255 (371)
...++.+||-+|+| .|..++.+++.++ ..+|++++.+++..+.+++ .|.. .+ +.. .+..+.+....+.
T Consensus 60 ~~~~~~~VLdiG~G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~----~d~~~~l~~~~~~ 134 (248)
T 3tfw_A 60 RLTQAKRILEIGTL-GGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLRE----GPALQSLESLGEC 134 (248)
T ss_dssp HHHTCSEEEEECCT-TSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEE----SCHHHHHHTCCSC
T ss_pred hhcCCCEEEEecCC-chHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE----cCHHHHHHhcCCC
Confidence 45578899999987 3788888998874 3499999999988777654 3543 11 111 2333334444333
Q ss_pred -CccEEEEccCC---HHHHHHHHHHhccCCceEEEEcc
Q 017431 256 -GVDYSFECIGN---VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 256 -g~dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
.||+|+-.... +..++.+.+.|+++ |.++.-..
T Consensus 135 ~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~~~~ 171 (248)
T 3tfw_A 135 PAFDLIFIDADKPNNPHYLRWALRYSRPG-TLIIGDNV 171 (248)
T ss_dssp CCCSEEEECSCGGGHHHHHHHHHHTCCTT-CEEEEECC
T ss_pred CCeEEEEECCchHHHHHHHHHHHHhcCCC-eEEEEeCC
Confidence 79999943322 35688889999997 98876543
|
| >3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A* | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0058 Score=54.80 Aligned_cols=101 Identities=15% Similarity=0.244 Sum_probs=71.9
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCc-EE-ecCCCCCchHHHHHHh
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT-EF-VNPKDHDKPIQQVLVD 251 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~-~v-i~~~~~~~~~~~~~~~ 251 (371)
+....+++++++||-+|+|. |..+..+++..|+ +|++++.+++..+.+++ .|.. .+ +...+ + .+
T Consensus 64 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d----~----~~ 133 (302)
T 3hem_A 64 ALDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQG----W----EE 133 (302)
T ss_dssp HHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECC----G----GG
T ss_pred HHHHcCCCCcCEEEEeeccC-cHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECC----H----HH
Confidence 45666789999999999974 8888999998887 99999999988777654 3432 11 11111 1 12
Q ss_pred hcCCCccEEEEccC-----C----------HHHHHHHHHHhccCCceEEEEccC
Q 017431 252 LTDGGVDYSFECIG-----N----------VSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 252 ~~~gg~dvvid~~g-----~----------~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
. ++.||+|+.... . ...++.+.+.|+++ |+++.....
T Consensus 134 ~-~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~~ 185 (302)
T 3hem_A 134 F-DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD-GRMLLHTIT 185 (302)
T ss_dssp C-CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTT-CEEEEEEEE
T ss_pred c-CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCC-cEEEEEEEe
Confidence 2 458999987322 1 25688899999997 999877553
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=96.41 E-value=0.035 Score=52.15 Aligned_cols=94 Identities=15% Similarity=0.261 Sum_probs=67.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEe-cCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi-~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
+.+|+|+|.|.+|...++.++..|. .|++++.++++.+.+++.|...++ |..+ .+.+.+..-..+|+++-+++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~g~~vi~GDat~-----~~~L~~agi~~A~~viv~~~ 77 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPDHIETLRKFGMKVFYGDATR-----MDLLESAGAAKAEVLINAID 77 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHTTCCCEESCTTC-----HHHHHHTTTTTCSEEEECCS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhCCCeEEEcCCCC-----HHHHHhcCCCccCEEEECCC
Confidence 4579999999999999999999999 899999999999999998875443 2222 22344432238999999999
Q ss_pred CHHHH---HHHHHHhccCCceEEEE
Q 017431 266 NVSVM---RAALECCHKGWGTSVIV 287 (371)
Q Consensus 266 ~~~~~---~~~~~~l~~~~G~iv~~ 287 (371)
..... -...+.+.+. -+++.-
T Consensus 78 ~~~~n~~i~~~ar~~~p~-~~Iiar 101 (413)
T 3l9w_A 78 DPQTNLQLTEMVKEHFPH-LQIIAR 101 (413)
T ss_dssp SHHHHHHHHHHHHHHCTT-CEEEEE
T ss_pred ChHHHHHHHHHHHHhCCC-CeEEEE
Confidence 86543 3334445564 566544
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=96.40 E-value=0.009 Score=52.11 Aligned_cols=79 Identities=27% Similarity=0.286 Sum_probs=52.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHH-HHhcCCcEE---ecCCCCCchHHHHHHhhcC--CCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR-AKNFGVTEF---VNPKDHDKPIQQVLVDLTD--GGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~-~~~~g~~~v---i~~~~~~~~~~~~~~~~~~--gg~d 258 (371)
+++++||+|+ |++|.+.++.+...|+ +|+++++++++.+. .++++.... .|..+ ...+.+.+.+... +++|
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~iD 81 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTI-EEDWQRVVAYAREEFGSVD 81 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence 4689999988 9999999999989999 89999898876554 344543221 23332 1223333332222 3799
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
++++++|.
T Consensus 82 ~lv~nAg~ 89 (254)
T 1hdc_A 82 GLVNNAGI 89 (254)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99998873
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=96.40 E-value=0.013 Score=51.75 Aligned_cols=74 Identities=16% Similarity=0.106 Sum_probs=52.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
++++++|+|+|++|.++++.+...|+ +|++++++.++.+ ++++++....++..+. . .+.+ +++|++++++
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G~-~V~v~~R~~~~~~~la~~~~~~~~~~~~~~-~----~~~~---~~~DivVn~t 188 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALSM-D----ELEG---HEFDLIINAT 188 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECCS-G----GGTT---CCCSEEEECC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHhhccCCeeEecH-H----Hhcc---CCCCEEEECC
Confidence 67899999999999999999999997 9999999988754 5555543100111110 1 1111 4799999999
Q ss_pred CCHH
Q 017431 265 GNVS 268 (371)
Q Consensus 265 g~~~ 268 (371)
+...
T Consensus 189 ~~~~ 192 (271)
T 1nyt_A 189 SSGI 192 (271)
T ss_dssp SCGG
T ss_pred CCCC
Confidence 9743
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=96.40 E-value=0.021 Score=50.23 Aligned_cols=79 Identities=22% Similarity=0.265 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHH----HHhcCCcEE---ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDR----AKNFGVTEF---VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~-~~~~~~~----~~~~g~~~v---i~~~~~~~~~~~~~~~~~~-- 254 (371)
.++++||+|+ |++|.+.++.+...|+ +|+++++ ++++.+. +++.+.... .|..+ .....+.+.+...
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~v~~~~~~~~~~~ 104 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELAAAGA-KVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQ-ESEVEALFAAVIERW 104 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 4789999988 9999999998888999 7877766 4444332 233444332 23332 1222222222221
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|++++++|.
T Consensus 105 g~id~lv~nAg~ 116 (269)
T 4dmm_A 105 GRLDVLVNNAGI 116 (269)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 379999998875
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.0065 Score=53.15 Aligned_cols=78 Identities=21% Similarity=0.331 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h---cCCcEE---ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N---FGVTEF---VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~---~g~~~v---i~~~~~~~~~~~~~~~~~~--g 255 (371)
+++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. + .+.... .|..+ .....+.+.+... +
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g 82 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRN-TDDIQKMIEQIDEKFG 82 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4789999988 9999999999889999 8999999887765443 2 233221 23332 1222222322221 3
Q ss_pred CccEEEEccC
Q 017431 256 GVDYSFECIG 265 (371)
Q Consensus 256 g~dvvid~~g 265 (371)
++|+++++.|
T Consensus 83 ~id~lv~nAg 92 (257)
T 3imf_A 83 RIDILINNAA 92 (257)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999999988
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=96.39 E-value=0.014 Score=51.26 Aligned_cols=86 Identities=13% Similarity=0.134 Sum_probs=60.1
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCC
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 266 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~ 266 (371)
+++++|+|+|++|.+++..+...|. +|+++.++.++.+.+.+++. ......+ +. .+|+|++|++.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~-~v~V~nRt~~ka~~la~~~~-~~~~~~~-----------l~--~~DiVInaTp~ 182 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGL-QVSVLNRSSRGLDFFQRLGC-DCFMEPP-----------KS--AFDLIINATSA 182 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCTTHHHHHHHTC-EEESSCC-----------SS--CCSEEEECCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCC-eEecHHH-----------hc--cCCEEEEcccC
Confidence 8999999999999999999999994 99999999888764447774 3333322 11 69999998874
Q ss_pred H-----HH-HHHHHHHhccCCceEEEEc
Q 017431 267 V-----SV-MRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 267 ~-----~~-~~~~~~~l~~~~G~iv~~g 288 (371)
. .. ...+...+.++ ..++++-
T Consensus 183 Gm~~~~~l~~~~l~~~l~~~-~~v~D~v 209 (269)
T 3phh_A 183 SLHNELPLNKEVLKGYFKEG-KLAYDLA 209 (269)
T ss_dssp CCCCSCSSCHHHHHHHHHHC-SEEEESC
T ss_pred CCCCCCCCChHHHHhhCCCC-CEEEEeC
Confidence 2 11 12222356775 6666663
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.036 Score=49.21 Aligned_cols=87 Identities=20% Similarity=0.259 Sum_probs=62.1
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCH
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 267 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~ 267 (371)
.+|.|+|+|.+|....+.+...|. +|++.++++++.+.+.+.|+.. . .+..+.+. ..|+||-|+..+
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~---~----~~~~~~~~-----~aDvvi~~vp~~ 68 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSPEKAEELAALGAER---A----ATPCEVVE-----SCPVTFAMLADP 68 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEE---C----SSHHHHHH-----HCSEEEECCSSH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCee---c----CCHHHHHh-----cCCEEEEEcCCH
Confidence 478999999999998888888898 8999999999988888777632 1 22333332 378999998865
Q ss_pred HHHHHHH-------HHhccCCceEEEEc
Q 017431 268 SVMRAAL-------ECCHKGWGTSVIVG 288 (371)
Q Consensus 268 ~~~~~~~-------~~l~~~~G~iv~~g 288 (371)
..++..+ ..+.++ ..++..+
T Consensus 69 ~~~~~v~~~~~~l~~~l~~~-~~vi~~s 95 (287)
T 3pef_A 69 AAAEEVCFGKHGVLEGIGEG-RGYVDMS 95 (287)
T ss_dssp HHHHHHHHSTTCHHHHCCTT-CEEEECS
T ss_pred HHHHHHHcCcchHhhcCCCC-CEEEeCC
Confidence 4455544 445564 5555553
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.39 E-value=0.016 Score=50.86 Aligned_cols=79 Identities=18% Similarity=0.261 Sum_probs=49.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHH----HHhcCCcEE---ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDR----AKNFGVTEF---VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~-~~~~~~~----~~~~g~~~v---i~~~~~~~~~~~~~~~~~~-- 254 (371)
++++|||+|+ |.+|.+.+..+...|+ +|+++++ ++++.+. +++.+.... .|..+ ...+.+.+.+...
T Consensus 20 ~~k~vlItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 97 (274)
T 1ja9_A 20 AGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISK-PSEVVALFDKAVSHF 97 (274)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHc
Confidence 4689999988 9999999998888999 8888877 6554432 223354322 23332 1222233332211
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|+++++.|.
T Consensus 98 ~~~d~vi~~Ag~ 109 (274)
T 1ja9_A 98 GGLDFVMSNSGM 109 (274)
T ss_dssp SCEEEEECCCCC
T ss_pred CCCCEEEECCCC
Confidence 379999998873
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=96.38 E-value=0.012 Score=50.95 Aligned_cols=102 Identities=23% Similarity=0.290 Sum_probs=64.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h---cCCcE-E--ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N---FGVTE-F--VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~---~g~~~-v--i~~~~~~~~~~~~~~~~~~--g 255 (371)
.++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. + .+... . .|..+ .....+.+.+... +
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g 83 (247)
T 2jah_A 6 QGKVALITGASSGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAGAKVHVLELDVAD-RQGVDAAVASTVEALG 83 (247)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 4689999988 9999999998888999 8999989877655332 2 24322 2 23332 1222222322221 3
Q ss_pred CccEEEEccCCH-------------------------HHHHHHHHHh-ccCCceEEEEccC
Q 017431 256 GVDYSFECIGNV-------------------------SVMRAALECC-HKGWGTSVIVGVA 290 (371)
Q Consensus 256 g~dvvid~~g~~-------------------------~~~~~~~~~l-~~~~G~iv~~g~~ 290 (371)
++|+++++.|.. .+.+.++..| ..+ |++|.+++.
T Consensus 84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~ 143 (247)
T 2jah_A 84 GLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSI 143 (247)
T ss_dssp CCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCG
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccH
Confidence 799999988731 1234444444 355 899998764
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.38 E-value=0.012 Score=51.92 Aligned_cols=79 Identities=20% Similarity=0.280 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE---ecCCCCCchHHH---HHHhhcC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQ---VLVDLTD 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~---~~~~~~~ 254 (371)
.++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++.+.... .|..+ .....+ .+.+..+
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 97 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLS-RTERDKLMQTVAHVFD 97 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 4689999988 9999999999888999 899999988765432 22343221 23322 112222 2222322
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|++++++|.
T Consensus 98 g~id~lv~nAg~ 109 (273)
T 1ae1_A 98 GKLNILVNNAGV 109 (273)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCcEEEECCCC
Confidence 579999998874
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.37 E-value=0.0095 Score=52.35 Aligned_cols=78 Identities=21% Similarity=0.321 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc-----CCcE-E--ecCCCCCchHHHHHHhhcC-
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF-----GVTE-F--VNPKDHDKPIQQVLVDLTD- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~-----g~~~-v--i~~~~~~~~~~~~~~~~~~- 254 (371)
.++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ++ +... . .|..+ .....+.+.+...
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~ 89 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD-EAQVEAYVTATTER 89 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTS-HHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 4689999988 9999999988888999 8999999887654332 22 3322 1 23332 1223233332221
Q ss_pred -CCccEEEEccC
Q 017431 255 -GGVDYSFECIG 265 (371)
Q Consensus 255 -gg~dvvid~~g 265 (371)
+++|++++++|
T Consensus 90 ~g~id~lv~nAg 101 (267)
T 1iy8_A 90 FGRIDGFFNNAG 101 (267)
T ss_dssp HSCCSEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 37999999887
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=96.37 E-value=0.0084 Score=53.20 Aligned_cols=79 Identities=18% Similarity=0.215 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEE---ecCCCCCchHHHHHHhhcC--CCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF---VNPKDHDKPIQQVLVDLTD--GGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~v---i~~~~~~~~~~~~~~~~~~--gg~d 258 (371)
.|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+ ++++.... .|..+ .......+.+... +++|
T Consensus 4 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~iD 81 (281)
T 3zv4_A 4 TGEVALITGGASGLGRALVDRFVAEGA-RVAVLDKSAERLRELEVAHGGNAVGVVGDVRS-LQDQKRAAERCLAAFGKID 81 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTBTTEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHHHHHhcCCCC
Confidence 4789999988 9999999999889999 899999988876544 34544332 23222 1222222222221 3799
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
++++++|.
T Consensus 82 ~lvnnAg~ 89 (281)
T 3zv4_A 82 TLIPNAGI 89 (281)
T ss_dssp EEECCCCC
T ss_pred EEEECCCc
Confidence 99998873
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0099 Score=52.30 Aligned_cols=79 Identities=20% Similarity=0.391 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh----cCCcEE---ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN----FGVTEF---VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~----~g~~~v---i~~~~~~~~~~~~~~~~~~-- 254 (371)
.++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++ .+.... .|..+ .......+.+...
T Consensus 20 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~ 97 (267)
T 1vl8_A 20 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN-YEEVKKLLEAVKEKF 97 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4689999988 9999999998888999 899998887765432 22 244322 23332 1222222322211
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|++++++|.
T Consensus 98 g~iD~lvnnAg~ 109 (267)
T 1vl8_A 98 GKLDTVVNAAGI 109 (267)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 379999998874
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.34 E-value=0.022 Score=51.73 Aligned_cols=79 Identities=18% Similarity=0.278 Sum_probs=48.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC-----hhhHHHH----HhcCCcE-E--ecCCCCCchHHHHHHhh
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID-----PKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDL 252 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~-----~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~~~~~ 252 (371)
+++++||+|+ |++|.+.++.+...|+ +|+++.++ +++.+.+ ++.+... . .|..+ ...+.+.+.+.
T Consensus 4 ~~k~vlVTGas~GIG~aia~~L~~~G~-~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd-~~~v~~~~~~~ 81 (324)
T 3u9l_A 4 SKKIILITGASSGFGRLTAEALAGAGH-RVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQS-QVSVDRAIDQI 81 (324)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTC-HHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCC-HHHHHHHHHHH
Confidence 3678999988 9999999999999999 88887664 2333322 2334322 1 23332 12333333332
Q ss_pred cC--CCccEEEEccCC
Q 017431 253 TD--GGVDYSFECIGN 266 (371)
Q Consensus 253 ~~--gg~dvvid~~g~ 266 (371)
.. +++|++++++|.
T Consensus 82 ~~~~g~iD~lVnnAG~ 97 (324)
T 3u9l_A 82 IGEDGRIDVLIHNAGH 97 (324)
T ss_dssp HHHHSCCSEEEECCCC
T ss_pred HHHcCCCCEEEECCCc
Confidence 21 379999999883
|
| >3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.34 E-value=0.00059 Score=57.74 Aligned_cols=99 Identities=17% Similarity=0.086 Sum_probs=67.6
Q ss_pred hhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCcEE-ecCCCCCchHHHHHHhhc
Q 017431 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEF-VNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 179 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~~v-i~~~~~~~~~~~~~~~~~ 253 (371)
.....+.++++||-+|+| .|..+..+++. +. +|++++.+++..+.+++ .+...+ +...+ ..+... .
T Consensus 70 ~~~l~~~~~~~vLdiG~G-~G~~~~~la~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d----~~~~~~--~ 140 (210)
T 3lbf_A 70 TELLELTPQSRVLEIGTG-SGYQTAILAHL-VQ-HVCSVERIKGLQWQARRRLKNLDLHNVSTRHGD----GWQGWQ--A 140 (210)
T ss_dssp HHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC----GGGCCG--G
T ss_pred HHhcCCCCCCEEEEEcCC-CCHHHHHHHHh-CC-EEEEEecCHHHHHHHHHHHHHcCCCceEEEECC----cccCCc--c
Confidence 455677899999999997 47788888888 66 99999999988776654 343321 11111 101000 1
Q ss_pred CCCccEEEEccCCHHHHHHHHHHhccCCceEEEE
Q 017431 254 DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 254 ~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
.+.||+|+....-....+.+.+.|+++ |+++..
T Consensus 141 ~~~~D~i~~~~~~~~~~~~~~~~L~pg-G~lv~~ 173 (210)
T 3lbf_A 141 RAPFDAIIVTAAPPEIPTALMTQLDEG-GILVLP 173 (210)
T ss_dssp GCCEEEEEESSBCSSCCTHHHHTEEEE-EEEEEE
T ss_pred CCCccEEEEccchhhhhHHHHHhcccC-cEEEEE
Confidence 237999998665545556788999997 998765
|
| >2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.32 E-value=0.019 Score=51.82 Aligned_cols=90 Identities=18% Similarity=0.228 Sum_probs=66.0
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
--.|++|.|+|.|.+|...++.++.+|+ +|++.+++.++. .+.++|+.. . +..+.+. ..|+|+.+
T Consensus 139 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~g~~~----~----~l~ell~-----~aDvVvl~ 203 (313)
T 2ekl_A 139 ELAGKTIGIVGFGRIGTKVGIIANAMGM-KVLAYDILDIRE-KAEKINAKA----V----SLEELLK-----NSDVISLH 203 (313)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSCCHH-HHHHTTCEE----C----CHHHHHH-----HCSEEEEC
T ss_pred CCCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCcchh-HHHhcCcee----c----CHHHHHh-----hCCEEEEe
Confidence 3568899999999999999999999999 899999888764 456777642 1 1223332 38999988
Q ss_pred cCCHH----HH-HHHHHHhccCCceEEEEcc
Q 017431 264 IGNVS----VM-RAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 264 ~g~~~----~~-~~~~~~l~~~~G~iv~~g~ 289 (371)
+.... .+ ...+..|+++ +.+|.++.
T Consensus 204 ~P~~~~t~~li~~~~l~~mk~g-a~lIn~ar 233 (313)
T 2ekl_A 204 VTVSKDAKPIIDYPQFELMKDN-VIIVNTSR 233 (313)
T ss_dssp CCCCTTSCCSBCHHHHHHSCTT-EEEEESSC
T ss_pred ccCChHHHHhhCHHHHhcCCCC-CEEEECCC
Confidence 77422 12 4567788886 88887755
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=96.31 E-value=0.02 Score=50.40 Aligned_cols=77 Identities=21% Similarity=0.300 Sum_probs=48.9
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE-EecCCCCCchHHHHHHhhcC--CCccE
Q 017431 184 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTD--GGVDY 259 (371)
Q Consensus 184 ~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~~~~~~~~--gg~dv 259 (371)
..++++|||+|+ +++|.+.++.+...|+ +|+++++++++.. . .... ..|..+ .....+.+.+... +++|+
T Consensus 11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~---~-~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~iD~ 84 (269)
T 3vtz_A 11 EFTDKVAIVTGGSSGIGLAVVDALVRYGA-KVVSVSLDEKSDV---N-VSDHFKIDVTN-EEEVKEAVEKTTKKYGRIDI 84 (269)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCC--CT---T-SSEEEECCTTC-HHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhcc---C-ceeEEEecCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 456899999988 9999999998888999 8999888766431 1 1111 133333 1222222322221 37999
Q ss_pred EEEccCC
Q 017431 260 SFECIGN 266 (371)
Q Consensus 260 vid~~g~ 266 (371)
+++++|.
T Consensus 85 lv~nAg~ 91 (269)
T 3vtz_A 85 LVNNAGI 91 (269)
T ss_dssp EEECCCC
T ss_pred EEECCCc
Confidence 9998874
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.31 E-value=0.01 Score=52.26 Aligned_cols=79 Identities=19% Similarity=0.302 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCcEE--ecCCCCCchHHHHHHhhcC--CCccE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEF--VNPKDHDKPIQQVLVDLTD--GGVDY 259 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~v--i~~~~~~~~~~~~~~~~~~--gg~dv 259 (371)
+++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ++..... .|..+ .....+.+.+... +++|+
T Consensus 8 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD~ 85 (270)
T 1yde_A 8 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQ-EDDVKTLVSETIRRFGRLDC 85 (270)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTS-HHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCeEEEcCCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 5789999988 9999999999989999 8999999887665443 3432222 23322 1222222222211 37999
Q ss_pred EEEccCC
Q 017431 260 SFECIGN 266 (371)
Q Consensus 260 vid~~g~ 266 (371)
++++.|.
T Consensus 86 lv~nAg~ 92 (270)
T 1yde_A 86 VVNNAGH 92 (270)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9998863
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=96.31 E-value=0.0052 Score=52.94 Aligned_cols=96 Identities=10% Similarity=0.103 Sum_probs=61.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhcCCcEE-ecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g-~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
++|||+|+ |.+|.+.++.+...| + +|+++++++++.+.+...++..+ .|..+ .+ .+.+... ++|++|++.
T Consensus 24 k~vlVtGatG~iG~~l~~~L~~~G~~-~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d--~~---~~~~~~~-~~D~vv~~a 96 (236)
T 3qvo_A 24 KNVLILGAGGQIARHVINQLADKQTI-KQTLFARQPAKIHKPYPTNSQIIMGDVLN--HA---ALKQAMQ-GQDIVYANL 96 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTTE-EEEEEESSGGGSCSSCCTTEEEEECCTTC--HH---HHHHHHT-TCSEEEEEC
T ss_pred cEEEEEeCCcHHHHHHHHHHHhCCCc-eEEEEEcChhhhcccccCCcEEEEecCCC--HH---HHHHHhc-CCCEEEEcC
Confidence 58999987 999999999999899 7 89999888776433222222211 22222 22 2333222 689999988
Q ss_pred CCHHH---HHHHHHHhccC-CceEEEEccC
Q 017431 265 GNVSV---MRAALECCHKG-WGTSVIVGVA 290 (371)
Q Consensus 265 g~~~~---~~~~~~~l~~~-~G~iv~~g~~ 290 (371)
+.... .+.+++.+... .++||.+++.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~ 126 (236)
T 3qvo_A 97 TGEDLDIQANSVIAAMKACDVKRLIFVLSL 126 (236)
T ss_dssp CSTTHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCchhHHHHHHHHHHHHcCCCEEEEEecc
Confidence 87432 34455555432 2689988764
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=96.31 E-value=0.023 Score=49.67 Aligned_cols=79 Identities=19% Similarity=0.341 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-C-hHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh---cCCcE--E--ecCCCCCchHHHHHHhhcC-
Q 017431 186 PGSIVAVFGL-G-TVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN---FGVTE--F--VNPKDHDKPIQQVLVDLTD- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g-~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~---~g~~~--v--i~~~~~~~~~~~~~~~~~~- 254 (371)
+++++||+|+ | ++|.+.+..+...|+ +|++++++.++.+.+ ++ .+... . .|..+ .....+.+.+...
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~ 98 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTS-TEAVDALITQTVEK 98 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCC-HHHHHHHHHHHHHH
Confidence 5789999988 6 799999988888899 899999988765433 22 22111 2 23332 1222222222221
Q ss_pred -CCccEEEEccCC
Q 017431 255 -GGVDYSFECIGN 266 (371)
Q Consensus 255 -gg~dvvid~~g~ 266 (371)
+.+|+++++.|-
T Consensus 99 ~g~id~li~~Ag~ 111 (266)
T 3o38_A 99 AGRLDVLVNNAGL 111 (266)
T ss_dssp HSCCCEEEECCCC
T ss_pred hCCCcEEEECCCc
Confidence 379999999884
|
| >1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=96.30 E-value=0.014 Score=52.58 Aligned_cols=92 Identities=18% Similarity=0.233 Sum_probs=63.2
Q ss_pred CEEEEEcCChHHHHHHHHHHH--cCCCeEEEEcCChhh--HHHHHhcCCcEEecCCCCCchHHHHHHhhcCC-CccEEEE
Q 017431 188 SIVAVFGLGTVGLAVAEGAKA--AGASRVIGIDIDPKK--FDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFE 262 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~--~g~~~v~~v~~~~~~--~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~g-g~dvvid 262 (371)
-+|.|+|+|.+|...+..+.. -+.+.+.++++++++ .++++++|..... .++ +.+.+.+++ ++|+|++
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~------~~~-e~ll~~~~~~~iDvV~~ 77 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY------AGV-EGLIKLPEFADIDFVFD 77 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES------SHH-HHHHHSGGGGGEEEEEE
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCccc------CCH-HHHHhccCCCCCcEEEE
Confidence 478999999999988887743 466455556777665 5677788864211 223 334343334 7999999
Q ss_pred ccCCHHHHHHHHHHhcc--CCceEEEE
Q 017431 263 CIGNVSVMRAALECCHK--GWGTSVIV 287 (371)
Q Consensus 263 ~~g~~~~~~~~~~~l~~--~~G~iv~~ 287 (371)
+++.....+.+..++.. | .++++.
T Consensus 78 atp~~~h~~~a~~al~a~~G-k~Vi~e 103 (312)
T 1nvm_B 78 ATSASAHVQNEALLRQAKPG-IRLIDL 103 (312)
T ss_dssp CSCHHHHHHHHHHHHHHCTT-CEEEEC
T ss_pred CCChHHHHHHHHHHHHhCCC-CEEEEc
Confidence 99976667888888887 7 776653
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=96.30 E-value=0.02 Score=52.92 Aligned_cols=93 Identities=17% Similarity=0.209 Sum_probs=65.0
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCH
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 267 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~ 267 (371)
-+|+|+|||.+|...++.+.. .. .|.+++++.++.+.++++.....+|..+ . +.+.+... ++|+|++|++..
T Consensus 17 mkilvlGaG~vG~~~~~~L~~-~~-~v~~~~~~~~~~~~~~~~~~~~~~d~~d--~---~~l~~~~~-~~DvVi~~~p~~ 88 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD-EF-DVYIGDVNNENLEKVKEFATPLKVDASN--F---DKLVEVMK-EFELVIGALPGF 88 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHTTTSEEEECCTTC--H---HHHHHHHT-TCSEEEECCCGG
T ss_pred cEEEEECCCHHHHHHHHHHhc-CC-CeEEEEcCHHHHHHHhccCCcEEEecCC--H---HHHHHHHh-CCCEEEEecCCc
Confidence 379999999999988877754 45 7888899999888887664433444443 2 23333322 589999999875
Q ss_pred HHHHHHHHHhccCCceEEEEcc
Q 017431 268 SVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 268 ~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
.....+-.|+..+ -.++.+..
T Consensus 89 ~~~~v~~~~~~~g-~~yvD~s~ 109 (365)
T 3abi_A 89 LGFKSIKAAIKSK-VDMVDVSF 109 (365)
T ss_dssp GHHHHHHHHHHHT-CEEEECCC
T ss_pred ccchHHHHHHhcC-cceEeeec
Confidence 4456666777775 77887753
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=96.28 E-value=0.015 Score=51.43 Aligned_cols=79 Identities=19% Similarity=0.265 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhc--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~--~g 255 (371)
+++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++.+.... .|..+ .....+.+.+.. -+
T Consensus 21 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g 98 (277)
T 2rhc_B 21 DSEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS-VPEIEALVAAVVERYG 98 (277)
T ss_dssp TSCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence 4689999988 9999999999888999 899999988765432 22343221 23332 122222222221 23
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|++++++|.
T Consensus 99 ~iD~lv~~Ag~ 109 (277)
T 2rhc_B 99 PVDVLVNNAGR 109 (277)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999998873
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.28 E-value=0.012 Score=52.24 Aligned_cols=79 Identities=23% Similarity=0.277 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc---CCcEEecCCCC-Cch-HHHHHHhhcC--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF---GVTEFVNPKDH-DKP-IQQVLVDLTD--GG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~---g~~~vi~~~~~-~~~-~~~~~~~~~~--gg 256 (371)
.|+++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ++ +....+...+. +.+ ....+.+... ++
T Consensus 7 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 85 (280)
T 3tox_A 7 EGKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG 85 (280)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999988 9999999998888999 8999999887655432 32 33322222221 122 2222222211 37
Q ss_pred ccEEEEccC
Q 017431 257 VDYSFECIG 265 (371)
Q Consensus 257 ~dvvid~~g 265 (371)
+|++++++|
T Consensus 86 iD~lvnnAg 94 (280)
T 3tox_A 86 LDTAFNNAG 94 (280)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 999999887
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.27 E-value=0.012 Score=50.84 Aligned_cols=81 Identities=17% Similarity=0.226 Sum_probs=51.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCC--cEE--ecCCCCCc-hHHHHHHhhcC
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGV--TEF--VNPKDHDK-PIQQVLVDLTD 254 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~--~~v--i~~~~~~~-~~~~~~~~~~~ 254 (371)
-+++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+. +.+. ..+ ++....+. .....+.+...
T Consensus 12 l~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~ 90 (247)
T 3i1j_A 12 LKGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEH 90 (247)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHH
Confidence 35789999988 9999999998889999 8999999887655432 2331 122 22211112 22222222211
Q ss_pred --CCccEEEEccCC
Q 017431 255 --GGVDYSFECIGN 266 (371)
Q Consensus 255 --gg~dvvid~~g~ 266 (371)
+++|+++++.|.
T Consensus 91 ~~g~id~lv~nAg~ 104 (247)
T 3i1j_A 91 EFGRLDGLLHNASI 104 (247)
T ss_dssp HHSCCSEEEECCCC
T ss_pred hCCCCCEEEECCcc
Confidence 379999998874
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=96.26 E-value=0.011 Score=51.02 Aligned_cols=79 Identities=23% Similarity=0.330 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h----cCCcE-E--ecCCCCCchHHHHHHhhc--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N----FGVTE-F--VNPKDHDKPIQQVLVDLT--D 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~----~g~~~-v--i~~~~~~~~~~~~~~~~~--~ 254 (371)
+++++||+|+ |.+|.+.++.+...|+ +|+++++++++.+.+. + .+... . .|..+ ...+.+.+.+.. .
T Consensus 6 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 83 (248)
T 2pnf_A 6 QGKVSLVTGSTRGIGRAIAEKLASAGS-TVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLS-EESINKAFEEIYNLV 83 (248)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTC-HHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCC-HHHHHHHHHHHHHhc
Confidence 4688999988 9999999998888999 8999999877654332 1 34322 2 23322 122222332221 2
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|++|+++|.
T Consensus 84 ~~~d~vi~~Ag~ 95 (248)
T 2pnf_A 84 DGIDILVNNAGI 95 (248)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 379999998873
|
| >3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405} | Back alignment and structure |
|---|
Probab=96.26 E-value=0.012 Score=48.90 Aligned_cols=99 Identities=23% Similarity=0.279 Sum_probs=66.6
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----cCC-c--EEecCCCCCchHHHHHHhhc
Q 017431 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGV-T--EFVNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 182 ~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~v~~v~~~~~~~~~~~~----~g~-~--~vi~~~~~~~~~~~~~~~~~ 253 (371)
..++++++||-+|+|. |..+..+++..+ ..+|++++.+++..+.+++ .|. . .++. .+ .. .+....
T Consensus 18 ~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~-~d----~~-~~~~~~ 90 (197)
T 3eey_A 18 MFVKEGDTVVDATCGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIK-DG----HQ-NMDKYI 90 (197)
T ss_dssp HHCCTTCEEEESCCTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEEC-SC----GG-GGGGTC
T ss_pred hcCCCCCEEEEcCCCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEE-CC----HH-HHhhhc
Confidence 4567889999998875 788888888864 2399999999987776654 333 1 2222 22 11 111122
Q ss_pred CCCccEEEEccCC---------------HHHHHHHHHHhccCCceEEEEc
Q 017431 254 DGGVDYSFECIGN---------------VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 254 ~gg~dvvid~~g~---------------~~~~~~~~~~l~~~~G~iv~~g 288 (371)
++.||+|+...+- ...+..+.+.|+++ |+++...
T Consensus 91 ~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~g-G~l~~~~ 139 (197)
T 3eey_A 91 DCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTG-GIITVVI 139 (197)
T ss_dssp CSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred cCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCC-CEEEEEE
Confidence 3479999865422 25689999999997 9988764
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=96.26 E-value=0.02 Score=47.62 Aligned_cols=96 Identities=19% Similarity=0.176 Sum_probs=58.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE-ecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
.+|||+|+ |.+|...++.+...|+ +|+++++++++.+.....+...+ .|..+ . +.+.+... ++|++|++++
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~D~~~--~---~~~~~~~~-~~d~vi~~a~ 76 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPAHVVVGDVLQ--A---ADVDKTVA-GQDAVIVLLG 76 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCSEEEESCTTS--H---HHHHHHHT-TCSEEEECCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeChhhcccccCCceEEEEecCCC--H---HHHHHHHc-CCCEEEECcc
Confidence 68999988 9999999999988998 89999888775432111122211 22222 1 22333222 5899999988
Q ss_pred CHH----------HHHHHHHHhcc-CCceEEEEccC
Q 017431 266 NVS----------VMRAALECCHK-GWGTSVIVGVA 290 (371)
Q Consensus 266 ~~~----------~~~~~~~~l~~-~~G~iv~~g~~ 290 (371)
... ....+++.+.. +.++++.+++.
T Consensus 77 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~ 112 (206)
T 1hdo_A 77 TRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSA 112 (206)
T ss_dssp CTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred CCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeee
Confidence 522 13334444432 22688888654
|
| >2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=96.26 E-value=0.0097 Score=50.75 Aligned_cols=100 Identities=15% Similarity=0.099 Sum_probs=67.2
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcC-----CCeEEEEcCChhhHHHHHhc----C-----C--cEEecCCCCCchHH
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAG-----ASRVIGIDIDPKKFDRAKNF----G-----V--TEFVNPKDHDKPIQ 246 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~g-----~~~v~~v~~~~~~~~~~~~~----g-----~--~~vi~~~~~~~~~~ 246 (371)
.++++++||-+|+|. |..+..+++..+ ..+|++++.+++..+.+++. + . ..++...- ...+.
T Consensus 77 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-~~~~~ 154 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNI-YQVNE 154 (227)
T ss_dssp TSCTTCEEEEESCTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCG-GGCCH
T ss_pred hCCCCCEEEEECCCC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECCh-Hhccc
Confidence 578899999999975 888889998876 22899999999877766542 3 1 12222111 01110
Q ss_pred HHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEE
Q 017431 247 QVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 247 ~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
+... ..+.||+|+........++.+.+.|+++ |+++..
T Consensus 155 ~~~~--~~~~fD~I~~~~~~~~~~~~~~~~Lkpg-G~lv~~ 192 (227)
T 2pbf_A 155 EEKK--ELGLFDAIHVGASASELPEILVDLLAEN-GKLIIP 192 (227)
T ss_dssp HHHH--HHCCEEEEEECSBBSSCCHHHHHHEEEE-EEEEEE
T ss_pred ccCc--cCCCcCEEEECCchHHHHHHHHHhcCCC-cEEEEE
Confidence 0001 1237999998766656678899999997 998766
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=96.26 E-value=0.011 Score=51.31 Aligned_cols=79 Identities=25% Similarity=0.319 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcEE---ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF---VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~v---i~~~~~~~~~~~~~~~~~~--g 255 (371)
+++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +.+.... .|..+ .....+.+.+... +
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 85 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADGGTAISVAVDVSD-PESAKAMADRTLAEFG 85 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTS-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4789999988 9999999999989999 8999999887655432 2243221 23222 1222222222211 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|+++++.|.
T Consensus 86 ~id~li~~Ag~ 96 (253)
T 3qiv_A 86 GIDYLVNNAAI 96 (253)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 79999998874
|
| >3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=96.25 E-value=0.0082 Score=52.92 Aligned_cols=94 Identities=16% Similarity=0.181 Sum_probs=64.0
Q ss_pred ccccchhhhhhhhhcCCCCCCCEEEEEcCC-hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchH
Q 017431 167 LGCGVPTGLGAVWNTAKVEPGSIVAVFGLG-TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPI 245 (371)
Q Consensus 167 ~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag-~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~ 245 (371)
+||+.......|.+..---.|++++|+|+| .+|..+..++...|+ .|+.+.+.. .++
T Consensus 141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~t---------------------~~L 198 (285)
T 3l07_A 141 ESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKA-TVTTCHRFT---------------------TDL 198 (285)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC---------------------SSH
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc---------------------hhH
Confidence 444444444444444444689999999995 489999999999999 787774321 223
Q ss_pred HHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 246 QQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 246 ~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
.+.++ .+|+++.++|.+..+. -++++++ ..+|++|..
T Consensus 199 ~~~~~-----~ADIVI~Avg~p~~I~--~~~vk~G-avVIDvgi~ 235 (285)
T 3l07_A 199 KSHTT-----KADILIVAVGKPNFIT--ADMVKEG-AVVIDVGIN 235 (285)
T ss_dssp HHHHT-----TCSEEEECCCCTTCBC--GGGSCTT-CEEEECCCE
T ss_pred HHhcc-----cCCEEEECCCCCCCCC--HHHcCCC-cEEEEeccc
Confidence 33332 4899999999876432 3557885 888888764
|
| >2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1 | Back alignment and structure |
|---|
Probab=96.25 E-value=0.004 Score=53.26 Aligned_cols=101 Identities=18% Similarity=0.202 Sum_probs=67.7
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----cCCc---EEecCCCCCchHHHHHHhhc
Q 017431 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVT---EFVNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 182 ~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~v~~v~~~~~~~~~~~~----~g~~---~vi~~~~~~~~~~~~~~~~~ 253 (371)
....++++||-+|+| .|..++.+++.++ ..+|++++.+++..+.+++ .|.. .++. .+..+.+.++.
T Consensus 65 ~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~-----~d~~~~~~~~~ 138 (229)
T 2avd_A 65 ARLIQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRL-----KPALETLDELL 138 (229)
T ss_dssp HHHTTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEE-----SCHHHHHHHHH
T ss_pred HHhcCCCEEEEEcCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEE-----cCHHHHHHHHH
Confidence 345678899999987 7888889998764 3499999999988777654 3431 1221 22223333322
Q ss_pred C----CCccEEEEccCC---HHHHHHHHHHhccCCceEEEEcc
Q 017431 254 D----GGVDYSFECIGN---VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 254 ~----gg~dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
. +.||+|+..... ...++.+.+.|+++ |.++....
T Consensus 139 ~~~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pg-G~lv~~~~ 180 (229)
T 2avd_A 139 AAGEAGTFDVAVVDADKENCSAYYERCLQLLRPG-GILAVLRV 180 (229)
T ss_dssp HTTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEE-EEEEEECC
T ss_pred hcCCCCCccEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEECC
Confidence 1 479998854333 35688999999997 99887543
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.25 E-value=0.012 Score=50.52 Aligned_cols=78 Identities=17% Similarity=0.163 Sum_probs=51.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEE--ecCCCCCchHHHHHHhhcC--CCccEE
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF--VNPKDHDKPIQQVLVDLTD--GGVDYS 260 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~v--i~~~~~~~~~~~~~~~~~~--gg~dvv 260 (371)
+++|||+|+ |.+|.+.++.+...|+ +|+++++++++.+.+ ++++.... .|..+ ...+.+.+.+... +++|++
T Consensus 5 ~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~l 82 (234)
T 2ehd_A 5 KGAVLITGASRGIGEATARLLHAKGY-RVGLMARDEKRLQALAAELEGALPLPGDVRE-EGDWARAVAAMEEAFGELSAL 82 (234)
T ss_dssp CCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTC-HHHHHHHHHHHHHHHSCCCEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhhceEEEecCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 578999988 9999999998888999 899998988766543 33432222 23332 1222222322211 379999
Q ss_pred EEccCC
Q 017431 261 FECIGN 266 (371)
Q Consensus 261 id~~g~ 266 (371)
+++.|.
T Consensus 83 i~~Ag~ 88 (234)
T 2ehd_A 83 VNNAGV 88 (234)
T ss_dssp EECCCC
T ss_pred EECCCc
Confidence 999873
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.25 E-value=0.013 Score=51.64 Aligned_cols=79 Identities=20% Similarity=0.309 Sum_probs=52.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHH-HHhcCCcEE---ecCCCCCchHHHHHHhhcC--CCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR-AKNFGVTEF---VNPKDHDKPIQQVLVDLTD--GGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~-~~~~g~~~v---i~~~~~~~~~~~~~~~~~~--gg~d 258 (371)
.++++||+|+ |++|.+.++.+...|+ +|+++++++++.+. .++++.... .|..+ .....+.+.+... +++|
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~id 87 (271)
T 3tzq_B 10 ENKVAIITGACGGIGLETSRVLARAGA-RVVLADLPETDLAGAAASVGRGAVHHVVDLTN-EVSVRALIDFTIDTFGRLD 87 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSCHHHHHHHHCTTCEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCCeEEEECCCCC-HHHHHHHHHHHHHHcCCCC
Confidence 4789999988 9999999998889999 89999988876553 345554322 23333 1222222222221 3799
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
+++++.|.
T Consensus 88 ~lv~nAg~ 95 (271)
T 3tzq_B 88 IVDNNAAH 95 (271)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99998874
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=96.24 E-value=0.009 Score=52.88 Aligned_cols=78 Identities=22% Similarity=0.292 Sum_probs=50.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc---CCcEEe--cCCCCCchHHHHHHhhc--CCC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF---GVTEFV--NPKDHDKPIQQVLVDLT--DGG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~---g~~~vi--~~~~~~~~~~~~~~~~~--~gg 256 (371)
+++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ +++ +-...+ |..+ .....+.+.+.. .++
T Consensus 28 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~ 105 (276)
T 2b4q_A 28 AGRIALVTGGSRGIGQMIAQGLLEAGA-RVFICARDAEACADTATRLSAYGDCQAIPADLSS-EAGARRLAQALGELSAR 105 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTS-HHHHHHHHHHHHHHCSC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCC-HHHHHHHHHHHHHhcCC
Confidence 4689999988 9999999999888999 899999988765433 332 311111 2222 112222222221 247
Q ss_pred ccEEEEccC
Q 017431 257 VDYSFECIG 265 (371)
Q Consensus 257 ~dvvid~~g 265 (371)
+|++++++|
T Consensus 106 iD~lvnnAg 114 (276)
T 2b4q_A 106 LDILVNNAG 114 (276)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 999999887
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.23 E-value=0.0099 Score=52.13 Aligned_cols=79 Identities=22% Similarity=0.221 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcC-CcE-E--ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFG-VTE-F--VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g-~~~-v--i~~~~~~~~~~~~~~~~~~-- 254 (371)
.|+++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++.+ ... . .|..+ .....+.+.+...
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 86 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSD-RAQCDALAGRAVEEF 86 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCC-HHHHHHHHHHHHHHh
Confidence 5789999987 9999999998889999 899999988765433 2333 111 2 23322 1222222222221
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|+++++.|.
T Consensus 87 g~id~lvnnAg~ 98 (262)
T 3pk0_A 87 GGIDVVCANAGV 98 (262)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 379999999883
|
| >1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 | Back alignment and structure |
|---|
Probab=96.23 E-value=0.0091 Score=55.00 Aligned_cols=48 Identities=25% Similarity=0.376 Sum_probs=41.2
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCC
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGV 232 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~g~ 232 (371)
--+|++|+|+|.|.+|..+++.+...|+ +|++.+++.++.+ +++++++
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L~~~Ga-kVvv~D~~~~~l~~~a~~~ga 218 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGA 218 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCC
T ss_pred CCCcCEEEEECchHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCC
Confidence 3578999999999999999999999999 8889998888766 5556665
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=96.23 E-value=0.015 Score=48.58 Aligned_cols=62 Identities=26% Similarity=0.322 Sum_probs=42.5
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 189 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 189 ~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
+|||+|+ |.+|.+.++.+. .|+ +|++++++++ ....|..+ ...+.+.+.+. +++|++++++|
T Consensus 5 ~vlVtGasg~iG~~~~~~l~-~g~-~V~~~~r~~~----------~~~~D~~~-~~~~~~~~~~~--~~~d~vi~~ag 67 (202)
T 3d7l_A 5 KILLIGASGTLGSAVKERLE-KKA-EVITAGRHSG----------DVTVDITN-IDSIKKMYEQV--GKVDAIVSATG 67 (202)
T ss_dssp EEEEETTTSHHHHHHHHHHT-TTS-EEEEEESSSS----------SEECCTTC-HHHHHHHHHHH--CCEEEEEECCC
T ss_pred EEEEEcCCcHHHHHHHHHHH-CCC-eEEEEecCcc----------ceeeecCC-HHHHHHHHHHh--CCCCEEEECCC
Confidence 7999988 999999888888 899 8998887754 12233333 12233333333 46899999887
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=96.23 E-value=0.013 Score=51.38 Aligned_cols=79 Identities=16% Similarity=0.193 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCc-EE--ecCCCCCchHHHHHHhhcC--CCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVT-EF--VNPKDHDKPIQQVLVDLTD--GGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~-~v--i~~~~~~~~~~~~~~~~~~--gg~d 258 (371)
.++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ +++... .. .|..+ .....+.+.+... +++|
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~iD 83 (260)
T 1nff_A 6 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQ-PAQWKAAVDTAVTAFGGLH 83 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhcCceEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence 4689999988 9999999998888999 899998888765543 333321 11 23332 1222233332221 3799
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
++++++|.
T Consensus 84 ~lv~~Ag~ 91 (260)
T 1nff_A 84 VLVNNAGI 91 (260)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99998873
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=96.22 E-value=0.0076 Score=52.35 Aligned_cols=75 Identities=21% Similarity=0.224 Sum_probs=48.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcC--CCccEEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTD--GGVDYSFE 262 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~--gg~dvvid 262 (371)
.++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. + ...|..+ .....+.+.+... +++|++++
T Consensus 14 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~--~--~~~D~~~-~~~~~~~~~~~~~~~g~id~lv~ 87 (247)
T 1uzm_A 14 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLF--G--VEVDVTD-SDAVDRAFTAVEEHQGPVEVLVS 87 (247)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSE--E--EECCTTC-HHHHHHHHHHHHHHHSSCSEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHhc--C--eeccCCC-HHHHHHHHHHHHHHcCCCCEEEE
Confidence 4689999988 9999999998888999 8999888766433221 1 2233333 1222222322211 36899999
Q ss_pred ccCC
Q 017431 263 CIGN 266 (371)
Q Consensus 263 ~~g~ 266 (371)
+.|.
T Consensus 88 ~Ag~ 91 (247)
T 1uzm_A 88 NAGL 91 (247)
T ss_dssp ECSC
T ss_pred CCCC
Confidence 8874
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=96.22 E-value=0.028 Score=50.57 Aligned_cols=75 Identities=16% Similarity=0.147 Sum_probs=50.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC---hhhHH-HHHhc----CCc-EEecCCCCCchH-HHHHHhhcC
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID---PKKFD-RAKNF----GVT-EFVNPKDHDKPI-QQVLVDLTD 254 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~---~~~~~-~~~~~----g~~-~vi~~~~~~~~~-~~~~~~~~~ 254 (371)
-.++++||+|+|++|.+++..+...|+++|+++.++ .++.+ +++++ +.. ..+...+ ..+ .+.+.
T Consensus 146 l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~--l~~~~~~l~---- 219 (312)
T 3t4e_A 146 MRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLAD--QHAFTEALA---- 219 (312)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTC--HHHHHHHHH----
T ss_pred cCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHh--hhhhHhhcc----
Confidence 368899999999999999999999999889999998 54443 23333 221 1232222 111 12222
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
.+|+|++|++.
T Consensus 220 -~~DiIINaTp~ 230 (312)
T 3t4e_A 220 -SADILTNGTKV 230 (312)
T ss_dssp -HCSEEEECSST
T ss_pred -CceEEEECCcC
Confidence 48999999875
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.22 E-value=0.013 Score=51.67 Aligned_cols=79 Identities=19% Similarity=0.237 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcE-E--ecCCCCCchHHHHHHhhc--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLT--DG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~~~~~~--~g 255 (371)
.+++|||+|+ |.+|.+.+..+...|+ +|+++++++++.+.+ ++.+... . .|..+ .....+.+.+.. .+
T Consensus 30 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g 107 (272)
T 1yb1_A 30 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSN-REDIYSSAKKVKAEIG 107 (272)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHTC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCC-HHHHHHHHHHHHHHCC
Confidence 4689999988 9999999999988999 899999888765432 2234322 2 23322 122222232221 23
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|++++++|.
T Consensus 108 ~iD~li~~Ag~ 118 (272)
T 1yb1_A 108 DVSILVNNAGV 118 (272)
T ss_dssp CCSEEEECCCC
T ss_pred CCcEEEECCCc
Confidence 79999999874
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.20 E-value=0.013 Score=50.69 Aligned_cols=79 Identities=22% Similarity=0.315 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhc--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~--~g 255 (371)
.++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ ++.+.... .|..+ .....+.+.+.. .+
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 81 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKGFKARGLVLNISD-IESIQNFFAEIKAENL 81 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcC
Confidence 4689999988 9999999888888999 899999988765433 23344322 23322 122223333322 23
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|++++++|.
T Consensus 82 ~id~li~~Ag~ 92 (247)
T 3lyl_A 82 AIDILVNNAGI 92 (247)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999874
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=96.20 E-value=0.046 Score=48.97 Aligned_cols=74 Identities=24% Similarity=0.363 Sum_probs=54.8
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEe-cCCCCCchHHHHHHhhcCCCccEEEEccCC
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NPKDHDKPIQQVLVDLTDGGVDYSFECIGN 266 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi-~~~~~~~~~~~~~~~~~~gg~dvvid~~g~ 266 (371)
.+|.|+|+|.+|......+...|. .|++.++++++.+.+.+.|..... +..+ .+ ...|+||-|+..
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~~~~~e-------~~-----~~aDvvi~~vp~ 74 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAEGACGAAASARE-------FA-----GVVDALVILVVN 74 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEESSSTT-------TT-----TTCSEEEECCSS
T ss_pred CeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCCccccCCHHH-------HH-----hcCCEEEEECCC
Confidence 579999999999998888888899 899999999998888887775412 1111 00 147888888887
Q ss_pred HHHHHHHH
Q 017431 267 VSVMRAAL 274 (371)
Q Consensus 267 ~~~~~~~~ 274 (371)
+..++..+
T Consensus 75 ~~~~~~v~ 82 (303)
T 3g0o_A 75 AAQVRQVL 82 (303)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55455554
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=96.19 E-value=0.012 Score=51.36 Aligned_cols=78 Identities=27% Similarity=0.406 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCcEE---ecCCCCCchHHHHHHhhcC--CCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTEF---VNPKDHDKPIQQVLVDLTD--GGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~g~~~v---i~~~~~~~~~~~~~~~~~~--gg~d 258 (371)
+++++||+|+ |.+|.+.++.+...|+ +|++++++.++.+ ..++++.... .|..+ .....+.+.+... +++|
T Consensus 11 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~id 88 (265)
T 2o23_A 11 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNNCVFAPADVTS-EKDVQTALALAKGKFGRVD 88 (265)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTTEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcHhHHHHHHHhCCceEEEEcCCCC-HHHHHHHHHHHHHHCCCCC
Confidence 4689999988 9999999999989999 8999888876554 3344554322 23322 1223333332211 3799
Q ss_pred EEEEccC
Q 017431 259 YSFECIG 265 (371)
Q Consensus 259 vvid~~g 265 (371)
++++++|
T Consensus 89 ~li~~Ag 95 (265)
T 2o23_A 89 VAVNCAG 95 (265)
T ss_dssp EEEECCC
T ss_pred EEEECCc
Confidence 9999887
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.19 E-value=0.0083 Score=53.16 Aligned_cols=78 Identities=17% Similarity=0.197 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh---cCC---cE-E--ecCCCCCchHHHHHHhhcC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN---FGV---TE-F--VNPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~---~g~---~~-v--i~~~~~~~~~~~~~~~~~~ 254 (371)
+++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++ .+. .. . .|..+ .....+.+.+...
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~ 82 (280)
T 1xkq_A 5 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT-EDGQDQIINSTLK 82 (280)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCC-HHHHHHHHHHHHH
Confidence 4689999988 9999999998888999 899999988765433 22 232 11 2 23333 1222222322211
Q ss_pred --CCccEEEEccC
Q 017431 255 --GGVDYSFECIG 265 (371)
Q Consensus 255 --gg~dvvid~~g 265 (371)
+++|++++++|
T Consensus 83 ~~g~iD~lv~nAg 95 (280)
T 1xkq_A 83 QFGKIDVLVNNAG 95 (280)
T ss_dssp HHSCCCEEEECCC
T ss_pred hcCCCCEEEECCC
Confidence 36999999887
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=96.19 E-value=0.029 Score=49.15 Aligned_cols=100 Identities=17% Similarity=0.085 Sum_probs=61.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhc--CCCccEEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT--DGGVDYSFE 262 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~--~gg~dvvid 262 (371)
+|+++||+|+ +++|.+.++.+...|+ +|+.++++++.. ..+.+ ....|..+ .......+.+.. -|++|++++
T Consensus 10 ~GK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~-~~~~~--~~~~Dv~~-~~~v~~~~~~~~~~~G~iDilVn 84 (261)
T 4h15_A 10 RGKRALITAGTKGAGAATVSLFLELGA-QVLTTARARPEG-LPEEL--FVEADLTT-KEGCAIVAEATRQRLGGVDVIVH 84 (261)
T ss_dssp TTCEEEESCCSSHHHHHHHHHHHHTTC-EEEEEESSCCTT-SCTTT--EEECCTTS-HHHHHHHHHHHHHHTSSCSEEEE
T ss_pred CCCEEEEeccCcHHHHHHHHHHHHcCC-EEEEEECCchhC-CCcEE--EEEcCCCC-HHHHHHHHHHHHHHcCCCCEEEE
Confidence 6899999988 8999999999999999 899988865421 11111 11223332 122222222221 247999999
Q ss_pred ccCCH---------------------------HHHHHHHHHhc-cCCceEEEEccC
Q 017431 263 CIGNV---------------------------SVMRAALECCH-KGWGTSVIVGVA 290 (371)
Q Consensus 263 ~~g~~---------------------------~~~~~~~~~l~-~~~G~iv~~g~~ 290 (371)
+.|.. ...+.++..|. .++|+||.+++.
T Consensus 85 nAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~ 140 (261)
T 4h15_A 85 MLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSI 140 (261)
T ss_dssp CCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred CCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEeh
Confidence 87630 12445555553 224899999764
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=96.18 E-value=0.014 Score=50.60 Aligned_cols=79 Identities=25% Similarity=0.371 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcE--E--ecCCCCCchHHHHHHhhc-CCCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE--F--VNPKDHDKPIQQVLVDLT-DGGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~--v--i~~~~~~~~~~~~~~~~~-~gg~d 258 (371)
.++++||+|+ |.+|.+.++.+...|+ +|+++++++++.+.+ ++++... . .|..+ .....+.+.+.. .+++|
T Consensus 10 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~id 87 (254)
T 2wsb_A 10 DGACAAVTGAGSGIGLEICRAFAASGA-RLILIDREAAALDRAAQELGAAVAARIVADVTD-AEAMTAAAAEAEAVAPVS 87 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEEECCTTC-HHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceeEEEEecCC-HHHHHHHHHHHHhhCCCc
Confidence 4689999988 9999999998888999 899999988765533 3444322 1 23332 122222222211 14799
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
++++++|.
T Consensus 88 ~li~~Ag~ 95 (254)
T 2wsb_A 88 ILVNSAGI 95 (254)
T ss_dssp EEEECCCC
T ss_pred EEEECCcc
Confidence 99998873
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=96.18 E-value=0.035 Score=48.01 Aligned_cols=79 Identities=20% Similarity=0.235 Sum_probs=48.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHH----HHhcCCcEE---ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDR----AKNFGVTEF---VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~-~~~~~~~----~~~~g~~~v---i~~~~~~~~~~~~~~~~~~-- 254 (371)
.++++||+|+ |++|.+.++.+...|+ +|+++++ ++++.+. +++.+.... .|..+ .....+.+.+...
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 80 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGY-NVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVAD-ADEVKAMIKEVVSQF 80 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHc
Confidence 4678999988 9999999998889999 7777655 4444332 233444332 22222 1222222322221
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|+++++.|.
T Consensus 81 g~id~lv~nAg~ 92 (246)
T 3osu_A 81 GSLDVLVNNAGI 92 (246)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 379999998874
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=96.18 E-value=0.018 Score=50.08 Aligned_cols=78 Identities=27% Similarity=0.397 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcE-E--ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~~~~~~~--g 255 (371)
.+++|||+|+ |.+|.+.++.+...|+ +|+++++++++.+.+ ++.+... . .|..+ .....+.+.+... +
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 89 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTN-TESVQNAVRSVHEQEG 89 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcC
Confidence 4689999988 9999999998888999 899998887654322 2234322 2 23322 1222233332211 3
Q ss_pred CccEEEEccC
Q 017431 256 GVDYSFECIG 265 (371)
Q Consensus 256 g~dvvid~~g 265 (371)
++|++++++|
T Consensus 90 ~id~vi~~Ag 99 (260)
T 3awd_A 90 RVDILVACAG 99 (260)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999999887
|
| >3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium} | Back alignment and structure |
|---|
Probab=96.17 E-value=0.04 Score=46.96 Aligned_cols=93 Identities=16% Similarity=0.126 Sum_probs=59.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-hH-HHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-KF-DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~-~~-~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
.|++|||+|+|.+|...++.+...|+ +|++++.... .. +++.+.+. ..+ ...+... .+ .++|+||-+
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA-~VtVvap~~~~~l~~l~~~~~i-~~i-~~~~~~~------dL--~~adLVIaA 98 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGA-AITVVAPTVSAEINEWEAKGQL-RVK-RKKVGEE------DL--LNVFFIVVA 98 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCC-CEEEECSSCCHHHHHHHHTTSC-EEE-CSCCCGG------GS--SSCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCCCHHHHHHHHcCCc-EEE-ECCCCHh------Hh--CCCCEEEEC
Confidence 46899999999999999999999999 7888865432 22 33333333 222 2221111 11 279999999
Q ss_pred cCCHHHHHHHHHHhccCCceEEEEccCC
Q 017431 264 IGNVSVMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 264 ~g~~~~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
++.+. .+..+...+.. |..|...+..
T Consensus 99 T~d~~-~N~~I~~~ak~-gi~VNvvD~p 124 (223)
T 3dfz_A 99 TNDQA-VNKFVKQHIKN-DQLVNMASSF 124 (223)
T ss_dssp CCCTH-HHHHHHHHSCT-TCEEEC----
T ss_pred CCCHH-HHHHHHHHHhC-CCEEEEeCCc
Confidence 99976 55555555664 8887765543
|
| >1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A | Back alignment and structure |
|---|
Probab=96.17 E-value=0.0084 Score=51.42 Aligned_cols=102 Identities=16% Similarity=0.181 Sum_probs=67.7
Q ss_pred hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC--c--EEecCCCCCchHHHHHHhhcCC
Q 017431 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV--T--EFVNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~--~--~vi~~~~~~~~~~~~~~~~~~g 255 (371)
....+.++++||-+|+|. |..+..+++..|..+|++++.+++..+.+++... . ..+........ ..... .+
T Consensus 68 ~~~~~~~~~~VLDlGcG~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~---~~~~~-~~ 142 (230)
T 1fbn_A 68 KVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQ---EYANI-VE 142 (230)
T ss_dssp CCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGG---GGTTT-SC
T ss_pred cccCCCCCCEEEEEcccC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcc---ccccc-Cc
Confidence 445677899999999975 8888899998875599999999987776654321 1 11211110000 00011 13
Q ss_pred CccEEEEccCCH----HHHHHHHHHhccCCceEEEE
Q 017431 256 GVDYSFECIGNV----SVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 256 g~dvvid~~g~~----~~~~~~~~~l~~~~G~iv~~ 287 (371)
.+|+|+.....+ ..++.+.+.|+++ |+++..
T Consensus 143 ~~D~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~ 177 (230)
T 1fbn_A 143 KVDVIYEDVAQPNQAEILIKNAKWFLKKG-GYGMIA 177 (230)
T ss_dssp CEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred cEEEEEEecCChhHHHHHHHHHHHhCCCC-cEEEEE
Confidence 799999765554 3488889999997 998875
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=96.17 E-value=0.011 Score=52.32 Aligned_cols=79 Identities=28% Similarity=0.341 Sum_probs=52.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEE---ecCCCCCchHHHHHHhhcC--CCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF---VNPKDHDKPIQQVLVDLTD--GGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~v---i~~~~~~~~~~~~~~~~~~--gg~d 258 (371)
.++++||+|+ |.+|.+.++.+...|+ +|++++++.++.+.+ .+++.... .|..+ .......+.+... +++|
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g~id 81 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAAGD-TVIGTARRTEALDDLVAAYPDRAEAISLDVTD-GERIDVVAADVLARYGRVD 81 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHCTTTEEEEECCTTC-HHHHHHHHHHHHHHHSCCS
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCceEEEeeCCC-HHHHHHHHHHHHHhCCCCC
Confidence 4689999988 9999999999889999 899999988776544 44543222 23322 1222222322221 3799
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
++++++|.
T Consensus 82 ~lv~~Ag~ 89 (281)
T 3m1a_A 82 VLVNNAGR 89 (281)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 99999884
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.17 E-value=0.012 Score=51.44 Aligned_cols=79 Identities=24% Similarity=0.404 Sum_probs=46.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHH-HHhcCCcE-E--ecCCCCCchHHHHHHhhcC--CCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR-AKNFGVTE-F--VNPKDHDKPIQQVLVDLTD--GGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~-~~~~g~~~-v--i~~~~~~~~~~~~~~~~~~--gg~d 258 (371)
+++++||+|+ +++|.+.++.+...|+ +|+++++++++.+. .++++... . .|..+ .....+.+.+... +++|
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~id 83 (257)
T 3tpc_A 6 KSRVFIVTGASSGLGAAVTRMLAQEGA-TVLGLDLKPPAGEEPAAELGAAVRFRNADVTN-EADATAALAFAKQEFGHVH 83 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSCC------------CEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence 5789999988 9999999998889999 89999888776543 33444322 1 23322 1222222322221 3799
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
++++++|.
T Consensus 84 ~lv~nAg~ 91 (257)
T 3tpc_A 84 GLVNCAGT 91 (257)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99998873
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.16 E-value=0.014 Score=51.85 Aligned_cols=79 Identities=19% Similarity=0.292 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc---CCcEE---ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF---GVTEF---VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~---g~~~v---i~~~~~~~~~~~~~~~~~~--g 255 (371)
+++++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+. ++ +.... .|..+ .....+.+.+... +
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 104 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAGGQAIALEADVSD-ELQMRNAVRDLVLKFG 104 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 5689999988 9999999998888999 8999999887655432 32 33222 23322 1222222332221 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|++++++|.
T Consensus 105 ~iD~lVnnAg~ 115 (283)
T 3v8b_A 105 HLDIVVANAGI 115 (283)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999998874
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.15 E-value=0.043 Score=48.93 Aligned_cols=86 Identities=16% Similarity=0.243 Sum_probs=61.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHH
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 268 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~ 268 (371)
+|.|+|+|.+|...+..+...|. +|++.++++++.+.+++.|... . .+..+.+. .+|+|+.|+..+.
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~----~~~~~~~~-----~~D~vi~~v~~~~ 73 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAET---A----STAKAIAE-----QCDVIITMLPNSP 73 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE---C----SSHHHHHH-----HCSEEEECCSSHH
T ss_pred eEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCee---c----CCHHHHHh-----CCCEEEEECCCHH
Confidence 79999999999998888888898 8999999998888777766521 1 12333332 3899999998755
Q ss_pred HHHHHH-------HHhccCCceEEEEc
Q 017431 269 VMRAAL-------ECCHKGWGTSVIVG 288 (371)
Q Consensus 269 ~~~~~~-------~~l~~~~G~iv~~g 288 (371)
.++..+ ..+.++ ..++.++
T Consensus 74 ~~~~~~~~~~~l~~~l~~~-~~vv~~s 99 (299)
T 1vpd_A 74 HVKEVALGENGIIEGAKPG-TVLIDMS 99 (299)
T ss_dssp HHHHHHHSTTCHHHHCCTT-CEEEECS
T ss_pred HHHHHHhCcchHhhcCCCC-CEEEECC
Confidence 455554 455664 6666554
|
| >2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A* | Back alignment and structure |
|---|
Probab=96.15 E-value=0.027 Score=51.35 Aligned_cols=89 Identities=19% Similarity=0.332 Sum_probs=63.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
-.|.+|.|+|.|.+|...++.++..|. +|++.+++.++ +.+.++|... . ++.+.+. ..|+|+.++
T Consensus 148 l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~----~----~l~~~l~-----~aDvVil~v 212 (334)
T 2dbq_A 148 VYGKTIGIIGLGRIGQAIAKRAKGFNM-RILYYSRTRKE-EVERELNAEF----K----PLEDLLR-----ESDFVVLAV 212 (334)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHHCCEE----C----CHHHHHH-----HCSEEEECC
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCCC-EEEEECCCcch-hhHhhcCccc----C----CHHHHHh-----hCCEEEECC
Confidence 467899999999999999999999999 89999998877 5556666521 1 2333332 378888887
Q ss_pred CCHH----HH-HHHHHHhccCCceEEEEcc
Q 017431 265 GNVS----VM-RAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 265 g~~~----~~-~~~~~~l~~~~G~iv~~g~ 289 (371)
.... .+ ...+..|+++ ..++.++.
T Consensus 213 p~~~~t~~~i~~~~~~~mk~~-ailIn~sr 241 (334)
T 2dbq_A 213 PLTRETYHLINEERLKLMKKT-AILINIAR 241 (334)
T ss_dssp CCCTTTTTCBCHHHHHHSCTT-CEEEECSC
T ss_pred CCChHHHHhhCHHHHhcCCCC-cEEEECCC
Confidence 6532 22 3556778885 77776653
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=96.15 E-value=0.013 Score=51.83 Aligned_cols=79 Identities=22% Similarity=0.282 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~~--g 255 (371)
.++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+ ++.+.... .|..+ .....+.+.+... +
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 100 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTS-TDEVHAAVAAAVERFG 100 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTC-HHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 5789999988 9999999988888899 899999988765433 23343322 23332 1222222322221 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|++++++|.
T Consensus 101 ~id~lv~nAg~ 111 (279)
T 3sju_A 101 PIGILVNSAGR 111 (279)
T ss_dssp SCCEEEECCCC
T ss_pred CCcEEEECCCC
Confidence 79999998874
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=96.13 E-value=0.011 Score=51.57 Aligned_cols=79 Identities=22% Similarity=0.310 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~~--g 255 (371)
.|+++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++.+.... .|..+ .....+.+.+... +
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 88 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTD-EQHREAVIKAALDQFG 88 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 5789999988 9999998888888899 899999988765433 23344322 23322 1222222222221 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|+++++.|.
T Consensus 89 ~id~lv~nAg~ 99 (256)
T 3gaf_A 89 KITVLVNNAGG 99 (256)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999998874
|
| >4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} | Back alignment and structure |
|---|
Probab=96.12 E-value=0.011 Score=52.59 Aligned_cols=96 Identities=20% Similarity=0.201 Sum_probs=64.1
Q ss_pred ccccchhhhhhhhhcCCCCCCCEEEEEcCC-hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchH
Q 017431 167 LGCGVPTGLGAVWNTAKVEPGSIVAVFGLG-TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPI 245 (371)
Q Consensus 167 ~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag-~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~ 245 (371)
+||+.......|.+..---.|++++|+|+| .+|..+..++...|+ .|+.+.+.....+ .
T Consensus 145 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~~~~T~~l~-------------------l 204 (300)
T 4a26_A 145 TPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENA-TVTIVHSGTSTED-------------------M 204 (300)
T ss_dssp CCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTSCHHH-------------------H
T ss_pred CCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCCCCch-------------------h
Confidence 444444444444444445689999999985 589999999999999 7888865322111 0
Q ss_pred HHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 246 QQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 246 ~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
.+.++ .+|+++.++|.+..+.. .+++++ ..+|++|..
T Consensus 205 ~~~~~-----~ADIVI~Avg~p~~I~~--~~vk~G-avVIDvgi~ 241 (300)
T 4a26_A 205 IDYLR-----TADIVIAAMGQPGYVKG--EWIKEG-AAVVDVGTT 241 (300)
T ss_dssp HHHHH-----TCSEEEECSCCTTCBCG--GGSCTT-CEEEECCCE
T ss_pred hhhhc-----cCCEEEECCCCCCCCcH--HhcCCC-cEEEEEecc
Confidence 02222 48999999998764432 457886 888888764
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=96.12 E-value=0.052 Score=49.09 Aligned_cols=89 Identities=17% Similarity=0.220 Sum_probs=62.8
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCC
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 266 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~ 266 (371)
..+|.|+|+|.+|...++.+...|. .|++.++++++.+.+.+.|+.. . .+..+.+. ..|+||-|+..
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~-~------~~~~e~~~-----~aDvVi~~vp~ 97 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRTPARAASLAALGATI-H------EQARAAAR-----DADIVVSMLEN 97 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCEE-E------SSHHHHHT-----TCSEEEECCSS
T ss_pred CCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHCCCEe-e------CCHHHHHh-----cCCEEEEECCC
Confidence 3589999999999998888888899 8999999999988887777532 1 12222221 47899998887
Q ss_pred HHHHHHHH------HHhccCCceEEEEcc
Q 017431 267 VSVMRAAL------ECCHKGWGTSVIVGV 289 (371)
Q Consensus 267 ~~~~~~~~------~~l~~~~G~iv~~g~ 289 (371)
+..++..+ ..+.++ ..++..+.
T Consensus 98 ~~~~~~v~~~~~~~~~l~~~-~~vi~~st 125 (320)
T 4dll_A 98 GAVVQDVLFAQGVAAAMKPG-SLFLDMAS 125 (320)
T ss_dssp HHHHHHHHTTTCHHHHCCTT-CEEEECSC
T ss_pred HHHHHHHHcchhHHhhCCCC-CEEEecCC
Confidence 55455444 245564 55655543
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.12 E-value=0.048 Score=49.06 Aligned_cols=74 Identities=18% Similarity=0.239 Sum_probs=55.4
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCH
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 267 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~ 267 (371)
.+|.|+|+|.+|....+.+...|. .|++.++++++.+.+.+.|+.. . .+..+.+. ..|+||-|++.+
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~---~----~~~~~~~~-----~aDvvi~~vp~~ 88 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTLSKCDELVEHGASV---C----ESPAEVIK-----KCKYTIAMLSDP 88 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEE---C----SSHHHHHH-----HCSEEEECCSSH
T ss_pred CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCeE---c----CCHHHHHH-----hCCEEEEEcCCH
Confidence 579999999999998888888999 8999999999988888877632 1 22333332 378888888775
Q ss_pred HHHHHHH
Q 017431 268 SVMRAAL 274 (371)
Q Consensus 268 ~~~~~~~ 274 (371)
..++..+
T Consensus 89 ~~~~~v~ 95 (310)
T 3doj_A 89 CAALSVV 95 (310)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5455554
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=96.09 E-value=0.015 Score=50.97 Aligned_cols=79 Identities=15% Similarity=0.182 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcE-E--ecCCCCCchHHHHHH---hhcC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLV---DLTD 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~~~---~~~~ 254 (371)
++++|||+|+ |.+|.+.++.+...|+ +|+++++++++.+.+ ++.+... . .|..+ .....+.+. +..+
T Consensus 13 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 90 (266)
T 1xq1_A 13 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASL-RPEREKLMQTVSSMFG 90 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence 4689999988 9999999999888999 899998887765432 2234322 1 22222 112222222 2222
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|++++++|.
T Consensus 91 ~~id~li~~Ag~ 102 (266)
T 1xq1_A 91 GKLDILINNLGA 102 (266)
T ss_dssp TCCSEEEEECCC
T ss_pred CCCcEEEECCCC
Confidence 579999998874
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=96.09 E-value=0.011 Score=51.19 Aligned_cols=75 Identities=15% Similarity=0.052 Sum_probs=50.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-c--CChhhHHHH-Hhc-CCcEEecCCCCCchHHHHHHhhcCCCccEE
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-D--IDPKKFDRA-KNF-GVTEFVNPKDHDKPIQQVLVDLTDGGVDYS 260 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v-~--~~~~~~~~~-~~~-g~~~vi~~~~~~~~~~~~~~~~~~gg~dvv 260 (371)
++++||+|+ |++|.+.++.+...|+ +|+++ + +++++.+.+ +++ +. .+.+..+. ..+.+.+.+.. +++|++
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~v-~~~~~~~~~~~-g~iD~l 76 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGY-TVVCHDASFADAAERQRFESENPGT-IALAEQKP-ERLVDATLQHG-EAIDTI 76 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHSTTE-EECCCCCG-GGHHHHHGGGS-SCEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCcCCHHHHHHHHHHhCCC-cccCHHHH-HHHHHHHHHHc-CCCCEE
Confidence 468999988 9999999999989999 89988 6 777766543 344 32 23333332 23333333332 379999
Q ss_pred EEccC
Q 017431 261 FECIG 265 (371)
Q Consensus 261 id~~g 265 (371)
++++|
T Consensus 77 v~~Ag 81 (244)
T 1zmo_A 77 VSNDY 81 (244)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 99887
|
| >3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=96.08 E-value=0.012 Score=52.30 Aligned_cols=88 Identities=20% Similarity=0.188 Sum_probs=58.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
..++++||+|+|++|.+++..+...|+++|+++.++.++.+.+. ++. .+ .+. .+.++ .+|+|++|
T Consensus 120 ~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~---~~-------~~~-~l~~l---~~DivIna 185 (282)
T 3fbt_A 120 IKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFK---VI-------SYD-ELSNL---KGDVIINC 185 (282)
T ss_dssp CTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSE---EE-------EHH-HHTTC---CCSEEEEC
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcC---cc-------cHH-HHHhc---cCCEEEEC
Confidence 46889999999999999999999999988999999988765443 332 11 122 22232 69999999
Q ss_pred cCCH---HH--HHHHHHHhccCCceEEEE
Q 017431 264 IGNV---SV--MRAALECCHKGWGTSVIV 287 (371)
Q Consensus 264 ~g~~---~~--~~~~~~~l~~~~G~iv~~ 287 (371)
++.. .. .......+.++ ..++++
T Consensus 186 Tp~Gm~~~~~~~pi~~~~l~~~-~~v~Dl 213 (282)
T 3fbt_A 186 TPKGMYPKEGESPVDKEVVAKF-SSAVDL 213 (282)
T ss_dssp SSTTSTTSTTCCSSCHHHHTTC-SEEEES
T ss_pred CccCccCCCccCCCCHHHcCCC-CEEEEE
Confidence 8641 10 11234456664 555555
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=96.08 E-value=0.035 Score=49.06 Aligned_cols=96 Identities=13% Similarity=0.065 Sum_probs=61.9
Q ss_pred EEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhcCCcEE-ecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 189 IVAVFGL-GTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 189 ~VlI~Ga-g~vG~~ai~la~~~-g~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
+|||+|+ |.+|...++.+... |. +|+++++++++.+.+...+...+ .|..+ . +.+.+... ++|+||++++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~-~V~~~~R~~~~~~~~~~~~v~~~~~D~~d--~---~~l~~~~~-~~d~vi~~a~ 74 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHID-HFHIGVRNVEKVPDDWRGKVSVRQLDYFN--Q---ESMVEAFK-GMDTVVFIPS 74 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCT-TEEEEESSGGGSCGGGBTTBEEEECCTTC--H---HHHHHHTT-TCSEEEECCC
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCC-cEEEEECCHHHHHHhhhCCCEEEEcCCCC--H---HHHHHHHh-CCCEEEEeCC
Confidence 5899988 99999999888877 88 88898888876544444444322 23332 2 23333332 7999999987
Q ss_pred CH-------HHHHHHHHHhccC-CceEEEEccCC
Q 017431 266 NV-------SVMRAALECCHKG-WGTSVIVGVAA 291 (371)
Q Consensus 266 ~~-------~~~~~~~~~l~~~-~G~iv~~g~~~ 291 (371)
.. .....+++.+... -+++|.++...
T Consensus 75 ~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~ 108 (289)
T 3e48_A 75 IIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA 108 (289)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred CCccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence 51 2234555555543 24788887653
|
| >1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A* | Back alignment and structure |
|---|
Probab=96.05 E-value=0.01 Score=52.70 Aligned_cols=95 Identities=16% Similarity=0.154 Sum_probs=64.5
Q ss_pred hccccchhhhhhhhhcCCCCCCCEEEEEcCC-hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCch
Q 017431 166 LLGCGVPTGLGAVWNTAKVEPGSIVAVFGLG-TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKP 244 (371)
Q Consensus 166 ~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag-~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~ 244 (371)
.+||+.......|.+..---.|++|+|+|+| .+|.-+.+++...|+ .|+.+.+.. .+
T Consensus 144 ~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~t---------------------~~ 201 (301)
T 1a4i_A 144 FIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNA-TVTTCHSKT---------------------AH 201 (301)
T ss_dssp CCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC---------------------SS
T ss_pred ccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCC-eEEEEECCc---------------------cc
Confidence 3444444334434333334589999999997 689999999999999 788774321 23
Q ss_pred HHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 245 IQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 245 ~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+.+.++ .+|+++.++|.+..+. -++++++ ..+|++|..
T Consensus 202 L~~~~~-----~ADIVI~Avg~p~~I~--~~~vk~G-avVIDVgi~ 239 (301)
T 1a4i_A 202 LDEEVN-----KGDILVVATGQPEMVK--GEWIKPG-AIVIDCGIN 239 (301)
T ss_dssp HHHHHT-----TCSEEEECCCCTTCBC--GGGSCTT-CEEEECCCB
T ss_pred HHHHhc-----cCCEEEECCCCcccCC--HHHcCCC-cEEEEccCC
Confidence 333332 4999999999976432 3447786 899999874
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=96.05 E-value=0.037 Score=48.99 Aligned_cols=78 Identities=21% Similarity=0.284 Sum_probs=48.4
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChh---hHHHH-HhcCCcEE--ecCCCCCchHHHHHHhhc--C
Q 017431 186 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPK---KFDRA-KNFGVTEF--VNPKDHDKPIQQVLVDLT--D 254 (371)
Q Consensus 186 ~g~~VlI~Ga---g~vG~~ai~la~~~g~~~v~~v~~~~~---~~~~~-~~~g~~~v--i~~~~~~~~~~~~~~~~~--~ 254 (371)
.++++||+|+ |++|.+.++.+...|+ +|++++++++ ..+.+ .+.+.... .|..+ .....+.+.+.. -
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~ 97 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGA-QLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSL-DEDIKNLKKFLEENW 97 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTC-HHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4789999976 5899999988888899 8999888765 22222 22342222 23333 122222222221 2
Q ss_pred CCccEEEEccC
Q 017431 255 GGVDYSFECIG 265 (371)
Q Consensus 255 gg~dvvid~~g 265 (371)
+++|++++++|
T Consensus 98 g~iD~lv~~Ag 108 (285)
T 2p91_A 98 GSLDIIVHSIA 108 (285)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47999999887
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=96.05 E-value=0.026 Score=50.20 Aligned_cols=36 Identities=31% Similarity=0.416 Sum_probs=32.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
.+.+|||+|+|++|..++..+...|..+++.+|.+.
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 457999999999999999999999999999998765
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=96.04 E-value=0.019 Score=51.36 Aligned_cols=79 Identities=22% Similarity=0.302 Sum_probs=49.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC------------hhhHH----HHHhcCCcEE---ecCCCCCchH
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID------------PKKFD----RAKNFGVTEF---VNPKDHDKPI 245 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~------------~~~~~----~~~~~g~~~v---i~~~~~~~~~ 245 (371)
.|+++||+|+ +++|.+.++.+...|+ +|++++++ +++.+ .+++.+.... .|..+ ....
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v 104 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRD-FDAM 104 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHH
Confidence 5789999988 9999999998889999 88888776 33322 2234454332 23332 1222
Q ss_pred HHHHHhhcC--CCccEEEEccCC
Q 017431 246 QQVLVDLTD--GGVDYSFECIGN 266 (371)
Q Consensus 246 ~~~~~~~~~--gg~dvvid~~g~ 266 (371)
.+.+.+... +++|++++++|.
T Consensus 105 ~~~~~~~~~~~g~iD~lv~nAg~ 127 (299)
T 3t7c_A 105 QAAVDDGVTQLGRLDIVLANAAL 127 (299)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHhCCCCEEEECCCC
Confidence 222322221 379999998873
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.04 E-value=0.026 Score=47.90 Aligned_cols=96 Identities=18% Similarity=0.226 Sum_probs=59.4
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCC
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 266 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~ 266 (371)
.+|||+|+ |.+|...++.+...|+ +|+++++++++.+.+. -+. .++..+-.+. +.+.+... ++|+||++++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-~~~-~~~~~Dl~d~---~~~~~~~~-~~d~vi~~a~~ 77 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGF-EVTAVVRHPEKIKIEN-EHL-KVKKADVSSL---DEVCEVCK-GADAVISAFNP 77 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTC-EEEEECSCGGGCCCCC-TTE-EEECCCTTCH---HHHHHHHT-TCSEEEECCCC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEEcCcccchhcc-Cce-EEEEecCCCH---HHHHHHhc-CCCEEEEeCcC
Confidence 58999988 9999999999999998 9999999877543211 111 2221111112 22333322 59999999886
Q ss_pred H-----------HHHHHHHHHhccC-CceEEEEccC
Q 017431 267 V-----------SVMRAALECCHKG-WGTSVIVGVA 290 (371)
Q Consensus 267 ~-----------~~~~~~~~~l~~~-~G~iv~~g~~ 290 (371)
. .....+++.+... -.++|.+++.
T Consensus 78 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~ 113 (227)
T 3dhn_A 78 GWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGA 113 (227)
T ss_dssp ------CCSHHHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred CCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCCh
Confidence 3 1234455555542 1478888764
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=96.04 E-value=0.011 Score=52.44 Aligned_cols=79 Identities=19% Similarity=0.302 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh-----------HHHHHhcCCcEE---ecCCCCCchHHHHHH
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-----------FDRAKNFGVTEF---VNPKDHDKPIQQVLV 250 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~-----------~~~~~~~g~~~v---i~~~~~~~~~~~~~~ 250 (371)
+++++||+|+ +++|.+.++.+...|+ +|+++++++++ .+.+++.+.... .|..+ .....+.+.
T Consensus 8 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~ 85 (285)
T 3sc4_A 8 RGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRD-GDAVAAAVA 85 (285)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTS-HHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHH
Confidence 4789999988 9999999888888899 89999887652 222334444322 23332 122222233
Q ss_pred hhcC--CCccEEEEccCC
Q 017431 251 DLTD--GGVDYSFECIGN 266 (371)
Q Consensus 251 ~~~~--gg~dvvid~~g~ 266 (371)
+... +++|++++++|.
T Consensus 86 ~~~~~~g~id~lvnnAg~ 103 (285)
T 3sc4_A 86 KTVEQFGGIDICVNNASA 103 (285)
T ss_dssp HHHHHHSCCSEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 2221 379999999884
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=96.04 E-value=0.017 Score=51.59 Aligned_cols=79 Identities=20% Similarity=0.227 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh---cCC-c-EE--ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN---FGV-T-EF--VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~---~g~-~-~v--i~~~~~~~~~~~~~~~~~~-- 254 (371)
+++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++ .+. . .. .|..+ .....+.+.+...
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 117 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSD-PGSCADAARTVVDAF 117 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCC-HHHHHHHHHHHHHHc
Confidence 5789999988 9999999999889999 899999988765433 23 231 1 12 23332 1222222222221
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|++++++|.
T Consensus 118 g~iD~lvnnAg~ 129 (293)
T 3rih_A 118 GALDVVCANAGI 129 (293)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 379999998874
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=96.03 E-value=0.014 Score=51.03 Aligned_cols=78 Identities=19% Similarity=0.271 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~~--g 255 (371)
.++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++.+.... .|..+ ..+..+.+.+... +
T Consensus 13 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 90 (260)
T 2zat_A 13 ENKVALVTASTDGIGLAIARRLAQDGA-HVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGK-AEDRERLVAMAVNLHG 90 (260)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 5789999988 9999999998888999 899998887765432 22343221 23222 1222222222211 3
Q ss_pred CccEEEEccC
Q 017431 256 GVDYSFECIG 265 (371)
Q Consensus 256 g~dvvid~~g 265 (371)
++|+++++.|
T Consensus 91 ~iD~lv~~Ag 100 (260)
T 2zat_A 91 GVDILVSNAA 100 (260)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999999887
|
| >1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=96.03 E-value=0.023 Score=50.07 Aligned_cols=69 Identities=17% Similarity=0.180 Sum_probs=51.4
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhH-HHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEE
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF-DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE 262 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~-~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid 262 (371)
...++++||+|+|++|.+++..+...|+++|+++.++.+|. +++++++.. .. . + . . ...+|+|++
T Consensus 116 ~~~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~-~~-~-~--~-------~--~~~~DivIn 181 (271)
T 1npy_A 116 LNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA-YI-N-S--L-------E--NQQADILVN 181 (271)
T ss_dssp CCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE-EE-S-C--C-------T--TCCCSEEEE
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-cc-h-h--h-------h--cccCCEEEE
Confidence 34578999999999999999889999988899999998774 455666642 11 0 1 0 0 126999999
Q ss_pred ccCC
Q 017431 263 CIGN 266 (371)
Q Consensus 263 ~~g~ 266 (371)
|++.
T Consensus 182 aTp~ 185 (271)
T 1npy_A 182 VTSI 185 (271)
T ss_dssp CSST
T ss_pred CCCC
Confidence 9886
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.02 E-value=0.034 Score=48.39 Aligned_cols=103 Identities=20% Similarity=0.303 Sum_probs=61.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcC--CCeEEEEcCChhhHHHH-HhcCCcEE---ecCCCCCchHHHHHHhhcC--CCc
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAG--ASRVIGIDIDPKKFDRA-KNFGVTEF---VNPKDHDKPIQQVLVDLTD--GGV 257 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g--~~~v~~v~~~~~~~~~~-~~~g~~~v---i~~~~~~~~~~~~~~~~~~--gg~ 257 (371)
|+++||+|+ +++|.+.++.+...| + +|+.+++++++.+.+ ++++.... .|..+ .....+.+.+... +++
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~i 79 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDT-VVYGVARSEAPLKKLKEKYGDRFFYVVGDITE-DSVLKQLVNAAVKGHGKI 79 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSC-EEEEEESCHHHHHHHHHHHGGGEEEEESCTTS-HHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCe-EEEEecCCHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHhcCCc
Confidence 578999988 999999777666654 5 888888888776544 34443322 23333 1222222222211 379
Q ss_pred cEEEEccCCH--------------------------HHHHHHHHHhccCCceEEEEccCC
Q 017431 258 DYSFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 258 dvvid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
|+++++.|.. .+.+.++..|.+..|++|.+++..
T Consensus 80 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~ 139 (254)
T 3kzv_A 80 DSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDA 139 (254)
T ss_dssp CEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSC
T ss_pred cEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCch
Confidence 9999988741 123444444443238999997753
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=96.02 E-value=0.023 Score=50.26 Aligned_cols=76 Identities=20% Similarity=0.264 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEE---ecCCCCCchHHHHHHhhcC-CCccE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF---VNPKDHDKPIQQVLVDLTD-GGVDY 259 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~v---i~~~~~~~~~~~~~~~~~~-gg~dv 259 (371)
+++++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+ ++++.... .|..+ .....+.+.+... +++|+
T Consensus 29 ~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~id~ 106 (281)
T 3ppi_A 29 EGASAIVSGGAGGLGEATVRRLHADGL-GVVIADLAAEKGKALADELGNRAEFVSTNVTS-EDSVLAAIEAANQLGRLRY 106 (281)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTC-HHHHHHHHHHHTTSSEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEcCCCC-HHHHHHHHHHHHHhCCCCe
Confidence 4689999988 9999999988888999 899999988876544 45554332 23332 1223333333311 27899
Q ss_pred EEEc
Q 017431 260 SFEC 263 (371)
Q Consensus 260 vid~ 263 (371)
++++
T Consensus 107 lv~~ 110 (281)
T 3ppi_A 107 AVVA 110 (281)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9987
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=96.02 E-value=0.015 Score=51.24 Aligned_cols=78 Identities=29% Similarity=0.388 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcE-E--ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~~~~~~~--g 255 (371)
.++++||+|+ |.+|.+.+..+...|+ +|+++++++++.+.+ ++.+... . .|..+ ...+.+.+.+... +
T Consensus 33 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g 110 (279)
T 3ctm_A 33 KGKVASVTGSSGGIGWAVAEAYAQAGA-DVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISD-PKSVEETISQQEKDFG 110 (279)
T ss_dssp TTCEEEETTTTSSHHHHHHHHHHHHTC-EEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCC-HHHHHHHHHHHHHHhC
Confidence 4689999988 9999998888888899 899888877654332 2234322 2 23322 1222233332211 3
Q ss_pred CccEEEEccC
Q 017431 256 GVDYSFECIG 265 (371)
Q Consensus 256 g~dvvid~~g 265 (371)
.+|++++++|
T Consensus 111 ~id~li~~Ag 120 (279)
T 3ctm_A 111 TIDVFVANAG 120 (279)
T ss_dssp CCSEEEECGG
T ss_pred CCCEEEECCc
Confidence 6999999876
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.02 E-value=0.01 Score=51.95 Aligned_cols=79 Identities=10% Similarity=0.205 Sum_probs=50.3
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcC---CCeEEEEcCChhhHHHHHhc---CCcE-E--ecCCCCCchHHHHHHh---
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAG---ASRVIGIDIDPKKFDRAKNF---GVTE-F--VNPKDHDKPIQQVLVD--- 251 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g---~~~v~~v~~~~~~~~~~~~~---g~~~-v--i~~~~~~~~~~~~~~~--- 251 (371)
.++++|||+|+ |.+|.+.++.+...| + +|++++++.++.+.++++ +... . .|..+ .....+.+.+
T Consensus 19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~ 96 (267)
T 1sny_A 19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRN-FDAYDKLVADIEG 96 (267)
T ss_dssp -CCSEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTC-GGGHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhcCCCCc-EEEEEecChhhhHHHHHhhccCCceEEEEecCCC-hHHHHHHHHHHHH
Confidence 34678999988 999999999888889 7 899998887654433332 2222 2 23332 1233333332
Q ss_pred hcCC-CccEEEEccC
Q 017431 252 LTDG-GVDYSFECIG 265 (371)
Q Consensus 252 ~~~g-g~dvvid~~g 265 (371)
..+. ++|++|+++|
T Consensus 97 ~~g~~~id~li~~Ag 111 (267)
T 1sny_A 97 VTKDQGLNVLFNNAG 111 (267)
T ss_dssp HHGGGCCSEEEECCC
T ss_pred hcCCCCccEEEECCC
Confidence 2222 5999999887
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=96.02 E-value=0.035 Score=46.90 Aligned_cols=96 Identities=10% Similarity=0.095 Sum_probs=60.3
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCH
Q 017431 189 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 267 (371)
Q Consensus 189 ~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~ 267 (371)
+|||+|+ |.+|...++.+...|+ +|+++++++++.+.+ .+. .++..+- .+..+.+.+... ++|++|++++..
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~--~~~-~~~~~D~--~d~~~~~~~~~~-~~d~vi~~ag~~ 74 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQY--NNV-KAVHFDV--DWTPEEMAKQLH-GMDAIINVSGSG 74 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCC--TTE-EEEECCT--TSCHHHHHTTTT-TCSEEEECCCCT
T ss_pred eEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccchhhc--CCc-eEEEecc--cCCHHHHHHHHc-CCCEEEECCcCC
Confidence 6999987 9999999999999998 899999988754322 122 2222211 111234444433 699999999853
Q ss_pred H---------HHHHHHHHhccC-CceEEEEccCC
Q 017431 268 S---------VMRAALECCHKG-WGTSVIVGVAA 291 (371)
Q Consensus 268 ~---------~~~~~~~~l~~~-~G~iv~~g~~~ 291 (371)
. ....+++.+... .+++|.+++..
T Consensus 75 ~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~ 108 (219)
T 3dqp_A 75 GKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIF 108 (219)
T ss_dssp TSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCCcEeEeHHHHHHHHHHHHHhCCCEEEEECccc
Confidence 1 133344444432 25899887643
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=96.02 E-value=0.018 Score=49.89 Aligned_cols=79 Identities=22% Similarity=0.317 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~-~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~~-- 254 (371)
+++++||+|+ |++|.+.++.+...|+ +|+++++ ++++.+.+ ++.+.... .|..+ .....+.+.+...
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 80 (246)
T 2uvd_A 3 KGKVALVTGASRGIGRAIAIDLAKQGA-NVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVAN-AEDVTNMVKQTVDVF 80 (246)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4688999988 9999999998888999 8888877 66554332 22343322 23332 1223333332221
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|++++++|.
T Consensus 81 g~id~lv~nAg~ 92 (246)
T 2uvd_A 81 GQVDILVNNAGV 92 (246)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 379999998874
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=96.02 E-value=0.017 Score=51.28 Aligned_cols=70 Identities=11% Similarity=0.071 Sum_probs=51.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCC---cEEecCCCCCchHHHHHHhhcCCCccEE
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGV---TEFVNPKDHDKPIQQVLVDLTDGGVDYS 260 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~g~---~~vi~~~~~~~~~~~~~~~~~~gg~dvv 260 (371)
-.+++++|+|+|++|.+.+..+...|+.+|+++.++.++.+ ++++++. .......+ +. ..+|+|
T Consensus 124 l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~-----------l~-~~aDiI 191 (281)
T 3o8q_A 124 LKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQ-----------LK-QSYDVI 191 (281)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG-----------CC-SCEEEE
T ss_pred ccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHH-----------hc-CCCCEE
Confidence 36889999999999999988888899778999999888754 4445542 12222111 11 379999
Q ss_pred EEccCC
Q 017431 261 FECIGN 266 (371)
Q Consensus 261 id~~g~ 266 (371)
++|++.
T Consensus 192 InaTp~ 197 (281)
T 3o8q_A 192 INSTSA 197 (281)
T ss_dssp EECSCC
T ss_pred EEcCcC
Confidence 999876
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=96.01 E-value=0.014 Score=51.47 Aligned_cols=80 Identities=28% Similarity=0.327 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEEecCCCC-Cc-hHHHHHHhhc--CCC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFVNPKDH-DK-PIQQVLVDLT--DGG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~vi~~~~~-~~-~~~~~~~~~~--~gg 256 (371)
.|+++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++.+....+...+. +. ...+.+.+.. .++
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 103 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGID 103 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence 5789999988 9999999998889999 899998888765433 23344333222221 12 2222222221 237
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|++++++|.
T Consensus 104 iD~lv~nAg~ 113 (271)
T 4ibo_A 104 VDILVNNAGI 113 (271)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999884
|
| >1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1 | Back alignment and structure |
|---|
Probab=96.01 E-value=0.0043 Score=56.21 Aligned_cols=102 Identities=20% Similarity=0.210 Sum_probs=68.6
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----cCCcEE-ecCCCCCchHHHHHHh
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTEF-VNPKDHDKPIQQVLVD 251 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~v~~v~~~~~~~~~~~~----~g~~~v-i~~~~~~~~~~~~~~~ 251 (371)
+.....++++++||-+|+|. |..+..+++..+. .+|++++.+++..+.+++ .|...+ +...+ ..+...
T Consensus 67 l~~~l~~~~~~~VLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d----~~~~~~- 140 (317)
T 1dl5_A 67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGD----GYYGVP- 140 (317)
T ss_dssp HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC----GGGCCG-
T ss_pred HHHhcCCCCcCEEEEecCCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECC----hhhccc-
Confidence 34556788999999999976 7888888887542 379999999988777654 344321 11111 111000
Q ss_pred hcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEE
Q 017431 252 LTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 252 ~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
..+.||+|+....-.+..+.+.+.|+++ |+++..
T Consensus 141 -~~~~fD~Iv~~~~~~~~~~~~~~~Lkpg-G~lvi~ 174 (317)
T 1dl5_A 141 -EFSPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP 174 (317)
T ss_dssp -GGCCEEEEEECSBBSCCCHHHHHHEEEE-EEEEEE
T ss_pred -cCCCeEEEEEcCCHHHHHHHHHHhcCCC-cEEEEE
Confidence 1237999997665545457788899997 998876
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=96.00 E-value=0.016 Score=51.03 Aligned_cols=79 Identities=11% Similarity=0.050 Sum_probs=50.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH-Hhc----CCcE-E--ecCCCCC----chHHHHHHh
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRA-KNF----GVTE-F--VNPKDHD----KPIQQVLVD 251 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~-~~~~~~~~-~~~----g~~~-v--i~~~~~~----~~~~~~~~~ 251 (371)
+++++||+|+ |++|.+.+..+...|+ +|+++++ ++++.+.+ +++ +... . .|..+ . ......+.+
T Consensus 10 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 87 (276)
T 1mxh_A 10 ECPAAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSL-SSSLLDCCEDIIDC 87 (276)
T ss_dssp -CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSS-STTHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCC-ccccHHHHHHHHHH
Confidence 4688999988 9999999998888999 8999988 77654433 222 4322 1 23333 1 222222222
Q ss_pred hcC--CCccEEEEccCC
Q 017431 252 LTD--GGVDYSFECIGN 266 (371)
Q Consensus 252 ~~~--gg~dvvid~~g~ 266 (371)
... +++|++++++|.
T Consensus 88 ~~~~~g~id~lv~nAg~ 104 (276)
T 1mxh_A 88 SFRAFGRCDVLVNNASA 104 (276)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHhcCCCCEEEECCCC
Confidence 211 379999998873
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=96.00 E-value=0.018 Score=51.45 Aligned_cols=78 Identities=13% Similarity=0.184 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc----CCcE-E--ecCCCCCchHHHHHHhhc--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF----GVTE-F--VNPKDHDKPIQQVLVDLT--D 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~----g~~~-v--i~~~~~~~~~~~~~~~~~--~ 254 (371)
+++++||+|+ |.+|.+.+..+...|+ +|+++++++++.+.+ +++ +... . .|..+ .....+.+.+.. .
T Consensus 25 ~~k~vlITGasggiG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 102 (302)
T 1w6u_A 25 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRD-PDMVQNTVSELIKVA 102 (302)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC-HHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCC-HHHHHHHHHHHHHHc
Confidence 4689999988 9999999998888999 899998888765432 222 4322 2 23322 122222222221 2
Q ss_pred CCccEEEEccC
Q 017431 255 GGVDYSFECIG 265 (371)
Q Consensus 255 gg~dvvid~~g 265 (371)
+.+|++++++|
T Consensus 103 g~id~li~~Ag 113 (302)
T 1w6u_A 103 GHPNIVINNAA 113 (302)
T ss_dssp CSCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 37899999987
|
| >2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.98 E-value=0.023 Score=51.78 Aligned_cols=89 Identities=22% Similarity=0.381 Sum_probs=65.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
-.|++|.|+|.|.+|...++.++.+|+ +|++.+++.++ +.+.++|+.. . ++.+.+. ..|+|+.++
T Consensus 163 l~g~tvgIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~----~----~l~ell~-----~aDvV~l~~ 227 (335)
T 2g76_A 163 LNGKTLGILGLGRIGREVATRMQSFGM-KTIGYDPIISP-EVSASFGVQQ----L----PLEEIWP-----LCDFITVHT 227 (335)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSSCH-HHHHHTTCEE----C----CHHHHGG-----GCSEEEECC
T ss_pred CCcCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcch-hhhhhcCcee----C----CHHHHHh-----cCCEEEEec
Confidence 468899999999999999999999999 89999887765 3556777632 1 1222221 489999887
Q ss_pred CCHH----HH-HHHHHHhccCCceEEEEcc
Q 017431 265 GNVS----VM-RAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 265 g~~~----~~-~~~~~~l~~~~G~iv~~g~ 289 (371)
.... .+ ...+..|+++ +.+|.++.
T Consensus 228 P~t~~t~~li~~~~l~~mk~g-ailIN~ar 256 (335)
T 2g76_A 228 PLLPSTTGLLNDNTFAQCKKG-VRVVNCAR 256 (335)
T ss_dssp CCCTTTTTSBCHHHHTTSCTT-EEEEECSC
T ss_pred CCCHHHHHhhCHHHHhhCCCC-cEEEECCC
Confidence 6532 12 4677888886 88888865
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=95.98 E-value=0.019 Score=49.85 Aligned_cols=76 Identities=18% Similarity=0.312 Sum_probs=50.7
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcE-E--ecCCCCCchHHHHHHhhcC--CCccEE
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE-F--VNPKDHDKPIQQVLVDLTD--GGVDYS 260 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~-v--i~~~~~~~~~~~~~~~~~~--gg~dvv 260 (371)
+++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++++... . .|..+ .....+.+.+... +++|++
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~iD~l 78 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN-RAAIEEMLASLPAEWCNIDIL 78 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTC-HHHHHHHHHTSCTTTCCCCEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCC-HHHHHHHHHHHHHhCCCCCEE
Confidence 36899988 9999999998888999 899999988766543 3444322 2 23333 1233333444333 279999
Q ss_pred EEccC
Q 017431 261 FECIG 265 (371)
Q Consensus 261 id~~g 265 (371)
+++.|
T Consensus 79 vnnAg 83 (248)
T 3asu_A 79 VNNAG 83 (248)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 99887
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=95.97 E-value=0.008 Score=52.93 Aligned_cols=74 Identities=23% Similarity=0.265 Sum_probs=46.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCch-HHHHHHhhcC--CCccEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKP-IQQVLVDLTD--GGVDYSF 261 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~-~~~~~~~~~~--gg~dvvi 261 (371)
.|+++||+|+ |++|.+.++.+...|+ +|++++++.++.+....+ ..|..+ .. ....+.+... +++|+++
T Consensus 27 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~----~~Dv~~--~~~~~~~~~~~~~~~g~iD~lv 99 (266)
T 3uxy_A 27 EGKVALVTGAAGGIGGAVVTALRAAGA-RVAVADRAVAGIAADLHL----PGDLRE--AAYADGLPGAVAAGLGRLDIVV 99 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECSSCCTTSCCSEEC----CCCTTS--HHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHhhhcc----CcCCCC--HHHHHHHHHHHHHhcCCCCEEE
Confidence 4789999988 9999999998888999 899988876543211111 112222 22 1112222111 3799999
Q ss_pred EccCC
Q 017431 262 ECIGN 266 (371)
Q Consensus 262 d~~g~ 266 (371)
+++|.
T Consensus 100 nnAg~ 104 (266)
T 3uxy_A 100 NNAGV 104 (266)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 98884
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=95.97 E-value=0.011 Score=51.98 Aligned_cols=78 Identities=14% Similarity=0.250 Sum_probs=49.6
Q ss_pred CCCEEEEEc---CChHHHHHHHHHHHcCCCeEEEEcCChhh--HHHHHhcCCcE-E--ecCCCCCchHHHHHH---hhcC
Q 017431 186 PGSIVAVFG---LGTVGLAVAEGAKAAGASRVIGIDIDPKK--FDRAKNFGVTE-F--VNPKDHDKPIQQVLV---DLTD 254 (371)
Q Consensus 186 ~g~~VlI~G---ag~vG~~ai~la~~~g~~~v~~v~~~~~~--~~~~~~~g~~~-v--i~~~~~~~~~~~~~~---~~~~ 254 (371)
+++++||+| +|++|.+.++.+...|+ +|+++++++++ .++.++++... . .|..+ .....+.+. +..+
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g 83 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQN-EEHLASLAGRVTEAIG 83 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTC-HHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHhcCCCceEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 478999997 47999999998888999 89998887755 33444454321 1 23333 122222222 2222
Q ss_pred --CCccEEEEccC
Q 017431 255 --GGVDYSFECIG 265 (371)
Q Consensus 255 --gg~dvvid~~g 265 (371)
+++|+++++.|
T Consensus 84 ~~~~iD~lv~nAg 96 (269)
T 2h7i_A 84 AGNKLDGVVHSIG 96 (269)
T ss_dssp TTCCEEEEEECCC
T ss_pred CCCCceEEEECCc
Confidence 16999999887
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=95.96 E-value=0.02 Score=51.13 Aligned_cols=81 Identities=17% Similarity=0.135 Sum_probs=50.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-H---hcCC-cE-E--ecCCCCCchHHHHHHhhc--
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-K---NFGV-TE-F--VNPKDHDKPIQQVLVDLT-- 253 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~---~~g~-~~-v--i~~~~~~~~~~~~~~~~~-- 253 (371)
..+++|||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ + +.+. .. . .|..+........+....
T Consensus 10 ~~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~ 88 (311)
T 3o26_A 10 TKRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH 88 (311)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence 35789999988 9999999888888999 899999988764332 2 2222 11 1 233331012222222221
Q ss_pred CCCccEEEEccCC
Q 017431 254 DGGVDYSFECIGN 266 (371)
Q Consensus 254 ~gg~dvvid~~g~ 266 (371)
.+++|++++++|.
T Consensus 89 ~g~iD~lv~nAg~ 101 (311)
T 3o26_A 89 FGKLDILVNNAGV 101 (311)
T ss_dssp HSSCCEEEECCCC
T ss_pred CCCCCEEEECCcc
Confidence 1379999999984
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.93 E-value=0.012 Score=50.74 Aligned_cols=79 Identities=16% Similarity=0.234 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcC--CCeEEEEcCChhhHHHHHhc-CCcE-E--ecCCCCCchHHHHHH---hhcCC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAG--ASRVIGIDIDPKKFDRAKNF-GVTE-F--VNPKDHDKPIQQVLV---DLTDG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g--~~~v~~v~~~~~~~~~~~~~-g~~~-v--i~~~~~~~~~~~~~~---~~~~g 255 (371)
++++|||+|+ |.+|.+.++.+...| + +|++++++.++.+.++++ +... . .|..+ .....+.+. +..+.
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~g~~~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~ 79 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIR-HIIATARDVEKATELKSIKDSRVHVLPLTVTC-DKSLDTFVSKVGEIVGS 79 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCC-EEEEEESSGGGCHHHHTCCCTTEEEEECCTTC-HHHHHHHHHHHHHHHGG
T ss_pred CCCEEEEecCCchHHHHHHHHHHhcCCCc-EEEEEecCHHHHHHHHhccCCceEEEEeecCC-HHHHHHHHHHHHHhcCC
Confidence 3678999988 999999999888889 7 899999988877666655 2221 2 23222 112222222 22221
Q ss_pred -CccEEEEccCC
Q 017431 256 -GVDYSFECIGN 266 (371)
Q Consensus 256 -g~dvvid~~g~ 266 (371)
++|++|+++|.
T Consensus 80 ~~id~li~~Ag~ 91 (250)
T 1yo6_A 80 DGLSLLINNAGV 91 (250)
T ss_dssp GCCCEEEECCCC
T ss_pred CCCcEEEECCcc
Confidence 69999998863
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=95.93 E-value=0.0087 Score=52.10 Aligned_cols=94 Identities=26% Similarity=0.363 Sum_probs=57.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCC
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 266 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~ 266 (371)
+++||+|+ |++|.+.++.+...|+ +|+++++++++.+. .+. .|..+ .....+.+.+. .+++|++++++|.
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~--~~~----~Dl~~-~~~v~~~~~~~-~~~id~lv~~Ag~ 72 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDAEVIA--DLS----TAEGR-KQAIADVLAKC-SKGMDGLVLCAGL 72 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEEC--CTT----SHHHH-HHHHHHHHTTC-TTCCSEEEECCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhhcc--ccc----cCCCC-HHHHHHHHHHh-CCCCCEEEECCCC
Confidence 47899988 9999999998888999 89998887654211 000 01100 01111222222 2478999998875
Q ss_pred HH------------------HHHHHHHHhcc-CCceEEEEccC
Q 017431 267 VS------------------VMRAALECCHK-GWGTSVIVGVA 290 (371)
Q Consensus 267 ~~------------------~~~~~~~~l~~-~~G~iv~~g~~ 290 (371)
.. +.+.++..|.. +.|++|.+++.
T Consensus 73 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~ 115 (257)
T 1fjh_A 73 GPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSV 115 (257)
T ss_dssp CTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG
T ss_pred CCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECCh
Confidence 22 24445555543 23899998764
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=95.93 E-value=0.018 Score=50.20 Aligned_cols=77 Identities=23% Similarity=0.348 Sum_probs=48.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE---ecCCCCCchHHHHHHhhc-CCCccEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF---VNPKDHDKPIQQVLVDLT-DGGVDYS 260 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v---i~~~~~~~~~~~~~~~~~-~gg~dvv 260 (371)
+++++||+|+ +++|.+.++.+...|+ +|+++++..+ +..++++.... .|..+ .......+.... .+++|++
T Consensus 8 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~--~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~g~id~l 83 (257)
T 3tl3_A 8 RDAVAVVTGGASGLGLATTKRLLDAGA-QVVVLDIRGE--DVVADLGDRARFAAADVTD-EAAVASALDLAETMGTLRIV 83 (257)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCH--HHHHHTCTTEEEEECCTTC-HHHHHHHHHHHHHHSCEEEE
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCchH--HHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHhCCCCEE
Confidence 4689999988 9999998888888899 8888877544 34445554332 23332 112222222111 2479999
Q ss_pred EEccCC
Q 017431 261 FECIGN 266 (371)
Q Consensus 261 id~~g~ 266 (371)
++++|.
T Consensus 84 v~nAg~ 89 (257)
T 3tl3_A 84 VNCAGT 89 (257)
T ss_dssp EECGGG
T ss_pred EECCCC
Confidence 999883
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=95.92 E-value=0.16 Score=40.15 Aligned_cols=95 Identities=9% Similarity=-0.009 Sum_probs=58.8
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC-hhhHHHHH---hcCCcEEecCCCCCchHHHHHHhhcCCCccEEEE
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID-PKKFDRAK---NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE 262 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~-~~~~~~~~---~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid 262 (371)
..+|+|+|+|.+|...++.+...|. .|++++++ +++.+.+. ..|.. ++.-+. .-.+.+.+..-.++|+++-
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~~~~~-~i~gd~---~~~~~l~~a~i~~ad~vi~ 77 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNAD-VIPGDS---NDSSVLKKAGIDRCRAILA 77 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCE-EEESCT---TSHHHHHHHTTTTCSEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhcCCCe-EEEcCC---CCHHHHHHcChhhCCEEEE
Confidence 4678999999999999999999998 89999886 45544443 22443 332211 1122333332237999999
Q ss_pred ccCCHHH---HHHHHHHhccCCceEEEE
Q 017431 263 CIGNVSV---MRAALECCHKGWGTSVIV 287 (371)
Q Consensus 263 ~~g~~~~---~~~~~~~l~~~~G~iv~~ 287 (371)
+++.... +....+.+.+. .+++..
T Consensus 78 ~~~~d~~n~~~~~~a~~~~~~-~~ii~~ 104 (153)
T 1id1_A 78 LSDNDADNAFVVLSAKDMSSD-VKTVLA 104 (153)
T ss_dssp CSSCHHHHHHHHHHHHHHTSS-SCEEEE
T ss_pred ecCChHHHHHHHHHHHHHCCC-CEEEEE
Confidence 9988542 22334444453 566554
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.90 E-value=0.024 Score=50.59 Aligned_cols=78 Identities=15% Similarity=0.247 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h--------cCCcE-E--ecCCCCCchHHHHHHhh
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N--------FGVTE-F--VNPKDHDKPIQQVLVDL 252 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~--------~g~~~-v--i~~~~~~~~~~~~~~~~ 252 (371)
++++|||+|+ |.+|.+.++.+...|+ +|++++++.++.+.+. + .+... . .|..+ ...+...+.+.
T Consensus 17 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~ 94 (303)
T 1yxm_A 17 QGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRN-EEEVNNLVKST 94 (303)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTC-HHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCC-HHHHHHHHHHH
Confidence 4689999988 9999999998888999 8999988877654322 2 13222 1 23222 12222223322
Q ss_pred cC--CCccEEEEccC
Q 017431 253 TD--GGVDYSFECIG 265 (371)
Q Consensus 253 ~~--gg~dvvid~~g 265 (371)
.. +++|++|+++|
T Consensus 95 ~~~~g~id~li~~Ag 109 (303)
T 1yxm_A 95 LDTFGKINFLVNNGG 109 (303)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 11 36999999988
|
| >3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A | Back alignment and structure |
|---|
Probab=95.90 E-value=0.015 Score=50.88 Aligned_cols=92 Identities=12% Similarity=0.072 Sum_probs=63.9
Q ss_pred ccccchhhhhhhhhcCCCCCCCEEEEEcCC-hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchH
Q 017431 167 LGCGVPTGLGAVWNTAKVEPGSIVAVFGLG-TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPI 245 (371)
Q Consensus 167 ~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag-~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~ 245 (371)
+||+.......|.+.. -.|++++|+|+| .+|..+..++...|+ .|+.+.+.. .+.
T Consensus 132 ~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~gA-tVtv~~~~t---------------------~~L 187 (276)
T 3ngx_A 132 VPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNRNY-TVSVCHSKT---------------------KDI 187 (276)
T ss_dssp CCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC---------------------SCH
T ss_pred CCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHCCC-eEEEEeCCc---------------------ccH
Confidence 4444444444444443 789999999995 699999999999999 788875421 233
Q ss_pred HHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 246 QQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 246 ~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
.+.+++ +|+++.++|.+..+.. ..++++ ..++.+|..
T Consensus 188 ~~~~~~-----ADIVI~Avg~p~~I~~--~~vk~G-avVIDvgi~ 224 (276)
T 3ngx_A 188 GSMTRS-----SKIVVVAVGRPGFLNR--EMVTPG-SVVIDVGIN 224 (276)
T ss_dssp HHHHHH-----SSEEEECSSCTTCBCG--GGCCTT-CEEEECCCE
T ss_pred HHhhcc-----CCEEEECCCCCccccH--hhccCC-cEEEEeccC
Confidence 344433 8999999998764432 457885 888888764
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=95.89 E-value=0.045 Score=48.03 Aligned_cols=80 Identities=20% Similarity=0.147 Sum_probs=49.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhcC-
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLTD- 254 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v-~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~~- 254 (371)
.++++|||+|+ |++|.+.++.+...|+ +|+.+ .+++++.+.+ ++.+.... .|..+ .....+.+.+...
T Consensus 24 ~~~k~vlITGas~gIG~a~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~ 101 (272)
T 4e3z_A 24 SDTPVVLVTGGSRGIGAAVCRLAARQGW-RVGVNYAANREAADAVVAAITESGGEAVAIPGDVGN-AADIAAMFSAVDRQ 101 (272)
T ss_dssp CCSCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHh
Confidence 45689999988 9999999999999999 67665 6666654433 23343222 23322 1222222322221
Q ss_pred -CCccEEEEccCC
Q 017431 255 -GGVDYSFECIGN 266 (371)
Q Consensus 255 -gg~dvvid~~g~ 266 (371)
+++|++++++|.
T Consensus 102 ~g~id~li~nAg~ 114 (272)
T 4e3z_A 102 FGRLDGLVNNAGI 114 (272)
T ss_dssp HSCCCEEEECCCC
T ss_pred CCCCCEEEECCCC
Confidence 379999998873
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=95.89 E-value=0.1 Score=47.33 Aligned_cols=74 Identities=20% Similarity=0.253 Sum_probs=48.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh----hHHHHHhc------CCcEEe--cCCCCCchHHHHHHhh
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK----KFDRAKNF------GVTEFV--NPKDHDKPIQQVLVDL 252 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~----~~~~~~~~------g~~~vi--~~~~~~~~~~~~~~~~ 252 (371)
.+.+|||+|+ |.+|...++.+...|+ +|+++++... ..+.+.+. .-..++ |..+ . +.+.+.
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~---~~~~~~ 97 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRD--L---TTCEQV 97 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTC--H---HHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCC--H---HHHHHH
Confidence 3579999988 9999999999999998 8999888543 22222222 111222 2222 2 233343
Q ss_pred cCCCccEEEEccCC
Q 017431 253 TDGGVDYSFECIGN 266 (371)
Q Consensus 253 ~~gg~dvvid~~g~ 266 (371)
.. ++|+||++++.
T Consensus 98 ~~-~~d~Vih~A~~ 110 (351)
T 3ruf_A 98 MK-GVDHVLHQAAL 110 (351)
T ss_dssp TT-TCSEEEECCCC
T ss_pred hc-CCCEEEECCcc
Confidence 33 79999999884
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=95.89 E-value=0.021 Score=49.76 Aligned_cols=78 Identities=17% Similarity=0.233 Sum_probs=49.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh--HH-HHHh---cCCcEE---ecCCCCCchHHHHHHhhcC--
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK--FD-RAKN---FGVTEF---VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~--~~-~~~~---~g~~~v---i~~~~~~~~~~~~~~~~~~-- 254 (371)
++++||+|+ |++|.+.++.+...|+ +|+++++++++ .+ ..++ .+.... .|..+ .....+.+.+...
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 79 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGF-DIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTD-KANFDSAIDEAAEKL 79 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHh
Confidence 578999988 9999998888888899 89998888765 33 2222 243221 23332 1222222322211
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|+++++.|.
T Consensus 80 g~iD~lv~nAg~ 91 (258)
T 3a28_C 80 GGFDVLVNNAGI 91 (258)
T ss_dssp TCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 379999998873
|
| >2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A | Back alignment and structure |
|---|
Probab=95.88 E-value=0.014 Score=53.79 Aligned_cols=92 Identities=17% Similarity=0.195 Sum_probs=64.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
-.|++|.|+|.|.+|...++.++.+|+++|++.+++..+.+.+.++|+.. . .++.+.+. ..|+|+.++
T Consensus 162 l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~---~----~~l~ell~-----~aDvV~l~~ 229 (364)
T 2j6i_A 162 IEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARR---V----ENIEELVA-----QADIVTVNA 229 (364)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEE---C----SSHHHHHH-----TCSEEEECC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEe---c----CCHHHHHh-----cCCEEEECC
Confidence 47899999999999999999999999933999988876666667777532 1 12322222 478888877
Q ss_pred CCH----HHH-HHHHHHhccCCceEEEEcc
Q 017431 265 GNV----SVM-RAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 265 g~~----~~~-~~~~~~l~~~~G~iv~~g~ 289 (371)
... +.+ ...+..|+++ +.+|.++.
T Consensus 230 P~t~~t~~li~~~~l~~mk~g-a~lIn~ar 258 (364)
T 2j6i_A 230 PLHAGTKGLINKELLSKFKKG-AWLVNTAR 258 (364)
T ss_dssp CCSTTTTTCBCHHHHTTSCTT-EEEEECSC
T ss_pred CCChHHHHHhCHHHHhhCCCC-CEEEECCC
Confidence 652 122 3456777775 77777654
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=95.88 E-value=0.017 Score=50.23 Aligned_cols=75 Identities=25% Similarity=0.279 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE-ecCCCCCchHHHHHHhhc--CCCccEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYSF 261 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~--~gg~dvvi 261 (371)
+++++||+|+ |++|.+.++.+...|+ +|++++++++. ++.+...+ .|..+ .....+.+.+.. .+++|+++
T Consensus 6 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~----~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~g~id~lv 79 (250)
T 2fwm_X 6 SGKNVWVTGAGKGIGYATALAFVEAGA-KVTGFDQAFTQ----EQYPFATEVMDVAD-AAQVAQVCQRLLAETERLDALV 79 (250)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCCCS----SCCSSEEEECCTTC-HHHHHHHHHHHHHHCSCCCEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCchhh----hcCCceEEEcCCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 4689999988 9999999999999999 89998887653 22342221 23333 122333333221 23799999
Q ss_pred EccCC
Q 017431 262 ECIGN 266 (371)
Q Consensus 262 d~~g~ 266 (371)
++.|.
T Consensus 80 ~~Ag~ 84 (250)
T 2fwm_X 80 NAAGI 84 (250)
T ss_dssp ECCCC
T ss_pred ECCCc
Confidence 98874
|
| >2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A* | Back alignment and structure |
|---|
Probab=95.87 E-value=0.022 Score=49.64 Aligned_cols=94 Identities=26% Similarity=0.477 Sum_probs=64.2
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCc-EEecCCCCCchHHHHHHhhcCCCcc
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT-EFVNPKDHDKPIQQVLVDLTDGGVD 258 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~-~vi~~~~~~~~~~~~~~~~~~gg~d 258 (371)
+.++++||-+|+|. |..++.+++ .|+ +|++++.++...+.+++ .+.. .++. .++.+. ...+.||
T Consensus 118 ~~~~~~VLDiGcG~-G~l~~~la~-~g~-~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~-----~d~~~~---~~~~~fD 186 (254)
T 2nxc_A 118 LRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLE-----GSLEAA---LPFGPFD 186 (254)
T ss_dssp CCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEE-----SCHHHH---GGGCCEE
T ss_pred cCCCCEEEEecCCC-cHHHHHHHH-hCC-eEEEEECCHHHHHHHHHHHHHcCCcEEEEE-----CChhhc---CcCCCCC
Confidence 57889999999875 777777666 588 99999999987776654 3432 2221 222222 2234799
Q ss_pred EEEEccCC---HHHHHHHHHHhccCCceEEEEcc
Q 017431 259 YSFECIGN---VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 259 vvid~~g~---~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
+|+..... ...+..+.+.|+++ |+++..+.
T Consensus 187 ~Vv~n~~~~~~~~~l~~~~~~Lkpg-G~lils~~ 219 (254)
T 2nxc_A 187 LLVANLYAELHAALAPRYREALVPG-GRALLTGI 219 (254)
T ss_dssp EEEEECCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred EEEECCcHHHHHHHHHHHHHHcCCC-CEEEEEee
Confidence 99965422 24578888899997 99987654
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=95.87 E-value=0.028 Score=49.78 Aligned_cols=79 Identities=19% Similarity=0.268 Sum_probs=49.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH-H---hc-CCcEE-e--cCCCCCchHHHHHHhhc--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRA-K---NF-GVTEF-V--NPKDHDKPIQQVLVDLT-- 253 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~-~~~~~~~~-~---~~-g~~~v-i--~~~~~~~~~~~~~~~~~-- 253 (371)
.++++||+|+ |++|.+.++.+...|+ +|+++++ ++++.+.+ + +. +.... + |..+ .....+.+.+..
T Consensus 24 ~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~ 101 (281)
T 3v2h_A 24 MTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTK-PSEIADMMAMVADR 101 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTC-HHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCC-HHHHHHHHHHHHHH
Confidence 4689999988 9999999998889999 8999887 44443322 2 22 32222 2 2222 122222222221
Q ss_pred CCCccEEEEccCC
Q 017431 254 DGGVDYSFECIGN 266 (371)
Q Consensus 254 ~gg~dvvid~~g~ 266 (371)
-+++|++++++|.
T Consensus 102 ~g~iD~lv~nAg~ 114 (281)
T 3v2h_A 102 FGGADILVNNAGV 114 (281)
T ss_dssp TSSCSEEEECCCC
T ss_pred CCCCCEEEECCCC
Confidence 2379999998884
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=95.86 E-value=0.019 Score=49.81 Aligned_cols=79 Identities=20% Similarity=0.282 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhc--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~--~g 255 (371)
++++|||+|+ |.+|.+.++.+...|+ +|+++++++++.+.+ ++.+.... .|..+ ...+.+.+.+.. .+
T Consensus 10 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 87 (255)
T 1fmc_A 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS-EQELSALADFAISKLG 87 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCC-HHHHHHHHHHHHHhcC
Confidence 4689999988 9999999998888899 899999887765432 22343221 23222 122222222221 13
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|++++++|.
T Consensus 88 ~~d~vi~~Ag~ 98 (255)
T 1fmc_A 88 KVDILVNNAGG 98 (255)
T ss_dssp SCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999998873
|
| >3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A* | Back alignment and structure |
|---|
Probab=95.85 E-value=0.044 Score=45.99 Aligned_cols=97 Identities=18% Similarity=0.124 Sum_probs=66.9
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE-ecCCCCCchHHHHHHhhcCCCccEE
Q 017431 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYS 260 (371)
Q Consensus 182 ~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~gg~dvv 260 (371)
..+.++.+||-+|+|. |..+..+++. |+ +|++++.+++..+.+++.+...+ +...+. .+ + ...+.||+|
T Consensus 42 ~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~-~~----~--~~~~~~D~v 111 (218)
T 3ou2_A 42 RAGNIRGDVLELASGT-GYWTRHLSGL-AD-RVTALDGSAEMIAEAGRHGLDNVEFRQQDL-FD----W--TPDRQWDAV 111 (218)
T ss_dssp TTTTSCSEEEEESCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHGGGCCTTEEEEECCT-TS----C--CCSSCEEEE
T ss_pred hcCCCCCeEEEECCCC-CHHHHHHHhc-CC-eEEEEeCCHHHHHHHHhcCCCCeEEEeccc-cc----C--CCCCceeEE
Confidence 3467888999998864 7777777777 77 99999999999998888663221 111110 11 0 122389999
Q ss_pred EEccC-----C---HHHHHHHHHHhccCCceEEEEcc
Q 017431 261 FECIG-----N---VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 261 id~~g-----~---~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
+.... . ...++.+.+.|+++ |.++....
T Consensus 112 ~~~~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~ 147 (218)
T 3ou2_A 112 FFAHWLAHVPDDRFEAFWESVRSAVAPG-GVVEFVDV 147 (218)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred EEechhhcCCHHHHHHHHHHHHHHcCCC-eEEEEEeC
Confidence 96432 1 35688889999997 99987754
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=95.84 E-value=0.028 Score=52.59 Aligned_cols=82 Identities=20% Similarity=0.210 Sum_probs=52.1
Q ss_pred CCC-CCCCEEEEEcC-ChHHHHHHHHHHH-cCCCeEEEEcCChhh----------------HHHHHhcCCcEE-e--cCC
Q 017431 182 AKV-EPGSIVAVFGL-GTVGLAVAEGAKA-AGASRVIGIDIDPKK----------------FDRAKNFGVTEF-V--NPK 239 (371)
Q Consensus 182 ~~~-~~g~~VlI~Ga-g~vG~~ai~la~~-~g~~~v~~v~~~~~~----------------~~~~~~~g~~~v-i--~~~ 239 (371)
..+ +.++++||+|+ +++|.+....+.. .|+ +|++++++.+. .+.+++.|.... + |..
T Consensus 55 ~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA-~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvt 133 (422)
T 3s8m_A 55 GVRNDGPKKVLVIGASSGYGLASRITAAFGFGA-DTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAF 133 (422)
T ss_dssp CCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred cccccCCCEEEEECCChHHHHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCC
Confidence 344 45789999988 8999997776666 899 88888766432 134556665432 2 322
Q ss_pred CCCch----HHHHHHhhcCCCccEEEEccCC
Q 017431 240 DHDKP----IQQVLVDLTDGGVDYSFECIGN 266 (371)
Q Consensus 240 ~~~~~----~~~~~~~~~~gg~dvvid~~g~ 266 (371)
+ .+ ..+.+.+..+|++|++++++|.
T Consensus 134 d--~~~v~~~v~~i~~~~~G~IDiLVNNAG~ 162 (422)
T 3s8m_A 134 S--DAARAQVIELIKTEMGGQVDLVVYSLAS 162 (422)
T ss_dssp S--HHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred C--HHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence 2 22 2223333333689999998875
|
| >4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=95.83 E-value=0.024 Score=48.71 Aligned_cols=102 Identities=16% Similarity=0.190 Sum_probs=67.6
Q ss_pred hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHhc----CCcEEecCCCCCchHHHHHHhhcC
Q 017431 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~v~~v~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~~~~~~~~ 254 (371)
+...++||++||=+|+| .|..+..+|+..|. .+|++++.+++..+.+++. +....+........ .. ....
T Consensus 71 ~~l~ikpG~~VldlG~G-~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~---~~-~~~~ 145 (233)
T 4df3_A 71 IELPVKEGDRILYLGIA-SGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPE---KY-RHLV 145 (233)
T ss_dssp SCCCCCTTCEEEEETCT-TSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGG---GG-TTTC
T ss_pred hhcCCCCCCEEEEecCc-CCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCcc---cc-cccc
Confidence 55789999999999986 47788888988874 4899999999887766543 21111211110011 00 1112
Q ss_pred CCccEEEEccCCH----HHHHHHHHHhccCCceEEEE
Q 017431 255 GGVDYSFECIGNV----SVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 255 gg~dvvid~~g~~----~~~~~~~~~l~~~~G~iv~~ 287 (371)
+.+|+||.....+ ..+..+.+.|+++ |+++..
T Consensus 146 ~~vDvVf~d~~~~~~~~~~l~~~~r~LKpG-G~lvI~ 181 (233)
T 4df3_A 146 EGVDGLYADVAQPEQAAIVVRNARFFLRDG-GYMLMA 181 (233)
T ss_dssp CCEEEEEECCCCTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred ceEEEEEEeccCChhHHHHHHHHHHhccCC-CEEEEE
Confidence 3689988765553 3577788899997 998765
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=95.82 E-value=0.019 Score=50.71 Aligned_cols=77 Identities=13% Similarity=0.141 Sum_probs=50.5
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCC--c-EE--ecCCCCCchHHHHHHhhcC--CCcc
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV--T-EF--VNPKDHDKPIQQVLVDLTD--GGVD 258 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~--~-~v--i~~~~~~~~~~~~~~~~~~--gg~d 258 (371)
+++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ +++.. . .. .|..+ .....+.+.+... +++|
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD 99 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGW-SLVLTGRREERLQALAGELSAKTRVLPLTLDVRD-RAAMSAAVDNLPEEFATLR 99 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTC-HHHHHHHHHTCCGGGSSCC
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHhCCCC
Confidence 68999988 8999999998888999 899999988766543 33321 1 12 23333 1223333333322 3689
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
+++++.|.
T Consensus 100 ~lvnnAG~ 107 (272)
T 2nwq_A 100 GLINNAGL 107 (272)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99998873
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=95.81 E-value=0.02 Score=49.41 Aligned_cols=77 Identities=19% Similarity=0.341 Sum_probs=49.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc----CCcE-E--ecCCCCCchHHHHHHhhcC--C
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF----GVTE-F--VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~----g~~~-v--i~~~~~~~~~~~~~~~~~~--g 255 (371)
++++||+|+ |.+|.+.+..+...|+ +|+++++++++.+.+ +++ +... . .|..+ .....+.+.+... +
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 79 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGD-RVAALDLSAETLEETARTHWHAYADKVLRVRADVAD-EGDVNAAIAATMEQFG 79 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHhC
Confidence 578999988 9999999998888999 899998887765533 222 3221 1 23322 1222223322211 3
Q ss_pred CccEEEEccC
Q 017431 256 GVDYSFECIG 265 (371)
Q Consensus 256 g~dvvid~~g 265 (371)
++|++++++|
T Consensus 80 ~id~li~~Ag 89 (250)
T 2cfc_A 80 AIDVLVNNAG 89 (250)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999999886
|
| >3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP} | Back alignment and structure |
|---|
Probab=95.81 E-value=0.015 Score=49.96 Aligned_cols=100 Identities=24% Similarity=0.244 Sum_probs=66.5
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----cCCcE-E-ecCCCCCchHHHHHHhhc--
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTE-F-VNPKDHDKPIQQVLVDLT-- 253 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~v~~v~~~~~~~~~~~~----~g~~~-v-i~~~~~~~~~~~~~~~~~-- 253 (371)
...++++||-+|+| .|..++.+++.++ ..+|++++.+++..+.+++ .|... + +.. .+..+.+.++.
T Consensus 69 ~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~----~d~~~~l~~l~~~ 143 (232)
T 3cbg_A 69 SLTGAKQVLEIGVF-RGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRL----GPALATLEQLTQG 143 (232)
T ss_dssp HHHTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEE----SCHHHHHHHHHTS
T ss_pred HhcCCCEEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE----cCHHHHHHHHHhc
Confidence 34567899999987 7888889998874 2399999999988777654 34421 1 111 22333333332
Q ss_pred C--CCccEEEEccCC---HHHHHHHHHHhccCCceEEEEc
Q 017431 254 D--GGVDYSFECIGN---VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 254 ~--gg~dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~g 288 (371)
+ +.||+||..... ...++.+.+.|+++ |.++.-.
T Consensus 144 ~~~~~fD~V~~d~~~~~~~~~l~~~~~~Lkpg-G~lv~~~ 182 (232)
T 3cbg_A 144 KPLPEFDLIFIDADKRNYPRYYEIGLNLLRRG-GLMVIDN 182 (232)
T ss_dssp SSCCCEEEEEECSCGGGHHHHHHHHHHTEEEE-EEEEEEC
T ss_pred CCCCCcCEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEeC
Confidence 1 479999844332 35588899999997 9988653
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=95.80 E-value=0.018 Score=50.60 Aligned_cols=79 Identities=16% Similarity=0.260 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC-hhhHHH----HHhcCCcEE-e--cCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID-PKKFDR----AKNFGVTEF-V--NPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~-~~~~~~----~~~~g~~~v-i--~~~~~~~~~~~~~~~~~~-- 254 (371)
++++|||+|+ |++|.+.++.+...|+ +|++++++ ++..+. +++.+.... + |..+ .....+.+.+...
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~ 105 (271)
T 4iin_A 28 TGKNVLITGASKGIGAEIAKTLASMGL-KVWINYRSNAEVADALKNELEEKGYKAAVIKFDAAS-ESDFIEAIQTIVQSD 105 (271)
T ss_dssp SCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHhc
Confidence 5789999988 9999998888888999 88888774 443332 233444332 2 2222 1222223332221
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|++++++|.
T Consensus 106 g~id~li~nAg~ 117 (271)
T 4iin_A 106 GGLSYLVNNAGV 117 (271)
T ss_dssp SSCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 379999998884
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.80 E-value=0.037 Score=48.22 Aligned_cols=78 Identities=15% Similarity=0.191 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh---cCCcE-E--ecCCCCCchHHHHHHhh---cC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN---FGVTE-F--VNPKDHDKPIQQVLVDL---TD 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~---~g~~~-v--i~~~~~~~~~~~~~~~~---~~ 254 (371)
.++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++ .+... . .|..+ .......+.+. ..
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~~ 81 (260)
T 2qq5_A 4 NGQVCVVTGASRGIGRGIALQLCKAGA-TVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQ-ESEVRSLFEQVDREQQ 81 (260)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTS-HHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCC-HHHHHHHHHHHHHhcC
Confidence 4689999988 9999999998888999 899998887765433 22 24322 1 23332 12222333332 13
Q ss_pred CCccEEEEccC
Q 017431 255 GGVDYSFECIG 265 (371)
Q Consensus 255 gg~dvvid~~g 265 (371)
+.+|+++++.|
T Consensus 82 g~id~lvnnAg 92 (260)
T 2qq5_A 82 GRLDVLVNNAY 92 (260)
T ss_dssp TCCCEEEECCC
T ss_pred CCceEEEECCc
Confidence 57999999984
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=95.80 E-value=0.014 Score=50.58 Aligned_cols=79 Identities=27% Similarity=0.339 Sum_probs=49.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC-hhhHHHH-H---hcCCcE-E--ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID-PKKFDRA-K---NFGVTE-F--VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~-~~~~~~~-~---~~g~~~-v--i~~~~~~~~~~~~~~~~~~-- 254 (371)
++++|||+|+ |.+|.+.+..+...|+ +|++++++ +++.+.+ + +.+... . .|..+ .....+.+.+...
T Consensus 6 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 83 (258)
T 3afn_B 6 KGKRVLITGSSQGIGLATARLFARAGA-KVGLHGRKAPANIDETIASMRADGGDAAFFAADLAT-SEACQQLVDEFVAKF 83 (258)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 4689999988 9999999998888999 89888887 5544322 2 224322 1 23322 1222223332221
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|++|+++|.
T Consensus 84 g~id~vi~~Ag~ 95 (258)
T 3afn_B 84 GGIDVLINNAGG 95 (258)
T ss_dssp SSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 379999998874
|
| >3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A | Back alignment and structure |
|---|
Probab=95.79 E-value=0.02 Score=52.52 Aligned_cols=91 Identities=15% Similarity=0.123 Sum_probs=65.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
-.|++|.|+|.|.+|...++.++.+|+ +|++.+++..+.+.+++.|+..+ .++.+.+. ..|+|+.++
T Consensus 162 l~gktvGIIG~G~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~l~ell~-----~aDvV~l~~ 228 (351)
T 3jtm_A 162 LEGKTIGTVGAGRIGKLLLQRLKPFGC-NLLYHDRLQMAPELEKETGAKFV-------EDLNEMLP-----KCDVIVINM 228 (351)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGGCC-EEEEECSSCCCHHHHHHHCCEEC-------SCHHHHGG-----GCSEEEECS
T ss_pred ccCCEEeEEEeCHHHHHHHHHHHHCCC-EEEEeCCCccCHHHHHhCCCeEc-------CCHHHHHh-----cCCEEEECC
Confidence 468999999999999999999999999 89999988766677777776321 12322222 378888777
Q ss_pred CCH-H---H-HHHHHHHhccCCceEEEEcc
Q 017431 265 GNV-S---V-MRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 265 g~~-~---~-~~~~~~~l~~~~G~iv~~g~ 289 (371)
... . . -...+..|+++ ..+|.++.
T Consensus 229 Plt~~t~~li~~~~l~~mk~g-ailIN~aR 257 (351)
T 3jtm_A 229 PLTEKTRGMFNKELIGKLKKG-VLIVNNAR 257 (351)
T ss_dssp CCCTTTTTCBSHHHHHHSCTT-EEEEECSC
T ss_pred CCCHHHHHhhcHHHHhcCCCC-CEEEECcC
Confidence 631 1 1 25667778885 77777754
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=95.77 E-value=0.043 Score=47.16 Aligned_cols=73 Identities=16% Similarity=0.094 Sum_probs=48.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHhcCCcEE-ecCCCCCchHHHHHHhhcCCCccEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAA--GASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSF 261 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~--g~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~gg~dvvi 261 (371)
.+.+|||+|+ |.+|...++.+... |+ +|+++++++++.+.+ .-+...+ .|..+ . +.+.+... ++|++|
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~-~V~~~~r~~~~~~~~-~~~~~~~~~D~~d--~---~~~~~~~~-~~d~vi 74 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQGKEKI-GGEADVFIGDITD--A---DSINPAFQ-GIDALV 74 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTC-EEEEEESCHHHHHHT-TCCTTEEECCTTS--H---HHHHHHHT-TCSEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCc-EEEEEEcCCCchhhc-CCCeeEEEecCCC--H---HHHHHHHc-CCCEEE
Confidence 4678999988 99999999988888 78 899998887665433 1122222 23322 2 22333322 589999
Q ss_pred EccCC
Q 017431 262 ECIGN 266 (371)
Q Consensus 262 d~~g~ 266 (371)
++++.
T Consensus 75 ~~a~~ 79 (253)
T 1xq6_A 75 ILTSA 79 (253)
T ss_dssp ECCCC
T ss_pred Eeccc
Confidence 98773
|
| >1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2 | Back alignment and structure |
|---|
Probab=95.77 E-value=0.012 Score=51.81 Aligned_cols=94 Identities=15% Similarity=0.125 Sum_probs=64.2
Q ss_pred ccccchhhhhhhhhcCCCCCCCEEEEEcCC-hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchH
Q 017431 167 LGCGVPTGLGAVWNTAKVEPGSIVAVFGLG-TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPI 245 (371)
Q Consensus 167 ~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag-~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~ 245 (371)
+||+.......|.+...--.|++++|+|+| .+|.-+.+++...|+ .|+.+.+.. .++
T Consensus 139 ~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~t---------------------~~L 196 (288)
T 1b0a_A 139 RPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGC-TTTVTHRFT---------------------KNL 196 (288)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTC-EEEEECSSC---------------------SCH
T ss_pred CCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCC-eEEEEeCCc---------------------hhH
Confidence 444433334434444444689999999997 589999999999999 788874322 233
Q ss_pred HHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 246 QQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 246 ~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
.+.+++ +|+++.++|.+..+. -++++++ ..+|++|..
T Consensus 197 ~~~~~~-----ADIVI~Avg~p~lI~--~~~vk~G-avVIDVgi~ 233 (288)
T 1b0a_A 197 RHHVEN-----ADLLIVAVGKPGFIP--GDWIKEG-AIVIDVGIN 233 (288)
T ss_dssp HHHHHH-----CSEEEECSCCTTCBC--TTTSCTT-CEEEECCCE
T ss_pred HHHhcc-----CCEEEECCCCcCcCC--HHHcCCC-cEEEEccCC
Confidence 344433 899999999876432 2346786 888888874
|
| >4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=95.77 E-value=0.021 Score=50.26 Aligned_cols=94 Identities=17% Similarity=0.143 Sum_probs=64.4
Q ss_pred ccccchhhhhhhhhcCCCCCCCEEEEEcCC-hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchH
Q 017431 167 LGCGVPTGLGAVWNTAKVEPGSIVAVFGLG-TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPI 245 (371)
Q Consensus 167 ~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag-~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~ 245 (371)
+||+.......|.+..---.|++++|+|.| .+|..+..++...|+ .|+.+.+.. .++
T Consensus 141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gA-tVtv~hs~T---------------------~~L 198 (286)
T 4a5o_A 141 RPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGC-TVTVTHRFT---------------------RDL 198 (286)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTC-EEEEECTTC---------------------SCH
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCC---------------------cCH
Confidence 444444444444444334589999999985 599999999999999 788774321 123
Q ss_pred HHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 246 QQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 246 ~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
.+.++ .+|+++.++|.+..+. -++++++ ..++.+|..
T Consensus 199 ~~~~~-----~ADIVI~Avg~p~~I~--~~~vk~G-avVIDvgi~ 235 (286)
T 4a5o_A 199 ADHVS-----RADLVVVAAGKPGLVK--GEWIKEG-AIVIDVGIN 235 (286)
T ss_dssp HHHHH-----TCSEEEECCCCTTCBC--GGGSCTT-CEEEECCSC
T ss_pred HHHhc-----cCCEEEECCCCCCCCC--HHHcCCC-eEEEEeccc
Confidence 33333 4899999999876443 3557886 888888874
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=95.76 E-value=0.021 Score=50.04 Aligned_cols=74 Identities=18% Similarity=0.243 Sum_probs=47.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE-EecCCCCCchHHHHHHhhcC--CCccEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTD--GGVDYSF 261 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~~~~~~~~--gg~dvvi 261 (371)
+++++||+|+ |++|.+.++.+...|+ +|+++++++++ .-.+.. ..|..+ .....+.+.+... +++|+++
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~-----~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g~iD~lv 79 (264)
T 2dtx_A 7 RDKVVIVTGASMGIGRAIAERFVDEGS-KVIDLSIHDPG-----EAKYDHIECDVTN-PDQVKASIDHIFKEYGSISVLV 79 (264)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSCCC-----SCSSEEEECCTTC-HHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEecCccc-----CCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 4689999988 9999999999989999 89998887664 111111 123332 1222223332221 3699999
Q ss_pred EccCC
Q 017431 262 ECIGN 266 (371)
Q Consensus 262 d~~g~ 266 (371)
+++|.
T Consensus 80 ~~Ag~ 84 (264)
T 2dtx_A 80 NNAGI 84 (264)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 98873
|
| >3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* | Back alignment and structure |
|---|
Probab=95.76 E-value=0.079 Score=47.73 Aligned_cols=91 Identities=18% Similarity=0.251 Sum_probs=63.6
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHHhcCCc-EEecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~-~v~~v~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
.+|.|+|+|.+|.+.++.++..|.. .|++.++++++.+.+.++|.. ......+ +. .+ ...|+||-|+.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~---~~--~~-----~~aDvVilavp 103 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIA---KV--ED-----FSPDFVMLSSP 103 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTT---GG--GG-----GCCSEEEECSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHH---HH--hh-----ccCCEEEEeCC
Confidence 5899999999999999999988864 799999999999888888863 2221111 10 01 25899999988
Q ss_pred CHH---HHHHHHHHhccCCceEEEEcc
Q 017431 266 NVS---VMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 266 ~~~---~~~~~~~~l~~~~G~iv~~g~ 289 (371)
... .+..+...+.++ ..++.+++
T Consensus 104 ~~~~~~vl~~l~~~l~~~-~iv~d~~S 129 (314)
T 3ggo_A 104 VRTFREIAKKLSYILSED-ATVTDQGS 129 (314)
T ss_dssp GGGHHHHHHHHHHHSCTT-CEEEECCS
T ss_pred HHHHHHHHHHHhhccCCC-cEEEECCC
Confidence 743 244445556664 66666654
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=95.75 E-value=0.016 Score=50.59 Aligned_cols=68 Identities=13% Similarity=0.130 Sum_probs=48.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
++ +++|+|+|++|.+++..+...|+++|+++.++.++.+.+. +++. ... .+..+.+. .+|+|++|+
T Consensus 108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~---~~~----~~~~~~~~-----~aDiVInat 174 (253)
T 3u62_A 108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKI---FSL----DQLDEVVK-----KAKSLFNTT 174 (253)
T ss_dssp CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEE---EEG----GGHHHHHH-----TCSEEEECS
T ss_pred CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHccc---CCH----HHHHhhhc-----CCCEEEECC
Confidence 56 9999999999999999999999988999999887755432 2321 111 12222221 589999988
Q ss_pred CC
Q 017431 265 GN 266 (371)
Q Consensus 265 g~ 266 (371)
+.
T Consensus 175 p~ 176 (253)
T 3u62_A 175 SV 176 (253)
T ss_dssp ST
T ss_pred CC
Confidence 63
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=95.74 E-value=0.03 Score=49.84 Aligned_cols=39 Identities=23% Similarity=0.216 Sum_probs=33.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhhHH
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFD 225 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~-~~~~~~~ 225 (371)
.++++||+|+ |++|.+.++.+...|+ +|++++ +++++.+
T Consensus 8 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~r~~~~~~ 48 (291)
T 1e7w_A 8 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEAN 48 (291)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEcCCCHHHHH
Confidence 4689999988 9999999999888999 899988 8876654
|
| >1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7 | Back alignment and structure |
|---|
Probab=95.74 E-value=0.0086 Score=51.17 Aligned_cols=95 Identities=17% Similarity=0.203 Sum_probs=65.7
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCC------CeEEEEcCChhhHHHHHhc----C-------CcEEecCCCCCchH
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAGA------SRVIGIDIDPKKFDRAKNF----G-------VTEFVNPKDHDKPI 245 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~------~~v~~v~~~~~~~~~~~~~----g-------~~~vi~~~~~~~~~ 245 (371)
.++++++||-+|+|. |..+..+++..+. .+|++++.+++..+.+++. + ...++.. + .
T Consensus 81 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~-d----~ 154 (227)
T 1r18_A 81 HLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEG-D----G 154 (227)
T ss_dssp TCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEES-C----G
T ss_pred hCCCCCEEEEECCCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEEC-C----c
Confidence 478899999999975 8888888887663 3899999999877766542 1 1122211 1 1
Q ss_pred HHHHHhhcC-CCccEEEEccCCHHHHHHHHHHhccCCceEEEE
Q 017431 246 QQVLVDLTD-GGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 246 ~~~~~~~~~-gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
.+ .... +.||+|+....-....+.+.+.|+++ |+++..
T Consensus 155 ~~---~~~~~~~fD~I~~~~~~~~~~~~~~~~Lkpg-G~lvi~ 193 (227)
T 1r18_A 155 RK---GYPPNAPYNAIHVGAAAPDTPTELINQLASG-GRLIVP 193 (227)
T ss_dssp GG---CCGGGCSEEEEEECSCBSSCCHHHHHTEEEE-EEEEEE
T ss_pred cc---CCCcCCCccEEEECCchHHHHHHHHHHhcCC-CEEEEE
Confidence 00 1112 37999998766656678899999997 998765
|
| >3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A* | Back alignment and structure |
|---|
Probab=95.72 E-value=0.059 Score=48.34 Aligned_cols=100 Identities=15% Similarity=0.195 Sum_probs=68.2
Q ss_pred hcCC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCc---EEecCCCCCchHHHHHHh
Q 017431 180 NTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT---EFVNPKDHDKPIQQVLVD 251 (371)
Q Consensus 180 ~~~~-~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~---~vi~~~~~~~~~~~~~~~ 251 (371)
.... +.++++||-+|+|. |..+..+++..|+ +|++++.+++..+.+++ .|.. .++...- .++ .
T Consensus 110 ~~l~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~--~~~-----~ 180 (312)
T 3vc1_A 110 DHLGQAGPDDTLVDAGCGR-GGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNM--LDT-----P 180 (312)
T ss_dssp TTSCCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT--TSC-----C
T ss_pred HHhccCCCCCEEEEecCCC-CHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECCh--hcC-----C
Confidence 4444 78999999998863 7777888887787 89999999987776654 3432 2221111 000 0
Q ss_pred hcCCCccEEEEc-----cCCHHHHHHHHHHhccCCceEEEEcc
Q 017431 252 LTDGGVDYSFEC-----IGNVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 252 ~~~gg~dvvid~-----~g~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
...+.||+|+.. .+-...++.+.+.|+++ |+++....
T Consensus 181 ~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~Lkpg-G~l~~~~~ 222 (312)
T 3vc1_A 181 FDKGAVTASWNNESTMYVDLHDLFSEHSRFLKVG-GRYVTITG 222 (312)
T ss_dssp CCTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred CCCCCEeEEEECCchhhCCHHHHHHHHHHHcCCC-cEEEEEEc
Confidence 112479999863 22356789999999997 99987754
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=95.72 E-value=0.019 Score=50.59 Aligned_cols=94 Identities=22% Similarity=0.206 Sum_probs=63.9
Q ss_pred ccccchhhhhhhhhcCCCCCCCEEEEEcCC-hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchH
Q 017431 167 LGCGVPTGLGAVWNTAKVEPGSIVAVFGLG-TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPI 245 (371)
Q Consensus 167 ~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag-~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~ 245 (371)
+||+.......|.+..---.|++++|+|+| .+|..+..++...|+ .|+.+.+.. .++
T Consensus 140 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gA-tVtv~h~~t---------------------~~L 197 (285)
T 3p2o_A 140 LPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGA-TVSVCHIKT---------------------KDL 197 (285)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC---------------------SCH
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCc---------------------hhH
Confidence 343333344444444444689999999985 589999999999999 788875421 122
Q ss_pred HHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 246 QQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 246 ~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
.+.++ .+|+++.++|.+..+. -++++++ ..+|.+|..
T Consensus 198 ~~~~~-----~ADIVI~Avg~p~~I~--~~~vk~G-avVIDVgi~ 234 (285)
T 3p2o_A 198 SLYTR-----QADLIIVAAGCVNLLR--SDMVKEG-VIVVDVGIN 234 (285)
T ss_dssp HHHHT-----TCSEEEECSSCTTCBC--GGGSCTT-EEEEECCCE
T ss_pred HHHhh-----cCCEEEECCCCCCcCC--HHHcCCC-eEEEEeccC
Confidence 22222 4899999999876432 3557885 888888864
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=95.71 E-value=0.022 Score=51.54 Aligned_cols=80 Identities=26% Similarity=0.312 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC----------hhhHH----HHHhcCCcEEecCCCC-Cc-hHHHH
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID----------PKKFD----RAKNFGVTEFVNPKDH-DK-PIQQV 248 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~----------~~~~~----~~~~~g~~~vi~~~~~-~~-~~~~~ 248 (371)
.|+++||+|+ +++|.+.+..+...|+ +|++++++ .++.+ .+++.+....+...+. +. ...+.
T Consensus 26 ~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~ 104 (322)
T 3qlj_A 26 DGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL 104 (322)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence 5789999988 9999999988888899 89998876 33322 2233454333222221 12 22222
Q ss_pred HHhhcC--CCccEEEEccCC
Q 017431 249 LVDLTD--GGVDYSFECIGN 266 (371)
Q Consensus 249 ~~~~~~--gg~dvvid~~g~ 266 (371)
+.+... +++|++++++|.
T Consensus 105 ~~~~~~~~g~iD~lv~nAg~ 124 (322)
T 3qlj_A 105 IQTAVETFGGLDVLVNNAGI 124 (322)
T ss_dssp HHHHHHHHSCCCEEECCCCC
T ss_pred HHHHHHHcCCCCEEEECCCC
Confidence 222221 379999998884
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=95.71 E-value=0.0036 Score=56.39 Aligned_cols=98 Identities=14% Similarity=0.190 Sum_probs=61.3
Q ss_pred CCCCCEEEEEcCC-hHHHHHHHHHHHcCCCeEEEEcCChhhH-HHHHhcCCc-EEe-cCC-CCCchHHHHHHhhcCCCcc
Q 017431 184 VEPGSIVAVFGLG-TVGLAVAEGAKAAGASRVIGIDIDPKKF-DRAKNFGVT-EFV-NPK-DHDKPIQQVLVDLTDGGVD 258 (371)
Q Consensus 184 ~~~g~~VlI~Gag-~vG~~ai~la~~~g~~~v~~v~~~~~~~-~~~~~~g~~-~vi-~~~-~~~~~~~~~~~~~~~gg~d 258 (371)
--.|++++|+|+| .+|..+++++...|+ .|++++++..+. ++..+++.. +.. ... ....+..+.++ .+|
T Consensus 174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gA-tVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~-----~AD 247 (320)
T 1edz_A 174 RLYGKKCIVINRSEIVGRPLAALLANDGA-TVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSL-----DSD 247 (320)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSC-EEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHH-----HCS
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHCCC-EEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhc-----cCC
Confidence 3478999999997 579999999999999 788887764322 122233321 000 000 00023444443 399
Q ss_pred EEEEccCCHHH-HHHHHHHhccCCceEEEEccC
Q 017431 259 YSFECIGNVSV-MRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 259 vvid~~g~~~~-~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+|+.++|.+.. +.. +.++++ ..++++|..
T Consensus 248 IVIsAtg~p~~vI~~--e~vk~G-avVIDVgi~ 277 (320)
T 1edz_A 248 VVITGVPSENYKFPT--EYIKEG-AVCINFACT 277 (320)
T ss_dssp EEEECCCCTTCCBCT--TTSCTT-EEEEECSSS
T ss_pred EEEECCCCCcceeCH--HHcCCC-eEEEEcCCC
Confidence 99999999653 222 336775 788888774
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=95.71 E-value=0.048 Score=54.04 Aligned_cols=102 Identities=20% Similarity=0.246 Sum_probs=59.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC---------ChhhHH----HHHhcCCcEEecCCCCCchHHHHHHh
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI---------DPKKFD----RAKNFGVTEFVNPKDHDKPIQQVLVD 251 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~---------~~~~~~----~~~~~g~~~vi~~~~~~~~~~~~~~~ 251 (371)
.|+++||+|+ +++|.+.+..+...|+ +|+++++ +.++.+ .+++.+...+.+..+. .+..+.+.+
T Consensus 18 ~gk~~lVTGas~GIG~aiA~~La~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~-~~~~~~~~~ 95 (613)
T 3oml_A 18 DGRVAVVTGAGAGLGREYALLFAERGA-KVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSV-IDGAKVIET 95 (613)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEC--------------CHHHHHHHHHHTTCCEEECCCCG-GGHHHHHC-
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCH-HHHHHHHHH
Confidence 4789999988 8999998888888899 8888765 333322 2334555555665552 333334443
Q ss_pred hcC--CCccEEEEccCCH-------------------------HHHHHHHHHhcc-CCceEEEEcc
Q 017431 252 LTD--GGVDYSFECIGNV-------------------------SVMRAALECCHK-GWGTSVIVGV 289 (371)
Q Consensus 252 ~~~--gg~dvvid~~g~~-------------------------~~~~~~~~~l~~-~~G~iv~~g~ 289 (371)
... +.+|++++++|.. .+.+.++..|.. ++|+||.+++
T Consensus 96 ~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS 161 (613)
T 3oml_A 96 AIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSS 161 (613)
T ss_dssp ---------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred HHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 333 2799999988841 124455555543 2389998876
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=95.71 E-value=0.077 Score=46.46 Aligned_cols=79 Identities=19% Similarity=0.181 Sum_probs=47.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhhHHH-H---HhcCCcE-E--ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFDR-A---KNFGVTE-F--VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~-~~~~~~~~-~---~~~g~~~-v--i~~~~~~~~~~~~~~~~~~-- 254 (371)
+++++||+|+ |++|.+.++.+...|+ +|++++ ++.++.+. + ++.+... . .|..+ .....+.+.+...
T Consensus 24 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~ 101 (269)
T 3gk3_A 24 AKRVAFVTGGMGGLGAAISRRLHDAGM-AVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVAD-FESCERCAEKVLADF 101 (269)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred cCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHc
Confidence 5688999988 9999999888888899 788876 44443322 1 2233322 2 23332 1222222222221
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|++++++|.
T Consensus 102 g~id~li~nAg~ 113 (269)
T 3gk3_A 102 GKVDVLINNAGI 113 (269)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 379999998874
|
| >1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A* | Back alignment and structure |
|---|
Probab=95.70 E-value=0.046 Score=43.94 Aligned_cols=99 Identities=18% Similarity=0.223 Sum_probs=62.3
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcC-CCccEEE
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTD-GGVDYSF 261 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~-gg~dvvi 261 (371)
+.++++||-+|+|. |..+..+++..|. .++++++.++ ..+. ....++...-.+....+.+..... +.+|+|+
T Consensus 20 ~~~~~~vLd~G~G~-G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~ 93 (180)
T 1ej0_A 20 FKPGMTVVDLGAAP-GGWSQYVVTQIGGKGRIIACDLLP-MDPI----VGVDFLQGDFRDELVMKALLERVGDSKVQVVM 93 (180)
T ss_dssp CCTTCEEEEESCTT-CHHHHHHHHHHCTTCEEEEEESSC-CCCC----TTEEEEESCTTSHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCCeEEEeCCCC-CHHHHHHHHHhCCCCeEEEEECcc-cccc----CcEEEEEcccccchhhhhhhccCCCCceeEEE
Confidence 67889999999976 8888888888642 3999998877 3221 111222222111222222333223 4899999
Q ss_pred E-----ccCC------------HHHHHHHHHHhccCCceEEEEcc
Q 017431 262 E-----CIGN------------VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 262 d-----~~g~------------~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
. ..+. ...++.+.+.|+++ |.++....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~ 137 (180)
T 1ej0_A 94 SDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPG-GSFVVKVF 137 (180)
T ss_dssp ECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred ECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 7 3333 35688889999997 99887544
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.70 E-value=0.025 Score=50.16 Aligned_cols=79 Identities=22% Similarity=0.259 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhc--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~--~g 255 (371)
.+++|||+|+ |.+|.+.++.+...|+ +|+++++++++.+.+ ++.+.... .|..+ .....+.+.+.. .+
T Consensus 43 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~~~ 120 (285)
T 2c07_A 43 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSK-KEEISEVINKILTEHK 120 (285)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTC-HHHHHHHHHHHHHHCS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCC-HHHHHHHHHHHHHhcC
Confidence 4679999988 9999999988888899 888888777654432 22344322 23332 122223332221 23
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|++|+++|.
T Consensus 121 ~id~li~~Ag~ 131 (285)
T 2c07_A 121 NVDILVNNAGI 131 (285)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999998874
|
| >3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=95.69 E-value=0.033 Score=51.10 Aligned_cols=90 Identities=19% Similarity=0.182 Sum_probs=63.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
-.|++|.|+|.|.+|...++.++.+|+ +|++.+++. +.+.+.+.|+.. . .++.+.+.+ .|+|+-++
T Consensus 158 l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~~~~~g~~~-~------~~l~ell~~-----aDiV~l~~ 223 (352)
T 3gg9_A 158 LKGQTLGIFGYGKIGQLVAGYGRAFGM-NVLVWGREN-SKERARADGFAV-A------ESKDALFEQ-----SDVLSVHL 223 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSHH-HHHHHHHTTCEE-C------SSHHHHHHH-----CSEEEECC
T ss_pred CCCCEEEEEeECHHHHHHHHHHHhCCC-EEEEECCCC-CHHHHHhcCceE-e------CCHHHHHhh-----CCEEEEec
Confidence 368899999999999999999999999 999998775 345556677632 1 123333333 78888776
Q ss_pred CCH-H---H-HHHHHHHhccCCceEEEEcc
Q 017431 265 GNV-S---V-MRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 265 g~~-~---~-~~~~~~~l~~~~G~iv~~g~ 289 (371)
... . . -...+..|+++ ..+|.++.
T Consensus 224 Plt~~t~~li~~~~l~~mk~g-ailIN~aR 252 (352)
T 3gg9_A 224 RLNDETRSIITVADLTRMKPT-ALFVNTSR 252 (352)
T ss_dssp CCSTTTTTCBCHHHHTTSCTT-CEEEECSC
T ss_pred cCcHHHHHhhCHHHHhhCCCC-cEEEECCC
Confidence 531 1 1 23567778886 88887763
|
| >3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A* | Back alignment and structure |
|---|
Probab=95.69 E-value=0.0023 Score=52.80 Aligned_cols=99 Identities=17% Similarity=0.237 Sum_probs=64.6
Q ss_pred cCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCc--EEecCCCCCchHHHHHHhhcC
Q 017431 181 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT--EFVNPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 181 ~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~--~vi~~~~~~~~~~~~~~~~~~ 254 (371)
...++++++||=+|+|. |..+..+++. +. +|++++.+++..+.+++ .+.. .++. .+ . ..+....+
T Consensus 17 ~~~~~~~~~vLDiGcG~-G~~~~~la~~-~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~-~~--~---~~l~~~~~ 87 (185)
T 3mti_A 17 AEVLDDESIVVDATMGN-GNDTAFLAGL-SK-KVYAFDVQEQALGKTSQRLSDLGIENTELIL-DG--H---ENLDHYVR 87 (185)
T ss_dssp HTTCCTTCEEEESCCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHHTCCCEEEEE-SC--G---GGGGGTCC
T ss_pred HHhCCCCCEEEEEcCCC-CHHHHHHHHh-CC-EEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-Cc--H---HHHHhhcc
Confidence 34577899999888863 7777788877 66 99999999987776653 3432 2222 21 1 11122233
Q ss_pred CCccEEEEccCC-----------H----HHHHHHHHHhccCCceEEEEcc
Q 017431 255 GGVDYSFECIGN-----------V----SVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 255 gg~dvvid~~g~-----------~----~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
+.||+|+...+. + ..++.+.+.|+++ |+++.+..
T Consensus 88 ~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~ 136 (185)
T 3mti_A 88 EPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVG-GRLAIMIY 136 (185)
T ss_dssp SCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred CCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCC-cEEEEEEe
Confidence 479998865321 1 3458888999997 99887643
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=95.68 E-value=0.1 Score=45.35 Aligned_cols=35 Identities=31% Similarity=0.370 Sum_probs=30.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
+.+|+|+|+|++|..++..+...|.++++.++.+.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 57999999999999999999999998999987653
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=95.68 E-value=0.014 Score=52.98 Aligned_cols=75 Identities=19% Similarity=0.286 Sum_probs=48.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhH--HHHHhcCC---cEEe--cCCCCCchHHHHHHhhcCC-C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKF--DRAKNFGV---TEFV--NPKDHDKPIQQVLVDLTDG-G 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~--~~~~~~g~---~~vi--~~~~~~~~~~~~~~~~~~g-g 256 (371)
++.+|||+|+ |.+|...++.+...|+ +|+++++++++. +.+++++. ...+ |..+ . +.+.+...+ +
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~---~~~~~~~~~~~ 75 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGY-EVYGADRRSGEFASWRLKELGIENDVKIIHMDLLE--F---SNIIRTIEKVQ 75 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTC--H---HHHHHHHHHHC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCCcccccccHhhccccCceeEEECCCCC--H---HHHHHHHHhcC
Confidence 3578999988 9999999988888899 899998876542 23344421 1122 2222 1 222232223 6
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|+||++++.
T Consensus 76 ~d~vih~A~~ 85 (345)
T 2z1m_A 76 PDEVYNLAAQ 85 (345)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999999874
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=95.65 E-value=0.082 Score=49.49 Aligned_cols=97 Identities=12% Similarity=0.090 Sum_probs=62.3
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCC--CeEEEEcCChhhHHHH-HhcC------CcE-EecCCCCCchHHHHHHhhcCCCc
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGA--SRVIGIDIDPKKFDRA-KNFG------VTE-FVNPKDHDKPIQQVLVDLTDGGV 257 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~--~~v~~v~~~~~~~~~~-~~~g------~~~-vi~~~~~~~~~~~~~~~~~~gg~ 257 (371)
.+|+|+|+|.+|...++.+...|. ..|++++++.++.+.+ ++++ ... .+|..+ ..++.+.+.+. ++
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d-~~~l~~~l~~~---~~ 77 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADS-IEELVALINEV---KP 77 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTC-HHHHHHHHHHH---CC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCC-HHHHHHHHHhh---CC
Confidence 379999999999999988887773 4889999998876544 3332 211 223222 12233333222 68
Q ss_pred cEEEEccCCHHHHHHHHHHhccCCceEEEEcc
Q 017431 258 DYSFECIGNVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 258 dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
|+|+++++.......+..++..+ -.++.+..
T Consensus 78 DvVin~ag~~~~~~v~~a~l~~g-~~vvD~a~ 108 (405)
T 4ina_A 78 QIVLNIALPYQDLTIMEACLRTG-VPYLDTAN 108 (405)
T ss_dssp SEEEECSCGGGHHHHHHHHHHHT-CCEEESSC
T ss_pred CEEEECCCcccChHHHHHHHHhC-CCEEEecC
Confidence 99999998754455666677775 66666544
|
| >3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A* | Back alignment and structure |
|---|
Probab=95.65 E-value=0.11 Score=48.46 Aligned_cols=110 Identities=15% Similarity=0.160 Sum_probs=69.8
Q ss_pred hhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-----------hcCC--cE--EecCC
Q 017431 175 LGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-----------NFGV--TE--FVNPK 239 (371)
Q Consensus 175 ~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-----------~~g~--~~--vi~~~ 239 (371)
+..+....++.++++||=+|+| .|..++++|+..|+.+|++++.+++-.++++ .+|. .. ++..+
T Consensus 162 i~~il~~l~l~~gd~VLDLGCG-tG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD 240 (438)
T 3uwp_A 162 VAQMIDEIKMTDDDLFVDLGSG-VGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGD 240 (438)
T ss_dssp HHHHHHHHCCCTTCEEEEESCT-TSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECC
T ss_pred HHHHHHhcCCCCCCEEEEeCCC-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECc
Confidence 3345667789999999988886 5778888888889867999999986544443 2343 22 22222
Q ss_pred CCCchHHHHHHhhcCCCccEEEEccC--C---HHHHHHHHHHhccCCceEEEEccCC
Q 017431 240 DHDKPIQQVLVDLTDGGVDYSFECIG--N---VSVMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~gg~dvvid~~g--~---~~~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
-.+..+...+ ..+|+|+...- . ...+...++.|++| |++|......
T Consensus 241 ~~~lp~~d~~-----~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPG-GrIVssE~f~ 291 (438)
T 3uwp_A 241 FLSEEWRERI-----ANTSVIFVNNFAFGPEVDHQLKERFANMKEG-GRIVSSKPFA 291 (438)
T ss_dssp TTSHHHHHHH-----HTCSEEEECCTTCCHHHHHHHHHHHTTSCTT-CEEEESSCSS
T ss_pred ccCCcccccc-----CCccEEEEcccccCchHHHHHHHHHHcCCCC-cEEEEeeccc
Confidence 1112221111 15899984211 1 23466777889997 9999876543
|
| >4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A* | Back alignment and structure |
|---|
Probab=95.65 E-value=0.018 Score=52.34 Aligned_cols=89 Identities=16% Similarity=0.250 Sum_probs=62.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
.|++|.|+|.|.+|...++.++.+|+ +|++.+++.++.+...++|... .++.+.+. ..|+|+-++.
T Consensus 144 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~--------~~l~ell~-----~aDvV~l~~P 209 (330)
T 4e5n_A 144 DNATVGFLGMGAIGLAMADRLQGWGA-TLQYHEAKALDTQTEQRLGLRQ--------VACSELFA-----SSDFILLALP 209 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHTTTSCC-EEEEECSSCCCHHHHHHHTEEE--------CCHHHHHH-----HCSEEEECCC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCCCcHhHHHhcCcee--------CCHHHHHh-----hCCEEEEcCC
Confidence 68899999999999999999999999 8999998875555666666521 12333332 2678877765
Q ss_pred CH----HHH-HHHHHHhccCCceEEEEcc
Q 017431 266 NV----SVM-RAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 266 ~~----~~~-~~~~~~l~~~~G~iv~~g~ 289 (371)
.. +.+ ...+..|+++ ..+|.++.
T Consensus 210 ~t~~t~~li~~~~l~~mk~g-ailIN~ar 237 (330)
T 4e5n_A 210 LNADTLHLVNAELLALVRPG-ALLVNPCR 237 (330)
T ss_dssp CSTTTTTCBCHHHHTTSCTT-EEEEECSC
T ss_pred CCHHHHHHhCHHHHhhCCCC-cEEEECCC
Confidence 31 112 3566777775 77776654
|
| >1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=95.65 E-value=0.023 Score=50.07 Aligned_cols=102 Identities=14% Similarity=0.139 Sum_probs=67.7
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHhc-----CCcEE-ecCCCCCchHHHHH
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAA--GASRVIGIDIDPKKFDRAKNF-----GVTEF-VNPKDHDKPIQQVL 249 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~--g~~~v~~v~~~~~~~~~~~~~-----g~~~v-i~~~~~~~~~~~~~ 249 (371)
+.....+.++++||-+|+| .|..+..+++.. +. +|++++.+++..+.+++. |...+ +...+ +.+
T Consensus 102 ~~~~~~~~~~~~VLD~G~G-~G~~~~~la~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d----~~~-- 173 (275)
T 1yb2_A 102 IIMRCGLRPGMDILEVGVG-SGNMSSYILYALNGKG-TLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSD----IAD-- 173 (275)
T ss_dssp ----CCCCTTCEEEEECCT-TSHHHHHHHHHHTTSS-EEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSC----TTT--
T ss_pred HHHHcCCCCcCEEEEecCC-CCHHHHHHHHHcCCCC-EEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECc----hhc--
Confidence 3455678899999999887 577777888874 45 999999999887776542 53221 21212 111
Q ss_pred HhhcCCCccEEEEccCCH-HHHHHHHHHhccCCceEEEEcc
Q 017431 250 VDLTDGGVDYSFECIGNV-SVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 250 ~~~~~gg~dvvid~~g~~-~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
....+.||+|+.....+ ..++.+.+.|+++ |+++....
T Consensus 174 -~~~~~~fD~Vi~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~ 212 (275)
T 1yb2_A 174 -FISDQMYDAVIADIPDPWNHVQKIASMMKPG-SVATFYLP 212 (275)
T ss_dssp -CCCSCCEEEEEECCSCGGGSHHHHHHTEEEE-EEEEEEES
T ss_pred -cCcCCCccEEEEcCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence 11123799999766553 5688999999997 99887754
|
| >1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21 | Back alignment and structure |
|---|
Probab=95.63 E-value=0.026 Score=48.84 Aligned_cols=100 Identities=20% Similarity=0.288 Sum_probs=68.0
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCc---EEecCCCCCchHHHHHH
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT---EFVNPKDHDKPIQQVLV 250 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~---~vi~~~~~~~~~~~~~~ 250 (371)
+.....+.++.+||-+|+|. |..+..+++..|+ +|++++.+++..+.+++ .|.. .++...- .++
T Consensus 28 l~~~~~~~~~~~VLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~--~~~----- 98 (256)
T 1nkv_A 28 LGRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDA--AGY----- 98 (256)
T ss_dssp HHHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCC--TTC-----
T ss_pred HHHhcCCCCCCEEEEECCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECCh--HhC-----
Confidence 34556688999999999875 7788889988888 89999999987766643 3432 1221111 010
Q ss_pred hhcCCCccEEEEcc------CCHHHHHHHHHHhccCCceEEEEc
Q 017431 251 DLTDGGVDYSFECI------GNVSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 251 ~~~~gg~dvvid~~------g~~~~~~~~~~~l~~~~G~iv~~g 288 (371)
..++.||+|+... .....++.+.+.|+++ |+++...
T Consensus 99 -~~~~~fD~V~~~~~~~~~~~~~~~l~~~~r~Lkpg-G~l~~~~ 140 (256)
T 1nkv_A 99 -VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPG-GIMLIGE 140 (256)
T ss_dssp -CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE-EEEEEEE
T ss_pred -CcCCCCCEEEECCChHhcCCHHHHHHHHHHHcCCC-eEEEEec
Confidence 0123799999621 2345688899999997 9988764
|
| >1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A* | Back alignment and structure |
|---|
Probab=95.63 E-value=0.02 Score=50.76 Aligned_cols=94 Identities=18% Similarity=0.147 Sum_probs=62.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcC-----C---------cEE-ecCCCCCchHHHHH
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG-----V---------TEF-VNPKDHDKPIQQVL 249 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g-----~---------~~v-i~~~~~~~~~~~~~ 249 (371)
.++.+||++|+| .|..+..+++. +..+|++++.+++..+.+++.- . ..+ +.. .+..+.+
T Consensus 74 ~~~~~VLdiG~G-~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~----~D~~~~l 147 (281)
T 1mjf_A 74 PKPKRVLVIGGG-DGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTI----GDGFEFI 147 (281)
T ss_dssp SCCCEEEEEECT-TSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEE----SCHHHHH
T ss_pred CCCCeEEEEcCC-cCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEE----CchHHHh
Confidence 356899999886 35666677777 7669999999999888877532 1 111 111 2222333
Q ss_pred HhhcCCCccEEEEccC----------CHHHHHHHHHHhccCCceEEEE
Q 017431 250 VDLTDGGVDYSFECIG----------NVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 250 ~~~~~gg~dvvid~~g----------~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
.. .+.||+|+.... ....++.+.+.|+++ |.++..
T Consensus 148 ~~--~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pg-G~lv~~ 192 (281)
T 1mjf_A 148 KN--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNP-GIYVTQ 192 (281)
T ss_dssp HH--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEE-EEEEEE
T ss_pred cc--cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEE
Confidence 33 348998884332 245688999999997 998875
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=95.61 E-value=0.076 Score=50.51 Aligned_cols=79 Identities=25% Similarity=0.376 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhH---HHHHhcCCcEE-ecCCCCCchHHHHHH---hhcCCCc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKF---DRAKNFGVTEF-VNPKDHDKPIQQVLV---DLTDGGV 257 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~---~~~~~~g~~~v-i~~~~~~~~~~~~~~---~~~~gg~ 257 (371)
+++++||+|+ |++|.+.++.+...|+ +|+.+++++... +...+.+...+ .|..+ .......+. +..++.+
T Consensus 212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga-~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd-~~~v~~~~~~~~~~~g~~i 289 (454)
T 3u0b_A 212 DGKVAVVTGAARGIGATIAEVFARDGA-TVVAIDVDGAAEDLKRVADKVGGTALTLDVTA-DDAVDKITAHVTEHHGGKV 289 (454)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECGGGHHHHHHHHHHHTCEEEECCTTS-TTHHHHHHHHHHHHSTTCC
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEecCC-HHHHHHHHHHHHHHcCCCc
Confidence 6789999987 9999998888888899 888888764332 23345555332 33333 123333333 2222249
Q ss_pred cEEEEccCC
Q 017431 258 DYSFECIGN 266 (371)
Q Consensus 258 dvvid~~g~ 266 (371)
|+++++.|.
T Consensus 290 d~lV~nAGv 298 (454)
T 3u0b_A 290 DILVNNAGI 298 (454)
T ss_dssp SEEEECCCC
T ss_pred eEEEECCcc
Confidence 999998875
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=95.59 E-value=0.033 Score=47.93 Aligned_cols=79 Identities=20% Similarity=0.248 Sum_probs=47.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHHH----HHhcCCcEE---ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDR----AKNFGVTEF---VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v-~~~~~~~~~----~~~~g~~~v---i~~~~~~~~~~~~~~~~~~-- 254 (371)
++++|||+|+ |.+|.+.++.+...|+ +|+++ .+++++.+. +++.+.... .|..+ .....+.+.+...
T Consensus 4 ~~~~vlItGasggiG~~~a~~l~~~G~-~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 81 (247)
T 2hq1_A 4 KGKTAIVTGSSRGLGKAIAWKLGNMGA-NIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKN-PEDVENMVKTAMDAF 81 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTS-HHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHhc
Confidence 4689999988 9999999998888999 88887 555554332 223343322 23322 1222222222211
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|++++++|.
T Consensus 82 ~~~d~vi~~Ag~ 93 (247)
T 2hq1_A 82 GRIDILVNNAGI 93 (247)
T ss_dssp SCCCEEEECC--
T ss_pred CCCCEEEECCCC
Confidence 379999998874
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=95.59 E-value=0.058 Score=47.82 Aligned_cols=73 Identities=19% Similarity=0.271 Sum_probs=52.7
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHH
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 268 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~ 268 (371)
+|.|+|+|.+|....+.+...|. +|++.++++++.+.+.+.|+.. . .+..+.+. ..|+||-|+..+.
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~-~------~~~~~~~~-----~advvi~~v~~~~ 69 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGF-DVTVWNRNPAKCAPLVALGARQ-A------SSPAEVCA-----ACDITIAMLADPA 69 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTC-CEEEECSSGGGGHHHHHHTCEE-C------SCHHHHHH-----HCSEEEECCSSHH
T ss_pred eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCee-c------CCHHHHHH-----cCCEEEEEcCCHH
Confidence 58899999999988888778898 8999999999988887777531 1 12223332 3788888888764
Q ss_pred HHHHHH
Q 017431 269 VMRAAL 274 (371)
Q Consensus 269 ~~~~~~ 274 (371)
.++..+
T Consensus 70 ~~~~v~ 75 (287)
T 3pdu_A 70 AAREVC 75 (287)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 455544
|
| >1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
Probab=95.58 E-value=0.039 Score=49.91 Aligned_cols=90 Identities=13% Similarity=0.212 Sum_probs=63.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~-~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
-.|++|.|+|.|.+|...++.++.+|+ +|++.++ +.++ +.+.++|+.. . .+..+.+. ..|+|+.+
T Consensus 144 l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~~g~~~-~------~~l~ell~-----~aDvVil~ 209 (320)
T 1gdh_A 144 LDNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASS-SDEASYQATF-H------DSLDSLLS-----VSQFFSLN 209 (320)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCH-HHHHHHTCEE-C------SSHHHHHH-----HCSEEEEC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcCh-hhhhhcCcEE-c------CCHHHHHh-----hCCEEEEe
Confidence 468899999999999999999999999 8999998 7765 3455677631 1 12333332 37888887
Q ss_pred cCCHH----HH-HHHHHHhccCCceEEEEcc
Q 017431 264 IGNVS----VM-RAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 264 ~g~~~----~~-~~~~~~l~~~~G~iv~~g~ 289 (371)
+.... .+ ...+..|+++ +.+|.++.
T Consensus 210 ~p~~~~t~~~i~~~~l~~mk~g-ailIn~ar 239 (320)
T 1gdh_A 210 APSTPETRYFFNKATIKSLPQG-AIVVNTAR 239 (320)
T ss_dssp CCCCTTTTTCBSHHHHTTSCTT-EEEEECSC
T ss_pred ccCchHHHhhcCHHHHhhCCCC-cEEEECCC
Confidence 76421 12 3466778885 77777755
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.57 E-value=0.036 Score=50.28 Aligned_cols=40 Identities=23% Similarity=0.206 Sum_probs=33.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhhHHH
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFDR 226 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~-~~~~~~~~ 226 (371)
.++++||+|+ |++|.+.++.+...|+ +|++++ +++++.+.
T Consensus 45 ~~k~~lVTGas~GIG~aia~~La~~G~-~Vv~~~~r~~~~~~~ 86 (328)
T 2qhx_A 45 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANA 86 (328)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHH
Confidence 4689999988 9999999999989999 898888 88766543
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=95.55 E-value=0.0061 Score=53.98 Aligned_cols=71 Identities=7% Similarity=0.053 Sum_probs=48.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
-.+++++|+|+|++|.+++..+...|+++|+++.++.++.+.+.+ .. ... .+. .+.+.. ..+|+|++|+
T Consensus 115 l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~-~~-~~~-------~~~-~~~~~~-~~aDiVInaT 183 (277)
T 3don_A 115 IEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSL-NI-NKI-------NLS-HAESHL-DEFDIIINTT 183 (277)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS-CC-EEE-------CHH-HHHHTG-GGCSEEEECC
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-hc-ccc-------cHh-hHHHHh-cCCCEEEECc
Confidence 357899999999999999999999999889999998876543322 11 111 122 122211 2699999998
Q ss_pred CC
Q 017431 265 GN 266 (371)
Q Consensus 265 g~ 266 (371)
+.
T Consensus 184 p~ 185 (277)
T 3don_A 184 PA 185 (277)
T ss_dssp C-
T ss_pred cC
Confidence 75
|
| >3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=95.54 E-value=0.069 Score=48.65 Aligned_cols=91 Identities=16% Similarity=0.218 Sum_probs=61.7
Q ss_pred CEEEEEcCChHHHHHHHHHH-H-cCCCeEEEEcCChhhHH-HHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 188 SIVAVFGLGTVGLAVAEGAK-A-AGASRVIGIDIDPKKFD-RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~-~-~g~~~v~~v~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
-+|.|+|+|.+|...++.++ . .+++.+.+.++++++.+ +++++|...++. ++.+.+.+ .++|+|+.|+
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~------~~~~~l~~---~~~D~V~i~t 79 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT------NYKDMIDT---ENIDAIFIVA 79 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES------CHHHHHTT---SCCSEEEECS
T ss_pred ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC------CHHHHhcC---CCCCEEEEeC
Confidence 47899999999998777776 4 36633445677777765 456678755442 23333221 2799999999
Q ss_pred CCHHHHHHHHHHhccCCceEEEEcc
Q 017431 265 GNVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 265 g~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
+.....+.+.+++.. |+-|.+..
T Consensus 80 p~~~h~~~~~~al~~--G~~v~~eK 102 (346)
T 3cea_A 80 PTPFHPEMTIYAMNA--GLNVFCEK 102 (346)
T ss_dssp CGGGHHHHHHHHHHT--TCEEEECS
T ss_pred ChHhHHHHHHHHHHC--CCEEEEcC
Confidence 987667888888887 45555643
|
| >2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=95.54 E-value=0.091 Score=46.22 Aligned_cols=85 Identities=21% Similarity=0.278 Sum_probs=59.0
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCc-EEecCCCCCchHHHHHHhhcCCCccEEEEccCCH
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 267 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~ 267 (371)
+|.|+|+|.+|.+.+..+...|. +|+++++++++.+.+.+.|.. .... + . .+. .++|+|+-|+...
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~--~----~----~~~--~~~D~vi~av~~~ 68 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQ--D----L----SLL--QTAKIIFLCTPIQ 68 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEES--C----G----GGG--TTCSEEEECSCHH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhCCCCccccC--C----H----HHh--CCCCEEEEECCHH
Confidence 68899999999999888888898 899999999888877777763 1211 1 1 122 3689999999874
Q ss_pred HHHHHHHHH----hccCCceEEEEc
Q 017431 268 SVMRAALEC----CHKGWGTSVIVG 288 (371)
Q Consensus 268 ~~~~~~~~~----l~~~~G~iv~~g 288 (371)
.+...++. +.++ ..++.++
T Consensus 69 -~~~~~~~~l~~~~~~~-~~vv~~~ 91 (279)
T 2f1k_A 69 -LILPTLEKLIPHLSPT-AIVTDVA 91 (279)
T ss_dssp -HHHHHHHHHGGGSCTT-CEEEECC
T ss_pred -HHHHHHHHHHhhCCCC-CEEEECC
Confidence 34444443 3443 4555553
|
| >2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A | Back alignment and structure |
|---|
Probab=95.54 E-value=0.028 Score=52.29 Aligned_cols=91 Identities=14% Similarity=0.046 Sum_probs=62.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
-.|++|.|+|.|.+|...++.++.+|+ +|++.+++.++.+..+++|+... .++.+.+ + ..|+|+.++
T Consensus 189 l~gktvGIIGlG~IG~~vA~~l~a~G~-~V~~~d~~~~~~~~~~~~G~~~~-------~~l~ell-~----~aDvV~l~~ 255 (393)
T 2nac_A 189 LEAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWH-------ATREDMY-P----VCDVVTLNC 255 (393)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEEC-------SSHHHHG-G----GCSEEEECS
T ss_pred CCCCEEEEEeECHHHHHHHHHHHhCCC-EEEEEcCCccchhhHhhcCceec-------CCHHHHH-h----cCCEEEEec
Confidence 468899999999999999999999999 89999888766666666776321 1122222 1 478777766
Q ss_pred CCH----HHH-HHHHHHhccCCceEEEEcc
Q 017431 265 GNV----SVM-RAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 265 g~~----~~~-~~~~~~l~~~~G~iv~~g~ 289 (371)
... +.+ ...+..|+++ ..+|.++.
T Consensus 256 Plt~~t~~li~~~~l~~mk~g-ailIN~aR 284 (393)
T 2nac_A 256 PLHPETEHMINDETLKLFKRG-AYIVNTAR 284 (393)
T ss_dssp CCCTTTTTCBSHHHHTTSCTT-EEEEECSC
T ss_pred CCchHHHHHhhHHHHhhCCCC-CEEEECCC
Confidence 631 122 4556667775 77776654
|
| >1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A* | Back alignment and structure |
|---|
Probab=95.53 E-value=0.038 Score=47.96 Aligned_cols=99 Identities=17% Similarity=0.292 Sum_probs=64.9
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHh----cCCcE-E-ecCCCCCchHHHHHHhhc-
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAA--GASRVIGIDIDPKKFDRAKN----FGVTE-F-VNPKDHDKPIQQVLVDLT- 253 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~--g~~~v~~v~~~~~~~~~~~~----~g~~~-v-i~~~~~~~~~~~~~~~~~- 253 (371)
...++++||-+|+| .|..++.+++.+ +. +|++++.+++..+.+++ .|... + +.. .+..+.+..+.
T Consensus 76 ~~~~~~~VLeiG~G-~G~~~~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~----gda~~~l~~l~~ 149 (247)
T 1sui_A 76 KLINAKNTMEIGVY-TGYSLLATALAIPEDG-KILAMDINKENYELGLPVIKKAGVDHKIDFRE----GPALPVLDEMIK 149 (247)
T ss_dssp HHTTCCEEEEECCG-GGHHHHHHHHHSCTTC-EEEEEESCCHHHHHHHHHHHHTTCGGGEEEEE----SCHHHHHHHHHH
T ss_pred HhhCcCEEEEeCCC-cCHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEE----CCHHHHHHHHHh
Confidence 34567899999886 577788888887 45 99999999987776654 45421 1 111 12222232221
Q ss_pred ----CCCccEEEEccCC---HHHHHHHHHHhccCCceEEEEc
Q 017431 254 ----DGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 254 ----~gg~dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~g 288 (371)
.+.||+||-.... ...++.+.+.|++| |.++.-.
T Consensus 150 ~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~d~ 190 (247)
T 1sui_A 150 DEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVG-GVIGYDN 190 (247)
T ss_dssp SGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTT-CCEEEEC
T ss_pred ccCCCCCEEEEEEcCchHHHHHHHHHHHHhCCCC-eEEEEec
Confidence 3479999853322 45688999999997 9987543
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=95.53 E-value=0.035 Score=49.24 Aligned_cols=79 Identities=14% Similarity=0.098 Sum_probs=48.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHH-H----hcCCcEE---ecCCCC---CchHHHHHHhh
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKFDRA-K----NFGVTEF---VNPKDH---DKPIQQVLVDL 252 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~-~~~~~~-~----~~g~~~v---i~~~~~---~~~~~~~~~~~ 252 (371)
+++++||+|+ |++|.+.++.+...|+ +|+++++++ ++.+.+ + +.+.... .|..+. .......+.+.
T Consensus 22 ~~k~~lVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 100 (288)
T 2x9g_A 22 EAPAAVVTGAAKRIGRAIAVKLHQTGY-RVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSC 100 (288)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHHTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence 4688999988 9999999988888899 898888876 554322 2 2343222 222220 12222222222
Q ss_pred c--CCCccEEEEccC
Q 017431 253 T--DGGVDYSFECIG 265 (371)
Q Consensus 253 ~--~gg~dvvid~~g 265 (371)
. .+++|++++++|
T Consensus 101 ~~~~g~iD~lvnnAG 115 (288)
T 2x9g_A 101 FRAFGRCDVLVNNAS 115 (288)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHhcCCCCEEEECCC
Confidence 1 137999999887
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=95.52 E-value=0.027 Score=49.65 Aligned_cols=95 Identities=18% Similarity=0.136 Sum_probs=60.1
Q ss_pred EEEEEcC-ChHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHhcCCcEE-ecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 189 IVAVFGL-GTVGLAVAEGAKAA--GASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 189 ~VlI~Ga-g~vG~~ai~la~~~--g~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
+|||+|+ |.+|...++.+... |+ +|+++++++++.+.+...+...+ .|..+ . +.+.+... ++|+||+++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~D~~d--~---~~l~~~~~-~~d~vi~~a 74 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPAS-QIIAIVRNVEKASTLADQGVEVRHGDYNQ--P---ESLQKAFA-GVSKLLFIS 74 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTTHHHHHTTCEEEECCTTC--H---HHHHHHTT-TCSEEEECC
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCC-eEEEEEcCHHHHhHHhhcCCeEEEeccCC--H---HHHHHHHh-cCCEEEEcC
Confidence 5899988 99999998888777 88 89998888776655544454332 23322 2 23333332 699999988
Q ss_pred CCH-------HHHHHHHHHhccC-CceEEEEccC
Q 017431 265 GNV-------SVMRAALECCHKG-WGTSVIVGVA 290 (371)
Q Consensus 265 g~~-------~~~~~~~~~l~~~-~G~iv~~g~~ 290 (371)
+.. .....+++.+... -+++|.++..
T Consensus 75 ~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~ 108 (287)
T 2jl1_A 75 GPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYA 108 (287)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEET
T ss_pred CCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence 741 1233444444432 2478888653
|
| >1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A* | Back alignment and structure |
|---|
Probab=95.51 E-value=0.021 Score=46.74 Aligned_cols=100 Identities=18% Similarity=0.240 Sum_probs=66.8
Q ss_pred hhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCC-cE-EecCCCCCchHHHHHHhh
Q 017431 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGV-TE-FVNPKDHDKPIQQVLVDL 252 (371)
Q Consensus 179 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~-~~-vi~~~~~~~~~~~~~~~~ 252 (371)
.....+.++++||-+|+|. |..+..+++.. . +|++++.+++..+.+++ .+. .. .+.. .++.+.+...
T Consensus 26 ~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~-~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~----~d~~~~~~~~ 98 (192)
T 1l3i_A 26 MCLAEPGKNDVAVDVGCGT-GGVTLELAGRV-R-RVYAIDRNPEAISTTEMNLQRHGLGDNVTLME----GDAPEALCKI 98 (192)
T ss_dssp HHHHCCCTTCEEEEESCTT-SHHHHHHHTTS-S-EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEE----SCHHHHHTTS
T ss_pred HHhcCCCCCCEEEEECCCC-CHHHHHHHHhc-C-EEEEEECCHHHHHHHHHHHHHcCCCcceEEEe----cCHHHhcccC
Confidence 3445678899999999876 77788888766 4 99999999988777654 343 11 1111 2222222211
Q ss_pred cCCCccEEEEccCC---HHHHHHHHHHhccCCceEEEEc
Q 017431 253 TDGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 253 ~~gg~dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~g 288 (371)
+.+|+|+..... ...++.+.+.|+++ |.++...
T Consensus 99 --~~~D~v~~~~~~~~~~~~l~~~~~~l~~g-G~l~~~~ 134 (192)
T 1l3i_A 99 --PDIDIAVVGGSGGELQEILRIIKDKLKPG-GRIIVTA 134 (192)
T ss_dssp --CCEEEEEESCCTTCHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred --CCCCEEEECCchHHHHHHHHHHHHhcCCC-cEEEEEe
Confidence 379999965431 45678888889996 9988653
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.51 E-value=0.072 Score=50.82 Aligned_cols=94 Identities=16% Similarity=0.080 Sum_probs=58.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHH-hcCCcE-EecCCCCCchHHHHHHhhcCCCccEEEE
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAK-NFGVTE-FVNPKDHDKPIQQVLVDLTDGGVDYSFE 262 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~-g~~~v~~v~~~~~~~~~~~-~~g~~~-vi~~~~~~~~~~~~~~~~~~gg~dvvid 262 (371)
++.+|+|+|+|.+|.+.+..+... |. +|++++++.++.+.+. +.+... .++..+. .++.+.+. ++|+|++
T Consensus 22 ~~k~VlIiGAGgiG~aia~~L~~~~g~-~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~-~~l~~~l~-----~~DvVIn 94 (467)
T 2axq_A 22 MGKNVLLLGSGFVAQPVIDTLAANDDI-NVTVACRTLANAQALAKPSGSKAISLDVTDD-SALDKVLA-----DNDVVIS 94 (467)
T ss_dssp -CEEEEEECCSTTHHHHHHHHHTSTTE-EEEEEESSHHHHHHHHGGGTCEEEECCTTCH-HHHHHHHH-----TSSEEEE
T ss_pred CCCEEEEECChHHHHHHHHHHHhCCCC-eEEEEECCHHHHHHHHHhcCCcEEEEecCCH-HHHHHHHc-----CCCEEEE
Confidence 356899999999999988888777 67 8999999888765443 334322 2333220 12222221 6999999
Q ss_pred ccCCHHHHHHHHHHhccCCceEEEE
Q 017431 263 CIGNVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 263 ~~g~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
|++..........++..+ -.++..
T Consensus 95 ~tp~~~~~~v~~a~l~~g-~~vvd~ 118 (467)
T 2axq_A 95 LIPYTFHPNVVKSAIRTK-TDVVTS 118 (467)
T ss_dssp CSCGGGHHHHHHHHHHHT-CEEEEC
T ss_pred CCchhhhHHHHHHHHhcC-CEEEEe
Confidence 998743233344556664 555544
|
| >2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A | Back alignment and structure |
|---|
Probab=95.51 E-value=0.053 Score=49.28 Aligned_cols=90 Identities=14% Similarity=0.174 Sum_probs=62.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
-.|.+|.|+|.|.+|...++.++..|. +|++.+++.++.+.+.++|.... ++.+.+. ..|+|+.++
T Consensus 153 l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~--------~l~e~l~-----~aDvVi~~v 218 (330)
T 2gcg_A 153 LTQSTVGIIGLGRIGQAIARRLKPFGV-QRFLYTGRQPRPEEAAEFQAEFV--------STPELAA-----QSDFIVVAC 218 (330)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHGGGTC-CEEEEESSSCCHHHHHTTTCEEC--------CHHHHHH-----HCSEEEECC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcchhHHHhcCceeC--------CHHHHHh-----hCCEEEEeC
Confidence 457899999999999999999999999 89999887766665666665321 1222232 378888887
Q ss_pred CCH----HHH-HHHHHHhccCCceEEEEcc
Q 017431 265 GNV----SVM-RAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 265 g~~----~~~-~~~~~~l~~~~G~iv~~g~ 289 (371)
... ..+ ...+..|+++ ..+|.++.
T Consensus 219 p~~~~t~~~i~~~~~~~mk~g-ailIn~sr 247 (330)
T 2gcg_A 219 SLTPATEGLCNKDFFQKMKET-AVFINISR 247 (330)
T ss_dssp CCCTTTTTCBSHHHHHHSCTT-CEEEECSC
T ss_pred CCChHHHHhhCHHHHhcCCCC-cEEEECCC
Confidence 642 222 3556677775 66665543
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=95.49 E-value=0.094 Score=51.79 Aligned_cols=102 Identities=22% Similarity=0.216 Sum_probs=63.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh---------hhHH----HHHhcCCcEEecCCCCCc--hHHHHH
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP---------KKFD----RAKNFGVTEFVNPKDHDK--PIQQVL 249 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~---------~~~~----~~~~~g~~~vi~~~~~~~--~~~~~~ 249 (371)
.|+++||+|+ +++|.+.++.+...|+ +|++.+++. ++.+ .+++.|...+.+..+... .+.+.+
T Consensus 7 ~gkvalVTGas~GIG~a~A~~la~~Ga-~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~ 85 (604)
T 2et6_A 7 KDKVVIITGAGGGLGKYYSLEFAKLGA-KVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETA 85 (604)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHH
Confidence 4688999988 8999999999889999 888887643 3322 223345444555554321 222222
Q ss_pred HhhcCCCccEEEEccCCH-------------------------HHHHHHHHHhcc-CCceEEEEcc
Q 017431 250 VDLTDGGVDYSFECIGNV-------------------------SVMRAALECCHK-GWGTSVIVGV 289 (371)
Q Consensus 250 ~~~~~gg~dvvid~~g~~-------------------------~~~~~~~~~l~~-~~G~iv~~g~ 289 (371)
.+.. |.+|+++++.|-. ...+.++..|.. ++|+||.+++
T Consensus 86 ~~~~-G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS 150 (604)
T 2et6_A 86 VKNF-GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSS 150 (604)
T ss_dssp HHHH-SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred HHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 2222 4799999988840 134556666642 2389999876
|
| >1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A* | Back alignment and structure |
|---|
Probab=95.48 E-value=0.021 Score=48.55 Aligned_cols=96 Identities=22% Similarity=0.221 Sum_probs=65.5
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----cC-----Cc--EEecCCCCCchHHHHHH
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FG-----VT--EFVNPKDHDKPIQQVLV 250 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~v~~v~~~~~~~~~~~~----~g-----~~--~vi~~~~~~~~~~~~~~ 250 (371)
.++++++||-+|+|. |..+..+++..|. .+|++++.+++..+.+++ .+ .. .++. .+ .. ..
T Consensus 74 ~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~-~d--~~--~~-- 145 (226)
T 1i1n_A 74 QLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVV-GD--GR--MG-- 145 (226)
T ss_dssp TSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEE-SC--GG--GC--
T ss_pred hCCCCCEEEEEcCCc-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEE-CC--cc--cC--
Confidence 377899999999874 7888888888763 289999999988776653 22 11 1221 11 10 00
Q ss_pred hhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEE
Q 017431 251 DLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 251 ~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
....+.||+|+........+..+.+.|+++ |+++..
T Consensus 146 ~~~~~~fD~i~~~~~~~~~~~~~~~~Lkpg-G~lv~~ 181 (226)
T 1i1n_A 146 YAEEAPYDAIHVGAAAPVVPQALIDQLKPG-GRLILP 181 (226)
T ss_dssp CGGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred cccCCCcCEEEECCchHHHHHHHHHhcCCC-cEEEEE
Confidence 011237999997666556678899999997 998865
|
| >2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.48 E-value=0.093 Score=47.15 Aligned_cols=88 Identities=17% Similarity=0.261 Sum_probs=61.0
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCH
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 267 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~ 267 (371)
.+|.|+|+|.+|.+.+..+...|. +|++.++++++.+.+.+.|.. + . .+..+.+. .+|+|+.|+..+
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~-~--~----~~~~~~~~-----~~DvVi~av~~~ 97 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGH-TVTVWNRTAEKCDLFIQEGAR-L--G----RTPAEVVS-----TCDITFACVSDP 97 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSGGGGHHHHHTTCE-E--C----SCHHHHHH-----HCSEEEECCSSH
T ss_pred CeEEEEcccHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHcCCE-E--c----CCHHHHHh-----cCCEEEEeCCCH
Confidence 469999999999998888888898 799999999888877777653 1 1 12223232 379999999865
Q ss_pred HHHHHHHH-------HhccCCceEEEEcc
Q 017431 268 SVMRAALE-------CCHKGWGTSVIVGV 289 (371)
Q Consensus 268 ~~~~~~~~-------~l~~~~G~iv~~g~ 289 (371)
..++..+. .+.++ ..++.++.
T Consensus 98 ~~~~~v~~~~~~~~~~l~~~-~~vv~~s~ 125 (316)
T 2uyy_A 98 KAAKDLVLGPSGVLQGIRPG-KCYVDMST 125 (316)
T ss_dssp HHHHHHHHSTTCGGGGCCTT-CEEEECSC
T ss_pred HHHHHHHcCchhHhhcCCCC-CEEEECCC
Confidence 55655553 34453 55555543
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=95.48 E-value=0.036 Score=47.78 Aligned_cols=94 Identities=26% Similarity=0.351 Sum_probs=55.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCC
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 266 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~ 266 (371)
++|||+|+ |.+|.+.+..+...|+ +|+++++++++.+. .+- .|..+ ...+.+.+.+. .+++|++++++|.
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~--~~~----~D~~~-~~~~~~~~~~~-~~~~d~vi~~Ag~ 72 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGH-TVIGIDRGQADIEA--DLS----TPGGR-ETAVAAVLDRC-GGVLDGLVCCAGV 72 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEEC--CTT----SHHHH-HHHHHHHHHHH-TTCCSEEEECCCC
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCChhHccc--ccc----CCccc-HHHHHHHHHHc-CCCccEEEECCCC
Confidence 47999988 9999999988888899 89999887654211 000 00000 01122222222 2479999998874
Q ss_pred H------------------HHHHHHHHHhcc-CCceEEEEccC
Q 017431 267 V------------------SVMRAALECCHK-GWGTSVIVGVA 290 (371)
Q Consensus 267 ~------------------~~~~~~~~~l~~-~~G~iv~~g~~ 290 (371)
. .+++.+.+.+.. +.+++|.+++.
T Consensus 73 ~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~ 115 (255)
T 2dkn_A 73 GVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSI 115 (255)
T ss_dssp CTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG
T ss_pred CCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecc
Confidence 2 123444444433 12789988764
|
| >2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B | Back alignment and structure |
|---|
Probab=95.47 E-value=0.056 Score=49.50 Aligned_cols=92 Identities=17% Similarity=0.310 Sum_probs=62.4
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHH-HcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEE
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAK-AAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE 262 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~-~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid 262 (371)
--.|++|.|+|.|.+|...++.++ ..|+ +|++.+++.++.+.+.++|... . .++.+.+. ..|+|+.
T Consensus 160 ~l~g~~vgIIG~G~IG~~vA~~l~~~~G~-~V~~~d~~~~~~~~~~~~g~~~-~------~~l~ell~-----~aDvVil 226 (348)
T 2w2k_A 160 NPRGHVLGAVGLGAIQKEIARKAVHGLGM-KLVYYDVAPADAETEKALGAER-V------DSLEELAR-----RSDCVSV 226 (348)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCC-EEEEECSSCCCHHHHHHHTCEE-C------SSHHHHHH-----HCSEEEE
T ss_pred CCCCCEEEEEEECHHHHHHHHHHHHhcCC-EEEEECCCCcchhhHhhcCcEE-e------CCHHHHhc-----cCCEEEE
Confidence 356889999999999999999999 9999 8999998877666666666532 1 12222232 3788887
Q ss_pred ccCCHH----HH-HHHHHHhccCCceEEEEcc
Q 017431 263 CIGNVS----VM-RAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 263 ~~g~~~----~~-~~~~~~l~~~~G~iv~~g~ 289 (371)
++.... .+ ...+..|+++ ..++.++.
T Consensus 227 ~vp~~~~t~~li~~~~l~~mk~g-ailin~sr 257 (348)
T 2w2k_A 227 SVPYMKLTHHLIDEAFFAAMKPG-SRIVNTAR 257 (348)
T ss_dssp CCCCSGGGTTCBCHHHHHHSCTT-EEEEECSC
T ss_pred eCCCChHHHHHhhHHHHhcCCCC-CEEEECCC
Confidence 766421 12 3455667774 66665543
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=95.46 E-value=0.032 Score=48.90 Aligned_cols=70 Identities=16% Similarity=0.092 Sum_probs=46.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE-ecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
+++|||+|+ |.+|.+.++.+...|+ +|+++++++.+.+ ..+...+ .|..+ .+ .+.+... ++|++|++.
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~---~~~~~~~~~Dl~d--~~---~~~~~~~-~~D~vi~~A 72 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAE-ILRLADLSPLDPA---GPNEECVQCDLAD--AN---AVNAMVA-GCDGIVHLG 72 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEE-EEEEEESSCCCCC---CTTEEEEECCTTC--HH---HHHHHHT-TCSEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCC-EEEEEecCCcccc---CCCCEEEEcCCCC--HH---HHHHHHc-CCCEEEECC
Confidence 468999988 9999999888888898 8999988876533 1111111 22222 22 2333322 699999988
Q ss_pred CC
Q 017431 265 GN 266 (371)
Q Consensus 265 g~ 266 (371)
|.
T Consensus 73 g~ 74 (267)
T 3rft_A 73 GI 74 (267)
T ss_dssp SC
T ss_pred CC
Confidence 74
|
| >2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=95.45 E-value=0.13 Score=45.29 Aligned_cols=90 Identities=19% Similarity=0.301 Sum_probs=60.9
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHHhcCCcE-EecCCCCCchHHHHHHhhcCC-CccEEEEcc
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTDG-GVDYSFECI 264 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~-~v~~v~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~ 264 (371)
.+|.|+|+|.+|.+.++.++..|.. +|++.++++++.+.++++|... .. .+ ..+.+ . .+|+|+.|+
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~--~~----~~~~~-----~~~aDvVilav 70 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGT--TS----IAKVE-----DFSPDFVMLSS 70 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEE--SC----GGGGG-----GTCCSEEEECS
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCccccc--CC----HHHHh-----cCCCCEEEEcC
Confidence 3689999999999999988888853 6889999999888888888632 11 11 11111 2 589999999
Q ss_pred CCHHH---HHHHHHHhccCCceEEEEcc
Q 017431 265 GNVSV---MRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 265 g~~~~---~~~~~~~l~~~~G~iv~~g~ 289 (371)
..... +......+.++ ..++.++.
T Consensus 71 p~~~~~~v~~~l~~~l~~~-~iv~~~~~ 97 (281)
T 2g5c_A 71 PVRTFREIAKKLSYILSED-ATVTDQGS 97 (281)
T ss_dssp CHHHHHHHHHHHHHHSCTT-CEEEECCS
T ss_pred CHHHHHHHHHHHHhhCCCC-cEEEECCC
Confidence 87432 23333445664 66665544
|
| >1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A | Back alignment and structure |
|---|
Probab=95.45 E-value=0.056 Score=49.20 Aligned_cols=97 Identities=19% Similarity=0.122 Sum_probs=64.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcC------C---cEEecCCCCCchHHHHHHhhcCC
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG------V---TEFVNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g------~---~~vi~~~~~~~~~~~~~~~~~~g 255 (371)
.++.+||.+|+| .|..+..+++..+..+|++++.+++-.+.+++.- . ..-+.. .+..+.+.....+
T Consensus 119 ~~~~~VLdIG~G-~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~----~D~~~~l~~~~~~ 193 (334)
T 1xj5_A 119 PNPKKVLVIGGG-DGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI----GDGVAFLKNAAEG 193 (334)
T ss_dssp SCCCEEEEETCS-SSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE----SCHHHHHHTSCTT
T ss_pred CCCCEEEEECCC-ccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEE----CCHHHHHHhccCC
Confidence 456899999875 4566677777665559999999998888776531 1 111111 2333333333334
Q ss_pred CccEEEEccC----------CHHHHHHHHHHhccCCceEEEE
Q 017431 256 GVDYSFECIG----------NVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 256 g~dvvid~~g----------~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
.||+|+.... ....++.+.+.|+++ |.++..
T Consensus 194 ~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~ 234 (334)
T 1xj5_A 194 SYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPG-GVVCTQ 234 (334)
T ss_dssp CEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEE-EEEEEE
T ss_pred CccEEEECCCCccCcchhhhHHHHHHHHHHhcCCC-cEEEEe
Confidence 7999985322 246788999999997 999875
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.43 E-value=0.039 Score=48.22 Aligned_cols=80 Identities=23% Similarity=0.319 Sum_probs=50.5
Q ss_pred CCCCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE--ecCCCCCchHHHHHHhhc-
Q 017431 184 VEPGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF--VNPKDHDKPIQQVLVDLT- 253 (371)
Q Consensus 184 ~~~g~~VlI~Ga---g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v--i~~~~~~~~~~~~~~~~~- 253 (371)
..++++|||+|+ +++|.+.++.+...|+ +|++++++++..+.+ ++.+.... .|..+ .......+.+..
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~ 88 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSELVFPCDVAD-DAQIDALFASLKT 88 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTC-HHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcCCcEEEECCCCC-HHHHHHHHHHHHH
Confidence 456889999974 6899999888888999 899998876544333 33443222 23332 122222222221
Q ss_pred -CCCccEEEEccC
Q 017431 254 -DGGVDYSFECIG 265 (371)
Q Consensus 254 -~gg~dvvid~~g 265 (371)
.+++|++++++|
T Consensus 89 ~~g~id~lv~nAg 101 (271)
T 3ek2_A 89 HWDSLDGLVHSIG 101 (271)
T ss_dssp HCSCEEEEEECCC
T ss_pred HcCCCCEEEECCc
Confidence 237999999887
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=95.39 E-value=0.022 Score=49.58 Aligned_cols=74 Identities=20% Similarity=0.197 Sum_probs=47.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE-EecCCCCCchHHHHHHhhc--CCCccEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLT--DGGVDYSF 261 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~~~~~~~--~gg~dvvi 261 (371)
.++++||+|+ |++|.+.++.+...|+ +|+++++++++.+. ... ..|..+ .....+.+.+.. .+.+|+++
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~-----~~~~~~Dl~d-~~~v~~~~~~~~~~~g~iD~lv 92 (253)
T 2nm0_A 20 MSRSVLVTGGNRGIGLAIARAFADAGD-KVAITYRSGEPPEG-----FLAVKCDITD-TEQVEQAYKEIEETHGPVEVLI 92 (253)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTT-----SEEEECCTTS-HHHHHHHHHHHHHHTCSCSEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHhhcc-----ceEEEecCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 3689999988 9999999998888999 89888887654321 111 123333 122222222221 23789999
Q ss_pred EccCC
Q 017431 262 ECIGN 266 (371)
Q Consensus 262 d~~g~ 266 (371)
+++|.
T Consensus 93 ~nAg~ 97 (253)
T 2nm0_A 93 ANAGV 97 (253)
T ss_dssp EECSC
T ss_pred ECCCC
Confidence 98774
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.39 E-value=0.015 Score=52.62 Aligned_cols=79 Identities=14% Similarity=0.034 Sum_probs=47.0
Q ss_pred CCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh--HHHHHhc----CCcEE-ecCCCCCchHHHHHHhhc
Q 017431 182 AKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK--FDRAKNF----GVTEF-VNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 182 ~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~--~~~~~~~----g~~~v-i~~~~~~~~~~~~~~~~~ 253 (371)
-..+++.+|||+|+ |.+|...++.+...|+ +|++++++.++ .+.+..+ +...+ .|..+ . +.+.+..
T Consensus 9 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~---~~~~~~~ 82 (335)
T 1rpn_A 9 HHGSMTRSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMAD--A---CSVQRAV 82 (335)
T ss_dssp ------CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTC--H---HHHHHHH
T ss_pred cccccCCeEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCCccccccchhhccccCceEEEECCCCC--H---HHHHHHH
Confidence 34567899999988 9999999998888998 89998887653 1223333 11111 22222 2 2233332
Q ss_pred CC-CccEEEEccCC
Q 017431 254 DG-GVDYSFECIGN 266 (371)
Q Consensus 254 ~g-g~dvvid~~g~ 266 (371)
.+ ++|+||++++.
T Consensus 83 ~~~~~d~Vih~A~~ 96 (335)
T 1rpn_A 83 IKAQPQEVYNLAAQ 96 (335)
T ss_dssp HHHCCSEEEECCSC
T ss_pred HHcCCCEEEECccc
Confidence 23 68999998874
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=95.39 E-value=0.14 Score=45.94 Aligned_cols=89 Identities=19% Similarity=0.116 Sum_probs=62.7
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCC
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 266 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~ 266 (371)
..+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|... . .+..+.+. ..|+||-|+..
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~---~----~~~~e~~~-----~aDvVi~~vp~ 75 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGK-RVAIWNRSPGKAAALVAAGAHL---C----ESVKAALS-----ASPATIFVLLD 75 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTCEE---C----SSHHHHHH-----HSSEEEECCSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCee---c----CCHHHHHh-----cCCEEEEEeCC
Confidence 4579999999999998888888999 8999999999888877777631 1 22333333 37999999987
Q ss_pred HHHHHHHHH-----HhccCCceEEEEcc
Q 017431 267 VSVMRAALE-----CCHKGWGTSVIVGV 289 (371)
Q Consensus 267 ~~~~~~~~~-----~l~~~~G~iv~~g~ 289 (371)
+..++..+. .+.++ ..++.++.
T Consensus 76 ~~~~~~v~~~~~l~~~~~g-~ivid~st 102 (306)
T 3l6d_A 76 NHATHEVLGMPGVARALAH-RTIVDYTT 102 (306)
T ss_dssp HHHHHHHHTSTTHHHHTTT-CEEEECCC
T ss_pred HHHHHHHhcccchhhccCC-CEEEECCC
Confidence 654554432 34453 55665544
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=95.38 E-value=0.047 Score=49.33 Aligned_cols=78 Identities=23% Similarity=0.253 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC---------ChhhHH----HHHhcCCcEEecCCCCCchHHHHHHh
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI---------DPKKFD----RAKNFGVTEFVNPKDHDKPIQQVLVD 251 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~---------~~~~~~----~~~~~g~~~vi~~~~~~~~~~~~~~~ 251 (371)
.|+++||+|+ |++|.+.++.+...|+ +|+++++ +.++.+ .+++.+...+.|..+. ......+.+
T Consensus 8 ~gk~~lVTGas~GIG~~~a~~La~~Ga-~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~-~~~~~~~~~ 85 (319)
T 1gz6_A 8 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSV-EAGEKLVKT 85 (319)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCG-GGHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCH-HHHHHHHHH
Confidence 4789999988 9999999998888999 8888643 344332 2233444444555442 222222222
Q ss_pred hc--CCCccEEEEccC
Q 017431 252 LT--DGGVDYSFECIG 265 (371)
Q Consensus 252 ~~--~gg~dvvid~~g 265 (371)
.. .+++|+++++.|
T Consensus 86 ~~~~~g~iD~lVnnAG 101 (319)
T 1gz6_A 86 ALDTFGRIDVVVNNAG 101 (319)
T ss_dssp HHHHTSCCCEEEECCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 21 237999999887
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=95.38 E-value=0.14 Score=45.06 Aligned_cols=90 Identities=14% Similarity=0.174 Sum_probs=62.0
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE-ecCCCCCchHHHHHHhhcCCCccEEEEccCC
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 266 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~gg~dvvid~~g~ 266 (371)
.+|||+|+|.+|...+..+...|+ +|+++++++++.+.+...+...+ .|..+ + . -.++|+||++++.
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~D~~d----~----~---~~~~d~vi~~a~~ 73 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGW-RIIGTSRNPDQMEAIRASGAEPLLWPGEE----P----S---LDGVTHLLISTAP 73 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTC-EEEEEESCGGGHHHHHHTTEEEEESSSSC----C----C---CTTCCEEEECCCC
T ss_pred CcEEEECCcHHHHHHHHHHHHCCC-EEEEEEcChhhhhhHhhCCCeEEEecccc----c----c---cCCCCEEEECCCc
Confidence 589999999999999999988899 89999999988777766665433 22222 1 1 2379999999874
Q ss_pred H----HHHHHHHHHhcc---CCceEEEEcc
Q 017431 267 V----SVMRAALECCHK---GWGTSVIVGV 289 (371)
Q Consensus 267 ~----~~~~~~~~~l~~---~~G~iv~~g~ 289 (371)
. .....+++.+.. +-.++|.++.
T Consensus 74 ~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss 103 (286)
T 3ius_A 74 DSGGDPVLAALGDQIAARAAQFRWVGYLST 103 (286)
T ss_dssp BTTBCHHHHHHHHHHHHTGGGCSEEEEEEE
T ss_pred cccccHHHHHHHHHHHhhcCCceEEEEeec
Confidence 2 223444444432 1267887764
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=95.37 E-value=0.045 Score=48.64 Aligned_cols=75 Identities=20% Similarity=0.218 Sum_probs=50.2
Q ss_pred CCCCEEEEEc-CChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc----CCcE-EecCCCCCchHHHHHHhhcCCCc
Q 017431 185 EPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF----GVTE-FVNPKDHDKPIQQVLVDLTDGGV 257 (371)
Q Consensus 185 ~~g~~VlI~G-ag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~----g~~~-vi~~~~~~~~~~~~~~~~~~gg~ 257 (371)
-+++++||+| +|++|.+.+..+...|+ +|++++++.++.+.+ +++ +... ..+..+ . +.+.+... .+
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~-~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~--~---~~~~~~~~-~~ 189 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETAD--D---ASRAEAVK-GA 189 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCS--H---HHHHHHTT-TC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCC--H---HHHHHHHH-hC
Confidence 4678999998 59999999999999999 699998987765533 332 2221 233322 1 12323222 48
Q ss_pred cEEEEccCC
Q 017431 258 DYSFECIGN 266 (371)
Q Consensus 258 dvvid~~g~ 266 (371)
|++++++|.
T Consensus 190 DvlVn~ag~ 198 (287)
T 1lu9_A 190 HFVFTAGAI 198 (287)
T ss_dssp SEEEECCCT
T ss_pred CEEEECCCc
Confidence 999999963
|
| >1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7 | Back alignment and structure |
|---|
Probab=95.37 E-value=0.018 Score=49.10 Aligned_cols=98 Identities=16% Similarity=0.205 Sum_probs=66.9
Q ss_pred hhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC----cEEecCCCCCchHHHHHHhhc-
Q 017431 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV----TEFVNPKDHDKPIQQVLVDLT- 253 (371)
Q Consensus 179 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~----~~vi~~~~~~~~~~~~~~~~~- 253 (371)
.....+.++++||-+|+|. |..+..+++.. . +|++++.+++..+.+++... ..++.. + ..+ ...
T Consensus 63 ~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~-~-~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~-d----~~~---~~~~ 131 (231)
T 1vbf_A 63 LDELDLHKGQKVLEIGTGI-GYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIKLILG-D----GTL---GYEE 131 (231)
T ss_dssp HHHTTCCTTCEEEEECCTT-SHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEEEEES-C----GGG---CCGG
T ss_pred HHhcCCCCCCEEEEEcCCC-CHHHHHHHHHc-C-EEEEEeCCHHHHHHHHHHHhhcCCeEEEEC-C----ccc---cccc
Confidence 4555678899999999975 77888888774 4 99999999998887765321 122221 1 110 011
Q ss_pred CCCccEEEEccCCHHHHHHHHHHhccCCceEEEEc
Q 017431 254 DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 254 ~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g 288 (371)
.+.||+|+....-.+....+.+.|+++ |+++..-
T Consensus 132 ~~~fD~v~~~~~~~~~~~~~~~~L~pg-G~l~~~~ 165 (231)
T 1vbf_A 132 EKPYDRVVVWATAPTLLCKPYEQLKEG-GIMILPI 165 (231)
T ss_dssp GCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEEE
T ss_pred CCCccEEEECCcHHHHHHHHHHHcCCC-cEEEEEE
Confidence 237999997655445557888999997 9988763
|
| >3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=95.37 E-value=0.076 Score=45.50 Aligned_cols=95 Identities=17% Similarity=0.122 Sum_probs=64.6
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEE
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE 262 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid 262 (371)
.++++.+||=+|+| .|..+..+++. |+ +|++++.+++..+.+++. ..++. .+..+.+....++.||+|+.
T Consensus 38 ~~~~~~~vLDiGcG-~G~~~~~l~~~-~~-~v~gvD~s~~~~~~a~~~--~~~~~-----~d~~~~~~~~~~~~fD~i~~ 107 (240)
T 3dli_A 38 YFKGCRRVLDIGCG-RGEFLELCKEE-GI-ESIGVDINEDMIKFCEGK--FNVVK-----SDAIEYLKSLPDKYLDGVMI 107 (240)
T ss_dssp GTTTCSCEEEETCT-TTHHHHHHHHH-TC-CEEEECSCHHHHHHHHTT--SEEEC-----SCHHHHHHTSCTTCBSEEEE
T ss_pred hhcCCCeEEEEeCC-CCHHHHHHHhC-CC-cEEEEECCHHHHHHHHhh--cceee-----ccHHHHhhhcCCCCeeEEEE
Confidence 35678999999885 34455566665 88 899999999988888876 23332 22333232333458999996
Q ss_pred cc-----CC---HHHHHHHHHHhccCCceEEEEc
Q 017431 263 CI-----GN---VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 263 ~~-----g~---~~~~~~~~~~l~~~~G~iv~~g 288 (371)
.. .. ...++.+.+.|+++ |.++...
T Consensus 108 ~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 140 (240)
T 3dli_A 108 SHFVEHLDPERLFELLSLCYSKMKYS-SYIVIES 140 (240)
T ss_dssp ESCGGGSCGGGHHHHHHHHHHHBCTT-CCEEEEE
T ss_pred CCchhhCCcHHHHHHHHHHHHHcCCC-cEEEEEe
Confidence 32 22 35688999999997 9988653
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=95.34 E-value=0.081 Score=48.22 Aligned_cols=76 Identities=18% Similarity=0.212 Sum_probs=51.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHH-hcCC--cEE--ecCCCCCchHHHHHHhhcCCCc
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAK-NFGV--TEF--VNPKDHDKPIQQVLVDLTDGGV 257 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~-g~~~v~~v~~~~~~~~~~~-~~g~--~~v--i~~~~~~~~~~~~~~~~~~gg~ 257 (371)
-++++|||+|+ |.+|...++.+... |+.+|+++++++.+.+.+. ++.. ... .|..+ . +.+.+... ++
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d--~---~~l~~~~~-~~ 92 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRD--L---ERLNYALE-GV 92 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTC--H---HHHHHHTT-TC
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCC--H---HHHHHHHh-cC
Confidence 34689999987 99999998888877 8768999999887765443 3321 112 23222 2 23333332 69
Q ss_pred cEEEEccCC
Q 017431 258 DYSFECIGN 266 (371)
Q Consensus 258 dvvid~~g~ 266 (371)
|+||++++.
T Consensus 93 D~Vih~Aa~ 101 (344)
T 2gn4_A 93 DICIHAAAL 101 (344)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999874
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=95.34 E-value=0.067 Score=50.64 Aligned_cols=106 Identities=19% Similarity=0.236 Sum_probs=70.5
Q ss_pred cCCCCCCCEEEEEcCChHHHHHHHHHHH-cCCC--eEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCc
Q 017431 181 TAKVEPGSIVAVFGLGTVGLAVAEGAKA-AGAS--RVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGV 257 (371)
Q Consensus 181 ~~~~~~g~~VlI~Gag~vG~~ai~la~~-~g~~--~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~ 257 (371)
.-.+....+|||+|+|+||..++.++.. .+.. .|+.++..+.+.++.+.+|.......-+ ..+..+.+..+..++
T Consensus 7 ~~~~~~~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~~~~~~Vd-adnv~~~l~aLl~~~- 84 (480)
T 2ph5_A 7 TKKILFKNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSFKLQQIT-PQNYLEVIGSTLEEN- 84 (480)
T ss_dssp TTCBCCCSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCEEEECCCC-TTTHHHHTGGGCCTT-
T ss_pred cceecCCCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCceeEEecc-chhHHHHHHHHhcCC-
Confidence 3445566789999999999998877755 4553 6888887776666666677533321111 144445555555444
Q ss_pred cEEEEccCCHHHHHHHHHHhccCCceEEEEcc
Q 017431 258 DYSFECIGNVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 258 dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
|+|++++-....+..+-.|+..| -.++....
T Consensus 85 DvVIN~s~~~~~l~Im~acleaG-v~YlDTa~ 115 (480)
T 2ph5_A 85 DFLIDVSIGISSLALIILCNQKG-ALYINAAT 115 (480)
T ss_dssp CEEEECCSSSCHHHHHHHHHHHT-CEEEESSC
T ss_pred CEEEECCccccCHHHHHHHHHcC-CCEEECCC
Confidence 99999876655577777777785 77777654
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=95.34 E-value=0.067 Score=46.71 Aligned_cols=78 Identities=18% Similarity=0.293 Sum_probs=48.9
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChh---hHHHH-HhcCCcEEe--cCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPK---KFDRA-KNFGVTEFV--NPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga---g~vG~~ai~la~~~g~~~v~~v~~~~~---~~~~~-~~~g~~~vi--~~~~~~~~~~~~~~~~~~-- 254 (371)
+++++||+|+ |++|.+.++.+...|+ +|++++++++ ..+.+ .+.+....+ |..+ .....+.+.+...
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~ 85 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAE-DASIDTMFAELGKVW 85 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTC-HHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCC-HHHHHHHHHHHHHHc
Confidence 4689999976 5899999998888999 8988888762 22222 223332222 3333 1223333333322
Q ss_pred CCccEEEEccC
Q 017431 255 GGVDYSFECIG 265 (371)
Q Consensus 255 gg~dvvid~~g 265 (371)
+++|++++++|
T Consensus 86 g~iD~lv~~Ag 96 (265)
T 1qsg_A 86 PKFDGFVHSIG 96 (265)
T ss_dssp SSEEEEEECCC
T ss_pred CCCCEEEECCC
Confidence 37999999887
|
| >3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A* | Back alignment and structure |
|---|
Probab=95.32 E-value=0.063 Score=48.15 Aligned_cols=98 Identities=15% Similarity=0.091 Sum_probs=63.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcC---------CcEEecCCCCCchHHHHHHhhcCC
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG---------VTEFVNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g---------~~~vi~~~~~~~~~~~~~~~~~~g 255 (371)
.++++||++|+| .|..+..+++..+..+|++++.+++-.+.+++.- ...-+.. .+..+.+.....+
T Consensus 94 ~~~~~VLdiG~G-~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~----~D~~~~~~~~~~~ 168 (304)
T 3bwc_A 94 PKPERVLIIGGG-DGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRV----GDGLAFVRQTPDN 168 (304)
T ss_dssp SSCCEEEEEECT-TSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE----SCHHHHHHSSCTT
T ss_pred CCCCeEEEEcCC-CCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEE----CcHHHHHHhccCC
Confidence 567899999886 3666667777655559999999998887776532 1111111 2233333322334
Q ss_pred CccEEEEccCC----------HHHHHHHHHHhccCCceEEEEc
Q 017431 256 GVDYSFECIGN----------VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 256 g~dvvid~~g~----------~~~~~~~~~~l~~~~G~iv~~g 288 (371)
.||+|+..... ...++.+.+.|+++ |.++...
T Consensus 169 ~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~ 210 (304)
T 3bwc_A 169 TYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPD-GICCNQG 210 (304)
T ss_dssp CEEEEEEECC---------CCHHHHHHHHHHEEEE-EEEEEEE
T ss_pred ceeEEEECCCCccccchhhhHHHHHHHHHHhcCCC-cEEEEec
Confidence 89998853321 35688999999997 9998764
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=95.31 E-value=0.04 Score=47.94 Aligned_cols=78 Identities=10% Similarity=0.169 Sum_probs=48.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHH---cCCCeEEEEcCChhhHHHH-Hhc-----CCcE-E--ecCCCCCchHHHHHHhh
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKA---AGASRVIGIDIDPKKFDRA-KNF-----GVTE-F--VNPKDHDKPIQQVLVDL 252 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~---~g~~~v~~v~~~~~~~~~~-~~~-----g~~~-v--i~~~~~~~~~~~~~~~~ 252 (371)
+++++||+|+ |++|.+.+..+.. .|+ +|+++++++++.+.+ +++ +... . .|..+ .....+.+.+.
T Consensus 5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~ 82 (259)
T 1oaa_A 5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGT-EAGVQRLLSAV 82 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTS-HHHHHHHHHHH
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCC-HHHHHHHHHHH
Confidence 4678999988 9999998877776 799 899999988765433 222 3322 1 23333 12233333333
Q ss_pred ----cCCCcc--EEEEccC
Q 017431 253 ----TDGGVD--YSFECIG 265 (371)
Q Consensus 253 ----~~gg~d--vvid~~g 265 (371)
..+.+| +++++.|
T Consensus 83 ~~~~~~g~~d~~~lvnnAg 101 (259)
T 1oaa_A 83 RELPRPEGLQRLLLINNAA 101 (259)
T ss_dssp HHSCCCTTCCEEEEEECCC
T ss_pred HhccccccCCccEEEECCc
Confidence 223678 9999876
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=95.30 E-value=0.049 Score=52.65 Aligned_cols=79 Identities=16% Similarity=0.242 Sum_probs=51.8
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh----H---HHHHhcCCcEEe---cCCCCCchHHHHHHhh
Q 017431 184 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK----F---DRAKNFGVTEFV---NPKDHDKPIQQVLVDL 252 (371)
Q Consensus 184 ~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~----~---~~~~~~g~~~vi---~~~~~~~~~~~~~~~~ 252 (371)
++++.+|||+|+ |++|...+..+...|+++|+.+.++... . +.+++.|....+ |..+ .....+.+.+
T Consensus 256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd-~~~v~~~~~~- 333 (511)
T 2z5l_A 256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAE-RDALAALVTA- 333 (511)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSC-HHHHHHHHHH-
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCC-HHHHHHHHhc-
Confidence 578899999987 9999998888888899778888777531 2 223445643322 2222 1222222322
Q ss_pred cCCCccEEEEccCC
Q 017431 253 TDGGVDYSFECIGN 266 (371)
Q Consensus 253 ~~gg~dvvid~~g~ 266 (371)
+.+|++|++.|.
T Consensus 334 --~~ld~VVh~AGv 345 (511)
T 2z5l_A 334 --YPPNAVFHTAGI 345 (511)
T ss_dssp --SCCSEEEECCCC
T ss_pred --CCCcEEEECCcc
Confidence 479999999874
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=95.30 E-value=0.11 Score=45.89 Aligned_cols=41 Identities=32% Similarity=0.438 Sum_probs=36.0
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 229 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~ 229 (371)
++|.|+|+|.+|...++.+...|+ +|++.++++++.+.+.+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~ 45 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKK 45 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHH
Confidence 589999999999999999999999 89999999988766544
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.29 E-value=0.033 Score=48.47 Aligned_cols=79 Identities=20% Similarity=0.249 Sum_probs=49.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhH-HHHH----hcCCcEE---ecCCCCCchHHHHHHhhc--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKF-DRAK----NFGVTEF---VNPKDHDKPIQQVLVDLT--D 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~-~~~~----~~g~~~v---i~~~~~~~~~~~~~~~~~--~ 254 (371)
++++|||+|+ |.+|.+.+..+...|+ +|++++++.++. +.++ +.+.... .|..+ .......+.+.. -
T Consensus 13 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 90 (265)
T 1h5q_A 13 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN-TDIVTKTIQQIDADL 90 (265)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTC-HHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCC-HHHHHHHHHHHHHhc
Confidence 4678999988 9999999988888999 898888854432 2222 2243221 23332 122323333322 2
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+.+|++++++|.
T Consensus 91 ~~id~li~~Ag~ 102 (265)
T 1h5q_A 91 GPISGLIANAGV 102 (265)
T ss_dssp CSEEEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 369999998874
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=95.29 E-value=0.033 Score=49.06 Aligned_cols=95 Identities=18% Similarity=0.242 Sum_probs=58.5
Q ss_pred EEEEEcC-ChHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHhcCCcEE-ecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 189 IVAVFGL-GTVGLAVAEGAKAA--GASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 189 ~VlI~Ga-g~vG~~ai~la~~~--g~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
+|||+|+ |.+|...++.+... |+ +|+++++++++.+.+...+...+ .|..+ . +.+.+... ++|+||+++
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~D~~d--~---~~~~~~~~-~~d~vi~~a 73 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPAS-QIVAIVRNPAKAQALAAQGITVRQADYGD--E---AALTSALQ-GVEKLLLIS 73 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTCHHHHHTTCEEEECCTTC--H---HHHHHHTT-TCSEEEECC
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCc-eEEEEEcChHhhhhhhcCCCeEEEcCCCC--H---HHHHHHHh-CCCEEEEeC
Confidence 4899988 99999999888877 88 88998888776555544454332 23322 2 23333332 689999988
Q ss_pred CCH-----HHHHHHHHHhcc-CCceEEEEccC
Q 017431 265 GNV-----SVMRAALECCHK-GWGTSVIVGVA 290 (371)
Q Consensus 265 g~~-----~~~~~~~~~l~~-~~G~iv~~g~~ 290 (371)
+.. .....+++.+.. +-+++|.+++.
T Consensus 74 ~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~ 105 (286)
T 2zcu_A 74 SSEVGQRAPQHRNVINAAKAAGVKFIAYTSLL 105 (286)
T ss_dssp --------CHHHHHHHHHHHHTCCEEEEEEET
T ss_pred CCCchHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence 742 123444444433 22578888663
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=95.27 E-value=0.093 Score=51.83 Aligned_cols=103 Identities=22% Similarity=0.280 Sum_probs=63.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh--hhHHHHHhcCCcEEecCCCCCc---hHHHHHHhhcCCCccE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP--KKFDRAKNFGVTEFVNPKDHDK---PIQQVLVDLTDGGVDY 259 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~--~~~~~~~~~g~~~vi~~~~~~~---~~~~~~~~~~~gg~dv 259 (371)
.|+++||+|+ +++|.+.++.+...|+ +|++.++.. +..+.+++.|...+....+... .+.+.+.+.. |.+|+
T Consensus 321 ~gkvalVTGas~GIG~a~A~~la~~Ga-~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~-G~iDi 398 (604)
T 2et6_A 321 KDKVVLITGAGAGLGKEYAKWFAKYGA-KVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKY-GTIDI 398 (604)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHH-SCCCE
T ss_pred CCCeEEEECcchHHHHHHHHHHHHCCC-EEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhc-CCCCE
Confidence 4788999988 8999999999989999 888886432 2223344455543333333101 1222222222 47999
Q ss_pred EEEccCCH-------------------------HHHHHHHHHhc-cCCceEEEEccC
Q 017431 260 SFECIGNV-------------------------SVMRAALECCH-KGWGTSVIVGVA 290 (371)
Q Consensus 260 vid~~g~~-------------------------~~~~~~~~~l~-~~~G~iv~~g~~ 290 (371)
++++.|-. .+.+.++..|. .++|+||.+++.
T Consensus 399 LVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ 455 (604)
T 2et6_A 399 LVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITST 455 (604)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCh
Confidence 99988840 13455666663 223899999763
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=95.27 E-value=0.052 Score=49.05 Aligned_cols=100 Identities=19% Similarity=0.134 Sum_probs=61.2
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc-----CCc-EEe---cCCCCCchHHHHHHhhc
Q 017431 184 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-----GVT-EFV---NPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 184 ~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~-----g~~-~vi---~~~~~~~~~~~~~~~~~ 253 (371)
..++.+|||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+. +.. ..+ |..+ .+ .+.+..
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~---~~~~~~ 81 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLK--QG---AYDEVI 81 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTS--TT---TTTTTT
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcC--hH---HHHHHH
Confidence 346789999988 9999999998888899 899998887765433321 211 222 2222 11 122222
Q ss_pred CCCccEEEEccCCH--------------HHHHHHHHHhc--cCCceEEEEccC
Q 017431 254 DGGVDYSFECIGNV--------------SVMRAALECCH--KGWGTSVIVGVA 290 (371)
Q Consensus 254 ~gg~dvvid~~g~~--------------~~~~~~~~~l~--~~~G~iv~~g~~ 290 (371)
. ++|+||++++.. .....+++.+. .+.+++|.+++.
T Consensus 82 ~-~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~ 133 (342)
T 1y1p_A 82 K-GAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSST 133 (342)
T ss_dssp T-TCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCG
T ss_pred c-CCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccH
Confidence 1 699999988741 11233444443 222689888763
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=95.25 E-value=0.15 Score=43.09 Aligned_cols=75 Identities=15% Similarity=0.053 Sum_probs=53.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCH
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 267 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~ 267 (371)
+|+|+|+|.+|...++.+...|. .|+++++++++.+.+. +++...+. -.. .-.+.+.+..-.++|+++-+++..
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~~~~~i~-gd~---~~~~~l~~a~i~~ad~vi~~~~~d 76 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKLKATIIH-GDG---SHKEILRDAEVSKNDVVVILTPRD 76 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHSSSEEEE-SCT---TSHHHHHHHTCCTTCEEEECCSCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHcCCeEEE-cCC---CCHHHHHhcCcccCCEEEEecCCc
Confidence 58899999999999999999999 8999999999887654 46654332 222 112234443223799999999985
Q ss_pred H
Q 017431 268 S 268 (371)
Q Consensus 268 ~ 268 (371)
.
T Consensus 77 ~ 77 (218)
T 3l4b_C 77 E 77 (218)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=95.24 E-value=0.052 Score=46.49 Aligned_cols=99 Identities=18% Similarity=0.222 Sum_probs=58.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHHhcCCcEE-ecCCCCCchHHHHHHhhcCCCccEEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFE 262 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~-~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~gg~dvvid 262 (371)
.+.+|||+|+ |.+|.+.++.+...|+. +|+++++++++.+....-+...+ .|..+ . +.+.+... ++|++++
T Consensus 17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d--~---~~~~~~~~-~~d~vi~ 90 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEK--L---DDYASAFQ-GHDVGFC 90 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGG--G---GGGGGGGS-SCSEEEE
T ss_pred cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCC--H---HHHHHHhc-CCCEEEE
Confidence 3579999987 99999999888888873 68888777654322111122111 22211 1 12223222 6999999
Q ss_pred ccCCHH--------------HHHHHHHHhcc-CCceEEEEccC
Q 017431 263 CIGNVS--------------VMRAALECCHK-GWGTSVIVGVA 290 (371)
Q Consensus 263 ~~g~~~--------------~~~~~~~~l~~-~~G~iv~~g~~ 290 (371)
++|... ....+++.+.. +.+++|.+++.
T Consensus 91 ~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~ 133 (242)
T 2bka_A 91 CLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSK 133 (242)
T ss_dssp CCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccC
Confidence 998621 12233444433 22689988764
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=95.24 E-value=0.082 Score=50.84 Aligned_cols=82 Identities=21% Similarity=0.283 Sum_probs=52.9
Q ss_pred CCCC--CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-------hHHHHHhcCCcEEe---cCCCCCchHHHHHH
Q 017431 184 VEPG--SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-------KFDRAKNFGVTEFV---NPKDHDKPIQQVLV 250 (371)
Q Consensus 184 ~~~g--~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~-------~~~~~~~~g~~~vi---~~~~~~~~~~~~~~ 250 (371)
++++ .++||+|+ |++|.+.++.+...|+++|+.+.++.. ..+.+++.|....+ |..+ .......+.
T Consensus 234 ~~~~~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd-~~~v~~~~~ 312 (496)
T 3mje_A 234 KRPPVHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAAD-REALAALLA 312 (496)
T ss_dssp CCCCCCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHH
T ss_pred CCCCCCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHH
Confidence 3455 89999987 999999888888889978888877532 12234456654332 2222 123333444
Q ss_pred hhcCC-CccEEEEccCC
Q 017431 251 DLTDG-GVDYSFECIGN 266 (371)
Q Consensus 251 ~~~~g-g~dvvid~~g~ 266 (371)
+.... ++|++|++.|.
T Consensus 313 ~i~~~g~ld~vVh~AGv 329 (496)
T 3mje_A 313 ELPEDAPLTAVFHSAGV 329 (496)
T ss_dssp TCCTTSCEEEEEECCCC
T ss_pred HHHHhCCCeEEEECCcc
Confidence 43333 79999998874
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.23 E-value=0.052 Score=46.61 Aligned_cols=79 Identities=14% Similarity=0.173 Sum_probs=49.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCC------eEEEEcCChhhHHHHH-h---cCCcE-E--ecCCCCCchHHHHHHhh
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGAS------RVIGIDIDPKKFDRAK-N---FGVTE-F--VNPKDHDKPIQQVLVDL 252 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~------~v~~v~~~~~~~~~~~-~---~g~~~-v--i~~~~~~~~~~~~~~~~ 252 (371)
+++|||+|+ |.+|.+.++.+...|+. +|+++++++++.+.+. + .+... . .|..+ ...+...+.+.
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~ 80 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISD-MADVRRLTTHI 80 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTS-HHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCC-HHHHHHHHHHH
Confidence 568999988 99999988888888885 7888888877655332 2 24322 1 23222 12222222222
Q ss_pred c--CCCccEEEEccCC
Q 017431 253 T--DGGVDYSFECIGN 266 (371)
Q Consensus 253 ~--~gg~dvvid~~g~ 266 (371)
. .+++|++++++|.
T Consensus 81 ~~~~g~id~li~~Ag~ 96 (244)
T 2bd0_A 81 VERYGHIDCLVNNAGV 96 (244)
T ss_dssp HHHTSCCSEEEECCCC
T ss_pred HHhCCCCCEEEEcCCc
Confidence 1 2379999998873
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=95.23 E-value=0.037 Score=47.52 Aligned_cols=78 Identities=15% Similarity=0.131 Sum_probs=48.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHHHH----HhcCCcE-E-e--cCCCCCchHHHHHHhhc--C
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDRA----KNFGVTE-F-V--NPKDHDKPIQQVLVDLT--D 254 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v-~~~~~~~~~~----~~~g~~~-v-i--~~~~~~~~~~~~~~~~~--~ 254 (371)
+++|||+|+ |.+|.+.++.+...|+ +|+++ ++++++.+.+ ++.+... . + |..+ .....+.+.+.. -
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 78 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGF-ALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLE-AEAATALVHQAAEVL 78 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCC-HHHHHHHHHHHHHhc
Confidence 368999988 9999999988888999 78887 7777655432 2234322 1 2 3332 122222222221 1
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|++++++|.
T Consensus 79 ~~~d~li~~Ag~ 90 (245)
T 2ph3_A 79 GGLDTLVNNAGI 90 (245)
T ss_dssp TCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 379999998873
|
| >3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} | Back alignment and structure |
|---|
Probab=95.23 E-value=0.16 Score=45.18 Aligned_cols=87 Identities=20% Similarity=0.303 Sum_probs=59.8
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCH
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 267 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~ 267 (371)
.+|.|+|+|.+|...+..+...|. +|++.++++++.+.+.+.|.. + . .+..+.+. .+|+|+-|++.+
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~-~--~----~~~~~~~~-----~~D~vi~~vp~~ 71 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGV-TVYAFDLMEANVAAVVAQGAQ-A--C----ENNQKVAA-----ASDIIFTSLPNA 71 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHTTTCE-E--C----SSHHHHHH-----HCSEEEECCSSH
T ss_pred CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCe-e--c----CCHHHHHh-----CCCEEEEECCCH
Confidence 479999999999998888888898 899999998888777766642 1 1 12333332 389999999765
Q ss_pred HHHHHHH-------HHhccCCceEEEEc
Q 017431 268 SVMRAAL-------ECCHKGWGTSVIVG 288 (371)
Q Consensus 268 ~~~~~~~-------~~l~~~~G~iv~~g 288 (371)
..++..+ ..+.++ ..++.++
T Consensus 72 ~~~~~v~~~~~~l~~~l~~~-~~vv~~~ 98 (301)
T 3cky_A 72 GIVETVMNGPGGVLSACKAG-TVIVDMS 98 (301)
T ss_dssp HHHHHHHHSTTCHHHHSCTT-CEEEECC
T ss_pred HHHHHHHcCcchHhhcCCCC-CEEEECC
Confidence 5454444 345554 5555553
|
| >2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes} | Back alignment and structure |
|---|
Probab=95.23 E-value=0.0095 Score=54.91 Aligned_cols=106 Identities=17% Similarity=0.099 Sum_probs=68.8
Q ss_pred hhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh----h--------hHHHHHhcCCcEEecCCCC
Q 017431 174 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP----K--------KFDRAKNFGVTEFVNPKDH 241 (371)
Q Consensus 174 a~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~----~--------~~~~~~~~g~~~vi~~~~~ 241 (371)
-+.++.-...--+..+|+|.|+|..|..+++++..+|+++|+.++++- + +..++++... ...
T Consensus 175 ll~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~------~~~ 248 (398)
T 2a9f_A 175 IFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNR------EFK 248 (398)
T ss_dssp HHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHHSC------TTC
T ss_pred HHHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhccCc------ccc
Confidence 344443333344567999999999999999999999999999998862 1 1112221110 000
Q ss_pred CchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCC
Q 017431 242 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 242 ~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
..++.+.++ ++|++|-+++..-.-+..++.|+++ ..++.++++.
T Consensus 249 ~~~L~eav~-----~ADV~IG~Sapgl~T~EmVk~Ma~~-pIIfalsNPt 292 (398)
T 2a9f_A 249 SGTLEDALE-----GADIFIGVSAPGVLKAEWISKMAAR-PVIFAMANPI 292 (398)
T ss_dssp CCSCSHHHH-----TTCSEEECCSTTCCCHHHHHTSCSS-CEEEECCSSS
T ss_pred hhhHHHHhc-----cCCEEEecCCCCCCCHHHHHhhCCC-CEEEECCCCC
Confidence 122333333 4799998877434457888999996 8888887754
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=95.22 E-value=0.094 Score=46.93 Aligned_cols=72 Identities=17% Similarity=0.206 Sum_probs=46.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE-ecCCCCCchHHHHHHhhcCC-CccEEE
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDG-GVDYSF 261 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~g-g~dvvi 261 (371)
.+..+|||+|+ |.+|...++.+...|+ +|+++++++++ +. ++...+ .|..+ .+ .+.+...+ ++|+||
T Consensus 10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~-~~---l~~~~~~~Dl~d--~~---~~~~~~~~~~~d~vi 79 (321)
T 2pk3_A 10 HGSMRALITGVAGFVGKYLANHLTEQNV-EVFGTSRNNEA-KL---PNVEMISLDIMD--SQ---RVKKVISDIKPDYIF 79 (321)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCTTC-CC---TTEEEEECCTTC--HH---HHHHHHHHHCCSEEE
T ss_pred cCcceEEEECCCChHHHHHHHHHHHCCC-EEEEEecCCcc-cc---ceeeEEECCCCC--HH---HHHHHHHhcCCCEEE
Confidence 45678999988 9999999999888999 89999887654 11 232221 22222 22 22222222 699999
Q ss_pred EccCC
Q 017431 262 ECIGN 266 (371)
Q Consensus 262 d~~g~ 266 (371)
++++.
T Consensus 80 h~A~~ 84 (321)
T 2pk3_A 80 HLAAK 84 (321)
T ss_dssp ECCSC
T ss_pred EcCcc
Confidence 99874
|
| >3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum} | Back alignment and structure |
|---|
Probab=95.21 E-value=0.036 Score=47.73 Aligned_cols=100 Identities=16% Similarity=0.221 Sum_probs=65.0
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----cCCcE-E-ecCCCCCchHHHHHHhhc--
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTE-F-VNPKDHDKPIQQVLVDLT-- 253 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~v~~v~~~~~~~~~~~~----~g~~~-v-i~~~~~~~~~~~~~~~~~-- 253 (371)
...++++||-+|+| .|..++.+++.+. -.+|++++.+++..+.+++ .|... + +.. .+..+.+..+.
T Consensus 67 ~~~~~~~VLeiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~----gda~~~l~~l~~~ 141 (237)
T 3c3y_A 67 KLVNAKKTIEVGVF-TGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIE----SDAMLALDNLLQG 141 (237)
T ss_dssp HHTTCCEEEEECCT-TSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE----SCHHHHHHHHHHS
T ss_pred HhhCCCEEEEeCCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE----cCHHHHHHHHHhc
Confidence 34567899999886 5777788888864 2399999999987776653 35421 1 111 12223333221
Q ss_pred ---CCCccEEEEccCC---HHHHHHHHHHhccCCceEEEEc
Q 017431 254 ---DGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 254 ---~gg~dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~g 288 (371)
.+.||+||-.... ...++.+.+.|++| |.++.-.
T Consensus 142 ~~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pG-G~lv~d~ 181 (237)
T 3c3y_A 142 QESEGSYDFGFVDADKPNYIKYHERLMKLVKVG-GIVAYDN 181 (237)
T ss_dssp TTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred cCCCCCcCEEEECCchHHHHHHHHHHHHhcCCC-eEEEEec
Confidence 3479999854332 35688899999997 9887543
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=95.21 E-value=0.015 Score=50.95 Aligned_cols=76 Identities=12% Similarity=0.164 Sum_probs=48.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE-EecCCCCCchHHHHHHhhcC--CCccEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTD--GGVDYSF 261 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~~~~~~~~--gg~dvvi 261 (371)
.++++||+|+ |++|.+.+..+...|+ +|++++++.++.+. ..... ..|..+ .....+.+.+... +++|+++
T Consensus 27 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~---~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD~lv 101 (260)
T 3un1_A 27 QQKVVVITGASQGIGAGLVRAYRDRNY-RVVATSRSIKPSAD---PDIHTVAGDISK-PETADRIVREGIERFGRIDSLV 101 (260)
T ss_dssp TCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCCCCSS---TTEEEEESCTTS-HHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccc---CceEEEEccCCC-HHHHHHHHHHHHHHCCCCCEEE
Confidence 4689999988 9999999998888999 89999887654221 11111 123322 1222222322221 3799999
Q ss_pred EccCC
Q 017431 262 ECIGN 266 (371)
Q Consensus 262 d~~g~ 266 (371)
+++|.
T Consensus 102 ~nAg~ 106 (260)
T 3un1_A 102 NNAGV 106 (260)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 98874
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=95.21 E-value=0.079 Score=50.88 Aligned_cols=83 Identities=18% Similarity=0.230 Sum_probs=53.8
Q ss_pred CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh----H---HHHHhcCCcEE---ecCCCCCchHHHHHHh
Q 017431 183 KVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK----F---DRAKNFGVTEF---VNPKDHDKPIQQVLVD 251 (371)
Q Consensus 183 ~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~----~---~~~~~~g~~~v---i~~~~~~~~~~~~~~~ 251 (371)
.++++.++||+|+ |++|...+..+...|+++|+.+.++... . +.+++.|.... .|..+ .......+.+
T Consensus 222 ~~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d-~~~v~~~~~~ 300 (486)
T 2fr1_A 222 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTD-RESVRELLGG 300 (486)
T ss_dssp CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHT
T ss_pred CcCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCC-HHHHHHHHHH
Confidence 3578899999987 9999998888878899668888887641 1 22344565322 22222 1233334444
Q ss_pred hcC-CCccEEEEccCC
Q 017431 252 LTD-GGVDYSFECIGN 266 (371)
Q Consensus 252 ~~~-gg~dvvid~~g~ 266 (371)
... +.+|.+|++.|.
T Consensus 301 i~~~g~ld~VIh~AG~ 316 (486)
T 2fr1_A 301 IGDDVPLSAVFHAAAT 316 (486)
T ss_dssp SCTTSCEEEEEECCCC
T ss_pred HHhcCCCcEEEECCcc
Confidence 422 278999999884
|
| >2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A | Back alignment and structure |
|---|
Probab=95.20 E-value=0.02 Score=50.37 Aligned_cols=94 Identities=19% Similarity=0.227 Sum_probs=62.4
Q ss_pred ccccchhhhhhhhhcCCCCCCCEEEEEcCC-hHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCc
Q 017431 167 LGCGVPTGLGAVWNTAKVEPGSIVAVFGLG-TVGLAVAEGAKAA--GASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDK 243 (371)
Q Consensus 167 ~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag-~vG~~ai~la~~~--g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~ 243 (371)
+||+...+...+.+..---.|++++|+|+| .+|..+.+++... |+ .|+.+.+.. .
T Consensus 138 ~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~a-tVtv~h~~t---------------------~ 195 (281)
T 2c2x_A 138 LPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENA-TVTLCHTGT---------------------R 195 (281)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCC-EEEEECTTC---------------------S
T ss_pred CCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCC-EEEEEECch---------------------h
Confidence 344433344434333334589999999997 5799999999988 78 787774322 2
Q ss_pred hHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 244 PIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 244 ~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
++.+.++ .+|++|.++|.++.+ .-++++++ ..+|++|..
T Consensus 196 ~L~~~~~-----~ADIVI~Avg~p~~I--~~~~vk~G-avVIDVgi~ 234 (281)
T 2c2x_A 196 DLPALTR-----QADIVVAAVGVAHLL--TADMVRPG-AAVIDVGVS 234 (281)
T ss_dssp CHHHHHT-----TCSEEEECSCCTTCB--CGGGSCTT-CEEEECCEE
T ss_pred HHHHHHh-----hCCEEEECCCCCccc--CHHHcCCC-cEEEEccCC
Confidence 2333332 499999999997642 23447786 888888774
|
| >3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=95.18 E-value=0.074 Score=45.18 Aligned_cols=97 Identities=16% Similarity=0.297 Sum_probs=64.0
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCC-cEEecCCCCCchHHHHHHhhcCCCc
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGV-TEFVNPKDHDKPIQQVLVDLTDGGV 257 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~-~~vi~~~~~~~~~~~~~~~~~~gg~ 257 (371)
.++++++||=+|+|..|..++.+++..+. +|++++.+++..+.+++ .+. ..++..+- .. +....++.|
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~--~~----~~~~~~~~f 124 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFFNC-KVTATEVDEEFFEYARRNIERNNSNVRLVKSNG--GI----IKGVVEGTF 124 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHTTCCCEEEECSS--CS----STTTCCSCE
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCc--hh----hhhcccCce
Confidence 35688999999888677788888887666 99999999987776653 343 12222211 00 111222479
Q ss_pred cEEEEccCC-------------------------HHHHHHHHHHhccCCceEEEE
Q 017431 258 DYSFECIGN-------------------------VSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 258 dvvid~~g~-------------------------~~~~~~~~~~l~~~~G~iv~~ 287 (371)
|+|+....- ...++.+.+.|+++ |+++.+
T Consensus 125 D~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~ 178 (230)
T 3evz_A 125 DVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPG-GKVALY 178 (230)
T ss_dssp EEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEE-EEEEEE
T ss_pred eEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCC-eEEEEE
Confidence 999953110 34578888889996 998875
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=95.18 E-value=0.035 Score=47.93 Aligned_cols=98 Identities=21% Similarity=0.162 Sum_probs=58.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHH-cCCCeEEEEcCChh-hHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKA-AGASRVIGIDIDPK-KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE 262 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~-~g~~~v~~v~~~~~-~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid 262 (371)
+++++||+|+ +++|.+.++.+.. .|+ +|+.++++++ ..+.+. ....|..+ .....+.+.....+++|++++
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~-~v~~~~~~~~~~~~~~~----~~~~Dv~~-~~~v~~~~~~~~~~~id~lv~ 76 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNH-TVINIDIQQSFSAENLK----FIKADLTK-QQDITNVLDIIKNVSFDGIFL 76 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTE-EEEEEESSCCCCCTTEE----EEECCTTC-HHHHHHHHHHTTTCCEEEEEE
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCc-EEEEeccccccccccce----EEecCcCC-HHHHHHHHHHHHhCCCCEEEE
Confidence 4678999988 9999987766655 677 8888877655 211110 01123333 123333343333338999999
Q ss_pred ccCCH----------H---------------HHHHHHHHhccCCceEEEEccC
Q 017431 263 CIGNV----------S---------------VMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 263 ~~g~~----------~---------------~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+.|.. + +.+.++..+.++ |++|.+++.
T Consensus 77 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-g~iv~~sS~ 128 (244)
T 4e4y_A 77 NAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG-ASIVFNGSD 128 (244)
T ss_dssp CCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE-EEEEEECCG
T ss_pred CCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC-cEEEEECCH
Confidence 88851 1 233344455665 899988764
|
| >2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17 | Back alignment and structure |
|---|
Probab=95.16 E-value=0.036 Score=50.00 Aligned_cols=96 Identities=19% Similarity=0.096 Sum_probs=62.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC--------cE-EecCCCCCchHHHHHHhhcCCC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV--------TE-FVNPKDHDKPIQQVLVDLTDGG 256 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~--------~~-vi~~~~~~~~~~~~~~~~~~gg 256 (371)
++++||++|+| .|..+..+++..+..+|++++.+++-.+.+++.-. .. -+.. .+..+.+.. ..+.
T Consensus 108 ~~~~VLdIG~G-~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~----~D~~~~l~~-~~~~ 181 (314)
T 2b2c_A 108 DPKRVLIIGGG-DGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFC----GDGFEFLKN-HKNE 181 (314)
T ss_dssp SCCEEEEESCT-TSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEEC----SCHHHHHHH-CTTC
T ss_pred CCCEEEEEcCC-cCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEE----ChHHHHHHh-cCCC
Confidence 45899999885 36666677776555599999999998888875321 11 1111 233333333 3348
Q ss_pred ccEEEEccCC----------HHHHHHHHHHhccCCceEEEEc
Q 017431 257 VDYSFECIGN----------VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 257 ~dvvid~~g~----------~~~~~~~~~~l~~~~G~iv~~g 288 (371)
||+|+..... ...++.+.+.|+++ |.++...
T Consensus 182 fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~Lkpg-G~lv~~~ 222 (314)
T 2b2c_A 182 FDVIITDSSDPVGPAESLFGQSYYELLRDALKED-GILSSQG 222 (314)
T ss_dssp EEEEEECCC-------------HHHHHHHHEEEE-EEEEEEC
T ss_pred ceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCC-eEEEEEC
Confidence 9999853321 35688899999997 9988764
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=95.11 E-value=0.04 Score=49.91 Aligned_cols=75 Identities=20% Similarity=0.144 Sum_probs=47.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHh----cCCc-EEe--cCCCCCchHHHHHHhhcC-C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKN----FGVT-EFV--NPKDHDKPIQQVLVDLTD-G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~----~g~~-~vi--~~~~~~~~~~~~~~~~~~-g 255 (371)
.+.+|||+|+ |.+|.+.++.+...|+ +|++++++.++.+ .+++ .+.. ..+ |..+ .+ .+.+... +
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~---~~~~~~~~~ 77 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGY-DVVIADNLVNSKREAIARIEKITGKTPAFHETDVSD--ER---ALARIFDAH 77 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTC--HH---HHHHHHHHS
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCC-cEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCC--HH---HHHHHHhcc
Confidence 4579999988 9999999999999999 8999887654322 2211 1221 222 2222 22 2222222 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|+++++++.
T Consensus 78 ~~d~vih~A~~ 88 (341)
T 3enk_A 78 PITAAIHFAAL 88 (341)
T ss_dssp CCCEEEECCCC
T ss_pred CCcEEEECccc
Confidence 79999999874
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=95.11 E-value=0.061 Score=52.19 Aligned_cols=83 Identities=14% Similarity=0.134 Sum_probs=52.8
Q ss_pred CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCCh-------------hh----HHHHHhcCCcEEe---cCCC
Q 017431 183 KVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDP-------------KK----FDRAKNFGVTEFV---NPKD 240 (371)
Q Consensus 183 ~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v-~~~~-------------~~----~~~~~~~g~~~vi---~~~~ 240 (371)
.++++.++||+|+ |++|.+.++.+...|+++++.+ .++. ++ .+.+++.|....+ |..+
T Consensus 247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd 326 (525)
T 3qp9_A 247 WWQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTD 326 (525)
T ss_dssp SSCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTS
T ss_pred eecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCC
Confidence 4678899999987 9999998888878899667777 7762 11 2233445653322 2222
Q ss_pred CCchHHHHHHhhcC-CCccEEEEccCC
Q 017431 241 HDKPIQQVLVDLTD-GGVDYSFECIGN 266 (371)
Q Consensus 241 ~~~~~~~~~~~~~~-gg~dvvid~~g~ 266 (371)
.......+.+... +.+|.+|++.|.
T Consensus 327 -~~~v~~~~~~i~~~g~id~vVh~AGv 352 (525)
T 3qp9_A 327 -AEAAARLLAGVSDAHPLSAVLHLPPT 352 (525)
T ss_dssp -HHHHHHHHHTSCTTSCEEEEEECCCC
T ss_pred -HHHHHHHHHHHHhcCCCcEEEECCcC
Confidence 1233334444432 279999999884
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=95.11 E-value=0.081 Score=46.64 Aligned_cols=79 Identities=18% Similarity=0.341 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-Ch--HHHHHHHHHHHcCCCeEEEEcCCh--hhHHHH-HhcCCcEEe--cCCCCCchHHHHHHhhc--CC
Q 017431 186 PGSIVAVFGL-GT--VGLAVAEGAKAAGASRVIGIDIDP--KKFDRA-KNFGVTEFV--NPKDHDKPIQQVLVDLT--DG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~--vG~~ai~la~~~g~~~v~~v~~~~--~~~~~~-~~~g~~~vi--~~~~~~~~~~~~~~~~~--~g 255 (371)
+++++||+|+ |. +|.+.++.+...|+ +|++++++. +..+.+ ++.+....+ |..+ .....+.+.+.. -+
T Consensus 25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g 102 (280)
T 3nrc_A 25 AGKKILITGLLSNKSIAYGIAKAMHREGA-ELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVIS-DQEIKDLFVELGKVWD 102 (280)
T ss_dssp TTCEEEECCCCSTTCHHHHHHHHHHHTTC-EEEEEECTTCHHHHHHHHGGGCCSEEEECCTTC-HHHHHHHHHHHHHHCS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHcCC-EEEEeeCchHHHHHHHHHHhcCCceEEEeecCC-HHHHHHHHHHHHHHcC
Confidence 5689999985 44 99998888888999 899988876 444444 334432332 3322 122222222221 23
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
.+|++++++|.
T Consensus 103 ~id~li~nAg~ 113 (280)
T 3nrc_A 103 GLDAIVHSIAF 113 (280)
T ss_dssp SCCEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 79999998873
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=95.10 E-value=0.092 Score=49.86 Aligned_cols=92 Identities=12% Similarity=0.006 Sum_probs=55.6
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCcEE--ecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEF--VNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~v--i~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
+++|+|+|+|.+|.+.+..+...|+ +|++++++.++.+.+. +++.... .+..+ + +.+.+... ++|+|++|
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~G~-~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d----~-~~l~~~l~-~~DvVIn~ 75 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLDVND----D-AALDAEVA-KHDLVISL 75 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESSHHHHHHTTTTCTTEEEEECCTTC----H-HHHHHHHT-TSSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcC-EEEEEECCHHHHHHHHHhcCCceEEEeecCC----H-HHHHHHHc-CCcEEEEC
Confidence 5789999999999998888888898 7888988887665443 3432122 23222 1 12222222 69999999
Q ss_pred cCCHHHHHHHHHHhccCCceEEE
Q 017431 264 IGNVSVMRAALECCHKGWGTSVI 286 (371)
Q Consensus 264 ~g~~~~~~~~~~~l~~~~G~iv~ 286 (371)
++..........++..+ ..++.
T Consensus 76 a~~~~~~~i~~a~l~~g-~~vvd 97 (450)
T 1ff9_A 76 IPYTFHATVIKSAIRQK-KHVVT 97 (450)
T ss_dssp CC--CHHHHHHHHHHHT-CEEEE
T ss_pred CccccchHHHHHHHhCC-CeEEE
Confidence 98632223344455553 44443
|
| >4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=95.09 E-value=0.067 Score=49.17 Aligned_cols=87 Identities=20% Similarity=0.298 Sum_probs=57.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
.|++|.|+|.|.+|...++.++.+|+ +|++.++... .+.+.+.|+.. .++.+.+. ..|+|+-++.
T Consensus 175 ~gktvGIIGlG~IG~~vA~~l~~fG~-~V~~~d~~~~-~~~~~~~g~~~--------~~l~ell~-----~aDvV~l~~P 239 (365)
T 4hy3_A 175 AGSEIGIVGFGDLGKALRRVLSGFRA-RIRVFDPWLP-RSMLEENGVEP--------ASLEDVLT-----KSDFIFVVAA 239 (365)
T ss_dssp SSSEEEEECCSHHHHHHHHHHTTSCC-EEEEECSSSC-HHHHHHTTCEE--------CCHHHHHH-----SCSEEEECSC
T ss_pred CCCEEEEecCCcccHHHHHhhhhCCC-EEEEECCCCC-HHHHhhcCeee--------CCHHHHHh-----cCCEEEEcCc
Confidence 58899999999999999999999999 8999988753 34455566531 12222222 3677776554
Q ss_pred CH----HHH-HHHHHHhccCCceEEEEc
Q 017431 266 NV----SVM-RAALECCHKGWGTSVIVG 288 (371)
Q Consensus 266 ~~----~~~-~~~~~~l~~~~G~iv~~g 288 (371)
.. ..+ ...+..|+++ +.+|.++
T Consensus 240 lt~~T~~li~~~~l~~mk~g-ailIN~a 266 (365)
T 4hy3_A 240 VTSENKRFLGAEAFSSMRRG-AAFILLS 266 (365)
T ss_dssp SSCC---CCCHHHHHTSCTT-CEEEECS
T ss_pred CCHHHHhhcCHHHHhcCCCC-cEEEECc
Confidence 31 111 4556667775 7777665
|
| >3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=95.08 E-value=0.038 Score=46.85 Aligned_cols=101 Identities=20% Similarity=0.195 Sum_probs=65.6
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----cCCcE--EecCCCCCchHHHHHHhhcC-
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLVDLTD- 254 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~v~~v~~~~~~~~~~~~----~g~~~--vi~~~~~~~~~~~~~~~~~~- 254 (371)
...++.+||-+|+| .|..++.+++.++ ..+|++++.+++..+.+++ .|... .+.. .+..+.+.....
T Consensus 61 ~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~----~d~~~~~~~~~~~ 135 (225)
T 3tr6_A 61 KLMQAKKVIDIGTF-TGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRL----SPAKDTLAELIHA 135 (225)
T ss_dssp HHHTCSEEEEECCT-TSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE----SCHHHHHHHHHTT
T ss_pred HhhCCCEEEEeCCc-chHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe----CCHHHHHHHhhhc
Confidence 34567899999886 3778888888764 3499999999987776654 34421 1111 122233333221
Q ss_pred ---CCccEEEEccCC---HHHHHHHHHHhccCCceEEEEcc
Q 017431 255 ---GGVDYSFECIGN---VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 255 ---gg~dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
+.||+|+-.... ...++.+.+.|+++ |.++.-..
T Consensus 136 ~~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~~ 175 (225)
T 3tr6_A 136 GQAWQYDLIYIDADKANTDLYYEESLKLLREG-GLIAVDNV 175 (225)
T ss_dssp TCTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEECS
T ss_pred cCCCCccEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEeCC
Confidence 479999843332 34578889999997 99886543
|
| >3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=95.07 E-value=0.027 Score=48.01 Aligned_cols=95 Identities=18% Similarity=0.134 Sum_probs=66.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC-cEEecCCCCCchHHHHHHhhc-CCCccEEEE
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV-TEFVNPKDHDKPIQQVLVDLT-DGGVDYSFE 262 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~-~~vi~~~~~~~~~~~~~~~~~-~gg~dvvid 262 (371)
.++.+||-+|+| .|..+..+++. |+ +|++++.++...+.+++... ..++...- ... .... .+.||+|+.
T Consensus 47 ~~~~~vLDiGcG-~G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~-~~~-----~~~~~~~~fD~v~~ 117 (226)
T 3m33_A 47 TPQTRVLEAGCG-HGPDAARFGPQ-AA-RWAAYDFSPELLKLARANAPHADVYEWNG-KGE-----LPAGLGAPFGLIVS 117 (226)
T ss_dssp CTTCEEEEESCT-TSHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHCTTSEEEECCS-CSS-----CCTTCCCCEEEEEE
T ss_pred CCCCeEEEeCCC-CCHHHHHHHHc-CC-EEEEEECCHHHHHHHHHhCCCceEEEcch-hhc-----cCCcCCCCEEEEEe
Confidence 678899999886 36677777776 77 99999999998888876532 22221111 000 0111 247999998
Q ss_pred ccCCHHHHHHHHHHhccCCceEEEEcc
Q 017431 263 CIGNVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 263 ~~g~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
.......+..+.+.|+++ |+++..+.
T Consensus 118 ~~~~~~~l~~~~~~Lkpg-G~l~~~~~ 143 (226)
T 3m33_A 118 RRGPTSVILRLPELAAPD-AHFLYVGP 143 (226)
T ss_dssp ESCCSGGGGGHHHHEEEE-EEEEEEES
T ss_pred CCCHHHHHHHHHHHcCCC-cEEEEeCC
Confidence 766667789999999997 99995544
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=95.06 E-value=0.051 Score=47.01 Aligned_cols=38 Identities=24% Similarity=0.223 Sum_probs=30.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhhH
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKF 224 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v-~~~~~~~ 224 (371)
+++++||+|+ +++|.+.++.+...|+ +|+++ .+++++.
T Consensus 6 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~ 45 (255)
T 3icc_A 6 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEA 45 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCSHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchHHH
Confidence 5789999988 9999999998889999 77664 5555443
|
| >1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36 | Back alignment and structure |
|---|
Probab=95.03 E-value=0.11 Score=43.46 Aligned_cols=96 Identities=14% Similarity=0.114 Sum_probs=60.9
Q ss_pred hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc-CC-----------------cEEe--cCC
Q 017431 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-GV-----------------TEFV--NPK 239 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~-g~-----------------~~vi--~~~ 239 (371)
....+.++.+||.+|+| .|..+..+++. |+ +|++++.+++-.+.+++. +. -.++ +..
T Consensus 16 ~~l~~~~~~~vLD~GCG-~G~~~~~la~~-g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 92 (203)
T 1pjz_A 16 SSLNVVPGARVLVPLCG-KSQDMSWLSGQ-GY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFF 92 (203)
T ss_dssp HHHCCCTTCEEEETTTC-CSHHHHHHHHH-CC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCS
T ss_pred HhcccCCCCEEEEeCCC-CcHhHHHHHHC-CC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccc
Confidence 33456788999999886 46667777776 88 999999999988877643 11 1111 111
Q ss_pred CCCchHHHHHHhhcCCCccEEEEccC----C----HHHHHHHHHHhccCCceEEEE
Q 017431 240 DHDKPIQQVLVDLTDGGVDYSFECIG----N----VSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~gg~dvvid~~g----~----~~~~~~~~~~l~~~~G~iv~~ 287 (371)
+ ..+.+ .+.||+|++... . ...++.+.+.|+++ |+++.+
T Consensus 93 ~--l~~~~------~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~Lkpg-G~~~l~ 139 (203)
T 1pjz_A 93 A--LTARD------IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQA-CSGLLI 139 (203)
T ss_dssp S--STHHH------HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSE-EEEEEE
T ss_pred c--CCccc------CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCC-cEEEEE
Confidence 1 11110 026999997321 1 12467888999997 994433
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=95.02 E-value=0.047 Score=46.87 Aligned_cols=78 Identities=18% Similarity=0.266 Sum_probs=48.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEE-EcCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhc--CC
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIG-IDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG 255 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~-v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~--~g 255 (371)
|++|||+|+ |.+|.+.++.+...|+ +|++ ..+++++.+.+ ++.+.... .|..+ ...+.+.+.+.. .+
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 78 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK-EADVEAMMKTAIDAWG 78 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTS-HHHHHHHHHHHHHHSS
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCC-HHHHHHHHHHHHHHcC
Confidence 468999988 9999999999989999 7777 47776654432 22343221 23322 122333332221 23
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|+++++.|.
T Consensus 79 ~id~li~~Ag~ 89 (244)
T 1edo_A 79 TIDVVVNNAGI 89 (244)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999998873
|
| >2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens} | Back alignment and structure |
|---|
Probab=95.01 E-value=0.14 Score=46.23 Aligned_cols=89 Identities=16% Similarity=0.157 Sum_probs=57.5
Q ss_pred EEEEEcCChHHHHH-H-HHHHHcCCCeEEEEcCChhhHH-HHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 189 IVAVFGLGTVGLAV-A-EGAKAAGASRVIGIDIDPKKFD-RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 189 ~VlI~Gag~vG~~a-i-~la~~~g~~~v~~v~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
+|.|+|+|.+|... + .+.+ .+++.+.++++++++.+ +++++|...++ .++.+.+.+ ..+|+|+.++.
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~-~~~~~vav~d~~~~~~~~~~~~~g~~~~~------~~~~~~l~~---~~~D~V~i~tp 71 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRA-TGGEVVSMMSTSAERGAAYATENGIGKSV------TSVEELVGD---PDVDAVYVSTT 71 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHH-TTCEEEEEECSCHHHHHHHHHHTTCSCCB------SCHHHHHTC---TTCCEEEECSC
T ss_pred eEEEEcccHHHHHhhhHHhhc-CCCeEEEEECCCHHHHHHHHHHcCCCccc------CCHHHHhcC---CCCCEEEEeCC
Confidence 58899999999875 5 4444 77733445677777654 45667763222 233333321 26999999998
Q ss_pred CHHHHHHHHHHhccCCceEEEEcc
Q 017431 266 NVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 266 ~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
.....+.+..++.. |+-|.+..
T Consensus 72 ~~~h~~~~~~al~~--Gk~v~~ek 93 (332)
T 2glx_A 72 NELHREQTLAAIRA--GKHVLCEK 93 (332)
T ss_dssp GGGHHHHHHHHHHT--TCEEEECS
T ss_pred hhHhHHHHHHHHHC--CCeEEEeC
Confidence 86667777777777 55555644
|
| >3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua} | Back alignment and structure |
|---|
Probab=95.01 E-value=0.093 Score=48.22 Aligned_cols=90 Identities=24% Similarity=0.224 Sum_probs=63.4
Q ss_pred CEEEEEcCChHHHHHHHHHHHc-CCCeEE-EEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAA-GASRVI-GIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~-g~~~v~-~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
-+|.|+|+|.+|...+..++.. ++ +++ ++++++++.+.++++|+. . + .++.+.+.+ ..+|+|+.|+.
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~a~~~g~~-~--~----~~~~~ll~~---~~~D~V~i~tp 74 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAADNL-EVHGVFDILAEKREAAAQKGLK-I--Y----ESYEAVLAD---EKVDAVLIATP 74 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTE-EEEEEECSSHHHHHHHHTTTCC-B--C----SCHHHHHHC---TTCCEEEECSC
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCc-EEEEEEcCCHHHHHHHHhcCCc-e--e----CCHHHHhcC---CCCCEEEEcCC
Confidence 3688999999998877777666 66 555 457788887777777763 1 2 234444432 27999999998
Q ss_pred CHHHHHHHHHHhccCCceEEEEccC
Q 017431 266 NVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 266 ~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
.....+.+.+++.. |+-|.+..+
T Consensus 75 ~~~h~~~~~~al~a--GkhVl~EKP 97 (359)
T 3e18_A 75 NDSHKELAISALEA--GKHVVCEKP 97 (359)
T ss_dssp GGGHHHHHHHHHHT--TCEEEEESS
T ss_pred cHHHHHHHHHHHHC--CCCEEeeCC
Confidence 87667888888887 455656543
|
| >1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A | Back alignment and structure |
|---|
Probab=94.98 E-value=0.084 Score=44.80 Aligned_cols=102 Identities=17% Similarity=0.250 Sum_probs=64.1
Q ss_pred hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHH----hcCCcEEecCCCCCchHHHHHHhhcC
Q 017431 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~v~~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~ 254 (371)
....+.++++||-+|+|. |..+..+++..|. .+|++++.+++..+.++ +.....++...-..... . ....
T Consensus 67 ~~~~~~~~~~vLDlG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~---~-~~~~ 141 (227)
T 1g8a_A 67 KNFPIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEE---Y-RALV 141 (227)
T ss_dssp CCCCCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGG---G-TTTC
T ss_pred HhcCCCCCCEEEEEeccC-CHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcch---h-hccc
Confidence 344578899999999875 8888888888752 48999999996554443 22111222211100100 0 1112
Q ss_pred CCccEEEEccCCH----HHHHHHHHHhccCCceEEEE
Q 017431 255 GGVDYSFECIGNV----SVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 255 gg~dvvid~~g~~----~~~~~~~~~l~~~~G~iv~~ 287 (371)
+.+|+|+.....+ ..+..+.+.|+++ |+++..
T Consensus 142 ~~~D~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~ 177 (227)
T 1g8a_A 142 PKVDVIFEDVAQPTQAKILIDNAEVYLKRG-GYGMIA 177 (227)
T ss_dssp CCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred CCceEEEECCCCHhHHHHHHHHHHHhcCCC-CEEEEE
Confidence 3799999655443 2378889999997 998876
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=94.97 E-value=0.076 Score=47.44 Aligned_cols=92 Identities=17% Similarity=0.168 Sum_probs=57.5
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCC
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 266 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~ 266 (371)
.+|||+|+ |.+|...++.+...|. +|+++++++.+.+ +. +.. ++. .+ -. .+.+.+... ++|+||++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-~~--~~~-~~~-~D--l~-~~~~~~~~~-~~d~Vih~a~~ 72 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKNDGN-TPIILTRSIGNKA-IN--DYE-YRV-SD--YT-LEDLINQLN-DVDAVVHLAAT 72 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCC--------CCE-EEE-CC--CC-HHHHHHHTT-TCSEEEECCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCCCCccc-CC--ceE-EEE-cc--cc-HHHHHHhhc-CCCEEEEcccc
Confidence 68999988 9999999999999999 8999988855544 33 332 221 12 22 344555443 79999998874
Q ss_pred H-------------HHHHHHHHHhccC-CceEEEEcc
Q 017431 267 V-------------SVMRAALECCHKG-WGTSVIVGV 289 (371)
Q Consensus 267 ~-------------~~~~~~~~~l~~~-~G~iv~~g~ 289 (371)
. .....+++.+... -.++|.+++
T Consensus 73 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS 109 (311)
T 3m2p_A 73 RGSQGKISEFHDNEILTQNLYDACYENNISNIVYAST 109 (311)
T ss_dssp CCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 1 1123444444432 246887765
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=94.94 E-value=0.22 Score=45.74 Aligned_cols=91 Identities=13% Similarity=0.229 Sum_probs=60.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCC
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 266 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~ 266 (371)
..+|.|+|.|.+|...+..+...|. .|++.++++++.+.+.+.|+.. . .+..+.+... ..+|+||-|+..
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~g~~~---~----~s~~e~~~~a--~~~DvVi~~vp~ 91 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALEREGIAG---A----RSIEEFCAKL--VKPRVVWLMVPA 91 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCBC---C----SSHHHHHHHS--CSSCEEEECSCG
T ss_pred CCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCEE---e----CCHHHHHhcC--CCCCEEEEeCCH
Confidence 3689999999999998888888998 8999999999888887776531 1 2233333331 135888888877
Q ss_pred HHHHHHHHH----HhccCCceEEEEcc
Q 017431 267 VSVMRAALE----CCHKGWGTSVIVGV 289 (371)
Q Consensus 267 ~~~~~~~~~----~l~~~~G~iv~~g~ 289 (371)
. .++..++ .+.++ ..+|..+.
T Consensus 92 ~-~v~~vl~~l~~~l~~g-~iiId~st 116 (358)
T 4e21_A 92 A-VVDSMLQRMTPLLAAN-DIVIDGGN 116 (358)
T ss_dssp G-GHHHHHHHHGGGCCTT-CEEEECSS
T ss_pred H-HHHHHHHHHHhhCCCC-CEEEeCCC
Confidence 5 3333333 34443 45555543
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=94.94 E-value=0.1 Score=45.45 Aligned_cols=79 Identities=23% Similarity=0.416 Sum_probs=48.7
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChh---hHHHH-HhcCCcEEe--cCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPK---KFDRA-KNFGVTEFV--NPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga---g~vG~~ai~la~~~g~~~v~~v~~~~~---~~~~~-~~~g~~~vi--~~~~~~~~~~~~~~~~~~-- 254 (371)
+++++||+|+ |++|.+.++.+...|+ +|++++++++ ..+.+ .+.+....+ |..+ .....+.+.+...
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~ 84 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQ-DEELDALFAGVKEAF 84 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 4689999976 5899998888888899 8999888775 22222 223432322 3333 1222222322211
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|++++++|.
T Consensus 85 g~iD~lv~~Ag~ 96 (261)
T 2wyu_A 85 GGLDYLVHAIAF 96 (261)
T ss_dssp SSEEEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 379999998873
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=94.91 E-value=0.067 Score=49.14 Aligned_cols=74 Identities=15% Similarity=0.208 Sum_probs=47.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHh-cCCcEE-ecCCCCCchHHHHHHhhcCCCccEEEE
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKN-FGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFE 262 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~-g~~~v~~v~~~~~~~~~~~~-~g~~~v-i~~~~~~~~~~~~~~~~~~gg~dvvid 262 (371)
+.+|||+|+ |.+|...++.+... |+ +|++++++.++.+.+.+ .+...+ .|..+ +.+....+.+ ++|+||+
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~-d~~~~~~~~~----~~d~Vih 97 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILETTDW-EVFGMDMQTDRLGDLVKHERMHFFEGDITI-NKEWVEYHVK----KCDVILP 97 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHSSC-EEEEEESCCTTTGGGGGSTTEEEEECCTTT-CHHHHHHHHH----HCSEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCC-EEEEEeCChhhhhhhccCCCeEEEeCccCC-CHHHHHHHhc----cCCEEEE
Confidence 478999988 99999998888877 88 89999888766543332 232222 22220 1222222222 5999999
Q ss_pred ccCC
Q 017431 263 CIGN 266 (371)
Q Consensus 263 ~~g~ 266 (371)
+++.
T Consensus 98 ~A~~ 101 (372)
T 3slg_A 98 LVAI 101 (372)
T ss_dssp CBCC
T ss_pred cCcc
Confidence 8774
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=94.90 E-value=0.049 Score=49.31 Aligned_cols=72 Identities=22% Similarity=0.201 Sum_probs=46.7
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE-ecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
-+|||+|+ |.+|...++.+...|+ +|++++++.++.+.+.+.+...+ .|..+ . +.+.+... ++|+||++++
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d--~---~~~~~~~~-~~d~vih~a~ 86 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGH-DLVLIHRPSSQIQRLAYLEPECRVAEMLD--H---AGLERALR-GLDGVIFSAG 86 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECTTSCGGGGGGGCCEEEECCTTC--H---HHHHHHTT-TCSEEEEC--
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecChHhhhhhccCCeEEEEecCCC--H---HHHHHHHc-CCCEEEECCc
Confidence 37999988 9999999999888998 89999887765443333344322 22222 2 23333332 6999999887
Q ss_pred C
Q 017431 266 N 266 (371)
Q Consensus 266 ~ 266 (371)
.
T Consensus 87 ~ 87 (342)
T 2x4g_A 87 Y 87 (342)
T ss_dssp -
T ss_pred c
Confidence 4
|
| >3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A* | Back alignment and structure |
|---|
Probab=94.89 E-value=0.042 Score=46.56 Aligned_cols=100 Identities=17% Similarity=0.163 Sum_probs=65.0
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHh----cCCcE--EecCCCCCchHHHHHHhhc-
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAA--GASRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLVDLT- 253 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~--g~~~v~~v~~~~~~~~~~~~----~g~~~--vi~~~~~~~~~~~~~~~~~- 253 (371)
...++.+||-+|+| .|..++.+++.. +. +|++++.+++..+.+++ .|... .+.. .+..+.+..+.
T Consensus 55 ~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~----~d~~~~~~~~~~ 128 (223)
T 3duw_A 55 QIQGARNILEIGTL-GGYSTIWLARGLSSGG-RVVTLEASEKHADIARSNIERANLNDRVEVRT----GLALDSLQQIEN 128 (223)
T ss_dssp HHHTCSEEEEECCT-TSHHHHHHHTTCCSSC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE----SCHHHHHHHHHH
T ss_pred HhhCCCEEEEecCC-ccHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE----cCHHHHHHHHHh
Confidence 44577899999886 577788888887 45 99999999987776653 35421 1111 12222222221
Q ss_pred --CCCccEEEEccCC---HHHHHHHHHHhccCCceEEEEcc
Q 017431 254 --DGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 254 --~gg~dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
.+.||+|+-.... +..++.+.+.|+++ |.++.-..
T Consensus 129 ~~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pg-G~lv~~~~ 168 (223)
T 3duw_A 129 EKYEPFDFIFIDADKQNNPAYFEWALKLSRPG-TVIIGDNV 168 (223)
T ss_dssp TTCCCCSEEEECSCGGGHHHHHHHHHHTCCTT-CEEEEESC
T ss_pred cCCCCcCEEEEcCCcHHHHHHHHHHHHhcCCC-cEEEEeCC
Confidence 1369999843322 35688889999997 98776543
|
| >4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=94.88 E-value=0.21 Score=45.55 Aligned_cols=133 Identities=11% Similarity=0.080 Sum_probs=79.3
Q ss_pred EEEEEcCChHHHH-HHHHHHHc-CCCeEEE-EcCChhhH-HHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 189 IVAVFGLGTVGLA-VAEGAKAA-GASRVIG-IDIDPKKF-DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 189 ~VlI~Gag~vG~~-ai~la~~~-g~~~v~~-v~~~~~~~-~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
+|-|+|+|.+|.. .+...+.. ++ ++++ +++++++. ++++++|...++ .++.+.+.+ ..+|+|+-|+
T Consensus 25 rigiIG~G~ig~~~~~~~~~~~~~~-~lvav~d~~~~~a~~~a~~~g~~~~y------~d~~ell~~---~~iDaV~I~t 94 (350)
T 4had_A 25 RFGIISTAKIGRDNVVPAIQDAENC-VVTAIASRDLTRAREMADRFSVPHAF------GSYEEMLAS---DVIDAVYIPL 94 (350)
T ss_dssp EEEEESCCHHHHHTHHHHHHHCSSE-EEEEEECSSHHHHHHHHHHHTCSEEE------SSHHHHHHC---SSCSEEEECS
T ss_pred EEEEEcChHHHHHHHHHHHHhCCCe-EEEEEECCCHHHHHHHHHHcCCCeee------CCHHHHhcC---CCCCEEEEeC
Confidence 7889999999974 45555554 67 5554 56676654 466789987665 334444432 3799999999
Q ss_pred CCHHHHHHHHHHhccCCceEEEEccCCCCCcccccc-hheee--ceEE-EeeecCCCcccCcHHHHHHHHHcCCCC
Q 017431 265 GNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP-FQLVT--GRVW-KGTAFGGFKSRSQVPWLVDKYMKKEIK 336 (371)
Q Consensus 265 g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~~~--~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (371)
......+.+.++|.. |+=|.+..+.....-+... ....+ +..+ .+.. .+....+..+-+++.+|++-
T Consensus 95 P~~~H~~~~~~al~a--GkhVl~EKPla~~~~ea~~l~~~a~~~~~~l~v~~~---~R~~p~~~~~k~~i~~G~iG 165 (350)
T 4had_A 95 PTSQHIEWSIKAADA--GKHVVCEKPLALKAGDIDAVIAARDRNKVVVTEAYM---ITYSPVWQKVRSLIDEGAIG 165 (350)
T ss_dssp CGGGHHHHHHHHHHT--TCEEEECSCCCSSGGGGHHHHHHHHHHTCCEEECCG---GGGSHHHHHHHHHHHTTTTS
T ss_pred CCchhHHHHHHHHhc--CCEEEEeCCcccchhhHHHHHHHHHHcCCceeEeee---eecCHHHHHhhHhhhcCCCC
Confidence 886667888888887 5667776543211111100 01111 2222 2221 22234577778888887753
|
| >3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.87 E-value=0.099 Score=46.45 Aligned_cols=45 Identities=31% Similarity=0.355 Sum_probs=36.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF 230 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~ 230 (371)
.++++||=+|+| .|..++.+++..+..+|++++.++.-.+.+++.
T Consensus 45 ~~~~~VLDiGCG-~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~ 89 (292)
T 3g07_A 45 FRGRDVLDLGCN-VGHLTLSIACKWGPSRMVGLDIDSRLIHSARQN 89 (292)
T ss_dssp TTTSEEEEESCT-TCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHT
T ss_pred cCCCcEEEeCCC-CCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH
Confidence 367899999886 478888899988655999999999877777653
|
| >3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes} | Back alignment and structure |
|---|
Probab=94.87 E-value=0.17 Score=44.08 Aligned_cols=102 Identities=23% Similarity=0.306 Sum_probs=68.2
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCc---EEecCCCCCchHHHHHH
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT---EFVNPKDHDKPIQQVLV 250 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~---~vi~~~~~~~~~~~~~~ 250 (371)
+....++.++.+||-+|+|. |..+..+++..++ +|++++.+++..+.+++ .|.. .++...- .++
T Consensus 53 l~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~--~~~----- 123 (273)
T 3bus_A 53 MIALLDVRSGDRVLDVGCGI-GKPAVRLATARDV-RVTGISISRPQVNQANARATAAGLANRVTFSYADA--MDL----- 123 (273)
T ss_dssp HHHHSCCCTTCEEEEESCTT-SHHHHHHHHHSCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT--TSC-----
T ss_pred HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECcc--ccC-----
Confidence 44566788999999999874 7778888888887 99999999987776654 2321 2221111 000
Q ss_pred hhcCCCccEEEEcc-----CC-HHHHHHHHHHhccCCceEEEEcc
Q 017431 251 DLTDGGVDYSFECI-----GN-VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 251 ~~~~gg~dvvid~~-----g~-~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
...++.||+|+... .. ...++.+.+.|+++ |+++....
T Consensus 124 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~~~ 167 (273)
T 3bus_A 124 PFEDASFDAVWALESLHHMPDRGRALREMARVLRPG-GTVAIADF 167 (273)
T ss_dssp CSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEE-EEEEEEEE
T ss_pred CCCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCC-eEEEEEEe
Confidence 11123799998532 12 35688889999997 99886643
|
| >1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A* | Back alignment and structure |
|---|
Probab=94.86 E-value=0.088 Score=46.97 Aligned_cols=95 Identities=15% Similarity=0.104 Sum_probs=61.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcC--------C-c-EEecCCCCCchHHHHHHhhcCC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG--------V-T-EFVNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g--------~-~-~vi~~~~~~~~~~~~~~~~~~g 255 (371)
++++||++|+| .|..+..+++..+..+|++++.+++..+.+++.- . . .++ . .+..+.+.. ..+
T Consensus 90 ~~~~VLdiG~G-~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~-~----~D~~~~l~~-~~~ 162 (296)
T 1inl_A 90 NPKKVLIIGGG-DGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIV-I----ANGAEYVRK-FKN 162 (296)
T ss_dssp SCCEEEEEECT-TCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE-E----SCHHHHGGG-CSS
T ss_pred CCCEEEEEcCC-cCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEE-E----CcHHHHHhh-CCC
Confidence 45899999875 3556667777666569999999998888776531 1 1 122 1 122222222 234
Q ss_pred CccEEEE-ccCC----------HHHHHHHHHHhccCCceEEEEc
Q 017431 256 GVDYSFE-CIGN----------VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 256 g~dvvid-~~g~----------~~~~~~~~~~l~~~~G~iv~~g 288 (371)
.||+|+. .... ...++.+.+.|+++ |.++...
T Consensus 163 ~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~ 205 (296)
T 1inl_A 163 EFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKED-GVFSAET 205 (296)
T ss_dssp CEEEEEEEC----------CCSHHHHHHHHHHEEEE-EEEEEEC
T ss_pred CceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCC-cEEEEEc
Confidence 7998884 3211 35688999999997 9998763
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=94.85 E-value=0.22 Score=45.54 Aligned_cols=97 Identities=16% Similarity=0.198 Sum_probs=58.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhH--HHHHhc-CCcEE-ec-CCCCCchHHHHHHhhcCCCccEE
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKF--DRAKNF-GVTEF-VN-PKDHDKPIQQVLVDLTDGGVDYS 260 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~--~~~~~~-g~~~v-i~-~~~~~~~~~~~~~~~~~gg~dvv 260 (371)
+.+|||+|+ |.+|...++.+...|+ +|+++++++++. +.+.+. +...+ .| ..+ . +.+.+.. .++|+|
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d--~---~~l~~~~-~~~d~V 77 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNN--V---PLMDTLF-EGAHLA 77 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCSCSHHHHHHHTSTTEEEEESCCTTC--H---HHHHHHH-TTCSEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCCChhhHHHHhhcCCcEEEECCccCC--H---HHHHHHH-hcCCEE
Confidence 467999988 9999999988888898 788888877654 233332 32221 22 222 2 1233322 258999
Q ss_pred EEccCCH-----HHHHHHHHHhccC--CceEEEEccC
Q 017431 261 FECIGNV-----SVMRAALECCHKG--WGTSVIVGVA 290 (371)
Q Consensus 261 id~~g~~-----~~~~~~~~~l~~~--~G~iv~~g~~ 290 (371)
|.+.+.. .....+++.+... -+++|.+++.
T Consensus 78 i~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~ 114 (352)
T 1xgk_A 78 FINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMP 114 (352)
T ss_dssp EECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECC
T ss_pred EEcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCc
Confidence 9776542 1224445544432 1588888764
|
| >2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.84 E-value=0.057 Score=45.12 Aligned_cols=96 Identities=15% Similarity=0.142 Sum_probs=63.4
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC----cEEecCCCCCchHHHHHHhhcCCCccE
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV----TEFVNPKDHDKPIQQVLVDLTDGGVDY 259 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~----~~vi~~~~~~~~~~~~~~~~~~gg~dv 259 (371)
+.++.+||-+|+|. |..+..+++. |..+|++++.++...+.+++... ..++...- .++ ....+.+|+
T Consensus 40 ~~~~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~--~~~-----~~~~~~fD~ 110 (215)
T 2pxx_A 40 LRPEDRILVLGCGN-SALSYELFLG-GFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDV--RKL-----DFPSASFDV 110 (215)
T ss_dssp CCTTCCEEEETCTT-CSHHHHHHHT-TCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCT--TSC-----CSCSSCEEE
T ss_pred cCCCCeEEEECCCC-cHHHHHHHHc-CCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcch--hcC-----CCCCCcccE
Confidence 46788999999875 7777777776 54489999999998888876432 12221111 000 122237999
Q ss_pred EEEccC---------------------CHHHHHHHHHHhccCCceEEEEcc
Q 017431 260 SFECIG---------------------NVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 260 vid~~g---------------------~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
|+.... ....++.+.+.|+++ |+++....
T Consensus 111 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~ 160 (215)
T 2pxx_A 111 VLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPG-GRFISMTS 160 (215)
T ss_dssp EEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEE-EEEEEEES
T ss_pred EEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCC-CEEEEEeC
Confidence 996211 135678888999997 99987754
|
| >1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17 | Back alignment and structure |
|---|
Probab=94.84 E-value=0.078 Score=46.79 Aligned_cols=95 Identities=17% Similarity=0.109 Sum_probs=63.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcC------C--c--EEecCCCCCchHHHHHHhhcCC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG------V--T--EFVNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g------~--~--~vi~~~~~~~~~~~~~~~~~~g 255 (371)
.+++||++|+| .|..+..+++..+..+|++++.+++-.+.+++.- . . .++.. +..+.+.. ..+
T Consensus 75 ~~~~VLdiG~G-~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~-----D~~~~l~~-~~~ 147 (275)
T 1iy9_A 75 NPEHVLVVGGG-DGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVD-----DGFMHIAK-SEN 147 (275)
T ss_dssp SCCEEEEESCT-TCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEES-----CSHHHHHT-CCS
T ss_pred CCCEEEEECCc-hHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEEC-----cHHHHHhh-CCC
Confidence 46899999885 3566667777667669999999998888776531 1 1 12211 12222332 234
Q ss_pred CccEEEEccCC----------HHHHHHHHHHhccCCceEEEEc
Q 017431 256 GVDYSFECIGN----------VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 256 g~dvvid~~g~----------~~~~~~~~~~l~~~~G~iv~~g 288 (371)
.||+|+.-... .+.++.+.+.|+++ |.++...
T Consensus 148 ~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pg-G~lv~~~ 189 (275)
T 1iy9_A 148 QYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKED-GIFVAQT 189 (275)
T ss_dssp CEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEE-EEEEEEC
T ss_pred CeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEEc
Confidence 79998853322 36789999999997 9998763
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=94.83 E-value=0.065 Score=48.64 Aligned_cols=69 Identities=28% Similarity=0.332 Sum_probs=45.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE-ecCCCCCchHHHHHHhhcCCCccEEEE
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFE 262 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~gg~dvvid 262 (371)
.++.+|||+|+ |.+|...++.+...|+ +|+++++++++ .+...+ .|..+ .+ .+.+... ++|+||+
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~------~~~~~~~~Dl~d--~~---~~~~~~~-~~d~vih 83 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGR-TVRGFDLRPSG------TGGEEVVGSLED--GQ---ALSDAIM-GVSAVLH 83 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTC-CEEEEESSCCS------SCCSEEESCTTC--HH---HHHHHHT-TCSEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCC-EEEEEeCCCCC------CCccEEecCcCC--HH---HHHHHHh-CCCEEEE
Confidence 45678999988 9999999999999999 88988887664 233222 23322 22 2222222 6999999
Q ss_pred ccCC
Q 017431 263 CIGN 266 (371)
Q Consensus 263 ~~g~ 266 (371)
+++.
T Consensus 84 ~A~~ 87 (347)
T 4id9_A 84 LGAF 87 (347)
T ss_dssp CCCC
T ss_pred CCcc
Confidence 8764
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=94.82 E-value=0.047 Score=47.62 Aligned_cols=78 Identities=14% Similarity=0.160 Sum_probs=47.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC-hhhHHHHHh----cCCcE-E--ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID-PKKFDRAKN----FGVTE-F--VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~-~~~~~~~~~----~g~~~-v--i~~~~~~~~~~~~~~~~~~-- 254 (371)
.++++||+|+ |++|.+.++.+...|+ +|+++.++ ++..+.+++ .+... . .|..+ .....+.+.+...
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~ 83 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKGY-SVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTK-KEDLHKIVEEAMSHF 83 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHh
Confidence 3578999988 9999999988888999 78877554 443443332 22222 1 23332 1222333333222
Q ss_pred CCccEEEEccC
Q 017431 255 GGVDYSFECIG 265 (371)
Q Consensus 255 gg~dvvid~~g 265 (371)
+++|++++++|
T Consensus 84 g~id~lv~~Ag 94 (264)
T 3i4f_A 84 GKIDFLINNAG 94 (264)
T ss_dssp SCCCEEECCCC
T ss_pred CCCCEEEECCc
Confidence 37999999998
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=94.82 E-value=0.079 Score=47.11 Aligned_cols=92 Identities=15% Similarity=0.194 Sum_probs=55.8
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-------hhHHHHH---hcCCcEE-ecCCCCCchHHHHHHhhcC
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-------KKFDRAK---NFGVTEF-VNPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~-------~~~~~~~---~~g~~~v-i~~~~~~~~~~~~~~~~~~ 254 (371)
+.+|||+|+ |.+|...++.+...|+ +|+++++++ ++.+.++ ..++..+ .|..+ . +.+.+...
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d--~---~~l~~~~~ 75 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGN-PTYALVRKTITAANPETKEELIDNYQSLGVILLEGDIND--H---ETLVKAIK 75 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTC-CEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTC--H---HHHHHHHT
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCC-cEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCC--H---HHHHHHHh
Confidence 457999988 9999999988888898 788888876 4443332 3454332 23332 2 22333222
Q ss_pred CCccEEEEccCCH--HHHHHHHHHhccC--CceEE
Q 017431 255 GGVDYSFECIGNV--SVMRAALECCHKG--WGTSV 285 (371)
Q Consensus 255 gg~dvvid~~g~~--~~~~~~~~~l~~~--~G~iv 285 (371)
++|+||++++.. .....+++.+... -.++|
T Consensus 76 -~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v 109 (307)
T 2gas_A 76 -QVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF 109 (307)
T ss_dssp -TCSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred -CCCEEEECCcccccccHHHHHHHHHhcCCceEEe
Confidence 699999998752 1233444444432 14666
|
| >3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=94.80 E-value=0.052 Score=47.54 Aligned_cols=100 Identities=18% Similarity=0.171 Sum_probs=63.9
Q ss_pred hhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE--EecCCCCCchHHHHHHhhcCCC
Q 017431 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--FVNPKDHDKPIQQVLVDLTDGG 256 (371)
Q Consensus 179 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~--vi~~~~~~~~~~~~~~~~~~gg 256 (371)
....++.++.+||=+|+| .|..++.+++. |+ +|++++.+++-.+.+++.-... ..+..+.+.. ......+.
T Consensus 38 l~~l~l~~g~~VLDlGcG-tG~~a~~La~~-g~-~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~----~~~~~~~~ 110 (261)
T 3iv6_A 38 IFLENIVPGSTVAVIGAS-TRFLIEKALER-GA-SVTVFDFSQRMCDDLAEALADRCVTIDLLDITAE----IPKELAGH 110 (261)
T ss_dssp HHTTTCCTTCEEEEECTT-CHHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSC----CCGGGTTC
T ss_pred HHhcCCCCcCEEEEEeCc-chHHHHHHHhc-CC-EEEEEECCHHHHHHHHHHHHhccceeeeeecccc----cccccCCC
Confidence 455678899999999986 57777788775 77 9999999999888887643221 1111110000 00111247
Q ss_pred ccEEEEccC-----C---HHHHHHHHHHhccCCceEEEE
Q 017431 257 VDYSFECIG-----N---VSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 257 ~dvvid~~g-----~---~~~~~~~~~~l~~~~G~iv~~ 287 (371)
||+|+.... . ...+..+.+.+ ++ |+++..
T Consensus 111 fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PG-G~l~lS 147 (261)
T 3iv6_A 111 FDFVLNDRLINRFTTEEARRACLGMLSLV-GS-GTVRAS 147 (261)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHHH-TT-SEEEEE
T ss_pred ccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cC-cEEEEE
Confidence 999986432 1 23577777888 96 998754
|
| >2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A* | Back alignment and structure |
|---|
Probab=94.80 E-value=0.087 Score=47.24 Aligned_cols=96 Identities=16% Similarity=0.127 Sum_probs=62.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcC---------Cc-EEecCCCCCchHHHHHHhhcC
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG---------VT-EFVNPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g---------~~-~vi~~~~~~~~~~~~~~~~~~ 254 (371)
.++++||++|+| .|..+..+++..+..+|++++.+++-.+.+++.- .. .++ . .+..+.+.. ..
T Consensus 94 ~~~~~VLdiG~G-~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~-~----~Da~~~l~~-~~ 166 (304)
T 2o07_A 94 PNPRKVLIIGGG-DGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLH-V----GDGFEFMKQ-NQ 166 (304)
T ss_dssp SSCCEEEEEECT-TSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE-E----SCHHHHHHT-CS
T ss_pred CCCCEEEEECCC-chHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEE-E----CcHHHHHhh-CC
Confidence 456899999875 3666677777655559999999998888776531 11 122 1 222222332 23
Q ss_pred CCccEEEEccCC----------HHHHHHHHHHhccCCceEEEEc
Q 017431 255 GGVDYSFECIGN----------VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 255 gg~dvvid~~g~----------~~~~~~~~~~l~~~~G~iv~~g 288 (371)
+.||+|+.-... ...++.+.+.|+++ |.++...
T Consensus 167 ~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~ 209 (304)
T 2o07_A 167 DAFDVIITDSSDPMGPAESLFKESYYQLMKTALKED-GVLCCQG 209 (304)
T ss_dssp SCEEEEEEECC-----------CHHHHHHHHHEEEE-EEEEEEE
T ss_pred CCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCC-eEEEEec
Confidence 479998843222 24688999999997 9988654
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=94.79 E-value=0.064 Score=48.93 Aligned_cols=74 Identities=19% Similarity=0.178 Sum_probs=47.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhc----CCcEE-ecCCCCCchHHHHHHhhcCC-Ccc
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNF----GVTEF-VNPKDHDKPIQQVLVDLTDG-GVD 258 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~----g~~~v-i~~~~~~~~~~~~~~~~~~g-g~d 258 (371)
+.+|||+|+ |.+|...++.+...|+ +|++++++.++.+ +...+ +...+ .|..+ .. .+.+...+ ++|
T Consensus 9 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~---~~~~~~~~~~~d 82 (357)
T 1rkx_A 9 GKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPTVPSLFETARVADGMQSEIGDIRD--QN---KLLESIREFQPE 82 (357)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTC--HH---HHHHHHHHHCCS
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-eEEEEeCCCcccchhhHhhccCCceEEEEccccC--HH---HHHHHHHhcCCC
Confidence 578999988 9999999998888999 8999888765432 22221 22111 22222 21 22222223 689
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
+||++++.
T Consensus 83 ~vih~A~~ 90 (357)
T 1rkx_A 83 IVFHMAAQ 90 (357)
T ss_dssp EEEECCSC
T ss_pred EEEECCCC
Confidence 99999883
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=94.78 E-value=0.089 Score=46.21 Aligned_cols=78 Identities=9% Similarity=0.237 Sum_probs=48.6
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChh---hHHHH-HhcCCcEE--ecCCCCCchHHHHHHhhc--C
Q 017431 186 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPK---KFDRA-KNFGVTEF--VNPKDHDKPIQQVLVDLT--D 254 (371)
Q Consensus 186 ~g~~VlI~Ga---g~vG~~ai~la~~~g~~~v~~v~~~~~---~~~~~-~~~g~~~v--i~~~~~~~~~~~~~~~~~--~ 254 (371)
.++++||+|+ |++|.+.++.+...|+ +|++++++++ ..+.+ .+.+.... .|..+ .....+.+.+.. .
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~ 82 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSK-EEHFKSLYNSVKKDL 82 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTC-HHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4689999976 6999999988888899 8999888765 22222 23342222 23333 122222222221 2
Q ss_pred CCccEEEEccC
Q 017431 255 GGVDYSFECIG 265 (371)
Q Consensus 255 gg~dvvid~~g 265 (371)
+++|+++++.|
T Consensus 83 g~id~lv~nAg 93 (275)
T 2pd4_A 83 GSLDFIVHSVA 93 (275)
T ss_dssp SCEEEEEECCC
T ss_pred CCCCEEEECCc
Confidence 37999999887
|
| >2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=94.75 E-value=0.085 Score=47.95 Aligned_cols=46 Identities=22% Similarity=0.313 Sum_probs=38.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 232 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~ 232 (371)
-.|++|.|+|.|.+|...++.++..|+ +|++.+++.++ +.+.++|.
T Consensus 144 l~g~~vgIIG~G~iG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~ 189 (333)
T 2d0i_A 144 LYGKKVGILGMGAIGKAIARRLIPFGV-KLYYWSRHRKV-NVEKELKA 189 (333)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCH-HHHHHHTE
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCCcch-hhhhhcCc
Confidence 467899999999999999999999999 89999988776 44445553
|
| >1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A* | Back alignment and structure |
|---|
Probab=94.73 E-value=0.073 Score=48.67 Aligned_cols=90 Identities=26% Similarity=0.259 Sum_probs=57.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
-.|++|.|+|.|.+|...++.++.+|+ +|++.++..++. ..+++|+.. . .++.+.+. ..|+|+-++
T Consensus 166 l~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~-~~~~~g~~~-~------~~l~ell~-----~aDvV~l~~ 231 (347)
T 1mx3_A 166 IRGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLSDG-VERALGLQR-V------STLQDLLF-----HSDCVTLHC 231 (347)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCTT-HHHHHTCEE-C------SSHHHHHH-----HCSEEEECC
T ss_pred CCCCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcchh-hHhhcCCee-c------CCHHHHHh-----cCCEEEEcC
Confidence 368899999999999999999999999 899998765542 334556521 1 11222222 267777665
Q ss_pred CCH----HHH-HHHHHHhccCCceEEEEcc
Q 017431 265 GNV----SVM-RAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 265 g~~----~~~-~~~~~~l~~~~G~iv~~g~ 289 (371)
... ..+ ...+..|+++ ..+|.++.
T Consensus 232 P~t~~t~~li~~~~l~~mk~g-ailIN~ar 260 (347)
T 1mx3_A 232 GLNEHNHHLINDFTVKQMRQG-AFLVNTAR 260 (347)
T ss_dssp CCCTTCTTSBSHHHHTTSCTT-EEEEECSC
T ss_pred CCCHHHHHHhHHHHHhcCCCC-CEEEECCC
Confidence 431 112 4455666664 66666654
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=94.70 E-value=0.074 Score=49.37 Aligned_cols=80 Identities=21% Similarity=0.201 Sum_probs=48.8
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHH-cCCCeEEEEcCChhh----------------HHHHHhcCCcEE-e--cCCCCCc
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKA-AGASRVIGIDIDPKK----------------FDRAKNFGVTEF-V--NPKDHDK 243 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~-~g~~~v~~v~~~~~~----------------~~~~~~~g~~~v-i--~~~~~~~ 243 (371)
..++++||+|+ +++|.+.+..+.. .|+ +|++++++.+. .+.+++.|.... + |..+ ..
T Consensus 45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA-~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd-~~ 122 (405)
T 3zu3_A 45 NGPKRVLVIGASTGYGLAARITAAFGCGA-DTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFS-DE 122 (405)
T ss_dssp TCCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTS-HH
T ss_pred CCCCEEEEeCcchHHHHHHHHHHHHhcCC-EEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCC-HH
Confidence 56788899988 8999987776666 899 88887665432 123455565332 2 2222 12
Q ss_pred hHHHHHHhhc--CCCccEEEEccCC
Q 017431 244 PIQQVLVDLT--DGGVDYSFECIGN 266 (371)
Q Consensus 244 ~~~~~~~~~~--~gg~dvvid~~g~ 266 (371)
.....+.+.. -|++|++++++|.
T Consensus 123 ~v~~~v~~i~~~~G~IDiLVNNAG~ 147 (405)
T 3zu3_A 123 IKQLTIDAIKQDLGQVDQVIYSLAS 147 (405)
T ss_dssp HHHHHHHHHHHHTSCEEEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEEcCcc
Confidence 2222222221 2479999998875
|
| >2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A* | Back alignment and structure |
|---|
Probab=94.70 E-value=0.07 Score=46.43 Aligned_cols=96 Identities=15% Similarity=0.014 Sum_probs=60.6
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCC---------------------cEEecCCCC
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGV---------------------TEFVNPKDH 241 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~-~g~---------------------~~vi~~~~~ 241 (371)
..++.+||.+|+| .|..+..+++. |+ +|++++.++.-.+.+++ .+. ..-+...+
T Consensus 66 ~~~~~~vLD~GCG-~G~~~~~La~~-G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D- 141 (252)
T 2gb4_A 66 GQSGLRVFFPLCG-KAIEMKWFADR-GH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCS- 141 (252)
T ss_dssp TCCSCEEEETTCT-TCTHHHHHHHT-TC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESC-
T ss_pred CCCCCeEEEeCCC-CcHHHHHHHHC-CC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECc-
Confidence 4578899999886 46667777765 88 99999999998887754 321 11111111
Q ss_pred CchHHHHHHhhcCCCccEEEEccC-----C---HHHHHHHHHHhccCCceEEEEc
Q 017431 242 DKPIQQVLVDLTDGGVDYSFECIG-----N---VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 242 ~~~~~~~~~~~~~gg~dvvid~~g-----~---~~~~~~~~~~l~~~~G~iv~~g 288 (371)
+.+ +.....+.||+|++... . ...++.+.+.|+++ |+++.+.
T Consensus 142 ---~~~-l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpG-G~l~l~~ 191 (252)
T 2gb4_A 142 ---IFD-LPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKE-FQYLVAV 191 (252)
T ss_dssp ---TTT-GGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred ---ccc-CCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCC-eEEEEEE
Confidence 100 11111147999997422 1 23577888999997 9986543
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=94.70 E-value=0.043 Score=48.42 Aligned_cols=93 Identities=18% Similarity=0.268 Sum_probs=58.8
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE-ecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
+.+|||+|+|.+|...+..+...|. +|+++++++++. .-+...+ .|..+ .+ .+.+...+.+|+||++++
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~~~~----~~~~~~~~~Dl~d--~~---~~~~~~~~~~d~vih~a~ 72 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGH-EVTGLRRSAQPM----PAGVQTLIADVTR--PD---TLASIVHLRPEILVYCVA 72 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC-CEEEEECTTSCC----CTTCCEEECCTTC--GG---GCTTGGGGCCSEEEECHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcccc----ccCCceEEccCCC--hH---HHHHhhcCCCCEEEEeCC
Confidence 4689999999999999999999999 899998877652 1223222 23322 11 122222235999999886
Q ss_pred CH------------HHHHHHHHHhccC-CceEEEEcc
Q 017431 266 NV------------SVMRAALECCHKG-WGTSVIVGV 289 (371)
Q Consensus 266 ~~------------~~~~~~~~~l~~~-~G~iv~~g~ 289 (371)
.. .....+++.+... -+++|.+++
T Consensus 73 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS 109 (286)
T 3gpi_A 73 ASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSS 109 (286)
T ss_dssp HHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Confidence 42 1245555666542 147887765
|
| >4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A* | Back alignment and structure |
|---|
Probab=94.70 E-value=0.13 Score=44.96 Aligned_cols=94 Identities=18% Similarity=0.332 Sum_probs=62.8
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHc---CCCeEEEEcCChhhHHHHHh----cCCc---EEecCCCCCchHHHHHHhhc
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAA---GASRVIGIDIDPKKFDRAKN----FGVT---EFVNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~---g~~~v~~v~~~~~~~~~~~~----~g~~---~vi~~~~~~~~~~~~~~~~~ 253 (371)
+++|.+||=+|+| .|..+..+++.. |+ +|++++.+++-.+.+++ .+.. .++. .+ +.++.
T Consensus 68 ~~~~~~vLDlGcG-tG~~~~~la~~~~~~~~-~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~-~D--------~~~~~ 136 (261)
T 4gek_A 68 VQPGTQVYDLGCS-LGAATLSVRRNIHHDNC-KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIE-GD--------IRDIA 136 (261)
T ss_dssp CCTTCEEEEETCT-TTHHHHHHHHTCCSSSC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE-SC--------TTTCC
T ss_pred CCCCCEEEEEeCC-CCHHHHHHHHhcCCCCC-EEEEEECCHHHHHHHHHHHHhhccCceEEEee-cc--------ccccc
Confidence 7899999999886 466777778764 56 89999999987776654 3332 1221 11 11222
Q ss_pred CCCccEEEEccCC--------HHHHHHHHHHhccCCceEEEEcc
Q 017431 254 DGGVDYSFECIGN--------VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 254 ~gg~dvvid~~g~--------~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
.+.+|+|+....- ..+++.+.+.|++| |+++....
T Consensus 137 ~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpG-G~lii~e~ 179 (261)
T 4gek_A 137 IENASMVVLNFTLQFLEPSERQALLDKIYQGLNPG-GALVLSEK 179 (261)
T ss_dssp CCSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred ccccccceeeeeeeecCchhHhHHHHHHHHHcCCC-cEEEEEec
Confidence 2368888753321 23588899999997 99987644
|
| >4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=94.65 E-value=0.14 Score=46.73 Aligned_cols=89 Identities=15% Similarity=0.221 Sum_probs=59.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
-.|++|.|+|.|.+|...++.++.+|+ +|++.+++..+.+... |... . .++.+.+. ..|+|+-++
T Consensus 171 l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~--g~~~-~------~~l~ell~-----~sDvV~l~~ 235 (345)
T 4g2n_A 171 LTGRRLGIFGMGRIGRAIATRARGFGL-AIHYHNRTRLSHALEE--GAIY-H------DTLDSLLG-----ASDIFLIAA 235 (345)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHT--TCEE-C------SSHHHHHH-----TCSEEEECS
T ss_pred cCCCEEEEEEeChhHHHHHHHHHHCCC-EEEEECCCCcchhhhc--CCeE-e------CCHHHHHh-----hCCEEEEec
Confidence 457899999999999999999999999 9999988765443322 4321 1 12333332 378888776
Q ss_pred CC-HHH---H-HHHHHHhccCCceEEEEcc
Q 017431 265 GN-VSV---M-RAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 265 g~-~~~---~-~~~~~~l~~~~G~iv~~g~ 289 (371)
.. +++ + ...+..|+++ ..+|.++.
T Consensus 236 Plt~~T~~li~~~~l~~mk~g-ailIN~aR 264 (345)
T 4g2n_A 236 PGRPELKGFLDHDRIAKIPEG-AVVINISR 264 (345)
T ss_dssp CCCGGGTTCBCHHHHHHSCTT-EEEEECSC
T ss_pred CCCHHHHHHhCHHHHhhCCCC-cEEEECCC
Confidence 63 221 2 4566777885 77776653
|
| >3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=94.63 E-value=0.23 Score=45.22 Aligned_cols=91 Identities=15% Similarity=0.132 Sum_probs=63.3
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCH
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 267 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~ 267 (371)
.+|.|+|.|.+|.+.+..++..|. .|++.++++++.+.+.++|+... .+..+.+.+. ..+.|+||-|+...
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~-~V~~~dr~~~~~~~a~~~G~~~~-------~~~~e~~~~a-~~~aDlVilavP~~ 79 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANH-SVFGYNRSRSGAKSAVDEGFDVS-------ADLEATLQRA-AAEDALIVLAVPMT 79 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHTTCCEE-------SCHHHHHHHH-HHTTCEEEECSCHH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeee-------CCHHHHHHhc-ccCCCEEEEeCCHH
Confidence 579999999999999999999998 89999999999998888987421 1233333321 01479999999863
Q ss_pred HHHHHHHHH---hccCCceEEEEcc
Q 017431 268 SVMRAALEC---CHKGWGTSVIVGV 289 (371)
Q Consensus 268 ~~~~~~~~~---l~~~~G~iv~~g~ 289 (371)
.+...++. +.++ ..++.+++
T Consensus 80 -~~~~vl~~l~~~~~~-~iv~Dv~S 102 (341)
T 3ktd_A 80 -AIDSLLDAVHTHAPN-NGFTDVVS 102 (341)
T ss_dssp -HHHHHHHHHHHHCTT-CCEEECCS
T ss_pred -HHHHHHHHHHccCCC-CEEEEcCC
Confidence 34443333 3453 55666654
|
| >1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A* | Back alignment and structure |
|---|
Probab=94.62 E-value=0.13 Score=46.79 Aligned_cols=88 Identities=17% Similarity=0.146 Sum_probs=61.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
-.|++|.|+|.|.+|...++.++.+|+ +|++.+++.++. ++++ +. .. .+..+.+. ..|+|+.++
T Consensus 144 l~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~--~~~~-~~----~~---~~l~ell~-----~aDvV~l~~ 207 (333)
T 1j4a_A 144 VRDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPE--LEKK-GY----YV---DSLDDLYK-----QADVISLHV 207 (333)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHH--HHHT-TC----BC---SCHHHHHH-----HCSEEEECS
T ss_pred CCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCCcchh--HHhh-Ce----ec---CCHHHHHh-----hCCEEEEcC
Confidence 357899999999999999999999999 899998877654 2332 21 11 12333332 389999887
Q ss_pred CCHH----HH-HHHHHHhccCCceEEEEcc
Q 017431 265 GNVS----VM-RAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 265 g~~~----~~-~~~~~~l~~~~G~iv~~g~ 289 (371)
.... .+ ...+..|+++ +.+|.++.
T Consensus 208 p~~~~t~~li~~~~l~~mk~g-a~lIn~ar 236 (333)
T 1j4a_A 208 PDVPANVHMINDESIAKMKQD-VVIVNVSR 236 (333)
T ss_dssp CCCGGGTTCBSHHHHHHSCTT-EEEEECSC
T ss_pred CCcHHHHHHHhHHHHhhCCCC-cEEEECCC
Confidence 7422 12 4567788886 88887765
|
| >2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A* | Back alignment and structure |
|---|
Probab=94.61 E-value=0.054 Score=48.05 Aligned_cols=97 Identities=15% Similarity=0.070 Sum_probs=63.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC--------cE-EecCCCCCchHHHHHHhhcCC
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV--------TE-FVNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~--------~~-vi~~~~~~~~~~~~~~~~~~g 255 (371)
.++++||++|+| .|..+..+++..+..+|++++.+++-.+.+++.-. .. -+.. .+..+.+... .+
T Consensus 77 ~~~~~VLdiG~G-~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~----~D~~~~l~~~-~~ 150 (283)
T 2i7c_A 77 KEPKNVLVVGGG-DGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFI----EDASKFLENV-TN 150 (283)
T ss_dssp SSCCEEEEEECT-TSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEE----SCHHHHHHHC-CS
T ss_pred CCCCeEEEEeCC-cCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEE----CChHHHHHhC-CC
Confidence 456899999875 35556666766555599999999998888875321 11 1111 2233333332 34
Q ss_pred CccEEEEccCC----------HHHHHHHHHHhccCCceEEEEc
Q 017431 256 GVDYSFECIGN----------VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 256 g~dvvid~~g~----------~~~~~~~~~~l~~~~G~iv~~g 288 (371)
.||+|+.-... ...++.+.+.|+++ |.++...
T Consensus 151 ~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pg-G~lv~~~ 192 (283)
T 2i7c_A 151 TYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPN-GYCVAQC 192 (283)
T ss_dssp CEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEE-EEEEEEC
T ss_pred CceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEEC
Confidence 89998852211 36688999999997 9998764
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=94.58 E-value=0.14 Score=45.68 Aligned_cols=68 Identities=21% Similarity=0.281 Sum_probs=37.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
+.+|||+|+ |.+|...++.+...|+ +|++++++.++. + ....|..+ ...+.+.+... ++|+||++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~------~-~~~~Dl~d-~~~~~~~~~~~---~~d~vih~A~ 69 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNW-HAVGCGFRRARP------K-FEQVNLLD-SNAVHHIIHDF---QPHVIVHCAA 69 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEC--------------------------CHHHHHHH---CCSEEEECC-
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCC-eEEEEccCCCCC------C-eEEecCCC-HHHHHHHHHhh---CCCEEEECCc
Confidence 468999988 9999999998888898 899988765431 1 11112222 12222333222 5899999887
Q ss_pred C
Q 017431 266 N 266 (371)
Q Consensus 266 ~ 266 (371)
.
T Consensus 70 ~ 70 (315)
T 2ydy_A 70 E 70 (315)
T ss_dssp -
T ss_pred c
Confidence 4
|
| >2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A* | Back alignment and structure |
|---|
Probab=94.57 E-value=0.21 Score=44.28 Aligned_cols=74 Identities=19% Similarity=0.182 Sum_probs=53.2
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHH
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 268 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~ 268 (371)
+|.|+|+|.+|.+.+..+...|. +|++.++++++.+.+.+.|+. + . .+..+.+. ..|+|+-|+..+.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~-~--~----~~~~~~~~-----~~Dvvi~~vp~~~ 68 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGY-PLIIYDVFPDACKEFQDAGEQ-V--V----SSPADVAE-----KADRIITMLPTSI 68 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTC-CEEEECSSTHHHHHHHTTTCE-E--C----SSHHHHHH-----HCSEEEECCSSHH
T ss_pred eEEEEeccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCe-e--c----CCHHHHHh-----cCCEEEEeCCCHH
Confidence 47889999999998888888898 799999998888877776652 1 1 12223232 3789999887655
Q ss_pred HHHHHHH
Q 017431 269 VMRAALE 275 (371)
Q Consensus 269 ~~~~~~~ 275 (371)
..+..+.
T Consensus 69 ~~~~v~~ 75 (296)
T 2gf2_A 69 NAIEAYS 75 (296)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 5666554
|
| >2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18 | Back alignment and structure |
|---|
Probab=94.57 E-value=0.18 Score=44.63 Aligned_cols=97 Identities=15% Similarity=0.144 Sum_probs=66.0
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCc---EEecCCCCCchHHHHHHhhcCC
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT---EFVNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~---~vi~~~~~~~~~~~~~~~~~~g 255 (371)
.+.++.+||-+|+| .|..+..+++..|+ +|++++.++...+.+++ .|.. .++...- .+. ...++
T Consensus 79 ~~~~~~~vLDiGcG-~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~--~~~-----~~~~~ 149 (297)
T 2o57_A 79 VLQRQAKGLDLGAG-YGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSF--LEI-----PCEDN 149 (297)
T ss_dssp CCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCT--TSC-----SSCTT
T ss_pred CCCCCCEEEEeCCC-CCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCc--ccC-----CCCCC
Confidence 67889999999987 57777888888788 99999999987766654 2321 2221111 000 11123
Q ss_pred CccEEEEccCC------HHHHHHHHHHhccCCceEEEEcc
Q 017431 256 GVDYSFECIGN------VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 256 g~dvvid~~g~------~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
.||+|+....- ...+..+.+.|+++ |+++....
T Consensus 150 ~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~ 188 (297)
T 2o57_A 150 SYDFIWSQDAFLHSPDKLKVFQECARVLKPR-GVMAITDP 188 (297)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred CEeEEEecchhhhcCCHHHHHHHHHHHcCCC-eEEEEEEe
Confidence 79999964321 35689999999997 99887743
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=94.56 E-value=0.035 Score=48.17 Aligned_cols=81 Identities=21% Similarity=0.214 Sum_probs=47.2
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhhH----HHHHhcCCcE-E--ecCCCCCchHHHHHHhhc-
Q 017431 184 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKF----DRAKNFGVTE-F--VNPKDHDKPIQQVLVDLT- 253 (371)
Q Consensus 184 ~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~-~~~~~~----~~~~~~g~~~-v--i~~~~~~~~~~~~~~~~~- 253 (371)
..++++|||+|+ |++|.+.+..+...|+ +|++++ ++.++. +.+++.+... . .|..+ .....+.+.+..
T Consensus 10 ~~~~k~vlITGas~giG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~ 87 (256)
T 3ezl_A 10 VMSQRIAYVTGGMGGIGTSICQRLHKDGF-RVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGD-WDSTKQAFDKVKA 87 (256)
T ss_dssp ---CEEEEETTTTSHHHHHHHHHHHHTTE-EEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTC-HHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCC-HHHHHHHHHHHHH
Confidence 356789999988 9999998888888999 777765 443332 2223344332 2 22222 122222232221
Q ss_pred -CCCccEEEEccCC
Q 017431 254 -DGGVDYSFECIGN 266 (371)
Q Consensus 254 -~gg~dvvid~~g~ 266 (371)
-+++|++++++|.
T Consensus 88 ~~g~id~lv~~Ag~ 101 (256)
T 3ezl_A 88 EVGEIDVLVNNAGI 101 (256)
T ss_dssp HTCCEEEEEECCCC
T ss_pred hcCCCCEEEECCCC
Confidence 1379999998874
|
| >1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41 | Back alignment and structure |
|---|
Probab=94.55 E-value=0.085 Score=45.78 Aligned_cols=100 Identities=21% Similarity=0.247 Sum_probs=65.6
Q ss_pred hhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc----CCc--EEecCCCCCchHHHHHHhh
Q 017431 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVT--EFVNPKDHDKPIQQVLVDL 252 (371)
Q Consensus 179 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~----g~~--~vi~~~~~~~~~~~~~~~~ 252 (371)
.......++.+||-+|+| .|..+..+++. +. +|++++.+++..+.+++. +.. .++...- .++ ..
T Consensus 30 ~~~l~~~~~~~vLDiGcG-~G~~~~~l~~~-~~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~--~~l-----~~ 99 (260)
T 1vl5_A 30 MQIAALKGNEEVLDVATG-GGHVANAFAPF-VK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA--EQM-----PF 99 (260)
T ss_dssp HHHHTCCSCCEEEEETCT-TCHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC---CC-----CS
T ss_pred HHHhCCCCCCEEEEEeCC-CCHHHHHHHHh-CC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecH--HhC-----CC
Confidence 344556788999999987 56677777765 44 999999999877776542 322 1221111 000 11
Q ss_pred cCCCccEEEEccCC------HHHHHHHHHHhccCCceEEEEcc
Q 017431 253 TDGGVDYSFECIGN------VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 253 ~~gg~dvvid~~g~------~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
.++.||+|+....- ...+..+.+.|+++ |+++....
T Consensus 100 ~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~l~~~~~ 141 (260)
T 1vl5_A 100 TDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKG-GQLLLVDN 141 (260)
T ss_dssp CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred CCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCC-CEEEEEEc
Confidence 12379999975332 35689999999997 99987643
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=94.54 E-value=0.14 Score=46.40 Aligned_cols=88 Identities=17% Similarity=0.144 Sum_probs=54.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh----hhHHHHH---hcCCcEE-ecCCCCCchHHHHHHhhcCCCc
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP----KKFDRAK---NFGVTEF-VNPKDHDKPIQQVLVDLTDGGV 257 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~----~~~~~~~---~~g~~~v-i~~~~~~~~~~~~~~~~~~gg~ 257 (371)
..+|||+|+ |.+|...+..+...|. +|+++++++ ++.+.+. ..++..+ .|..+ ...+.+.+.+ .++
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d-~~~l~~~~~~---~~~ 84 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHR-PTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINE-QEAMEKILKE---HEI 84 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTC-CEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTC-HHHHHHHHHH---TTC
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCC-CEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCC-HHHHHHHHhh---CCC
Confidence 358999998 9999999999988998 888888866 4444332 3455332 23332 1223333322 179
Q ss_pred cEEEEccCCHH--HHHHHHHHhcc
Q 017431 258 DYSFECIGNVS--VMRAALECCHK 279 (371)
Q Consensus 258 dvvid~~g~~~--~~~~~~~~l~~ 279 (371)
|+||++++... ....+++.+..
T Consensus 85 d~Vi~~a~~~n~~~~~~l~~aa~~ 108 (346)
T 3i6i_A 85 DIVVSTVGGESILDQIALVKAMKA 108 (346)
T ss_dssp CEEEECCCGGGGGGHHHHHHHHHH
T ss_pred CEEEECCchhhHHHHHHHHHHHHH
Confidence 99999988622 23444455444
|
| >2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=94.53 E-value=0.076 Score=45.91 Aligned_cols=100 Identities=15% Similarity=0.112 Sum_probs=66.8
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhcCC-cEEecCCCCCchHHHHHHhhcCC
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGV-TEFVNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~-g~~~v~~v~~~~~~~~~~~~~g~-~~vi~~~~~~~~~~~~~~~~~~g 255 (371)
+.......++.+||-+|+| .|..+..+++.. +. +|++++.+++..+.+++... ..++...- .++ ...+
T Consensus 25 l~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~d~--~~~------~~~~ 94 (259)
T 2p35_A 25 LLAQVPLERVLNGYDLGCG-PGNSTELLTDRYGVN-VITGIDSDDDMLEKAADRLPNTNFGKADL--ATW------KPAQ 94 (259)
T ss_dssp HHTTCCCSCCSSEEEETCT-TTHHHHHHHHHHCTT-SEEEEESCHHHHHHHHHHSTTSEEEECCT--TTC------CCSS
T ss_pred HHHhcCCCCCCEEEEecCc-CCHHHHHHHHhCCCC-EEEEEECCHHHHHHHHHhCCCcEEEECCh--hhc------CccC
Confidence 3455567788999999886 567777777776 55 89999999998888876422 12222111 111 0123
Q ss_pred CccEEEEccC-----C-HHHHHHHHHHhccCCceEEEEc
Q 017431 256 GVDYSFECIG-----N-VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 256 g~dvvid~~g-----~-~~~~~~~~~~l~~~~G~iv~~g 288 (371)
.||+|+.... . ...+..+.+.|+++ |+++...
T Consensus 95 ~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~~~~ 132 (259)
T 2p35_A 95 KADLLYANAVFQWVPDHLAVLSQLMDQLESG-GVLAVQM 132 (259)
T ss_dssp CEEEEEEESCGGGSTTHHHHHHHHGGGEEEE-EEEEEEE
T ss_pred CcCEEEEeCchhhCCCHHHHHHHHHHhcCCC-eEEEEEe
Confidence 7999997442 2 34578888999997 9988763
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=94.52 E-value=0.15 Score=45.13 Aligned_cols=73 Identities=22% Similarity=0.263 Sum_probs=48.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCChhhH--HHHHhcCCcEE-ecCCCCCchHHHHHHhhcCCCccEEE
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAG-ASRVIGIDIDPKKF--DRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSF 261 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g-~~~v~~v~~~~~~~--~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~gg~dvvi 261 (371)
.++|||+|+ |.+|...++.+...| + +|+++++++++. +.+...++..+ .|..+ . +.+.+... ++|++|
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~-~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d--~---~~l~~~~~-~~d~vi 77 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTF-KVRVVTRNPRKKAAKELRLQGAEVVQGDQDD--Q---VIMELALN-GAYATF 77 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSS-EEEEEESCTTSHHHHHHHHTTCEEEECCTTC--H---HHHHHHHT-TCSEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCc-eEEEEEcCCCCHHHHHHHHCCCEEEEecCCC--H---HHHHHHHh-cCCEEE
Confidence 468999998 999999998888778 7 899988887653 23334455332 23322 1 22333222 599999
Q ss_pred EccCC
Q 017431 262 ECIGN 266 (371)
Q Consensus 262 d~~g~ 266 (371)
++++.
T Consensus 78 ~~a~~ 82 (299)
T 2wm3_A 78 IVTNY 82 (299)
T ss_dssp ECCCH
T ss_pred EeCCC
Confidence 98874
|
| >3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=94.51 E-value=0.27 Score=44.06 Aligned_cols=69 Identities=23% Similarity=0.314 Sum_probs=49.4
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC--hhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID--PKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~--~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
.+|.|+|+|.+|...++.+...|...|++.+++ +++.+.+.+.|+.. . .+..+.+. ..|+||-|+.
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~-~------~~~~e~~~-----~aDvVi~~vp 92 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSC-K------ASVAEVAG-----ECDVIFSLVT 92 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEE-C------SCHHHHHH-----HCSEEEECSC
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEE-e------CCHHHHHh-----cCCEEEEecC
Confidence 579999999999998888888887689999886 57777777777632 1 12222222 3788888877
Q ss_pred CHH
Q 017431 266 NVS 268 (371)
Q Consensus 266 ~~~ 268 (371)
...
T Consensus 93 ~~~ 95 (312)
T 3qsg_A 93 AQA 95 (312)
T ss_dssp TTT
T ss_pred chh
Confidence 644
|
| >3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A* | Back alignment and structure |
|---|
Probab=94.51 E-value=0.25 Score=45.13 Aligned_cols=134 Identities=13% Similarity=0.095 Sum_probs=78.2
Q ss_pred CEEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhhHH-HHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAA--GASRVIGIDIDPKKFD-RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~--g~~~v~~v~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
-+|.|+|+|.+|...+...+.. +++.+.+.++++++.+ +++++|+ ..+ .++.+.+.+ ..+|+|+.|+
T Consensus 14 ~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~-~~~------~~~~~ll~~---~~~D~V~i~t 83 (354)
T 3q2i_A 14 IRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGA-RGH------ASLTDMLAQ---TDADIVILTT 83 (354)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCC-EEE------SCHHHHHHH---CCCSEEEECS
T ss_pred ceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCC-cee------CCHHHHhcC---CCCCEEEECC
Confidence 4789999999998877776666 6733445677777755 4566786 333 234444443 2699999999
Q ss_pred CCHHHHHHHHHHhccCCceEEEEccCCCCCccccc-chheee--ceEE-EeeecCCCcccCcHHHHHHHHHcCCCC
Q 017431 265 GNVSVMRAALECCHKGWGTSVIVGVAASGQEISTR-PFQLVT--GRVW-KGTAFGGFKSRSQVPWLVDKYMKKEIK 336 (371)
Q Consensus 265 g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~-~~~~~~--~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (371)
......+.+.+++.. |+-|.+..+.....-... .....+ +..+ .+.. .+....+..+-+++.++.+-
T Consensus 84 p~~~h~~~~~~al~~--gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~~---~r~~p~~~~~k~~i~~g~iG 154 (354)
T 3q2i_A 84 PSGLHPTQSIECSEA--GFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQ---NRRNATLQLLKRAMQEKRFG 154 (354)
T ss_dssp CGGGHHHHHHHHHHT--TCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCG---GGGSHHHHHHHHHHHTTTTC
T ss_pred CcHHHHHHHHHHHHC--CCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEEc---ccCCHHHHHHHHHHhcCCCC
Confidence 886667777888877 455666553221110000 001111 2222 2222 22223577778888887753
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=94.50 E-value=0.085 Score=48.34 Aligned_cols=35 Identities=26% Similarity=0.299 Sum_probs=28.0
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK 223 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~ 223 (371)
.+|||+|+ |.+|...++.+...|+ +|++++++.++
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~ 37 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRRASS 37 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC----
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCCcc
Confidence 68999988 9999999998888898 89999887653
|
| >2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A* | Back alignment and structure |
|---|
Probab=94.48 E-value=0.083 Score=46.69 Aligned_cols=84 Identities=18% Similarity=0.111 Sum_probs=53.9
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHH
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 268 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~ 268 (371)
+|.|+|+|.+|.+.+..+.. |. +|++.++++++.+.+.+.|... .. . .+ .+ ..+|+|+.|+..+.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~~~~~~~~~~~~g~~~-~~-~---~~---~~-----~~~D~vi~~v~~~~ 67 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RF-PTLVWNRTFEKALRHQEEFGSE-AV-P---LE---RV-----AEARVIFTCLPTTR 67 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TS-CEEEECSSTHHHHHHHHHHCCE-EC-C---GG---GG-----GGCSEEEECCSSHH
T ss_pred eEEEEcccHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHHCCCcc-cC-H---HH---HH-----hCCCEEEEeCCChH
Confidence 58899999999987777666 98 7999999888877766655432 11 0 11 01 14788888888755
Q ss_pred HHHHHHH----HhccCCceEEEEc
Q 017431 269 VMRAALE----CCHKGWGTSVIVG 288 (371)
Q Consensus 269 ~~~~~~~----~l~~~~G~iv~~g 288 (371)
.++..++ .+.++ ..++.++
T Consensus 68 ~~~~v~~~l~~~l~~~-~~vv~~s 90 (289)
T 2cvz_A 68 EVYEVAEALYPYLREG-TYWVDAT 90 (289)
T ss_dssp HHHHHHHHHTTTCCTT-EEEEECS
T ss_pred HHHHHHHHHHhhCCCC-CEEEECC
Confidence 3444443 33443 4455443
|
| >3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=94.43 E-value=0.06 Score=43.30 Aligned_cols=96 Identities=16% Similarity=0.189 Sum_probs=65.6
Q ss_pred hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC-cEEecCCCCCchHHHHHHhhcCCCcc
Q 017431 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV-TEFVNPKDHDKPIQQVLVDLTDGGVD 258 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~-~~vi~~~~~~~~~~~~~~~~~~gg~d 258 (371)
+...+.++.+||-+|+|. |..+..+++.. . +|++++.+++..+.+++... ..++. .+ .....+.+|
T Consensus 11 ~~~~~~~~~~vLDiG~G~-G~~~~~l~~~~-~-~v~~vD~s~~~~~~a~~~~~~v~~~~-----~d-----~~~~~~~~D 77 (170)
T 3i9f_A 11 PNIFEGKKGVIVDYGCGN-GFYCKYLLEFA-T-KLYCIDINVIALKEVKEKFDSVITLS-----DP-----KEIPDNSVD 77 (170)
T ss_dssp HHHHSSCCEEEEEETCTT-CTTHHHHHTTE-E-EEEEECSCHHHHHHHHHHCTTSEEES-----SG-----GGSCTTCEE
T ss_pred HhcCcCCCCeEEEECCCC-CHHHHHHHhhc-C-eEEEEeCCHHHHHHHHHhCCCcEEEe-----CC-----CCCCCCceE
Confidence 344567888999998863 66677777765 4 89999999998888876522 12221 11 222234799
Q ss_pred EEEEccCC------HHHHHHHHHHhccCCceEEEEcc
Q 017431 259 YSFECIGN------VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 259 vvid~~g~------~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
+|+....- ...++.+.+.|+++ |+++....
T Consensus 78 ~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~~~~~ 113 (170)
T 3i9f_A 78 FILFANSFHDMDDKQHVISEVKRILKDD-GRVIIIDW 113 (170)
T ss_dssp EEEEESCSTTCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred EEEEccchhcccCHHHHHHHHHHhcCCC-CEEEEEEc
Confidence 99864322 34588999999997 99987754
|
| >2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A | Back alignment and structure |
|---|
Probab=94.41 E-value=0.2 Score=41.46 Aligned_cols=95 Identities=16% Similarity=0.214 Sum_probs=60.7
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc----CCcEEecCCCCCchHHHHHHhhcCCCccE
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLTDGGVDY 259 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~~~~~~~~gg~dv 259 (371)
+.++ +||-+|+|. |..+..+++. |+ +|++++.+++..+.+++. +....+...+. .+. ....+.+|+
T Consensus 28 ~~~~-~vLdiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~-----~~~~~~fD~ 97 (202)
T 2kw5_A 28 IPQG-KILCLAEGE-GRNACFLASL-GY-EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNL-ADF-----DIVADAWEG 97 (202)
T ss_dssp SCSS-EEEECCCSC-THHHHHHHTT-TC-EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBT-TTB-----SCCTTTCSE
T ss_pred CCCC-CEEEECCCC-CHhHHHHHhC-CC-eEEEEECCHHHHHHHHHHHHhcCCceEEEEcCh-hhc-----CCCcCCccE
Confidence 4566 898888864 6667777765 77 999999999877776543 32222211110 010 111237999
Q ss_pred EEEccCC------HHHHHHHHHHhccCCceEEEEcc
Q 017431 260 SFECIGN------VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 260 vid~~g~------~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
|+.+... ...++.+.+.|+++ |.++....
T Consensus 98 v~~~~~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~ 132 (202)
T 2kw5_A 98 IVSIFCHLPSSLRQQLYPKVYQGLKPG-GVFILEGF 132 (202)
T ss_dssp EEEECCCCCHHHHHHHHHHHHTTCCSS-EEEEEEEE
T ss_pred EEEEhhcCCHHHHHHHHHHHHHhcCCC-cEEEEEEe
Confidence 9975432 24577888889997 99887654
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=94.38 E-value=0.13 Score=46.98 Aligned_cols=36 Identities=22% Similarity=0.207 Sum_probs=30.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHH--cCCCeEEEEcCChh
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKA--AGASRVIGIDIDPK 222 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~--~g~~~v~~v~~~~~ 222 (371)
.+.+|||+|+ |.+|...++.+.. .|+ +|++++++..
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~-~V~~~~r~~~ 47 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPKA-KVVVLDKFRS 47 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTTS-EEEEEECCCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCC-eEEEEECCCc
Confidence 4689999988 9999998888888 899 8999887554
|
| >3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum} | Back alignment and structure |
|---|
Probab=94.36 E-value=0.066 Score=47.61 Aligned_cols=38 Identities=34% Similarity=0.431 Sum_probs=34.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK 223 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~ 223 (371)
-.|++|.|+|.|.+|...++.++.+|+ +|++.+++.++
T Consensus 120 l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~ 157 (290)
T 3gvx_A 120 LYGKALGILGYGGIGRRVAHLAKAFGM-RVIAYTRSSVD 157 (290)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSCCC
T ss_pred eecchheeeccCchhHHHHHHHHhhCc-EEEEEeccccc
Confidence 457899999999999999999999999 99999887654
|
| >4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=94.34 E-value=0.24 Score=45.69 Aligned_cols=134 Identities=16% Similarity=0.143 Sum_probs=76.3
Q ss_pred CEEEEEcCChHHHHHHHHHHH--------cCCCeEEE-EcCChhhHH-HHHhcCCcEEecCCCCCchHHHHHHhhcCCCc
Q 017431 188 SIVAVFGLGTVGLAVAEGAKA--------AGASRVIG-IDIDPKKFD-RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGV 257 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~--------~g~~~v~~-v~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~ 257 (371)
=+|.|+|+|.+|..-+...+. -++ ++++ +++++++.+ +++++|...++ .++.+.+.+ ..+
T Consensus 26 irvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~-~lvav~d~~~~~a~~~a~~~g~~~~y------~d~~ell~~---~~i 95 (393)
T 4fb5_A 26 LGIGLIGTGYMGKCHALAWNAVKTVFGDVERP-RLVHLAEANAGLAEARAGEFGFEKAT------ADWRALIAD---PEV 95 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHTTHHHHHCSSCCC-EEEEEECC--TTHHHHHHHHTCSEEE------SCHHHHHHC---TTC
T ss_pred ccEEEEcCCHHHHHHHHHHHhhhhhhccCCCc-EEEEEECCCHHHHHHHHHHhCCCeec------CCHHHHhcC---CCC
Confidence 378899999999754332221 245 4554 566666554 66788987665 334444433 279
Q ss_pred cEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCccccc-chheee--ceEE-EeeecCCCcccCcHHHHHHHHHcC
Q 017431 258 DYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTR-PFQLVT--GRVW-KGTAFGGFKSRSQVPWLVDKYMKK 333 (371)
Q Consensus 258 dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~-~~~~~~--~~~~-~g~~~~~~~~~~~~~~~~~~~~~~ 333 (371)
|+|+-|+......+.+.++|.. |+=|.+..+.....-+.. .....+ +..+ .+. .++....+..+-+++.+|
T Consensus 96 DaV~IatP~~~H~~~a~~al~a--GkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~vg~---~~R~~p~~~~~k~~i~~G 170 (393)
T 4fb5_A 96 DVVSVTTPNQFHAEMAIAALEA--GKHVWCEKPMAPAYADAERMLATAERSGKVAALGY---NYIQNPVMRHIRKLVGDG 170 (393)
T ss_dssp CEEEECSCGGGHHHHHHHHHHT--TCEEEECSCSCSSHHHHHHHHHHHHHSSSCEEECC---GGGGCHHHHHHHHHHHTT
T ss_pred cEEEECCChHHHHHHHHHHHhc--CCeEEEccCCcccHHHHHHhhhhHHhcCCcccccc---ccccChHHHHHHHHHHcC
Confidence 9999999886668888888887 566777664322111100 001111 2222 222 122234577788888887
Q ss_pred CCC
Q 017431 334 EIK 336 (371)
Q Consensus 334 ~~~ 336 (371)
++-
T Consensus 171 ~iG 173 (393)
T 4fb5_A 171 VIG 173 (393)
T ss_dssp TTC
T ss_pred CCc
Confidence 654
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=94.33 E-value=0.32 Score=41.41 Aligned_cols=95 Identities=9% Similarity=0.024 Sum_probs=60.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
....+|+|+|+|.+|...++.+...|. |+++++++++.+.++ .+.. ++.-.. .-.+.+.+..-.++|.++-++
T Consensus 7 ~~~~~viI~G~G~~G~~la~~L~~~g~--v~vid~~~~~~~~~~-~~~~-~i~gd~---~~~~~l~~a~i~~ad~vi~~~ 79 (234)
T 2aef_A 7 AKSRHVVICGWSESTLECLRELRGSEV--FVLAEDENVRKKVLR-SGAN-FVHGDP---TRVSDLEKANVRGARAVIVDL 79 (234)
T ss_dssp ---CEEEEESCCHHHHHHHHHSTTSEE--EEEESCGGGHHHHHH-TTCE-EEESCT---TCHHHHHHTTCTTCSEEEECC
T ss_pred CCCCEEEEECCChHHHHHHHHHHhCCe--EEEEECCHHHHHHHh-cCCe-EEEcCC---CCHHHHHhcCcchhcEEEEcC
Confidence 345789999999999988888887776 888899888877776 6643 332221 111234333223799999999
Q ss_pred CCHHH---HHHHHHHhccCCceEEEE
Q 017431 265 GNVSV---MRAALECCHKGWGTSVIV 287 (371)
Q Consensus 265 g~~~~---~~~~~~~l~~~~G~iv~~ 287 (371)
+.... .....+.+.+. .+++.-
T Consensus 80 ~~d~~n~~~~~~a~~~~~~-~~iia~ 104 (234)
T 2aef_A 80 ESDSETIHCILGIRKIDES-VRIIAE 104 (234)
T ss_dssp SCHHHHHHHHHHHHHHCSS-SEEEEE
T ss_pred CCcHHHHHHHHHHHHHCCC-CeEEEE
Confidence 88532 23344445553 466654
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=94.31 E-value=0.082 Score=46.18 Aligned_cols=79 Identities=18% Similarity=0.094 Sum_probs=47.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEE-EcCChhhHHH-H---HhcCCcE-E--ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIG-IDIDPKKFDR-A---KNFGVTE-F--VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~-v~~~~~~~~~-~---~~~g~~~-v--i~~~~~~~~~~~~~~~~~~-- 254 (371)
.+++|||+|+ |++|.+.++.+...|+ +|++ ..+++++.+. + ++.+... + .|..+ .....+.+.+...
T Consensus 25 ~~k~vlVTGas~gIG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 102 (267)
T 4iiu_A 25 MSRSVLVTGASKGIGRAIARQLAADGF-NIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVAN-REQCREVLEHEIAQH 102 (267)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHh
Confidence 3578999988 9999999999989999 6655 5555544332 2 2333322 2 23322 1222222222211
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|++++++|.
T Consensus 103 g~id~li~nAg~ 114 (267)
T 4iiu_A 103 GAWYGVVSNAGI 114 (267)
T ss_dssp CCCSEEEECCCC
T ss_pred CCccEEEECCCC
Confidence 379999998874
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 371 | ||||
| d1d1ta2 | 176 | c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human ( | 3e-51 | |
| d1cdoa1 | 199 | b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase | 7e-46 | |
| d1p0fa2 | 174 | c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog | 2e-45 | |
| d2fzwa1 | 197 | b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase | 3e-45 | |
| d1e3ia2 | 174 | c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse ( | 1e-43 | |
| d2jhfa2 | 176 | c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse ( | 1e-41 | |
| d2fzwa2 | 176 | c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human ( | 6e-41 | |
| d1p0fa1 | 198 | b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro | 3e-40 | |
| d1e3ia1 | 202 | b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase | 4e-40 | |
| d2jhfa1 | 198 | b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase | 3e-38 | |
| d1cdoa2 | 175 | c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga | 8e-36 | |
| d1f8fa1 | 194 | b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr | 1e-31 | |
| d1f8fa2 | 174 | c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase { | 1e-31 | |
| d1uufa1 | 179 | b.35.1.2 (A:3-144,A:313-349) Hypothetical protein | 6e-23 | |
| d1vj0a1 | 184 | b.35.1.2 (A:2-155,A:338-367) Hypothetical protein | 1e-21 | |
| d1llua1 | 175 | b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase | 3e-21 | |
| d1piwa1 | 192 | b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy | 5e-21 | |
| d1jqba2 | 174 | c.2.1.1 (A:1140-1313) Bacterial secondary alcohol | 4e-19 | |
| d1jvba1 | 177 | b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase | 5e-17 | |
| d1e3ja1 | 178 | b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor | 1e-16 | |
| d1kola1 | 201 | b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog | 1e-16 | |
| d1rjwa1 | 171 | b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase | 1e-14 | |
| d1pl8a1 | 185 | b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor | 1e-13 | |
| d1vj0a2 | 182 | c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T | 1e-13 | |
| d1h2ba1 | 171 | b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas | 4e-13 | |
| d1kola2 | 195 | c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps | 7e-12 | |
| d1jqba1 | 177 | b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon | 3e-11 | |
| d1h2ba2 | 172 | c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo | 6e-11 | |
| d1pl8a2 | 171 | c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh | 1e-09 | |
| d1uufa2 | 168 | c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc | 2e-08 | |
| d1yb5a1 | 150 | b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductas | 3e-07 | |
| d1e3ja2 | 170 | c.2.1.1 (A:143-312) Ketose reductase (sorbitol deh | 5e-07 | |
| d1iz0a1 | 131 | b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase | 2e-06 | |
| d1piwa2 | 168 | c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase | 3e-06 | |
| d1xa0a1 | 152 | b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo | 4e-05 | |
| d1pqwa_ | 183 | c.2.1.1 (A:) Putative enoyl reductase domain of po | 5e-04 | |
| d1qora2 | 179 | c.2.1.1 (A:113-291) Quinone oxidoreductase {Escher | 5e-04 | |
| d1bg6a2 | 184 | c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvalin | 6e-04 | |
| d1mv8a2 | 202 | c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pse | 6e-04 | |
| d1qora1 | 147 | b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductas | 0.001 | |
| d1dlja2 | 196 | c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGD | 0.001 | |
| d1gu7a1 | 175 | b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu | 0.002 |
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Score = 166 bits (422), Expect = 3e-51
Identities = 92/175 (52%), Positives = 118/175 (67%)
Query: 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID 218
AP +KVCL+GCG TG GA T KV+PGS VFGLG VGL+V G K+AGASR+IGID
Sbjct: 2 APPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGID 61
Query: 219 IDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH 278
++ KF++A G TE ++PKD KPI +VL ++T V Y+FE IG++ M AL CH
Sbjct: 62 LNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCH 121
Query: 279 KGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 333
+GTSV+VGV S + ++ P L TGR WKG FGG KSR VP LV +++ K
Sbjct: 122 MNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAK 176
|
| >d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Score = 153 bits (388), Expect = 7e-46
Identities = 91/192 (47%), Positives = 123/192 (64%), Gaps = 1/192 (0%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVAWE NKPLVIE+++V P A E+RIKI+ T +CHTD Y + FP +LGH
Sbjct: 9 CKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGH 68
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
E AGIVESVG GVTE QPG+ VIP + ++C EC+FC+S KTN C K A + +M+ +
Sbjct: 69 EGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGW-ANESPDVMSPK 127
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
++RF+ G+ + F+GTSTFSQYTVV+ ++VAKIDP LD+ + + A+
Sbjct: 128 ETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVNDAIDLM 187
Query: 182 AKVEPGSIVAVF 193
+ V
Sbjct: 188 KHGKCIRTVLSL 199
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Score = 151 bits (382), Expect = 2e-45
Identities = 90/176 (51%), Positives = 117/176 (66%), Gaps = 2/176 (1%)
Query: 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID 218
APL+ CL+GCG TG GA NTAKV PGS AVFGLG VG + G KAAGASR+IG+
Sbjct: 1 APLES-CLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVG 59
Query: 219 IDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH 278
KF +A G TE +NPKD+DKPI +V+ + T+GGVDY+ EC G + M AL+ +
Sbjct: 60 THKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTY 119
Query: 279 KGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKE 334
G G +V++G+A+ + + P L+TGR KG+ FGGFK +V LVD YMKK+
Sbjct: 120 CGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKKK 174
|
| >d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Score = 152 bits (384), Expect = 3e-45
Identities = 109/191 (57%), Positives = 129/191 (67%), Gaps = 1/191 (0%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVAWE KPL IE+++VAPP+A EVRIKI+ TA+CHTDAYT SG DPEG FP ILGH
Sbjct: 7 CKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGH 66
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
AGIVESVGEGVT+++ GD VIP Y +C ECKFC + KTNLC K+R G G +M D
Sbjct: 67 LGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-LMPDG 125
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
SRF+ GK I H+MGTSTFS+YTVV D+SVAKIDP +D+ A
Sbjct: 126 TSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDEINKAFELM 185
Query: 182 AKVEPGSIVAV 192
+ V
Sbjct: 186 HSGKSIRTVVK 196
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Score = 147 bits (370), Expect = 1e-43
Identities = 86/176 (48%), Positives = 115/176 (65%), Gaps = 2/176 (1%)
Query: 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID 218
A L++VCL+GCG +G GA NTAKV PGS AVFGLG VGL+ G K AGASR+I ID
Sbjct: 1 ANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAID 60
Query: 219 IDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH 278
I+ +KF +AK G T+ +NP++ DKP+Q V+ +LT GGVDYS +C G ++AA++C
Sbjct: 61 INGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTV 120
Query: 279 KGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKE 334
GWG+ +VG E++ ++ GR GT FGG+KS VP LV Y K+
Sbjct: 121 LGWGSCTVVGA--KVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKK 174
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Score = 142 bits (358), Expect = 1e-41
Identities = 97/176 (55%), Positives = 124/176 (70%)
Query: 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID 218
+PL+KVCL+GCG TG G+ AKV GS AVFGLG VGL+V G KAAGA+R+IG+D
Sbjct: 1 SPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVD 60
Query: 219 IDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH 278
I+ KF +AK G TE VNP+D+ KPIQ+VL ++++GGVD+SFE IG + M AL CC
Sbjct: 61 INKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQ 120
Query: 279 KGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKE 334
+ +G SVIVGV Q +S P L++GR WKG FGGFKS+ VP LV +M K+
Sbjct: 121 EAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKK 176
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Score = 140 bits (352), Expect = 6e-41
Identities = 130/176 (73%), Positives = 148/176 (84%)
Query: 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID 218
APLDKVCLLGCG+ TG GA NTAK+EPGS+ AVFGLG VGLAV G K AGASR+IG+D
Sbjct: 1 APLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVD 60
Query: 219 IDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH 278
I+ KF RAK FG TE +NP+D KPIQ+VL+++TDGGVDYSFECIGNV VMRAALE CH
Sbjct: 61 INKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACH 120
Query: 279 KGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKE 334
KGWG SV+VGVAASG+EI+TRPFQLVTGR WKGTAFGG+KS VP LV +YM K+
Sbjct: 121 KGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKK 176
|
| >d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Score = 139 bits (350), Expect = 3e-40
Identities = 88/201 (43%), Positives = 120/201 (59%), Gaps = 12/201 (5%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAVAWEP+KPL +E + VAPP+A EVRIKIL + +C +D+ P FP ILGH
Sbjct: 9 CKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSK-FPVILGH 67
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
EA G+VES+G GVT V+PGD VIP + +C C+ CKS +N C K +M D
Sbjct: 68 EAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAK-TGLMADM 126
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
SRF+ GKPIY+ MGTSTF++YTVV D++VAKIDP+ ++ + +
Sbjct: 127 TSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKINVNFLVSTKLTL---------- 176
Query: 182 AKVEPGSIVAVFGLGTVGLAV 202
++ + G G + +
Sbjct: 177 DQINKAFELLSSGQGVRSIMI 197
|
| >d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Score = 138 bits (349), Expect = 4e-40
Identities = 85/194 (43%), Positives = 120/194 (61%), Gaps = 7/194 (3%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAA+AW+ PL IE+++V+PP+A EVRI+++ T +C TD + LFP +LGH
Sbjct: 9 CKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATD-PKKKALFPVVLGH 67
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGV---MM 118
E AGIVESVG GVT +PGD VIP + +C+ CK C S TNLCGK+R + +M
Sbjct: 68 ECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELM 127
Query: 119 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 178
DR SRF+ G+ IYHFMG S+FSQYTVV + ++A++D + LD + + A+
Sbjct: 128 EDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLVTHALPFESINDAI 187
Query: 179 WNTAKVEPGSIVAV 192
++ G +
Sbjct: 188 ---DLMKEGKSIRT 198
|
| >d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Score = 133 bits (336), Expect = 3e-38
Identities = 92/193 (47%), Positives = 115/193 (59%), Gaps = 5/193 (2%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
CKAAV WE KP IE+V+VAPP+A EVRIK++ T +C +D + SG P I GH
Sbjct: 9 CKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP-LPVIAGH 67
Query: 62 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
EAAGIVES+GEGVT V+PGD VIP + +C +C+ CK + N C K + G M D
Sbjct: 68 EAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ-DG 126
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 181
SRF+ GKPI+HF+GTSTFSQYTVV ++SVAKID LD L V
Sbjct: 127 TSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAFALD---PLITHVLPFEKINEGF 183
Query: 182 AKVEPGSIVAVFG 194
+ G +
Sbjct: 184 DLLRSGESIRTIL 196
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Score = 126 bits (317), Expect = 8e-36
Identities = 107/176 (60%), Positives = 130/176 (73%), Gaps = 1/176 (0%)
Query: 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID 218
APLD VCLLGCGV TG GA NTAKVEPGS AVFGLG VGLA G +AGA R+I +D
Sbjct: 1 APLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVD 60
Query: 219 IDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH 278
++P KF++AK FG T+FVNP DH +PI QVL +T+GGVD+S EC+GNV VMR ALE C
Sbjct: 61 LNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCL 120
Query: 279 KGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKE 334
KGWG SV+VG +++TRP QL+ GR WKG+ FGGFK + VP +V Y+ K+
Sbjct: 121 KGWGVSVLVGW-TDLHDVATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKK 175
|
| >d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Score = 116 bits (291), Expect = 1e-31
Identities = 50/192 (26%), Positives = 85/192 (44%), Gaps = 5/192 (2%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 62
AAV ++ +++ PQ EV +K++ T +CHTD K P P +LGHE
Sbjct: 5 IAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVP-LPAVLGHE 63
Query: 63 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRK 122
+GI+E++G VTE+Q GDHV+ Y C +C C +G C + G +G
Sbjct: 64 GSGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGN- 121
Query: 123 SRFSINGK--PIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN 180
+ + HF S+F+ Y + + + K+ P D++ A+ +
Sbjct: 122 HALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQLVKFYAFDEINQAAIDS 181
Query: 181 TAKVEPGSIVAV 192
+ I+ +
Sbjct: 182 RKGITLKPIIKI 193
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Score = 115 bits (288), Expect = 1e-31
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 4/176 (2%)
Query: 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI 219
P++ + LGCG+ TG GA N KV P S +G G VGL+ AK GAS +I +DI
Sbjct: 2 PIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDI 61
Query: 220 DPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 279
+ + AK G T +N K D + ++TDGGV+++ E G+ +++
Sbjct: 62 VESRLELAKQLGATHVINSKTQD--PVAAIKEITDGGVNFALESTGSPEILKQG-VDALG 118
Query: 280 GWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKSRSQVPWLVDKYMKKE 334
G +VG G L+ G+ G G + +P LV Y + +
Sbjct: 119 ILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGK 174
|
| >d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Score = 92.3 bits (228), Expect = 6e-23
Identities = 45/177 (25%), Positives = 73/177 (41%), Gaps = 16/177 (9%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 62
KA A+ +PL D+ P +V+I+I + +CH+D + + ++PC+ GHE
Sbjct: 2 KAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHE 61
Query: 63 AAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 121
G V +VG+ V + PGD V + C C+ C+ C+ G N C + G T
Sbjct: 62 IVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTG-TYNSPT---- 116
Query: 122 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ-APLDKVCLLGCGVPTGLGA 177
P +SQ VVH+ V +I + + + L
Sbjct: 117 ---------PDEPGHTLGGYSQQIVVHERYVLRIRVADIEMIRADQINEAYERMLRG 164
|
| >d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Score = 89.1 bits (220), Expect = 1e-21
Identities = 42/198 (21%), Positives = 73/198 (36%), Gaps = 26/198 (13%)
Query: 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
A V + N+PLV ++ +++ G + ++IL +C +D + + G+DP P ILGH
Sbjct: 5 AHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGH 64
Query: 62 EAAGIVESVGEGVTEVQPGD-----HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGV 116
E AG V V ++ ++ C EC +CK K R G
Sbjct: 65 EGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYG--- 121
Query: 117 MMNDRKSRFSINGKPIYHFMGTSTFSQYTVVH-DVSVAKIDPQAPLDKVCLLGCGVPTGL 175
+N S + H G +S + V+ + V K+ + L
Sbjct: 122 -INRGCSEYP-------HLRG--CYSSHIVLDPETDVLKVSEKITHRLP--LKEAN---- 165
Query: 176 GAVWNTAKVEPGSIVAVF 193
+ V ++
Sbjct: 166 -KALELMESREALKVILY 182
|
| >d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 87.3 bits (215), Expect = 3e-21
Identities = 52/196 (26%), Positives = 77/196 (39%), Gaps = 30/196 (15%)
Query: 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCIL 59
KAAV PL IE+V+V P G+V +KI + +CHTD + G P + P I
Sbjct: 5 TMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIP 64
Query: 60 GHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 118
GHE G V +VG GVT V+ GD V IP C C+ C +G LC
Sbjct: 65 GHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLC------------- 111
Query: 119 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 178
+ + +++Y + V + P + + G + +
Sbjct: 112 ---------ESQQNTGYSVNGGYAEYVLADPNYVGIL----PKNVKATIHPGKLDDINQI 158
Query: 179 WNTAK--VEPGSIVAV 192
+ + G IV
Sbjct: 159 LDQMRAGQIEGRIVLE 174
|
| >d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 87.6 bits (216), Expect = 5e-21
Identities = 30/196 (15%), Positives = 60/196 (30%), Gaps = 20/196 (10%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPP--QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILG 60
+ + + P ++ IKI +C +D + +G P ++G
Sbjct: 8 EGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVG 67
Query: 61 HEAAGIVESVGEGVTE-VQPGDH-VIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 118
HE G V +G ++ G + C EC CK+ C
Sbjct: 68 HEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYC------------- 114
Query: 119 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 178
K + + ++ ++ Y VH+ V I ++ + + GV +
Sbjct: 115 --TKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAFERM 172
Query: 179 WNTAKVEPGSIVAVFG 194
V + +
Sbjct: 173 -EKGDVRYRFTLVGYD 187
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Score = 81.9 bits (201), Expect = 4e-19
Identities = 47/172 (27%), Positives = 69/172 (40%), Gaps = 8/172 (4%)
Query: 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI 219
PL+ ++ + TG A +E GS V V G+G VGL GAK GA R+IG+
Sbjct: 2 PLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGS 60
Query: 220 DPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 279
P + AK +G T+ +N + QV+ GVD G + A++
Sbjct: 61 RPICVEAAKFYGATDILNY-KNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKP 119
Query: 280 GWGTSVIVGVAASGQEISTRPFQLVTG---RVWKGTAFGGFKSRSQVPWLVD 328
G G + SG + + G + KG G R + L D
Sbjct: 120 G-GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPG--GRLRAERLRD 168
|
| >d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Score = 75.8 bits (185), Expect = 5e-17
Identities = 38/185 (20%), Positives = 66/185 (35%), Gaps = 31/185 (16%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL-------- 54
+A E KPL ++++ V P+ +V IK+ +CH+D + G+
Sbjct: 2 RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVK 61
Query: 55 FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGA 114
P LGHE AG +E VG+ V GD V C +C+ G+ +LC R
Sbjct: 62 LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPR----- 116
Query: 115 GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS-VAKIDPQAPLDKVCLLGCGVPT 173
+++Y +V + K+ P+ +
Sbjct: 117 -----------------WLGINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANE 159
Query: 174 GLGAV 178
+ +
Sbjct: 160 AIDNL 164
|
| >d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Score = 75.0 bits (183), Expect = 1e-16
Identities = 41/194 (21%), Positives = 75/194 (38%), Gaps = 26/194 (13%)
Query: 4 AAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSG---KDPEGLFPCILG 60
+AV ++ N L +E + P+ EV +++ + +C +D + + D P ++G
Sbjct: 4 SAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIG 62
Query: 61 HEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 120
HEA+G V VG+ V ++ GD V CR C+FCK GK NLC
Sbjct: 63 HEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLC--------------- 107
Query: 121 RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN 180
+ ++Y V K+ + ++ + + A
Sbjct: 108 ------PDLTFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDAF-E 160
Query: 181 TAKVEPGSIVAVFG 194
A+ + + + V
Sbjct: 161 AARKKADNTIKVMI 174
|
| >d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Score = 75.3 bits (184), Expect = 1e-16
Identities = 41/218 (18%), Positives = 73/218 (33%), Gaps = 28/218 (12%)
Query: 3 KAAVAWEPNKPLVIEDVQV-------APPQAGEVRIKILFTALCHTDAYTWSGKDPEGLF 55
+ V K + ++ + V +K++ T +C +D + G
Sbjct: 3 RGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRG-RTTAQV 60
Query: 56 PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAG 115
+LGHE G V G V +Q GD V + C C+ CK T +C V A G
Sbjct: 61 GLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGG 120
Query: 116 VMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVH--DVSVAKIDPQAPLDKVCLLGCGVPT 173
++ ++Y +V D ++ K+ + + + V
Sbjct: 121 AYGYVDMGDWTG------------GQAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGV 168
Query: 174 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA 211
+ ++ + A G F G V + K A
Sbjct: 169 QVISLDD-APRGYG----EFDAGVPKKFVIDPHKTFSA 201
|
| >d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Score = 68.9 bits (167), Expect = 1e-14
Identities = 50/196 (25%), Positives = 75/196 (38%), Gaps = 32/196 (16%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCIL-GH 61
KAAV + +PL I++V+ GEV ++I +CHTD + G P ++ GH
Sbjct: 2 KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGH 61
Query: 62 EAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 120
E GIVE VG GVT ++ GD V IP + C C +C SG+ LC
Sbjct: 62 EGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLC--------------- 106
Query: 121 RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCL--LGCGVPTGLGAV 178
+ + +++Y V KI ++ L + L
Sbjct: 107 -------EHQKNAGYSVDGGYAEYCRAAADYVVKIPDNTIIEVQPLEKINEVFDRMLKGQ 159
Query: 179 WNTAKVEPGSIVAVFG 194
G +V
Sbjct: 160 I------NGRVVLTLE 169
|
| >d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 66.5 bits (161), Expect = 1e-13
Identities = 38/193 (19%), Positives = 62/193 (32%), Gaps = 28/193 (14%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL---FPCIL 59
+ V P L +E+ + P EV +++ +C +D + W P +L
Sbjct: 9 LSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVL 67
Query: 60 GHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 119
GHEA+G VE VG V ++PGD V A +FCK G+ NL + N
Sbjct: 68 GHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGN 127
Query: 120 DRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVW 179
++ + K+ +
Sbjct: 128 ---------------------LCRFYKHNAAFCYKLPDNVKPLVTHRFPLEKAL---EAF 163
Query: 180 NTAKVEPGSIVAV 192
T K G + +
Sbjct: 164 ETFKKGLGLKIML 176
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Score = 66.5 bits (161), Expect = 1e-13
Identities = 35/159 (22%), Positives = 62/159 (38%), Gaps = 6/159 (3%)
Query: 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 220
LD + + C T A + G V + G G +GL A++ GA VI I
Sbjct: 3 LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGS 62
Query: 221 PKKFDRAKNFGVTEFVNPKDH--DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH 278
P + A+ G +N ++ ++ + ++ G D+ E G+ + E
Sbjct: 63 PNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLR 122
Query: 279 KGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF 317
+G G + GVA + + ++ + V K F G
Sbjct: 123 RG-GFYSVAGVAVPQDPVPFKVYEWL---VLKNATFKGI 157
|
| >d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Score = 65.1 bits (157), Expect = 4e-13
Identities = 47/194 (24%), Positives = 68/194 (35%), Gaps = 28/194 (14%)
Query: 3 KAAVAWEPNKPLVIEDVQV-APPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFP---CI 58
KAA E NKPL IEDV +V ++I +CHTD + G E L P
Sbjct: 1 KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYT 60
Query: 59 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 118
LGHE G +E V EGV ++ GD VI C C++G+ C +
Sbjct: 61 LGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLE--------- 111
Query: 119 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 178
F+++ SV K+ ++ + L +
Sbjct: 112 -------------FPGLNIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERL 158
Query: 179 WNTAKVEPGSIVAV 192
G V +
Sbjct: 159 EKGEV--LGRAVLI 170
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Score = 61.8 bits (149), Expect = 7e-12
Identities = 38/159 (23%), Positives = 61/159 (38%), Gaps = 18/159 (11%)
Query: 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 220
+ + L +PTG A V PGS V V G G VGLA A A+ GA+ VI D++
Sbjct: 1 IRDLTCLSDILPTGYHGAVT-AGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLN 59
Query: 221 PKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG--------------- 265
P + AK G D +Q+ L + VD + + +G
Sbjct: 60 PARLAHAKAQGFEIADLSLDTP-LHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEA 118
Query: 266 NVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV 304
+V+ + ++ G I G+ + + +
Sbjct: 119 PATVLNSLMQVTRVA-GKIGIPGLYVTEDPGAVDAAAKI 156
|
| >d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Score = 59.2 bits (142), Expect = 3e-11
Identities = 35/203 (17%), Positives = 60/203 (29%), Gaps = 33/203 (16%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 62
K NK L + + + + ++ L + C +D +T ILGHE
Sbjct: 2 KGFAMLGINK-LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHE 60
Query: 63 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRK 122
A G V VG V + +PGD VI ++G
Sbjct: 61 AVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNG--------------- 105
Query: 123 SRFSINGKPIYHFMGTSTFSQYTVVH--DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN 180
+ + F +Y V+ D+++A + L K+ G +
Sbjct: 106 ----MLAGWKFSNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTHVY---HGFDHIEE 158
Query: 181 TAKVEPGSIVAVFGLGTVGLAVA 203
+ + L A
Sbjct: 159 A--------LLLMKDKPKDLIKA 173
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Score = 58.4 bits (140), Expect = 6e-11
Identities = 37/168 (22%), Positives = 76/168 (45%), Gaps = 11/168 (6%)
Query: 167 LGCGVPTGLGAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD 225
L T AV A+ + PG+ VA+ G+G +G + K + VI +D+ +K
Sbjct: 12 LADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLK 71
Query: 226 RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSV 285
A+ G V+ + P++QV+ GV+ + + +G+ + + + G +
Sbjct: 72 LAERLGADHVVDARRD--PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GRLI 128
Query: 286 IVGVAASGQEISTRPFQLVTGRV-WKGTAFGGFKSRSQVPWLVDKYMK 332
IVG G E+ ++++ V ++G+ G + ++ LV ++
Sbjct: 129 IVGY---GGELRFPTIRVISSEVSFEGSLVG---NYVELHELVTLALQ 170
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.5 bits (130), Expect = 1e-09
Identities = 33/164 (20%), Positives = 57/164 (34%), Gaps = 8/164 (4%)
Query: 173 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 232
G+ A V G V V G G +G+ AKA GA++V+ D+ + +AK G
Sbjct: 14 VGIHAC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGA 72
Query: 233 TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 291
+ V+ G + + EC G + ++A + G +V V
Sbjct: 73 DLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG---GTLVLVGL 129
Query: 292 SGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEI 335
+ + V G F+ + P + K +
Sbjct: 130 GSEMTTVPLLHAAIREV---DIKGVFRYCNTWPVAISMLASKSV 170
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Score = 51.5 bits (122), Expect = 2e-08
Identities = 38/179 (21%), Positives = 62/179 (34%), Gaps = 12/179 (6%)
Query: 157 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIG 216
PQ L V L C T + + PG V V G+G +G + A A GA V
Sbjct: 2 PQEQLAAVAPLLCAGITTYSPL-RHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAF 60
Query: 217 IDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALEC 276
K + AK G E VN ++ D+ + D+ + +
Sbjct: 61 TT-SEAKREAAKALGADEVVNSRNADEMAAHL------KSFDFILNTVAAPHNLDDFTTL 113
Query: 277 CHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEI 335
+ GT +VG A+ + ++ R G+ G + ++D + I
Sbjct: 114 LKRD-GTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIG---GIPETQEMLDFCAEHGI 168
|
| >d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 150 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.0 bits (110), Expect = 3e-07
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 1 MCKAAVAWEPNKPLVIE---DVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFP 56
+ +A +E P V++ D+ V P+ +V IK+ + + Y SG + L P
Sbjct: 2 LMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLP 61
Query: 57 CILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFC 97
G + AG++E+VG+ + + GD V ++
Sbjct: 62 YTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYA 102
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 170 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Score = 47.3 bits (111), Expect = 5e-07
Identities = 28/154 (18%), Positives = 52/154 (33%), Gaps = 12/154 (7%)
Query: 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238
A V+ G+ V V G G +GL AKA GA V + + AKN G +
Sbjct: 19 CRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPR-RLEVAKNCGADVTLVV 77
Query: 239 KDHDKPIQQVLV---DLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE 295
+ ++ + + +C GN + + GT ++VG+ +
Sbjct: 78 DPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRT-GGTLMLVGMGSQMVT 136
Query: 296 ISTRPFQLVTGRVWKG-TAFGGFKSRSQVPWLVD 328
+ + F+ + P ++
Sbjct: 137 VPLVNA------CAREIDIKSVFRYCNDYPIALE 164
|
| >d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Score = 44.4 bits (104), Expect = 2e-06
Identities = 14/59 (23%), Positives = 21/59 (35%)
Query: 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 61
KA V PL + D+ + GEV +++ L D G L P +
Sbjct: 2 KAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPG 60
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.6 bits (104), Expect = 3e-06
Identities = 34/177 (19%), Positives = 63/177 (35%), Gaps = 10/177 (5%)
Query: 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI 219
P L CG T + PG V + GLG +G +K A + I
Sbjct: 2 PSHLAAPLLCGGLTVYSPL-VRNGCGPGKKVGIVGLGGIGSMGTLISK-AMGAETYVISR 59
Query: 220 DPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 279
+K + A G ++ + ++ V S + ++M A+ K
Sbjct: 60 SSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAM----K 115
Query: 280 GWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIK 336
G V + + + +S +P+ + +A G S ++ L+ +K+IK
Sbjct: 116 VGGRIVSISIPEQHEMLSLKPY-GLKAVSISYSALG---SIKELNQLLKLVSEKDIK 168
|
| >d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Score = 41.0 bits (95), Expect = 4e-05
Identities = 10/91 (10%), Positives = 26/91 (28%), Gaps = 3/91 (3%)
Query: 3 KAAVAWEPNKPLV--IEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILG 60
+A V + ++ + + G+V +++ ++++ + D
Sbjct: 5 QAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKT-YPFV 63
Query: 61 HEAAGIVESVGEGVTEVQPGDHVIPCYQAEC 91
V + GD VI
Sbjct: 64 PGIDLAGVVVSSQHPRFREGDEVIATGYEIG 94
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 38.5 bits (88), Expect = 5e-04
Identities = 25/178 (14%), Positives = 52/178 (29%), Gaps = 11/178 (6%)
Query: 167 LGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR 226
G T ++ ++ PG V + A +R+ K +
Sbjct: 6 FGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM 65
Query: 227 AKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSV 285
GV + + D +++LTDG GVD + ++ R G +
Sbjct: 66 LSRLGVEYVGDSRSVD--FADEILELTDGYGVDVVLNSLAGEAIQRG--VQILAPGGRFI 121
Query: 286 IVGVAASGQEISTRPFQLVTGRVWKGTAFGGF------KSRSQVPWLVDKYMKKEIKV 337
+G + S L + + R + ++ +++V
Sbjct: 122 ELGKKDVYADASLGLAALAKSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEV 179
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 179 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Score = 38.5 bits (88), Expect = 5e-04
Identities = 18/151 (11%), Positives = 44/151 (29%), Gaps = 2/151 (1%)
Query: 167 LGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR 226
T + T +++P +A A +++IG +K
Sbjct: 9 SFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQS 68
Query: 227 AKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVI 286
A G + +N ++ D + + L ++T G +L+C +
Sbjct: 69 ALKAGAWQVINYREED--LVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSF 126
Query: 287 VGVAASGQEISTRPFQLVTGRVWKGTAFGGF 317
+ + ++ + G+
Sbjct: 127 GNSSGAVTGVNLGILNQKGSLYVTRPSLQGY 157
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} Length = 184 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Score = 38.4 bits (88), Expect = 6e-04
Identities = 19/112 (16%), Positives = 30/112 (26%), Gaps = 6/112 (5%)
Query: 190 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG---VTEFVNPKDHDKPIQ 246
AV GLG G A A G V+ DID ++ ++ G +
Sbjct: 4 YAVLGLGNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLL 62
Query: 247 QVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIST 298
+ L D + + A +I + G
Sbjct: 63 TSDIGLAVKDADVILIVVPAIHHASIAANIASYISEGQLI--ILNPGATGGA 112
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 202 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 38.4 bits (88), Expect = 6e-04
Identities = 15/52 (28%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Query: 190 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
+++FGLG VG A A G VIG+D+ K D +
Sbjct: 3 ISIFGLGYVGAVCAGCLSARG-HEVIGVDVSSTKIDLINQGKSPIVEPGLEA 53
|
| >d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 147 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Score = 36.9 bits (84), Expect = 0.001
Identities = 26/84 (30%), Positives = 35/84 (41%)
Query: 14 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 73
L + A P E++++ + D Y SG P P LG EAAGIV VG G
Sbjct: 15 LQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSG 74
Query: 74 VTEVQPGDHVIPCYQAECRECKFC 97
V ++ GD V+ A
Sbjct: 75 VKHIKAGDRVVYAQSALGAYSSVH 98
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} Length = 196 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Score = 37.3 bits (85), Expect = 0.001
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 190 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241
+AV G G VGL++ + + V +DI P K D+ N ++
Sbjct: 3 IAVAGSGYVGLSLG--VLLSLQNEVTIVDILPSKVDKINNGLSPIQDEYIEY 52
|
| >d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Score = 36.7 bits (83), Expect = 0.002
Identities = 14/102 (13%), Positives = 27/102 (26%), Gaps = 5/102 (4%)
Query: 1 MCKAAVAWEPNKP-----LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLF 55
+A + + +P ++ EV +K L + + +D G P
Sbjct: 3 TAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPA 62
Query: 56 PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFC 97
EG+ EV + +A
Sbjct: 63 KTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSH 104
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 371 | |||
| d1cdoa1 | 199 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 100.0 | |
| d2fzwa1 | 197 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 100.0 | |
| d1f8fa1 | 194 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 100.0 | |
| d1e3ia1 | 202 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 100.0 | |
| d1e3ja1 | 178 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 100.0 | |
| d1p0fa1 | 198 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 100.0 | |
| d1h2ba1 | 171 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 100.0 | |
| d2jhfa1 | 198 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 100.0 | |
| d1llua1 | 175 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 100.0 | |
| d1pl8a1 | 185 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 100.0 | |
| d1jqba1 | 177 | Bacterial secondary alcohol dehydrogenase {Clostri | 100.0 | |
| d1vj0a1 | 184 | Hypothetical protein TM0436 {Thermotoga maritima [ | 99.98 | |
| d1kola1 | 201 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 99.98 | |
| d1piwa1 | 192 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 99.98 | |
| d1jvba1 | 177 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 99.98 | |
| d1rjwa1 | 171 | Alcohol dehydrogenase {Bacillus stearothermophilus | 99.97 | |
| d1yb5a1 | 150 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 99.97 | |
| d1uufa1 | 179 | Hypothetical protein YahK {Escherichia coli [TaxId | 99.97 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 99.96 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 99.95 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 99.95 | |
| d1qora1 | 147 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 99.95 | |
| d1iz0a1 | 131 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 99.95 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 99.94 | |
| d1xa0a1 | 152 | B. subtilis YhfP homologue {Bacillus stearothermop | 99.94 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 99.94 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 99.94 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 99.94 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 99.94 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 99.94 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 99.93 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 99.92 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 99.92 | |
| d1tt7a1 | 162 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 99.92 | |
| d1o89a1 | 146 | Hypothetical protein YhdH {Escherichia coli [TaxId | 99.92 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 99.92 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 99.91 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 99.91 | |
| d1gu7a1 | 175 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 99.91 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 99.91 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 99.91 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 99.91 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 99.9 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 99.9 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 99.9 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 99.89 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 99.89 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 99.88 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 99.87 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 99.87 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 99.82 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 99.8 | |
| d1vj1a1 | 166 | Putative zinc-binding alcohol dehydrogenase {Mouse | 99.61 | |
| d1v3va1 | 147 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 99.54 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 99.49 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 98.09 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 98.08 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 97.82 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 97.68 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 97.66 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 97.65 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.62 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 97.48 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 97.4 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 97.37 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 97.36 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 97.36 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 97.36 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 97.3 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 97.3 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 97.3 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 97.28 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 97.28 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 97.27 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 97.26 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 97.26 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 97.25 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 97.23 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 97.21 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 97.2 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 97.18 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 97.16 | |
| d1yb2a1 | 250 | Hypothetical protein Ta0852 {Thermoplasma acidophi | 97.15 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 97.14 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 97.13 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 97.07 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 97.05 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 97.03 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 97.02 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 97.02 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 96.99 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 96.98 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 96.95 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 96.95 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 96.94 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 96.93 | |
| d1kpia_ | 291 | CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | 96.93 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 96.92 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 96.92 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 96.9 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 96.9 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 96.9 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 96.88 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 96.88 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 96.87 | |
| d1kpga_ | 285 | CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | 96.84 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 96.81 | |
| d1o54a_ | 266 | Hypothetical protein TM0748 {Thermotoga maritima [ | 96.8 | |
| d1vbfa_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Sulfolo | 96.74 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 96.71 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 96.68 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 96.64 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 96.64 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 96.63 | |
| d2fk8a1 | 280 | Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri | 96.61 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 96.6 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 96.59 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 96.59 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 96.57 | |
| d1zx0a1 | 229 | Guanidinoacetate methyltransferase {Human (Homo sa | 96.53 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 96.52 | |
| d1nkva_ | 245 | Hypothetical Protein YjhP {Escherichia coli [TaxId | 96.52 | |
| d2nxca1 | 254 | PrmA-like protein TTHA0656 (TT0836) {Thermus therm | 96.51 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 96.48 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 96.46 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 96.45 | |
| d1i1na_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Human ( | 96.44 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 96.41 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 96.41 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 96.4 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 96.37 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 96.36 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 96.34 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 96.34 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 96.31 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 96.27 | |
| d1i9ga_ | 264 | Probable methyltransferase Rv2118c {Mycobacterium | 96.26 | |
| d2avna1 | 246 | Hypothetical methyltransferase TM1389 {Thermotoga | 96.21 | |
| d1nw3a_ | 328 | Catalytic, N-terminal domain of histone methyltran | 96.01 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 96.01 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 96.0 | |
| d1xxla_ | 234 | Hypothetical protein YcgJ {Bacillus subtilis [TaxI | 95.95 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 95.9 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 95.9 | |
| d1r18a_ | 223 | Protein-L-isoaspartyl O-methyltransferase {Fruit f | 95.9 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 95.89 | |
| d1vl5a_ | 231 | Hypothetical protein BH2331 {Bacillus halodurans [ | 95.89 | |
| d2b25a1 | 324 | Hypothetical protein FLJ20628 {Human (Homo sapiens | 95.88 | |
| d2o57a1 | 282 | Putative sarcosine dimethylglycine methyltransfera | 95.83 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 95.81 | |
| d1l3ia_ | 186 | Precorrin-6Y methyltransferase (CbiT) {Archaeon Me | 95.74 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 95.62 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 95.57 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 95.56 | |
| d1u2za_ | 406 | Catalytic, N-terminal domain of histone methyltran | 95.52 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 95.48 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 95.47 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 95.36 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 95.31 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 95.28 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 95.16 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 95.15 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 95.14 | |
| d1xj5a_ | 290 | Spermidine synthase {Thale cress (Arabidopsis thal | 95.06 | |
| d1nt2a_ | 209 | Fibrillarin homologue {Archaeon Archaeoglobus fulg | 95.05 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 95.03 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 94.97 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 94.92 | |
| d2fyta1 | 311 | Protein arginine N-methyltransferase 3, PRMT3 {Hum | 94.92 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 94.75 | |
| d1g8sa_ | 230 | Fibrillarin homologue {Archaeon Methanococcus jann | 94.69 | |
| d1ve3a1 | 226 | Hypothetical protein PH0226 {Archaeon Pyrococcus h | 94.69 | |
| d1g8aa_ | 227 | Fibrillarin homologue {Archaeon Pyrococcus horikos | 94.67 | |
| d2as0a2 | 324 | Hypothetical protein PH1915, middle and C-terminal | 94.66 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 94.6 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 94.5 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 94.46 | |
| d1susa1 | 227 | Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag | 94.39 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 94.38 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 94.34 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 94.33 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 94.33 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 94.25 | |
| d1oria_ | 316 | Protein arginine N-methyltransferase 1, PRMT1 {Rat | 94.24 | |
| d2frna1 | 260 | Hypothetical protein PH0793 {Pyrococcus horikoshii | 94.21 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 94.05 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 94.03 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 93.99 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 93.82 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 93.77 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 93.72 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 93.69 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 93.63 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 93.6 | |
| d1uira_ | 312 | Spermidine synthase {Thermus thermophilus [TaxId: | 93.59 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 93.54 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 93.51 | |
| d2o07a1 | 285 | Spermidine synthase {Human (Homo sapiens) [TaxId: | 93.48 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 93.39 | |
| d1dusa_ | 194 | Hypothetical protein MJ0882 {Archaeon Methanococcu | 93.36 | |
| d1iy9a_ | 274 | Spermidine synthase {Bacillus subtilis [TaxId: 142 | 93.32 | |
| d1im8a_ | 225 | Hypothetical protein HI0319 (YecO) {Haemophilus in | 93.2 | |
| d1xvaa_ | 292 | Glycine N-methyltransferase {Rat (Rattus norvegicu | 93.16 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 93.1 | |
| d1inla_ | 295 | Spermidine synthase {Thermotoga maritima [TaxId: 2 | 93.07 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 93.06 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 93.03 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 93.03 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 93.03 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 92.94 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 92.91 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 92.84 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 92.83 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 92.78 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 92.77 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 92.76 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 92.71 | |
| d1wxxa2 | 318 | Hypothetical protein TTHA1280, middle and C-termin | 92.7 | |
| d2b2ca1 | 312 | Spermidine synthase {Caenorhabditis elegans [TaxId | 92.7 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 92.69 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 92.69 | |
| d1xeaa1 | 167 | Putative oxidoreductase VCA1048 {Vibrio cholerae [ | 92.58 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 92.55 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 92.54 | |
| d2avda1 | 219 | COMT domain-containing protein 1, COMTD1 {Human (H | 92.51 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 92.49 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 92.43 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 92.4 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 92.32 | |
| d2bhsa1 | 292 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 92.31 | |
| d1jbqa_ | 355 | Cystathionine beta-synthase {Human (Homo sapiens) | 92.27 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 92.23 | |
| d2b78a2 | 317 | Hypothetical protein SMu776, middle and C-terminal | 92.22 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 92.17 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 92.17 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 92.14 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 92.08 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 92.07 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 91.8 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 91.79 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 91.72 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 91.59 | |
| d1mjfa_ | 276 | Putative spermidine synthetase PF0127 (SpeE) {Arch | 91.5 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 91.49 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 91.46 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 91.44 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 91.37 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 91.32 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 91.32 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 91.28 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 91.28 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 91.06 | |
| d1g6q1_ | 328 | Arginine methyltransferase, HMT1 {Baker's yeast (S | 91.05 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 90.96 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 90.96 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 90.94 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 90.93 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 90.93 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 90.92 | |
| d1ne2a_ | 197 | Hypothetical protein Ta1320 {Archaeon Thermoplasma | 90.92 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 90.78 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 90.78 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 90.74 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 90.74 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 90.68 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 90.59 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 90.51 | |
| d1ws6a1 | 171 | Methyltransferase TTHA0928 {Thermus thermophilus [ | 90.37 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 90.35 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 90.34 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 90.31 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 90.31 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 90.2 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 90.12 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 90.1 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 89.97 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 89.81 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 89.73 | |
| d2gh1a1 | 281 | Methyltransferase BC2162 {Bacillus cereus [TaxId: | 89.62 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 89.46 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 89.35 | |
| d1p91a_ | 268 | rRNA methyltransferase RlmA {Escherichia coli [Tax | 89.1 | |
| d1trba1 | 190 | Thioredoxin reductase {Escherichia coli [TaxId: 56 | 89.01 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 88.99 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 88.92 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 88.84 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 88.82 | |
| d1y7la1 | 310 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 88.69 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 88.56 | |
| d1h6da1 | 221 | Glucose-fructose oxidoreductase, N-terminal domain | 88.56 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 88.5 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 88.36 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 88.33 | |
| d2ex4a1 | 222 | Adrenal gland protein AD-003 (C9orf32) {Human (Hom | 88.27 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 88.24 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 88.16 | |
| d1gtea3 | 153 | Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su | 88.04 | |
| d1dxla1 | 221 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 87.8 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 87.77 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 87.73 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 87.36 | |
| d2g82a1 | 168 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 87.35 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 87.31 | |
| d1fl2a1 | 184 | Alkyl hydroperoxide reductase subunit F (AhpF), C- | 87.29 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 87.22 | |
| d1jqea_ | 280 | Histamine methyltransferase {Human (Homo sapiens) | 87.2 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 87.19 | |
| d1w4xa1 | 298 | Phenylacetone monooxygenase {Thermobifida fusca [T | 87.15 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 86.85 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 86.71 | |
| d2esra1 | 152 | Putative methyltransferase SPy1538 {Streptococcus | 86.65 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 86.36 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 86.34 | |
| d1xtpa_ | 254 | Hypothetical protein Lmaj004091aaa (LmjF30.0810) { | 86.1 | |
| d1gesa1 | 217 | Glutathione reductase {Escherichia coli [TaxId: 56 | 86.06 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 85.95 | |
| d1lvla1 | 220 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 85.78 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 85.74 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 85.68 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 85.57 | |
| d1z7wa1 | 320 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 85.57 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 85.25 | |
| d1ebda1 | 223 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 85.25 | |
| d1rp0a1 | 278 | Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara | 85.25 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 85.18 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 85.17 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 85.03 | |
| d1fcja_ | 302 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 84.98 | |
| d1v59a1 | 233 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 84.93 | |
| d2p7ia1 | 225 | Hypothetical protein ECA1738 {Erwinia carotovora [ | 84.88 | |
| d1ri5a_ | 252 | mRNA cap (Guanine N-7) methyltransferase {Fungus ( | 84.77 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 84.6 | |
| d1ojta1 | 229 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 84.48 | |
| d1pn0a1 | 360 | Phenol hydroxylase {Soil-living yeast (Trichosporo | 84.36 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 84.22 | |
| d2fcaa1 | 204 | tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil | 84.09 | |
| d2dula1 | 375 | N(2),N(2)-dimethylguanosine tRNA methyltransferase | 83.92 | |
| d1vdca1 | 192 | Thioredoxin reductase {Mouse-ear cress (Arabidopsi | 83.76 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 83.7 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 83.61 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 83.56 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 83.47 | |
| d1y0pa2 | 308 | Flavocytochrome c3 (respiratory fumarate reductase | 83.21 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 83.07 | |
| d3lada1 | 229 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 83.02 | |
| d1dssg1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 82.93 | |
| d1vl6a1 | 222 | Malate oxidoreductase (malic enzyme) {Thermotoga m | 82.85 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 82.81 | |
| d1tdja1 | 331 | Threonine deaminase {Escherichia coli [TaxId: 562] | 82.77 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 82.68 | |
| d3grsa1 | 221 | Glutathione reductase {Human (Homo sapiens) [TaxId | 82.67 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 82.43 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 82.4 | |
| d1hdgo1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 82.29 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 82.24 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 82.16 | |
| d1gado1 | 166 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 82.0 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 81.97 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 81.93 | |
| d1wg8a2 | 182 | TM0872, methyltransferase domain {Thermus thermoph | 81.66 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 81.65 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 81.6 | |
| d1cjca2 | 230 | Adrenodoxin reductase of mitochondrial p450 system | 81.1 | |
| d1tw3a2 | 253 | Carminomycin 4-O-methyltransferase {Streptomyces p | 81.03 | |
| d1m6ia2 | 137 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 80.97 | |
| d1qo8a2 | 317 | Flavocytochrome c3 (respiratory fumarate reductase | 80.67 | |
| d1lqta2 | 239 | Ferredoxin:NADP reductase FprA {Mycobacterium tube | 80.21 | |
| d1h6va1 | 235 | Mammalian thioredoxin reductase {Rat (Rattus norve | 80.11 |
| >d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=1.9e-38 Score=270.43 Aligned_cols=192 Identities=47% Similarity=0.770 Sum_probs=178.6
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
|+||+++++++.|++++++++|+|+++||+|||.++|||++|++.+.|......+|.++|||++|+|+++|++++++++|
T Consensus 8 ~~kAav~~~~~~pl~i~ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~~~~~~p~i~GhE~~G~v~~vG~~v~~~~~G 87 (199)
T d1cdoa1 8 KCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVTEFQPG 87 (199)
T ss_dssp EEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCTTSCSEECCCCEEEEEEEECTTCCSCCTT
T ss_pred EEEEEEEecCCCCcEEEEEECCCCCCCEEEEEEEEEEEecchhhhhhhcccccccccccccccceEEEEEcCCCceecCC
Confidence 47899999999999999999999999999999999999999999999988777899999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|||++.+..+|+.|.+|+.++++.|.+.......+.. ..|..+...+|...+++++.|+|+||++++++.++++|++++
T Consensus 88 drV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~~~iP~~~~ 166 (199)
T d1cdoa1 88 EKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVM-SPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVK 166 (199)
T ss_dssp CEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTT-SCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECCTTSC
T ss_pred CEEEEeeeccccccccccCCCcccccccccccccccc-cCcccceeeccceeecccccCCceEEEEEchHHEEECCCCCC
Confidence 9999999999999999999999999987766555544 667777778899999999999999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEE
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF 193 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~ 193 (371)
++++|++.+++.|++.++......+.|++|||+
T Consensus 167 ~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~ 199 (199)
T d1cdoa1 167 LDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL 199 (199)
T ss_dssp CGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence 999999999999999999888899999999984
|
| >d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=100.00 E-value=2e-37 Score=263.15 Aligned_cols=192 Identities=57% Similarity=0.885 Sum_probs=175.2
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
||||++++++++||+++++|+|+|+++||||||+++|||++|+++++|......+|.++|||++|+|+++|++|+.+++|
T Consensus 6 ~~kAav~~~~g~~l~i~evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~~~~~p~v~GhE~~G~V~~vG~~V~~~~~G 85 (197)
T d2fzwa1 6 KCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKLKAG 85 (197)
T ss_dssp EEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCSCCTT
T ss_pred EEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEecCCCCcHHHHcCCcccccccccCCcceeeEEEeecCCceecCCC
Confidence 59999999999999999999999999999999999999999999999987777899999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|||++.+..+|+.|.+|+.+.+..|.........+.. .+...+...+|..+.++++.|+|+||+++++..++++|++++
T Consensus 86 drV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~-~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~~~~vp~~l~ 164 (197)
T d2fzwa1 86 DTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIK 164 (197)
T ss_dssp CEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCC-TTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTSC
T ss_pred CEEEEccccccccccccccCccccCcccccccccccc-CCccceeccCCcceecccccccceeEEEechHHEEECCCCCC
Confidence 9999999999999999999999999987655444544 566666777888899999999999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEE
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF 193 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~ 193 (371)
+++||.+++++.|++.++.....-+.+++|||+
T Consensus 165 ~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi 197 (197)
T d2fzwa1 165 VDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI 197 (197)
T ss_dssp SGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred HHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence 999999999999999987666666788999884
|
| >d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=100.00 E-value=8.4e-36 Score=252.29 Aligned_cols=189 Identities=28% Similarity=0.523 Sum_probs=158.6
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
+|+|+++.+.+++|+++++|+|+|+++||+|||.+++||++|++.+.|.++. ++|.++|||++|+|+++|+++++|++|
T Consensus 3 ~~~Aav~~~~g~~l~l~~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~~~-~~P~i~GHE~~G~V~~vG~~v~~~~vG 81 (194)
T d1f8fa1 3 DIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPV-PLPAVLGHEGSGIIEAIGPNVTELQVG 81 (194)
T ss_dssp EEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCC-CSSBCCCCEEEEEEEEECTTCCSCCTT
T ss_pred eeEEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEEecCchHhhhhhcccc-cCCcccccceEEEeeecCccceeEccC
Confidence 5899999999999999999999999999999999999999999999998764 589999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccC--CcceeeccCCcceeeeEEecccceEecCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSIN--GKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~--~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
|||+. +..+|+.|.+|++++++.|.+.....+.|.. .+|..+...+ +....++++.|+|+||..++...++++|++
T Consensus 82 DrVv~-~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~-~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~ip~~ 159 (194)
T d1f8fa1 82 DHVVL-SYGYCGKCTQCNTGNPAYCSEFFGRNFSGAD-SEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKD 159 (194)
T ss_dssp CEEEE-CCCCCSSSHHHHTTCGGGCTTHHHHSSSSSC-SSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECTT
T ss_pred ceeee-ecccccCChhhhCCCcccccccccceecccc-ccceeeeecCCceeeccccccccccceeEEEehHHEEECCCC
Confidence 99955 5568999999999999999976544444443 4443332222 344556677789999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEE
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGI 217 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v 217 (371)
++++++ ++|.|+|++|++|+|+++.+|+++|+++
T Consensus 160 i~~~~~-------------------------~~i~g~g~~g~~aiq~a~~~g~~~iiaV 193 (194)
T d1f8fa1 160 FPFDQL-------------------------VKFYAFDEINQAAIDSRKGITLKPIIKI 193 (194)
T ss_dssp CCGGGG-------------------------EEEEEGGGHHHHHHHHHHTSCSEEEEEC
T ss_pred CCcccE-------------------------EEEeCcHHHHHHHHHHHHHcCCCEEEEe
Confidence 886544 3456889999999999999999777765
|
| >d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=100.00 E-value=2.2e-35 Score=252.26 Aligned_cols=190 Identities=45% Similarity=0.797 Sum_probs=165.4
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
||||++++++++|++++++|+|+|+++||||||.++|||++|++.++|.++. .+|.++|||++|+|+++|++++++++|
T Consensus 8 ~~KAaV~~~~g~pl~i~evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~~~-~~P~v~GHE~~G~V~~vG~~V~~~~~G 86 (202)
T d1e3ia1 8 KCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKA-LFPVVLGHECAGIVESVGPGVTNFKPG 86 (202)
T ss_dssp EEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTTSCC-CSSBCCCCEEEEEEEEECTTCCSCCTT
T ss_pred EEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEeccccceeeeeccc-ccccccccccceEEeeecCCceeccCC
Confidence 6999999999999999999999999999999999999999999999998754 589999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCcc---ceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGA---GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 157 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~ 157 (371)
|||++.+...|+.|.+|+.+.++.|.+....... +....++..+...+|...+++++.|+|+||+.+++..++++|+
T Consensus 87 drV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~~v~~~~l~~lP~ 166 (202)
T d1e3ia1 87 DKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDD 166 (202)
T ss_dssp CEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCT
T ss_pred CEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEEEEehhhEEECCC
Confidence 9999999999999999999999999877654221 1112334455666788888999999999999999999999999
Q ss_pred CCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEc
Q 017431 158 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFG 194 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~G 194 (371)
+++++.++.+.+++.+++.++. .+++|++|.|+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~a~~---~~k~G~~V~vi~ 200 (202)
T d1e3ia1 167 EFDLDLLVTHALPFESINDAID---LMKEGKSIRTIL 200 (202)
T ss_dssp TSCGGGGEEEEEEGGGHHHHHH---HHHTTCCSEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHH---hCCCCCEEEEEE
Confidence 9999988888888888877663 256899987753
|
| >d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=100.00 E-value=2.5e-35 Score=246.94 Aligned_cols=170 Identities=24% Similarity=0.417 Sum_probs=150.5
Q ss_pred ceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCC---CCCCCcccccceeEEEEEeCCCCCCCCC
Q 017431 3 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTEVQP 79 (371)
Q Consensus 3 ~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~---~~~~p~v~G~e~~G~V~~~G~~v~~~~~ 79 (371)
.|++++++++ |+++++|+|+|+++|||||+++++||++|++.+++... ..+.|.++|||++|+|+++|+++++|++
T Consensus 3 maAVl~g~~~-l~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~~~~~ 81 (178)
T d1e3ja1 3 LSAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKK 81 (178)
T ss_dssp EEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSCCT
T ss_pred eEEEEEcCCc-EEEEEeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccCCCCC
Confidence 3555678877 99999999999999999999999999999998876432 2267899999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCC
Q 017431 80 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 159 (371)
Q Consensus 80 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~ 159 (371)
||||++.+..+|+.|..|+.++.+.|...... |....+| +|+||+.+|++.++++|+++
T Consensus 82 GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~---~~~~~~G------------------~~aey~~v~~~~~~~iP~~~ 140 (178)
T d1e3ja1 82 GDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFC---ATPPDDG------------------NLARYYVHAADFCHKLPDNC 140 (178)
T ss_dssp TCEEEECCEECCSSSHHHHTTCGGGCTTCEET---TBTTBCC------------------SCBSEEEEEGGGEEECCTTC
T ss_pred CCEEEECcccccCCccccccCCccccccccce---ecccccc------------------ccceeeeecccceeeCCCCC
Confidence 99999999999999999999999999766542 2222344 99999999999999999999
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL 195 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga 195 (371)
++++||.+++++.|||+++ +..++++|++|||+|+
T Consensus 141 ~~~~aa~~~~~~~ta~~a~-~~~~~~~g~~VlVig~ 175 (178)
T d1e3ja1 141 NVKQLVTHSFKLEQTVDAF-EAARKKADNTIKVMIS 175 (178)
T ss_dssp CCGGGEEEEEEGGGHHHHH-HHHHHCCTTCSEEEEE
T ss_pred CHHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEEcc
Confidence 9999999999999999986 6789999999999975
|
| >d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=100.00 E-value=2.9e-35 Score=249.92 Aligned_cols=188 Identities=47% Similarity=0.829 Sum_probs=162.7
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
||||++++++++||+++++|+|+|+++||||||.+++||++|+++++|.++. .+|.++|||++|+|+++|++++++++|
T Consensus 8 ~~KAav~~~~g~~l~i~ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~~~-~~P~i~GHE~~G~Vv~~G~~v~~~~~G 86 (198)
T d1p0fa1 8 TCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPS-KFPVILGHEAVGVVESIGAGVTCVKPG 86 (198)
T ss_dssp EEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCC-CSSBCCCCCEEEEEEEECTTCCSCCTT
T ss_pred EEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEecccceeeeecccc-ccccccceeeeeeeeecCcccccCcCC
Confidence 6999999999999999999999999999999999999999999999998764 689999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|||++.+..+|+.|.+|+.+.++.|+........|.. .++..++...|...+++.+.++|+||+.+++..++++|++++
T Consensus 87 drV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~g~faey~~v~~~~~~kip~~~~ 165 (198)
T d1p0fa1 87 DKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLM-ADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKIN 165 (198)
T ss_dssp CEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSC-TTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEECTTSC
T ss_pred CEEEEEeeccccccccccccccccchhhhcccccccc-CCCceeEeeCCeeccccCCCccceeeEEecHHHEEECCCCCC
Confidence 9999999999999999999999999988776555544 445556666788888899999999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHH
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGL 200 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~ 200 (371)
++.++...+.+. .+.++++|||.|+|++|+
T Consensus 166 ~~~~~~~~~~~~----------~v~~~~~vlv~G~G~iGl 195 (198)
T d1p0fa1 166 VNFLVSTKLTLD----------QINKAFELLSSGQGVRSI 195 (198)
T ss_dssp GGGGEEEEECGG----------GHHHHHHHTTTSSCSEEE
T ss_pred HHHHHHhhcchh----------hcCCCCEEEEECCCcceE
Confidence 776654433322 233445688889888775
|
| >d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=100.00 E-value=3.3e-34 Score=238.05 Aligned_cols=166 Identities=29% Similarity=0.371 Sum_probs=150.4
Q ss_pred ceEEeecCCCCeEEEEeeCCCC-CCCeEEEEEeeeecCccccccccCCCC---CCCCCcccccceeEEEEEeCCCCCCCC
Q 017431 3 KAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 3 ~a~~~~~~~~~~~~~~~~~~~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~---~~~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
||+++.++++||+++++++|++ .++||||||.+++||++|++.+.|.++ ...+|.++|||++|+|+++|+++++++
T Consensus 1 kA~~~~~~g~pl~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~ 80 (171)
T d1h2ba1 1 KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE 80 (171)
T ss_dssp CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCSCC
T ss_pred CEEEEEeCCCCCEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCCcCC
Confidence 7999999999999999999986 689999999999999999999988764 336899999999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||||++.+..+|+.|..|+.+.+++|.+... .|+. .+| +|+||+.++.+.++++|++
T Consensus 81 ~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~---~g~~-~~G------------------~~aey~~v~~~~~~~iP~~ 138 (171)
T d1h2ba1 81 KGDPVILHPAVTDGTCLACRAGEDMHCENLEF---PGLN-IDG------------------GFAEFMRTSHRSVIKLPKD 138 (171)
T ss_dssp TTCEEEECSCBCCSCSHHHHTTCGGGCTTCBC---BTTT-BCC------------------SSBSEEEECGGGEEECCTT
T ss_pred CCCEEEEcCccCCCCccccccccccccccccc---ceee-ccc------------------ccceeeeehhhcceecCCC
Confidence 99999999999999999999999999987664 3433 444 9999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEE
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAV 192 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI 192 (371)
++++.|+++.+++.|||+++ +...+ .|++|||
T Consensus 139 ~~~e~aa~~~~~~~ta~~al-~~~~~-~G~~VlI 170 (171)
T d1h2ba1 139 VRVEVDIHKLDEINDVLERL-EKGEV-LGRAVLI 170 (171)
T ss_dssp CCCCEEEEEGGGHHHHHHHH-HTTCC-SSEEEEE
T ss_pred CCHHHHHHHHhHHHHHHHHH-HhcCC-CCCEEEe
Confidence 99988998889999999987 56777 8999998
|
| >d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=100.00 E-value=1.3e-33 Score=240.46 Aligned_cols=188 Identities=48% Similarity=0.762 Sum_probs=162.3
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
||||++++++++||+++++|+|+|+++||||||.++|||++|++.++|.++. ++|.++|||++|+|+++|++++++++|
T Consensus 8 k~KAavl~~~~~~l~i~ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~~~-~~P~i~GHE~~G~Vv~vG~~v~~~~vG 86 (198)
T d2jhfa1 8 KCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT-PLPVIAGHEAAGIVESIGEGVTTVRPG 86 (198)
T ss_dssp EEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCC-CSSBCCCCSEEEEEEEECTTCCSCCTT
T ss_pred EEEEEEEecCCCCCEEEEEECCCCCCCEEEEEEEEEecccccceeecCCccc-ccceecccceeEEEEecCccccCcCCC
Confidence 5999999999999999999999999999999999999999999999998765 589999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|||++.+..+|+.|.+|+.+..+.|.........|.. .++......+|..++++++.|+|+||+++++.+++++|++++
T Consensus 87 drV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~~~~~~~p~~~~ 165 (198)
T d2jhfa1 87 DKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAFA 165 (198)
T ss_dssp CEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSC-TTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECCTTSC
T ss_pred CEEEEeeeecccccccccCCccceeccccccccCccc-cCccccccccCceeccCCCCCcccCeEEeCHHHeEECCCCCC
Confidence 9999999999999999999999999988776555544 555566667788889999999999999999999999999998
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEE
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF 193 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~ 193 (371)
++.++...+++.+...+ ...+++|++|+|+
T Consensus 166 ~e~l~~~~~~~~~v~~g---~~~l~~G~~VaVi 195 (198)
T d2jhfa1 166 LDPLITHVLPFEKINEG---FDLLRSGESIRTI 195 (198)
T ss_dssp CGGGEEEEEEGGGHHHH---HHHHHTTCCSEEE
T ss_pred HHHHHHHHHHHHhhhhC---CceeeCCCEEEEE
Confidence 87666544444333221 2336788988875
|
| >d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=6.7e-34 Score=237.63 Aligned_cols=169 Identities=30% Similarity=0.416 Sum_probs=149.7
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQP 79 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~~G~~v~~~~~ 79 (371)
||||+++.++++|++++++|+|.|+++||+|||.+++||++|++.++|.++. ..+|.++|||++|+|+++|++++++++
T Consensus 5 tMkA~v~~~~g~pl~l~evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~~~~~~P~i~GhE~~G~V~~~G~~v~~~~~ 84 (175)
T d1llua1 5 TMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGVTRVKE 84 (175)
T ss_dssp EEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCCT
T ss_pred hcEEEEEEeCCCCCEEEEeECCCCCCCEEEEEEEEecCcccchhhhccCccccccCCcCCCCcceEEEEEeCCCcccccc
Confidence 6999999999999999999999999999999999999999999999998764 378999999999999999999999999
Q ss_pred CCEEeecC-CCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 80 GDHVIPCY-QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 80 Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
||||++.+ ...|+.|..|+.+..+.|..... .|+. .+| +|+||+.+++++++++|++
T Consensus 85 GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~---~G~~-~~g------------------g~aey~~v~~~~~~~iPd~ 142 (175)
T d1llua1 85 GDRVGIPWLYTACGCCEHCLTGWETLCESQQN---TGYS-VNG------------------GYAEYVLADPNYVGILPKN 142 (175)
T ss_dssp TCEEEECSEEECCSSSHHHHTTCGGGCTTCEE---BTTT-BCC------------------SSBSEEEECTTTSEECCTT
T ss_pred CCEEEeccccccCCccccccCCcccccccccc---cccc-ccc------------------ccceEEEechHHEEECCCC
Confidence 99998765 44699999999999999987664 3433 444 9999999999999999999
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEE
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF 193 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~ 193 (371)
++++.++++..++.|+++.+ +. +..+|++|||+
T Consensus 143 l~~~~a~~~~~~~~t~~~~~-~~-g~~~G~~VLVl 175 (175)
T d1llua1 143 VKATIHPGKLDDINQILDQM-RA-GQIEGRIVLEM 175 (175)
T ss_dssp CCCCEEEECGGGHHHHHHHH-HT-TCCSSEEEEEC
T ss_pred CChhHHHHHHhHHHHHHHHH-Hh-CCCCCCEEEeC
Confidence 99998888888888888876 33 34579999984
|
| >d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-33 Score=236.86 Aligned_cols=171 Identities=23% Similarity=0.301 Sum_probs=146.8
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCC---CCCCCcccccceeEEEEEeCCCCCCC
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTEV 77 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~---~~~~p~v~G~e~~G~V~~~G~~v~~~ 77 (371)
++.|+++.++++ ++++++|+|+|+++||+|||.+++||++|++.+++... ..++|.++|||++|+|+++|+++++|
T Consensus 7 ~~~a~V~~gp~~-l~l~evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~ 85 (185)
T d1pl8a1 7 NNLSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHL 85 (185)
T ss_dssp CCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCSC
T ss_pred CCEEEEEeCCCe-EEEEEeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEeccceeee
Confidence 368999999987 99999999999999999999999999999999876432 23678999999999999999999999
Q ss_pred CCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCC
Q 017431 78 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 157 (371)
Q Consensus 78 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~ 157 (371)
++||||++.+..+|+.|.+|+.++++.|..... .|....+| +|+||+.++.++++++|+
T Consensus 86 ~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~---~g~~~~~G------------------~~aey~~~~~~~~~~lP~ 144 (185)
T d1pl8a1 86 KPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFF---CATPPDDG------------------NLCRFYKHNAAFCYKLPD 144 (185)
T ss_dssp CTTCEEEECSEECSSCCHHHHTTCGGGCTTCEE---TTBTTBCC------------------SCBSEEEEEGGGEEECCT
T ss_pred cccccceecceeccccchhhccchhchhcccee---eecccccc------------------cceEEEEEchHHEEECCC
Confidence 999999999999999999999999999987654 23222334 999999999999999999
Q ss_pred CCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCCh
Q 017431 158 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGT 197 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~ 197 (371)
++++++|+.++ +.+|++++ +..++++|++||| |+|+
T Consensus 145 ~~~~~~aa~~p--l~~a~~a~-~~~~~~~G~~VlI-g~GP 180 (185)
T d1pl8a1 145 NVKPLVTHRFP--LEKALEAF-ETFKKGLGLKIML-KCDP 180 (185)
T ss_dssp TCGGGEEEEEE--GGGHHHHH-HHHHTTCCSEEEE-ECCT
T ss_pred CCCHHHHHHHH--HHHHHHHH-HHhCCCCCCEEEE-EeCC
Confidence 99999887654 45666664 5677899999998 5543
|
| >d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=100.00 E-value=1.4e-34 Score=240.74 Aligned_cols=170 Identities=21% Similarity=0.195 Sum_probs=142.8
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 81 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd 81 (371)
|||+++.++++ ++++++|.|.|+++||+||+++++||++|++.+.+.....++|.++|||++|+|+++|+++++|++||
T Consensus 1 MKa~v~~~~~~-l~i~e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~~~~~~P~i~GhE~~G~V~~vG~~v~~~~vGd 79 (177)
T d1jqba1 1 MKGFAMLGINK-LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKPGD 79 (177)
T ss_dssp CEEEEEEETTE-EEEEECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCTTCCCSSEECCCCEEEEEEEECTTCCSCCTTC
T ss_pred CeEEEEEeCCC-eEEEEeeCCCCCCCEEEEEEEEEecCCCcccccccCCCCCCCCccCcceeeEEeeecccccceecCCC
Confidence 89999999998 99999999999999999999999999999988876666667899999999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecc--cceEecCCCC
Q 017431 82 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD--VSVAKIDPQA 159 (371)
Q Consensus 82 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~--~~v~~lP~~~ 159 (371)
||++.+..+|+.|.+|+.+.++.|........+|.. .+| +|+||+++|. .+++++|+++
T Consensus 80 rV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~-~~G------------------~~aEy~~vp~a~~~l~~iP~~~ 140 (177)
T d1jqba1 80 RVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNF-KDG------------------VFGEYFHVNDADMNLAILPKDV 140 (177)
T ss_dssp EEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTT-BCC------------------SSBSSEEESSHHHHCEECCTTS
T ss_pred cEEEeeeeccccccchhhhhhcccccccccccccCC-CCh------------------hcCeeEEEEhhhCeEEECCCCc
Confidence 999999999999999999999999987654444432 344 9999999986 4799999999
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHH
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAV 202 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~a 202 (371)
++++++.... +++..+ ++.+||+|+|++|+.+
T Consensus 141 ~~~~~~~~~~---~~~~~~--------~~~vlv~g~gp~gl~a 172 (177)
T d1jqba1 141 DLSKLVTHVY---HGFDHI--------EEALLLMKDKPKDLIK 172 (177)
T ss_dssp CGGGGEEEEE---ESGGGH--------HHHHHHHHHCCTTCSE
T ss_pred chHHHHHHHH---HHHHHh--------cCceEEECCCHHHhhe
Confidence 9877654332 222222 3457777888877654
|
| >d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=99.98 E-value=6.1e-33 Score=231.88 Aligned_cols=172 Identities=25% Similarity=0.383 Sum_probs=143.5
Q ss_pred CcceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCC-----
Q 017431 1 MCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVT----- 75 (371)
Q Consensus 1 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~----- 75 (371)
+|||+++.++++|++++++|+|+|+++||||||.++|||++|+++++|.++..++|.++|||++|+|+++|++++
T Consensus 4 k~kA~v~~~~~~pl~i~ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~~~~~P~vlGHE~~G~V~~vG~~v~~~~~~ 83 (184)
T d1vj0a1 4 KAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKRDLNGE 83 (184)
T ss_dssp EEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEESSCCBCTTSC
T ss_pred eEEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEECCCCCchhheeccCCccccccccceeeeeeeeEEeccccccccc
Confidence 489999999999999999999999999999999999999999999999988778999999999999999999986
Q ss_pred CCCCCCEEeecCCCCCCCCccccCCCC-cccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEec-ccceE
Q 017431 76 EVQPGDHVIPCYQAECRECKFCKSGKT-NLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVH-DVSVA 153 (371)
Q Consensus 76 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~-~~~v~ 153 (371)
.+++||+|++.+..+|+.|.+|+.+.+ +.|.+.... |+. + .......-.|+|+||+.++ +.+++
T Consensus 84 ~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~---G~~---~--------~~~~~~~~~Gg~ae~~~v~~~~~v~ 149 (184)
T d1vj0a1 84 LLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVY---GIN---R--------GCSEYPHLRGCYSSHIVLDPETDVL 149 (184)
T ss_dssp BCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEET---TTT---C--------CSSSTTCCCSSSBSEEEECTTCCEE
T ss_pred cccceeeeEeccccccccChhHhCccccccCCCceee---ccC---C--------CCCCCCCcceeCcCcEEechhHcEE
Confidence 468999999999999999999999986 467765532 211 0 0000001124999999996 57999
Q ss_pred ecCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEE
Q 017431 154 KIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF 193 (371)
Q Consensus 154 ~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~ 193 (371)
++|++++.++ ++.+|++++ +.+++++|++|||+
T Consensus 150 ~ip~~l~~~~------pl~~A~~a~-~~~~~~~G~~VlI~ 182 (184)
T d1vj0a1 150 KVSEKITHRL------PLKEANKAL-ELMESREALKVILY 182 (184)
T ss_dssp EECTTCCEEE------EGGGHHHHH-HHHHHTSCSCEEEE
T ss_pred ECCCCCCHHH------HHHHHHHHH-HHhCCCcCCEEEEe
Confidence 9999999753 355677776 77889999999996
|
| >d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=99.98 E-value=4.1e-35 Score=249.06 Aligned_cols=191 Identities=21% Similarity=0.283 Sum_probs=156.6
Q ss_pred cceEEeecCCCCeEEEEeeCCCC-------CCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPP-------QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGV 74 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~-------~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v 74 (371)
+||+++++++. ++++++|.|++ .++||+|||.+++||++|++.++|.++. ++|.++|||++|+|+++|++|
T Consensus 2 ~kA~v~~~~~~-le~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~~-~~P~v~GHE~~G~Vv~vG~~V 79 (201)
T d1kola1 2 NRGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTA-QVGLVLGHEITGEVIEKGRDV 79 (201)
T ss_dssp EEEEEEEETTE-EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSCC-CTTCBCCCCEEEEEEEECTTC
T ss_pred cEEEEEeCCCc-eEEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCccc-ccceeccceeeeeeecccccc
Confidence 58999999998 99999999975 3599999999999999999999998764 689999999999999999999
Q ss_pred CCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecc--cce
Q 017431 75 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD--VSV 152 (371)
Q Consensus 75 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~--~~v 152 (371)
++|++||||++.+..+|+.|++|+.++++.|.........|...... . .+. .|+|+||+++|. .++
T Consensus 80 ~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~---~-------~~~--~Gg~aeyv~vp~~~~~l 147 (201)
T d1kola1 80 ENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVD---M-------GDW--TGGQAEYVLVPYADFNL 147 (201)
T ss_dssp CSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTT---S-------CCB--CCCSBSEEEESSHHHHC
T ss_pred ccccccceeEEeeeeeccCChhhhCCCcccccccccccccccccccC---C-------Ccc--ccccccEEEeehHHCeE
Confidence 99999999999999999999999999999998776543333210000 0 001 249999999985 479
Q ss_pred EecCCCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC
Q 017431 153 AKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA 211 (371)
Q Consensus 153 ~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~ 211 (371)
++||++.++.+++.+..++.++++++ ...+.+.+ ++|+|++|++++|+||++|+
T Consensus 148 ~~iPd~~~~~~~~~~~~~~~~~~~a~-~~~~~~~g----~~g~G~vG~~~i~~ak~~GA 201 (201)
T d1kola1 148 LKLPDRDKAMEKINIAEVVGVQVISL-DDAPRGYG----EFDAGVPKKFVIDPHKTFSA 201 (201)
T ss_dssp EECSCHHHHHHTCCHHHHHTEEEECG-GGHHHHHH----HHHHTCSCEEEECTTCSSCC
T ss_pred EECCCCCChHHHHHHHHHHHHHHHHH-HhCCCCCe----EEeeCHHHHHHHHHHHHcCC
Confidence 99999877777777777788888875 33444444 35999999999999999886
|
| >d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.98 E-value=1.6e-32 Score=231.30 Aligned_cols=177 Identities=19% Similarity=0.259 Sum_probs=148.7
Q ss_pred CcceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCC-CCC
Q 017431 1 MCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGV-TEV 77 (371)
Q Consensus 1 ~~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v-~~~ 77 (371)
||||+++.++++. +++.+.+.+++.++||||||.++|||++|++.+.|.++..++|.++|||++|+|+++|+++ +.+
T Consensus 6 ~~ka~~~~~~~~~~~~~~~~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~~~~~P~i~GHE~~G~Vv~vG~~v~~~~ 85 (192)
T d1piwa1 6 KFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSNSGL 85 (192)
T ss_dssp CEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTTCCSSC
T ss_pred eeEEEEEeCCCcCCcceEeeccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCCCCCCCcCcccccccchhhccccccccc
Confidence 6899999988765 7888888778899999999999999999999999998888899999999999999999988 569
Q ss_pred CCCCEEeecCC-CCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecC
Q 017431 78 QPGDHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 156 (371)
Q Consensus 78 ~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP 156 (371)
++||||.+.+. ..|+.|.+|+.++.+.|.+........ ..+| ....|+|+||+++++..++++|
T Consensus 86 k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~--~~~G-------------~~~~Ggfaey~~v~~~~~~~iP 150 (192)
T d1piwa1 86 KVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQP--YEDG-------------YVSQGGYANYVRVHEHFVVPIP 150 (192)
T ss_dssp CTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCB--CTTS-------------CBCCCSSBSEEEEEGGGEEECC
T ss_pred CCCCeeeEeeeccCCCCchhhhcCCcccccccccccccc--cccc-------------cccccceeeEEEeehHHeEECC
Confidence 99999987764 469999999999999998775431110 0111 2223599999999999999999
Q ss_pred CCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEE
Q 017431 157 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF 193 (371)
Q Consensus 157 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~ 193 (371)
++++++.|+.+...+.|||+++ +.+++++|++|||.
T Consensus 151 ~~l~~e~Aal~~~~~~ta~~~l-~~~~vk~g~~Vvv~ 186 (192)
T d1piwa1 151 ENIWVETLPVGEAGVHEAFERM-EKGDVRYRFTLVGY 186 (192)
T ss_dssp TTCCEEEEESSHHHHHHHHHHH-HHTCCSSEEEEECC
T ss_pred CCCCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEE
Confidence 9999988776665577999987 67899999999974
|
| >d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=99.98 E-value=1.8e-32 Score=229.31 Aligned_cols=166 Identities=25% Similarity=0.391 Sum_probs=140.6
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCC--------CCCCCcccccceeEEEEEeCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP--------EGLFPCILGHEAAGIVESVGEG 73 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~--------~~~~p~v~G~e~~G~V~~~G~~ 73 (371)
|||+++.++|+||+++++|.|+|+++||+|||.+++||++|++.++|.++ ..++|.++|||++|+|+++|++
T Consensus 1 MKA~~~~~~G~pl~i~dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~g~~ 80 (177)
T d1jvba1 1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE 80 (177)
T ss_dssp CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred CeEEEEEeCCCCCEEEEeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeeeccC
Confidence 89999999999999999999999999999999999999999999998653 2368999999999999999999
Q ss_pred CCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccc-e
Q 017431 74 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS-V 152 (371)
Q Consensus 74 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~-v 152 (371)
++++++||||++.+...|+.|..|+.++++.|.+... +|+. .+| +|+||+.++... +
T Consensus 81 v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~---~g~~-~~G------------------~~aey~~vp~~~~~ 138 (177)
T d1jvba1 81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRW---LGIN-FDG------------------AYAEYVIVPHYKYM 138 (177)
T ss_dssp CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEE---BTTT-BCC------------------SSBSEEEESCGGGE
T ss_pred ccccccCceEeeeeccccccccccccccccccCCcce---eeec-ccc------------------ccccEEEEEhHHeE
Confidence 9999999999999999999999999999999987754 3433 444 999999997755 5
Q ss_pred EecCCCCCcchhhhc-cccchhhhhhhhhcCCCCCCCEEEE
Q 017431 153 AKIDPQAPLDKVCLL-GCGVPTGLGAVWNTAKVEPGSIVAV 192 (371)
Q Consensus 153 ~~lP~~~~~~~aa~~-~~~~~ta~~~l~~~~~~~~g~~VlI 192 (371)
+++|+ +++.++|++ ..++.++++++ ...++ .|++|||
T Consensus 139 ~~~~~-~~~~~~a~~~~~~~~~a~~~~-~~~~~-~G~~VlI 176 (177)
T d1jvba1 139 YKLRR-VKPMITKTMKLEEANEAIDNL-ENFKA-IGRQVLI 176 (177)
T ss_dssp EECSS-SCCCCEEEEEGGGHHHHHHHH-HTTCC-CSEEEEE
T ss_pred EECCC-CChHHHHHHHHHHHHHHHHHH-Hhhcc-cCCceEC
Confidence 55555 444555544 55788888876 44444 5899987
|
| >d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.97 E-value=7.7e-32 Score=224.30 Aligned_cols=168 Identities=30% Similarity=0.472 Sum_probs=142.0
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCC-CCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD-PEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~-~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
|||++++++++|++++++|.|+|.++||||||++++||++|++.+++.. ....+|.++|||++|+|+++|++++++++|
T Consensus 1 MkA~v~~~~g~pl~i~~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~p~v~GhE~~G~Vv~vG~~v~~~~vG 80 (171)
T d1rjwa1 1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVG 80 (171)
T ss_dssp CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred CeEEEEecCCCCcEEEEeECCCCCCCeEEEEEEEeeccccceeeeecccccccccccccCCEEEEEEEEecccccCceee
Confidence 8999999999999999999999999999999999999999999887654 444789999999999999999999999999
Q ss_pred CEEeecCC-CCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCC
Q 017431 81 DHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 159 (371)
Q Consensus 81 d~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~ 159 (371)
|||++.+. ..|+.|..|..+..+.|..... .|.. .+| +|+||+.+++++++++|+++
T Consensus 81 drV~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~-~~G------------------~~aey~~v~~~~~~~iP~~~ 138 (171)
T d1rjwa1 81 DRVGIPWLYSACGHCDYCLSGQETLCEHQKN---AGYS-VDG------------------GYAEYCRAAADYVVKIPDNT 138 (171)
T ss_dssp CEEEECSEEECCSCSHHHHTTCGGGCTTCEE---BTTT-BCC------------------SSBSEEEEEGGGCEECCTTC
T ss_pred eEEeeccccccccccccccCCCccccccccc---ccee-ccC------------------ccccceEecHHHEEECCCCC
Confidence 99987664 4578899999999999987653 3333 344 99999999999999999999
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL 195 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga 195 (371)
+++.|++ . .+.++++++. .+.+ +|++|||+|.
T Consensus 139 ~~e~A~l-~-~~~~~~~~~~-~~~~-~G~tVlViG~ 170 (171)
T d1rjwa1 139 IIEVQPL-E-KINEVFDRML-KGQI-NGRVVLTLED 170 (171)
T ss_dssp CEEEEEG-G-GHHHHHHHHH-TTCC-SSEEEEECCC
T ss_pred CHHHHHH-H-HHHHHHHHHH-hcCC-CCCEEEEeCC
Confidence 9876653 3 4556776653 3444 5999999873
|
| >d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.2e-30 Score=211.47 Aligned_cols=145 Identities=20% Similarity=0.312 Sum_probs=132.3
Q ss_pred CcceEEeecCCCC--eEEE-EeeCCCCCCCeEEEEEeeeecCccccccccCCCCCC-CCCcccccceeEEEEEeCCCCCC
Q 017431 1 MCKAAVAWEPNKP--LVIE-DVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVTE 76 (371)
Q Consensus 1 ~~~a~~~~~~~~~--~~~~-~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~-~~p~v~G~e~~G~V~~~G~~v~~ 76 (371)
+|||+++.++|+| +++. ++|.|+|+++||+|||+++++|++|++.+.|..+.. .+|.++|||++|+|+++|+++++
T Consensus 2 ~MkAv~~~~~G~p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~~vG~~v~~ 81 (150)
T d1yb5a1 2 LMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASA 81 (150)
T ss_dssp EEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTCTT
T ss_pred ceeEEEEEccCCcceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcCccccccccCccceeeeeEeecceeec
Confidence 5999999999987 8876 689999999999999999999999999999877654 68899999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecC
Q 017431 77 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 156 (371)
Q Consensus 77 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP 156 (371)
|++||||+..+. .+| +|+||+.++++.++++|
T Consensus 82 ~~vGdrV~~~~~------------------------------~~G------------------~~ae~~~v~~~~~~~iP 113 (150)
T d1yb5a1 82 FKKGDRVFTSST------------------------------ISG------------------GYAEYALAADHTVYKLP 113 (150)
T ss_dssp CCTTCEEEESCC------------------------------SSC------------------SSBSEEEEEGGGEEECC
T ss_pred cccCcccccccc------------------------------ccc------------------ccccccccccccccccc
Confidence 999999975432 233 99999999999999999
Q ss_pred CCCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEE
Q 017431 157 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF 193 (371)
Q Consensus 157 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~ 193 (371)
+++++++||+++++..|+|+++...+....|+++||+
T Consensus 114 ~~ls~~~Aa~~~~~~~ta~~~~~~~g~~~~G~~vliL 150 (150)
T d1yb5a1 114 EKLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL 150 (150)
T ss_dssp TTCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred CCCCHHHHHHhhhhhhhehhhheEEcCcccCCEEEEC
Confidence 9999999999999999999999999999999999984
|
| >d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=8.7e-31 Score=218.24 Aligned_cols=160 Identities=26% Similarity=0.420 Sum_probs=131.5
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 81 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~Gd 81 (371)
|||++.+++++||+++++|.|+|.++||||||.+++||++|++.+.|.+....+|.++|||++|+|+++|++++++++||
T Consensus 1 m~a~~~~~~~~pl~i~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~~~~~P~i~GhE~~G~V~~vG~~V~~~~vGd 80 (179)
T d1uufa1 1 IKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGD 80 (179)
T ss_dssp CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCSCCTTC
T ss_pred CeEEEEccCCCCCEEEEecCCCCCCCEEEEEEEEECCCCCcceeeeeeeccccccccccccccccchhhccccccCCCCC
Confidence 89999999999999999999999999999999999999999999999888778999999999999999999999999999
Q ss_pred EEeecC-CCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 82 HVIPCY-QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 82 ~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
||.+.+ ..+|++|.+|+.++++.|.+.... +.+.....+ ....|+|+||+.+++++++++|+...
T Consensus 81 rV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~-~~~~~~~~~-------------~~~~GgfaEy~~v~~~~~~~ip~~~~ 146 (179)
T d1uufa1 81 LVGVGCIVDSCKHCEECEDGLENYCDHMTGT-YNSPTPDEP-------------GHTLGGYSQQIVVHERYVLRIRVADI 146 (179)
T ss_dssp EEEECSEEECCSSSHHHHTTCGGGCTTCEET-TTSBCSSTT-------------SBCCCSSBSEEEEEGGGCEECCCCCE
T ss_pred EEEEcccccccCccccccCcccccCCCcccc-ccccCCCCC-------------cccccccceEEEechHHEEECCCCCc
Confidence 998776 457999999999999999876532 111110000 11135999999999999999996643
Q ss_pred cchhhhccccchhhhhhh
Q 017431 161 LDKVCLLGCGVPTGLGAV 178 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l 178 (371)
...++ .++.++++++
T Consensus 147 ~~~~a---~~l~~a~~a~ 161 (179)
T d1uufa1 147 EMIRA---DQINEAYERM 161 (179)
T ss_dssp EEECG---GGHHHHHHHH
T ss_pred ChhHh---chhHHHHHHH
Confidence 32221 2455677765
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=99.96 E-value=1.8e-28 Score=204.23 Aligned_cols=173 Identities=30% Similarity=0.517 Sum_probs=155.7
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
++++.|+.++|++.|||+++++..++++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|+++++++
T Consensus 1 vP~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~ 80 (174)
T d1f8fa2 1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINS 80 (174)
T ss_dssp SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEET
T ss_pred CCHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeC
Confidence 35678999999999999999999999999999999999999999999999999888899999999999999999999998
Q ss_pred CCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheee-ceEEEeeecCCC
Q 017431 239 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGF 317 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~ 317 (371)
++ .++.+.+++.+++++|++|||+|++.+++.+++.++++ |+++.+|........+++...++. ++++.|+..+.+
T Consensus 81 ~~--~~~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~-G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~g~~ 157 (174)
T d1f8fa2 81 KT--QDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSG 157 (174)
T ss_dssp TT--SCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEE-EEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGGS
T ss_pred CC--cCHHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCc-eEEEEEeecCCCcccccCHHHHHHCCCEEEEEEecCC
Confidence 87 77899999999889999999999999999999999996 999999976555566777666554 999999988777
Q ss_pred cccCcHHHHHHHHHcCC
Q 017431 318 KSRSQVPWLVDKYMKKE 334 (371)
Q Consensus 318 ~~~~~~~~~~~~~~~~~ 334 (371)
..+++++++++++++|+
T Consensus 158 ~~~~~~~~~~~l~~~Gk 174 (174)
T d1f8fa2 158 SPKKFIPELVRLYQQGK 174 (174)
T ss_dssp CHHHHHHHHHHHHHTTS
T ss_pred ChHHHHHHHHHHHHcCC
Confidence 66678999999999875
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=99.95 E-value=6.6e-28 Score=200.43 Aligned_cols=174 Identities=50% Similarity=0.857 Sum_probs=150.7
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCC
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 239 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~ 239 (371)
+|.+||.+.|++.|+|+++.+.+++++|++|||+|+|++|++++|+|+++|+++|++++++++|+++++++|+++++|+.
T Consensus 1 ~P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~ 80 (174)
T d1p0fa2 1 APLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPK 80 (174)
T ss_dssp CCGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCC
Confidence 35789999999999999998999999999999999999999999999999998999999999999999999999999987
Q ss_pred CCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCCcc
Q 017431 240 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS 319 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 319 (371)
+.+....+..+..+++++|++||++|++.+++.++..+.++.|+++.+|....+..+++++..+.+++++.|+.++++.
T Consensus 81 ~~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~- 159 (174)
T d1p0fa2 81 DYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFK- 159 (174)
T ss_dssp GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTCEEEECSGGGCC-
T ss_pred CchhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccccccCHHHHhCCCEEEEEEeCCCC-
Confidence 7444455555556556999999999999999999998877448999999876666777777766678899999887654
Q ss_pred cCcHHHHHHHHHcCC
Q 017431 320 RSQVPWLVDKYMKKE 334 (371)
Q Consensus 320 ~~~~~~~~~~~~~~~ 334 (371)
.++++++++++.+||
T Consensus 160 ~~d~~~lidl~~~gK 174 (174)
T d1p0fa2 160 GEEVSRLVDDYMKKK 174 (174)
T ss_dssp GGGHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHcCC
Confidence 358999999998875
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=99.95 E-value=8.5e-28 Score=199.43 Aligned_cols=173 Identities=49% Similarity=0.921 Sum_probs=149.1
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCC
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 239 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~ 239 (371)
+++.||.++|++.|+|+++.+.+++++|++|||+|+|++|++++|+++++|+++|++++.+++|+++++++|+++++++.
T Consensus 2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~ 81 (174)
T d1e3ia2 2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPR 81 (174)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCc
Confidence 46789999999999999998999999999999999999999999999999998999999999999999999999999876
Q ss_pred CCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCCcc
Q 017431 240 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS 319 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 319 (371)
+.+.......+..+++|+|++|||+|++.+++.++++++++.|+++.+|... ...++++..+..++++.|+..+++..
T Consensus 82 ~~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~--~~~~i~~~~~~~~k~i~Gs~~Gs~~~ 159 (174)
T d1e3ia2 82 ELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKV--DEMTIPTVDVILGRSINGTFFGGWKS 159 (174)
T ss_dssp GCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSS--SEEEEEHHHHHTTCEEEECSGGGCCH
T ss_pred cchhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCC--CccccchHHHhccCEEEEEEeeCCCh
Confidence 5434444444444445999999999999999999999998339999999854 45566666666678999999888877
Q ss_pred cCcHHHHHHHHHcCC
Q 017431 320 RSQVPWLVDKYMKKE 334 (371)
Q Consensus 320 ~~~~~~~~~~~~~~~ 334 (371)
.++++++++++.+||
T Consensus 160 ~~d~p~li~l~~~GK 174 (174)
T d1e3ia2 160 VDSVPNLVSDYKNKK 174 (174)
T ss_dssp HHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHCcC
Confidence 789999999998875
|
| >d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=99.95 E-value=7.1e-28 Score=194.67 Aligned_cols=141 Identities=22% Similarity=0.290 Sum_probs=123.4
Q ss_pred ceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 3 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 3 ~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
+.+.+.++|+| |++++.|.|+|+++||+|||+++++|++|++.++|.++...+|.++|||++|+|+++|+++++|++|
T Consensus 2 ~~i~~~~~G~pe~l~~~e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vG 81 (147)
T d1qora1 2 TRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKAG 81 (147)
T ss_dssp EEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred eEEEEcccCCCceeEEEEecCCCCCCCEEEEEEEEecccceeeeeecCCCCCCcceeeeccccccceeeeeeeccccccc
Confidence 56788999988 9999999999999999999999999999999999998888899999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|||+.... . .|+|++|+.++.+.++++|++++
T Consensus 82 drV~~~~~------------------------------~------------------~G~~ae~~~v~~~~~~~~P~~~~ 113 (147)
T d1qora1 82 DRVVYAQS------------------------------A------------------LGAYSSVHNIIADKAAILPAAIK 113 (147)
T ss_dssp CEEEESCC------------------------------S------------------SCCSBSEEEEEGGGEEECCTTSC
T ss_pred ceeeeecc------------------------------c------------------cccceeEEEEehHHeEEcCcccc
Confidence 99963211 1 23999999999999999999998
Q ss_pred cchhh--hccccchhhhhhhhhcCCCCCCCEEEE
Q 017431 161 LDKVC--LLGCGVPTGLGAVWNTAKVEPGSIVAV 192 (371)
Q Consensus 161 ~~~aa--~~~~~~~ta~~~l~~~~~~~~g~~VlI 192 (371)
+++|+ ++++...++++++.+ .++++|++|||
T Consensus 114 ~~~a~a~~~~~~~~~~~~~l~~-~~~~~G~~VLI 146 (147)
T d1qora1 114 VDVAEQQKYPLKDAQRAHEILE-SRATQGSSLLI 146 (147)
T ss_dssp CCCCGGGEEEGGGHHHHHHHHH-TTCCCBCCEEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEe
Confidence 87654 456666777777754 67999999998
|
| >d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=99.95 E-value=5.8e-28 Score=190.28 Aligned_cols=130 Identities=18% Similarity=0.207 Sum_probs=117.9
Q ss_pred cceEEeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCC-CCCcccccceeEEEEEeCCCCCCCCCC
Q 017431 2 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVTEVQPG 80 (371)
Q Consensus 2 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~-~~p~v~G~e~~G~V~~~G~~v~~~~~G 80 (371)
|||+++.++|+++++++++.|.|.++||+||+++++||++|++.++|.++.. .+|.++|||++|+| +|
T Consensus 1 MkA~~~~~~G~~l~~~e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~~~~~~P~v~G~E~~G~V-----------vG 69 (131)
T d1iz0a1 1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVV-----------EG 69 (131)
T ss_dssp CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEE-----------TT
T ss_pred CcEEEEccCCCCCEEEEccCCCCCCCEEEEEEEEEeccccccccccccccccccceeEeeeeeEEee-----------cc
Confidence 8999999999999999999999999999999999999999999999987654 78999999999999 49
Q ss_pred CEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCCCC
Q 017431 81 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 160 (371)
Q Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~~~ 160 (371)
|||+... .+| +|+||+.++++.++++|++++
T Consensus 70 d~V~~~~-------------------------------~~G------------------~~aey~~v~~~~~~~~P~~~~ 100 (131)
T d1iz0a1 70 RRYAALV-------------------------------PQG------------------GLAERVAVPKGALLPLPEGRP 100 (131)
T ss_dssp EEEEEEC-------------------------------SSC------------------CSBSEEEEEGGGCEECCTTCC
T ss_pred ceEEEEe-------------------------------ccC------------------ccceeeeeCHHHeEEccCCCC
Confidence 9997432 233 999999999999999999999
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEE
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF 193 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~ 193 (371)
+++||++++++.|||++|++.+ +.|++||++
T Consensus 101 ~~~aa~~~~~~~Ta~~al~~~g--~~g~tvl~l 131 (131)
T d1iz0a1 101 VVGPVFPFAEAEAAFRALLDRG--HTGKVVVRL 131 (131)
T ss_dssp CEEEEEEGGGHHHHHHHTTCTT--CCBEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHhcc--cCCCEEEEC
Confidence 9999999999999999997766 459999873
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=99.94 E-value=1e-26 Score=194.00 Aligned_cols=174 Identities=69% Similarity=1.139 Sum_probs=147.5
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCC
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 239 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~ 239 (371)
++++||.++|++.|+|+++.+.+++++|++|||+|+|++|++++|+++++|+++|++++++++|+++++++|+++++++.
T Consensus 2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~ 81 (176)
T d2fzwa2 2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQ 81 (176)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCC
Confidence 56889999999999999998999999999999999999999999999999998999999999999999999999999987
Q ss_pred CCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCC-CcccccchheeeceEEEeeecCCCc
Q 017431 240 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG-QEISTRPFQLVTGRVWKGTAFGGFK 318 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~ 318 (371)
+......+.+++.+++++|++||++|++.+++.+..+++++ |+++.++..... ......+..+.+++++.|+.++++.
T Consensus 82 ~~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g-~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~ 160 (176)
T d2fzwa2 82 DFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG-WGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWK 160 (176)
T ss_dssp GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTT-TCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCC
T ss_pred chhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCC-ceeEEEEeeccccccccccHHHHHCCCEEEEEeeeCCc
Confidence 64455556666666669999999999999889999999886 888877544332 3333344445568899999988877
Q ss_pred ccCcHHHHHHHHHcCC
Q 017431 319 SRSQVPWLVDKYMKKE 334 (371)
Q Consensus 319 ~~~~~~~~~~~~~~~~ 334 (371)
.+++++++++++++||
T Consensus 161 ~~~d~~~li~l~~~GK 176 (176)
T d2fzwa2 161 SVESVPKLVSEYMSKK 176 (176)
T ss_dssp HHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHcCC
Confidence 7788999999998875
|
| >d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.94 E-value=1.2e-27 Score=194.37 Aligned_cols=147 Identities=15% Similarity=0.176 Sum_probs=124.8
Q ss_pred CcceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCC-CCCcccccceeEEEEEeCCCCCCC
Q 017431 1 MCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVTEV 77 (371)
Q Consensus 1 ~~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~-~~p~v~G~e~~G~V~~~G~~v~~~ 77 (371)
||||+++.+++++ ++++++|+|+|++|||||||+++|||++|++.+.|.++.. ..|.++|+|++|+|++. .++.+
T Consensus 3 ~~KA~v~~~~~~~~~~~i~~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~~~~~~p~v~g~e~~G~v~~~--~~~~~ 80 (152)
T d1xa0a1 3 AFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVSS--QHPRF 80 (152)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEEC--CSSSC
T ss_pred ceEEEEEEecCCceEEEEEEccCCCCCCCEEEEEEEEeCCChHHHHHHhhcccccccccceeeeeeeeeeecc--CCCcc
Confidence 5899999999987 5688999999999999999999999999999998877644 68999999999999994 45789
Q ss_pred CCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCC
Q 017431 78 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 157 (371)
Q Consensus 78 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~ 157 (371)
++||+|+..... .+.. ++ |+|+||+.++++.++++|+
T Consensus 81 ~~g~~v~~~~~~------------------------~~~~-~~------------------G~~aEy~~v~~~~~~~iP~ 117 (152)
T d1xa0a1 81 REGDEVIATGYE------------------------IGVT-HF------------------GGYSEYARLHGEWLVPLPK 117 (152)
T ss_dssp CTTCEEEEESTT------------------------BTTT-BC------------------CSSBSEEEECGGGCEECCT
T ss_pred ccCCEEEEecCc------------------------cccc-cC------------------CCcceeeeehhhccccCCC
Confidence 999999744220 0000 23 3999999999999999999
Q ss_pred CCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEc
Q 017431 158 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFG 194 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~G 194 (371)
+++ .+||+++++.+|||.++....+++ |++|||+|
T Consensus 118 ~l~-~~aa~l~~a~~ta~~~~~~~~~~~-G~tVL~l~ 152 (152)
T d1xa0a1 118 GLE-RIAQEISLAELPQALKRILRGELR-GRTVVRLA 152 (152)
T ss_dssp THH-HHEEEEEGGGHHHHHHHHHHTCCC-SEEEEECC
T ss_pred CCC-HHHHHHHHHHHHHHHHHHHhcCCC-CCEEEEcC
Confidence 998 578889999999988888888886 99999975
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=99.94 E-value=5.9e-27 Score=194.50 Aligned_cols=170 Identities=29% Similarity=0.432 Sum_probs=146.2
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
+|+++|+.+++++.|+|+++ +.+++++|++|||+|+|++|++++|+||.+|+++|++++++++|+++++++|+++++++
T Consensus 1 ip~e~A~~l~~~~~ta~~a~-~~a~~~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~ 79 (174)
T d1jqba2 1 MPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNY 79 (174)
T ss_dssp SCHHHHHTTTTHHHHHHHHH-HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECG
T ss_pred CCHHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhHHHHHhhCccccccc
Confidence 47899999999999999986 67899999999999999999999999999999889999999999999999999999999
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhe---eeceEEEeeec
Q 017431 239 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL---VTGRVWKGTAF 314 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~---~~~~~~~g~~~ 314 (371)
++ .++.+.+++.+++ |+|++|||+|++.++++++++++++ |+++.+|.+.....++++...+ .+++++.++..
T Consensus 80 ~~--~~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~ 156 (174)
T d1jqba2 80 KN--GHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPG-GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLC 156 (174)
T ss_dssp GG--SCHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCCSSSEEEEETTTTGGGTBCCEEEEBCC
T ss_pred cc--hhHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcC-CEEEEEeecCCCCcCcCcHhHHHHHhCccEEEEecC
Confidence 87 7788999999998 9999999999988899999999996 9999999876555555544432 34678888765
Q ss_pred CCCcccCcHHHHHHHHHcCC
Q 017431 315 GGFKSRSQVPWLVDKYMKKE 334 (371)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~ 334 (371)
+.. +...+.++++++.|+
T Consensus 157 ~~~--r~~~e~l~~li~~gk 174 (174)
T d1jqba2 157 PGG--RLRAERLRDMVVYNR 174 (174)
T ss_dssp CCH--HHHHHHHHHHHHTTS
T ss_pred CCC--cccHHHHHHHHHcCC
Confidence 443 235677888887764
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=99.94 E-value=1.5e-26 Score=192.42 Aligned_cols=172 Identities=49% Similarity=0.886 Sum_probs=150.7
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCC
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 239 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~ 239 (371)
++++||.++|++.|+|+++.+.+++++|++|+|+|+|++|++++|+++++|+.+|++++.+++|+++++++|+++++|+.
T Consensus 3 P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~ 82 (176)
T d1d1ta2 3 PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPK 82 (176)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECcc
Confidence 57899999999999999998999999999999999999999999999999988999999999999999999999999987
Q ss_pred CCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCCc
Q 017431 240 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFK 318 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 318 (371)
+. ....+.+.+.+++ |+|++++++|++.++..++..+.+++|+++.+|....+..+.+++..+.+++++.|+..++..
T Consensus 83 ~~-~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~ 161 (176)
T d1d1ta2 83 DS-TKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLK 161 (176)
T ss_dssp GC-SSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCC
T ss_pred cc-chHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHHHhCCCEEEEEEEeCCC
Confidence 63 3334566666666 999999999998888998888876459999999876666777777777778999999988877
Q ss_pred ccCcHHHHHHHHHc
Q 017431 319 SRSQVPWLVDKYMK 332 (371)
Q Consensus 319 ~~~~~~~~~~~~~~ 332 (371)
.++|++++++++.+
T Consensus 162 ~~~dip~li~~~~~ 175 (176)
T d1d1ta2 162 SRDDVPKLVTEFLA 175 (176)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHhC
Confidence 77899999988754
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=8.9e-27 Score=193.98 Aligned_cols=166 Identities=20% Similarity=0.257 Sum_probs=143.9
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
+|+++||+++++++|||++|++..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++++|+++++|
T Consensus 1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~vi~ 79 (174)
T d1yb5a2 1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFN 79 (174)
T ss_dssp SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCc-ccccccccccccccccccCcccccc
Confidence 5789999999999999999999999999999999987 9999999999999999 8999989999999999999999999
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecC
Q 017431 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFG 315 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~ 315 (371)
+++ .++.+.+++.+++ ++|++||++|+ ..++.++++++++ |+++.+|... ..++++..+. +++++.|+.+.
T Consensus 80 ~~~--~~~~~~i~~~t~~~g~d~v~d~~g~-~~~~~~~~~l~~~-G~iv~~G~~~---~~~~~~~~~~~k~~~i~g~~~~ 152 (174)
T d1yb5a2 80 HRE--VNYIDKIKKYVGEKGIDIIIEMLAN-VNLSKDLSLLSHG-GRVIVVGSRG---TIEINPRDTMAKESSIIGVTLF 152 (174)
T ss_dssp TTS--TTHHHHHHHHHCTTCEEEEEESCHH-HHHHHHHHHEEEE-EEEEECCCCS---CEEECTHHHHTTTCEEEECCGG
T ss_pred ccc--ccHHHHhhhhhccCCceEEeecccH-HHHHHHHhccCCC-CEEEEEecCC---CCCCCHHHHHHCCCEEEEEEec
Confidence 988 7899999999998 99999999997 5699999999996 9999998642 3455555544 48999998765
Q ss_pred CCcccCcHHHHHHHHHcC
Q 017431 316 GFKSRSQVPWLVDKYMKK 333 (371)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~ 333 (371)
.. .++++++++++++++
T Consensus 153 ~~-~~~~~~~~~~~l~~g 169 (174)
T d1yb5a2 153 SS-TKEEFQQYAAALQAG 169 (174)
T ss_dssp GC-CHHHHHHHHHHHHHH
T ss_pred CC-CHHHHHHHHHHHHHH
Confidence 43 345677777777553
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.94 E-value=7.6e-27 Score=196.12 Aligned_cols=174 Identities=18% Similarity=0.267 Sum_probs=145.3
Q ss_pred chhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 162 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 162 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
+|||+++++++|||+++++..++++|++|||+|+ |++|++++|+|+.+|+ +++++++++++.++++++|+++++++++
T Consensus 1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~-~vi~~~~~~~~~~~l~~~Ga~~vi~~~~ 79 (183)
T d1pqwa_ 1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSRLGVEYVGDSRS 79 (183)
T ss_dssp CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHTTCCSEEEETTC
T ss_pred CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccc-cceeeecccccccccccccccccccCCc
Confidence 5899999999999999999999999999999986 9999999999999999 8888888999999999999999999887
Q ss_pred CCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCC--
Q 017431 241 HDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF-- 317 (371)
Q Consensus 241 ~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-- 317 (371)
.++.+.+++.+++ |+|++|||+|+ +.++.++++++++ |++|.+|..............+.++.++.++.+...
T Consensus 80 --~~~~~~v~~~t~~~g~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (183)
T d1pqwa_ 80 --VDFADEILELTDGYGVDVVLNSLAG-EAIQRGVQILAPG-GRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNLK 155 (183)
T ss_dssp --STHHHHHHHHTTTCCEEEEEECCCT-HHHHHHHHTEEEE-EEEEECSCGGGTTTCEEEGGGGTTTCEEEECCHHHHHH
T ss_pred --cCHHHHHHHHhCCCCEEEEEecccc-hHHHHHHHHhcCC-CEEEEEccCCCCCCcccchHHHhCCcEEEEEEccceec
Confidence 7899999999998 99999999998 5699999999996 999999865432222333333445777777654322
Q ss_pred ----cccCcHHHHHHHHHcCCCCCCCc
Q 017431 318 ----KSRSQVPWLVDKYMKKEIKVDEY 340 (371)
Q Consensus 318 ----~~~~~~~~~~~~~~~~~~~~~~~ 340 (371)
..++.++++++++++|++++.|+
T Consensus 156 ~~~~~~~~~~~~v~~~i~~G~i~p~Pi 182 (183)
T d1pqwa_ 156 LQPARYRQLLQHILQHVADGKLEVLPV 182 (183)
T ss_dssp HCHHHHHHHHHHHHHHHHTTSSCCCCC
T ss_pred cCHHHHHHHHHHHHHHHHCCCCceeCC
Confidence 11345788899999999987643
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=99.94 E-value=7.7e-26 Score=188.62 Aligned_cols=174 Identities=52% Similarity=0.937 Sum_probs=144.5
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCC
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 239 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~ 239 (371)
++++||.++|++.|+|+++++.+++++|++|||+|+|++|++++++++.+|+.+|++++++++|+++++++|+++++++.
T Consensus 2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~ 81 (176)
T d2jhfa2 2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ 81 (176)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecC
Confidence 46789999999999999999999999999999999999999999999999988999999999999999999999999876
Q ss_pred CCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCC-CCCcccccchheeeceEEEeeecCCCc
Q 017431 240 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA-SGQEISTRPFQLVTGRVWKGTAFGGFK 318 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~ 318 (371)
+.+......++..+++|+|++||++|.+.+.+.++..++++ |..+.++... ........+..+.+++++.|+..++..
T Consensus 82 ~~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~ 160 (176)
T d2jhfa2 82 DYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEA-YGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFK 160 (176)
T ss_dssp GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTT-TCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCC
T ss_pred CchhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcC-CcceEEecCCCCcccccccHHHHhCCCEEEEEEEeCCC
Confidence 64334444444454459999999999999899999999996 5555554433 333344445555679999999888777
Q ss_pred ccCcHHHHHHHHHcCC
Q 017431 319 SRSQVPWLVDKYMKKE 334 (371)
Q Consensus 319 ~~~~~~~~~~~~~~~~ 334 (371)
.+++++++++++.+||
T Consensus 161 ~~~~~~~li~~~~~GK 176 (176)
T d2jhfa2 161 SKDSVPKLVADFMAKK 176 (176)
T ss_dssp HHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHCcC
Confidence 7789999999998875
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=99.93 E-value=1.1e-25 Score=188.64 Aligned_cols=169 Identities=22% Similarity=0.349 Sum_probs=145.1
Q ss_pred cchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 240 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~ 240 (371)
++.+|.+.|+.+|||+++.+..++++|++|||+|+|++|++++|+|+++|+++|++++++++|+++++++|+++++++.+
T Consensus 3 ~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~ 82 (182)
T d1vj0a2 3 LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRE 82 (182)
T ss_dssp HHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTT
T ss_pred HHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECCCccchhheecccccccccccccccccccccccccccceEEEeccc
Confidence 45688899999999999989999999999999999999999999999999988999999999999999999999999877
Q ss_pred CCc-hHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchh--eeeceEEEeeecCC
Q 017431 241 HDK-PIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ--LVTGRVWKGTAFGG 316 (371)
Q Consensus 241 ~~~-~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~--~~~~~~~~g~~~~~ 316 (371)
.+. ++.+.+.+.+++ ++|+||||+|++.+++.++++++++ |+++.+|....+..++++++. +.+++++.|++.++
T Consensus 83 ~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G~~~~~ 161 (182)
T d1vj0a2 83 TSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSD 161 (182)
T ss_dssp SCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCCC
T ss_pred cchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCC-CEEEEEeecCCCCccccccHHHHHHCCcEEEEEEeCC
Confidence 322 345568888888 9999999999988899999999997 999999976666667776554 34589999987653
Q ss_pred CcccCcHHHHHHHHHcC
Q 017431 317 FKSRSQVPWLVDKYMKK 333 (371)
Q Consensus 317 ~~~~~~~~~~~~~~~~~ 333 (371)
.+++++++++++++
T Consensus 162 ---~~~~~~~~~~i~~~ 175 (182)
T d1vj0a2 162 ---TSHFVKTVSITSRN 175 (182)
T ss_dssp ---HHHHHHHHHHHHTC
T ss_pred ---HHHHHHHHHHHHHC
Confidence 35788888888765
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=99.92 E-value=5.8e-25 Score=183.09 Aligned_cols=173 Identities=54% Similarity=0.964 Sum_probs=142.5
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCC
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 239 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~ 239 (371)
++++||.++|++.|+|+++.+.+++++|++|+|+|+|++|++++++++..|+.+|++++++++|+++++++|+++++|+.
T Consensus 2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~ 81 (175)
T d1cdoa2 2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPN 81 (175)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGG
T ss_pred CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCC
Confidence 57889999999999999999999999999999999999999999999999998999999999999999999999999987
Q ss_pred CCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCCc
Q 017431 240 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFK 318 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 318 (371)
+. .++...+.+.+.+ |+|+++|++|+..+++.++.++.++ |..+.++...........+..+.+++++.|+..+++.
T Consensus 82 ~~-~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g-~~~~~~~g~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~ 159 (175)
T d1cdoa2 82 DH-SEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKG-WGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGGFK 159 (175)
T ss_dssp GC-SSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTT-TCEEEECSCCSSSCEEECHHHHHTTCEEEECSGGGCC
T ss_pred Cc-chhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCC-CcceeEEEecCCcccCccHHHHHCCcEEEEEEEeCCc
Confidence 63 2344555565555 9999999999988899999988886 5554443333333333333334558899999888877
Q ss_pred ccCcHHHHHHHHHcCC
Q 017431 319 SRSQVPWLVDKYMKKE 334 (371)
Q Consensus 319 ~~~~~~~~~~~~~~~~ 334 (371)
.++++++++++++++|
T Consensus 160 ~~~d~~~~i~l~~~gK 175 (175)
T d1cdoa2 160 GKDGVPKMVKAYLDKK 175 (175)
T ss_dssp HHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHcCC
Confidence 7789999999998875
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=99.92 E-value=1.8e-25 Score=185.33 Aligned_cols=167 Identities=20% Similarity=0.266 Sum_probs=146.8
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
+|+.+||.++|++.|||+++ +..++++|++|||+|+ |++|++++|+++++|+.+|++++++++|+++++++|++++++
T Consensus 1 l~~~eAA~l~c~~~Ta~~al-~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~ 79 (170)
T d1jvba2 1 LNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVIN 79 (170)
T ss_dssp SCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeec
Confidence 57899999999999999987 6689999999999996 999999999999999879999999999999999999999999
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecC
Q 017431 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFG 315 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~ 315 (371)
+.+ .++.+.+++.+++ ++|++|||+|++..++.++++++++ |+++.+|.+..+ .+++...+. +++++.|+..+
T Consensus 80 ~~~--~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~k~i~i~Gs~~~ 154 (170)
T d1jvba2 80 ASM--QDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLFGAD--LHYHAPLITLSEIQFVGSLVG 154 (170)
T ss_dssp TTT--SCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEE-EEEEECCSSCCC--CCCCHHHHHHHTCEEEECCSC
T ss_pred cCC--cCHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccC-CEEEEeccccCc--cccCHHHHHhCCcEEEEEecC
Confidence 877 7788888898887 8999999999988899999999996 999999976433 455544444 49999998765
Q ss_pred CCcccCcHHHHHHHHHcCC
Q 017431 316 GFKSRSQVPWLVDKYMKKE 334 (371)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~ 334 (371)
+ +++++++++++++||
T Consensus 155 ~---~~d~~~~l~lv~~GK 170 (170)
T d1jvba2 155 N---QSDFLGIMRLAEAGK 170 (170)
T ss_dssp C---HHHHHHHHHHHHTTS
T ss_pred C---HHHHHHHHHHHHcCC
Confidence 4 368999999998875
|
| >d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=99.92 E-value=1.1e-26 Score=190.71 Aligned_cols=151 Identities=18% Similarity=0.165 Sum_probs=126.5
Q ss_pred CcceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCC-CCCcccccceeEEEEEeCCCCCCC
Q 017431 1 MCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVTEV 77 (371)
Q Consensus 1 ~~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~-~~p~v~G~e~~G~V~~~G~~v~~~ 77 (371)
||||+++.+++++ +++++++.|++.+|||||||++++||++|++.+.|.++.. ..|.++|+|++|+|++. .++++
T Consensus 3 ~~ka~~~~~~g~~~~l~~~~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~ 80 (162)
T d1tt7a1 3 LFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVSS--NDPRF 80 (162)
T ss_dssp EEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEEC--SSTTC
T ss_pred cEEEEEEEecCCCeEEEEEEcCCCCCCCCEEEEEEEEecccchhhheeeecccccccceeeeeeecccccccc--ccccc
Confidence 5899999988876 9999999999999999999999999999999999987654 56789999999999984 45789
Q ss_pred CCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCC
Q 017431 78 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 157 (371)
Q Consensus 78 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~ 157 (371)
++||+|+..+.. .|.. .+ |+|+||+.+|++.++++|+
T Consensus 81 ~~g~~v~~~~~~------------------------~g~~-~~------------------G~~aey~~v~~~~l~~iP~ 117 (162)
T d1tt7a1 81 AEGDEVIATSYE------------------------LGVS-RD------------------GGLSEYASVPGDWLVPLPQ 117 (162)
T ss_dssp CTTCEEEEESTT------------------------BTTT-BC------------------CSSBSSEEECGGGEEECCT
T ss_pred ccceeeEeeecc------------------------ceec-cc------------------cccceEEEecHHHEEECCC
Confidence 999999754321 0111 23 3999999999999999999
Q ss_pred CCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-Ch
Q 017431 158 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GT 197 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~ 197 (371)
++|+++||.+++.++|||.++.. .....+++|||.|+ |.
T Consensus 118 ~ls~~~Aa~~~~~~~ta~~~~~~-~~~~~~~~Vli~ga~G~ 157 (162)
T d1tt7a1 118 NLSLKEAMVDQLLTIVDREVSLE-ETPGALKDILQNRIQGR 157 (162)
T ss_dssp TCCHHHHHHSCSTTSEEEEECST-THHHHHHHTTTTCCSSE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCcce
Confidence 99999999999999999987643 45566678888876 53
|
| >d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=99.92 E-value=4.2e-25 Score=177.34 Aligned_cols=132 Identities=15% Similarity=0.157 Sum_probs=111.1
Q ss_pred cceEEeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCC-CCCcccccceeEEEEEeCCCCCCCC
Q 017431 2 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVTEVQ 78 (371)
Q Consensus 2 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~-~~p~v~G~e~~G~V~~~G~~v~~~~ 78 (371)
|||+++.+++++ +++++++.|+|+++||+|||++++||++|++...|.++.. .+|.++|+|++|+|+++|. ..++
T Consensus 1 MkA~v~~~~~~~~~l~i~~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~~~~~~p~v~G~e~~G~V~~~~~--~~~~ 78 (146)
T d1o89a1 1 LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSED--PRFH 78 (146)
T ss_dssp CEEEEEECC---CEEEEEECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSSCCCSSSBCCCSEEEEEEEEECS--TTCC
T ss_pred CeEEEEEcCCCceEEEEEEcCCCCCCCCEEEEEEeeccCccceeeEEEeecccccccceeccccccccceeecc--CCcc
Confidence 899999999987 8889999999999999999999999999999999987655 7899999999999999877 4799
Q ss_pred CCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEecCCC
Q 017431 79 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 158 (371)
Q Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~lP~~ 158 (371)
+||+|+..... .|.. .+ |+|+||+.++++.++++|++
T Consensus 79 ~g~~v~~~~~~------------------------~g~~-~~------------------G~~Aey~~v~~~~vv~lP~~ 115 (146)
T d1o89a1 79 AGQEVLLTGWG------------------------VGEN-HW------------------GGLAEQARVKGDWLVAMPQG 115 (146)
T ss_dssp TTCEEEEECTT------------------------BTTT-BC------------------CSSBSEEEECGGGCEECCTT
T ss_pred ceeeEEeeccc------------------------ceec-CC------------------CcceeeeeeeeeeEEECCCC
Confidence 99999754310 1111 23 49999999999999999999
Q ss_pred CCcchhhhccccchhhhhhh
Q 017431 159 APLDKVCLLGCGVPTGLGAV 178 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l 178 (371)
+|+++||+++++..||+..+
T Consensus 116 ls~~eAA~l~~a~~tA~~~~ 135 (146)
T d1o89a1 116 QAAKEISLSEAPNFAEAIIN 135 (146)
T ss_dssp SCCEEECGGGHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHH
Confidence 99999999998888886543
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=2.1e-24 Score=178.96 Aligned_cols=169 Identities=21% Similarity=0.308 Sum_probs=138.1
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
+|+++||.+. ++++||+++ ++.++++|++|||+|+|++|++++|+|+++|+++|++++++++|+++++++|++++++.
T Consensus 1 vS~e~Aal~e-pla~a~~a~-~~~~~~~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~ 78 (171)
T d1pl8a2 1 VTFEEGALIE-PLSVGIHAC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQI 78 (171)
T ss_dssp SCHHHHHHHH-HHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred CCHHHHHHHH-HHHHHHHHH-HHhCCCCCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcccccc
Confidence 5788888764 788999986 67899999999999999999999999999999899999999999999999999999888
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecCC
Q 017431 239 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGG 316 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~ 316 (371)
.+.+........+.+.+ ++|++|||+|++..++.++++++++ |+++.+|.+.. ..+++...+. +++++.|+..
T Consensus 79 ~~~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~g-G~iv~~G~~~~--~~~~~~~~~~~k~l~i~Gs~~-- 153 (171)
T d1pl8a2 79 SKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLGSE--MTTVPLLHAAIREVDIKGVFR-- 153 (171)
T ss_dssp SSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCCS--CCCCCHHHHHHTTCEEEECCS--
T ss_pred cccccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCC-CEEEEEecCCC--CCccCHHHHHHCCcEEEEEeC--
Confidence 76322222222223334 8999999999999999999999996 99999998653 3455555544 4899998753
Q ss_pred CcccCcHHHHHHHHHcCCCC
Q 017431 317 FKSRSQVPWLVDKYMKKEIK 336 (371)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~ 336 (371)
+.++++++++++++|+++
T Consensus 154 --~~~~~~~al~li~~gkid 171 (171)
T d1pl8a2 154 --YCNTWPVAISMLASKSVN 171 (171)
T ss_dssp --CSSCHHHHHHHHHTTSCC
T ss_pred --CHhHHHHHHHHHHcCCCC
Confidence 236899999999999874
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=99.91 E-value=1.2e-24 Score=180.45 Aligned_cols=164 Identities=22% Similarity=0.355 Sum_probs=140.8
Q ss_pred cchhhhccccchhhhhhhhhcC-CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCC
Q 017431 161 LDKVCLLGCGVPTGLGAVWNTA-KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 239 (371)
Q Consensus 161 ~~~aa~~~~~~~ta~~~l~~~~-~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~ 239 (371)
+.++|.++++++|||+++.+.. .+++|++|||.|+|++|++++|+++++|+.+|++++++++|+++++++|+++++++.
T Consensus 6 l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~ 85 (172)
T d1h2ba2 6 LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDAR 85 (172)
T ss_dssp HHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETT
T ss_pred HHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCc
Confidence 5688999999999999997765 489999999999999999999999999998999999999999999999999999887
Q ss_pred CCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheee-ceEEEeeecCCC
Q 017431 240 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGF 317 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~ 317 (371)
+ . ..+...+.+++ ++|++|||+|+...++.++++++++ |+++.+|... ..+++...++. ++++.|+..++
T Consensus 86 ~--~-~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~-G~iv~~G~~~---~~~~~~~~l~~k~~~i~Gs~~~~- 157 (172)
T d1h2ba2 86 R--D-PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GRLIIVGYGG---ELRFPTIRVISSEVSFEGSLVGN- 157 (172)
T ss_dssp S--C-HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEE-EEEEECCCSS---CCCCCHHHHHHTTCEEEECCSCC-
T ss_pred c--c-HHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCC-CEEEEEeCcc---cccCCHHHHHhCCcEEEEEEecC-
Confidence 5 3 44556677777 9999999999988899999999997 9999998632 34566555544 99999997654
Q ss_pred cccCcHHHHHHHHHcCC
Q 017431 318 KSRSQVPWLVDKYMKKE 334 (371)
Q Consensus 318 ~~~~~~~~~~~~~~~~~ 334 (371)
+.+++++++++++||
T Consensus 158 --~~d~~~~l~l~~~GK 172 (172)
T d1h2ba2 158 --YVELHELVTLALQGK 172 (172)
T ss_dssp --HHHHHHHHHHHHTTS
T ss_pred --HHHHHHHHHHHHcCC
Confidence 368999999998875
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=99.91 E-value=6.3e-25 Score=183.57 Aligned_cols=128 Identities=22% Similarity=0.313 Sum_probs=119.8
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
+|+++||+++++++|||++|.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++++|+++++|
T Consensus 1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga-~Vi~~~~s~~k~~~~~~lGa~~vi~ 79 (179)
T d1qora2 1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVIN 79 (179)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCC-eEeecccchHHHHHHHhcCCeEEEE
Confidence 5889999999999999999999999999999999977 8899999999999999 9999999999999999999999999
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCC
Q 017431 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
+++ .++.+.++++|++ ++|+++|++++ +.+..++++++++ |+++.++...
T Consensus 80 ~~~--~d~~~~v~~~t~g~g~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~ 130 (179)
T d1qora2 80 YRE--EDLVERLKEITGGKKVRVVYDSVGR-DTWERSLDCLQRR-GLMVSFGNSS 130 (179)
T ss_dssp TTT--SCHHHHHHHHTTTCCEEEEEECSCG-GGHHHHHHTEEEE-EEEEECCCTT
T ss_pred CCC--CCHHHHHHHHhCCCCeEEEEeCccH-HHHHHHHHHHhcC-Ceeeeccccc
Confidence 988 8899999999998 99999999987 5699999999996 9999988753
|
| >d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=99.91 E-value=2.1e-26 Score=191.98 Aligned_cols=155 Identities=19% Similarity=0.107 Sum_probs=127.9
Q ss_pred CcceEEeecCCCC-----eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCC----------CCCcccccceeE
Q 017431 1 MCKAAVAWEPNKP-----LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG----------LFPCILGHEAAG 65 (371)
Q Consensus 1 ~~~a~~~~~~~~~-----~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~----------~~p~v~G~e~~G 65 (371)
||||+++.++|+| ++..++|.|+|.++||||||++++||++|++.++|..+.. ..|.++|+|++|
T Consensus 3 t~kA~v~~~~G~p~~~l~l~~~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~~g 82 (175)
T d1gu7a1 3 TAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLF 82 (175)
T ss_dssp EEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCEE
T ss_pred eeEEEEEccCCCcccccEEEEEECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCccccccccc
Confidence 6899999999987 4455677778899999999999999999999988865322 467789999999
Q ss_pred EEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeE
Q 017431 66 IVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYT 145 (371)
Q Consensus 66 ~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~ 145 (371)
+|+++|.+++.++.||+|..... .+ |+|+||+
T Consensus 83 ~V~~~~~~~~~~~~g~~v~~~~~------------------------------~~------------------g~~aey~ 114 (175)
T d1gu7a1 83 EVIKVGSNVSSLEAGDWVIPSHV------------------------------NF------------------GTWRTHA 114 (175)
T ss_dssp EEEEECTTCCSCCTTCEEEESSS------------------------------CC------------------CCSBSEE
T ss_pred ccccccccccccccccceecccc------------------------------cc------------------cccccee
Confidence 99999999999999999974432 22 3999999
Q ss_pred EecccceEecCCCCCcchhhhccccchhhhhhhhh-cCCCCCCCEEEEEc-C-ChHHHHHHHH
Q 017431 146 VVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN-TAKVEPGSIVAVFG-L-GTVGLAVAEG 205 (371)
Q Consensus 146 ~v~~~~v~~lP~~~~~~~aa~~~~~~~ta~~~l~~-~~~~~~g~~VlI~G-a-g~vG~~ai~l 205 (371)
.+++++++++|++++ .++++++..+|||+++.. ..++++|++|||.| + |++|.+++|+
T Consensus 115 ~v~~~~~~~iP~~~~--~~~a~~~~~~ta~~~l~~~~~~~~~g~~vli~gaa~~gvG~~~iQ~ 175 (175)
T d1gu7a1 115 LGNDDDFIKLPNPAQ--SKANGKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY 175 (175)
T ss_dssp EEEGGGEEEECCHHH--HHHTTCSCCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred eehhhhccCCCccch--hhhhccchHHHHHHHHHHHhcCCCCCCEEEEECccchhhhheEEeC
Confidence 999999999999875 333445678899988764 46799999999996 4 6799888763
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.91 E-value=9.3e-25 Score=180.55 Aligned_cols=169 Identities=16% Similarity=0.160 Sum_probs=131.7
Q ss_pred CCcchhhhccccchhhhhh---hhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE
Q 017431 159 APLDKVCLLGCGVPTGLGA---VWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 234 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~---l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~ 234 (371)
+|++|||+++++++|||++ |++.++.++|++|||+|+ |++|.+++|+|+.+|+ +|+++.+++++.++++++|+++
T Consensus 1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga-~Viat~~s~~k~~~~~~lGa~~ 79 (176)
T d1xa0a2 1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGAKE 79 (176)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTCSE
T ss_pred CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCC-ceEEecCchHHHHHHHhcccce
Confidence 5889999999999999965 456788999999999987 9999999999999999 8999999999999999999999
Q ss_pred EecCCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEee
Q 017431 235 FVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGT 312 (371)
Q Consensus 235 vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~ 312 (371)
++++++ .+.+.+ +.+++ ++|+|||++|+. .+..++++|+++ |+++.+|... +...+++...++ +++++.|+
T Consensus 80 vi~~~~---~~~~~~-~~~~~~gvD~vid~vgg~-~~~~~l~~l~~~-Griv~~G~~~-g~~~~~~~~~~~~k~~~i~Gv 152 (176)
T d1xa0a2 80 VLARED---VMAERI-RPLDKQRWAAAVDPVGGR-TLATVLSRMRYG-GAVAVSGLTG-GAEVPTTVHPFILRGVSLLGI 152 (176)
T ss_dssp EEECC-------------CCSCCEEEEEECSTTT-THHHHHHTEEEE-EEEEECSCCS-SSCCCCCSHHHHHTTCEEEEC
T ss_pred eeecch---hHHHHH-HHhhccCcCEEEEcCCch-hHHHHHHHhCCC-ceEEEeeccc-CcccCCCHHHHHHCCcEEEEE
Confidence 998765 333344 44444 999999999994 599999999996 9999999853 344566666554 48999997
Q ss_pred ecCCCcccCcHHHHHHHHHcCCCCC
Q 017431 313 AFGGFKSRSQVPWLVDKYMKKEIKV 337 (371)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (371)
.... ...+....+++.++ ++++|
T Consensus 153 ~~~~-~~~~~~~~~~~~la-g~lkP 175 (176)
T d1xa0a2 153 DSVY-CPMDLRLRIWERLA-GDLKP 175 (176)
T ss_dssp CSSS-CCHHHHHHHHHHHH-TTTCC
T ss_pred eCCc-CCHHHHHHHHHHHh-cccCC
Confidence 5432 23355666666664 65554
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.91 E-value=2.8e-24 Score=177.29 Aligned_cols=164 Identities=23% Similarity=0.346 Sum_probs=140.1
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
+++++||.++|+++|||+++ +..++++|++|||.|+|++|++++|+||.+|+ +|++++++++|+++++++|+++++++
T Consensus 1 v~f~~aA~l~ca~~Ta~~al-~~~~~~~g~~VlV~GaG~vG~~~~~~ak~~G~-~Vi~~~~~~~~~~~a~~~Ga~~~i~~ 78 (166)
T d1llua2 1 VEFAEIAPILCAGVTVYKGL-KQTNARPGQWVAISGIGGLGHVAVQYARAMGL-HVAAIDIDDAKLELARKLGASLTVNA 78 (166)
T ss_dssp SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeeccccHHHHHHHHHHcCC-ccceecchhhHHHhhhccCccccccc
Confidence 57899999999999999997 56899999999999999999999999999998 99999999999999999999999998
Q ss_pred CCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecCCC
Q 017431 239 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGF 317 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~ 317 (371)
.+ .++.+.+.+.+. +++.+++++++++.++.++++++++ |+++.+|... ...+++...+. +++++.|+..+.
T Consensus 79 ~~--~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~k~~~i~Gs~~~~- 151 (166)
T d1llua2 79 RQ--EDPVEAIQRDIG-GAHGVLVTAVSNSAFGQAIGMARRG-GTIALVGLPP--GDFPTPIFDVVLKGLHIAGSIVGT- 151 (166)
T ss_dssp TT--SCHHHHHHHHHS-SEEEEEECCSCHHHHHHHHTTEEEE-EEEEECCCCS--SEEEEEHHHHHHTTCEEEECCSCC-
T ss_pred cc--hhHHHHHHHhhc-CCcccccccccchHHHHHHHHhcCC-cEEEEEEecC--CCccCCHHHHHhCCcEEEEEeecC-
Confidence 87 667777777654 5666677777778899999999996 9999999754 34556655554 499999987653
Q ss_pred cccCcHHHHHHHHHcC
Q 017431 318 KSRSQVPWLVDKYMKK 333 (371)
Q Consensus 318 ~~~~~~~~~~~~~~~~ 333 (371)
+++++++++++++|
T Consensus 152 --~~d~~e~l~l~~~G 165 (166)
T d1llua2 152 --RADLQEALDFAGEG 165 (166)
T ss_dssp --HHHHHHHHHHHHTT
T ss_pred --HHHHHHHHHHHHCc
Confidence 46899999999876
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=99.91 E-value=3.3e-24 Score=179.53 Aligned_cols=164 Identities=19% Similarity=0.195 Sum_probs=133.3
Q ss_pred hhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCc
Q 017431 165 CLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDK 243 (371)
Q Consensus 165 a~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~ 243 (371)
++++++++|||++|.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++++|+++++++.+ .
T Consensus 8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~Ga~~vi~~~~--~ 84 (182)
T d1v3va2 8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKT--V 84 (182)
T ss_dssp TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTS--C
T ss_pred HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCC-EEEEeCCCHHHHHHHHhhhhhhhccccc--c
Confidence 4677889999999999999999999999988 8999999999999999 9999999999999999999999999887 6
Q ss_pred hHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCC-----CCcccccchhe-eeceEEEeeecCC
Q 017431 244 PIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS-----GQEISTRPFQL-VTGRVWKGTAFGG 316 (371)
Q Consensus 244 ~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-----~~~~~~~~~~~-~~~~~~~g~~~~~ 316 (371)
++.+.+.+.+++ ++|++||++|+ +.++.++++++++ |+++.+|.... .....+++..+ .+++++.|+....
T Consensus 85 ~~~~~~~~~~~~~Gvd~v~D~vG~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~~ 162 (182)
T d1v3va2 85 NSLEEALKKASPDGYDCYFDNVGG-EFLNTVLSQMKDF-GKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYR 162 (182)
T ss_dssp SCHHHHHHHHCTTCEEEEEESSCH-HHHHHHGGGEEEE-EEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGGG
T ss_pred cHHHHHHHHhhcCCCceeEEecCc-hhhhhhhhhccCC-CeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEec
Confidence 677777777776 99999999997 6799999999996 99999986421 12223333333 3489999987765
Q ss_pred Ccc---cCcHHHHHHHHHcC
Q 017431 317 FKS---RSQVPWLVDKYMKK 333 (371)
Q Consensus 317 ~~~---~~~~~~~~~~~~~~ 333 (371)
+.. .+.++++++++++|
T Consensus 163 ~~~~~~~~~~~~l~~~i~~G 182 (182)
T d1v3va2 163 WQGDVREKALRDLMKWVLEG 182 (182)
T ss_dssp CCHHHHHHHHHHHHHHHHTT
T ss_pred cChHHHHHHHHHHHHHHhCc
Confidence 532 12356666776654
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=99.90 E-value=2e-23 Score=172.82 Aligned_cols=166 Identities=22% Similarity=0.301 Sum_probs=135.1
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
+|+++||.+. ++++||+++ +..++++|++|||+|+|++|++++|+|+++|+ +|++++++++|+++++++|++..++.
T Consensus 1 VS~e~Aal~e-Pla~a~~a~-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~Ga-~vi~v~~~~~r~~~a~~~ga~~~~~~ 77 (170)
T d1e3ja2 1 VSLEEGALLE-PLSVGVHAC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVV 77 (170)
T ss_dssp SCHHHHHTHH-HHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred CCHHHHHHHH-HHHHHHHHH-HHhCCCCCCEEEEEcccccchhhHhhHhhhcc-cccccchHHHHHHHHHHcCCcEEEec
Confidence 5788888764 778999986 67789999999999999999999999999999 89999999999999999999887665
Q ss_pred CCCCch---HHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeec
Q 017431 239 KDHDKP---IQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAF 314 (371)
Q Consensus 239 ~~~~~~---~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~ 314 (371)
.....+ ..+.+.+..++++|++|||+|++.+++.++++++++ |+++.+|.... ..+++...+. +++++.|+..
T Consensus 78 ~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~-G~iv~~G~~~~--~~~~~~~~~~~k~i~i~gs~~ 154 (170)
T d1e3ja2 78 DPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGMGSQ--MVTVPLVNACAREIDIKSVFR 154 (170)
T ss_dssp CTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCSS--CCCCCHHHHHTTTCEEEECCS
T ss_pred cccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcC-CceEEEecCCC--CCCcCHHHHHHCCCEEEEEEC
Confidence 443233 334444444559999999999998899999999997 99999997643 3455555554 4889998753
Q ss_pred CCCcccCcHHHHHHHHHcCC
Q 017431 315 GGFKSRSQVPWLVDKYMKKE 334 (371)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~ 334 (371)
+.++++++++++++|+
T Consensus 155 ----~~~~~~~ai~li~~Gk 170 (170)
T d1e3ja2 155 ----YCNDYPIALEMVASGR 170 (170)
T ss_dssp ----CSSCHHHHHHHHHTTS
T ss_pred ----CHHHHHHHHHHHHcCC
Confidence 2357899999998875
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.90 E-value=1.2e-23 Score=173.80 Aligned_cols=167 Identities=23% Similarity=0.386 Sum_probs=142.4
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecC
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 238 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~ 238 (371)
+|+++||+++++++|||+++ +..++++|++|||+|+|++|++++|+++..|+ +|++++++++|+++++++|++.++++
T Consensus 1 ls~eeAA~l~~~~~Ta~~al-~~~~~~~g~~vlv~G~G~iG~~a~~~a~~~g~-~v~~~~~~~~r~~~~k~~Ga~~~~~~ 78 (168)
T d1rjwa2 1 LSFEEAAPIFCAGVTTYKAL-KVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNP 78 (168)
T ss_dssp SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECT
T ss_pred CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeecccchhhhhHHHhcCCC-eEeccCCCHHHhhhhhhcCcceeccc
Confidence 57899999999999999987 56789999999999999999999999999999 89999999999999999999999998
Q ss_pred CCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchheee-ceEEEeeecCCC
Q 017431 239 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGF 317 (371)
Q Consensus 239 ~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~ 317 (371)
.+ .++...+++.+.+..|++ +++++++.++.++++++++ |+++.+|... ...+++...+.. ++++.|+..+
T Consensus 79 ~~--~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~a~~~l~~~-G~i~~~g~~~--~~~~~~~~~~~~~~~~i~gs~~~-- 150 (168)
T d1rjwa2 79 LK--EDAAKFMKEKVGGVHAAV-VTAVSKPAFQSAYNSIRRG-GACVLVGLPP--EEMPIPIFDTVLNGIKIIGSIVG-- 150 (168)
T ss_dssp TT--SCHHHHHHHHHSSEEEEE-ESSCCHHHHHHHHHHEEEE-EEEEECCCCS--SEEEEEHHHHHHTTCEEEECCSC--
T ss_pred cc--chhhhhcccccCCCceEE-eecCCHHHHHHHHHHhccC-CceEeccccc--CCCCCCHHHHHHCCcEEEEEeeC--
Confidence 88 678888888887544444 5667778899999999996 9999998754 344555555444 8999988654
Q ss_pred cccCcHHHHHHHHHcCCCC
Q 017431 318 KSRSQVPWLVDKYMKKEIK 336 (371)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~ 336 (371)
.+++++++++++++|+++
T Consensus 151 -~~~~~~~~l~l~~~Gkik 168 (168)
T d1rjwa2 151 -TRKDLQEALQFAAEGKVK 168 (168)
T ss_dssp -CHHHHHHHHHHHHTTSCC
T ss_pred -CHHHHHHHHHHHHhCCCC
Confidence 346899999999999874
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.90 E-value=3.2e-24 Score=177.16 Aligned_cols=165 Identities=20% Similarity=0.276 Sum_probs=134.2
Q ss_pred CcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCC
Q 017431 160 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 239 (371)
Q Consensus 160 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~ 239 (371)
+++.||.+.|+..|+|+++ +..++++|++|||+|+|++|++++|+||.+|+ +|++++++++|.++++++|+++++++.
T Consensus 2 p~e~AApl~cag~Ta~~al-~~~~~~~g~~vlI~GaG~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~a~~lGa~~~i~~~ 79 (168)
T d1piwa2 2 PSHLAAPLLCGGLTVYSPL-VRNGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADHYIATL 79 (168)
T ss_dssp CHHHHGGGGTHHHHHHHHH-HHTTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEGG
T ss_pred CHHHHHHHHHHHHHHHHHH-HHhCcCCCCEEEEECCCCcchhHHHHhhhccc-cccccccchhHHHHhhccCCcEEeecc
Confidence 4577899999999999998 46799999999999999999999999999999 899999999999999999999999876
Q ss_pred CCCchHHHHHHhhcCCCccEEEEccCCHH--HHHHHHHHhccCCceEEEEccCCCCCcccccchheeeceEEEeeecCCC
Q 017431 240 DHDKPIQQVLVDLTDGGVDYSFECIGNVS--VMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF 317 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~gg~dvvid~~g~~~--~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 317 (371)
+. .++. +...+++|++++|+++.. .++.++++++++ |+++.+|....+..+++.+. +.+++++.|+..++
T Consensus 80 ~~-~~~~----~~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~-~~k~~~i~Gs~~g~- 151 (168)
T d1piwa2 80 EE-GDWG----EKYFDTFDLIVVCASSLTDIDFNIMPKAMKVG-GRIVSISIPEQHEMLSLKPY-GLKAVSISYSALGS- 151 (168)
T ss_dssp GT-SCHH----HHSCSCEEEEEECCSCSTTCCTTTGGGGEEEE-EEEEECCCCCSSCCEEECGG-GCBSCEEEECCCCC-
T ss_pred ch-HHHH----HhhhcccceEEEEecCCccchHHHHHHHhhcc-ceEEEeccccccccccHHHH-HhCCcEEEEEeeCC-
Confidence 52 2332 223348999999988643 467899999996 99999997654444444333 23589999987654
Q ss_pred cccCcHHHHHHHHHcCCCC
Q 017431 318 KSRSQVPWLVDKYMKKEIK 336 (371)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~ 336 (371)
+++++++++++++++++
T Consensus 152 --~~~~~e~l~li~~gkIk 168 (168)
T d1piwa2 152 --IKELNQLLKLVSEKDIK 168 (168)
T ss_dssp --HHHHHHHHHHHHHTTCC
T ss_pred --HHHHHHHHHHHHhCCCC
Confidence 46899999999999874
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=99.89 E-value=9.9e-24 Score=174.25 Aligned_cols=165 Identities=24% Similarity=0.335 Sum_probs=131.9
Q ss_pred CCCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 158 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
+.++..+|.++|+..|+|+++ +..++++|++|||+|+|++|++++|+||.+|+ ++++++++++++++++++|++++++
T Consensus 3 ~~~~a~~Apl~Cag~Tay~al-~~~~~~~G~~VlI~GaG~vG~~a~qlak~~Ga-~~i~~~~~~~~~~~a~~lGad~~i~ 80 (168)
T d1uufa2 3 QEQLAAVAPLLCAGITTYSPL-RHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVN 80 (168)
T ss_dssp GGGHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEE
T ss_pred cccHHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEeccchHHHHHHHHhhcccc-cchhhccchhHHHHHhccCCcEEEE
Confidence 345677888899999999998 67999999999999999999999999999999 7778889999999999999999999
Q ss_pred CCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecCC
Q 017431 238 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGG 316 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~ 316 (371)
+.+ .... ....+++|++||++|.+..++.++++++++ |+++.+|.... ....++...+. +++++.|+..++
T Consensus 81 ~~~--~~~~----~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~l~~k~~~i~Gs~~~~ 152 (168)
T d1uufa2 81 SRN--ADEM----AAHLKSFDFILNTVAAPHNLDDFTTLLKRD-GTMTLVGAPAT-PHKSPEVFNLIMKRRAIAGSMIGG 152 (168)
T ss_dssp TTC--HHHH----HTTTTCEEEEEECCSSCCCHHHHHTTEEEE-EEEEECCCC--------CHHHHHTTTCEEEECCSCC
T ss_pred Cch--hhHH----HHhcCCCceeeeeeecchhHHHHHHHHhcC-CEEEEeccCCC-CcccccHHHHHHCCcEEEEEeecC
Confidence 876 3321 111238999999999988899999999996 99999987533 23344544443 589999987654
Q ss_pred CcccCcHHHHHHHHHcCCC
Q 017431 317 FKSRSQVPWLVDKYMKKEI 335 (371)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~ 335 (371)
+.++++++++++++++
T Consensus 153 ---~~d~~e~l~l~a~~~I 168 (168)
T d1uufa2 153 ---IPETQEMLDFCAEHGI 168 (168)
T ss_dssp ---HHHHHHHHHHHHHHTC
T ss_pred ---HHHHHHHHHHHHHcCC
Confidence 4688999999987653
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=99.89 E-value=3.3e-24 Score=177.51 Aligned_cols=146 Identities=23% Similarity=0.301 Sum_probs=119.1
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 237 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~ 237 (371)
+|+++||+++++++|||+++. ..++++|++|||+|+ |++|++++|+||++|+ +|+++++++++.++++++|++++++
T Consensus 1 ls~eeAA~l~~~~~TA~~al~-~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~-~vi~~~~~~~~~~~~~~lGa~~~i~ 78 (171)
T d1iz0a2 1 LSPEEAAAFPVSFLTAYLALK-RAQARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAAT 78 (171)
T ss_dssp CCHHHHHTSHHHHHHHHHHHH-HTTCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEeccccchhhhhhhhccccc-ccccccccccccccccccccceeee
Confidence 578999999999999999985 589999999999987 9999999999999999 8999999999999999999999998
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecC
Q 017431 238 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFG 315 (371)
Q Consensus 238 ~~~~~~~~~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~ 315 (371)
+.+ . ..+.+++ |+|++||++|. .++.++++++++ |+++.+|... +...++++..++ +++++.|+++.
T Consensus 79 ~~~----~---~~~~~~~~g~D~v~d~~G~--~~~~~~~~l~~~-G~~v~~G~~~-g~~~~~~~~~~~~k~~~i~g~~~~ 147 (171)
T d1iz0a2 79 YAE----V---PERAKAWGGLDLVLEVRGK--EVEESLGLLAHG-GRLVYIGAAE-GEVAPIPPLRLMRRNLAVLGFWLT 147 (171)
T ss_dssp GGG----H---HHHHHHTTSEEEEEECSCT--THHHHHTTEEEE-EEEEEC--------CCCCTTHHHHTTCEEEECCHH
T ss_pred hhh----h---hhhhhccccccccccccch--hHHHHHHHHhcC-CcEEEEeCCC-CCCCCccHHHHHHCCcEEEEEeCc
Confidence 754 2 2344445 99999999884 489999999996 9999998753 334455555544 49999998765
Q ss_pred CC
Q 017431 316 GF 317 (371)
Q Consensus 316 ~~ 317 (371)
.+
T Consensus 148 ~~ 149 (171)
T d1iz0a2 148 PL 149 (171)
T ss_dssp HH
T ss_pred Ch
Confidence 44
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=99.88 E-value=2.4e-23 Score=175.26 Aligned_cols=172 Identities=13% Similarity=0.158 Sum_probs=132.9
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCCCEEEEE-cC-ChHHHHHHHHHHHcCCCeEEEEcCCh----hhHHHHHhcCC
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF-GL-GTVGLAVAEGAKAAGASRVIGIDIDP----KKFDRAKNFGV 232 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~-Ga-g~vG~~ai~la~~~g~~~v~~v~~~~----~~~~~~~~~g~ 232 (371)
+|+++||+++++++|||++|.+..++++|++|||+ |+ |++|++++|+||++|+ +|+++.++. ++.++++++|+
T Consensus 1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga-~vI~~v~~~~~~~~~~~~~~~lGa 79 (189)
T d1gu7a2 1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLDEVVASLKELGA 79 (189)
T ss_dssp CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTTHHHHHHHHHHHTC
T ss_pred CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCC-eEEEEEecccccchHHhhhhhccc
Confidence 57899999999999999999999999999999997 65 9999999999999999 777775543 34567789999
Q ss_pred cEEecCCCC-CchHHHHHHhhc---CCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-ece
Q 017431 233 TEFVNPKDH-DKPIQQVLVDLT---DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGR 307 (371)
Q Consensus 233 ~~vi~~~~~-~~~~~~~~~~~~---~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~ 307 (371)
++++++++. ...+.+.+++.+ ++++|++||++|+ +.+..++++|+++ |++|.+|.. ++...+++...+. +++
T Consensus 80 d~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~-~~~~~~~~~l~~~-G~~v~~G~~-~~~~~~~~~~~l~~k~~ 156 (189)
T d1gu7a2 80 TQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGG-KSSTGIARKLNNN-GLMLTYGGM-SFQPVTIPTSLYIFKNF 156 (189)
T ss_dssp SEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCH-HHHHHHHHTSCTT-CEEEECCCC-SSCCEEECHHHHHHSCC
T ss_pred cEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCc-chhhhhhhhhcCC-cEEEEECCc-cCCCccCcHHHHHHCCc
Confidence 999987531 234555555544 3389999999997 4589999999996 999999874 3345566665544 489
Q ss_pred EEEeeecCCCcc------cCcHHHHHHHHHcCC
Q 017431 308 VWKGTAFGGFKS------RSQVPWLVDKYMKKE 334 (371)
Q Consensus 308 ~~~g~~~~~~~~------~~~~~~~~~~~~~~~ 334 (371)
++.|+++..+.. ++.+.++++++++|+
T Consensus 157 ~i~G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk 189 (189)
T d1gu7a2 157 TSAGFWVTELLKNNKELKTSTLNQIIAWYEEGK 189 (189)
T ss_dssp EEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence 999987654321 234666777777664
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.87 E-value=1.2e-22 Score=170.62 Aligned_cols=171 Identities=18% Similarity=0.238 Sum_probs=126.4
Q ss_pred CCcchhhhccccchhhhhhhhhcCCCCCC--CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh-HHHHHhcCCcE
Q 017431 159 APLDKVCLLGCGVPTGLGAVWNTAKVEPG--SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-FDRAKNFGVTE 234 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g--~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~-~~~~~~~g~~~ 234 (371)
+|+.+.| ++++.+|||++|++..++++| ++|||+|+ |++|++++|+||.+|+++|+++++++++ .++.+++|+++
T Consensus 2 ~~~~~ga-lg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~ 80 (187)
T d1vj1a2 2 LSYFLGA-IGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDA 80 (187)
T ss_dssp GGGGGTT-TSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSE
T ss_pred ccHHHHH-hhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceE
Confidence 5566654 667899999999999999988 88999986 9999999999999999778777666655 45667899999
Q ss_pred EecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCC-Ccccccc-------h-heee
Q 017431 235 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG-QEISTRP-------F-QLVT 305 (371)
Q Consensus 235 vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~-~~~~~~~-------~-~~~~ 305 (371)
++|+.+ +++.+.+++.++.|+|++||++|+ +.++.++++++++ |+++.+|..... ...+.++ . .+.+
T Consensus 81 vi~~~~--~~~~~~~~~~~~~GvDvv~D~vGg-~~~~~~~~~l~~~-G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~k 156 (187)
T d1vj1a2 81 AVNYKT--GNVAEQLREACPGGVDVYFDNVGG-DISNTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPPAVEAIRKER 156 (187)
T ss_dssp EEETTS--SCHHHHHHHHCTTCEEEEEESSCH-HHHHHHHTTEEEE-EEEEEC------------CCCCCHHHHHHHHHT
T ss_pred Eeeccc--hhHHHHHHHHhccCceEEEecCCc-hhHHHHhhhcccc-ccEEEeccccccccccccCCchHHHHHHHHHhc
Confidence 999988 788999999987799999999997 5699999999996 999999863210 1111111 1 1124
Q ss_pred ceEEEeeecCCCcc--cCcHHHHHHHHHcCC
Q 017431 306 GRVWKGTAFGGFKS--RSQVPWLVDKYMKKE 334 (371)
Q Consensus 306 ~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~ 334 (371)
++++.|+.+..+.. .+.++++.+++.+|+
T Consensus 157 ~i~~~g~~~~~~~~~~~e~~~~l~~~i~~Gk 187 (187)
T d1vj1a2 157 NITRERFTVLNYKDKFEPGILQLSQWFKEGK 187 (187)
T ss_dssp TCEEEECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred ceEEEEeEecchHHHHHHHHHHHHHHHHCcC
Confidence 77778776554422 233556666666654
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=99.87 E-value=1.1e-21 Score=165.22 Aligned_cols=127 Identities=31% Similarity=0.419 Sum_probs=116.6
Q ss_pred chhhhccccchhhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCC
Q 017431 162 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 241 (371)
Q Consensus 162 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~ 241 (371)
++.++++.++.|||+++ +.+++++|++|||+|+|++|++++++|+.+|+.+|++++.+++|+++++++|+++++++.+
T Consensus 2 ~d~~~l~d~~~ta~~a~-~~a~v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~- 79 (195)
T d1kola2 2 RDLTCLSDILPTGYHGA-VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLD- 79 (195)
T ss_dssp HHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSS-
T ss_pred chHHhcccHHHHHHHHH-HHhCCCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCCC-
Confidence 46778888999999997 6799999999999999999999999999999999999999999999999999999999887
Q ss_pred CchHHHHHHhhcCC-CccEEEEccCC---------------HHHHHHHHHHhccCCceEEEEccCCC
Q 017431 242 DKPIQQVLVDLTDG-GVDYSFECIGN---------------VSVMRAALECCHKGWGTSVIVGVAAS 292 (371)
Q Consensus 242 ~~~~~~~~~~~~~g-g~dvvid~~g~---------------~~~~~~~~~~l~~~~G~iv~~g~~~~ 292 (371)
.++.+.+.++|++ ++|++||++|. +.+++.++++++++ |+++.+|.+..
T Consensus 80 -~~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~g-G~v~~~G~~~~ 144 (195)
T d1kola2 80 -TPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA-GKIGIPGLYVT 144 (195)
T ss_dssp -SCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEE-EEEEECSCCCS
T ss_pred -cCHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcC-CEEEEeeecCC
Confidence 7888999999998 99999999984 36799999999996 99999997643
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=99.82 E-value=6.7e-21 Score=157.51 Aligned_cols=148 Identities=16% Similarity=0.208 Sum_probs=119.3
Q ss_pred CCcchhhhccccchhhhhhhh---hcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE
Q 017431 159 APLDKVCLLGCGVPTGLGAVW---NTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 234 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~---~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~ 234 (371)
+|+.+||.++++.+|||++++ +.....++++|||+|+ |++|.+++|+||.+|+ +|+++++++++.+.++++|+++
T Consensus 1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga-~Via~~~~~~k~~~~~~lGad~ 79 (177)
T d1o89a2 1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGASR 79 (177)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTEEE
T ss_pred CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCC-CeEEEecchhHHHHHHhhcccc
Confidence 578999999999999997764 3444556679999977 9999999999999999 8999999999999999999999
Q ss_pred EecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeee
Q 017431 235 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTA 313 (371)
Q Consensus 235 vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~ 313 (371)
++++++ .++. +.+.+..+|.++|++++ ..+..++++++++ |+++.+|... +...+++...+. +++++.|++
T Consensus 80 vi~~~~--~~~~---~~l~~~~~~~vvD~Vgg-~~~~~~l~~l~~~-Griv~~G~~~-~~~~~~~~~~~~~k~~~i~G~~ 151 (177)
T d1o89a2 80 VLPRDE--FAES---RPLEKQVWAGAIDTVGD-KVLAKVLAQMNYG-GCVAACGLAG-GFTLPTTVMPFILRNVRLQGVD 151 (177)
T ss_dssp EEEGGG--SSSC---CSSCCCCEEEEEESSCH-HHHHHHHHTEEEE-EEEEECCCTT-CSCCCCCSHHHHHHCCEEEECC
T ss_pred cccccc--HHHH---HHHHhhcCCeeEEEcch-HHHHHHHHHhccc-cceEeecccC-CccccccHHHHHHCCCeEEEEe
Confidence 999876 3322 22333478999999998 5699999999996 9999999753 344555555544 489999976
Q ss_pred cC
Q 017431 314 FG 315 (371)
Q Consensus 314 ~~ 315 (371)
..
T Consensus 152 ~~ 153 (177)
T d1o89a2 152 SV 153 (177)
T ss_dssp SS
T ss_pred cc
Confidence 54
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=99.80 E-value=3.1e-20 Score=151.97 Aligned_cols=152 Identities=15% Similarity=0.163 Sum_probs=115.2
Q ss_pred cchhhh---hhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchH
Q 017431 170 GVPTGL---GAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPI 245 (371)
Q Consensus 170 ~~~ta~---~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~ 245 (371)
+.+||| ++|.+....+++++|||+|+ |++|.+++|+||.+|+ +|+++.++++|.++++++|+++++++++ +
T Consensus 4 aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~~~~lGad~vi~~~~----~ 78 (167)
T d1tt7a2 4 AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGASEVISRED----V 78 (167)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTCSEEEEHHH----H
T ss_pred hHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCC-ceEEEecCHHHHHHHHhhcccceEeccc----h
Confidence 345665 45666677778999999987 9999999999999999 8999999999999999999999987643 2
Q ss_pred HHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccCCCCCcccccchhee-eceEEEeeecCCCcccCcH
Q 017431 246 QQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKSRSQV 323 (371)
Q Consensus 246 ~~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~ 323 (371)
.....+.+.+ ++|++||++|+ ..+..++++|+++ |+++.+|... +...+++...++ +++++.|+..... ..+..
T Consensus 79 ~~~~~~~~~~~gvd~vid~vgg-~~~~~~~~~l~~~-G~iv~~G~~~-g~~~~~~~~~l~~k~~~i~G~~~~~~-~~~~~ 154 (167)
T d1tt7a2 79 YDGTLKALSKQQWQGAVDPVGG-KQLASLLSKIQYG-GSVAVSGLTG-GGEVPATVYPFILRGVSLLGIDSVYC-PMDVR 154 (167)
T ss_dssp CSSCCCSSCCCCEEEEEESCCT-HHHHHHHTTEEEE-EEEEECCCSS-CSCEEECSHHHHTSCCEEEECCSSSC-CHHHH
T ss_pred hchhhhcccCCCceEEEecCcH-HHHHHHHHHhccC-ceEEEeeccC-CCcccCCHHHHHHCCcEEEEEecCCC-CHHHH
Confidence 2223344444 99999999999 5599999999996 9999999864 445566655544 4899999754332 12334
Q ss_pred HHHHHHH
Q 017431 324 PWLVDKY 330 (371)
Q Consensus 324 ~~~~~~~ 330 (371)
..+.+.+
T Consensus 155 ~~~~~~l 161 (167)
T d1tt7a2 155 AAVWERM 161 (167)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 4444544
|
| >d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=99.54 E-value=2.3e-14 Score=113.58 Aligned_cols=131 Identities=15% Similarity=0.137 Sum_probs=95.1
Q ss_pred cceEEeecC--CCC----eEEEEeeCCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccccceeEEEEEeCCCCC
Q 017431 2 CKAAVAWEP--NKP----LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVT 75 (371)
Q Consensus 2 ~~a~~~~~~--~~~----~~~~~~~~~~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~~G~~v~ 75 (371)
-|++++.+. |.| |++++.++|+|++||||||+++.++++...... ...+...++..+.+|+|++ |+.+
T Consensus 4 ~k~~vl~~~P~G~P~~~~f~l~e~~ip~~~~gevLvk~~~~svDp~~R~~~----~~~~~g~~~~g~~vg~Vv~--S~~~ 77 (147)
T d1v3va1 4 AKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIAS----KRLKEGAVMMGQQVARVVE--SKNS 77 (147)
T ss_dssp EEEEEESSCCCSSCCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHG----GGSCTTSBCCCCEEEEEEE--ESCT
T ss_pred cEEEEEccCCCCCCcccceEEEEEECCCCCCCEEEEEEEEEeEcccccccc----cccccCCccccceEEEEEE--eCCC
Confidence 366777765 444 999999999999999999999999976432211 1112223456688999988 5668
Q ss_pred CCCCCCEEeecCCCCCCCCccccCCCCcccccccCCCccceecCCCccccccCCcceeeccCCcceeeeEEecccceEec
Q 017431 76 EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI 155 (371)
Q Consensus 76 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~l 155 (371)
+|++||+|... ++|++|.+++.+.+.++
T Consensus 78 ~f~~GD~V~g~----------------------------------------------------~gw~ey~v~~~~~l~kv 105 (147)
T d1v3va1 78 AFPAGSIVLAQ----------------------------------------------------SGWTTHFISDGKGLEKL 105 (147)
T ss_dssp TSCTTCEEEEC----------------------------------------------------CCSBSEEEECSSSCEEC
T ss_pred cccCCCEEEEc----------------------------------------------------cCCEeEEEeccceeeEc
Confidence 89999999732 28999999999999999
Q ss_pred CCCCCcc-----hhhhccccchh-hhhhhhhcCCCCCCCEEEE
Q 017431 156 DPQAPLD-----KVCLLGCGVPT-GLGAVWNTAKVEPGSIVAV 192 (371)
Q Consensus 156 P~~~~~~-----~aa~~~~~~~t-a~~~l~~~~~~~~g~~VlI 192 (371)
|++.+.. ..+++....+| ||.++... .+.|++||+
T Consensus 106 ~~~~~~~~~~~~~~~~lG~~Gmtaay~gl~~~--~k~Getvv~ 146 (147)
T d1v3va1 106 LTEWPDKKIQYHEHVTKGFENMPAAFIEMLNG--ANLGKAVVT 146 (147)
T ss_dssp CTTCCTTSSCCCEEEEECGGGHHHHHHHHHTT--CCSSEEEEE
T ss_pred cccccccccchhhhHhccccchHHHHHHhhCC--CCCCCEEEe
Confidence 8765432 34456666666 55566444 467999986
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=99.49 E-value=8.5e-15 Score=101.85 Aligned_cols=73 Identities=18% Similarity=0.213 Sum_probs=66.1
Q ss_pred CCcchhhhccccchhhhhhhh---hcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 017431 159 APLDKVCLLGCGVPTGLGAVW---NTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 232 (371)
Q Consensus 159 ~~~~~aa~~~~~~~ta~~~l~---~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~ 232 (371)
+|+++|+.++++..|||.+++ +....+++++|||+|+ |++|.+++|+++.+|+ +|+++++++++.++++++|+
T Consensus 1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~-~Vi~~t~s~~k~~~~~~lGA 77 (77)
T d1o8ca2 1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGA 77 (77)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTE
T ss_pred CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHHCCC
Confidence 578999999999999988764 4566789999999977 9999999999999999 89999999999999999985
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=98.09 E-value=2.9e-06 Score=66.74 Aligned_cols=97 Identities=21% Similarity=0.213 Sum_probs=72.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE--EecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--FVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~--vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
+..+|+|+|+|.+|+.|++.|+.+|+ .|.+.+.+.++++.++...... .....+ ..+.+.+. .+|++|.+
T Consensus 31 ~pa~V~ViGaGvaG~~A~~~A~~lGA-~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~--~~l~~~~~-----~aDivI~a 102 (168)
T d1pjca1 31 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNS--AEIETAVA-----EADLLIGA 102 (168)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCH--HHHHHHHH-----TCSEEEEC
T ss_pred CCcEEEEECCChHHHHHHHHHhhCCC-EEEEEeCcHHHHHHHHHhhcccceeehhhh--hhHHHhhc-----cCcEEEEe
Confidence 45799999999999999999999999 9999999999998887643321 222222 33333333 48999997
Q ss_pred cCCH-----H-HHHHHHHHhccCCceEEEEccCC
Q 017431 264 IGNV-----S-VMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 264 ~g~~-----~-~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
+=-+ . .-+..++.|+++ ..+|++....
T Consensus 103 alipG~~aP~lIt~~mv~~Mk~G-SVIVDvaidq 135 (168)
T d1pjca1 103 VLVPGRRAPILVPASLVEQMRTG-SVIVDVAVDQ 135 (168)
T ss_dssp CCCTTSSCCCCBCHHHHTTSCTT-CEEEETTCTT
T ss_pred eecCCcccCeeecHHHHhhcCCC-cEEEEeecCC
Confidence 6532 1 247888999997 9999997744
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=98.08 E-value=1e-05 Score=64.41 Aligned_cols=103 Identities=19% Similarity=0.249 Sum_probs=74.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC------------------CCchHHH
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD------------------HDKPIQQ 247 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~------------------~~~~~~~ 247 (371)
+..+|+|+|+|.+|+.|++.|+.+|+ .|.+.|.+.++++.+++++...+....+ ......+
T Consensus 28 ~pa~VvViGaGvaG~~Aa~~A~~lGA-~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~ 106 (183)
T d1l7da1 28 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE 106 (183)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence 45699999999999999999999999 9999999999999999988744311000 0011222
Q ss_pred HHHhhcCCCccEEEEccCCH-----H-HHHHHHHHhccCCceEEEEccCC
Q 017431 248 VLVDLTDGGVDYSFECIGNV-----S-VMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 248 ~~~~~~~gg~dvvid~~g~~-----~-~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
.+.+... ..|++|.++--+ . .-+..++.|++| +.+|++....
T Consensus 107 ~l~~~l~-~aDlVI~talipG~~aP~lit~~mv~~Mk~G-SVIVDvaidq 154 (183)
T d1l7da1 107 AVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPG-SVIIDLAVEA 154 (183)
T ss_dssp HHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTT-CEEEETTGGG
T ss_pred HHHHHHH-hhhhheeeeecCCcccceeehHHHHHhcCCC-cEEEEEeecC
Confidence 2333222 599999866432 1 257888999997 9999997754
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=97.82 E-value=9.2e-05 Score=62.75 Aligned_cols=106 Identities=25% Similarity=0.237 Sum_probs=74.4
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEE-ecCCCCCchHHHHHHhhcC--CCccE
Q 017431 184 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTD--GGVDY 259 (371)
Q Consensus 184 ~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~--gg~dv 259 (371)
.-+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+++.+...+ .|..+ ..+..+.+.+... |++|+
T Consensus 2 ~l~GK~alITGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~G~iDi 79 (248)
T d2d1ya1 2 LFAGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGGAFFQVDLED-ERERVRFVEEAAYALGRVDV 79 (248)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTCEEEECCTTC-HHHHHHHHHHHHHHHSCCCE
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeEEEEeCCC-HHHHHHHHHHHHHhcCCCCe
Confidence 347899999988 8999999999999999 99999999998888888876443 33332 1222223333222 37999
Q ss_pred EEEccCCH-------------------------HHHHHHHHHhcc-CCceEEEEccCC
Q 017431 260 SFECIGNV-------------------------SVMRAALECCHK-GWGTSVIVGVAA 291 (371)
Q Consensus 260 vid~~g~~-------------------------~~~~~~~~~l~~-~~G~iv~~g~~~ 291 (371)
+++++|.. ...+.++..|.+ ++|+||.+++..
T Consensus 80 LVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~ 137 (248)
T d2d1ya1 80 LVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQ 137 (248)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGG
T ss_pred EEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccc
Confidence 99988751 135566666643 238999987643
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=97.68 E-value=7e-05 Score=59.42 Aligned_cols=73 Identities=16% Similarity=0.160 Sum_probs=55.8
Q ss_pred hhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCcEEecCCCCCchHHHHHHhhcCCCc
Q 017431 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGV 257 (371)
Q Consensus 179 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~vi~~~~~~~~~~~~~~~~~~gg~ 257 (371)
.+...+.++++|||+|+|+.+.+++..++..|++++.++.|+.++.+.+. .++... ++... ...+
T Consensus 9 l~~~~~~~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~-~~~~~-------------~~~~ 74 (167)
T d1npya1 9 IEKYHLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAY-INSLE-------------NQQA 74 (167)
T ss_dssp HHHTTCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEE-ESCCT-------------TCCC
T ss_pred HHHcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhh-hhccc-------------ccch
Confidence 35556668899999999999999999999999989999999998776554 455432 22211 1268
Q ss_pred cEEEEccC
Q 017431 258 DYSFECIG 265 (371)
Q Consensus 258 dvvid~~g 265 (371)
|++++|++
T Consensus 75 DliINaTp 82 (167)
T d1npya1 75 DILVNVTS 82 (167)
T ss_dssp SEEEECSS
T ss_pred hhheeccc
Confidence 99999876
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=97.66 E-value=0.00016 Score=61.37 Aligned_cols=105 Identities=18% Similarity=0.204 Sum_probs=72.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCcEEecCCCC-Cc-hHHHHHHhhcC--CCccE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTEFVNPKDH-DK-PIQQVLVDLTD--GGVDY 259 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~g~~~vi~~~~~-~~-~~~~~~~~~~~--gg~dv 259 (371)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+ +.++++....+...+. +. +..+.+.+... +++|+
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi 83 (253)
T d1hxha_ 5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV 83 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCe
Confidence 6899999987 8999999999999999 8999999988765 4456776544322221 12 22222222222 47999
Q ss_pred EEEccCCH-------------------------HHHHHHHHHhccCCceEEEEccCC
Q 017431 260 SFECIGNV-------------------------SVMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 260 vid~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
+++++|.. ...+.++..|...+|+||.+++..
T Consensus 84 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~ 140 (253)
T d1hxha_ 84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVS 140 (253)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGG
T ss_pred EEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchh
Confidence 99998861 135667777765359999998643
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.65 E-value=0.00014 Score=61.71 Aligned_cols=103 Identities=18% Similarity=0.281 Sum_probs=69.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCcEE--ecCCCCCchHHHHHHhhcC--CCccE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEF--VNPKDHDKPIQQVLVDLTD--GGVDY 259 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~-~g~~~v--i~~~~~~~~~~~~~~~~~~--gg~dv 259 (371)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ ++.... .|..+ ..+..+.+.+... +++|+
T Consensus 5 ~GK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~-~~~v~~~~~~~~~~~g~iDi 82 (250)
T d1ydea1 5 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQ-EDDVKTLVSETIRRFGRLDC 82 (250)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTS-HHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEccCCC-HHHHHHHHHHHHHhcCCCCE
Confidence 6899999988 8999999999999999 89999999988776654 443222 23222 1222222222222 37999
Q ss_pred EEEccCCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 260 SFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 260 vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+++++|.. ...+.++..|.+++|++|.+++.
T Consensus 83 lVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~ 139 (250)
T d1ydea1 83 VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSL 139 (250)
T ss_dssp EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCH
T ss_pred EEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccc
Confidence 99988740 13566666676544899998763
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.62 E-value=0.00033 Score=54.83 Aligned_cols=78 Identities=19% Similarity=0.193 Sum_probs=58.8
Q ss_pred hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhH-HHHHhcCCcEEecCCCCCchHHHHHHhhcCCCcc
Q 017431 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF-DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVD 258 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~-~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~d 258 (371)
+..+--++.+|||+|+|.+|.+.++.+...|++.++++.++.++. ++++++|. ..+.+. ++.+.+. .+|
T Consensus 17 ~~~~~l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~-~~~~~~----~~~~~l~-----~~D 86 (159)
T d1gpja2 17 RELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGG-EAVRFD----ELVDHLA-----RSD 86 (159)
T ss_dssp HHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTC-EECCGG----GHHHHHH-----TCS
T ss_pred HHhCCcccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhc-ccccch----hHHHHhc-----cCC
Confidence 333445789999999999999999999999998899999987765 47778885 333332 3433332 499
Q ss_pred EEEEccCCH
Q 017431 259 YSFECIGNV 267 (371)
Q Consensus 259 vvid~~g~~ 267 (371)
+||.|++.+
T Consensus 87 ivi~atss~ 95 (159)
T d1gpja2 87 VVVSATAAP 95 (159)
T ss_dssp EEEECCSSS
T ss_pred EEEEecCCC
Confidence 999999874
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=97.48 E-value=0.00025 Score=59.79 Aligned_cols=102 Identities=26% Similarity=0.392 Sum_probs=69.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcE---EecCCCCCchHHHHHHhhc--CCCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE---FVNPKDHDKPIQQVLVDLT--DGGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~---vi~~~~~~~~~~~~~~~~~--~gg~d 258 (371)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++... ..|..+ ..+..+.+.+.. .|++|
T Consensus 3 ~gK~alITGas~GIG~a~a~~l~~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~iD 80 (243)
T d1q7ba_ 3 EGKIALVTGASRGIGRAIAETLAARGA-KVIGTATSENGAQAISDYLGANGKGLMLNVTD-PASIESVLEKIRAEFGEVD 80 (243)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTC-HHHHHHHHHHHHHHTCSCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCCcEEEEEecC-HHHhhhhhhhhhcccCCcc
Confidence 5899999988 8999999999999999 899999998876644 4555432 233333 122223333322 24799
Q ss_pred EEEEccCCH-------------------------HHHHHHHHHh--ccCCceEEEEccC
Q 017431 259 YSFECIGNV-------------------------SVMRAALECC--HKGWGTSVIVGVA 290 (371)
Q Consensus 259 vvid~~g~~-------------------------~~~~~~~~~l--~~~~G~iv~~g~~ 290 (371)
++++++|.. ...+.+++.| +. +|+||.+++.
T Consensus 81 ilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~II~isS~ 138 (243)
T d1q7ba_ 81 ILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR-HGRIITIGSV 138 (243)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCH
T ss_pred eehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcC-CCEeeeecch
Confidence 999988761 1356666666 34 3999999763
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=97.40 E-value=0.00046 Score=58.49 Aligned_cols=104 Identities=26% Similarity=0.283 Sum_probs=68.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHH-HHhcCCcEE---ecCCCCCchHHHHHHhhcC--CCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR-AKNFGVTEF---VNPKDHDKPIQQVLVDLTD--GGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~-~~~~g~~~v---i~~~~~~~~~~~~~~~~~~--gg~d 258 (371)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+. +++++.... .|..+ ..+..+.+.+... +++|
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~iD 81 (254)
T d1hdca_ 4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTI-EEDWQRVVAYAREEFGSVD 81 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEcccCC-HHHHHHHHHHHHHHcCCcc
Confidence 6899999988 8999999998888999 89999998877654 456664332 23322 1222222322222 3799
Q ss_pred EEEEccCCH-------------------------HHHHHHHHHhc-cCCceEEEEccCC
Q 017431 259 YSFECIGNV-------------------------SVMRAALECCH-KGWGTSVIVGVAA 291 (371)
Q Consensus 259 vvid~~g~~-------------------------~~~~~~~~~l~-~~~G~iv~~g~~~ 291 (371)
++++++|.. ...+.+++.|. .++|+||.+++..
T Consensus 82 ilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~ 140 (254)
T d1hdca_ 82 GLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAA 140 (254)
T ss_dssp EEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred EEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccch
Confidence 999988751 13445555443 2249999998643
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=97.37 E-value=3.7e-05 Score=63.61 Aligned_cols=101 Identities=18% Similarity=0.182 Sum_probs=70.0
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH----HHHhcCCcEEecCCCCCchHHHHHHhhc
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD----RAKNFGVTEFVNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~----~~~~~g~~~vi~~~~~~~~~~~~~~~~~ 253 (371)
+.....+++|++||.+|+| .|..++.+++..|. +|++++.+++-.+ .++++|.+.+..... +. .....
T Consensus 70 ml~~L~l~~g~~VLeIGsG-sGY~taila~l~g~-~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~g---d~---~~g~~ 141 (215)
T d1jg1a_ 70 MLEIANLKPGMNILEVGTG-SGWNAALISEIVKT-DVYTIERIPELVEFAKRNLERAGVKNVHVILG---DG---SKGFP 141 (215)
T ss_dssp HHHHHTCCTTCCEEEECCT-TSHHHHHHHHHHCS-CEEEEESCHHHHHHHHHHHHHTTCCSEEEEES---CG---GGCCG
T ss_pred HHHhhccCccceEEEecCC-CChhHHHHHHhhCc-eeEEEeccHHHHHHHHHHHHHcCCceeEEEEC---cc---ccCCc
Confidence 4567789999999999886 47777788887785 7999999886444 445577655432211 00 01111
Q ss_pred C-CCccEEEEccCCHHHHHHHHHHhccCCceEEEE
Q 017431 254 D-GGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 254 ~-gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
. +.||.|+-+.+-+......++.|++| |++|..
T Consensus 142 ~~~pfD~Iiv~~a~~~ip~~l~~qL~~g-GrLv~p 175 (215)
T d1jg1a_ 142 PKAPYDVIIVTAGAPKIPEPLIEQLKIG-GKLIIP 175 (215)
T ss_dssp GGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred ccCcceeEEeecccccCCHHHHHhcCCC-CEEEEE
Confidence 2 37999987766656567888999997 999864
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.36 E-value=0.00078 Score=56.87 Aligned_cols=103 Identities=18% Similarity=0.314 Sum_probs=68.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-----HHHhcCCcEE---ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-----RAKNFGVTEF---VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~-----~~~~~g~~~v---i~~~~~~~~~~~~~~~~~~-- 254 (371)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+ +.+++|.... .|..+ ..+....+.+...
T Consensus 4 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 81 (251)
T d1vl8a_ 4 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN-YEEVKKLLEAVKEKF 81 (251)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCC-HHHHHHHHHHHHHHc
Confidence 5899999988 8999999999999999 8999999887653 2344565432 23333 1222222222222
Q ss_pred CCccEEEEccCCH-------------------------HHHHHHHHHhcc-CCceEEEEccC
Q 017431 255 GGVDYSFECIGNV-------------------------SVMRAALECCHK-GWGTSVIVGVA 290 (371)
Q Consensus 255 gg~dvvid~~g~~-------------------------~~~~~~~~~l~~-~~G~iv~~g~~ 290 (371)
|++|++++++|.. ...+.++..|.+ ++|++|.+++.
T Consensus 82 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~ 143 (251)
T d1vl8a_ 82 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSL 143 (251)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCG
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccc
Confidence 3799999998861 245666777743 23899999763
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=97.36 E-value=0.0014 Score=55.51 Aligned_cols=104 Identities=16% Similarity=0.205 Sum_probs=67.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE---ecCCCCCchHHHH---HHhhcC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQV---LVDLTD 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~---~~~~~~ 254 (371)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++.+.... .|..+ ..+..+. +.+..+
T Consensus 7 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~~ 84 (259)
T d2ae2a_ 7 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSS-RSERQELMNTVANHFH 84 (259)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCC-HHHHHHHHHHHHHHhC
Confidence 6899999988 8999999998889999 899999998876533 23444332 23222 1222222 223333
Q ss_pred CCccEEEEccCCH-------------------------HHHHHHHHHhc-cCCceEEEEccCC
Q 017431 255 GGVDYSFECIGNV-------------------------SVMRAALECCH-KGWGTSVIVGVAA 291 (371)
Q Consensus 255 gg~dvvid~~g~~-------------------------~~~~~~~~~l~-~~~G~iv~~g~~~ 291 (371)
+.+|+++++.|.. ...+.++..|. .++|++|.+++..
T Consensus 85 ~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~ 147 (259)
T d2ae2a_ 85 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVS 147 (259)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGG
T ss_pred CCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccc
Confidence 3699999998851 12345555553 2249999997643
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.36 E-value=0.00068 Score=56.99 Aligned_cols=78 Identities=22% Similarity=0.229 Sum_probs=55.9
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEE--ecCCCCCchHHHHHHhhcCCCccEE
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF--VNPKDHDKPIQQVLVDLTDGGVDYS 260 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~v--i~~~~~~~~~~~~~~~~~~gg~dvv 260 (371)
-+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++.... .|..+ .+-.+.+.+.. +++|++
T Consensus 5 L~GK~~lITGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~-g~iDil 80 (244)
T d1pr9a_ 5 LAGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLGD--WEATERALGSV-GPVDLL 80 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTC--HHHHHHHHTTC-CCCCEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCC--HHHHHHHHHHh-CCceEE
Confidence 47899999988 9999999999999999 899999998886644 45554332 33333 33333333322 379999
Q ss_pred EEccCC
Q 017431 261 FECIGN 266 (371)
Q Consensus 261 id~~g~ 266 (371)
+++.|.
T Consensus 81 VnnAg~ 86 (244)
T d1pr9a_ 81 VNNAAV 86 (244)
T ss_dssp EECCCC
T ss_pred Eecccc
Confidence 998876
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=97.30 E-value=0.0026 Score=53.37 Aligned_cols=103 Identities=17% Similarity=0.263 Sum_probs=67.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh--HHHHHhcCCcEE---ecCCCCCchHHHHHHhhcC--CCc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK--FDRAKNFGVTEF---VNPKDHDKPIQQVLVDLTD--GGV 257 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~--~~~~~~~g~~~v---i~~~~~~~~~~~~~~~~~~--gg~ 257 (371)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++ .+.++++|.... .|..+ ..+....+.+... |++
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~-~~~v~~~~~~~~~~~G~i 81 (247)
T d2ew8a1 4 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQ-PGDVEAFGKQVISTFGRC 81 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHHHcCCcEEEEEeeCCC-HHHHHHHHHHHHHHcCCC
Confidence 5799999988 8999999999999999 89988876543 345566775432 23333 1222233333222 479
Q ss_pred cEEEEccCCH-------------------------HHHHHHHHHhc-cCCceEEEEccC
Q 017431 258 DYSFECIGNV-------------------------SVMRAALECCH-KGWGTSVIVGVA 290 (371)
Q Consensus 258 dvvid~~g~~-------------------------~~~~~~~~~l~-~~~G~iv~~g~~ 290 (371)
|++++++|.. ...+.+++.|. .++|++|.+++.
T Consensus 82 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~ 140 (247)
T d2ew8a1 82 DILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTST 140 (247)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred CEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccc
Confidence 9999988861 13445555553 224899998764
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=97.30 E-value=0.001 Score=56.50 Aligned_cols=102 Identities=21% Similarity=0.380 Sum_probs=67.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~~--g 255 (371)
+|+++||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+ ++.|.... .|..+ ..+..+.+.+... |
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g 81 (260)
T d1zema1 4 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTS-EEAVIGTVDSVVRDFG 81 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 6899999988 8999999999999999 899999998876543 33454332 23222 1222222322222 4
Q ss_pred CccEEEEccCCH--------------------------HHHHHHHHHh--ccCCceEEEEccC
Q 017431 256 GVDYSFECIGNV--------------------------SVMRAALECC--HKGWGTSVIVGVA 290 (371)
Q Consensus 256 g~dvvid~~g~~--------------------------~~~~~~~~~l--~~~~G~iv~~g~~ 290 (371)
++|+++++.|.. .+.+.+++.| +. +|++|.+++.
T Consensus 82 ~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~II~isS~ 143 (260)
T d1zema1 82 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASM 143 (260)
T ss_dssp CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCH
T ss_pred CCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhc-CCCCCeeech
Confidence 799999988741 1345555544 35 4999999763
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=97.30 E-value=2e-05 Score=65.35 Aligned_cols=102 Identities=19% Similarity=0.224 Sum_probs=70.4
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----cCCcEEecCCCCCchHHHHHHhh
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDL 252 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~v~~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~ 252 (371)
+....++++|++||-+|+|. |..++.+|+..|. .+|++++.+++..+.+++ .+...+..... +. ....
T Consensus 67 ~l~~l~l~~g~~VLdiG~Gt-G~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~---d~---~~~~ 139 (213)
T d1dl5a1 67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG---DG---YYGV 139 (213)
T ss_dssp HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES---CG---GGCC
T ss_pred HHHhhhccccceEEEecCcc-chhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccC---ch---HHcc
Confidence 45778899999999999874 8888889998873 389999999987766653 34433221111 00 0011
Q ss_pred c-CCCccEEEEccCCHHHHHHHHHHhccCCceEEEE
Q 017431 253 T-DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 253 ~-~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
. .+.||+|+...+-.+..+..++.|++| |++|..
T Consensus 140 ~~~~~fD~I~~~~~~~~~p~~l~~~LkpG-G~lv~p 174 (213)
T d1dl5a1 140 PEFSPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP 174 (213)
T ss_dssp GGGCCEEEEEECSBBSCCCHHHHHHEEEE-EEEEEE
T ss_pred ccccchhhhhhhccHHHhHHHHHHhcCCC-cEEEEE
Confidence 1 136999998766555557788999997 999863
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=97.28 E-value=0.00036 Score=55.28 Aligned_cols=77 Identities=12% Similarity=0.122 Sum_probs=53.8
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcC---CcEEecCCCCCchHHHHHHhhc
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFG---VTEFVNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g---~~~vi~~~~~~~~~~~~~~~~~ 253 (371)
|.+..-..+|++|||+|+|+.+.+++..+..+|+ +++.+.|+.++.+.+. .+. ....+... +..
T Consensus 9 l~~~~~~~~~k~vlIlGaGGaarai~~al~~~g~-~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~-----------~~~ 76 (170)
T d1nyta1 9 LERLSFIRPGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALSMD-----------ELE 76 (170)
T ss_dssp HHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECCSG-----------GGT
T ss_pred HHHcCCCCCCCEEEEECCcHHHHHHHHHhcccce-EEEeccchHHHHHHHHHHHhhcccccccccc-----------ccc
Confidence 4344445678999999999999999999999999 7999999988766543 332 21122111 111
Q ss_pred CCCccEEEEccCC
Q 017431 254 DGGVDYSFECIGN 266 (371)
Q Consensus 254 ~gg~dvvid~~g~ 266 (371)
...+|++++|++-
T Consensus 77 ~~~~dliIN~Tp~ 89 (170)
T d1nyta1 77 GHEFDLIINATSS 89 (170)
T ss_dssp TCCCSEEEECCSC
T ss_pred ccccceeeccccc
Confidence 2379999999865
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=97.28 E-value=0.00042 Score=58.27 Aligned_cols=79 Identities=20% Similarity=0.293 Sum_probs=55.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEE-ecCCCCCchHHHHHHhhcC--CCccEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF-VNPKDHDKPIQQVLVDLTD--GGVDYS 260 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~v-i~~~~~~~~~~~~~~~~~~--gg~dvv 260 (371)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++...+ .|..+ ..+..+.+.+... +++|++
T Consensus 4 ~gK~~lITGas~GIG~aia~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~iDil 81 (242)
T d1ulsa_ 4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVMDVAD-PASVERGFAEALAHLGRLDGV 81 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEEECCTTC-HHHHHHHHHHHHHHHSSCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCeEEEEecCC-HHHHHHHHHHHHHhcCCceEE
Confidence 5899999988 8999999999999999 899999999887655 45665433 23333 1223333323222 379999
Q ss_pred EEccCC
Q 017431 261 FECIGN 266 (371)
Q Consensus 261 id~~g~ 266 (371)
++++|.
T Consensus 82 VnnAG~ 87 (242)
T d1ulsa_ 82 VHYAGI 87 (242)
T ss_dssp EECCCC
T ss_pred EECCcc
Confidence 998876
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.27 E-value=0.0015 Score=54.77 Aligned_cols=106 Identities=23% Similarity=0.251 Sum_probs=69.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhc--C
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--D 254 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~--~ 254 (371)
-.|+++||+|+ +++|.+.+.-+...|+ +|+.+++++++.+.+ ++.|.... .|..+ .......+.... .
T Consensus 5 l~Gkv~lITGas~GIG~~ia~~la~~G~-~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~-~~~v~~~~~~i~~~~ 82 (244)
T d1yb1a_ 5 VTGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSN-REDIYSSAKKVKAEI 82 (244)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHHc
Confidence 36899999988 8999998888888899 899999999876543 34554322 23333 122222233222 2
Q ss_pred CCccEEEEccCCH-------------------------HHHHHHHHHhcc-CCceEEEEccCCC
Q 017431 255 GGVDYSFECIGNV-------------------------SVMRAALECCHK-GWGTSVIVGVAAS 292 (371)
Q Consensus 255 gg~dvvid~~g~~-------------------------~~~~~~~~~l~~-~~G~iv~~g~~~~ 292 (371)
|.+|++++++|.. .+.+.++..|.+ ++|++|.+++...
T Consensus 83 g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~ 146 (244)
T d1yb1a_ 83 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAG 146 (244)
T ss_dssp CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-
T ss_pred CCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchh
Confidence 4799999998871 134555665643 3488998877543
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.26 E-value=0.001 Score=55.79 Aligned_cols=77 Identities=19% Similarity=0.161 Sum_probs=54.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEE--ecCCCCCchHHHHHHhhcCCCccEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF--VNPKDHDKPIQQVLVDLTDGGVDYSF 261 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~v--i~~~~~~~~~~~~~~~~~~gg~dvvi 261 (371)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++.... .|..+ .+..+.+.+.. |++|+++
T Consensus 4 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~-g~iDilV 79 (242)
T d1cyda_ 4 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDLGD--WDATEKALGGI-GPVDLLV 79 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTC--HHHHHHHHTTC-CCCSEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCC--HHHHHHHHHHc-CCCeEEE
Confidence 6899999988 8999999999999999 899999998876544 45544332 23333 33223322222 4799999
Q ss_pred EccCC
Q 017431 262 ECIGN 266 (371)
Q Consensus 262 d~~g~ 266 (371)
+++|.
T Consensus 80 nnAg~ 84 (242)
T d1cyda_ 80 NNAAL 84 (242)
T ss_dssp ECCCC
T ss_pred ECCcc
Confidence 98875
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=97.26 E-value=0.0013 Score=55.65 Aligned_cols=104 Identities=15% Similarity=0.197 Sum_probs=65.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcE---EecCCCCCchHHH---HHHhhcC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE---FVNPKDHDKPIQQ---VLVDLTD 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~---vi~~~~~~~~~~~---~~~~~~~ 254 (371)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +.+... ..|..+ ..+... .+.+..+
T Consensus 7 kgK~alVTGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~~ 84 (259)
T d1xq1a_ 7 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASL-RPEREKLMQTVSSMFG 84 (259)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCC-HHHHHHHHHHHHHHhC
Confidence 6899999988 8999999999999999 8999999987765432 233322 123332 122222 2333334
Q ss_pred CCccEEEEccCCH-------------------------HHHHHHHHHhc-cCCceEEEEccCC
Q 017431 255 GGVDYSFECIGNV-------------------------SVMRAALECCH-KGWGTSVIVGVAA 291 (371)
Q Consensus 255 gg~dvvid~~g~~-------------------------~~~~~~~~~l~-~~~G~iv~~g~~~ 291 (371)
|.+|+++++.|.. ...+.++..|. .++|+||.+++..
T Consensus 85 g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~ 147 (259)
T d1xq1a_ 85 GKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIA 147 (259)
T ss_dssp TCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC---
T ss_pred CCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccc
Confidence 5799999998861 12455555553 2248999987643
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=97.25 E-value=0.0009 Score=53.94 Aligned_cols=78 Identities=21% Similarity=0.219 Sum_probs=55.1
Q ss_pred CCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-----cCC-cEEecCCCCCchHHHHHHhhcC
Q 017431 182 AKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-----FGV-TEFVNPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 182 ~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~-----~g~-~~vi~~~~~~~~~~~~~~~~~~ 254 (371)
..--+|++|||+|+ |++|.+..+.+...|+ +|+.++++.++.+.+.+ ... ....+..+ . +.+.+..
T Consensus 18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~--~---~~~~~~~- 90 (191)
T d1luaa1 18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETAD--D---ASRAEAV- 90 (191)
T ss_dssp TSCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCS--H---HHHHHHT-
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHhhcc-chhhcccchHHHHHHHHHHHhccchhhhhhhccc--H---HHHHHHh-
Confidence 44558999999987 9999999999999999 89999999887654432 222 22333333 1 2333332
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+++|++|++.|.
T Consensus 91 ~~iDilin~Ag~ 102 (191)
T d1luaa1 91 KGAHFVFTAGAI 102 (191)
T ss_dssp TTCSEEEECCCT
T ss_pred cCcCeeeecCcc
Confidence 379999999874
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=97.23 E-value=0.00079 Score=57.10 Aligned_cols=79 Identities=22% Similarity=0.281 Sum_probs=55.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHH----HHhcCCcEE---ecCCCCCch---HHHHHHhhcC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR----AKNFGVTEF---VNPKDHDKP---IQQVLVDLTD 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~----~~~~g~~~v---i~~~~~~~~---~~~~~~~~~~ 254 (371)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+. +++.+.... .|..+ ..+ +.+.+.+..+
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~-~~~~~~~~~~~~~~~~ 82 (258)
T d1ae1a_ 5 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLS-RTERDKLMQTVAHVFD 82 (258)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCC-HHHHHHHHHHHHHHhC
Confidence 7899999987 9999999999999999 89999999876543 344555442 23333 122 2233444544
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
+..|+++++.|.
T Consensus 83 g~idilinnag~ 94 (258)
T d1ae1a_ 83 GKLNILVNNAGV 94 (258)
T ss_dssp SCCCEEEECCCC
T ss_pred CCcEEEeccccc
Confidence 579999998886
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.21 E-value=9.3e-05 Score=62.21 Aligned_cols=97 Identities=18% Similarity=0.183 Sum_probs=63.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC-CCc----hHHHHHHhhcCC-Ccc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD-HDK----PIQQVLVDLTDG-GVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~-~~~----~~~~~~~~~~~g-g~d 258 (371)
+|++|||+|+ +++|.+.++.+...|+ +|+.++..+.... ......... ... .....+.+..+. ++|
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~-~V~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD 73 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEA------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVD 73 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTS------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCccccc------cccceeecccCcHHHHHHHHHHHHHHhCCCCce
Confidence 4799999988 9999999999999999 8998877655321 111111111 101 122233333344 799
Q ss_pred EEEEccCC--------------------------HHHHHHHHHHhccCCceEEEEccC
Q 017431 259 YSFECIGN--------------------------VSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 259 vvid~~g~--------------------------~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
++++++|. -...+.+++.|.++ |++|.+++.
T Consensus 74 ~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-G~Iv~isS~ 130 (236)
T d1dhra_ 74 AILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG-GLLTLAGAK 130 (236)
T ss_dssp EEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCG
T ss_pred EEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccc-cceeEEccH
Confidence 99998874 01345566778886 999999764
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.20 E-value=0.00084 Score=57.28 Aligned_cols=106 Identities=20% Similarity=0.171 Sum_probs=66.8
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-----cCCcEE-ecCCCCCchHHHHHHh-hc--C
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-----FGVTEF-VNPKDHDKPIQQVLVD-LT--D 254 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~-----~g~~~v-i~~~~~~~~~~~~~~~-~~--~ 254 (371)
-+|+++||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+.+ .+.... +.....+......+.+ .. .
T Consensus 12 L~GK~alITGassGIG~aiA~~la~~G~-~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 90 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM 90 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence 57899999988 8999999888888999 99999999988765432 333221 2111111222222222 11 2
Q ss_pred CCccEEEEccCCH-------------------------HHHHHHHHHhccCCceEEEEccCC
Q 017431 255 GGVDYSFECIGNV-------------------------SVMRAALECCHKGWGTSVIVGVAA 291 (371)
Q Consensus 255 gg~dvvid~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~g~~~ 291 (371)
+..|+++++.|.. .+.+.++..|..+.|+++.+++..
T Consensus 91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~ 152 (269)
T d1xu9a_ 91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLA 152 (269)
T ss_dssp TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGG
T ss_pred CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccch
Confidence 3689888876651 134555555654348999887643
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=97.18 E-value=0.004 Score=45.27 Aligned_cols=93 Identities=16% Similarity=-0.001 Sum_probs=63.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~--~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
.|++|||+|+|.+|..-++.+...|+ +|++++.... -.+++++-.. .... ..+... .+ .++++++.+
T Consensus 11 ~~k~vlVvG~G~va~~ka~~ll~~ga-~v~v~~~~~~~~~~~~~~~~~i-~~~~-~~~~~~------dl--~~~~lv~~a 79 (113)
T d1pjqa1 11 RDRDCLIVGGGDVAERKARLLLEAGA-RLTVNALTFIPQFTVWANEGML-TLVE-GPFDET------LL--DSCWLAIAA 79 (113)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTB-EEEEEESSCCHHHHHHHTTTSC-EEEE-SSCCGG------GG--TTCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeccCChHHHHHHhcCCc-eeec-cCCCHH------Hh--CCCcEEeec
Confidence 47899999999999999999999999 7777755432 2334333222 2221 111111 11 269999999
Q ss_pred cCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 264 IGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 264 ~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
++.+..-....+..++. |.+|-+.+.
T Consensus 80 t~d~~~n~~i~~~a~~~-~ilVNv~D~ 105 (113)
T d1pjqa1 80 TDDDTVNQRVSDAAESR-RIFCNVVDA 105 (113)
T ss_dssp CSCHHHHHHHHHHHHHT-TCEEEETTC
T ss_pred CCCHHHHHHHHHHHHHc-CCEEEeCCC
Confidence 99977666777777885 999877553
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.16 E-value=0.0012 Score=55.81 Aligned_cols=79 Identities=22% Similarity=0.357 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCC-cEE----ecCCCCCchHHHHHHhhcC-
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGV-TEF----VNPKDHDKPIQQVLVDLTD- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~-~~v----i~~~~~~~~~~~~~~~~~~- 254 (371)
+|+++||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+ ++.+. ..+ .|-.+ .++....+.....
T Consensus 9 k~Kv~lITGas~GIG~aiA~~la~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~-~~~v~~~v~~~~~~ 86 (257)
T d1xg5a_ 9 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN-EEDILSMFSAIRSQ 86 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCC-HHHHHHHHHHHHHh
Confidence 5789999988 8999999998889999 899999998876543 22332 122 23332 1222222222222
Q ss_pred -CCccEEEEccCC
Q 017431 255 -GGVDYSFECIGN 266 (371)
Q Consensus 255 -gg~dvvid~~g~ 266 (371)
+++|++++++|.
T Consensus 87 ~g~iD~lVnnAg~ 99 (257)
T d1xg5a_ 87 HSGVDICINNAGL 99 (257)
T ss_dssp HCCCSEEEECCCC
T ss_pred cCCCCEEEecccc
Confidence 479999998886
|
| >d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein Ta0852 species: Thermoplasma acidophilum [TaxId: 2303]
Probab=97.15 E-value=0.00036 Score=58.84 Aligned_cols=102 Identities=14% Similarity=0.161 Sum_probs=68.3
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----cC-CcEE-ecCCCCCchHHHHHH
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FG-VTEF-VNPKDHDKPIQQVLV 250 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~v~~v~~~~~~~~~~~~----~g-~~~v-i~~~~~~~~~~~~~~ 250 (371)
+....+++||++||=.|+| .|.++..+|++.|. .+|++++.+++..+.+++ ++ ...+ +...+ + .
T Consensus 77 Ii~~l~i~pG~rVLEiG~G-sG~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~D----i----~ 147 (250)
T d1yb2a1 77 IIMRCGLRPGMDILEVGVG-SGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSD----I----A 147 (250)
T ss_dssp ----CCCCTTCEEEEECCT-TSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSC----T----T
T ss_pred HHHHcCCCCcCEEEEeeee-CcHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEee----e----e
Confidence 3467889999999999886 36777788888763 389999999988877764 22 2222 11222 1 1
Q ss_pred hhcCC-CccEEE-EccCCHHHHHHHHHHhccCCceEEEEcc
Q 017431 251 DLTDG-GVDYSF-ECIGNVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 251 ~~~~g-g~dvvi-d~~g~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
+.... .||.|+ |.......++.+.+.|++| |+++.+..
T Consensus 148 ~~~~~~~fD~V~ld~p~p~~~l~~~~~~LKpG-G~lv~~~P 187 (250)
T d1yb2a1 148 DFISDQMYDAVIADIPDPWNHVQKIASMMKPG-SVATFYLP 187 (250)
T ss_dssp TCCCSCCEEEEEECCSCGGGSHHHHHHTEEEE-EEEEEEES
T ss_pred cccccceeeeeeecCCchHHHHHHHHHhcCCC-ceEEEEeC
Confidence 22223 799887 4444446689999999997 99987743
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=97.14 E-value=0.0013 Score=55.00 Aligned_cols=103 Identities=20% Similarity=0.313 Sum_probs=69.7
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCcEEe---cCCCCCchHHHHHHhhcC--CCc
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTEFV---NPKDHDKPIQQVLVDLTD--GGV 257 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~g~~~vi---~~~~~~~~~~~~~~~~~~--gg~ 257 (371)
-+|+++||+|+ +++|.+.++-+...|+ +|+.+.+++++.+ ..++++..... |-.+ ..+..+.+.+... +++
T Consensus 3 l~gK~alItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~-~~~i~~~~~~i~~~~g~i 80 (241)
T d2a4ka1 3 LSGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSD-PKAVEAVFAEALEEFGRL 80 (241)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTS-HHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCceEEEEecCCC-HHHHHHHHHHHHHHhCCc
Confidence 36899999988 8999999999999999 9999999988765 44567764432 2222 1223233333322 379
Q ss_pred cEEEEccCCH-------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 258 DYSFECIGNV-------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 258 dvvid~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
|+.+++++.. ...+..+..+..+ +.++.++..
T Consensus 81 DiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~-~~i~~~ss~ 137 (241)
T d2a4ka1 81 HGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG-GSLVLTGSV 137 (241)
T ss_dssp CEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT-CEEEEECCC
T ss_pred cEeccccccccccchhhhhccccccccccccccccccccccccccccc-cceeecccc
Confidence 9999987751 1345566677775 777766553
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.13 E-value=0.00074 Score=56.81 Aligned_cols=80 Identities=19% Similarity=0.218 Sum_probs=56.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
-+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+....+....+-...+..+...+.. ++.|+++++
T Consensus 4 l~gK~alITGas~GIG~aia~~la~~G~-~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~id~lVn~ 81 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEV-ERLDVLFNV 81 (245)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHC-SCCSEEEEC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhccCCceeeeecccccccccccccc-ccceeEEec
Confidence 36899999988 9999999999999999 99999999888766555433232211111244444444432 379999998
Q ss_pred cCC
Q 017431 264 IGN 266 (371)
Q Consensus 264 ~g~ 266 (371)
.|.
T Consensus 82 ag~ 84 (245)
T d2ag5a1 82 AGF 84 (245)
T ss_dssp CCC
T ss_pred ccc
Confidence 886
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.07 E-value=0.00061 Score=57.32 Aligned_cols=105 Identities=16% Similarity=0.168 Sum_probs=69.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEE---ecCCCCCchHHHHHHhhcC--CCc
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF---VNPKDHDKPIQQVLVDLTD--GGV 257 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~v---i~~~~~~~~~~~~~~~~~~--gg~ 257 (371)
-+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++.... .|..+ ..+..+.+.+... +++
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~i 81 (244)
T d1nffa_ 4 LTGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQ-PAQWKAAVDTAVTAFGGL 81 (244)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTC-HHHHHHHHHHHHHHHSCC
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhCcceEEEeecCC-HHHHHHHHHHHHHHhCCC
Confidence 46899999988 8999999999999999 899999999877644 45554332 23322 1222233333322 379
Q ss_pred cEEEEccCCH-------------------------HHHHHHHHHhc-cCCceEEEEccCC
Q 017431 258 DYSFECIGNV-------------------------SVMRAALECCH-KGWGTSVIVGVAA 291 (371)
Q Consensus 258 dvvid~~g~~-------------------------~~~~~~~~~l~-~~~G~iv~~g~~~ 291 (371)
|++++++|.. ...+.++..|. .++|+||.+++..
T Consensus 82 dilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~ 141 (244)
T d1nffa_ 82 HVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIE 141 (244)
T ss_dssp CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred eEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccc
Confidence 9999998861 12344545553 2248999997743
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=97.05 E-value=0.0015 Score=52.06 Aligned_cols=41 Identities=17% Similarity=0.283 Sum_probs=36.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD 225 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~ 225 (371)
-++++|||+|+|+.+.+++..+...|+++++.+.+++++.+
T Consensus 16 l~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~ 56 (182)
T d1vi2a1 16 IKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFD 56 (182)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHH
T ss_pred cCCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHH
Confidence 47799999999999999999999999989999999876554
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.03 E-value=0.0018 Score=54.52 Aligned_cols=102 Identities=18% Similarity=0.241 Sum_probs=66.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhc--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~--~g 255 (371)
.++++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++.|.... .|..+ ..+..+.+.+.. .|
T Consensus 9 enKvalITGas~GIG~a~a~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~-~~~v~~~~~~~~~~~g 86 (251)
T d2c07a1 9 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSK-KEEISEVINKILTEHK 86 (251)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTC-HHHHHHHHHHHHHHCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHhcC
Confidence 4789999988 8999999888888899 899999988776533 34554332 23332 122222222222 24
Q ss_pred CccEEEEccCCH-------------------------HHHHHHHHHh--ccCCceEEEEccC
Q 017431 256 GVDYSFECIGNV-------------------------SVMRAALECC--HKGWGTSVIVGVA 290 (371)
Q Consensus 256 g~dvvid~~g~~-------------------------~~~~~~~~~l--~~~~G~iv~~g~~ 290 (371)
++|+++++.|.. ...+.++..| .. +|+||.+++.
T Consensus 87 ~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~ 147 (251)
T d2c07a1 87 NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSI 147 (251)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCT
T ss_pred CceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCC-CeEEEEECCH
Confidence 899999988761 1244455555 34 4999999763
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=97.02 E-value=0.00056 Score=57.99 Aligned_cols=79 Identities=25% Similarity=0.339 Sum_probs=56.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCcEE---ecCCCCCchHHHHHHhhcC--CCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTEF---VNPKDHDKPIQQVLVDLTD--GGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~g~~~v---i~~~~~~~~~~~~~~~~~~--gg~d 258 (371)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+ .++++|.... .|..+ ..+..+.+.+... |++|
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~-~~~v~~~~~~~~~~~g~iD 81 (256)
T d1k2wa_ 4 DGKTALITGSARGIGRAFAEAYVREGA-RVAIADINLEAARATAAEIGPAACAIALDVTD-QASIDRCVAELLDRWGSID 81 (256)
T ss_dssp TTEEEEEETCSSHHHHHHHHHHHHTTE-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEeeCCC-HHHHHHHHHHHHHHhCCcc
Confidence 5889999988 9999999999999999 8999999887765 4567776443 23333 1222222333222 4799
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
+++++.|.
T Consensus 82 ilVnnAg~ 89 (256)
T d1k2wa_ 82 ILVNNAAL 89 (256)
T ss_dssp EEEECCCC
T ss_pred EEEeeccc
Confidence 99998885
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.02 E-value=0.0021 Score=54.20 Aligned_cols=103 Identities=20% Similarity=0.221 Sum_probs=66.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc----CCcE----EecCCCCCchHHHHHHhhcC-
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF----GVTE----FVNPKDHDKPIQQVLVDLTD- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~----g~~~----vi~~~~~~~~~~~~~~~~~~- 254 (371)
.|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. ++ +... ..|..+ ..+..+.+.+...
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~ 79 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD-QQQLRDTFRKVVDH 79 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTS-HHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCC-HHHHHHHHHHHHHH
Confidence 5899999988 8999999999999999 8999999988765432 22 2111 123333 1223333333322
Q ss_pred -CCccEEEEccCCH-----------------HHHHHHHHHhccC----CceEEEEccC
Q 017431 255 -GGVDYSFECIGNV-----------------SVMRAALECCHKG----WGTSVIVGVA 290 (371)
Q Consensus 255 -gg~dvvid~~g~~-----------------~~~~~~~~~l~~~----~G~iv~~g~~ 290 (371)
|++|++++++|.. .....+++.|.+. .|+||.+++.
T Consensus 80 ~G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~ 137 (254)
T d2gdza1 80 FGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSL 137 (254)
T ss_dssp HSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG
T ss_pred cCCcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccH
Confidence 3799999998861 1244555555431 2789998764
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=96.99 E-value=0.0021 Score=50.70 Aligned_cols=97 Identities=10% Similarity=0.015 Sum_probs=63.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
++++|||+|||.+|...++.+...|. +|++++++.++.+.+.+ ++...+.............. . ...|+++.+.
T Consensus 1 ~~K~IliiGaG~~G~~~a~~L~~~g~-~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~--i--~~~~~~i~~~ 75 (182)
T d1e5qa1 1 ATKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAE--V--AKHDLVISLI 75 (182)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHH--H--TTSSEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECChHHHHHHHhcccccccccccccchhhhHhh--h--hccceeEeec
Confidence 36899999999999999998888899 89999999998876654 44433322221111111111 1 1578888877
Q ss_pred CCHHHHHHHHHHhccCCceEEEEc
Q 017431 265 GNVSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 265 g~~~~~~~~~~~l~~~~G~iv~~g 288 (371)
...........++..+ ..++...
T Consensus 76 ~~~~~~~~~~~~~~~~-~~~~~~~ 98 (182)
T d1e5qa1 76 PYTFHATVIKSAIRQK-KHVVTTS 98 (182)
T ss_dssp CGGGHHHHHHHHHHHT-CEEECSS
T ss_pred cchhhhHHHHHHHhhc-cceeecc
Confidence 7655455555556664 5665543
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=96.98 E-value=0.0022 Score=54.63 Aligned_cols=103 Identities=21% Similarity=0.241 Sum_probs=68.3
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hhHH----HHHhcCCcEEe---cCCCCCchHHHHHHhhcC-
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKFD----RAKNFGVTEFV---NPKDHDKPIQQVLVDLTD- 254 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~-~~~~----~~~~~g~~~vi---~~~~~~~~~~~~~~~~~~- 254 (371)
-+|+++||+|+ +++|.+.++.+...|+ +|+.++++. +..+ .+++.+.+... |..+ ..+..+.+.+...
T Consensus 16 L~gK~~lITGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~-~~~v~~~~~~~~~~ 93 (272)
T d1g0oa_ 16 LEGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGV-VEDIVRMFEEAVKI 93 (272)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCC-HHHHHHHHHHHHHH
Confidence 35799999988 9999999999999999 888876653 3322 33455654432 2222 1233333333322
Q ss_pred -CCccEEEEccCCH-------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 255 -GGVDYSFECIGNV-------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 255 -gg~dvvid~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+++|+++++.+.. ...+.++..|..+ |+++.+++.
T Consensus 94 ~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~-g~~i~i~s~ 154 (272)
T d1g0oa_ 94 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG-GRLILMGSI 154 (272)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT-CEEEEECCG
T ss_pred hCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccc-ccccccccc
Confidence 3799999988761 2367777788886 888888654
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=96.95 E-value=0.00017 Score=60.42 Aligned_cols=96 Identities=23% Similarity=0.290 Sum_probs=61.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCC-----CchHHHHHHhh-cCCCccE
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH-----DKPIQQVLVDL-TDGGVDY 259 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~-----~~~~~~~~~~~-~~gg~dv 259 (371)
+.+|||+|+ +++|.+.++.+...|+ +|+.++++++... ........+. .....+.+... ..+.+|+
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~-~V~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~ 74 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQA------DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDG 74 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTS------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCchhcc------cccceeccccCchhHHHHHHHHHHHHhcCCCeeE
Confidence 457999988 9999999999999999 8999988765321 1111111111 01111122222 2347999
Q ss_pred EEEccCCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 017431 260 SFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 260 vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+++++|.. ...+..+..|+++ |+++.+++.
T Consensus 75 linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-g~Iv~isS~ 130 (235)
T d1ooea_ 75 VFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG-GLLQLTGAA 130 (235)
T ss_dssp EEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCG
T ss_pred EEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccc-eEEEEeccH
Confidence 99988740 1345667778886 999999764
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=96.95 E-value=0.0033 Score=49.80 Aligned_cols=85 Identities=20% Similarity=0.214 Sum_probs=57.8
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCC--------CCchHHHHHHhhcCCCcc
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD--------HDKPIQQVLVDLTDGGVD 258 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~--------~~~~~~~~~~~~~~gg~d 258 (371)
.++|.|+|+|.+|.+.+..+...|+ .|++.++++++.+.+++.+......... ...+..+.+. .+|
T Consensus 1 sk~iaIiGaG~~G~~~A~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-----~aD 74 (184)
T d1bg6a2 1 SKTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVK-----DAD 74 (184)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHT-----TCS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhc-----CCC
Confidence 3689999999999999999999999 9999999999988887665322211100 0112222222 589
Q ss_pred EEEEccCCHHHHHHHHHHhc
Q 017431 259 YSFECIGNVSVMRAALECCH 278 (371)
Q Consensus 259 vvid~~g~~~~~~~~~~~l~ 278 (371)
++|-++.... .+..++.++
T Consensus 75 ~iii~v~~~~-~~~~~~~i~ 93 (184)
T d1bg6a2 75 VILIVVPAIH-HASIAANIA 93 (184)
T ss_dssp EEEECSCGGG-HHHHHHHHG
T ss_pred EEEEEEchhH-HHHHHHHhh
Confidence 9999988743 444444333
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=96.94 E-value=0.0056 Score=51.87 Aligned_cols=103 Identities=20% Similarity=0.286 Sum_probs=67.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCC---cEE--ecCCCCCchHHHHHHhhcC--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV---TEF--VNPKDHDKPIQQVLVDLTD--GG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~---~~v--i~~~~~~~~~~~~~~~~~~--gg 256 (371)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++. ... .|..+ ..+..+.+.+... |.
T Consensus 5 ~gKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~ 82 (268)
T d2bgka1 5 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTK-DEDVRNLVDTTIAKHGK 82 (268)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC-HHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCCceEEEEccCCC-HHHHHHHHHHHHHHcCC
Confidence 6899999988 8999999999889999 899999998876644 34432 222 23332 1233333333222 47
Q ss_pred ccEEEEccCCH---------------------------HHHHHHHHHhc-cCCceEEEEccC
Q 017431 257 VDYSFECIGNV---------------------------SVMRAALECCH-KGWGTSVIVGVA 290 (371)
Q Consensus 257 ~dvvid~~g~~---------------------------~~~~~~~~~l~-~~~G~iv~~g~~ 290 (371)
+|++++++|.. ...+.+++.|. .++|+++.+++.
T Consensus 83 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~ 144 (268)
T d2bgka1 83 LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASI 144 (268)
T ss_dssp CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCG
T ss_pred cceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccc
Confidence 99999988740 13556666663 224888888653
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=96.93 E-value=0.0018 Score=54.77 Aligned_cols=104 Identities=19% Similarity=0.314 Sum_probs=67.3
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHH----HHHhcCCcEEecCCCC-C-chHHHHHHhhcC-
Q 017431 184 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFD----RAKNFGVTEFVNPKDH-D-KPIQQVLVDLTD- 254 (371)
Q Consensus 184 ~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v-~~~~~~~~----~~~~~g~~~vi~~~~~-~-~~~~~~~~~~~~- 254 (371)
.-.|+++||+|+ +++|.+.++.+...|+ +|+.+ .++++..+ .+++.|........+. + .+....+.+...
T Consensus 3 ~L~GK~alITGas~GIG~aia~~la~~G~-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (259)
T d1ja9a_ 3 PLAGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH 81 (259)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHH
Confidence 456899999988 8999999999999999 67665 45554433 3445666443222221 1 222222332222
Q ss_pred -CCccEEEEccCCH-------------------------HHHHHHHHHhccCCceEEEEcc
Q 017431 255 -GGVDYSFECIGNV-------------------------SVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 255 -gg~dvvid~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
++.|+++++.|.. ...+.++..|.++ |.++.+.+
T Consensus 82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-g~~iii~s 141 (259)
T d1ja9a_ 82 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSS 141 (259)
T ss_dssp HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECC
T ss_pred cCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC-Cccccccc
Confidence 3799999988861 2467777888886 88877754
|
| >d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA2 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.93 E-value=0.0019 Score=55.66 Aligned_cols=103 Identities=14% Similarity=0.222 Sum_probs=71.1
Q ss_pred hhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcEEecCCCCCchHHHHHHhh
Q 017431 177 AVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDL 252 (371)
Q Consensus 177 ~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~ 252 (371)
-+.+..++++|++||=+|+| .|-.+..+|+..|+ +|++++.++++.+.++ +.|....+.... .++ ..
T Consensus 52 ~~~~~l~l~~G~~VLDiGCG-~G~~~~~~a~~~g~-~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~--~d~-----~~ 122 (291)
T d1kpia_ 52 LALDKLNLEPGMTLLDIGCG-WGSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRI--QGW-----EE 122 (291)
T ss_dssp HHHHTTCCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHSCCSSCEEEEE--CCG-----GG
T ss_pred HHHHhcCCCCCCEEEEecCc-chHHHHHHHHhcCc-ceeeccchHHHHHHHHHHHHhhccchhhhhhh--hcc-----cc
Confidence 35688899999999999986 34567889998999 9999999998766553 455533211111 111 12
Q ss_pred cCCCccEEEE-----ccCC----------HHHHHHHHHHhccCCceEEEEcc
Q 017431 253 TDGGVDYSFE-----CIGN----------VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 253 ~~gg~dvvid-----~~g~----------~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
..+.||.|+. .++. +..++.+.+.|+|+ |+++.-..
T Consensus 123 ~~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~Lkpg-G~~~l~~i 173 (291)
T d1kpia_ 123 FDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD-GRMLLHTI 173 (291)
T ss_dssp CCCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTT-CEEEEEEE
T ss_pred cccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCC-CceEEEEE
Confidence 2347998886 3322 35688999999997 99886543
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=96.92 E-value=0.0028 Score=53.54 Aligned_cols=106 Identities=21% Similarity=0.325 Sum_probs=66.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHH-----HhcCCcEEecCCCC-C-chHHHHHHhhcC-
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKFDRA-----KNFGVTEFVNPKDH-D-KPIQQVLVDLTD- 254 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~-~~~~~~-----~~~g~~~vi~~~~~-~-~~~~~~~~~~~~- 254 (371)
-+|+++||+|+ +++|.+.++.+...|+ +|+.+++++ ++.+.+ .+.|........+. + .+..+.+.+...
T Consensus 2 L~gK~alITGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (260)
T d1x1ta1 2 LKGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ 80 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred CCcCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 36899999988 8999999988889999 899998864 333322 23454433222221 1 222222322222
Q ss_pred -CCccEEEEccCCH-------------------------HHHHHHHHHhcc-CCceEEEEccCC
Q 017431 255 -GGVDYSFECIGNV-------------------------SVMRAALECCHK-GWGTSVIVGVAA 291 (371)
Q Consensus 255 -gg~dvvid~~g~~-------------------------~~~~~~~~~l~~-~~G~iv~~g~~~ 291 (371)
|++|++++++|.. ...+.++..|.+ ++|+||.+++..
T Consensus 81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~ 144 (260)
T d1x1ta1 81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAH 144 (260)
T ss_dssp HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred hCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeeccccc
Confidence 4799999988861 134555666643 238999987643
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.92 E-value=0.0037 Score=54.08 Aligned_cols=103 Identities=23% Similarity=0.279 Sum_probs=66.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh---------hHH-HH---HhcCCcEEecCCCCCchHHHHHHh
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK---------KFD-RA---KNFGVTEFVNPKDHDKPIQQVLVD 251 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~---------~~~-~~---~~~g~~~vi~~~~~~~~~~~~~~~ 251 (371)
+|+++||+|+ +++|.+.++.+...|+ +|++.+++.+ ..+ .. ...+.....+..+. .+..+.+..
T Consensus 6 ~gKvalITGas~GIG~aiA~~la~~Ga-~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~v~~ 83 (302)
T d1gz6a_ 6 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSV-EAGEKLVKT 83 (302)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCG-GGHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchH-HHHHHHHHH
Confidence 5899999988 8999999999999999 8888865432 222 22 23444444554442 222333333
Q ss_pred hc--CCCccEEEEccCCH-------------------------HHHHHHHHHhc-cCCceEEEEccC
Q 017431 252 LT--DGGVDYSFECIGNV-------------------------SVMRAALECCH-KGWGTSVIVGVA 290 (371)
Q Consensus 252 ~~--~gg~dvvid~~g~~-------------------------~~~~~~~~~l~-~~~G~iv~~g~~ 290 (371)
.. .|++|++++++|.. ...+.++..|. .++|+||.+++.
T Consensus 84 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~ 150 (302)
T d1gz6a_ 84 ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASA 150 (302)
T ss_dssp HHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCH
T ss_pred HHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCCh
Confidence 22 24799999998861 13566666664 224999999763
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.90 E-value=0.0013 Score=56.12 Aligned_cols=100 Identities=23% Similarity=0.250 Sum_probs=63.6
Q ss_pred CCCEE-EEEcC-ChHHHHHHH-HHHHcCCCeEEEEcCChhhHHHH----HhcCCcE-E--ecCCCCCch---HHHHHHhh
Q 017431 186 PGSIV-AVFGL-GTVGLAVAE-GAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKP---IQQVLVDL 252 (371)
Q Consensus 186 ~g~~V-lI~Ga-g~vG~~ai~-la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~---~~~~~~~~ 252 (371)
+|++| ||+|+ +++|.+.++ |++..|+ +|+.+++++++.+.+ ++.+... . .|..+ ... +.+.+.+.
T Consensus 1 ~g~rVAlVTGas~GIG~a~A~~la~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~-~~sv~~~~~~~~~~ 78 (275)
T d1wmaa1 1 SGIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD-LQSIRALRDFLRKE 78 (275)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCC-HHHHHHHHHHHHHh
Confidence 46778 67788 899998665 6666688 899999998876533 3334322 2 23333 112 22233332
Q ss_pred cCCCccEEEEccCCH-------------------------HHHHHHHHHhccCCceEEEEcc
Q 017431 253 TDGGVDYSFECIGNV-------------------------SVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 253 ~~gg~dvvid~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
. +++|++++.+|-. .+.+.++..|+++ |++|.+++
T Consensus 79 ~-g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-g~ivnisS 138 (275)
T d1wmaa1 79 Y-GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ-GRVVNVSS 138 (275)
T ss_dssp H-SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEECC
T ss_pred c-CCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccccc
Confidence 2 3799999988851 1355566777885 99998875
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=96.90 E-value=0.0008 Score=57.69 Aligned_cols=78 Identities=19% Similarity=0.243 Sum_probs=54.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCcEE---ecCCCCCchHHHHHHhhcC--CCcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTEF---VNPKDHDKPIQQVLVDLTD--GGVD 258 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~g~~~v---i~~~~~~~~~~~~~~~~~~--gg~d 258 (371)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+ +.++++.... .|..+ ..+..+.+.+... +.+|
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g~id 81 (276)
T d1bdba_ 4 KGEAVLITGGASGLGRALVDRFVAEGA-KVAVLDKSAERLAELETDHGDNVLGIVGDVRS-LEDQKQAASRCVARFGKID 81 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeeEEeccccc-HHHHHHHHHHHHHHhCCcc
Confidence 6899999988 9999999999999999 9999999988765 4445664332 23322 1222233333222 3799
Q ss_pred EEEEccC
Q 017431 259 YSFECIG 265 (371)
Q Consensus 259 vvid~~g 265 (371)
++++++|
T Consensus 82 ilvnnAG 88 (276)
T d1bdba_ 82 TLIPNAG 88 (276)
T ss_dssp EEECCCC
T ss_pred ccccccc
Confidence 9999887
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=96.90 E-value=0.0021 Score=54.27 Aligned_cols=105 Identities=13% Similarity=0.044 Sum_probs=61.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcEE----ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF----VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~v----i~~~~~~~~~~~~~~~~~~-- 254 (371)
+|++|||+|+ +++|.+.+......|+ +|+++.+..++.+.+. ..+...+ .|.........+.+.+...
T Consensus 4 ~gK~vlITGgs~GIG~~~A~~la~~G~-~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 82 (254)
T d1sbya1 4 TNKNVIFVAALGGIGLDTSRELVKRNL-KNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL 82 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTCC-SEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence 5899999987 8999998888888899 6666655444433332 2222221 2222111223333333322
Q ss_pred CCccEEEEccCCH-----------------HHHHHHHHHhcc----CCceEEEEccCC
Q 017431 255 GGVDYSFECIGNV-----------------SVMRAALECCHK----GWGTSVIVGVAA 291 (371)
Q Consensus 255 gg~dvvid~~g~~-----------------~~~~~~~~~l~~----~~G~iv~~g~~~ 291 (371)
+++|++++++|.. ...+.++..|.+ ..|++|.+++..
T Consensus 83 g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~ 140 (254)
T d1sbya1 83 KTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVT 140 (254)
T ss_dssp SCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGG
T ss_pred CCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechh
Confidence 3799999999871 134555555632 128898887643
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=96.88 E-value=0.0049 Score=51.71 Aligned_cols=103 Identities=17% Similarity=0.207 Sum_probs=66.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCC--c-EE--ecCCCCCchHHHHHHhhcC--CC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGV--T-EF--VNPKDHDKPIQQVLVDLTD--GG 256 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~--~-~v--i~~~~~~~~~~~~~~~~~~--gg 256 (371)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +++. . .. .|..+ ..+..+.+.+... |+
T Consensus 5 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~G~ 82 (251)
T d1zk4a1 5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSD-EDGWTKLFDATEKAFGP 82 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC-HHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCC-HHHHHHHHHHHHHHhCC
Confidence 5899999988 9999999999999999 8999999988776543 3332 1 12 23322 1222222222222 47
Q ss_pred ccEEEEccCCH-------------------------HHHHHHHHHhccC-C-ceEEEEccC
Q 017431 257 VDYSFECIGNV-------------------------SVMRAALECCHKG-W-GTSVIVGVA 290 (371)
Q Consensus 257 ~dvvid~~g~~-------------------------~~~~~~~~~l~~~-~-G~iv~~g~~ 290 (371)
+|++++++|.. ...+.++..|.+. + |++|.+++.
T Consensus 83 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~ 143 (251)
T d1zk4a1 83 VSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSI 143 (251)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCG
T ss_pred ceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeecc
Confidence 99999988761 1355566666532 2 588888764
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=96.88 E-value=0.0031 Score=52.35 Aligned_cols=73 Identities=25% Similarity=0.205 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++. ++.+...+.. +..... +.+.+.. +.+|++++++
T Consensus 3 kgK~~lVTGas~GIG~aia~~l~~~Ga-~V~~~~r~~~~l---~~~~~~~~~~--Dv~~~~-~~~~~~~-g~iD~lVnnA 74 (234)
T d1o5ia_ 3 RDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEELL---KRSGHRYVVC--DLRKDL-DLLFEKV-KEVDILVLNA 74 (234)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH---HHTCSEEEEC--CTTTCH-HHHHHHS-CCCSEEEECC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHH---HhcCCcEEEc--chHHHH-HHHHHHh-CCCcEEEecc
Confidence 6899999988 8999999999999999 899998887644 4555433321 211233 3333333 4799999988
Q ss_pred CC
Q 017431 265 GN 266 (371)
Q Consensus 265 g~ 266 (371)
|.
T Consensus 75 G~ 76 (234)
T d1o5ia_ 75 GG 76 (234)
T ss_dssp CC
T ss_pred cc
Confidence 75
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=96.87 E-value=0.0031 Score=53.15 Aligned_cols=80 Identities=23% Similarity=0.327 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEEecCCCCCch-HHHHHHhhc--CC
Q 017431 186 PGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFVNPKDHDKP-IQQVLVDLT--DG 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g--~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~vi~~~~~~~~-~~~~~~~~~--~g 255 (371)
+|+++||+|+ | ++|.+.++.+...|+ +|+.++++++..+.+ .+.+....+..+-.+.+ ..+.+.+.. -+
T Consensus 7 ~gK~alITGas~~~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (256)
T d1ulua_ 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG 85 (256)
T ss_dssp TTCEEEEESCCCSSSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcC
Confidence 6899999998 5 699998888888899 888888887654433 23443343322221122 222222222 14
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|+++++.+.
T Consensus 86 ~iDilVnnag~ 96 (256)
T d1ulua_ 86 GLDYLVHAIAF 96 (256)
T ss_dssp SEEEEEECCCC
T ss_pred CceEEEecccc
Confidence 79999998764
|
| >d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA1 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.84 E-value=0.0024 Score=54.75 Aligned_cols=100 Identities=14% Similarity=0.179 Sum_probs=70.9
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCcE-E-ecCCCCCchHHHHHHh
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE-F-VNPKDHDKPIQQVLVD 251 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~~-v-i~~~~~~~~~~~~~~~ 251 (371)
+.+..++++|++||=+|+| .|..++.+|+..|+ +|++++.++++.+++++ .|... + +...+ + ..
T Consensus 54 ~~~~l~l~~G~~VLDiGCG-~G~~a~~~a~~~g~-~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~d----~----~~ 123 (285)
T d1kpga_ 54 ALGKLGLQPGMTLLDVGCG-WGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAG----W----EQ 123 (285)
T ss_dssp HHTTTTCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESC----G----GG
T ss_pred HHHHcCCCCCCEEEEecCc-chHHHHHHHhcCCc-ceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHhh----h----hc
Confidence 5688899999999999986 56778889999999 99999999998877654 33211 1 11111 1 11
Q ss_pred hcCCCccEEEE-----ccCC---HHHHHHHHHHhccCCceEEEEcc
Q 017431 252 LTDGGVDYSFE-----CIGN---VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 252 ~~~gg~dvvid-----~~g~---~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
.++.+|.|+. .++. ...++.+.+.|+++ |+++....
T Consensus 124 -~~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~Lkpg-G~~~l~~i 167 (285)
T d1kpga_ 124 -FDEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD-GVMLLHTI 167 (285)
T ss_dssp -CCCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT-CEEEEEEE
T ss_pred -ccccccceeeehhhhhcCchhHHHHHHHHHhhcCCC-CcEEEEEE
Confidence 1347888775 3333 35688899999997 99886543
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.81 E-value=0.0031 Score=48.79 Aligned_cols=99 Identities=21% Similarity=0.282 Sum_probs=68.8
Q ss_pred hhhhcC-CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCC
Q 017431 177 AVWNTA-KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 177 ~l~~~~-~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~g 255 (371)
++.+.. -.-.|++|+|.|-|-+|...++.++.+|+ +|++++.++-+.-.+.--|. .+. .+.+.+ .
T Consensus 13 ~~~r~t~~~l~Gk~v~V~GyG~iG~g~A~~~rg~G~-~V~v~e~dp~~al~A~~dG~-~v~-------~~~~a~-----~ 78 (163)
T d1li4a1 13 GIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGA-RVIITEIDPINALQAAMEGY-EVT-------TMDEAC-----Q 78 (163)
T ss_dssp HHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTC-EEC-------CHHHHT-----T
T ss_pred HHHHHhCceecCCEEEEeccccccHHHHHHHHhCCC-eeEeeecccchhHHhhcCce-Eee-------ehhhhh-----h
Confidence 344433 35689999999999999999999999999 99999998865433333343 222 122221 1
Q ss_pred CccEEEEccCCHHH-HHHHHHHhccCCceEEEEccC
Q 017431 256 GVDYSFECIGNVSV-MRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 256 g~dvvid~~g~~~~-~~~~~~~l~~~~G~iv~~g~~ 290 (371)
..|+++-++|..+. -..-++.|+++ ..+...|..
T Consensus 79 ~adivvtaTGn~~vI~~eh~~~MKdg-aIL~N~Ghf 113 (163)
T d1li4a1 79 EGNIFVTTTGCIDIILGRHFEQMKDD-AIVCNIGHF 113 (163)
T ss_dssp TCSEEEECSSCSCSBCHHHHTTCCTT-EEEEECSSS
T ss_pred hccEEEecCCCccchhHHHHHhccCC-eEEEEeccc
Confidence 48999999998553 46777888885 555555554
|
| >d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein TM0748 species: Thermotoga maritima [TaxId: 2336]
Probab=96.80 E-value=0.0029 Score=53.62 Aligned_cols=101 Identities=21% Similarity=0.279 Sum_probs=72.1
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----cCCc-EE-ecCCCCCchHHHHHH
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVT-EF-VNPKDHDKPIQQVLV 250 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~v~~v~~~~~~~~~~~~----~g~~-~v-i~~~~~~~~~~~~~~ 250 (371)
+....++++|++||=.|+|. |..++.+|+..|. .+|++++.+++..+.+++ +|.. .+ +...+ +.
T Consensus 95 Ii~~l~i~pG~~VLDiG~Gs-G~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~d--------~~ 165 (266)
T d1o54a_ 95 IAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRD--------IS 165 (266)
T ss_dssp HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCC--------GG
T ss_pred HHHhhCCCCCCEEEECCCCC-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEecc--------cc
Confidence 56788999999999998864 7777888998863 389999999988777653 5542 22 22222 11
Q ss_pred hhcCC-CccEEEEccCC-HHHHHHHHHHhccCCceEEEEc
Q 017431 251 DLTDG-GVDYSFECIGN-VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 251 ~~~~g-g~dvvid~~g~-~~~~~~~~~~l~~~~G~iv~~g 288 (371)
..... .+|.|+--... ...++.+.+.|++| |+++.+.
T Consensus 166 ~~~~~~~~D~V~~d~p~p~~~l~~~~~~LKpG-G~lv~~~ 204 (266)
T d1o54a_ 166 EGFDEKDVDALFLDVPDPWNYIDKCWEALKGG-GRFATVC 204 (266)
T ss_dssp GCCSCCSEEEEEECCSCGGGTHHHHHHHEEEE-EEEEEEE
T ss_pred ccccccceeeeEecCCCHHHHHHHHHhhcCCC-CEEEEEe
Confidence 22233 78877755555 46789999999997 9998764
|
| >d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Sulfolobus tokodaii [TaxId: 111955]
Probab=96.74 E-value=0.001 Score=55.00 Aligned_cols=99 Identities=16% Similarity=0.218 Sum_probs=67.3
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC----cEEecCCCCCchHHHHHHhhc
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV----TEFVNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~----~~vi~~~~~~~~~~~~~~~~~ 253 (371)
+.....+++|++||-+|+| .|..++.+++. +. +|++++.+++..+.+++.-. ..++. .+....+ ..
T Consensus 62 ml~~L~l~~g~~VLdIG~G-sGy~ta~La~l-~~-~V~aiE~~~~~~~~A~~~~~~~~nv~~~~-~d~~~g~------~~ 131 (224)
T d1vbfa_ 62 MLDELDLHKGQKVLEIGTG-IGYYTALIAEI-VD-KVVSVEINEKMYNYASKLLSYYNNIKLIL-GDGTLGY------EE 131 (224)
T ss_dssp HHHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEEESCHHHHHHHHHHHTTCSSEEEEE-SCGGGCC------GG
T ss_pred HHHHhhhcccceEEEecCC-CCHHHHHHHHH-hc-ccccccccHHHHHHHHHHHhccccccccc-Cchhhcc------hh
Confidence 4567789999999999986 56667777876 44 89999999988777765321 11221 1100001 11
Q ss_pred CCCccEEEEccCCHHHHHHHHHHhccCCceEEEE
Q 017431 254 DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 254 ~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
.+.||.|+-+.+-+......+++|++| |++|..
T Consensus 132 ~~pfD~Iiv~~a~~~ip~~l~~qLk~G-GrLV~p 164 (224)
T d1vbfa_ 132 EKPYDRVVVWATAPTLLCKPYEQLKEG-GIMILP 164 (224)
T ss_dssp GCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred hhhHHHHHhhcchhhhhHHHHHhcCCC-CEEEEE
Confidence 137999987666556567788999997 999875
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=96.71 E-value=0.0014 Score=55.43 Aligned_cols=79 Identities=20% Similarity=0.301 Sum_probs=53.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhcC--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLTD--G 255 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~~--g 255 (371)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++.|.... .|..+ ..+..+.+.+... |
T Consensus 10 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~-~~~~~~~~~~~~~~~g 87 (255)
T d1fmca_ 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS-EQELSALADFAISKLG 87 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 6899999988 8999999999999999 899999988765533 34554332 22222 1222222222222 3
Q ss_pred CccEEEEccCC
Q 017431 256 GVDYSFECIGN 266 (371)
Q Consensus 256 g~dvvid~~g~ 266 (371)
++|++++++|.
T Consensus 88 ~iDilvnnAG~ 98 (255)
T d1fmca_ 88 KVDILVNNAGG 98 (255)
T ss_dssp SCCEEEECCCC
T ss_pred CCCEeeeCCcC
Confidence 79999998876
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=96.68 E-value=0.0061 Score=47.43 Aligned_cols=85 Identities=20% Similarity=0.266 Sum_probs=58.9
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC-cEEecCCCCCchHHHHHHhhcCCCccEEEEccCCH
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV-TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 267 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~-~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~ 267 (371)
+|.|+|+|.+|.+.+..++..|. +|++.++++++.+.+++.|. +...+..+ .+ ...|+||-|+...
T Consensus 2 kI~iIG~G~mG~~lA~~l~~~g~-~V~~~d~~~~~~~~a~~~~~~~~~~~~~~-------~~-----~~~DiIilavp~~ 68 (165)
T d2f1ka2 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQDLS-------LL-----QTAKIIFLCTPIQ 68 (165)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEESCGG-------GG-----TTCSEEEECSCHH
T ss_pred EEEEEeecHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHhhccceeeeecc-------cc-----cccccccccCcHh
Confidence 58899999999988888888999 89999999999998888885 33322111 11 2589999888753
Q ss_pred HHHHHHHHH----hccCCceEEEEc
Q 017431 268 SVMRAALEC----CHKGWGTSVIVG 288 (371)
Q Consensus 268 ~~~~~~~~~----l~~~~G~iv~~g 288 (371)
.++..++. +.++ ..++.++
T Consensus 69 -~~~~vl~~l~~~l~~~-~iv~~~~ 91 (165)
T d2f1ka2 69 -LILPTLEKLIPHLSPT-AIVTDVA 91 (165)
T ss_dssp -HHHHHHHHHGGGSCTT-CEEEECC
T ss_pred -hhhhhhhhhhhhcccc-cceeecc
Confidence 34444444 4443 4444454
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.64 E-value=0.0015 Score=53.11 Aligned_cols=96 Identities=18% Similarity=0.152 Sum_probs=61.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEe-cCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi-~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
.++|+|+|| |.+|...+..+...|. +|+++.+++++.......++..+. |..+ . +.+.+.. .+.|+||+++
T Consensus 3 ~kkIlV~GatG~iG~~v~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~gD~~d--~---~~l~~al-~~~d~vi~~~ 75 (205)
T d1hdoa_ 3 VKKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPAHVVVGDVLQ--A---ADVDKTV-AGQDAVIVLL 75 (205)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCSEEEESCTTS--H---HHHHHHH-TTCSEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEEcChhhcccccccccccccccccc--h---hhHHHHh-cCCCEEEEEe
Confidence 478999988 9999999998888999 899999988876544344443332 2222 1 2233322 2589999998
Q ss_pred CCH----------HHHHHHHHHhccC-CceEEEEcc
Q 017431 265 GNV----------SVMRAALECCHKG-WGTSVIVGV 289 (371)
Q Consensus 265 g~~----------~~~~~~~~~l~~~-~G~iv~~g~ 289 (371)
|.. .....+++.+... -.+++.++.
T Consensus 76 g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss 111 (205)
T d1hdoa_ 76 GTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS 111 (205)
T ss_dssp CCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred ccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEee
Confidence 752 1233445555442 147787754
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=96.64 E-value=0.0036 Score=49.93 Aligned_cols=102 Identities=12% Similarity=0.088 Sum_probs=65.5
Q ss_pred hhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE----------EecCCCC------C
Q 017431 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE----------FVNPKDH------D 242 (371)
Q Consensus 179 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~----------vi~~~~~------~ 242 (371)
+....+.+|++||.+|+| .|..++.+|+. |+ +|++++.+++-.+.+++..... ....... .
T Consensus 13 ~~~l~~~~~~rvLd~GCG-~G~~a~~la~~-G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 89 (201)
T d1pjza_ 13 WSSLNVVPGARVLVPLCG-KSQDMSWLSGQ-GY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF 89 (201)
T ss_dssp HHHHCCCTTCEEEETTTC-CSHHHHHHHHH-CC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC
T ss_pred HHHcCCCCCCEEEEecCc-CCHHHHHHHHc-CC-ceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccc
Confidence 455678999999999986 56788888875 99 9999999999888887532110 0000000 0
Q ss_pred chHHHHHHhhcCCCccEEEEccCC--------HHHHHHHHHHhccCCceEEEEc
Q 017431 243 KPIQQVLVDLTDGGVDYSFECIGN--------VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 243 ~~~~~~~~~~~~gg~dvvid~~g~--------~~~~~~~~~~l~~~~G~iv~~g 288 (371)
..+.... ...+|+|++...- ...++.+.+.|+++ |+++...
T Consensus 90 ~~l~~~~----~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~Lkpg-G~l~l~~ 138 (201)
T d1pjza_ 90 FALTARD----IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQA-CSGLLIT 138 (201)
T ss_dssp SSSTHHH----HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSE-EEEEEEE
T ss_pred ccccccc----ccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCC-cEEEEEE
Confidence 0000000 0168999874332 24578888999997 9876553
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=96.63 E-value=0.0016 Score=45.77 Aligned_cols=36 Identities=28% Similarity=0.343 Sum_probs=32.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
+|++|+|+|.|..|+++++++...|+ +|++.+....
T Consensus 4 ~~K~v~ViGlG~sG~s~a~~L~~~g~-~v~~~D~~~~ 39 (93)
T d2jfga1 4 QGKNVVIIGLGLTGLSCVDFFLARGV-TPRVMDTRMT 39 (93)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTC-CCEEEESSSS
T ss_pred CCCEEEEEeECHHHHHHHHHHHHCCC-EEEEeeCCcC
Confidence 57899999999999999999999999 8999987553
|
| >d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Methoxy mycolic acid synthase 4, Mma4 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.61 E-value=0.0095 Score=50.77 Aligned_cols=103 Identities=13% Similarity=0.188 Sum_probs=69.6
Q ss_pred hhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCcEEecCCCCCchHHHHHHh
Q 017431 176 GAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVD 251 (371)
Q Consensus 176 ~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~ 251 (371)
.-+.+..++++|++||=+|+|. |..+..+++..|+ +|++++.+++..+.+++ .|....+.... .++ +
T Consensus 42 ~~~~~~l~l~~g~~VLDiGCG~-G~~a~~~a~~~g~-~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~--~d~-----~ 112 (280)
T d2fk8a1 42 DLNLDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLL--QGW-----E 112 (280)
T ss_dssp HHHHTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE--SCG-----G
T ss_pred HHHHHHcCCCCCCEEEEecCCc-hHHHHHHHHhCce-eEEEecchHHHHHHHHHHHHhhccccchhhhh--hhh-----h
Confidence 3466888999999999999863 3456778888899 99999999998777654 34321111110 111 1
Q ss_pred hcCCCccEEEE-----ccCC---HHHHHHHHHHhccCCceEEEEc
Q 017431 252 LTDGGVDYSFE-----CIGN---VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 252 ~~~gg~dvvid-----~~g~---~~~~~~~~~~l~~~~G~iv~~g 288 (371)
..++.||.|+. .++. +..++.+.+.|+++ |+++.-.
T Consensus 113 ~~~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~Lkpg-G~~~i~~ 156 (280)
T d2fk8a1 113 DFAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPAD-GRMTVQS 156 (280)
T ss_dssp GCCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTT-CEEEEEE
T ss_pred hhccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCC-ceEEEEE
Confidence 12347898874 3332 34588899999997 9998653
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.60 E-value=0.0015 Score=54.96 Aligned_cols=79 Identities=16% Similarity=0.196 Sum_probs=52.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHHhcCCcE--E--ecCCCCCch---HHHHHHhhcCC-C
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRAKNFGVTE--F--VNPKDHDKP---IQQVLVDLTDG-G 256 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~-~v~~v~~~~~~~~~~~~~g~~~--v--i~~~~~~~~---~~~~~~~~~~g-g 256 (371)
.++|||+|+ +++|.+.++.+...|+. +|+.+.++.++.+.+++..... + .|..+ ... +.+.+.+..+. +
T Consensus 3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~-~~~v~~~~~~i~~~~~~~~ 81 (250)
T d1yo6a1 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTC-DKSLDTFVSKVGEIVGSDG 81 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTC-HHHHHHHHHHHHHHHGGGC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCC-HHHHHHHHHHHHHHhCCCC
Confidence 489999988 99999988877777863 6888889998887776643322 2 23332 112 22333333334 6
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
.|++++++|.
T Consensus 82 idilinnAG~ 91 (250)
T d1yo6a1 82 LSLLINNAGV 91 (250)
T ss_dssp CCEEEECCCC
T ss_pred eEEEEEcCcc
Confidence 9999999884
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=96.59 E-value=0.0027 Score=54.71 Aligned_cols=78 Identities=13% Similarity=0.186 Sum_probs=52.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHH-----HHhcCCcEE-e--cCCCCCchHHH-HHHhhc--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR-----AKNFGVTEF-V--NPKDHDKPIQQ-VLVDLT-- 253 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~-----~~~~g~~~v-i--~~~~~~~~~~~-~~~~~~-- 253 (371)
+|+++||+|+ +++|.+.+..+...|+ +|+.+++++++.+. ..+.|.... + |..+ .+-.+ .+....
T Consensus 24 ~gK~alITGas~GIG~aiA~~la~~Ga-~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~--~~~v~~~~~~~~~~ 100 (294)
T d1w6ua_ 24 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRD--PDMVQNTVSELIKV 100 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccC--hHHHHHHhhhhhhh
Confidence 6799999987 9999999999889999 99999999876542 233454332 2 2222 22222 222221
Q ss_pred CCCccEEEEccCC
Q 017431 254 DGGVDYSFECIGN 266 (371)
Q Consensus 254 ~gg~dvvid~~g~ 266 (371)
.+++|+++++.|.
T Consensus 101 ~g~iDilvnnAg~ 113 (294)
T d1w6ua_ 101 AGHPNIVINNAAG 113 (294)
T ss_dssp TCSCSEEEECCCC
T ss_pred ccccchhhhhhhh
Confidence 2489999999886
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=96.59 E-value=0.0056 Score=45.81 Aligned_cols=75 Identities=21% Similarity=0.393 Sum_probs=54.6
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCH
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 267 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~ 267 (371)
++++|+|.|.+|...++.+...|. .|++++.++++.+.+++.+...++.... +.+ .+.+..-..+|.++-++++.
T Consensus 1 k~~iIiG~G~~G~~la~~L~~~g~-~vvvid~d~~~~~~~~~~~~~~~~gd~~-~~~---~l~~a~i~~a~~vi~~~~~~ 75 (134)
T d2hmva1 1 KQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHAVIANAT-EEN---ELLSLGIRNFEYVIVAIGAN 75 (134)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHHTTTTCSEEEECCTT-CTT---HHHHHTGGGCSEEEECCCSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-eEEEecCcHHHHHHHHHhCCcceeeecc-cch---hhhccCCccccEEEEEcCch
Confidence 357888999999999999999999 8999999999999988888654442222 122 23333112688888877763
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=96.57 E-value=0.0017 Score=55.01 Aligned_cols=79 Identities=22% Similarity=0.233 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-----HHHhcCCcEE---ecCCCCCchHHHHHHhhc--C
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-----RAKNFGVTEF---VNPKDHDKPIQQVLVDLT--D 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~-----~~~~~g~~~v---i~~~~~~~~~~~~~~~~~--~ 254 (371)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+ +.+++|.... .|..+ ..+..+.+.+.. .
T Consensus 8 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 85 (260)
T d1h5qa_ 8 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN-TDIVTKTIQQIDADL 85 (260)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTC-HHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHh
Confidence 5789999988 8999999999999999 8999998876543 2244565432 23333 122222222222 2
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
|++|+++++.|.
T Consensus 86 g~iDilVnnAg~ 97 (260)
T d1h5qa_ 86 GPISGLIANAGV 97 (260)
T ss_dssp CSEEEEEECCCC
T ss_pred CCCcEecccccc
Confidence 479999998874
|
| >d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Guanidinoacetate methyltransferase domain: Guanidinoacetate methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.53 E-value=0.00049 Score=57.33 Aligned_cols=98 Identities=17% Similarity=0.202 Sum_probs=65.4
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCc---EEecCCCCCchHHHHHHhhcCCCccEE
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT---EFVNPKDHDKPIQQVLVDLTDGGVDYS 260 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~~~~~~~~gg~dvv 260 (371)
..+|.+||-+|+| .|..+..+++..+. +|++++.+++..+.+++.... .+... . .+.......+..+.||.+
T Consensus 51 ~~~g~~VLdIGcG-~G~~a~~~a~~~~~-~v~~id~s~~~~~~a~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~fD~i 125 (229)
T d1zx0a1 51 SSKGGRVLEVGFG-MAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPL-K--GLWEDVAPTLPDGHFDGI 125 (229)
T ss_dssp TTTCEEEEEECCT-TSHHHHHHHTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEE-E--SCHHHHGGGSCTTCEEEE
T ss_pred ccCCCeEEEeecc-chHHHHHHHHcCCC-eEEEeCCCHHHHHHHHHHhhhcccccccc-c--ccccccccccccccccce
Confidence 3678899999886 56777888887665 899999999988888754321 11101 1 223333444444589987
Q ss_pred E-EccCC----------HHHHHHHHHHhccCCceEEEE
Q 017431 261 F-ECIGN----------VSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 261 i-d~~g~----------~~~~~~~~~~l~~~~G~iv~~ 287 (371)
+ |.... ...++.+.+.|++| |+++.+
T Consensus 126 ~fD~~~~~~~~~~~~~~~~~~~~~~r~LkpG-G~~~~~ 162 (229)
T d1zx0a1 126 LYDTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYC 162 (229)
T ss_dssp EECCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEEC
T ss_pred eecccccccccccccCHHHHHHHHHHHcCCC-cEEEEE
Confidence 5 64433 23567788999997 998764
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=96.52 E-value=0.0023 Score=54.21 Aligned_cols=79 Identities=15% Similarity=0.185 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-hH----HHHHhcCCcEE---ecCCCCCchHHHHHHhhcC--
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KF----DRAKNFGVTEF---VNPKDHDKPIQQVLVDLTD-- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~-~~----~~~~~~g~~~v---i~~~~~~~~~~~~~~~~~~-- 254 (371)
+|+++||+|+ +++|.+.++.+...|+ +|+.++++.+ +. +.+++.|.... .|..+ ..+..+.+.+...
T Consensus 6 ~gK~alITGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~-~~~v~~~~~~~~~~~ 83 (261)
T d1geea_ 6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTV-ESDVINLVQSAIKEF 83 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHh
Confidence 6899999987 8999999888888999 8888887653 32 33445665432 23332 1222222232222
Q ss_pred CCccEEEEccCC
Q 017431 255 GGVDYSFECIGN 266 (371)
Q Consensus 255 gg~dvvid~~g~ 266 (371)
|++|++++++|.
T Consensus 84 G~iDiLVnnAG~ 95 (261)
T d1geea_ 84 GKLDVMINNAGL 95 (261)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEeecccee
Confidence 479999998876
|
| >d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical Protein YjhP domain: Hypothetical Protein YjhP species: Escherichia coli [TaxId: 562]
Probab=96.52 E-value=0.0039 Score=51.99 Aligned_cols=102 Identities=21% Similarity=0.261 Sum_probs=70.1
Q ss_pred hhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCcE--EecCCCCCchHHHH
Q 017431 175 LGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQV 248 (371)
Q Consensus 175 ~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~~--vi~~~~~~~~~~~~ 248 (371)
+..|....++++|++||=+|+| .|..+..+++..|+ +|++++.+++..+.+++ .|... .+...+ +
T Consensus 22 ~~~l~~~~~l~pg~~VLDiGCG-~G~~~~~la~~~~~-~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d----~--- 92 (245)
T d1nkva_ 22 YATLGRVLRMKPGTRILDLGSG-SGEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHND----A--- 92 (245)
T ss_dssp HHHHHHHTCCCTTCEEEEETCT-TCHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC----C---
T ss_pred HHHHHHHcCCCCCCEEEEEcCC-CCHHHHHHHHhcCC-EEEEEecccchhhHHHHHHHHhhccccchhhhhH----H---
Confidence 3346688899999999999885 34567778888898 99999999987766554 45431 121111 1
Q ss_pred HHhhc-CCCccEEEEcc------CCHHHHHHHHHHhccCCceEEEE
Q 017431 249 LVDLT-DGGVDYSFECI------GNVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 249 ~~~~~-~gg~dvvid~~------g~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
.+.. .+.||+|+..- .-..+++.+.+.|++| |+++..
T Consensus 93 -~~~~~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPG-G~l~i~ 136 (245)
T d1nkva_ 93 -AGYVANEKCDVAACVGATWIAGGFAGAEELLAQSLKPG-GIMLIG 136 (245)
T ss_dssp -TTCCCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE-EEEEEE
T ss_pred -hhccccCceeEEEEEehhhccCCHHHHHHHHHHHcCcC-cEEEEE
Confidence 1122 23899998631 2256788999999997 998865
|
| >d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ribosomal protein L11 methyltransferase PrmA domain: PrmA-like protein TTHA0656 (TT0836) species: Thermus thermophilus [TaxId: 274]
Probab=96.51 E-value=0.0051 Score=51.65 Aligned_cols=95 Identities=24% Similarity=0.411 Sum_probs=62.2
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCcEEecCCCCCchHHHHHHhhcCCCccE
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDGGVDY 259 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~gg~dv 259 (371)
.++|++||=+|+|. |..++.+++ .|+ +|++++.+++..+.+++ .|....+.. .+..+ ....+.||+
T Consensus 118 ~~~g~~VLDiGcGs-G~l~i~aa~-~g~-~V~gvDis~~av~~A~~na~~n~~~~~~~~----~d~~~---~~~~~~fD~ 187 (254)
T d2nxca1 118 LRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLE----GSLEA---ALPFGPFDL 187 (254)
T ss_dssp CCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEE----SCHHH---HGGGCCEEE
T ss_pred cCccCEEEEcccch-hHHHHHHHh-cCC-EEEEEECChHHHHHHHHHHHHcCCceeEEe----ccccc---cccccccch
Confidence 57899999998863 666665554 688 89999999987776653 444322211 12222 122247999
Q ss_pred EEEccCC---HHHHHHHHHHhccCCceEEEEcc
Q 017431 260 SFECIGN---VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 260 vid~~g~---~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
|+..... ...++.+.+.|+++ |+++..|.
T Consensus 188 V~ani~~~~l~~l~~~~~~~LkpG-G~lilSgi 219 (254)
T d2nxca1 188 LVANLYAELHAALAPRYREALVPG-GRALLTGI 219 (254)
T ss_dssp EEEECCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred hhhccccccHHHHHHHHHHhcCCC-cEEEEEec
Confidence 9865433 23457778889997 99986543
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=96.48 E-value=0.004 Score=52.50 Aligned_cols=104 Identities=19% Similarity=0.274 Sum_probs=66.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hc--CCcEE---ecCCCCCchHHHHHHhhcC-
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NF--GVTEF---VNPKDHDKPIQQVLVDLTD- 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~--g~~~v---i~~~~~~~~~~~~~~~~~~- 254 (371)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +. +.... .|..+ ..+....+.+...
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~-~~~v~~~~~~~~~~ 80 (258)
T d1iy8a_ 3 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD-EAQVEAYVTATTER 80 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTS-HHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCC-HHHHHHHHHHHHHH
Confidence 5789999988 8999999999999999 8999999988765432 12 22221 23333 1223332333222
Q ss_pred -CCccEEEEccCCH--------------------------HHHHHHHHHhc-cCCceEEEEccCC
Q 017431 255 -GGVDYSFECIGNV--------------------------SVMRAALECCH-KGWGTSVIVGVAA 291 (371)
Q Consensus 255 -gg~dvvid~~g~~--------------------------~~~~~~~~~l~-~~~G~iv~~g~~~ 291 (371)
|++|++++++|.. ...+.++..|. .++|+||.+++..
T Consensus 81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~ 145 (258)
T d1iy8a_ 81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVG 145 (258)
T ss_dssp HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGG
T ss_pred hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHh
Confidence 3799999988730 12444555553 3349999997643
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.46 E-value=0.017 Score=43.01 Aligned_cols=75 Identities=21% Similarity=0.314 Sum_probs=55.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCH
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 267 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~ 267 (371)
+|+|.|.|.+|...++.+...|. .|++++.++++.+.++ +++.. ++.-+. .-.+.+.+..-..+|.++-++++.
T Consensus 2 ~IvI~G~G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~~~~~~~~-vi~Gd~---~~~~~l~~~~i~~a~~vv~~t~~d 76 (132)
T d1lssa_ 2 YIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDAL-VINGDC---TKIKTLEDAGIEDADMYIAVTGKE 76 (132)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSE-EEESCT---TSHHHHHHTTTTTCSEEEECCSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCC-CcceecCChhhhhhhhhhhhhh-hccCcc---cchhhhhhcChhhhhhhcccCCcH
Confidence 68999999999999999999999 9999999999888775 45654 332222 112334444223799999998885
Q ss_pred H
Q 017431 268 S 268 (371)
Q Consensus 268 ~ 268 (371)
+
T Consensus 77 ~ 77 (132)
T d1lssa_ 77 E 77 (132)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.45 E-value=0.0047 Score=53.27 Aligned_cols=82 Identities=15% Similarity=0.273 Sum_probs=54.3
Q ss_pred CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc--------CCcEE---ecCCCCCchHHHHH
Q 017431 183 KVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF--------GVTEF---VNPKDHDKPIQQVL 249 (371)
Q Consensus 183 ~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~--------g~~~v---i~~~~~~~~~~~~~ 249 (371)
+.-+|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+ +++ +.... .|..+ ..+..+.+
T Consensus 8 g~L~gKvalITGas~GIG~aia~~la~~Ga-~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~-~~~v~~~~ 85 (297)
T d1yxma1 8 GLLQGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRN-EEEVNNLV 85 (297)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTC-HHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCC-HHHHHHHH
Confidence 3457899999988 8999999999999999 899999998775433 222 22222 23222 12233333
Q ss_pred HhhcC--CCccEEEEccCC
Q 017431 250 VDLTD--GGVDYSFECIGN 266 (371)
Q Consensus 250 ~~~~~--gg~dvvid~~g~ 266 (371)
.+... |++|++++++|.
T Consensus 86 ~~~~~~~G~iDiLVnnAg~ 104 (297)
T d1yxma1 86 KSTLDTFGKINFLVNNGGG 104 (297)
T ss_dssp HHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHhCCeEEEEeeccc
Confidence 33222 379999998875
|
| >d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.44 E-value=0.0022 Score=53.03 Aligned_cols=96 Identities=22% Similarity=0.232 Sum_probs=64.9
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----cCCc-----EE-ecCCCCCchHHHHHHh
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVT-----EF-VNPKDHDKPIQQVLVD 251 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~v~~v~~~~~~~~~~~~----~g~~-----~v-i~~~~~~~~~~~~~~~ 251 (371)
.+++|++||-+|+| .|..+..+|+..| ..+|++++.+++-.+.+++ .+.. .+ +...+ . ...
T Consensus 73 ~l~~g~~VLdiG~G-sGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD--~-----~~~ 144 (224)
T d1i1na_ 73 QLHEGAKALDVGSG-SGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGD--G-----RMG 144 (224)
T ss_dssp TSCTTCEEEEETCT-TSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESC--G-----GGC
T ss_pred ccCCCCeEEEecCC-CCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEee--c-----ccc
Confidence 68999999999986 5777888888876 3389999999886665532 2221 11 11111 0 011
Q ss_pred hcC-CCccEEEEccCCHHHHHHHHHHhccCCceEEEE
Q 017431 252 LTD-GGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 252 ~~~-gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
... +.||+|+.+..-++..+..++.|++| |++|..
T Consensus 145 ~~~~~~fD~I~~~~~~~~ip~~l~~~LkpG-G~LV~p 180 (224)
T d1i1na_ 145 YAEEAPYDAIHVGAAAPVVPQALIDQLKPG-GRLILP 180 (224)
T ss_dssp CGGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred cchhhhhhhhhhhcchhhcCHHHHhhcCCC-cEEEEE
Confidence 111 27999997766656567889999997 999874
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=96.41 E-value=0.016 Score=45.13 Aligned_cols=92 Identities=18% Similarity=0.287 Sum_probs=64.8
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHhcCCc-EEecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~-~~v~~v~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
++|+|+|.|.+|...+.-++..|. .+|++.+++++..+.+++.+.. ......+ .......|+++-|+.
T Consensus 2 k~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~----------~~~~~~~dlIila~p 71 (171)
T d2g5ca2 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIA----------KVEDFSPDFVMLSSP 71 (171)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGG----------GGGGTCCSEEEECSC
T ss_pred CEEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhh----------hhhccccccccccCC
Confidence 369999999999999988888884 3799999999999999998863 3332211 111125899998888
Q ss_pred CHH---HHHHHHHHhccCCceEEEEccC
Q 017431 266 NVS---VMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 266 ~~~---~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
... .++.....+.++ ..++.++..
T Consensus 72 ~~~~~~vl~~l~~~~~~~-~ii~d~~s~ 98 (171)
T d2g5ca2 72 VRTFREIAKKLSYILSED-ATVTDQGSV 98 (171)
T ss_dssp HHHHHHHHHHHHHHSCTT-CEEEECCSC
T ss_pred chhhhhhhhhhhcccccc-ccccccccc
Confidence 633 344555666664 667767653
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=96.41 E-value=0.0024 Score=50.36 Aligned_cols=77 Identities=13% Similarity=0.092 Sum_probs=51.6
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCC---cEEecCCCCCchHHHHHHhhc
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV---TEFVNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~---~~vi~~~~~~~~~~~~~~~~~ 253 (371)
|....-..++++|+|+|+|+.+.+++..+...+ .+++.+.|+.++.+.+ +.++. ...+... ...
T Consensus 9 l~~~~~~~~~k~vlIlGaGGaarai~~aL~~~~-~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~-----------~~~ 76 (171)
T d1p77a1 9 LQRLNWLRPNQHVLILGAGGATKGVLLPLLQAQ-QNIVLANRTFSKTKELAERFQPYGNIQAVSMD-----------SIP 76 (171)
T ss_dssp HHHTTCCCTTCEEEEECCSHHHHTTHHHHHHTT-CEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG-----------GCC
T ss_pred HHHcCCCCCCCEEEEECCcHHHHHHHHHHcccC-ceeeeccchHHHHHHHHHHHhhccccchhhhc-----------ccc
Confidence 333333557899999999999999888877655 5999999998876644 33432 1111111 111
Q ss_pred CCCccEEEEccCC
Q 017431 254 DGGVDYSFECIGN 266 (371)
Q Consensus 254 ~gg~dvvid~~g~ 266 (371)
...+|++++|++.
T Consensus 77 ~~~~diiIN~tp~ 89 (171)
T d1p77a1 77 LQTYDLVINATSA 89 (171)
T ss_dssp CSCCSEEEECCCC
T ss_pred ccccceeeecccc
Confidence 2379999999886
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=96.40 E-value=0.0046 Score=52.06 Aligned_cols=78 Identities=19% Similarity=0.271 Sum_probs=52.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhc--CCC
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DGG 256 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~--~gg 256 (371)
|+.+||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+ ++.|.... .|..+ ..+....+.+.. -|+
T Consensus 2 gKValITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~-~~~v~~~~~~~~~~~g~ 79 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS-VPEIEALVAAVVERYGP 79 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHTCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCC-HHHHHHHHHHHHHHhCC
Confidence 677899988 8999999998889999 899999998765533 34554332 23333 122222222222 247
Q ss_pred ccEEEEccCC
Q 017431 257 VDYSFECIGN 266 (371)
Q Consensus 257 ~dvvid~~g~ 266 (371)
+|++++++|.
T Consensus 80 iDilVnnAG~ 89 (257)
T d2rhca1 80 VDVLVNNAGR 89 (257)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEecccc
Confidence 9999998886
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.37 E-value=0.0028 Score=54.00 Aligned_cols=79 Identities=16% Similarity=0.247 Sum_probs=53.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCc--E----EecCCCCCchHHHHHHhhcC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVT--E----FVNPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~--~----vi~~~~~~~~~~~~~~~~~~ 254 (371)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +.+.. . ..|..+ ..+....+.+...
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~-~~~v~~~~~~~~~ 81 (272)
T d1xkqa_ 4 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT-EDGQDQIINSTLK 81 (272)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCC-HHHHHHHHHHHHH
Confidence 5899999988 9999999999999999 8999999988765442 33321 1 223333 1222222333222
Q ss_pred --CCccEEEEccCC
Q 017431 255 --GGVDYSFECIGN 266 (371)
Q Consensus 255 --gg~dvvid~~g~ 266 (371)
|++|++++++|.
T Consensus 82 ~~g~iDilvnnAG~ 95 (272)
T d1xkqa_ 82 QFGKIDVLVNNAGA 95 (272)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HhCCceEEEeCCcc
Confidence 379999998774
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.36 E-value=0.01 Score=49.74 Aligned_cols=100 Identities=17% Similarity=0.108 Sum_probs=63.8
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc----CCcEEecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 189 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 189 ~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
+.||+|+ +++|.+.+.-+...|+ +|+.++++.++.+.+++. ....+.+..+. ..+.+.+.+.. |++|+++++
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~-~~~~~~~~~~~-G~iDiLVnN 78 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKPMSEQEP-AELIEAVTSAY-GQVDVLVSN 78 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEECCCCSH-HHHHHHHHHHH-SCCCEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhhhCcEEEeccCCHHHH-HHHHHHHHHHc-CCCCEEEEC
Confidence 7899988 8999999888888999 899998887776655442 22233333321 22333333332 479999987
Q ss_pred cCCH--------------------------HHHHHHHHHhcc-CCceEEEEccCC
Q 017431 264 IGNV--------------------------SVMRAALECCHK-GWGTSVIVGVAA 291 (371)
Q Consensus 264 ~g~~--------------------------~~~~~~~~~l~~-~~G~iv~~g~~~ 291 (371)
.|.. ...+.++..|.+ ++|+||.+++..
T Consensus 79 Ag~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~ 133 (252)
T d1zmta1 79 DIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSAT 133 (252)
T ss_dssp CCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCST
T ss_pred CcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccc
Confidence 6530 123455555532 239999997754
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=96.34 E-value=0.0099 Score=49.54 Aligned_cols=99 Identities=17% Similarity=0.230 Sum_probs=61.6
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhc--CCCc
Q 017431 189 IVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGV 257 (371)
Q Consensus 189 ~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v-~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~--~gg~ 257 (371)
.|||+|+ +++|.+.++.+...|+ +|+.. .+++++.+.+ ++.|.... .|..+ ..+..+.+.+.. .|++
T Consensus 3 V~lITGas~GIG~a~a~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~i 80 (244)
T d1edoa_ 3 VVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK-EADVEAMMKTAIDAWGTI 80 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTS-HHHHHHHHHHHHHHSSCC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCC-HHHHHHHHHHHHHHcCCC
Confidence 5788887 8999999999999999 77765 4555544333 34554332 23332 122222222222 2479
Q ss_pred cEEEEccCCH-------------------------HHHHHHHHHh--ccCCceEEEEccC
Q 017431 258 DYSFECIGNV-------------------------SVMRAALECC--HKGWGTSVIVGVA 290 (371)
Q Consensus 258 dvvid~~g~~-------------------------~~~~~~~~~l--~~~~G~iv~~g~~ 290 (371)
|++++++|.. ...+.++..| +. +|+||.+++.
T Consensus 81 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~ 139 (244)
T d1edoa_ 81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASV 139 (244)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCT
T ss_pred CccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcC-CcEEEEEcCh
Confidence 9999988861 1355666666 35 4999999764
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=96.34 E-value=0.0082 Score=50.40 Aligned_cols=84 Identities=18% Similarity=0.236 Sum_probs=53.8
Q ss_pred CCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh----hH---HHHHhcCCcEE---ecCCCCCchHHHHHH
Q 017431 182 AKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK----KF---DRAKNFGVTEF---VNPKDHDKPIQQVLV 250 (371)
Q Consensus 182 ~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~----~~---~~~~~~g~~~v---i~~~~~~~~~~~~~~ 250 (371)
..++|+.++||+|+ +++|.+.+..+-..|++.|+.+.+++. .. +.+++.|.... .|..+ .......+.
T Consensus 4 ~~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d-~~~~~~~~~ 82 (259)
T d2fr1a1 4 DEWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTD-RESVRELLG 82 (259)
T ss_dssp CCCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHH
T ss_pred cccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccch-HHHHHHhhc
Confidence 45789999999987 999999888888889966777766532 12 23345665332 23333 122333333
Q ss_pred hhcCC-CccEEEEccCC
Q 017431 251 DLTDG-GVDYSFECIGN 266 (371)
Q Consensus 251 ~~~~g-g~dvvid~~g~ 266 (371)
..... ..|.++++.|.
T Consensus 83 ~i~~~~~i~~vv~~ag~ 99 (259)
T d2fr1a1 83 GIGDDVPLSAVFHAAAT 99 (259)
T ss_dssp TSCTTSCEEEEEECCCC
T ss_pred ccccccccccccccccc
Confidence 33333 78999998885
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.31 E-value=0.0034 Score=53.48 Aligned_cols=79 Identities=16% Similarity=0.238 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCc--E----EecCCCCCchHHHHHHhhcC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVT--E----FVNPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~--~----vi~~~~~~~~~~~~~~~~~~ 254 (371)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++.+.. . ..|..+ ..+..+.+.+...
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~ 80 (274)
T d1xhla_ 3 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE-ASGQDDIINTTLA 80 (274)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCC-HHHHHHHHHHHHH
Confidence 5899999988 8999999999999999 899999998876543 233321 1 123333 1222222333222
Q ss_pred --CCccEEEEccCC
Q 017431 255 --GGVDYSFECIGN 266 (371)
Q Consensus 255 --gg~dvvid~~g~ 266 (371)
|.+|+++++.|.
T Consensus 81 ~~G~iDilVnnAG~ 94 (274)
T d1xhla_ 81 KFGKIDILVNNAGA 94 (274)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCceEEEeeccc
Confidence 379999998774
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=96.27 E-value=0.0034 Score=53.15 Aligned_cols=79 Identities=18% Similarity=0.259 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCc----E--EecCCCCCchHHHHHHhhcC
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVT----E--FVNPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~----~--vi~~~~~~~~~~~~~~~~~~ 254 (371)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +.+.. . ..|..+ ..+..+.+.+...
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~-~~~v~~~~~~~~~ 81 (264)
T d1spxa_ 4 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTT-DAGQDEILSTTLG 81 (264)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCC-HHHHHHHHHHHHH
Confidence 6889999988 8999999999999999 8999999988765432 23321 1 123333 1222233333222
Q ss_pred --CCccEEEEccCC
Q 017431 255 --GGVDYSFECIGN 266 (371)
Q Consensus 255 --gg~dvvid~~g~ 266 (371)
|++|++++++|.
T Consensus 82 ~~g~iDilvnnAG~ 95 (264)
T d1spxa_ 82 KFGKLDILVNNAGA 95 (264)
T ss_dssp HHSCCCEEEECCC-
T ss_pred HhCCCCEeeccccc
Confidence 479999998874
|
| >d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Probable methyltransferase Rv2118c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.26 E-value=0.011 Score=49.69 Aligned_cols=103 Identities=20% Similarity=0.306 Sum_probs=70.5
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----cC---CcEE-ecCCCCCchHHHH
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FG---VTEF-VNPKDHDKPIQQV 248 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~v~~v~~~~~~~~~~~~----~g---~~~v-i~~~~~~~~~~~~ 248 (371)
+....+++||++||=.|+| .|.++..+|+..|. .+|++++.+++..+.+++ ++ .+.+ +...+ ..+
T Consensus 88 Ii~~l~i~PG~~VLE~G~G-sG~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~d----~~~- 161 (264)
T d1i9ga_ 88 IVHEGDIFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSD----LAD- 161 (264)
T ss_dssp HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSC----GGG-
T ss_pred HHHHhCCCCCCEEEecCcC-CcHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEecc----ccc-
Confidence 5577899999999988875 57778889998874 389999999998887764 11 1221 21211 100
Q ss_pred HHhhcCCCccEEE-EccCCHHHHHHHHHHhccCCceEEEEc
Q 017431 249 LVDLTDGGVDYSF-ECIGNVSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 249 ~~~~~~gg~dvvi-d~~g~~~~~~~~~~~l~~~~G~iv~~g 288 (371)
....++.||.|| |.-.....++.+.+.|+++ |+++.+.
T Consensus 162 -~~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpG-G~lv~~~ 200 (264)
T d1i9ga_ 162 -SELPDGSVDRAVLDMLAPWEVLDAVSRLLVAG-GVLMVYV 200 (264)
T ss_dssp -CCCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEE
T ss_pred -ccccCCCcceEEEecCCHHHHHHHHHhccCCC-CEEEEEe
Confidence 011223799766 4443446689999999997 9998774
|
| >d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical methyltransferase TM1389 species: Thermotoga maritima [TaxId: 2336]
Probab=96.21 E-value=0.0057 Score=50.62 Aligned_cols=93 Identities=16% Similarity=0.158 Sum_probs=66.9
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
+.++.+||=+|+| .|..+..+++ .|+ +|++++.+++..+.+++.+....+..... ++ ...++.||+|+..
T Consensus 40 ~~~~~~vLDiGcG-~G~~~~~l~~-~~~-~v~giD~s~~~l~~a~~~~~~~~~~~~~~--~l-----~~~~~~fD~ii~~ 109 (246)
T d2avna1 40 LKNPCRVLDLGGG-TGKWSLFLQE-RGF-EVVLVDPSKEMLEVAREKGVKNVVEAKAE--DL-----PFPSGAFEAVLAL 109 (246)
T ss_dssp CCSCCEEEEETCT-TCHHHHHHHT-TTC-EEEEEESCHHHHHHHHHHTCSCEEECCTT--SC-----CSCTTCEEEEEEC
T ss_pred cCCCCEEEEECCC-Cchhcccccc-cce-EEEEeeccccccccccccccccccccccc--cc-----ccccccccceeee
Confidence 4577889888887 6888888876 588 89999999999999998776655443221 11 1223479999864
Q ss_pred cC------C-HHHHHHHHHHhccCCceEEEE
Q 017431 264 IG------N-VSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 264 ~g------~-~~~~~~~~~~l~~~~G~iv~~ 287 (371)
.. + ..+++.+.+.|++| |.++..
T Consensus 110 ~~~~~~~~d~~~~l~~i~r~Lk~g-G~~ii~ 139 (246)
T d2avna1 110 GDVLSYVENKDKAFSEIRRVLVPD-GLLIAT 139 (246)
T ss_dssp SSHHHHCSCHHHHHHHHHHHEEEE-EEEEEE
T ss_pred cchhhhhhhHHHHHHHHHhhcCcC-cEEEEE
Confidence 33 2 34578888999997 988753
|
| >d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.01 E-value=0.036 Score=48.12 Aligned_cols=105 Identities=14% Similarity=0.162 Sum_probs=69.4
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-----------cCC----cEEecCCCCC
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-----------FGV----TEFVNPKDHD 242 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~-----------~g~----~~vi~~~~~~ 242 (371)
+.+..+++++++||=+|+| .|..++++|+..++.++++++.+++..+++++ +|. -.++...-.+
T Consensus 143 ~~~~~~l~~~~~vlD~GcG-~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~~~ 221 (328)
T d1nw3a_ 143 MIDEIKMTDDDLFVDLGSG-VGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLS 221 (328)
T ss_dssp HHHHSCCCTTCEEEEETCT-TSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCTTS
T ss_pred HHHHcCCCCCCEEEEcCCC-CCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECcccc
Confidence 5677889999999988886 68888899999998889999999987665543 121 1222222112
Q ss_pred chHHHHHHhhcCCCccEEEEccC--CH---HHHHHHHHHhccCCceEEEEcc
Q 017431 243 KPIQQVLVDLTDGGVDYSFECIG--NV---SVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 243 ~~~~~~~~~~~~gg~dvvid~~g--~~---~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
..+.+.+.+ +|+|+-..- .+ ..+...++.|++| |++|..-.
T Consensus 222 ~~~~~~~~~-----advi~~~~~~f~~~~~~~l~e~~r~LKpG-g~iv~~~~ 267 (328)
T d1nw3a_ 222 EEWRERIAN-----TSVIFVNNFAFGPEVDHQLKERFANMKEG-GRIVSSKP 267 (328)
T ss_dssp HHHHHHHHH-----CSEEEECCTTTCHHHHHHHHHHHTTCCTT-CEEEESSC
T ss_pred cccccccCc-----ceEEEEcceecchHHHHHHHHHHHhCCCC-cEEEEecc
Confidence 334333322 678874211 12 3466777888997 99987643
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.01 E-value=0.0012 Score=55.17 Aligned_cols=75 Identities=20% Similarity=0.196 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcC--CCccEEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTD--GGVDYSFE 262 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~--gg~dvvid 262 (371)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.. ...|..+ ..+..+.+.+... +++|++++
T Consensus 6 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~----~~~Dv~~-~~~v~~~~~~~~~~~g~iDiLVn 79 (237)
T d1uzma1 6 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLFG----VEVDVTD-SDAVDRAFTAVEEHQGPVEVLVS 79 (237)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSEE----EECCTTC-HHHHHHHHHHHHHHHSSCSEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcchhcCceE----EEEecCC-HHHHHHHHHHHHHhcCCceEEEe
Confidence 6899999988 8999999999999999 99999988765432211 1233333 1222222222222 37999999
Q ss_pred ccCC
Q 017431 263 CIGN 266 (371)
Q Consensus 263 ~~g~ 266 (371)
++|.
T Consensus 80 nAG~ 83 (237)
T d1uzma1 80 NAGL 83 (237)
T ss_dssp ECSC
T ss_pred eecc
Confidence 8875
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=96.00 E-value=0.0094 Score=50.02 Aligned_cols=77 Identities=19% Similarity=0.189 Sum_probs=50.7
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhc--CCCc
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGV 257 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~--~gg~ 257 (371)
+.+||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+ ++.|.... .|..+ ..+..+.+.+.. -|++
T Consensus 2 KValITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~i 79 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD-RDQVFAAVEQARKTLGGF 79 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHTTCC
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHHhCCc
Confidence 34688988 8999998888888899 899999998876533 34554332 23333 122222222222 2479
Q ss_pred cEEEEccCC
Q 017431 258 DYSFECIGN 266 (371)
Q Consensus 258 dvvid~~g~ 266 (371)
|++++++|.
T Consensus 80 DilVnnAG~ 88 (255)
T d1gega_ 80 DVIVNNAGV 88 (255)
T ss_dssp CEEEECCCC
T ss_pred cEEEecccc
Confidence 999998875
|
| >d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein YcgJ species: Bacillus subtilis [TaxId: 1423]
Probab=95.95 E-value=0.01 Score=48.89 Aligned_cols=100 Identities=18% Similarity=0.227 Sum_probs=66.9
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcE--EecCCCCCchHHHHHHh
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE--FVNPKDHDKPIQQVLVD 251 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~--vi~~~~~~~~~~~~~~~ 251 (371)
|.....+++|++||=+|+| .|..+..+++. +. +|++++.+++-.+.++ +.+... ++..+. .++ .
T Consensus 8 l~~~~~~~~~~rILDiGcG-tG~~~~~la~~-~~-~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~--~~~-----~ 77 (234)
T d1xxla_ 8 MIKTAECRAEHRVLDIGAG-AGHTALAFSPY-VQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTA--ESL-----P 77 (234)
T ss_dssp HHHHHTCCTTCEEEEESCT-TSHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBT--TBC-----C
T ss_pred HHHHhCCCCCCEEEEeCCc-CcHHHHHHHHh-CC-eEEEEeCChhhhhhhhhhhccccccccccccccc--ccc-----c
Confidence 5678899999999999886 46777777774 66 8999999988666554 334322 121111 000 1
Q ss_pred hcCCCccEEEEccC-----C-HHHHHHHHHHhccCCceEEEEc
Q 017431 252 LTDGGVDYSFECIG-----N-VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 252 ~~~gg~dvvid~~g-----~-~~~~~~~~~~l~~~~G~iv~~g 288 (371)
..++.||+|+.+-. . ...++.+.+.|+++ |+++...
T Consensus 78 ~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~~~~~~ 119 (234)
T d1xxla_ 78 FPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQD-GRFLLVD 119 (234)
T ss_dssp SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred ccccccceeeeeceeecccCHHHHHHHHHHeeCCC-cEEEEEE
Confidence 12347999986332 1 35689999999997 9988753
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=95.90 E-value=0.012 Score=49.81 Aligned_cols=81 Identities=10% Similarity=0.198 Sum_probs=51.4
Q ss_pred CCCCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcEEe--cCCCCCchHHHHHHhhc-
Q 017431 184 VEPGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFV--NPKDHDKPIQQVLVDLT- 253 (371)
Q Consensus 184 ~~~g~~VlI~Ga-g--~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~vi--~~~~~~~~~~~~~~~~~- 253 (371)
.-+|+++||+|+ | ++|.+.++.+...|+ +|+.++++++..+.++ +.+...++ +..+ +.+..+.+.+..
T Consensus 2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga-~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~ 79 (274)
T d2pd4a1 2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSK-EEHFKSLYNSVKK 79 (274)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTC-HHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhCCceeEeeecccc-hhhHHHHHHHHHH
Confidence 346899999986 5 699999999999999 8999998875443333 22222222 2222 122222222222
Q ss_pred -CCCccEEEEccCC
Q 017431 254 -DGGVDYSFECIGN 266 (371)
Q Consensus 254 -~gg~dvvid~~g~ 266 (371)
-+.+|+++++.+.
T Consensus 80 ~~g~id~lV~nag~ 93 (274)
T d2pd4a1 80 DLGSLDFIVHSVAF 93 (274)
T ss_dssp HTSCEEEEEECCCC
T ss_pred HcCCCCeEEeeccc
Confidence 2479999988875
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.90 E-value=0.018 Score=47.65 Aligned_cols=96 Identities=19% Similarity=0.296 Sum_probs=65.2
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc----CCc-EEecCCCCCchHHHHHHhh
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVT-EFVNPKDHDKPIQQVLVDL 252 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~----g~~-~vi~~~~~~~~~~~~~~~~ 252 (371)
++......+.++||=+|+|. |..+..+++ .|+ +|++++.+++-.+.+++. +.. .++. .+ +.++
T Consensus 33 ~~~~~~~~~~~~iLDiGcGt-G~~~~~l~~-~~~-~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~-~d--------~~~l 100 (251)
T d1wzna1 33 IFKEDAKREVRRVLDLACGT-GIPTLELAE-RGY-EVVGLDLHEEMLRVARRKAKERNLKIEFLQ-GD--------VLEI 100 (251)
T ss_dssp HHHHTCSSCCCEEEEETCTT-CHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEE-SC--------GGGC
T ss_pred HHHHhcCCCCCEEEEeCCCC-Cccchhhcc-cce-EEEEEeeccccccccccccccccccchhee-hh--------hhhc
Confidence 45556677888999999874 777777777 588 899999999877766542 332 2221 11 1222
Q ss_pred cCC-CccEEEEccCC---------HHHHHHHHHHhccCCceEEE
Q 017431 253 TDG-GVDYSFECIGN---------VSVMRAALECCHKGWGTSVI 286 (371)
Q Consensus 253 ~~g-g~dvvid~~g~---------~~~~~~~~~~l~~~~G~iv~ 286 (371)
.-. .||+|+...+. ...++.+.++|+++ |.++.
T Consensus 101 ~~~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~Lkpg-G~lii 143 (251)
T d1wzna1 101 AFKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPG-GVFIT 143 (251)
T ss_dssp CCCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEE-EEEEE
T ss_pred ccccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCC-cEEEE
Confidence 323 79999875432 13578899999997 98874
|
| >d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=95.90 E-value=0.0031 Score=51.94 Aligned_cols=97 Identities=15% Similarity=0.236 Sum_probs=61.9
Q ss_pred CCCCCCEEEEEcC--ChHHHHHHHHHHHcCC---CeEEEEcCChhhHHHHHh---------cCCcEE-ecCCCCCchHHH
Q 017431 183 KVEPGSIVAVFGL--GTVGLAVAEGAKAAGA---SRVIGIDIDPKKFDRAKN---------FGVTEF-VNPKDHDKPIQQ 247 (371)
Q Consensus 183 ~~~~g~~VlI~Ga--g~vG~~ai~la~~~g~---~~v~~v~~~~~~~~~~~~---------~g~~~v-i~~~~~~~~~~~ 247 (371)
.+++|++||.+|+ |-......+++...|+ .+|++++.+++-.+.+++ ++...+ +...+ .
T Consensus 77 ~l~~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d--~---- 150 (223)
T d1r18a_ 77 HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGD--G---- 150 (223)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESC--G----
T ss_pred ccCCCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEecc--c----
Confidence 7899999999977 4455555666666663 279999998876555532 122121 11111 0
Q ss_pred HHHhhc-CCCccEEEEccCCHHHHHHHHHHhccCCceEEEE
Q 017431 248 VLVDLT-DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 248 ~~~~~~-~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~ 287 (371)
..... .+.||.|+-+.+-++..+..++.|++| |++|..
T Consensus 151 -~~~~~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~g-G~lV~p 189 (223)
T d1r18a_ 151 -RKGYPPNAPYNAIHVGAAAPDTPTELINQLASG-GRLIVP 189 (223)
T ss_dssp -GGCCGGGCSEEEEEECSCBSSCCHHHHHTEEEE-EEEEEE
T ss_pred -ccccccccceeeEEEEeechhchHHHHHhcCCC-cEEEEE
Confidence 01111 137999887766656567888999997 999874
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=95.89 E-value=0.023 Score=47.02 Aligned_cols=102 Identities=14% Similarity=0.152 Sum_probs=63.4
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCC------eEEEEcCChhhHHHH----HhcCCcEE---ecCCCCCchHHHHHHhhc-
Q 017431 189 IVAVFGL-GTVGLAVAEGAKAAGAS------RVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT- 253 (371)
Q Consensus 189 ~VlI~Ga-g~vG~~ai~la~~~g~~------~v~~v~~~~~~~~~~----~~~g~~~v---i~~~~~~~~~~~~~~~~~- 253 (371)
.|||+|+ +++|.+.+..+...|++ .|+.+++++++.+.+ ++.|.... .|..+ ..+..+.+.+..
T Consensus 3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~-~~~v~~~~~~~~~ 81 (240)
T d2bd0a1 3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISD-MADVRRLTTHIVE 81 (240)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHH
Confidence 4688988 89999988888888984 288888888776543 33454322 23333 122222222222
Q ss_pred -CCCccEEEEccCCH-------------------------HHHHHHHHHhcc-CCceEEEEccCC
Q 017431 254 -DGGVDYSFECIGNV-------------------------SVMRAALECCHK-GWGTSVIVGVAA 291 (371)
Q Consensus 254 -~gg~dvvid~~g~~-------------------------~~~~~~~~~l~~-~~G~iv~~g~~~ 291 (371)
-|.+|+++++.|.. ...+.++..|.+ ++|++|.+++..
T Consensus 82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~ 146 (240)
T d2bd0a1 82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVA 146 (240)
T ss_dssp HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechh
Confidence 24799999988861 135566666642 238999987643
|
| >d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein BH2331 species: Bacillus halodurans [TaxId: 86665]
Probab=95.89 E-value=0.01 Score=48.68 Aligned_cols=101 Identities=20% Similarity=0.227 Sum_probs=68.0
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcE--EecCCCCCchHHHHHHh
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE--FVNPKDHDKPIQQVLVD 251 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~--vi~~~~~~~~~~~~~~~ 251 (371)
+.+..+++++++||=+|+| .|..+..+++. |+ +|++++.+++..+.++ +.+... ++.... .++ .
T Consensus 7 ll~~~~l~~~~rVLDiGcG-~G~~~~~l~~~-~~-~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~--~~l-----~ 76 (231)
T d1vl5a_ 7 LMQIAALKGNEEVLDVATG-GGHVANAFAPF-VK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA--EQM-----P 76 (231)
T ss_dssp HHHHHTCCSCCEEEEETCT-TCHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC---CC-----C
T ss_pred HHHhcCCCCcCEEEEeccc-CcHHHHHHHHh-CC-EEEEEECCHHHHhhhhhccccccccccccccccc--ccc-----c
Confidence 4577889999999999986 56667777754 77 8999999988766654 344432 222111 110 1
Q ss_pred hcCCCccEEEEccC-----C-HHHHHHHHHHhccCCceEEEEcc
Q 017431 252 LTDGGVDYSFECIG-----N-VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 252 ~~~gg~dvvid~~g-----~-~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
..++.||+|+..-. . ..++..+.+.|++| |+++....
T Consensus 77 ~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~l~i~~~ 119 (231)
T d1vl5a_ 77 FTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKG-GQLLLVDN 119 (231)
T ss_dssp SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred ccccccccccccccccccCCHHHHHHHHHHhcCCC-cEEEEEeC
Confidence 12347999986422 2 35689999999997 99987643
|
| >d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein FLJ20628 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.88 E-value=0.0023 Score=55.85 Aligned_cols=105 Identities=20% Similarity=0.237 Sum_probs=67.3
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----cC-----------CcEE-ecCCC
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FG-----------VTEF-VNPKD 240 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~v~~v~~~~~~~~~~~~----~g-----------~~~v-i~~~~ 240 (371)
+....+++||++||=.|+| .|.+++.+|++.|. .+|++++.+++..+.+++ ++ .+.+ +...+
T Consensus 90 Il~~l~i~pG~rVLE~GtG-sG~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~d 168 (324)
T d2b25a1 90 ILSMMDINPGDTVLEAGSG-SGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD 168 (324)
T ss_dssp HHHHHTCCTTCEEEEECCT-TSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred HHHHhCCCCCCEEEEeccc-ccHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEecc
Confidence 4567889999999988886 48888899998874 389999999988777653 11 1111 11111
Q ss_pred CCchHHHHHHhhcCCCccEEE-EccCCHHHHHHHHHHhccCCceEEEEc
Q 017431 241 HDKPIQQVLVDLTDGGVDYSF-ECIGNVSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 241 ~~~~~~~~~~~~~~gg~dvvi-d~~g~~~~~~~~~~~l~~~~G~iv~~g 288 (371)
.. ++ ......+.||.|| |.......+..+.+.|++| |+++.+.
T Consensus 169 i~-~~---~~~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpG-G~lv~~~ 212 (324)
T d2b25a1 169 IS-GA---TEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHG-GVCAVYV 212 (324)
T ss_dssp TT-CC---C-------EEEEEECSSSTTTTHHHHGGGEEEE-EEEEEEE
T ss_pred hh-hc---ccccCCCCcceEeecCcCHHHHHHHHHHhccCC-CEEEEEe
Confidence 00 00 0111122688666 4433335689999999997 9999874
|
| >d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Putative sarcosine dimethylglycine methyltransferase species: Red algae (Galdieria sulphuraria) [TaxId: 130081]
Probab=95.83 E-value=0.02 Score=48.58 Aligned_cols=102 Identities=16% Similarity=0.145 Sum_probs=69.2
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCc---EEecCCCCCchHHHHHH
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT---EFVNPKDHDKPIQQVLV 250 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~---~vi~~~~~~~~~~~~~~ 250 (371)
|....++.++++||=+|+| .|..+..+++..|+ +|++++.++...+.+++ .|.. .++...- .++
T Consensus 59 l~~~~~l~~~~~vLDiGcG-~G~~~~~la~~~~~-~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~--~~l----- 129 (282)
T d2o57a1 59 LAMTGVLQRQAKGLDLGAG-YGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSF--LEI----- 129 (282)
T ss_dssp HHHTTCCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCT--TSC-----
T ss_pred HHHhcCCCCCCEEEEeCCC-CcHHHhhhhccCCc-EEEEEeccchhhhhhhccccccccccccccccccc--ccc-----
Confidence 4566789999999999886 56677788888898 89999999987666654 3432 1221111 000
Q ss_pred hhcCCCccEEEEcc-----CC-HHHHHHHHHHhccCCceEEEEcc
Q 017431 251 DLTDGGVDYSFECI-----GN-VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 251 ~~~~gg~dvvid~~-----g~-~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
....+.||+|+..- .. ..++..+.+.|+++ |+++....
T Consensus 130 ~~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~Lkpg-G~l~~~~~ 173 (282)
T d2o57a1 130 PCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPR-GVMAITDP 173 (282)
T ss_dssp SSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred cccccccchhhccchhhhccCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence 11123799998632 22 34689999999997 99887643
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=95.81 E-value=0.049 Score=41.40 Aligned_cols=81 Identities=25% Similarity=0.217 Sum_probs=55.6
Q ss_pred EEEEEcCChHHHHHHH-HHHHcCCCeEEEEcCChhhHHHHH-hcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCC
Q 017431 189 IVAVFGLGTVGLAVAE-GAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 266 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~-la~~~g~~~v~~v~~~~~~~~~~~-~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~ 266 (371)
+|.++|+|.+|.+.++ |.+. |..++++.++++++.+.+. ++|.. +.+..+ . . ...|++|=|+-
T Consensus 2 kI~fIG~G~MG~ai~~~l~~~-~~~~i~v~~r~~~~~~~l~~~~~~~-~~~~~~---~-------v--~~~Div~lavk- 66 (152)
T d1yqga2 2 NVYFLGGGNMAAAVAGGLVKQ-GGYRIYIANRGAEKRERLEKELGVE-TSATLP---E-------L--HSDDVLILAVK- 66 (152)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-CSCEEEEECSSHHHHHHHHHHTCCE-EESSCC---C-------C--CTTSEEEECSC-
T ss_pred EEEEEcCcHHHHHHHHHHHHC-CCCcEEEEeCChhHHHHhhhhcccc-cccccc---c-------c--cccceEEEecC-
Confidence 5888999999998776 5554 5349999999999887665 46653 332222 0 1 14789998876
Q ss_pred HHHHHHHHHHhccCCceEE
Q 017431 267 VSVMRAALECCHKGWGTSV 285 (371)
Q Consensus 267 ~~~~~~~~~~l~~~~G~iv 285 (371)
|..+...++.+.+. +.++
T Consensus 67 P~~~~~v~~~l~~~-~~~v 84 (152)
T d1yqga2 67 PQDMEAACKNIRTN-GALV 84 (152)
T ss_dssp HHHHHHHHTTCCCT-TCEE
T ss_pred HHHHHHhHHHHhhc-ccEE
Confidence 45677777777764 5544
|
| >d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Precorrin-6Y methyltransferase (CbiT) domain: Precorrin-6Y methyltransferase (CbiT) species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=95.74 E-value=0.0095 Score=47.35 Aligned_cols=99 Identities=17% Similarity=0.223 Sum_probs=63.7
Q ss_pred hhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCc-E--EecCCCCCchHHHHHHh
Q 017431 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT-E--FVNPKDHDKPIQQVLVD 251 (371)
Q Consensus 179 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~-~--vi~~~~~~~~~~~~~~~ 251 (371)
....++++|++||=+|+| .|..++.+|+. +. +|++++.+++..+.+++ +|.. . ++. .+..+....
T Consensus 26 l~~l~~~~g~~VLDiGcG-sG~~s~~lA~~-~~-~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~-----gda~~~~~~ 97 (186)
T d1l3ia_ 26 MCLAEPGKNDVAVDVGCG-TGGVTLELAGR-VR-RVYAIDRNPEAISTTEMNLQRHGLGDNVTLME-----GDAPEALCK 97 (186)
T ss_dssp HHHHCCCTTCEEEEESCT-TSHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEE-----SCHHHHHTT
T ss_pred HHhcCCCCCCEEEEEECC-eEccccccccc-ce-EEEEecCCHHHHHHHHHHHHHcCCCcceEEEE-----Cchhhcccc
Confidence 345688999999988774 24444556654 44 89999999987776653 5542 2 221 122222211
Q ss_pred hcCCCccEEEEccCC---HHHHHHHHHHhccCCceEEEEc
Q 017431 252 LTDGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 252 ~~~gg~dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~g 288 (371)
...+|.++..... ...++.+.+.|+++ |+++...
T Consensus 98 --~~~~D~v~~~~~~~~~~~~~~~~~~~Lkpg-G~lvi~~ 134 (186)
T d1l3ia_ 98 --IPDIDIAVVGGSGGELQEILRIIKDKLKPG-GRIIVTA 134 (186)
T ss_dssp --SCCEEEEEESCCTTCHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred --cCCcCEEEEeCccccchHHHHHHHHHhCcC-CEEEEEe
Confidence 1379988864432 35578888999997 9987653
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=95.62 E-value=0.022 Score=43.64 Aligned_cols=94 Identities=29% Similarity=0.362 Sum_probs=67.4
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEE
Q 017431 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSF 261 (371)
Q Consensus 182 ~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvi 261 (371)
.-+-.|++++|.|=|-+|.-.++-++.+|+ +|++++.++-+.=.+.--|. .+. ...+.+ ...|+++
T Consensus 18 ~~~laGk~vvV~GYG~vGrG~A~~~rg~Ga-~V~V~E~DPi~alqA~mdGf-~v~-------~~~~a~-----~~aDi~v 83 (163)
T d1v8ba1 18 DFLISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGF-NVV-------TLDEIV-----DKGDFFI 83 (163)
T ss_dssp CCCCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTC-EEC-------CHHHHT-----TTCSEEE
T ss_pred CceecCCEEEEecccccchhHHHHHHhCCC-EEEEEecCchhhHHHHhcCC-ccC-------chhHcc-----ccCcEEE
Confidence 345789999999999999999999999999 99999999865333322222 222 122222 2589999
Q ss_pred EccCCHHH-HHHHHHHhccCCceEEEEccC
Q 017431 262 ECIGNVSV-MRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 262 d~~g~~~~-~~~~~~~l~~~~G~iv~~g~~ 290 (371)
-++|..+. -..-++.|+++ ..+.-.|-+
T Consensus 84 TaTGn~~vI~~~h~~~MKdg-aIl~N~GHf 112 (163)
T d1v8ba1 84 TCTGNVDVIKLEHLLKMKNN-AVVGNIGHF 112 (163)
T ss_dssp ECCSSSSSBCHHHHTTCCTT-CEEEECSST
T ss_pred EcCCCCccccHHHHHHhhCC-eEEEecccc
Confidence 99999764 46668888885 666655554
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=95.57 E-value=0.081 Score=40.52 Aligned_cols=87 Identities=16% Similarity=0.236 Sum_probs=61.2
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHH
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 268 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~ 268 (371)
+|-|+|.|.+|...+.-+...|+ .|++.++++++.+.+.+.+... . .+..+.++ ..|++|-|+..+.
T Consensus 2 kIgiIGlG~MG~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~-~------~~~~e~~~-----~~d~ii~~v~~~~ 68 (161)
T d1vpda2 2 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAET-A------STAKAIAE-----QCDVIITMLPNSP 68 (161)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE-C------SSHHHHHH-----HCSEEEECCSSHH
T ss_pred EEEEEehhHHHHHHHHHHHHCCC-eEEEEeCCcchhHHHHHhhhhh-c------ccHHHHHh-----CCCeEEEEcCCHH
Confidence 57789999999998887777899 8999999999999888887632 1 12222222 3889999998766
Q ss_pred HHHHHH-------HHhccCCceEEEEcc
Q 017431 269 VMRAAL-------ECCHKGWGTSVIVGV 289 (371)
Q Consensus 269 ~~~~~~-------~~l~~~~G~iv~~g~ 289 (371)
..+..+ ..+.++ ..++.++.
T Consensus 69 ~v~~v~~~~~~~~~~~~~g-~iiid~sT 95 (161)
T d1vpda2 69 HVKEVALGENGIIEGAKPG-TVLIDMSS 95 (161)
T ss_dssp HHHHHHHSTTCHHHHCCTT-CEEEECSC
T ss_pred HHHHHHhCCcchhhccCCC-CEEEECCC
Confidence 555543 334453 55555544
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=95.56 E-value=0.031 Score=44.66 Aligned_cols=87 Identities=17% Similarity=0.154 Sum_probs=58.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
.|++|.|+|.|.+|...+++++.+|+ +|++.++..+..... .+.. . .++.+.+.+ .|++..++.
T Consensus 42 ~gk~vgIiG~G~IG~~va~~l~~fg~-~V~~~d~~~~~~~~~--~~~~----~----~~l~~~l~~-----sDii~~~~p 105 (197)
T d1j4aa1 42 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPELEK--KGYY----V----DSLDDLYKQ-----ADVISLHVP 105 (197)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHH--TTCB----C----SCHHHHHHH-----CSEEEECSC
T ss_pred cCCeEEEecccccchhHHHhHhhhcc-cccccCccccccccc--ceee----e----ccccccccc-----cccccccCC
Confidence 57999999999999999999999999 999998765533221 1211 1 234444433 788887655
Q ss_pred C-HH---H-HHHHHHHhccCCceEEEEcc
Q 017431 266 N-VS---V-MRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 266 ~-~~---~-~~~~~~~l~~~~G~iv~~g~ 289 (371)
. ++ . -...++.|+++ ..+|-++.
T Consensus 106 lt~~T~~li~~~~l~~mk~~-a~lIN~sR 133 (197)
T d1j4aa1 106 DVPANVHMINDESIAKMKQD-VVIVNVSR 133 (197)
T ss_dssp CCGGGTTCBSHHHHHHSCTT-EEEEECSC
T ss_pred ccccccccccHHHHhhhCCc-cEEEecCc
Confidence 3 11 1 25667888886 77776644
|
| >d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.52 E-value=0.038 Score=49.26 Aligned_cols=106 Identities=18% Similarity=0.194 Sum_probs=69.3
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc---------------CCcEE-ecCCCC
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF---------------GVTEF-VNPKDH 241 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~---------------g~~~v-i~~~~~ 241 (371)
+.+..++++|+++|=+|+| +|..+.++|+..|+.+|++++.++...+.+++. +.... +.....
T Consensus 208 Il~~l~Lkpgd~fLDLGCG-~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~~f~ 286 (406)
T d1u2za_ 208 VYQQCQLKKGDTFMDLGSG-VGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFV 286 (406)
T ss_dssp HHHHTTCCTTCEEEEESCT-TSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCST
T ss_pred HHHHhCCCCCCEEEeCCCC-CcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeeeechh
Confidence 4677889999998888887 799999999999987899999999876666431 11111 111111
Q ss_pred CchHHHHHHhhcCCCccEEEEc-c-CC---HHHHHHHHHHhccCCceEEEEcc
Q 017431 242 DKPIQQVLVDLTDGGVDYSFEC-I-GN---VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 242 ~~~~~~~~~~~~~gg~dvvid~-~-g~---~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
......... ..+|+++-. . -. ...+...++.|++| |++|....
T Consensus 287 ~~~~~d~~~----~~adVV~inn~~f~~~l~~~L~ei~r~LKPG-GrIVs~~~ 334 (406)
T d1u2za_ 287 DNNRVAELI----PQCDVILVNNFLFDEDLNKKVEKILQTAKVG-CKIISLKS 334 (406)
T ss_dssp TCHHHHHHG----GGCSEEEECCTTCCHHHHHHHHHHHTTCCTT-CEEEESSC
T ss_pred hcccccccc----ccceEEEEecccCchHHHHHHHHHHHhcCCC-cEEEEecc
Confidence 122222211 147887742 1 12 23477888889997 99987643
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=95.48 E-value=0.022 Score=47.71 Aligned_cols=83 Identities=13% Similarity=0.216 Sum_probs=52.7
Q ss_pred CCCCCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhhH-H-HHHhcCCcEE---ecCCCC--CchHHHHHHhh
Q 017431 183 KVEPGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPKKF-D-RAKNFGVTEF---VNPKDH--DKPIQQVLVDL 252 (371)
Q Consensus 183 ~~~~g~~VlI~Ga-g--~vG~~ai~la~~~g~~~v~~v~~~~~~~-~-~~~~~g~~~v---i~~~~~--~~~~~~~~~~~ 252 (371)
++-+|+++||+|+ | ++|.+.++-+...|+ +|+.+.+++++. + ..++++.... .|..+. .....+.+.+.
T Consensus 2 ~~l~gK~~lItGaag~~GIG~aiA~~la~~Ga-~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~ 80 (268)
T d2h7ma1 2 GLLDGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEA 80 (268)
T ss_dssp CTTTTCEEEECCCSSTTCHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhc
Confidence 4567899999985 4 599998888889999 888888877654 3 3345554321 222220 01222333333
Q ss_pred cCC--CccEEEEccCC
Q 017431 253 TDG--GVDYSFECIGN 266 (371)
Q Consensus 253 ~~g--g~dvvid~~g~ 266 (371)
... ..|+++++.+.
T Consensus 81 ~~~~~~ld~~i~~ag~ 96 (268)
T d2h7ma1 81 IGAGNKLDGVVHSIGF 96 (268)
T ss_dssp HCTTCCEEEEEECCCC
T ss_pred cccCCCcceeeecccc
Confidence 332 68999998873
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=95.47 E-value=0.015 Score=46.83 Aligned_cols=80 Identities=28% Similarity=0.301 Sum_probs=57.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
-.|++|+|.|.|.+|..+.+++...|+ +|++++.+.++......+|... +... +......|+.+=|.
T Consensus 25 L~gk~v~IqG~G~VG~~~A~~L~~~Ga-kvvv~d~d~~~~~~~~~~g~~~-~~~~-----------~~~~~~~DI~iPcA 91 (201)
T d1c1da1 25 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTA-VALE-----------DVLSTPCDVFAPCA 91 (201)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE-CCGG-----------GGGGCCCSEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEecchHHHHHHHHhhcccc-cCcc-----------ccccccceeeeccc
Confidence 478999999999999999999999999 9999999999888888888643 2111 11222678777555
Q ss_pred CCHHHHHHHHHHh
Q 017431 265 GNVSVMRAALECC 277 (371)
Q Consensus 265 g~~~~~~~~~~~l 277 (371)
.+...-....+.+
T Consensus 92 ~~~~I~~~~a~~i 104 (201)
T d1c1da1 92 MGGVITTEVARTL 104 (201)
T ss_dssp CSCCBCHHHHHHC
T ss_pred ccccccHHHHhhh
Confidence 5423233344444
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.36 E-value=0.02 Score=47.02 Aligned_cols=106 Identities=13% Similarity=0.045 Sum_probs=65.6
Q ss_pred hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE-------------EecCCCCCchH-
Q 017431 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-------------FVNPKDHDKPI- 245 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~-------------vi~~~~~~~~~- 245 (371)
....+.++.+||..|+|. |..+..+|+ .|+ .|++++.+++..+.+++..... .........++
T Consensus 39 ~~l~~~~~~rvLd~GCG~-G~~a~~LA~-~G~-~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 115 (229)
T d2bzga1 39 TFLKGKSGLRVFFPLCGK-AVEMKWFAD-RGH-SVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLY 115 (229)
T ss_dssp HHHTTCCSCEEEETTCTT-CTHHHHHHH-TTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEE
T ss_pred HhcCCCCCCEEEEeCCCC-cHHHHHHHh-CCC-cEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEE
Confidence 344678899999998873 777778876 599 9999999999887776432211 10000000000
Q ss_pred HHHHHhh---cCCCccEEEEccCC--------HHHHHHHHHHhccCCceEEEEcc
Q 017431 246 QQVLVDL---TDGGVDYSFECIGN--------VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 246 ~~~~~~~---~~gg~dvvid~~g~--------~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
...+..+ ..+.+|+|+++..- ...+..+.++|+++ |+++....
T Consensus 116 ~~d~~~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~Lkpg-G~~~l~~~ 169 (229)
T d2bzga1 116 CCSIFDLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKK-FQYLLCVL 169 (229)
T ss_dssp ESCGGGGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred EcchhhccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCc-ceEEEEEc
Confidence 0001111 12368999986432 34578889999997 98776644
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.31 E-value=0.014 Score=48.65 Aligned_cols=48 Identities=27% Similarity=0.366 Sum_probs=39.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCc
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVT 233 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~g~~ 233 (371)
-+|+++||+|+ +++|.+.++-+...|+ +|+.+++++++.+ .+++++..
T Consensus 3 lkGKvalITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~ 52 (248)
T d2o23a1 3 VKGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNN 52 (248)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCC
Confidence 37899999988 8999999999999999 8999998887665 44566653
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=95.28 E-value=0.043 Score=45.62 Aligned_cols=82 Identities=18% Similarity=0.231 Sum_probs=51.3
Q ss_pred CCCCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcEEecCCCC-CchHHHHHHhhcC-
Q 017431 184 VEPGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDH-DKPIQQVLVDLTD- 254 (371)
Q Consensus 184 ~~~g~~VlI~Ga-g--~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~vi~~~~~-~~~~~~~~~~~~~- 254 (371)
.-+|+++||+|+ | ++|.+.+..+...|+ +|+.+.++++..+.+. ..+....+..... ..+......+...
T Consensus 2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (258)
T d1qsga_ 2 FLSGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV 80 (258)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred cCCCCEEEEECCCCchhHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhc
Confidence 357899999987 6 688888888889999 8888888876554443 3444333322221 1222222333222
Q ss_pred -CCccEEEEccCC
Q 017431 255 -GGVDYSFECIGN 266 (371)
Q Consensus 255 -gg~dvvid~~g~ 266 (371)
+..|+.+++++.
T Consensus 81 ~~~~d~~v~~a~~ 93 (258)
T d1qsga_ 81 WPKFDGFVHSIGF 93 (258)
T ss_dssp CSSEEEEEECCCC
T ss_pred ccccceEEEeecc
Confidence 278999987654
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=95.16 E-value=0.017 Score=42.34 Aligned_cols=38 Identities=32% Similarity=0.588 Sum_probs=33.4
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
++++++|+|+|+|.+|+-++..++..|. +|+.+.+.+.
T Consensus 27 ~~~~~~vvIIGgG~iG~E~A~~l~~~g~-~Vtli~~~~~ 64 (121)
T d1d7ya2 27 LRPQSRLLIVGGGVIGLELAATARTAGV-HVSLVETQPR 64 (121)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred hhcCCeEEEECcchhHHHHHHHhhcccc-eEEEEeeccc
Confidence 4567999999999999999999999999 8999987664
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=95.15 E-value=0.11 Score=39.77 Aligned_cols=93 Identities=20% Similarity=0.273 Sum_probs=55.3
Q ss_pred CEEEEEcCChHHH-HHHHHHHHcCCCeEEEE-cCChh--hHHHHHhcCCcEEecCCCCCchHHHHHHhhcCC-CccEEEE
Q 017431 188 SIVAVFGLGTVGL-AVAEGAKAAGASRVIGI-DIDPK--KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFE 262 (371)
Q Consensus 188 ~~VlI~Gag~vG~-~ai~la~~~g~~~v~~v-~~~~~--~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~g-g~dvvid 262 (371)
-+|.|+|+|.+|. ..+++.+....-.++++ +++.+ ...+++++|..... . ..+.+.+...- ++|+||.
T Consensus 5 irvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~------~-~~d~l~~~~~~~~iDiVf~ 77 (157)
T d1nvmb1 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY------A-GVEGLIKLPEFADIDFVFD 77 (157)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES------S-HHHHHHHSGGGGGEEEEEE
T ss_pred cEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccc------c-ceeeeeecccccccCEEEE
Confidence 3788999999986 56788877654356665 44443 45677888875322 1 22333333322 7999999
Q ss_pred ccCCHHHHHH--HHHHhccCCceEEEEc
Q 017431 263 CIGNVSVMRA--ALECCHKGWGTSVIVG 288 (371)
Q Consensus 263 ~~g~~~~~~~--~~~~l~~~~G~iv~~g 288 (371)
+++....... +.+.+..| -.+++..
T Consensus 78 ATpag~h~~~~~~~~aa~~G-~~VID~s 104 (157)
T d1nvmb1 78 ATSASAHVQNEALLRQAKPG-IRLIDLT 104 (157)
T ss_dssp CSCHHHHHHHHHHHHHHCTT-CEEEECS
T ss_pred cCCchhHHHhHHHHHHHHcC-CEEEEcc
Confidence 9876433443 34445553 4454443
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=95.14 E-value=0.0064 Score=47.15 Aligned_cols=90 Identities=13% Similarity=0.128 Sum_probs=54.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE--EecCCCCCchHHHHHHhhcCCCccEEEEccCC
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 266 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~--vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~ 266 (371)
+|+|+|+|.+|.+....+...|. .|..+++++++.+.....+... ...... .+..+.+ +.+|++|-++-.
T Consensus 2 kI~IiGaG~iG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-----~~~D~iii~vka 73 (167)
T d1ks9a2 2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVPQPYCSVNLVETDGSIFNESLT--ANDPDFL-----ATSDLLLVTLKA 73 (167)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSEEEEEEECTTSCEEEEEEE--ESCHHHH-----HTCSEEEECSCG
T ss_pred EEEEECcCHHHHHHHHHHHHCCC-ceEEEEcCHHHhhhhccccCCccccccccc--cchhhhh-----cccceEEEeecc
Confidence 68999999999998877777899 8999988877544332222211 000000 1111111 269999999888
Q ss_pred HHHHHHHHH----HhccCCceEEEEc
Q 017431 267 VSVMRAALE----CCHKGWGTSVIVG 288 (371)
Q Consensus 267 ~~~~~~~~~----~l~~~~G~iv~~g 288 (371)
.. .+.+++ .++++ ..++.+.
T Consensus 74 ~~-~~~~~~~l~~~~~~~-~~Iv~~q 97 (167)
T d1ks9a2 74 WQ-VSDAVKSLASTLPVT-TPILLIH 97 (167)
T ss_dssp GG-HHHHHHHHHTTSCTT-SCEEEEC
T ss_pred cc-hHHHHHhhccccCcc-cEEeecc
Confidence 54 444443 44453 5566653
|
| >d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=95.06 E-value=0.038 Score=47.04 Aligned_cols=99 Identities=18% Similarity=0.148 Sum_probs=66.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC---------cEEecCCCCCchHHHHHHhhcCC
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV---------TEFVNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~---------~~vi~~~~~~~~~~~~~~~~~~g 255 (371)
...++|||+|.|. |.++-.+++..+.++|.+++.+++-.+.++++-. ..-+.. .+..+.+++...+
T Consensus 79 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~----~Da~~~l~~~~~~ 153 (290)
T d1xj5a_ 79 PNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI----GDGVAFLKNAAEG 153 (290)
T ss_dssp SCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE----SCHHHHHHTSCTT
T ss_pred CCCcceEEecCCc-hHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEE----ccHHHHHhhcccc
Confidence 3457999997643 4445577777777799999999998888877431 111111 2334455554444
Q ss_pred CccEEE-EccC---------CHHHHHHHHHHhccCCceEEEEcc
Q 017431 256 GVDYSF-ECIG---------NVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 256 g~dvvi-d~~g---------~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
.+|+|+ |+.. +.+.++.+.++|+++ |.++.-..
T Consensus 154 ~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~-Gi~v~q~~ 196 (290)
T d1xj5a_ 154 SYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPG-GVVCTQAE 196 (290)
T ss_dssp CEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEE-EEEEEECC
T ss_pred CccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCC-cEEEEecC
Confidence 899777 4443 245789999999997 99987643
|
| >d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.05 E-value=0.064 Score=43.20 Aligned_cols=102 Identities=15% Similarity=0.076 Sum_probs=65.2
Q ss_pred hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcEEecCCCCCchHHHHHHhhcCC
Q 017431 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~~~~~~g 255 (371)
....++||++||=+|+| .|..+..+++..+-.+|++++.+++..+.++ +.+....+......... ......
T Consensus 50 ~~l~lkpg~~VLDlGcG-~G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~----~~~~~~ 124 (209)
T d1nt2a_ 50 HRLKLRGDERVLYLGAA-SGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWK----YSGIVE 124 (209)
T ss_dssp CCCCCCSSCEEEEETCT-TSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGG----TTTTCC
T ss_pred ccCCCCCCCEEEEeCCc-CCHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccc----cccccc
Confidence 34679999999999885 3556777787777559999999998776554 34433333222211111 011111
Q ss_pred CccEEEEccCCH----HHHHHHHHHhccCCceEEEE
Q 017431 256 GVDYSFECIGNV----SVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 256 g~dvvid~~g~~----~~~~~~~~~l~~~~G~iv~~ 287 (371)
.+|+++.....+ ..+..+.+.|+++ |.++..
T Consensus 125 ~vd~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~ 159 (209)
T d1nt2a_ 125 KVDLIYQDIAQKNQIEILKANAEFFLKEK-GEVVIM 159 (209)
T ss_dssp CEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred eEEEEEecccChhhHHHHHHHHHHHhccC-CeEEEE
Confidence 578887655432 3477888999997 998766
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=95.03 E-value=0.039 Score=44.71 Aligned_cols=72 Identities=17% Similarity=0.139 Sum_probs=45.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHHhcCCcEE-ecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~-~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
.+|||+|+ |.+|...+..+...|.+ .|+...+++++.+.+.. +...+ .+..+ .. .+.+.. .++|.++++.
T Consensus 4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~-~~~~~~~d~~~--~~---~~~~~~-~~~d~vi~~a 76 (252)
T d2q46a1 4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-EADVFIGDITD--AD---SINPAF-QGIDALVILT 76 (252)
T ss_dssp CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC-CTTEEECCTTS--HH---HHHHHH-TTCSEEEECC
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC-CcEEEEeeecc--cc---cccccc-ccceeeEEEE
Confidence 68999988 99999999999998863 46667777776554332 23222 22222 22 222222 2589999887
Q ss_pred CC
Q 017431 265 GN 266 (371)
Q Consensus 265 g~ 266 (371)
+.
T Consensus 77 ~~ 78 (252)
T d2q46a1 77 SA 78 (252)
T ss_dssp CC
T ss_pred ee
Confidence 53
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.97 E-value=0.078 Score=44.89 Aligned_cols=101 Identities=21% Similarity=0.241 Sum_probs=57.9
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCe--EEEEcCChhhHH----HHHhc---CCcE---EecCCCCCchHHHHHHhhcCC
Q 017431 189 IVAVFGL-GTVGLAVAEGAKAAGASR--VIGIDIDPKKFD----RAKNF---GVTE---FVNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 189 ~VlI~Ga-g~vG~~ai~la~~~g~~~--v~~v~~~~~~~~----~~~~~---g~~~---vi~~~~~~~~~~~~~~~~~~g 255 (371)
.|||+|+ +++|.+.+..+...|++. |..+.++.++.+ .++++ +... ..|..+ ..+....+.+...+
T Consensus 4 VvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~g 82 (285)
T d1jtva_ 4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRD-SKSVAAARERVTEG 82 (285)
T ss_dssp EEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTC-HHHHHHHHHTCTTS
T ss_pred EEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccc-hHhhhhhhhhcccc
Confidence 4577788 999999888888889842 333344433332 23333 2222 133333 23333344444445
Q ss_pred CccEEEEccCCH-------------------------HHHHHHHHHhc-cCCceEEEEccC
Q 017431 256 GVDYSFECIGNV-------------------------SVMRAALECCH-KGWGTSVIVGVA 290 (371)
Q Consensus 256 g~dvvid~~g~~-------------------------~~~~~~~~~l~-~~~G~iv~~g~~ 290 (371)
..|+++++.|.. .+.+.++..|. .++|++|.+++.
T Consensus 83 ~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~ 143 (285)
T d1jtva_ 83 RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSV 143 (285)
T ss_dssp CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEG
T ss_pred chhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEech
Confidence 899999988751 13445555553 223999999764
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=94.92 E-value=0.011 Score=46.91 Aligned_cols=36 Identities=17% Similarity=0.218 Sum_probs=31.8
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
+++|+|+|+|+.|+.++..+...|++.|+++++.+.
T Consensus 4 ~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~~ 39 (196)
T d1gtea4 4 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEY 39 (196)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence 589999999999999999999999966888887664
|
| >d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 3, PRMT3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.92 E-value=0.044 Score=47.11 Aligned_cols=44 Identities=27% Similarity=0.453 Sum_probs=33.0
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK 223 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~ 223 (371)
+.+...+.+|++||-+|+| .|..++.+|+ .|+++|++++.++.-
T Consensus 27 i~~~~~~~~~~~VLDiGcG-~G~lsl~aa~-~Ga~~V~aid~s~~~ 70 (311)
T d2fyta1 27 IYQNPHIFKDKVVLDVGCG-TGILSMFAAK-AGAKKVLGVDQSEIL 70 (311)
T ss_dssp HHHCGGGTTTCEEEEETCT-TSHHHHHHHH-TTCSEEEEEESSTHH
T ss_pred HHhccccCCcCEEEEECCC-CCHHHHHHHH-cCCCEEEEEeCHHHH
Confidence 4445566789999999887 5666666665 488799999988753
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=94.75 E-value=0.034 Score=46.09 Aligned_cols=77 Identities=9% Similarity=0.187 Sum_probs=47.5
Q ss_pred CEEEEEcC-ChHHHHHHHHHH---HcCCCeEEEEcCChhhHHHHHh---cCCc-EE--ecCCCCCchHHHH---HHhhcC
Q 017431 188 SIVAVFGL-GTVGLAVAEGAK---AAGASRVIGIDIDPKKFDRAKN---FGVT-EF--VNPKDHDKPIQQV---LVDLTD 254 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~---~~g~~~v~~v~~~~~~~~~~~~---~g~~-~v--i~~~~~~~~~~~~---~~~~~~ 254 (371)
++|||+|+ +++|.+.++.+. ..|+ +|+++.+++++.+.+++ .+.. .+ .|..+ .....+. +.....
T Consensus 3 KtilITGas~GIG~a~a~~l~~~a~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~-~~~v~~~~~~i~~~~~ 80 (248)
T d1snya_ 3 NSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRN-FDAYDKLVADIEGVTK 80 (248)
T ss_dssp SEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTC-GGGHHHHHHHHHHHHG
T ss_pred CEEEEeCCCCHHHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHhcCCcEEEEEEEecc-HHHHHHHHhhhHHHhh
Confidence 58999988 899998775543 3577 89999998887654432 2222 22 33333 1223222 322323
Q ss_pred -CCccEEEEccCC
Q 017431 255 -GGVDYSFECIGN 266 (371)
Q Consensus 255 -gg~dvvid~~g~ 266 (371)
+++|+++++.|.
T Consensus 81 ~~~iDiLvnNAg~ 93 (248)
T d1snya_ 81 DQGLNVLFNNAGI 93 (248)
T ss_dssp GGCCSEEEECCCC
T ss_pred cCCcceEEeeccc
Confidence 379999998774
|
| >d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=94.69 E-value=0.17 Score=41.23 Aligned_cols=102 Identities=16% Similarity=0.174 Sum_probs=64.4
Q ss_pred hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc----CCcEEecCCCCCchHHHHHHhhcCC
Q 017431 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~~~~~~~~g 255 (371)
+...++||++||=+|+| .|..+..+++...-..|++++.+++..+.+++. +....+........ ..... ..
T Consensus 68 ~~l~ikpG~~VLDlGcG-sG~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~---~~~~~-~~ 142 (230)
T d1g8sa_ 68 KVMPIKRDSKILYLGAS-AGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQ---EYANI-VE 142 (230)
T ss_dssp CCCCCCTTCEEEEESCC-SSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGG---GGTTT-CC
T ss_pred HhCCCCCCCEEEEeCEE-cCHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCc---ccccc-cc
Confidence 56789999999999985 466777777765445999999999877766543 22222222221111 01111 11
Q ss_pred CccEEEEccCC----HHHHHHHHHHhccCCceEEEE
Q 017431 256 GVDYSFECIGN----VSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 256 g~dvvid~~g~----~~~~~~~~~~l~~~~G~iv~~ 287 (371)
.+|+++..... ...+..+.+.|+++ |.++..
T Consensus 143 ~v~~i~~~~~~~~~~~~~l~~~~r~LKpg-G~~~i~ 177 (230)
T d1g8sa_ 143 KVDVIYEDVAQPNQAEILIKNAKWFLKKG-GYGMIA 177 (230)
T ss_dssp CEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred eeEEeeccccchHHHHHHHHHHHHhcccC-ceEEEE
Confidence 56667765543 23477888889997 988765
|
| >d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical protein PH0226 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=94.69 E-value=0.057 Score=43.49 Aligned_cols=93 Identities=17% Similarity=0.210 Sum_probs=60.2
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCcE-EecCCCCCchHHHHHHhhcCCCcc
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE-FVNPKDHDKPIQQVLVDLTDGGVD 258 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~~-vi~~~~~~~~~~~~~~~~~~gg~d 258 (371)
++++.+||=+|+| .|..+..+++ .|+ +|++++.+++..+.+++ .+... .+.... .++ ...++.+|
T Consensus 35 l~~~~~ILDiGcG-~G~~~~~la~-~~~-~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~--~~l-----~~~~~~fD 104 (226)
T d1ve3a1 35 MKKRGKVLDLACG-VGGFSFLLED-YGF-EVVGVDISEDMIRKAREYAKSRESNVEFIVGDA--RKL-----SFEDKTFD 104 (226)
T ss_dssp CCSCCEEEEETCT-TSHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCT--TSC-----CSCTTCEE
T ss_pred cCCCCEEEEECCC-cchhhhhHhh-hhc-ccccccccccchhhhhhhhcccccccccccccc--ccc-----cccCcCce
Confidence 4678899999986 3667778876 477 89999999987776654 33221 221111 000 11123799
Q ss_pred EEEEccCC--------HHHHHHHHHHhccCCceEEEE
Q 017431 259 YSFECIGN--------VSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 259 vvid~~g~--------~~~~~~~~~~l~~~~G~iv~~ 287 (371)
+|+....- ..+++.+.+.|++| |+++..
T Consensus 105 ~I~~~~~l~~~~~~d~~~~l~~i~~~Lkpg-G~lii~ 140 (226)
T d1ve3a1 105 YVIFIDSIVHFEPLELNQVFKEVRRVLKPS-GKFIMY 140 (226)
T ss_dssp EEEEESCGGGCCHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred EEEEecchhhCChhHHHHHHHHHHHHcCcC-cEEEEE
Confidence 98863321 13588899999997 998754
|
| >d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=94.67 E-value=0.07 Score=43.56 Aligned_cols=102 Identities=17% Similarity=0.238 Sum_probs=67.0
Q ss_pred hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----cCCcEEecCCCCCchHHHHHHhhcC
Q 017431 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~v~~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~~ 254 (371)
+...++||++||=+|+| .|..+..+++..|. .+|++++.+++..+.+++ .+....+........ .. ....
T Consensus 67 ~~l~i~pG~~VLDlGaG-sG~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~---~~-~~~~ 141 (227)
T d1g8aa_ 67 KNFPIKPGKSVLYLGIA-SGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPE---EY-RALV 141 (227)
T ss_dssp CCCCCCTTCEEEEETTT-STTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGG---GG-TTTC
T ss_pred cccccCCCCEEEEeccC-CCHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCcc---cc-cccc
Confidence 56789999999999886 47778888888873 489999999987766643 333222222211111 11 1111
Q ss_pred CCccEEEEccCCH----HHHHHHHHHhccCCceEEEE
Q 017431 255 GGVDYSFECIGNV----SVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 255 gg~dvvid~~g~~----~~~~~~~~~l~~~~G~iv~~ 287 (371)
..+|+++.....+ ..+..+.+.|+++ |.++..
T Consensus 142 ~~vD~i~~d~~~~~~~~~~l~~~~~~Lkpg-G~lvi~ 177 (227)
T d1g8aa_ 142 PKVDVIFEDVAQPTQAKILIDNAEVYLKRG-GYGMIA 177 (227)
T ss_dssp CCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred cceEEEEEEccccchHHHHHHHHHHhcccC-CeEEEE
Confidence 2689888655432 3578888999997 988765
|
| >d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein PH1915, middle and C-terminal domains species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=94.66 E-value=0.025 Score=49.16 Aligned_cols=98 Identities=29% Similarity=0.346 Sum_probs=61.0
Q ss_pred CCCCCEEEEEcC--ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCcE-E-ecCCCCCchHHHHHHhhc-C
Q 017431 184 VEPGSIVAVFGL--GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE-F-VNPKDHDKPIQQVLVDLT-D 254 (371)
Q Consensus 184 ~~~g~~VlI~Ga--g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~~-v-i~~~~~~~~~~~~~~~~~-~ 254 (371)
+++|++||=+++ |+.++ .+|+ .|+..|++++.+++..+.+++ .|... + +.. .+..+.+..+. .
T Consensus 143 ~~~g~~VLDl~~g~G~~si---~~a~-~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~----~d~~~~~~~~~~~ 214 (324)
T d2as0a2 143 VQPGDRVLDVFTYTGGFAI---HAAI-AGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIV----GSAFEEMEKLQKK 214 (324)
T ss_dssp CCTTCEEEETTCTTTHHHH---HHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE----SCHHHHHHHHHHT
T ss_pred cCCCCeeecccCcccchhh---hhhh-cCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeee----chhhhhhHHHHhc
Confidence 578999988755 44444 4443 477799999999998877754 45421 1 111 22223333221 2
Q ss_pred C-CccEEEEccCC---------------HHHHHHHHHHhccCCceEEEEccC
Q 017431 255 G-GVDYSFECIGN---------------VSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 255 g-g~dvvid~~g~---------------~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+ .||+|+--... ..++..++++|++| |.++.+..+
T Consensus 215 ~~~fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pG-G~lv~~s~s 265 (324)
T d2as0a2 215 GEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDG-GILVTCSCS 265 (324)
T ss_dssp TCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEE-EEEEEEECC
T ss_pred cCCCCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCC-cEEEEEeCC
Confidence 3 89988842221 23577888899997 999987553
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.60 E-value=0.13 Score=38.75 Aligned_cols=33 Identities=18% Similarity=0.245 Sum_probs=29.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI 219 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~ 219 (371)
.|++|||+|+|.+|..-+..+...|+ +|++++.
T Consensus 12 ~gkrvLViGgG~va~~ka~~Ll~~GA-~VtVvap 44 (150)
T d1kyqa1 12 KDKRILLIGGGEVGLTRLYKLMPTGC-KLTLVSP 44 (150)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTC-EEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 67999999999999999999999999 8888843
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=94.50 E-value=0.11 Score=36.05 Aligned_cols=71 Identities=18% Similarity=0.249 Sum_probs=49.3
Q ss_pred CCCCCEEEEEcCChHHHHH-HHHHHHcCCCeEEEEcCCh-hhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEE
Q 017431 184 VEPGSIVAVFGLGTVGLAV-AEGAKAAGASRVIGIDIDP-KKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSF 261 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~a-i~la~~~g~~~v~~v~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvi 261 (371)
+...++|.++|.|++|+.+ +++++..|+ .|.+.|... ...+.+.+.|+.....+.. ... .++|+++
T Consensus 5 ~~~~~~ihfiGigG~GMs~LA~~L~~~G~-~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~--~~i---------~~~d~vV 72 (96)
T d1p3da1 5 MRRVQQIHFIGIGGAGMSGIAEILLNEGY-QISGSDIADGVVTQRLAQAGAKIYIGHAE--EHI---------EGASVVV 72 (96)
T ss_dssp CTTCCEEEEETTTSTTHHHHHHHHHHHTC-EEEEEESCCSHHHHHHHHTTCEEEESCCG--GGG---------TTCSEEE
T ss_pred chhCCEEEEEEECHHHHHHHHHHHHhCCC-EEEEEeCCCChhhhHHHHCCCeEEECCcc--ccC---------CCCCEEE
Confidence 4566899999998899887 799999999 999998764 3445666788854443322 111 2578777
Q ss_pred EccCC
Q 017431 262 ECIGN 266 (371)
Q Consensus 262 d~~g~ 266 (371)
-+.+-
T Consensus 73 ~S~AI 77 (96)
T d1p3da1 73 VSSAI 77 (96)
T ss_dssp ECTTS
T ss_pred ECCCc
Confidence 65543
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=94.46 E-value=0.19 Score=38.41 Aligned_cols=73 Identities=18% Similarity=0.247 Sum_probs=50.4
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCH
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 267 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~ 267 (371)
.+|-++|.|.+|...+.-+...|+ .|.+.++++++.+.+.+.+.... ....+.+ ...|+++-|+...
T Consensus 2 ~kIg~IGlG~MG~~iA~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~-------~~~~e~~-----~~~diii~~v~~~ 68 (162)
T d3cuma2 2 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAAGASAA-------RSARDAV-----QGADVVISMLPAS 68 (162)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEEC-------SSHHHHH-----TSCSEEEECCSCH
T ss_pred CEEEEEEEHHHHHHHHHHHHHCCC-eEEEEECchhhhhhhhhhhcccc-------chhhhhc-----cccCeeeecccch
Confidence 368899999999987776677899 89999999999888888776321 1111111 1367777777765
Q ss_pred HHHHHH
Q 017431 268 SVMRAA 273 (371)
Q Consensus 268 ~~~~~~ 273 (371)
...+..
T Consensus 69 ~~~~~v 74 (162)
T d3cuma2 69 QHVEGL 74 (162)
T ss_dssp HHHHHH
T ss_pred hhHHHH
Confidence 544433
|
| >d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: COMT-like domain: Caffeoyl-CoA O-methyltransferase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=94.39 E-value=0.12 Score=41.97 Aligned_cols=102 Identities=17% Similarity=0.307 Sum_probs=66.4
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----cCCcEEecCCCCCchHHHHHHhh-----
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDL----- 252 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~v~~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~----- 252 (371)
+....++||-+|++ +|..++.+|+++. -.+++.++.+++..+.+++ .|...-+.... .+..+.+.++
T Consensus 56 ~~~~~k~iLEiGT~-~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~--g~a~~~L~~l~~~~~ 132 (227)
T d1susa1 56 KLINAKNTMEIGVY-TGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFRE--GPALPVLDEMIKDEK 132 (227)
T ss_dssp HHHTCCEEEEECCG-GGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEE--SCHHHHHHHHHHCGG
T ss_pred HhcCCCcEEEecch-hhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeee--hHHHHHHHHHHhccc
Confidence 34456899999885 6888889998875 2399999999987766654 45533111111 2233334333
Q ss_pred cCCCccEEE-EccCC--HHHHHHHHHHhccCCceEEEEc
Q 017431 253 TDGGVDYSF-ECIGN--VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 253 ~~gg~dvvi-d~~g~--~~~~~~~~~~l~~~~G~iv~~g 288 (371)
..+.||+|| |+--. ...++.+++.|++| |.++.=.
T Consensus 133 ~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~g-Giii~DN 170 (227)
T d1susa1 133 NHGSYDFIFVDADKDNYLNYHKRLIDLVKVG-GVIGYDN 170 (227)
T ss_dssp GTTCBSEEEECSCSTTHHHHHHHHHHHBCTT-CCEEEET
T ss_pred cCCceeEEEeccchhhhHHHHHHHHhhcCCC-cEEEEcc
Confidence 234799888 43332 34589999999996 8877543
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=94.38 E-value=0.037 Score=48.16 Aligned_cols=48 Identities=29% Similarity=0.347 Sum_probs=38.9
Q ss_pred hcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 017431 180 NTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 228 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~ 228 (371)
+..-+.+|++|||+|+ |-+|...+..+...|+ +|+++.++.++.+.++
T Consensus 4 ~~~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~-~V~~~vR~~~~~~~~~ 52 (342)
T d1y1pa1 4 DNAVLPEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQ 52 (342)
T ss_dssp TTCSSCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHH
T ss_pred CCCCCCCcCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCchhHHHHH
Confidence 3445678999999988 8899999888888899 8999888877665543
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=94.34 E-value=0.014 Score=51.10 Aligned_cols=75 Identities=19% Similarity=0.175 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhc----CCcEE-ecCCCCCchHHHHHHhhcCC-Cc
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNF----GVTEF-VNPKDHDKPIQQVLVDLTDG-GV 257 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~-~~~~~----g~~~v-i~~~~~~~~~~~~~~~~~~g-g~ 257 (371)
++++|||+|+ |-+|...++.+...|+ .|+++++.+.+.. +.+.. +...+ .|-.+ .. .+.+...+ .+
T Consensus 7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d--~~---~l~~~~~~~~~ 80 (356)
T d1rkxa_ 7 QGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPTVPSLFETARVADGMQSEIGDIRD--QN---KLLESIREFQP 80 (356)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTC--HH---HHHHHHHHHCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCCccHHHHhhhhcccCCeEEEeeccC--hH---hhhhhhhhchh
Confidence 4699999988 9999999999999999 8999988765322 22221 12111 12222 22 23333334 78
Q ss_pred cEEEEccCC
Q 017431 258 DYSFECIGN 266 (371)
Q Consensus 258 dvvid~~g~ 266 (371)
|+++.+++.
T Consensus 81 ~~v~~~aa~ 89 (356)
T d1rkxa_ 81 EIVFHMAAQ 89 (356)
T ss_dssp SEEEECCSC
T ss_pred hhhhhhhcc
Confidence 999998775
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=94.33 E-value=0.13 Score=35.02 Aligned_cols=67 Identities=18% Similarity=0.288 Sum_probs=47.1
Q ss_pred CEEEEEcCChHHHHH-HHHHHHcCCCeEEEEcCCh-hhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 188 SIVAVFGLGTVGLAV-AEGAKAAGASRVIGIDIDP-KKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 188 ~~VlI~Gag~vG~~a-i~la~~~g~~~v~~v~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
-+|-++|.|++|+.+ +++++..|+ .|.+.|..+ +..+.++++|+.....+.. .++ .++|+++-+..
T Consensus 2 ~~ihfiGIgG~GMs~LA~~L~~~G~-~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~--~~i---------~~~d~vV~SsA 69 (89)
T d1j6ua1 2 MKIHFVGIGGIGMSAVALHEFSNGN-DVYGSNIEETERTAYLRKLGIPIFVPHSA--DNW---------YDPDLVIKTPA 69 (89)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTCCEESSCCT--TSC---------CCCSEEEECTT
T ss_pred cEEEEEeECHHHHHHHHHHHHhCCC-eEEEEeCCCChhHHHHHHCCCeEEeeecc--ccc---------CCCCEEEEecC
Confidence 367778998899865 688999999 999999876 3456788999865433222 111 25888886555
Q ss_pred C
Q 017431 266 N 266 (371)
Q Consensus 266 ~ 266 (371)
-
T Consensus 70 I 70 (89)
T d1j6ua1 70 V 70 (89)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=94.33 E-value=0.027 Score=44.29 Aligned_cols=39 Identities=33% Similarity=0.370 Sum_probs=34.3
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
....+++|+|+|+|+.|+.|+..+...|. +|+.++..++
T Consensus 39 ~~~~~k~V~IIGaGPAGL~AA~~la~~G~-~Vtl~E~~~~ 77 (179)
T d1ps9a3 39 PAVQKKNLAVVGAGPAGLAFAINAAARGH-QVTLFDAHSE 77 (179)
T ss_dssp SCSSCCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSSS
T ss_pred CCCCCcEEEEECccHHHHHHHHHHHhhcc-ceEEEeccCc
Confidence 34557899999999999999999999999 9999987654
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=94.25 E-value=0.17 Score=38.16 Aligned_cols=97 Identities=22% Similarity=0.298 Sum_probs=63.4
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHc--CCCeEEEEcCChhh---HHHHHhcCCcEEecCCCCCchHH---------------
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAA--GASRVIGIDIDPKK---FDRAKNFGVTEFVNPKDHDKPIQ--------------- 246 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~--g~~~v~~v~~~~~~---~~~~~~~g~~~vi~~~~~~~~~~--------------- 246 (371)
++|.|+|+ |.+|..+.++.+.. .. +|++......- .+.+++|.+..++..++ ....
T Consensus 3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~--~~~~~l~~~~~~~~~~v~~ 79 (150)
T d1r0ka2 3 RTVTVLGATGSIGHSTLDLIERNLDRY-QVIALTANRNVKDLADAAKRTNAKRAVIADP--SLYNDLKEALAGSSVEAAA 79 (150)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTGGGE-EEEEEEESSCHHHHHHHHHHTTCSEEEESCG--GGHHHHHHHTTTCSSEEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHcCCCCc-EEEEEEeCCCHHHHHHHHHhhccccceeccH--HHHHHHHHHhhhccccccc
Confidence 78999999 99999999999886 36 77776555442 34556788877654433 1111
Q ss_pred --HHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEcc
Q 017431 247 --QVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 247 --~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
+.+.+.....+|+++.+..+-..+.-.+.++..+ .-+.+..
T Consensus 80 g~~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~g--k~iaLAN 122 (150)
T d1r0ka2 80 GADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKG--KTVALAN 122 (150)
T ss_dssp SHHHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTT--SEEEECC
T ss_pred CccchheecccccceeeeecCchhHHHHHHHHHhcC--CEEEEec
Confidence 1122222225788888877766688888888873 4455544
|
| >d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 1, PRMT1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=94.24 E-value=0.051 Score=46.82 Aligned_cols=96 Identities=24% Similarity=0.270 Sum_probs=55.8
Q ss_pred hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhH---HHHHhcCCc---EEecCCCCCchHHHHHHhhc
Q 017431 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF---DRAKNFGVT---EFVNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~---~~~~~~g~~---~vi~~~~~~~~~~~~~~~~~ 253 (371)
+...+.+|++||-+|+|. |.+++.+|+ .|+++|++++.++.-. +.+++.+.. .++.... .++ ...
T Consensus 27 ~~~~~~~~~~VLDiGcG~-G~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~--~~~-----~~~ 97 (316)
T d1oria_ 27 HNRHLFKDKVVLDVGSGT-GILCMFAAK-AGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKV--EEV-----ELP 97 (316)
T ss_dssp TCHHHHTTCEEEEETCTT-SHHHHHHHH-TTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCT--TTC-----CCS
T ss_pred hccccCCcCEEEEEecCC-cHHHHHHHH-hCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccH--HHc-----ccc
Confidence 333456899999999874 677766666 6887999999876422 222333332 1222211 110 111
Q ss_pred CCCccEEEEc-cCC--------HHHHHHHHHHhccCCceEE
Q 017431 254 DGGVDYSFEC-IGN--------VSVMRAALECCHKGWGTSV 285 (371)
Q Consensus 254 ~gg~dvvid~-~g~--------~~~~~~~~~~l~~~~G~iv 285 (371)
...+|+|+.. .+. +..+...-+.|+++ |+++
T Consensus 98 ~~~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~-G~ii 137 (316)
T d1oria_ 98 VEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPD-GLIF 137 (316)
T ss_dssp SSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEE-EEEE
T ss_pred cceeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCC-eEEE
Confidence 1279998752 221 23455666789996 8876
|
| >d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Met-10+ protein-like domain: Hypothetical protein PH0793 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=94.21 E-value=0.056 Score=45.18 Aligned_cols=94 Identities=20% Similarity=0.203 Sum_probs=59.4
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCc---EEecCCCCCchHHHHHHhhcCC
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT---EFVNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~---~vi~~~~~~~~~~~~~~~~~~g 255 (371)
.+++|++||-.||| +|..++.+|+. |+.+|++++.+++..+++++ .+.. .++..+. .+....
T Consensus 104 ~~~~g~~VlD~~aG-~G~~~l~~a~~-~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~---------~~~~~~ 172 (260)
T d2frna1 104 VAKPDELVVDMFAG-IGHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDN---------RDFPGE 172 (260)
T ss_dssp HCCTTCEEEETTCT-TTTTHHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCT---------TTCCCC
T ss_pred hcCCccEEEECcce-EcHHHHHHHHh-CCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcch---------HHhccC
Confidence 35789999998664 34445566665 43499999999998877753 3432 2332221 122233
Q ss_pred -CccEEE-Ecc-CCHHHHHHHHHHhccCCceEEEEc
Q 017431 256 -GVDYSF-ECI-GNVSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 256 -g~dvvi-d~~-g~~~~~~~~~~~l~~~~G~iv~~g 288 (371)
.+|.|+ +.. .+...+..+++.+++| |.+....
T Consensus 173 ~~~D~Ii~~~p~~~~~~l~~a~~~l~~g-G~lh~~~ 207 (260)
T d2frna1 173 NIADRILMGYVVRTHEFIPKALSIAKDG-AIIHYHN 207 (260)
T ss_dssp SCEEEEEECCCSSGGGGHHHHHHHEEEE-EEEEEEE
T ss_pred CCCCEEEECCCCchHHHHHHHHhhcCCC-CEEEEEe
Confidence 689555 432 3345688899999996 8876543
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=94.05 E-value=0.054 Score=39.29 Aligned_cols=43 Identities=23% Similarity=0.213 Sum_probs=36.1
Q ss_pred hhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 179 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
.+.....++++|+|+|+|.+|+-.+..++..|. +|..+.+.+.
T Consensus 14 ~~~l~~~~~~~vvVvGgG~ig~E~A~~l~~~g~-~vt~i~~~~~ 56 (121)
T d1mo9a2 14 VEELDYEPGSTVVVVGGSKTAVEYGCFFNATGR-RTVMLVRTEP 56 (121)
T ss_dssp HHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCT
T ss_pred HHHHhhCCCCEEEEECCCHHHHHHHHHHHhcch-hheEeeccch
Confidence 345566788999999999999999999999998 8988877643
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=94.03 E-value=0.13 Score=38.87 Aligned_cols=86 Identities=14% Similarity=0.181 Sum_probs=61.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCH
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 267 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~ 267 (371)
+|.++|+|.+|.+.+.-....|. ++++.+++.++.+.+ +++|.... .+..+.+. ..|+||=|+..
T Consensus 2 kIg~IG~G~mG~al~~~l~~~~~-~i~v~~r~~~~~~~l~~~~g~~~~-------~~~~~~~~-----~~dvIilavkp- 67 (152)
T d2ahra2 2 KIGIIGVGKMASAIIKGLKQTPH-ELIISGSSLERSKEIAEQLALPYA-------MSHQDLID-----QVDLVILGIKP- 67 (152)
T ss_dssp EEEEECCSHHHHHHHHHHTTSSC-EEEEECSSHHHHHHHHHHHTCCBC-------SSHHHHHH-----TCSEEEECSCG-
T ss_pred EEEEEeccHHHHHHHHHHHhCCC-eEEEEcChHHhHHhhccccceeee-------chhhhhhh-----ccceeeeecch-
Confidence 57889999999987776666677 899999988876654 56776421 12222322 48999988864
Q ss_pred HHHHHHHHHhccCCceEEEEcc
Q 017431 268 SVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 268 ~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
..++..++.+.++ ..++.+..
T Consensus 68 ~~~~~vl~~l~~~-~~iis~~a 88 (152)
T d2ahra2 68 QLFETVLKPLHFK-QPIISMAA 88 (152)
T ss_dssp GGHHHHHTTSCCC-SCEEECCT
T ss_pred HhHHHHhhhcccc-eeEecccc
Confidence 5688888888885 77776643
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=93.99 E-value=0.11 Score=44.42 Aligned_cols=75 Identities=23% Similarity=0.234 Sum_probs=46.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC--hh---hHHHHHhcCCcEEecCCCCCchHHHHHHhhcCC-CccEE
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID--PK---KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYS 260 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~--~~---~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~g-g~dvv 260 (371)
.+|||+|+ |-+|...+..+...|+ +|+++++- .. +.+.+...+--+++..+-.+. +.+.+...+ ++|+|
T Consensus 1 ~KILVTGatGfIGs~lv~~Ll~~g~-~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~---~~l~~~~~~~~~d~V 76 (338)
T d1orra_ 1 AKLLITGGCGFLGSNLASFALSQGI-DLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNK---NDVTRLITKYMPDSC 76 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCH---HHHHHHHHHHCCSEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCCcccchhHHHHhhccCCcEEEEcccCCH---HHHHHHHHhcCCceE
Confidence 37999988 9999999999988899 89888632 22 223333333333332211112 233333334 78999
Q ss_pred EEccCC
Q 017431 261 FECIGN 266 (371)
Q Consensus 261 id~~g~ 266 (371)
|+++..
T Consensus 77 ih~aa~ 82 (338)
T d1orra_ 77 FHLAGQ 82 (338)
T ss_dssp EECCCC
T ss_pred Eeeccc
Confidence 998764
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=93.82 E-value=0.028 Score=47.42 Aligned_cols=34 Identities=35% Similarity=0.400 Sum_probs=30.5
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
+++|+|+|+|..|++|+..+...|. +|++++.++
T Consensus 1 ~KkV~IIGaG~aGL~aA~~La~~G~-~V~vlE~~~ 34 (373)
T d1seza1 1 AKRVAVIGAGVSGLAAAYKLKIHGL-NVTVFEAEG 34 (373)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSC-EEEEECSSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence 5889999999999999999999999 899998654
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=93.77 E-value=0.29 Score=36.87 Aligned_cols=97 Identities=14% Similarity=0.250 Sum_probs=64.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcC--CCeEEEEcCChhh---HHHHHhcCCcEEecCCCCCchH---H------------
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAG--ASRVIGIDIDPKK---FDRAKNFGVTEFVNPKDHDKPI---Q------------ 246 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g--~~~v~~v~~~~~~---~~~~~~~g~~~vi~~~~~~~~~---~------------ 246 (371)
++|.|+|+ |.+|..+..+.+..- . +|++......- .+.+++|.+..++..++ ..+ .
T Consensus 2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~--~~~~~l~~~l~~~~~~~~~ 78 (151)
T d1q0qa2 2 KQLTILGSTGSIGCSTLDVVRHNPEHF-RVVALVAGKNVTRMVEQCLEFSPRYAVMDDE--ASAKLLKTMLQQQGSRTEV 78 (151)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTTE-EEEEEEESSCHHHHHHHHHHHCCSEEEESSH--HHHHHHHHHHHHTTCCCEE
T ss_pred CeEEEEcCCcHHHHHHHHHHHhCCCCc-EEEEEEecCcHHHHHHHHHHHhhcccccccH--HHHHHHHHHhhhhcccccc
Confidence 37899998 999999999999873 5 67666554432 23456788877655433 111 1
Q ss_pred ----HHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEcc
Q 017431 247 ----QVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 247 ----~~~~~~~~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
+.+.++... .+|+++.+..+-..+.-.+..+.. |.-+.+..
T Consensus 79 ~~g~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~--gk~iaLAN 124 (151)
T d1q0qa2 79 LSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRA--GKTILLAN 124 (151)
T ss_dssp EESHHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHT--TCEEEECC
T ss_pred ccChHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhc--CCeEEEEc
Confidence 122232233 689999888887778888888888 45555544
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=93.72 E-value=0.044 Score=39.34 Aligned_cols=34 Identities=29% Similarity=0.431 Sum_probs=30.9
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
.+|.|+|+|.+|.+.++-|+.+|+ ++++.+.+++
T Consensus 12 ~kigIlGgGQL~rMla~aA~~lG~-~v~v~d~~~~ 45 (111)
T d1kjqa2 12 TRVMLLGSGELGKEVAIECQRLGV-EVIAVDRYAD 45 (111)
T ss_dssp CEEEEESCSHHHHHHHHHHHTTTC-EEEEEESSTT
T ss_pred CEEEEEeCCHHHHHHHHHHHHCCC-EEEEEcCCCC
Confidence 569999999999999999999999 8898887765
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=93.69 E-value=0.93 Score=33.65 Aligned_cols=94 Identities=12% Similarity=0.025 Sum_probs=59.4
Q ss_pred CEEEEEc-CChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCC-Cc-cEEEEcc
Q 017431 188 SIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GV-DYSFECI 264 (371)
Q Consensus 188 ~~VlI~G-ag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~g-g~-dvvid~~ 264 (371)
++|.|+| .|.+|......++..|+ .|.+.+++++........+++.++.... .......+.+..+. .. .+++|++
T Consensus 10 ~kI~iIGg~G~mG~~la~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~v~~~~~-~~~~~~v~~~~~~~~~~~~iiiD~~ 87 (152)
T d2pv7a2 10 HKIVIVGGYGKLGGLFARYLRASGY-PISILDREDWAVAESILANADVVIVSVP-INLTLETIERLKPYLTENMLLADLT 87 (152)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTTCGGGHHHHHTTCSEEEECSC-GGGHHHHHHHHGGGCCTTSEEEECC
T ss_pred CeEEEEcCCCHHHHHHHHHHHHcCC-CcEecccccccccchhhhhccccccccc-hhhheeeeecccccccCCceEEEec
Confidence 5899999 69999999999999999 8999999887666555566666654433 13333344443332 22 3777877
Q ss_pred CCHHHHHHHHHHhccCCceEE
Q 017431 265 GNVSVMRAALECCHKGWGTSV 285 (371)
Q Consensus 265 g~~~~~~~~~~~l~~~~G~iv 285 (371)
+........+....+ .+++
T Consensus 88 Svk~~~~~~~~~~~~--~~~v 106 (152)
T d2pv7a2 88 SVKREPLAKMLEVHT--GAVL 106 (152)
T ss_dssp SCCHHHHHHHHHHCS--SEEE
T ss_pred ccCHHHHHHHHHHcc--CCEE
Confidence 653333333333333 4554
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=93.63 E-value=0.14 Score=42.44 Aligned_cols=34 Identities=18% Similarity=0.174 Sum_probs=29.1
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 017431 189 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK 223 (371)
Q Consensus 189 ~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~ 223 (371)
+.||+|+ +++|.+.+..+...|+ +|+.++++.++
T Consensus 3 vAlVTGas~GIG~aia~~la~~G~-~Vvi~~r~~~~ 37 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEG 37 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchH
Confidence 4688888 8999999999999999 89999887554
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=93.60 E-value=0.042 Score=45.45 Aligned_cols=35 Identities=29% Similarity=0.273 Sum_probs=30.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
..++|+|+|+|+.|+++...+...|. +|+++++++
T Consensus 3 ~~~kV~IiGaG~aGl~~A~~L~~~G~-~v~v~Er~~ 37 (265)
T d2voua1 3 TTDRIAVVGGSISGLTAALMLRDAGV-DVDVYERSP 37 (265)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence 35789999999999999999989999 999998754
|
| >d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thermus thermophilus [TaxId: 274]
Probab=93.59 E-value=0.11 Score=44.46 Aligned_cols=95 Identities=21% Similarity=0.229 Sum_probs=63.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcC------C-----cEEecCCCCCchHHHHHHhhcC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG------V-----TEFVNPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g------~-----~~vi~~~~~~~~~~~~~~~~~~ 254 (371)
..++|||+|.|. |..+-.+++.....+|.+++.+++-.+.++++- + .+++ . .+..+.+++ ++
T Consensus 77 ~pk~VLiiG~G~-G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~-~----~Da~~~l~~-~~ 149 (312)
T d1uira_ 77 EPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLV-I----DDARAYLER-TE 149 (312)
T ss_dssp CCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEE-E----SCHHHHHHH-CC
T ss_pred CcceEEEeCCCc-hHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEE-E----chHHHHhhh-cC
Confidence 457999998853 555666777766669999999999888777532 1 0122 1 234444444 34
Q ss_pred CCccEEE-Ecc---C---------CHHHHHHHHHHhccCCceEEEEc
Q 017431 255 GGVDYSF-ECI---G---------NVSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 255 gg~dvvi-d~~---g---------~~~~~~~~~~~l~~~~G~iv~~g 288 (371)
+.+|+|+ |.. + +.+.++.+.+.|+++ |.++.-.
T Consensus 150 ~~yDvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~-Gvlv~~~ 195 (312)
T d1uira_ 150 ERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPG-GVMGMQT 195 (312)
T ss_dssp CCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEE-EEEEEEE
T ss_pred CcccEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCC-ceEEEec
Confidence 4899887 442 2 135678999999997 9988653
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.54 E-value=0.068 Score=42.41 Aligned_cols=39 Identities=28% Similarity=0.405 Sum_probs=34.3
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 227 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~ 227 (371)
++|.|+|+|.+|...++++...|+ .|+..+.+++..+.+
T Consensus 5 kkvaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~a 43 (192)
T d1f0ya2 5 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQTEDILAKS 43 (192)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHH
T ss_pred EEEEEECcCHHHHHHHHHHHhCCC-cEEEEECChHHHHHH
Confidence 589999999999998899999999 999999999765544
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=93.51 E-value=0.05 Score=43.11 Aligned_cols=83 Identities=14% Similarity=0.155 Sum_probs=54.2
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE-----EecCCC--CCchHHHHHHhhcCCCccEE
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-----FVNPKD--HDKPIQQVLVDLTDGGVDYS 260 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~-----vi~~~~--~~~~~~~~~~~~~~gg~dvv 260 (371)
.+|.|+|+|..|.+...++-..|. +|....++++..+.+.+-+... +-.+.. ...++.+.+. +.|++
T Consensus 8 ~KI~ViGaG~wGtAlA~~La~~g~-~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~~-----~ad~i 81 (189)
T d1n1ea2 8 NKAVVFGSGAFGTALAMVLSKKCR-EVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYN-----GAEII 81 (189)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTEE-EEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHT-----TCSCE
T ss_pred ceEEEECCCHHHHHHHHHHHHcCC-eEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhccC-----CCCEE
Confidence 469999999999998888877787 8999999988877665432110 000000 0122333332 48999
Q ss_pred EEccCCHHHHHHHHHHh
Q 017431 261 FECIGNVSVMRAALECC 277 (371)
Q Consensus 261 id~~g~~~~~~~~~~~l 277 (371)
+-++.+ ..++..++.+
T Consensus 82 iiavPs-~~~~~~~~~~ 97 (189)
T d1n1ea2 82 LFVIPT-QFLRGFFEKS 97 (189)
T ss_dssp EECSCH-HHHHHHHHHH
T ss_pred EEcCcH-HHHHHHHHHH
Confidence 999988 4466666554
|
| >d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.48 E-value=0.12 Score=43.68 Aligned_cols=96 Identities=16% Similarity=0.139 Sum_probs=62.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC---------c-EEecCCCCCchHHHHHHhhcCC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV---------T-EFVNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~---------~-~vi~~~~~~~~~~~~~~~~~~g 255 (371)
..++|||+|.|. |..+-.+++..+..+|++++.+++-.+.++++-. . +++ . .+..+.+++ +.+
T Consensus 78 ~pk~vLiiGgG~-G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~-~----~Da~~~l~~-~~~ 150 (285)
T d2o07a1 78 NPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLH-V----GDGFEFMKQ-NQD 150 (285)
T ss_dssp SCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE-E----SCHHHHHHT-CSS
T ss_pred CcCeEEEeCCCc-hHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEE-E----ccHHHHHhc-CCC
Confidence 458999997753 4455567777777799999999998888876431 1 122 1 223334433 334
Q ss_pred CccEEE-EccCC---------HHHHHHHHHHhccCCceEEEEcc
Q 017431 256 GVDYSF-ECIGN---------VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 256 g~dvvi-d~~g~---------~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
.+|+|+ |.... .+.++.+.+.|+++ |.++.-..
T Consensus 151 ~yDvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~-Gi~v~q~~ 193 (285)
T d2o07a1 151 AFDVIITDSSDPMGPAESLFKESYYQLMKTALKED-GVLCCQGE 193 (285)
T ss_dssp CEEEEEEECC-----------CHHHHHHHHHEEEE-EEEEEEEE
T ss_pred CCCEEEEcCCCCCCcccccccHHHHHHHHHhcCCC-CeEEEecc
Confidence 899888 43321 24588889999997 99887643
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=93.39 E-value=0.065 Score=38.63 Aligned_cols=35 Identities=17% Similarity=0.272 Sum_probs=31.3
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
.++|+|+|+|.+|+-+++.+..+|. +|+.+.+.+.
T Consensus 22 p~~v~IiGgG~ig~E~A~~l~~~G~-~Vtlve~~~~ 56 (117)
T d1ebda2 22 PKSLVVIGGGYIGIELGTAYANFGT-KVTILEGAGE 56 (117)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred CCeEEEECCCccceeeeeeeccccc-EEEEEEecce
Confidence 4789999999999999999999999 8999976654
|
| >d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein MJ0882 domain: Hypothetical protein MJ0882 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=93.36 E-value=0.023 Score=45.28 Aligned_cols=99 Identities=15% Similarity=0.139 Sum_probs=60.8
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCc--E-EecCCCCCchHHHHHH
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT--E-FVNPKDHDKPIQQVLV 250 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~--~-vi~~~~~~~~~~~~~~ 250 (371)
|.......++++||=+|+| .|..++.+++ .+. +|++++.++...+.+++ .+.. . .+...+ + ..
T Consensus 44 Li~~l~~~~~~~VLDiGcG-~G~~~~~la~-~~~-~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d----~---~~ 113 (194)
T d1dusa_ 44 LVENVVVDKDDDILDLGCG-YGVIGIALAD-EVK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSD----L---YE 113 (194)
T ss_dssp HHHHCCCCTTCEEEEETCT-TSHHHHHHGG-GSS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECS----T---TT
T ss_pred HHHhCCcCCCCeEEEEeec-CChhHHHHHh-hcc-ccceeeeccccchhHHHHHHHhCCccceEEEEEcc----h---hh
Confidence 3455677889999998775 3455555665 455 89999999987777753 2321 1 111111 1 11
Q ss_pred hhcCCCccEEEEccC---C----HHHHHHHHHHhccCCceEEEE
Q 017431 251 DLTDGGVDYSFECIG---N----VSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 251 ~~~~gg~dvvid~~g---~----~~~~~~~~~~l~~~~G~iv~~ 287 (371)
...++.||+|+.... . ...++.+.+.|+++ |+++.+
T Consensus 114 ~~~~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~ 156 (194)
T d1dusa_ 114 NVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDN-GEIWVV 156 (194)
T ss_dssp TCTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred hhccCCceEEEEcccEEecchhhhhHHHHHHHhcCcC-cEEEEE
Confidence 122337999996322 2 23477888899997 987654
|
| >d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Bacillus subtilis [TaxId: 1423]
Probab=93.32 E-value=0.17 Score=42.45 Aligned_cols=96 Identities=17% Similarity=0.131 Sum_probs=64.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcC-----C-----cEEecCCCCCchHHHHHHhhcCC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG-----V-----TEFVNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g-----~-----~~vi~~~~~~~~~~~~~~~~~~g 255 (371)
..++|||+|.|. |..+-.++++.+.++|.+++.+++-.+.++++- + ..++. .+....+++ ++.
T Consensus 75 ~p~~vLiiGgG~-G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~-----~D~~~~l~~-~~~ 147 (274)
T d1iy9a_ 75 NPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQV-----DDGFMHIAK-SEN 147 (274)
T ss_dssp SCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEE-----SCSHHHHHT-CCS
T ss_pred CcceEEecCCCC-cHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEe-----chHHHHHhh-cCC
Confidence 457999997753 455556677777779999999999888887642 1 01221 122333443 334
Q ss_pred CccEEE-EccC---------CHHHHHHHHHHhccCCceEEEEcc
Q 017431 256 GVDYSF-ECIG---------NVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 256 g~dvvi-d~~g---------~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
.+|+|+ |... +.+..+.+.+.|+++ |.++.-..
T Consensus 148 ~yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~-Gv~v~q~~ 190 (274)
T d1iy9a_ 148 QYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKED-GIFVAQTD 190 (274)
T ss_dssp CEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEE-EEEEEECC
T ss_pred CCCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCC-ceEEEecC
Confidence 899887 4322 246689999999997 99987643
|
| >d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein HI0319 (YecO) domain: Hypothetical protein HI0319 (YecO) species: Haemophilus influenzae [TaxId: 727]
Probab=93.20 E-value=0.23 Score=39.97 Aligned_cols=94 Identities=16% Similarity=0.222 Sum_probs=60.9
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHH---cCCCeEEEEcCChhhHHHHHh----cCCcE---EecCCCCCchHHHHHHhhc
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKA---AGASRVIGIDIDPKKFDRAKN----FGVTE---FVNPKDHDKPIQQVLVDLT 253 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~---~g~~~v~~v~~~~~~~~~~~~----~g~~~---vi~~~~~~~~~~~~~~~~~ 253 (371)
++++.+||=+|+| .|..+..+++. .++ +|++++.+++-.+.+++ .+... ... .+ .....
T Consensus 37 ~~~~~~vLDlGCG-tG~~~~~l~~~~~~~~~-~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~-~d--------~~~~~ 105 (225)
T d1im8a_ 37 VTADSNVYDLGCS-RGAATLSARRNINQPNV-KIIGIDNSQPMVERCRQHIAAYHSEIPVEILC-ND--------IRHVE 105 (225)
T ss_dssp CCTTCEEEEESCT-TCHHHHHHHHTCCCSSC-EEEEECSCHHHHHHHHHHHHTSCCSSCEEEEC-SC--------TTTCC
T ss_pred cCCCCEEEEeccc-hhhHHHHHHHhhcCCCC-ceEEeCCCHHHHHHHHHHhHhhcccchhhhcc-ch--------hhccc
Confidence 6788999999885 45556666664 467 99999999987777764 23221 121 11 11222
Q ss_pred CCCccEEEEccCC--------HHHHHHHHHHhccCCceEEEEcc
Q 017431 254 DGGVDYSFECIGN--------VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 254 ~gg~dvvid~~g~--------~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
...+|+++.+..- ..+++.+.+.|+++ |.++....
T Consensus 106 ~~~~d~i~~~~~l~~~~~~d~~~~l~~i~~~Lkpg-G~li~~~~ 148 (225)
T d1im8a_ 106 IKNASMVILNFTLQFLPPEDRIALLTKIYEGLNPN-GVLVLSEK 148 (225)
T ss_dssp CCSEEEEEEESCGGGSCGGGHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred cccceeeEEeeeccccChhhHHHHHHHHHHhCCCC-ceeecccc
Confidence 2357776653221 24689999999997 99987643
|
| >d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Glycine N-methyltransferase domain: Glycine N-methyltransferase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=93.16 E-value=0.024 Score=48.30 Aligned_cols=97 Identities=16% Similarity=0.126 Sum_probs=61.1
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc----CCcE-----EecCCCCCchHHHHHHhh
Q 017431 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTE-----FVNPKDHDKPIQQVLVDL 252 (371)
Q Consensus 182 ~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~----g~~~-----vi~~~~~~~~~~~~~~~~ 252 (371)
.+.+++++||=+|+| .|..++.+++. |+ +|++++.+++-.+.+++. +... .+.. .++...-...
T Consensus 52 l~~~~~~~vLD~GcG-~G~~~~~la~~-g~-~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 124 (292)
T d1xvaa_ 52 LRQHGCHRVLDVACG-TGVDSIMLVEE-GF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEE----ANWLTLDKDV 124 (292)
T ss_dssp HHHTTCCEEEESSCT-TSHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEE----CCGGGHHHHS
T ss_pred hhhcCCCEEEEecCC-CcHHHHHHHHc-CC-eeeeccCchHHHHHHHHHHHhcccccccceeeeee----cccccccccc
Confidence 344567899888886 46677778775 88 899999999877766542 2110 1111 1111111223
Q ss_pred cCC-CccEEEEccCC--------------HHHHHHHHHHhccCCceEEE
Q 017431 253 TDG-GVDYSFECIGN--------------VSVMRAALECCHKGWGTSVI 286 (371)
Q Consensus 253 ~~g-g~dvvid~~g~--------------~~~~~~~~~~l~~~~G~iv~ 286 (371)
... .+|.|+..... ..+++.+.+.|++| |.++.
T Consensus 125 ~~~~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~li~ 172 (292)
T d1xvaa_ 125 PAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPG-GLLVI 172 (292)
T ss_dssp CCTTCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEE-EEEEE
T ss_pred CCCCCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcC-cEEEE
Confidence 333 79999864321 12689999999997 99875
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=93.10 E-value=0.093 Score=43.09 Aligned_cols=90 Identities=14% Similarity=0.179 Sum_probs=57.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCcEEecCCCCCchHHHHHHhhc-CCCccE
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT-DGGVDY 259 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~-~gg~dv 259 (371)
.++++||=+|+| .|..+..+++ .|. +|++++.+++-.+.+++ .+...-+...+ +.+.. ++.||+
T Consensus 36 ~~~~~vLDiGCG-~G~~~~~l~~-~g~-~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d--------~~~~~~~~~fD~ 104 (246)
T d1y8ca_ 36 LVFDDYLDLACG-TGNLTENLCP-KFK-NTWAVDLSQEMLSEAENKFRSQGLKPRLACQD--------ISNLNINRKFDL 104 (246)
T ss_dssp CCTTEEEEETCT-TSTTHHHHGG-GSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEECCC--------GGGCCCSCCEEE
T ss_pred CCCCeEEEEeCc-CCHHHHHHHH-hCC-ccEeeccchhhhhhccccccccCccceeeccc--------hhhhcccccccc
Confidence 345789988886 4666667766 477 89999999987766643 34322121222 12222 237999
Q ss_pred EEEccCC------H----HHHHHHHHHhccCCceEEE
Q 017431 260 SFECIGN------V----SVMRAALECCHKGWGTSVI 286 (371)
Q Consensus 260 vid~~g~------~----~~~~~~~~~l~~~~G~iv~ 286 (371)
|+...+. + .+++.+.+.|+++ |.++.
T Consensus 105 i~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~~i~ 140 (246)
T d1y8ca_ 105 ITCCLDSTNYIIDSDDLKKYFKAVSNHLKEG-GVFIF 140 (246)
T ss_dssp EEECTTGGGGCCSHHHHHHHHHHHHTTEEEE-EEEEE
T ss_pred cceeeeeeeccCCHHHHHHHHHHHHHhCCCC-eEEEE
Confidence 9964332 1 2577888889997 98874
|
| >d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thermotoga maritima [TaxId: 2336]
Probab=93.07 E-value=0.21 Score=42.21 Aligned_cols=96 Identities=15% Similarity=0.134 Sum_probs=62.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC---------c-EEecCCCCCchHHHHHHhhcCC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV---------T-EFVNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~---------~-~vi~~~~~~~~~~~~~~~~~~g 255 (371)
..++|||+|.|. |..+-.+++..+..+|++++.+++-.+.++++-. . +++ . .+..+.+++ +++
T Consensus 89 ~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~-~----~Da~~~l~~-~~~ 161 (295)
T d1inla_ 89 NPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIV-I----ANGAEYVRK-FKN 161 (295)
T ss_dssp SCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE-E----SCHHHHGGG-CSS
T ss_pred CCceEEEecCCc-hHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEE-h----hhHHHHHhc-CCC
Confidence 347999997753 3445567777776699999999998888876431 1 122 1 223333433 334
Q ss_pred CccEEE-EccC----------CHHHHHHHHHHhccCCceEEEEcc
Q 017431 256 GVDYSF-ECIG----------NVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 256 g~dvvi-d~~g----------~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
.+|+|+ |+.. +.+.++.+.+.|+++ |.++.-..
T Consensus 162 ~yDvIi~D~~dp~~~~~~~L~t~efy~~~~~~L~~~-Gi~v~q~~ 205 (295)
T d1inla_ 162 EFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKED-GVFSAETE 205 (295)
T ss_dssp CEEEEEEEC----------CCSHHHHHHHHHHEEEE-EEEEEECC
T ss_pred CCCEEEEcCCCCCcCchhhhccHHHHHHHHhhcCCC-cEEEEecC
Confidence 899888 4322 135688999999997 99987643
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=93.06 E-value=0.079 Score=45.58 Aligned_cols=32 Identities=25% Similarity=0.270 Sum_probs=29.0
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID 220 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~ 220 (371)
+++||+|+ |-+|...+..+...|+ .|+++++.
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g~-~V~~~~r~ 34 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRR 34 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred CEEEEeCCccHHHHHHHHHHHHCcC-EEEEEECC
Confidence 57999998 9999999999999999 89999874
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=93.03 E-value=0.063 Score=41.94 Aligned_cols=48 Identities=15% Similarity=0.103 Sum_probs=35.5
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 227 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~ 227 (371)
|.+...--+|++|||+|+|+++.+++..+. +.+++.++.|+.++.+.+
T Consensus 9 l~~~~~~~~~k~vlIlGaGG~arai~~aL~--~~~~i~I~nR~~~ka~~l 56 (177)
T d1nvta1 9 LEEEIGRVKDKNIVIYGAGGAARAVAFELA--KDNNIIIANRTVEKAEAL 56 (177)
T ss_dssp HHHHHCCCCSCEEEEECCSHHHHHHHHHHT--SSSEEEEECSSHHHHHHH
T ss_pred HHHhCCCcCCCEEEEECCcHHHHHHHHHHc--cccceeeehhhhhHHHHH
Confidence 334344458899999999999998776664 444899999998876543
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=93.03 E-value=0.16 Score=41.22 Aligned_cols=47 Identities=28% Similarity=0.398 Sum_probs=40.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCC
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGV 232 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~-~~g~ 232 (371)
-.|.+|+|.|.|.+|..+++++...|+ ++++++.+..+.+.+. ..|.
T Consensus 37 l~g~~v~IqG~GnVG~~~a~~L~~~Ga-kvv~~d~~~~~~~~~~~~~g~ 84 (230)
T d1leha1 37 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGA 84 (230)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEeecccHHHHHHHHHhcCC
Confidence 578999999999999999999999999 9999988887776554 4554
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=93.03 E-value=0.047 Score=48.39 Aligned_cols=32 Identities=34% Similarity=0.277 Sum_probs=28.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI 219 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~ 219 (371)
|.+|||+|+ |-+|...+..+...|+ .|++++.
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~-~V~~iDn 33 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNY-EVCIVDN 33 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEec
Confidence 689999988 9999999999999999 8999863
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=92.94 E-value=0.079 Score=38.57 Aligned_cols=33 Identities=21% Similarity=0.079 Sum_probs=29.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 220 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~ 220 (371)
.++++|+|+|.+|+-.+++++.+|. +|..+.++
T Consensus 20 P~~vvIIGgG~iG~E~A~~l~~lG~-~Vtii~~~ 52 (122)
T d1h6va2 20 PGKTLVVGASYVALECAGFLAGIGL-DVTVMVRS 52 (122)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred CCeEEEECCCccHHHHHHHHhhcCC-eEEEEEec
Confidence 3689999999999999999999999 78888653
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=92.91 E-value=0.078 Score=38.29 Aligned_cols=37 Identities=11% Similarity=0.179 Sum_probs=32.3
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
++..++|+|+|+|.+|+-.+..+..+|. +|+.+.+.+
T Consensus 19 l~~p~~v~IiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~ 55 (117)
T d1onfa2 19 IKESKKIGIVGSGYIAVELINVIKRLGI-DSYIFARGN 55 (117)
T ss_dssp CCCCSEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSS
T ss_pred cCCCCEEEEECCchHHHHHHHHHHhccc-cceeeehhc
Confidence 4456899999999999999999999999 899997764
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=92.84 E-value=0.018 Score=46.04 Aligned_cols=93 Identities=26% Similarity=0.390 Sum_probs=59.7
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcEE-ecCCCCCchHHHHHHhhc-CCCc
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF-VNPKDHDKPIQQVLVDLT-DGGV 257 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~v-i~~~~~~~~~~~~~~~~~-~gg~ 257 (371)
+++| +||=+|+| .|..+..+++ .|+ +|++++.+++..+.++ +.+.+.+ +...+ +.+.. .+.|
T Consensus 29 ~~~g-rvLDiGcG-~G~~~~~la~-~g~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d--------~~~~~~~~~f 96 (198)
T d2i6ga1 29 VAPG-RTLDLGCG-NGRNSLYLAA-NGY-DVTAWDKNPASMANLERIKAAEGLDNLQTDLVD--------LNTLTFDGEY 96 (198)
T ss_dssp SCSC-EEEEETCT-TSHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCTTEEEEECC--------TTTCCCCCCE
T ss_pred CCCC-cEEEECCC-CCHHHHHHHH-Hhh-hhccccCcHHHHHHHHHHhhhccccchhhhhee--------cccccccccc
Confidence 3444 89889987 6777777776 488 8999999998777654 3444321 11111 01111 2379
Q ss_pred cEEEEccC-----C---HHHHHHHHHHhccCCceEEEEcc
Q 017431 258 DYSFECIG-----N---VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 258 dvvid~~g-----~---~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
|+|+...- . ...++.+.++|+++ |.++....
T Consensus 97 D~I~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~~~~~~~ 135 (198)
T d2i6ga1 97 DFILSTVVMMFLEAQTIPGLIANMQRCTKPG-GYNLIVAA 135 (198)
T ss_dssp EEEEEESCGGGSCTTHHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred cEEEEeeeeecCCHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 99986321 1 24678888889997 99887644
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=92.83 E-value=0.045 Score=36.39 Aligned_cols=35 Identities=23% Similarity=0.422 Sum_probs=31.0
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK 223 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~ 223 (371)
++|.|+|+|-+|.+.++-++.+|. ++++.+.+++.
T Consensus 2 k~vgIlG~GQLgrMl~~Aa~~LG~-~v~vldp~~~~ 36 (78)
T d3etja2 2 KQVCVLGNGQLGRMLRQAGEPLGI-AVWPVGLDAEP 36 (78)
T ss_dssp EEEEEEBCSHHHHHHHHHHGGGTE-EEEEECTTSCG
T ss_pred CEEEEEcCCHHHHHHHHHHHHcCC-EEEEEcCCCCC
Confidence 478999999999999999999999 88888776553
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=92.78 E-value=0.17 Score=40.00 Aligned_cols=90 Identities=24% Similarity=0.216 Sum_probs=56.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
-.|++|.|+|.|.+|...+++++.+|+ +|++.++..... .....+... . .++.+.+.. .|+|.-++
T Consensus 47 L~gktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~-~~~~~~~~~---~----~~l~~ll~~-----sD~i~~~~ 112 (193)
T d1mx3a1 47 IRGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLSDG-VERALGLQR---V----STLQDLLFH-----SDCVTLHC 112 (193)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCTT-HHHHHTCEE---C----SSHHHHHHH-----CSEEEECC
T ss_pred eeCceEEEeccccccccceeeeecccc-ceeeccCccccc-chhhhcccc---c----cchhhcccc-----CCEEEEee
Confidence 468999999999999999999999999 899987765432 222333321 1 223333333 67666544
Q ss_pred CC-HHH----HHHHHHHhccCCceEEEEcc
Q 017431 265 GN-VSV----MRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 265 g~-~~~----~~~~~~~l~~~~G~iv~~g~ 289 (371)
.. +++ -...++.|+++ ..+|-++.
T Consensus 113 plt~~T~~li~~~~l~~mk~~-a~lIN~sR 141 (193)
T d1mx3a1 113 GLNEHNHHLINDFTVKQMRQG-AFLVNTAR 141 (193)
T ss_dssp CCCTTCTTSBSHHHHTTSCTT-EEEEECSC
T ss_pred cccccchhhhhHHHHhccCCC-CeEEecCC
Confidence 42 111 23456667775 66665543
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=92.77 E-value=0.21 Score=39.04 Aligned_cols=89 Identities=24% Similarity=0.251 Sum_probs=58.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
..|+++.|+|.|.+|...+++++.+|+ +|++.++...+.+. ...+... .++.+.+.+ .|+|.-++
T Consensus 42 l~~k~vgiiG~G~IG~~va~~~~~fg~-~v~~~d~~~~~~~~-~~~~~~~--------~~l~ell~~-----sDiv~~~~ 106 (184)
T d1ygya1 42 IFGKTVGVVGLGRIGQLVAQRIAAFGA-YVVAYDPYVSPARA-AQLGIEL--------LSLDDLLAR-----ADFISVHL 106 (184)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCHHHH-HHHTCEE--------CCHHHHHHH-----CSEEEECC
T ss_pred ccceeeeeccccchhHHHHHHhhhccc-eEEeecCCCChhHH-hhcCcee--------ccHHHHHhh-----CCEEEEcC
Confidence 467899999999999999999999999 99999876654333 3333321 123333333 67777655
Q ss_pred CC-HHH----HHHHHHHhccCCceEEEEcc
Q 017431 265 GN-VSV----MRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 265 g~-~~~----~~~~~~~l~~~~G~iv~~g~ 289 (371)
.- +++ -...++.|+++ ..+|-++.
T Consensus 107 Plt~~T~~lin~~~l~~mk~~-a~lIN~sR 135 (184)
T d1ygya1 107 PKTPETAGLIDKEALAKTKPG-VIIVNAAR 135 (184)
T ss_dssp CCSTTTTTCBCHHHHTTSCTT-EEEEECSC
T ss_pred CCCchhhhhhhHHHHhhhCCC-ceEEEecc
Confidence 43 221 24666777775 77766644
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.76 E-value=0.041 Score=45.04 Aligned_cols=75 Identities=23% Similarity=0.313 Sum_probs=46.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHhcCCcEE-ecCCCCCchHHHHHHhhcCCCccEEEE
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFE 262 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~-~~v~~v~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~~~~~~gg~dvvid 262 (371)
++++|||+|+ |.+|...++.+...|. .+|+++++++.+...-..-..... .|..+ . +.+.+.. .++|+++.
T Consensus 13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~----~-~~~~~~~-~~~d~vi~ 86 (232)
T d2bkaa1 13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEK----L-DDYASAF-QGHDVGFC 86 (232)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGG----G-GGGGGGG-SSCSEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeecccc----c-ccccccc-cccccccc
Confidence 3479999988 9999999988887774 489998886643322111112111 22221 1 1222222 26999999
Q ss_pred ccCC
Q 017431 263 CIGN 266 (371)
Q Consensus 263 ~~g~ 266 (371)
+++.
T Consensus 87 ~~~~ 90 (232)
T d2bkaa1 87 CLGT 90 (232)
T ss_dssp CCCC
T ss_pred cccc
Confidence 9886
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=92.71 E-value=0.074 Score=43.42 Aligned_cols=39 Identities=23% Similarity=0.219 Sum_probs=33.9
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
....+++|+|+|+|+.|+.++..++..|+ .|++++..++
T Consensus 45 ~~~~~k~VvIIGaGpAGl~aA~~l~~~G~-~v~l~E~~~~ 83 (233)
T d1djqa3 45 QTKNKDSVLIVGAGPSGSEAARVLMESGY-TVHLTDTAEK 83 (233)
T ss_dssp CCSSCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred cccCCceEEEEcccHHHHHHHHHHHHhcc-ceeeEeeccc
Confidence 34567899999999999999999999999 8999987664
|
| >d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein TTHA1280, middle and C-terminal domains species: Thermus thermophilus [TaxId: 274]
Probab=92.70 E-value=0.16 Score=43.57 Aligned_cols=98 Identities=17% Similarity=0.125 Sum_probs=59.2
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCcE--EecCCCCCchHHHHHHhhc-CC-
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLVDLT-DG- 255 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~~--vi~~~~~~~~~~~~~~~~~-~g- 255 (371)
..+|++||=+++|. |..++.+|+ |+..|++++.+++..+.+++ .|.+. ++. .+..+.+.... .+
T Consensus 143 ~~~g~rVLDl~~gt-G~~s~~~a~--g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~-----~d~~~~~~~~~~~~~ 214 (318)
T d1wxxa2 143 RFRGERALDVFSYA-GGFALHLAL--GFREVVAVDSSAEALRRAEENARLNGLGNVRVLE-----ANAFDLLRRLEKEGE 214 (318)
T ss_dssp GCCEEEEEEETCTT-THHHHHHHH--HEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEE-----SCHHHHHHHHHHTTC
T ss_pred HhCCCeeeccCCCC-cHHHHHHHh--cCCcEEeecchHHHHHHHHHHHHHcCCCCcceee-----ccHHHHhhhhHhhhc
Confidence 34689998886532 333345554 33499999999998877753 45432 222 22222222222 23
Q ss_pred CccEEEEccC-----C----------HHHHHHHHHHhccCCceEEEEccC
Q 017431 256 GVDYSFECIG-----N----------VSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 256 g~dvvid~~g-----~----------~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
.||+|+--.+ . ..++..+++.|++| |.++....+
T Consensus 215 ~fD~Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpG-G~Lv~~scs 263 (318)
T d1wxxa2 215 RFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEG-GILATASCS 263 (318)
T ss_dssp CEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEE-EEEEEEECC
T ss_pred CCCEEEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEeCC
Confidence 7998884211 1 23567888899997 999887553
|
| >d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Caenorhabditis elegans [TaxId: 6239]
Probab=92.70 E-value=0.31 Score=41.50 Aligned_cols=101 Identities=18% Similarity=0.072 Sum_probs=63.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCc--EEecCCCC---CchHHHHHHhhcCCCccEE
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT--EFVNPKDH---DKPIQQVLVDLTDGGVDYS 260 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~--~vi~~~~~---~~~~~~~~~~~~~gg~dvv 260 (371)
..++|||+|.|. |..+-.++++....+|.+++.+++-.+.++++-.. ..++.... -.+..+.+++ ++..+|+|
T Consensus 106 ~pk~VLIiGgG~-G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~Da~~~l~~-~~~~yDvI 183 (312)
T d2b2ca1 106 DPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKN-HKNEFDVI 183 (312)
T ss_dssp SCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHH-CTTCEEEE
T ss_pred CCCeEEEeCCCc-hHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEchHHHHHHh-CCCCCCEE
Confidence 457999998753 34445677777777999999999988888875321 00100000 1233344544 44489988
Q ss_pred EEccCC----------HHHHHHHHHHhccCCceEEEEcc
Q 017431 261 FECIGN----------VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 261 id~~g~----------~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
+--+.. .+.++.+.++|+++ |.++..+.
T Consensus 184 I~D~~dp~~~~~~L~t~eFy~~~~~~L~~~-Gi~v~q~~ 221 (312)
T d2b2ca1 184 ITDSSDPVGPAESLFGQSYYELLRDALKED-GILSSQGE 221 (312)
T ss_dssp EECCC-------------HHHHHHHHEEEE-EEEEEECC
T ss_pred EEcCCCCCCcchhhhhHHHHHHHHhhcCCC-cEEEEecC
Confidence 842222 34578888999997 99988754
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=92.69 E-value=0.097 Score=38.11 Aligned_cols=40 Identities=33% Similarity=0.371 Sum_probs=33.6
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 182 ~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
..-.++++|+|+|+|.+|+-+++.+..+|. +|+.+.+.+.
T Consensus 25 ~~~~~~k~vvViGgG~iG~E~A~~l~~~g~-~Vtlie~~~~ 64 (123)
T d1nhpa2 25 TVDPEVNNVVVIGSGYIGIEAAEAFAKAGK-KVTVIDILDR 64 (123)
T ss_dssp HTCTTCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred hhccCCCEEEEECChHHHHHHHHHhhccce-EEEEEEecCc
Confidence 334567899999999999999999999999 8999977643
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=92.69 E-value=0.042 Score=45.04 Aligned_cols=37 Identities=30% Similarity=0.263 Sum_probs=31.8
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKF 224 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~ 224 (371)
++++||+|+ +++|.+.++.+...|+ +|+.+++++++.
T Consensus 1 DK~alITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~~ 38 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARGY-RVVVLDLRREGE 38 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCCSS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcccc
Confidence 468899988 8999999998889999 899998877643
|
| >d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative oxidoreductase VCA1048 species: Vibrio cholerae [TaxId: 666]
Probab=92.58 E-value=0.36 Score=36.84 Aligned_cols=89 Identities=19% Similarity=0.173 Sum_probs=57.5
Q ss_pred EEEEEcCChHHHH-HHHHHHHc-CCCeEEEEcCChhhHH-HHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 189 IVAVFGLGTVGLA-VAEGAKAA-GASRVIGIDIDPKKFD-RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 189 ~VlI~Gag~vG~~-ai~la~~~-g~~~v~~v~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
+|.|+|+|.+|.- .+...+.. +. .+++++.++++.+ +.++++....+. ++.+.+ + ..+|+|+-|+.
T Consensus 3 rvgiiG~G~~~~~~~~~~l~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~------~~~~ll-~---~~iD~V~I~tp 71 (167)
T d1xeaa1 3 KIAMIGLGDIAQKAYLPVLAQWPDI-ELVLCTRNPKVLGTLATRYRVSATCT------DYRDVL-Q---YGVDAVMIHAA 71 (167)
T ss_dssp EEEEECCCHHHHHTHHHHHTTSTTE-EEEEECSCHHHHHHHHHHTTCCCCCS------STTGGG-G---GCCSEEEECSC
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCCc-EEEEEECCHHHHHHHHHhcccccccc------cHHHhc-c---cccceeccccc
Confidence 6789999999854 45555555 45 6667777777655 445677654332 222222 1 26999999988
Q ss_pred CHHHHHHHHHHhccCCceEEEEccC
Q 017431 266 NVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 266 ~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
.....+.+..++..+ .=|.+..+
T Consensus 72 ~~~H~~~~~~al~~g--k~V~~EKP 94 (167)
T d1xeaa1 72 TDVHSTLAAFFLHLG--IPTFVDKP 94 (167)
T ss_dssp GGGHHHHHHHHHHTT--CCEEEESC
T ss_pred ccccccccccccccc--cccccCCC
Confidence 866678888888874 44556443
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=92.55 E-value=0.066 Score=45.64 Aligned_cols=38 Identities=24% Similarity=0.303 Sum_probs=32.3
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
.....++|+|+|+|..|++++..+...|. +|++++..+
T Consensus 26 ~~~~pkkV~IIGaG~aGLsaA~~L~~~G~-~V~vlE~~~ 63 (370)
T d2iida1 26 ATSNPKHVVIVGAGMAGLSAAYVLAGAGH-QVTVLEASE 63 (370)
T ss_dssp CCSSCCEEEEECCBHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred CCCCCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence 34456799999999999999988888899 999998654
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=92.54 E-value=0.14 Score=44.62 Aligned_cols=33 Identities=27% Similarity=0.315 Sum_probs=28.0
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
+.|||+|+ |-+|...+..+...|. .|+++++..
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~-~V~~~~r~~ 35 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRRA 35 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC--
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcC-EEEEEECCC
Confidence 67899987 9999999999999999 899998754
|
| >d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: COMT-like domain: COMT domain-containing protein 1, COMTD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.51 E-value=0.17 Score=40.82 Aligned_cols=103 Identities=16% Similarity=0.160 Sum_probs=64.1
Q ss_pred cCCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----cCCcEEecCCCCCchHHHHHHh----
Q 017431 181 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVD---- 251 (371)
Q Consensus 181 ~~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~v~~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~---- 251 (371)
..+....++||=+|++ .|..++.+|+++. -.+|+.++.+++..+.+++ .|....+.... .+..+.+.+
T Consensus 54 L~~~~~~k~vLEiGt~-~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~--Gda~e~l~~~~~~ 130 (219)
T d2avda1 54 LARLIQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRL--KPALETLDELLAA 130 (219)
T ss_dssp HHHHTTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEE--SCHHHHHHHHHHT
T ss_pred HHHccCCCeEEEEech-hhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEEE--eehhhcchhhhhh
Confidence 3344556899999885 5777888888764 2399999999987666653 45432111111 222222222
Q ss_pred hcCCCccEEEEccCC---HHHHHHHHHHhccCCceEEEE
Q 017431 252 LTDGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 252 ~~~gg~dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~ 287 (371)
...+.||+||--... ...++.+++.|++| |.++.=
T Consensus 131 ~~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~G-Gvii~D 168 (219)
T d2avda1 131 GEAGTFDVAVVDADKENCSAYYERCLQLLRPG-GILAVL 168 (219)
T ss_dssp TCTTCEEEEEECSCSTTHHHHHHHHHHHEEEE-EEEEEE
T ss_pred cccCCccEEEEeCCHHHHHHHHHHHHHHhcCC-cEEEEe
Confidence 223379988843332 34578999999996 877653
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=92.49 E-value=0.097 Score=37.66 Aligned_cols=35 Identities=23% Similarity=0.290 Sum_probs=31.2
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
.++|+|+|+|.+|+-+++.++.+|. +|+.+.+.+.
T Consensus 21 p~~vvIiGgG~ig~E~A~~l~~~G~-~Vtlve~~~~ 55 (116)
T d1gesa2 21 PERVAVVGAGYIGVELGGVINGLGA-KTHLFEMFDA 55 (116)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred CCEEEEECCChhhHHHHHHhhcccc-EEEEEeecch
Confidence 4789999999999999999999999 9999977654
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=92.43 E-value=0.2 Score=39.55 Aligned_cols=90 Identities=13% Similarity=0.192 Sum_probs=56.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
.|++|.|+|.|.+|...+++++..|+ +|+..++...........+... . .++.+.+.+ .|+|..++.
T Consensus 46 ~g~tvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~---~----~~l~~ll~~-----sD~v~l~~p 112 (191)
T d1gdha1 46 DNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASSSDEASYQATF---H----DSLDSLLSV-----SQFFSLNAP 112 (191)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHHHHTCEE---C----SSHHHHHHH-----CSEEEECCC
T ss_pred cccceEEeecccchHHHHHHHHhhcc-ccccccccccccchhhcccccc---c----CCHHHHHhh-----CCeEEecCC
Confidence 58999999999999999999999999 8998887654333322222211 1 223333333 677665443
Q ss_pred C-HHH----HHHHHHHhccCCceEEEEcc
Q 017431 266 N-VSV----MRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 266 ~-~~~----~~~~~~~l~~~~G~iv~~g~ 289 (371)
- +++ -...++.|+++ ..+|-++.
T Consensus 113 lt~~T~~li~~~~l~~mk~~-a~lIN~sR 140 (191)
T d1gdha1 113 STPETRYFFNKATIKSLPQG-AIVVNTAR 140 (191)
T ss_dssp CCTTTTTCBSHHHHTTSCTT-EEEEECSC
T ss_pred CCchHhheecHHHhhCcCCc-cEEEecCC
Confidence 2 111 24566677775 66665543
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=92.40 E-value=0.11 Score=37.76 Aligned_cols=35 Identities=20% Similarity=0.442 Sum_probs=31.2
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
.++++|+|+|.+|+-+++++..+|+ +|..+.+.+.
T Consensus 23 p~~~vIiG~G~ig~E~A~~l~~lG~-~Vtii~~~~~ 57 (122)
T d1v59a2 23 PKRLTIIGGGIIGLEMGSVYSRLGS-KVTVVEFQPQ 57 (122)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred CCeEEEECCCchHHHHHHHHHhhCc-ceeEEEeccc
Confidence 3799999999999999999999999 9999977553
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=92.32 E-value=0.62 Score=35.80 Aligned_cols=99 Identities=23% Similarity=0.267 Sum_probs=61.2
Q ss_pred EEEEEcCChHHHHHHHHHHHcC-CCeEEEE-cCCh-hhHHHHHhcCCcEEecCCCCCchHHHH-------HHhhcCCCcc
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAG-ASRVIGI-DIDP-KKFDRAKNFGVTEFVNPKDHDKPIQQV-------LVDLTDGGVD 258 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g-~~~v~~v-~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~~-------~~~~~~gg~d 258 (371)
+|.|.|.|-+|....+.+.... . .++++ +.++ .....+.+++.+......+....+... +.+. ..++|
T Consensus 4 rIaINGfGRIGR~v~Ral~~~~di-eiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~vD 81 (172)
T d2czca2 4 KVGVNGYGTIGKRVAYAVTKQDDM-ELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDL-LEKVD 81 (172)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTE-EEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHH-HTTCS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCc-eEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhh-hccCC
Confidence 6889999999998888775543 4 55555 3332 344556666654433221100011000 0000 02699
Q ss_pred EEEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 259 YSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 259 vvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+|+||+|.-...+.+-..+..| .+.|.++..
T Consensus 82 vViEcTG~f~~~~~~~~hl~~G-~k~Vi~s~~ 112 (172)
T d2czca2 82 IIVDATPGGIGAKNKPLYEKAG-VKAIFQGGE 112 (172)
T ss_dssp EEEECCSTTHHHHHHHHHHHHT-CEEEECTTS
T ss_pred EEEECCCCCCCHHHHHHHHHcC-CCEEEECCC
Confidence 9999999977788888889996 888888764
|
| >d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Escherichia coli, isoform B (CysM) [TaxId: 562]
Probab=92.31 E-value=0.68 Score=38.75 Aligned_cols=110 Identities=15% Similarity=0.182 Sum_probs=68.8
Q ss_pred hhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEc--CChhhHHHHHhcCCcEEecCCCC---------------
Q 017431 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID--IDPKKFDRAKNFGVTEFVNPKDH--------------- 241 (371)
Q Consensus 179 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~--~~~~~~~~~~~~g~~~vi~~~~~--------------- 241 (371)
.+.+.+.++.+|+...+|..|+++...|+.+|.+-++.+. .++.+.+.++.+|+..++...+.
T Consensus 52 ~~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~~~~~a~~~~~~~~~~ 131 (292)
T d2bhsa1 52 EKRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANR 131 (292)
T ss_dssp HHTTSCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHH
T ss_pred HHhCCcCCCceeeeecccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHHHhCCCcceeecccchHHHHHHHhhcccc
Confidence 3455666677666667799999999999999984333332 25567788899998644322221
Q ss_pred ----------Cc--------hHHHHHHhhcCCCccEEEEccCCHHHHHHHH---HHhccCCceEEEEcc
Q 017431 242 ----------DK--------PIQQVLVDLTDGGVDYSFECIGNVSVMRAAL---ECCHKGWGTSVIVGV 289 (371)
Q Consensus 242 ----------~~--------~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~---~~l~~~~G~iv~~g~ 289 (371)
+. ....++.+..++.+|.++.++|+..++.-.. +...+. .+++.+..
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~-~~i~~Vep 199 (292)
T d2bhsa1 132 GEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKP-VTIVGLQP 199 (292)
T ss_dssp TSSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSC-CEEEEEEE
T ss_pred ccccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCc-ceEEEecc
Confidence 00 1223444444557899999888755544444 444554 66666543
|
| >d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Cystathionine beta-synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.27 E-value=0.64 Score=40.27 Aligned_cols=110 Identities=17% Similarity=0.261 Sum_probs=70.5
Q ss_pred hhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEc--CChhhHHHHHhcCCcEEecCCCC---------------
Q 017431 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID--IDPKKFDRAKNFGVTEFVNPKDH--------------- 241 (371)
Q Consensus 179 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~--~~~~~~~~~~~~g~~~vi~~~~~--------------- 241 (371)
.+.+.+++++.|+...+|..|.+....|+.+|.+-++.+. .+++|.+.++.+|+.-+......
T Consensus 89 ~~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~~~~~~~~~ 168 (355)
T d1jbqa_ 89 ERDGTLKPGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRL 168 (355)
T ss_dssp HHHTCSCTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHH
T ss_pred HHcCCcccCceEEEecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHHhcCCeEEEecccccchhhhhhhhHHHHH
Confidence 3555667777766667799999999999999994444442 34468888899999654321100
Q ss_pred ---------------C-------chHHHHHHhhcCCCccEEEEccCCHHHH---HHHHHHhccCCceEEEEcc
Q 017431 242 ---------------D-------KPIQQVLVDLTDGGVDYSFECIGNVSVM---RAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 242 ---------------~-------~~~~~~~~~~~~gg~dvvid~~g~~~~~---~~~~~~l~~~~G~iv~~g~ 289 (371)
+ .....++.+..++.+|.++.++|+..++ -..++...+. -+++.+..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~-~kii~vep 240 (355)
T d1jbqa_ 169 KNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPG-CRIIGVDP 240 (355)
T ss_dssp HHHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEEEE
T ss_pred HHhccccccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCc-ceEEeecc
Confidence 0 1122344444455789999999985543 3444455565 77776644
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=92.23 E-value=0.12 Score=37.38 Aligned_cols=36 Identities=25% Similarity=0.314 Sum_probs=31.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
..++++|+|+|.+|+=.++.+..+|. +|..+.+.+.
T Consensus 21 ~p~~i~IiG~G~ig~E~A~~l~~~G~-~Vtiv~~~~~ 56 (119)
T d3lada2 21 VPGKLGVIGAGVIGLELGSVWARLGA-EVTVLEAMDK 56 (119)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred CCCeEEEECCChHHHHHHHHHHHcCC-ceEEEEeecc
Confidence 34889999999999999999999999 8888876543
|
| >d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein SMu776, middle and C-terminal domains species: Streptococcus mutans [TaxId: 1309]
Probab=92.22 E-value=0.58 Score=39.87 Aligned_cols=99 Identities=13% Similarity=0.077 Sum_probs=61.9
Q ss_pred CCCCCCCEEEEEc--CChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCc----EEecCCCCCchHHHHHHh
Q 017431 182 AKVEPGSIVAVFG--LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT----EFVNPKDHDKPIQQVLVD 251 (371)
Q Consensus 182 ~~~~~g~~VlI~G--ag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~----~vi~~~~~~~~~~~~~~~ 251 (371)
..+.+|++||=+. .|+.+++| ...|++.|+.++.++...+++++ .|.+ .++. .+..+.+..
T Consensus 140 ~~~~~g~~VLdlf~~~G~~sl~a----a~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~-----~d~~~~l~~ 210 (317)
T d2b78a2 140 NGSAAGKTVLNLFSYTAAFSVAA----AMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVV-----MDVFDYFKY 210 (317)
T ss_dssp HTTTBTCEEEEETCTTTHHHHHH----HHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEE-----SCHHHHHHH
T ss_pred HHhhCCCceeecCCCCcHHHHHH----HhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEE-----ccHHHHHHH
Confidence 4567899999873 36666543 24688889999999988877753 2321 1232 223333333
Q ss_pred hc-CC-CccEEEEccCC---------------HHHHHHHHHHhccCCceEEEEccC
Q 017431 252 LT-DG-GVDYSFECIGN---------------VSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 252 ~~-~g-g~dvvid~~g~---------------~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
.. .+ .||+|+---+. ..++..++++|+++ |.++....+
T Consensus 211 ~~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pg-G~l~~~scs 265 (317)
T d2b78a2 211 ARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSEN-GLIIASTNA 265 (317)
T ss_dssp HHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEE-EEEEEEECC
T ss_pred HHhhcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEeCC
Confidence 22 23 79988732111 23677888999997 999877553
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=92.17 E-value=0.44 Score=36.71 Aligned_cols=44 Identities=18% Similarity=0.184 Sum_probs=36.5
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 232 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~ 232 (371)
.+|-++|.|.+|...+.-+...|+ .|++.++++++.+.+.+.++
T Consensus 3 ~nIg~IGlG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~ 46 (176)
T d2pgda2 3 ADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANEA 46 (176)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTTT
T ss_pred CcEEEEeEhHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHhcc
Confidence 468899999999987777777899 89999999998887765543
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=92.17 E-value=0.32 Score=41.81 Aligned_cols=31 Identities=26% Similarity=0.217 Sum_probs=27.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI 219 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~ 219 (371)
+.|||+|+ |-+|...+..+...|+ +|+++++
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~-~V~~~d~ 33 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGY-DCVVADN 33 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcC-eEEEEEC
Confidence 57999988 9999999999988999 8888864
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=92.14 E-value=0.097 Score=42.78 Aligned_cols=35 Identities=29% Similarity=0.283 Sum_probs=30.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 220 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~ 220 (371)
++-++|+|+|+|..|++++..+...|. +|+++++.
T Consensus 4 ~~~~kVvVIGaGiaGl~~A~~L~~~G~-~V~vier~ 38 (268)
T d1c0pa1 4 HSQKRVVVLGSGVIGLSSALILARKGY-SVHILARD 38 (268)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCcEEEECccHHHHHHHHHHHHCCC-CEEEEeCC
Confidence 345689999999999999999999999 89999864
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=92.08 E-value=0.081 Score=44.06 Aligned_cols=32 Identities=22% Similarity=0.399 Sum_probs=28.2
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 189 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 189 ~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
+|||+|+ |-+|...+..++..|+ .|+++++.+
T Consensus 3 KIlItGasGfiG~~l~~~L~~~g~-~Vi~~~r~~ 35 (281)
T d1vl0a_ 3 KILITGANGQLGREIQKQLKGKNV-EVIPTDVQD 35 (281)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSE-EEEEECTTT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCC-EEEEeechh
Confidence 6899988 9999999999999999 899987653
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=92.07 E-value=0.19 Score=39.45 Aligned_cols=47 Identities=17% Similarity=0.110 Sum_probs=38.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 232 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~ 232 (371)
-.+.+|.|+|.|.+|...+++++.+|. +|+..++........+..+.
T Consensus 42 l~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~ 88 (188)
T d2naca1 42 LEAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNL 88 (188)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTC
T ss_pred ccccceeeccccccchhhhhhhhccCc-eEEEEeeccccccccccccc
Confidence 467899999999999999999999999 89999886655555555443
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=91.80 E-value=0.12 Score=44.56 Aligned_cols=72 Identities=17% Similarity=0.154 Sum_probs=44.0
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC----hhhHHHHHhc---CCcEE-ecCCCCCchHHHHHHhhcCC-Ccc
Q 017431 189 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID----PKKFDRAKNF---GVTEF-VNPKDHDKPIQQVLVDLTDG-GVD 258 (371)
Q Consensus 189 ~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~----~~~~~~~~~~---g~~~v-i~~~~~~~~~~~~~~~~~~g-g~d 258 (371)
+|||+|+ |-+|...+..+...|. .|+++++. .......+++ ++..+ .|-.+ . +.+.+.... ++|
T Consensus 2 KiLItG~tGfIG~~l~~~L~~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~---~~l~~~~~~~~~d 75 (338)
T d1udca_ 2 RVLVTGGSGYIGSHTCVQLLQNGH-DVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN--E---ALMTEILHDHAID 75 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTC--H---HHHHHHHHHTTCS
T ss_pred EEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCC--H---HHHHHHHhccCCC
Confidence 5999988 9999999999999998 88888642 2222222222 23222 22222 2 223333222 799
Q ss_pred EEEEccCC
Q 017431 259 YSFECIGN 266 (371)
Q Consensus 259 vvid~~g~ 266 (371)
+||++++.
T Consensus 76 ~ViHlAa~ 83 (338)
T d1udca_ 76 TVIHFAGL 83 (338)
T ss_dssp EEEECCSC
T ss_pred EEEECCCc
Confidence 99998753
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=91.79 E-value=0.96 Score=34.78 Aligned_cols=91 Identities=15% Similarity=0.095 Sum_probs=58.0
Q ss_pred EEEEEcCChHHHH-HHHHHHHcCCC-eEEE-EcCChhhHH-HHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 189 IVAVFGLGTVGLA-VAEGAKAAGAS-RVIG-IDIDPKKFD-RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 189 ~VlI~Gag~vG~~-ai~la~~~g~~-~v~~-v~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
+|.|+|+|.+|.- .+...+..+-. ++++ +++++++.+ +.++++...++ .++.+.+.+ ..+|+|+-|+
T Consensus 5 rigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~------~~~~ell~~---~~id~v~I~t 75 (181)
T d1zh8a1 5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVF------DSYEELLES---GLVDAVDLTL 75 (181)
T ss_dssp EEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEE------SCHHHHHHS---SCCSEEEECC
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhcccccccee------eeeeccccc---cccceeeccc
Confidence 6789999999864 45666654422 5554 466666554 45667776554 234444332 3699999888
Q ss_pred CCHHHHHHHHHHhccCCceEEEEccC
Q 017431 265 GNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 265 g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
......+.+..++.. |.=|.+..+
T Consensus 76 p~~~h~~~~~~al~~--gk~V~~EKP 99 (181)
T d1zh8a1 76 PVELNLPFIEKALRK--GVHVICEKP 99 (181)
T ss_dssp CGGGHHHHHHHHHHT--TCEEEEESS
T ss_pred ccccccccccccccc--chhhhcCCC
Confidence 875557777777776 555666553
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=91.72 E-value=0.16 Score=37.46 Aligned_cols=39 Identities=28% Similarity=0.358 Sum_probs=33.8
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
.++++++|+|+|+|.+|+-++..++.+|. +|..+++.+.
T Consensus 31 ~~~~~k~v~VIGgG~iG~E~A~~l~~~g~-~Vtvie~~~~ 69 (133)
T d1q1ra2 31 QLIADNRLVVIGGGYIGLEVAATAIKANM-HVTLLDTAAR 69 (133)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred hhccCCEEEEECCchHHHHHHHHHHhhCc-ceeeeeeccc
Confidence 34567999999999999999999999999 8999977654
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=91.59 E-value=0.099 Score=38.05 Aligned_cols=36 Identities=19% Similarity=0.303 Sum_probs=32.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
..++++|+|+|.+|+=++++.+.+|. +|+.+.+.+.
T Consensus 24 ~p~~~viiG~G~iglE~A~~~~~~G~-~Vtvi~~~~~ 59 (123)
T d1dxla2 24 IPKKLVVIGAGYIGLEMGSVWGRIGS-EVTVVEFASE 59 (123)
T ss_dssp CCSEEEESCCSHHHHHHHHHHHHHTC-EEEEECSSSS
T ss_pred cCCeEEEEccchHHHHHHHHHHhcCC-eEEEEEEccc
Confidence 35799999999999999999999999 9999987654
|
| >d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Putative spermidine synthetase PF0127 (SpeE) species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=91.50 E-value=0.18 Score=42.25 Aligned_cols=94 Identities=18% Similarity=0.177 Sum_probs=60.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC--------------c--EEecCCCCCchHHHH
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV--------------T--EFVNPKDHDKPIQQV 248 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~--------------~--~vi~~~~~~~~~~~~ 248 (371)
...++|||+|+|. |..+-.+++. +..+|.+++.+++-.+.++++-. . +++. .+....
T Consensus 71 ~~p~~vLiiG~G~-G~~~~~~l~~-~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~-----~Da~~~ 143 (276)
T d1mjfa_ 71 PKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTI-----GDGFEF 143 (276)
T ss_dssp SCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEE-----SCHHHH
T ss_pred CCCceEEEecCCc-hHHHHHHHHh-CCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEE-----ChHHHH
Confidence 4458999998753 2333444554 45589999999998888876321 0 1221 223333
Q ss_pred HHhhcCCCccEEE-EccCC---------HHHHHHHHHHhccCCceEEEEc
Q 017431 249 LVDLTDGGVDYSF-ECIGN---------VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 249 ~~~~~~gg~dvvi-d~~g~---------~~~~~~~~~~l~~~~G~iv~~g 288 (371)
+++ ++++|+|+ |.... .+.++.+.+.|+++ |.++.-+
T Consensus 144 l~~--~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~-Gv~v~q~ 190 (276)
T d1mjfa_ 144 IKN--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNP-GIYVTQA 190 (276)
T ss_dssp HHH--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred Hhc--cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCC-ceEEEec
Confidence 443 34899887 44432 35688999999997 9988764
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=91.49 E-value=0.1 Score=43.22 Aligned_cols=34 Identities=24% Similarity=0.330 Sum_probs=29.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
.|+|+|+|+.|+++..+++..|..+|++++++++
T Consensus 3 ~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~~ 36 (288)
T d3c96a1 3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSSE 36 (288)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 6899999999999999999999768888877653
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=91.46 E-value=0.92 Score=35.00 Aligned_cols=94 Identities=18% Similarity=0.218 Sum_probs=56.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcC-CCeEEEEc-CChh-hHHHHHhcCCcEEecCCC----------CCchHHHHHHhhcCC
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAG-ASRVIGID-IDPK-KFDRAKNFGVTEFVNPKD----------HDKPIQQVLVDLTDG 255 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g-~~~v~~v~-~~~~-~~~~~~~~g~~~vi~~~~----------~~~~~~~~~~~~~~g 255 (371)
+|.|.|.|-+|....+.+.... . .++++. ..+. ....+...+......... ....+.+...
T Consensus 3 KVaINGfGRIGR~v~Ral~~~~di-evVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~----- 76 (178)
T d1b7go1 3 NVAVNGYGTIGKRVADAIIKQPDM-KLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIK----- 76 (178)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTE-EEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHH-----
T ss_pred EEEEECCCHHHHHHHHHHHhCCCC-EEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhh-----
Confidence 5789999999999999888654 5 666663 3332 333333444322211111 0111211111
Q ss_pred CccEEEEccCCHHHHHHHHHHhccCCceEEEEcc
Q 017431 256 GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 256 g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
++|+|+||+|.....+.+-..+..+ -+.|..+.
T Consensus 77 ~vDiViecTG~f~~~e~a~~hl~~G-~KvIi~~~ 109 (178)
T d1b7go1 77 TSDIVVDTTPNGVGAQYKPIYLQLQ-RNAIFQGG 109 (178)
T ss_dssp HCSEEEECCSTTHHHHHHHHHHHTT-CEEEECTT
T ss_pred cCCEEEECCCCcCCHHHHHHHHHcC-CEEEEECC
Confidence 5899999999866677777778775 66665544
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=91.44 E-value=0.098 Score=44.60 Aligned_cols=44 Identities=25% Similarity=0.283 Sum_probs=34.2
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHhcCC
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFGV 232 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~--~~~~~~~~g~ 232 (371)
++|||+|+ |-+|...+..+...|+ +|+++++... ..+.+++++.
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~l~~~~~ 47 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGI 47 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcccHHHHHHhcc
Confidence 58999988 9999999998888899 8999987543 3345555554
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=91.37 E-value=0.15 Score=36.43 Aligned_cols=35 Identities=23% Similarity=0.355 Sum_probs=30.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
.++++|+|+|.+|+-+++.++.+|+ +|+.+.+.+.
T Consensus 21 p~~vvIiGgG~~G~E~A~~l~~~g~-~Vtlve~~~~ 55 (115)
T d1lvla2 21 PQHLVVVGGGYIGLELGIAYRKLGA-QVSVVEARER 55 (115)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHhhccc-ceEEEeeecc
Confidence 3789999999999999999999999 8999977653
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=91.32 E-value=0.081 Score=43.23 Aligned_cols=33 Identities=24% Similarity=0.402 Sum_probs=28.5
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
+|+|+|+|..|+.|+..++..|..+|++++.++
T Consensus 2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~~ 34 (347)
T d1b5qa1 2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATD 34 (347)
T ss_dssp CEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 489999999999999988889975799998764
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=91.28 E-value=0.1 Score=41.06 Aligned_cols=39 Identities=23% Similarity=0.405 Sum_probs=33.5
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 227 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~ 227 (371)
++|.|+|+|.+|...+.++...|+ +|+..+.+++..+.+
T Consensus 5 ~~vaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~~ 43 (186)
T d1wdka3 5 KQAAVLGAGIMGGGIAYQSASKGT-PILMKDINEHGIEQG 43 (186)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTC-CEEEECSSHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHhhh
Confidence 578999999999998888888899 899999998865544
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=91.28 E-value=1.1 Score=34.52 Aligned_cols=90 Identities=16% Similarity=0.207 Sum_probs=59.9
Q ss_pred EEEEEcCChHHHHHHHHHHHc-CCCeEEEE-cCChhhHH-HHHhcCCc---EEecCCCCCchHHHHHHhhcCCCccEEEE
Q 017431 189 IVAVFGLGTVGLAVAEGAKAA-GASRVIGI-DIDPKKFD-RAKNFGVT---EFVNPKDHDKPIQQVLVDLTDGGVDYSFE 262 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~-g~~~v~~v-~~~~~~~~-~~~~~g~~---~vi~~~~~~~~~~~~~~~~~~gg~dvvid 262 (371)
+|.|+|+|.+|..-++..+.. ++ .++++ +.++++.+ ++++++.. .++ .++.+.+.+ ..+|+|+-
T Consensus 3 ki~iIG~G~~g~~~~~~l~~~~~~-~i~ai~d~~~~~~~~~~~~~~~~~~~~~~------~~~~~ll~~---~~iD~v~I 72 (184)
T d1ydwa1 3 RIGVMGCADIARKVSRAIHLAPNA-TISGVASRSLEKAKAFATANNYPESTKIH------GSYESLLED---PEIDALYV 72 (184)
T ss_dssp EEEEESCCTTHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHHTTCCTTCEEE------SSHHHHHHC---TTCCEEEE
T ss_pred EEEEEcCCHHHHHHHHHHHhCCCC-EEEEEEeCCccccccchhccccccceeec------CcHHHhhhc---cccceeee
Confidence 578899999998888777776 56 66654 66666544 45566642 222 234443332 27999999
Q ss_pred ccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 263 CIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 263 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
++......+.+..++.. |.=|.+..+
T Consensus 73 ~tp~~~h~~~~~~~l~~--g~~v~~EKP 98 (184)
T d1ydwa1 73 PLPTSLHVEWAIKAAEK--GKHILLEKP 98 (184)
T ss_dssp CCCGGGHHHHHHHHHTT--TCEEEECSS
T ss_pred cccchhhcchhhhhhhc--cceeecccc
Confidence 98887768888888887 455556543
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=91.06 E-value=0.32 Score=41.70 Aligned_cols=73 Identities=21% Similarity=0.237 Sum_probs=45.0
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEe--cCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 189 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV--NPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 189 ~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi--~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
+|||+|+ |-+|...++.+...|.-+|++++....+...+.+..--..+ |... ...+.+...+ ++|+|+.+++
T Consensus 2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~-~~~~~~~~~~----~~d~Vih~a~ 76 (342)
T d2blla1 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISI-HSEWIEYHVK----KCDVVLPLVA 76 (342)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTT-CSHHHHHHHH----HCSEEEECBC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCC-hHHHHHHHHh----CCCccccccc
Confidence 6999988 99999999888888843899987765544333222111222 2222 1333333322 5999999877
Q ss_pred C
Q 017431 266 N 266 (371)
Q Consensus 266 ~ 266 (371)
-
T Consensus 77 ~ 77 (342)
T d2blla1 77 I 77 (342)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Arginine methyltransferase, HMT1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.05 E-value=0.2 Score=43.11 Aligned_cols=95 Identities=24% Similarity=0.260 Sum_probs=53.0
Q ss_pred cCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhh---HHHHHhcCCcE---EecCCCCCchHHHHHHhhcC
Q 017431 181 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK---FDRAKNFGVTE---FVNPKDHDKPIQQVLVDLTD 254 (371)
Q Consensus 181 ~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~---~~~~~~~g~~~---vi~~~~~~~~~~~~~~~~~~ 254 (371)
.....+|++||-+|+| .|..++.+|+ .|+++|++++.++.- .+..++.+... ++.... .++ .+..
T Consensus 33 ~~~~~~~~~VLDlGcG-tG~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~~~~~~~i~~i~~~~--~~l-----~~~~ 103 (328)
T d1g6q1_ 33 NKDLFKDKIVLDVGCG-TGILSMFAAK-HGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKL--EDV-----HLPF 103 (328)
T ss_dssp HHHHHTTCEEEEETCT-TSHHHHHHHH-TCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCT--TTS-----CCSS
T ss_pred ccccCCcCEEEEeCCC-CCHHHHHHHH-hCCCEEEEEeCCHHHHHHHHHHHHhCccccceEEEeeh--hhc-----cCcc
Confidence 3345678999999886 3555554444 688899999987631 12223344321 222111 110 1122
Q ss_pred CCccEEEEcc-CC--------HHHHHHHHHHhccCCceEE
Q 017431 255 GGVDYSFECI-GN--------VSVMRAALECCHKGWGTSV 285 (371)
Q Consensus 255 gg~dvvid~~-g~--------~~~~~~~~~~l~~~~G~iv 285 (371)
..+|+|+... +. +..+...-+.|+++ |.++
T Consensus 104 ~~~D~i~se~~~~~~~~e~~~~~~~~a~~r~Lkpg-G~ii 142 (328)
T d1g6q1_ 104 PKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEG-GLIF 142 (328)
T ss_dssp SCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEE-EEEE
T ss_pred cceeEEEEEecceeeccchhHHHHHHHHHhccCCC-eEEE
Confidence 3799988622 21 22344445788996 8875
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=90.96 E-value=2.2 Score=31.50 Aligned_cols=94 Identities=11% Similarity=-0.023 Sum_probs=57.6
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhH-HHH---HhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEc
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF-DRA---KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 263 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~-~~~---~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~ 263 (371)
+.|+|.|.|.+|...++.+...|. .|++++.++++. +.+ ...|...+. -+. .-.+.+++..-..+|.++-+
T Consensus 4 nHiII~G~g~~g~~l~~~L~~~~~-~v~vId~d~~~~~~~~~~~~~~~~~vi~-Gd~---~d~~~L~~a~i~~a~~vi~~ 78 (153)
T d1id1a_ 4 DHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNADVIP-GDS---NDSSVLKKAGIDRCRAILAL 78 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCEEEE-SCT---TSHHHHHHHTTTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCC-CEEEEeccchhHHHHHHHhhcCCcEEEE-ccC---cchHHHHHhccccCCEEEEc
Confidence 468999999999999999999998 788888776542 222 234553332 211 11233444422379999998
Q ss_pred cCCHHH---HHHHHHHhccCCceEEEE
Q 017431 264 IGNVSV---MRAALECCHKGWGTSVIV 287 (371)
Q Consensus 264 ~g~~~~---~~~~~~~l~~~~G~iv~~ 287 (371)
++.... .-...+.+.+. -+++..
T Consensus 79 ~~~d~~n~~~~~~~r~~~~~-~~iia~ 104 (153)
T d1id1a_ 79 SDNDADNAFVVLSAKDMSSD-VKTVLA 104 (153)
T ss_dssp SSCHHHHHHHHHHHHHHTSS-SCEEEE
T ss_pred cccHHHHHHHHHHHHHhCCC-CceEEE
Confidence 887442 22333445553 555544
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.96 E-value=0.14 Score=43.48 Aligned_cols=36 Identities=25% Similarity=0.338 Sum_probs=31.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
++..+|+|+|+|..|+.|+..+...|. +|++.+.++
T Consensus 3 ~~~~kViVIGaG~aGL~aA~~L~~~G~-~V~VlEa~~ 38 (449)
T d2dw4a2 3 KKTGKVIIIGSGVSGLAAARQLQSFGM-DVTLLEARD 38 (449)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence 456789999999999999999999999 899997654
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=90.94 E-value=0.18 Score=36.76 Aligned_cols=37 Identities=19% Similarity=0.287 Sum_probs=31.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
+..++++|+|+|.+|+=.++..+.+|. +|+.+.+.+.
T Consensus 24 ~~p~~vvIiGgG~IG~E~A~~~~~~G~-~Vtive~~~~ 60 (125)
T d1ojta2 24 EVPGKLLIIGGGIIGLEMGTVYSTLGS-RLDVVEMMDG 60 (125)
T ss_dssp CCCSEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSSS
T ss_pred ccCCeEEEECCCHHHHHHHHHhhcCCC-EEEEEEeecc
Confidence 335899999999999999999999999 8999976543
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=90.93 E-value=1.5 Score=33.38 Aligned_cols=94 Identities=23% Similarity=0.311 Sum_probs=59.2
Q ss_pred EEEEEcCChHHHHHHHHHHHcC-CCeEEEEc-CCh-hhHHHHHhcCCcEEecCCCC-----------CchHHHHHHhhcC
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAG-ASRVIGID-IDP-KKFDRAKNFGVTEFVNPKDH-----------DKPIQQVLVDLTD 254 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g-~~~v~~v~-~~~-~~~~~~~~~g~~~vi~~~~~-----------~~~~~~~~~~~~~ 254 (371)
+|.|.|.|-+|....+.+...+ . .++++. .++ .....+.+++.+......+. ..++.+..
T Consensus 3 ~VgINGfGRIGR~v~R~l~~~~di-~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~----- 76 (171)
T d1cf2o1 3 AVAINGYGTVGKRVADAIAQQDDM-KVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDML----- 76 (171)
T ss_dssp EEEEECCSHHHHHHHHHHHTSSSE-EEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHH-----
T ss_pred EEEEEcCcHHHHHHHHHHHhCCCc-eEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhh-----
Confidence 6889999999999888776655 4 565553 322 33445556665443322110 11111111
Q ss_pred CCccEEEEccCCHHHHHHHHHHhccCCceEEEEcc
Q 017431 255 GGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 255 gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
.++|+|+||+|.-...+.+-..+..+ -+.|..+.
T Consensus 77 ~~vDvViEcTG~f~~~~~~~~hl~~G-~K~vi~~~ 110 (171)
T d1cf2o1 77 DEADIVIDCTPEGIGAKNLKMYKEKG-IKAIFQGG 110 (171)
T ss_dssp HTCSEEEECCSTTHHHHHHHHHHHTT-CEEEECTT
T ss_pred cCCCEEEEccCCCCCHHHHHHHHHcC-CCEEEECC
Confidence 16999999999966677788888886 77776654
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=90.93 E-value=0.49 Score=35.38 Aligned_cols=77 Identities=13% Similarity=0.078 Sum_probs=46.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHH
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 268 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~ 268 (371)
+|-|+|.|.+|.+.+.-+...|. .|++.++.+++....+..+....- . ..+.+. ..|+||-|+....
T Consensus 2 kIgiIG~G~mG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~-~------~~e~~~-----~~diIi~~v~~~~ 68 (152)
T d1i36a2 2 RVGFIGFGEVAQTLASRLRSRGV-EVVTSLEGRSPSTIERARTVGVTE-T------SEEDVY-----SCPVVISAVTPGV 68 (152)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTC-EEEECCTTCCHHHHHHHHHHTCEE-C------CHHHHH-----TSSEEEECSCGGG
T ss_pred EEEEEcHHHHHHHHHHHHHHCCC-eEEEEcCchhHHHHHhhhcccccc-c------HHHHHh-----hcCeEEEEecCch
Confidence 57788999999998888888898 788877666554443332222111 1 111111 3777777777655
Q ss_pred HHHHHHHHhc
Q 017431 269 VMRAALECCH 278 (371)
Q Consensus 269 ~~~~~~~~l~ 278 (371)
..+.+.+...
T Consensus 69 ~~~~~~~~~~ 78 (152)
T d1i36a2 69 ALGAARRAGR 78 (152)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHhhcc
Confidence 4444444433
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.92 E-value=0.19 Score=36.48 Aligned_cols=34 Identities=18% Similarity=0.178 Sum_probs=30.8
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
++|+|+|+|.+|+-++..++.+|. +|+.+.+.+.
T Consensus 23 k~vvIvGgG~iG~E~A~~l~~~G~-~Vtlv~~~~~ 56 (125)
T d3grsa2 23 GRSVIVGAGYIAVEMAGILSALGS-KTSLMIRHDK 56 (125)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred CEEEEEcCCccHHHHHHHHhcCCc-EEEEEeeccc
Confidence 789999999999999999999999 8999977653
|
| >d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein Ta1320 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=90.92 E-value=0.22 Score=39.45 Aligned_cols=72 Identities=26% Similarity=0.386 Sum_probs=45.9
Q ss_pred hhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC-cEEecCCCCCchHHHHHHhhcCCCc
Q 017431 179 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV-TEFVNPKDHDKPIQQVLVDLTDGGV 257 (371)
Q Consensus 179 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~-~~vi~~~~~~~~~~~~~~~~~~gg~ 257 (371)
....++ .|++||=.|+|. |..++. +...|+++|++++.+++..+.+++.-. ..++.. + + .+ .++.|
T Consensus 42 ~~~~dl-~Gk~VLDlGcGt-G~l~i~-a~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~-D----~----~~-l~~~f 108 (197)
T d1ne2a_ 42 YNDGNI-GGRSVIDAGTGN-GILACG-SYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVA-D----V----SE-ISGKY 108 (197)
T ss_dssp HHHTSS-BTSEEEEETCTT-CHHHHH-HHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEEC-C----G----GG-CCCCE
T ss_pred HHcCCC-CCCEEEEeCCCC-cHHHHH-HHHcCCCcccccccCHHHHHHHHHccccccEEEE-e----h----hh-cCCcc
Confidence 344555 589999988752 444443 444687789999999999888876433 233322 1 1 12 23589
Q ss_pred cEEEEc
Q 017431 258 DYSFEC 263 (371)
Q Consensus 258 dvvid~ 263 (371)
|+|+..
T Consensus 109 D~Vi~N 114 (197)
T d1ne2a_ 109 DTWIMN 114 (197)
T ss_dssp EEEEEC
T ss_pred eEEEeC
Confidence 999853
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=90.78 E-value=0.38 Score=36.08 Aligned_cols=38 Identities=32% Similarity=0.426 Sum_probs=31.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhh
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKK 223 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g-~~~v~~v~~~~~~ 223 (371)
.+.+|.|+|+|.+|...+..+...+ ++.++.++.++++
T Consensus 5 ~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~ 43 (148)
T d1ldna1 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESK 43 (148)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred CCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeecccc
Confidence 4678999999999998888777777 5679999988876
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=90.78 E-value=0.17 Score=39.31 Aligned_cols=38 Identities=21% Similarity=0.267 Sum_probs=32.5
Q ss_pred EEEEE-cCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 017431 189 IVAVF-GLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 227 (371)
Q Consensus 189 ~VlI~-Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~ 227 (371)
+|.|+ |+|.+|.+..+.+...|+ +|++.+|++++.+.+
T Consensus 2 ki~vigGaG~iG~alA~~la~~G~-~V~l~~R~~e~~~~l 40 (212)
T d1jaya_ 2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSRREEKAEAK 40 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHH
Confidence 57888 679999999999999999 899999998876544
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=90.74 E-value=0.23 Score=43.08 Aligned_cols=37 Identities=22% Similarity=0.284 Sum_probs=31.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 185 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 185 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
.++-+|||+|+ |-+|...+..+...|. .|+++++...
T Consensus 13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~-~V~~~d~~~~ 50 (363)
T d2c5aa1 13 SENLKISITGAGGFIASHIARRLKHEGH-YVIASDWKKN 50 (363)
T ss_dssp TSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCCc
Confidence 35778999988 9999999999999999 8888876443
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=90.74 E-value=0.12 Score=44.21 Aligned_cols=36 Identities=19% Similarity=0.267 Sum_probs=31.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
+.++|+|+|||..|+.++..+...|. +|++++.++.
T Consensus 1 k~KKI~IIGaG~sGL~aA~~L~k~G~-~V~viEk~~~ 36 (314)
T d2bi7a1 1 KSKKILIVGAGFSGAVIGRQLAEKGH-QVHIIDQRDH 36 (314)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCC-CEEEEECCCC
Confidence 35789999999999999999888898 9999987654
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=90.68 E-value=0.14 Score=42.11 Aligned_cols=36 Identities=33% Similarity=0.367 Sum_probs=31.6
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI 219 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~ 219 (371)
.--.|.+|+|.|.|.+|..+++++..+|+ +|++++.
T Consensus 27 ~~l~g~~v~IqGfGnVG~~~a~~L~~~Ga-kvv~vsD 62 (242)
T d1v9la1 27 GGIEGKTVAIQGMGNVGRWTAYWLEKMGA-KVIAVSD 62 (242)
T ss_dssp SCCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEEEC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEeec
Confidence 33578999999999999999999999999 8887754
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=90.59 E-value=0.17 Score=38.81 Aligned_cols=95 Identities=16% Similarity=0.131 Sum_probs=62.7
Q ss_pred hccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCch
Q 017431 166 LLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKP 244 (371)
Q Consensus 166 ~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~ 244 (371)
.+||+....+..|.+..---.|++|+|+|. ..+|.-...++...|+ .|+.+.+... +
T Consensus 16 ~~PcTp~aI~~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~ga-tVt~~h~~t~---------------------~ 73 (166)
T d1b0aa1 16 LRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGC-TTTVTHRFTK---------------------N 73 (166)
T ss_dssp SCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTC-EEEEECSSCS---------------------C
T ss_pred CCCchHHHHHHHHHHcCcccccceEEEEeccccccHHHHHHHHHhhc-cccccccccc---------------------h
Confidence 344444444443433333457999999998 5799999999999999 7877743321 2
Q ss_pred HHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 245 IQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 245 ~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
..+.++ .+|+++.++|.+..+. -..++++ ..++.+|..
T Consensus 74 l~~~~~-----~ADivI~a~G~p~~i~--~~~vk~g-~vvIDvGi~ 111 (166)
T d1b0aa1 74 LRHHVE-----NADLLIVAVGKPGFIP--GDWIKEG-AIVIDVGIN 111 (166)
T ss_dssp HHHHHH-----HCSEEEECSCCTTCBC--TTTSCTT-CEEEECCCE
T ss_pred hHHHHh-----hhhHhhhhccCccccc--ccccCCC-cEEEecCce
Confidence 222222 3899999999876543 3456775 788888764
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=90.51 E-value=0.18 Score=38.53 Aligned_cols=36 Identities=36% Similarity=0.341 Sum_probs=30.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCC-eEEEEcCCh
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGAS-RVIGIDIDP 221 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~-~v~~v~~~~ 221 (371)
.|++|+|+|+|..|+.+++.++..+.+ +|+.++..+
T Consensus 1 ~gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 478999999999999998888888853 688887655
|
| >d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Methyltransferase TTHA0928 species: Thermus thermophilus [TaxId: 274]
Probab=90.37 E-value=1.6 Score=33.18 Aligned_cols=95 Identities=16% Similarity=0.160 Sum_probs=52.7
Q ss_pred CCCCCCEEEEEcC--ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCc-EEecCCCCCchHHHHHHhhcCC
Q 017431 183 KVEPGSIVAVFGL--GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVT-EFVNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 183 ~~~~g~~VlI~Ga--g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~-~vi~~~~~~~~~~~~~~~~~~g 255 (371)
.+.+|.+||=.++ |.+|+.| ...|+ +|++++.+++..+.++ .++.. .+..... ..+.. .....+.
T Consensus 38 ~~~~g~~vLDl~~G~G~~~i~a----~~~ga-~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~--d~~~~-~~~~~~~ 109 (171)
T d1ws6a1 38 RYPRRGRFLDPFAGSGAVGLEA----ASEGW-EAVLVEKDPEAVRLLKENVRRTGLGARVVALPV--EVFLP-EAKAQGE 109 (171)
T ss_dssp HCTTCCEEEEETCSSCHHHHHH----HHTTC-EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCH--HHHHH-HHHHTTC
T ss_pred cccCCCeEEEeccccchhhhhh----hhccc-hhhhcccCHHHHhhhhHHHHhhccccceeeeeh--hcccc-cccccCC
Confidence 4577888887744 6666533 34588 7889999998877664 35553 3433221 11211 1222233
Q ss_pred CccEEE-Ec---cCCHHHHHHHHH--HhccCCceEEE
Q 017431 256 GVDYSF-EC---IGNVSVMRAALE--CCHKGWGTSVI 286 (371)
Q Consensus 256 g~dvvi-d~---~g~~~~~~~~~~--~l~~~~G~iv~ 286 (371)
.||+|| |. .+-...+..++. .++++ |.++.
T Consensus 110 ~fD~If~DPPY~~~~~~~l~~l~~~~ll~~~-g~ivi 145 (171)
T d1ws6a1 110 RFTVAFMAPPYAMDLAALFGELLASGLVEAG-GLYVL 145 (171)
T ss_dssp CEEEEEECCCTTSCTTHHHHHHHHHTCEEEE-EEEEE
T ss_pred ccceeEEccccccCHHHHHHHHHHcCCcCCC-eEEEE
Confidence 799997 32 222233444433 46775 76553
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=90.35 E-value=0.12 Score=43.45 Aligned_cols=33 Identities=24% Similarity=0.354 Sum_probs=29.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
.|+|+|+|+.|+++...++..|. +|++++..++
T Consensus 4 ~V~IvGaGp~Gl~~A~~L~~~G~-~v~vlE~~~~ 36 (292)
T d1k0ia1 4 QVAIIGAGPSGLLLGQLLHKAGI-DNVILERQTP 36 (292)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTC-CEEEECSSCH
T ss_pred CEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCCC
Confidence 58999999999999999999999 8999987653
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.34 E-value=0.33 Score=41.14 Aligned_cols=31 Identities=23% Similarity=0.274 Sum_probs=27.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI 219 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~ 219 (371)
++|||+|+ |-+|...+..+...|. .|+++++
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~g~-~V~~~d~ 33 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMDGH-EVTVVDN 33 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeC
Confidence 68999988 9999999999888999 8998865
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=90.31 E-value=0.19 Score=39.29 Aligned_cols=85 Identities=27% Similarity=0.321 Sum_probs=56.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
-.|++|.|+|.|.+|...+++++.+|+ +|++.++.... +..... .++.+.+. ..|+++.++
T Consensus 40 l~gk~vgIiG~G~IG~~va~~l~~~g~-~v~~~d~~~~~-------~~~~~~------~~l~ell~-----~sDiv~~~~ 100 (181)
T d1qp8a1 40 IQGEKVAVLGLGEIGTRVGKILAALGA-QVRGFSRTPKE-------GPWRFT------NSLEEALR-----EARAAVCAL 100 (181)
T ss_dssp CTTCEEEEESCSTHHHHHHHHHHHTTC-EEEEECSSCCC-------SSSCCB------SCSHHHHT-----TCSEEEECC
T ss_pred ccCceEEEeccccccccceeeeecccc-ccccccccccc-------cceeee------echhhhhh-----ccchhhccc
Confidence 458999999999999999999999999 99999876431 111111 12222222 478888765
Q ss_pred CC-HHH----HHHHHHHhccCCceEEEEcc
Q 017431 265 GN-VSV----MRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 265 g~-~~~----~~~~~~~l~~~~G~iv~~g~ 289 (371)
.- +++ -...++.|+++ ..+|.++.
T Consensus 101 pl~~~t~~li~~~~l~~mk~~-ailIN~~R 129 (181)
T d1qp8a1 101 PLNKHTRGLVKYQHLALMAED-AVFVNVGR 129 (181)
T ss_dssp CCSTTTTTCBCHHHHTTSCTT-CEEEECSC
T ss_pred ccccccccccccceeeecccc-ceEEeccc
Confidence 43 111 25667778885 77776643
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.31 E-value=0.33 Score=37.32 Aligned_cols=96 Identities=17% Similarity=0.193 Sum_probs=64.0
Q ss_pred hhccccchhhhhhhhhcCCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCc
Q 017431 165 CLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDK 243 (371)
Q Consensus 165 a~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~ 243 (371)
+.+||+....+..|.+..---.|++|+|+|. ..+|.-...++...|+ .|+.+.+....
T Consensus 17 ~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~ga-tVt~~~~~t~~-------------------- 75 (170)
T d1a4ia1 17 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNA-TVTTCHSKTAH-------------------- 75 (170)
T ss_dssp CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTCSS--------------------
T ss_pred CCCCChHHHHHHHHHHhCcccccceEEEEecCCccchHHHHHHHhccC-ceEEEeccccc--------------------
Confidence 3455555544444444433458999999998 6799999999999999 88887543221
Q ss_pred hHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 244 PIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 244 ~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
..+.++ .+|+++.++|.+..+. -..++++ ..++++|..
T Consensus 76 -l~~~~~-----~aDivi~a~G~~~~i~--~~~vk~g-~iviDvgi~ 113 (170)
T d1a4ia1 76 -LDEEVN-----KGDILVVATGQPEMVK--GEWIKPG-AIVIDCGIN 113 (170)
T ss_dssp -HHHHHT-----TCSEEEECCCCTTCBC--GGGSCTT-CEEEECCCB
T ss_pred -HHHHHh-----hccchhhccccccccc--cccccCC-CeEeccCcc
Confidence 111111 4889999999876433 3467775 788888764
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=90.20 E-value=0.13 Score=42.68 Aligned_cols=41 Identities=15% Similarity=0.158 Sum_probs=31.9
Q ss_pred CCCEEEEEcC-ChHHHHHH-HHHHH--cCCCeEEEEcCChhhHHHH
Q 017431 186 PGSIVAVFGL-GTVGLAVA-EGAKA--AGASRVIGIDIDPKKFDRA 227 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai-~la~~--~g~~~v~~v~~~~~~~~~~ 227 (371)
+|+.+||+|+ +++|.+.+ +||+. .|+ +|+.+++++++.+.+
T Consensus 5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~-~Vv~~~r~~~~l~~~ 49 (259)
T d1oaaa_ 5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQL 49 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHhcccCCC-EEEEEECCHHHHHHH
Confidence 5678888988 89999855 45663 688 999999998876644
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=90.12 E-value=0.16 Score=41.81 Aligned_cols=34 Identities=35% Similarity=0.560 Sum_probs=28.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
+.|||+|+ +++|.+.++.+...|+ +|+.++++++
T Consensus 2 kVvlITGas~GIG~aiA~~la~~Ga-~V~~~~~~~~ 36 (257)
T d1fjha_ 2 SIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDA 36 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECChH
Confidence 46789987 8999999999999999 8998887654
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=90.10 E-value=0.61 Score=36.02 Aligned_cols=84 Identities=12% Similarity=0.094 Sum_probs=48.5
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHhcCCcEEecCCC------CCchHHHHHHhhcCCCccEE
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFGVTEFVNPKD------HDKPIQQVLVDLTDGGVDYS 260 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~--~~~~~~~~g~~~vi~~~~------~~~~~~~~~~~~~~gg~dvv 260 (371)
+|.|+|+|..|.+.+..+-..|. +|....+..+ ..+.+.+..-...+.... ...+..+.+ ...|++
T Consensus 2 kI~ViGaG~~GtalA~~la~~g~-~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~ad~I 75 (180)
T d1txga2 2 IVSILGAGAMGSALSVPLVDNGN-EVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCL-----ENAEVV 75 (180)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCC-EEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHH-----TTCSEE
T ss_pred EEEEECCCHHHHHHHHHHHHCCC-EEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHH-----hccchh
Confidence 58899999999998877777787 8888876433 233332211100000000 012232222 258999
Q ss_pred EEccCCHHHHHHHHHHhcc
Q 017431 261 FECIGNVSVMRAALECCHK 279 (371)
Q Consensus 261 id~~g~~~~~~~~~~~l~~ 279 (371)
+.++.... ++..++.+.+
T Consensus 76 i~avps~~-~~~~~~~l~~ 93 (180)
T d1txga2 76 LLGVSTDG-VLPVMSRILP 93 (180)
T ss_dssp EECSCGGG-HHHHHHHHTT
T ss_pred hcccchhh-hHHHHHhhcc
Confidence 99999844 6666655543
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=89.97 E-value=0.17 Score=40.27 Aligned_cols=86 Identities=21% Similarity=0.195 Sum_probs=55.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
.|++|.|+|.|.+|...+++++.+|+ +|++.++...+.. .... .. .++.+.+.+ .|++.-++.
T Consensus 44 ~~ktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~---~~~~----~~----~~l~~l~~~-----~D~v~~~~p 106 (199)
T d1dxya1 44 GQQTVGVMGTGHIGQVAIKLFKGFGA-KVIAYDPYPMKGD---HPDF----DY----VSLEDLFKQ-----SDVIDLHVP 106 (199)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSSC---CTTC----EE----CCHHHHHHH-----CSEEEECCC
T ss_pred cceeeeeeecccccccccccccccce-eeeccCCccchhh---hcch----hH----HHHHHHHHh-----cccceeeec
Confidence 57899999999999999999999999 9999987544210 0011 11 123333333 677665544
Q ss_pred C-HHH----HHHHHHHhccCCceEEEEcc
Q 017431 266 N-VSV----MRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 266 ~-~~~----~~~~~~~l~~~~G~iv~~g~ 289 (371)
. +++ -...++.|+++ ..+|-.+.
T Consensus 107 lt~~T~~li~~~~l~~mk~~-a~lIN~aR 134 (199)
T d1dxya1 107 GIEQNTHIINEAAFNLMKPG-AIVINTAR 134 (199)
T ss_dssp CCGGGTTSBCHHHHHHSCTT-EEEEECSC
T ss_pred ccccccccccHHHhhccCCc-eEEEeccc
Confidence 3 221 35566778885 77776644
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=89.81 E-value=0.54 Score=39.17 Aligned_cols=34 Identities=18% Similarity=0.170 Sum_probs=29.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
-++|||+|+ |.+|...+..+...|. .|++++++.
T Consensus 3 k~KILVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~ 37 (312)
T d1qyda_ 3 KSRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPE 37 (312)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCC
Confidence 357999988 9999999998888998 788887754
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=89.73 E-value=0.92 Score=33.64 Aligned_cols=71 Identities=23% Similarity=0.145 Sum_probs=45.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhcCCc-----EEecCCCCCchHHHHHHhhcCCCccEE
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNFGVT-----EFVNPKDHDKPIQQVLVDLTDGGVDYS 260 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g-~~~v~~v~~~~~~~~~~~~~g~~-----~vi~~~~~~~~~~~~~~~~~~gg~dvv 260 (371)
++|.|+|| |.+|.....++...+ ++.++.++.++.+-+.+.-.... ..+.. . .++.+.+ .+.|+|
T Consensus 1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~-~--~~~~~~~-----~~aDiv 72 (144)
T d1mlda1 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLG-P--EQLPDCL-----KGCDVV 72 (144)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEES-G--GGHHHHH-----TTCSEE
T ss_pred CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEc-C--CChHHHh-----CCCCEE
Confidence 47899997 999999988888887 47899999877654333211111 11111 1 2333333 259999
Q ss_pred EEccCC
Q 017431 261 FECIGN 266 (371)
Q Consensus 261 id~~g~ 266 (371)
+-+.|.
T Consensus 73 Vitag~ 78 (144)
T d1mlda1 73 VIPAGV 78 (144)
T ss_dssp EECCSC
T ss_pred EECCCc
Confidence 998885
|
| >d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: BC2162-like domain: Methyltransferase BC2162 species: Bacillus cereus [TaxId: 1396]
Probab=89.62 E-value=0.55 Score=39.18 Aligned_cols=97 Identities=14% Similarity=0.174 Sum_probs=64.6
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----cCCcEEecCCCCCchHHHHHHhhc-CC
Q 017431 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT-DG 255 (371)
Q Consensus 182 ~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~v~~v~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~~~~~-~g 255 (371)
.++.++.+||=+|+| .|..+..+++..+. .+|++++.+++..+.+++ .+....+...+ . .+.. ++
T Consensus 23 ~~~~~~~~ILDiGcG-~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d----~----~~~~~~~ 93 (281)
T d2gh1a1 23 WKITKPVHIVDYGCG-YGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGD----A----TEIELND 93 (281)
T ss_dssp SCCCSCCEEEEETCT-TTHHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESC----T----TTCCCSS
T ss_pred hccCCcCEEEEecCc-CCHHHHHHHHhCCCCCEEEEEecchhHhhhhhcccccccccccccccc----c----ccccccC
Confidence 356778899888987 57888888887642 289999999987776653 34322221111 0 1111 23
Q ss_pred CccEEEEcc-----CC-HHHHHHHHHHhccCCceEEEEc
Q 017431 256 GVDYSFECI-----GN-VSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 256 g~dvvid~~-----g~-~~~~~~~~~~l~~~~G~iv~~g 288 (371)
.||+|+... .. ...++.+.+.|+++ |.++.+.
T Consensus 94 ~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~lii~~ 131 (281)
T d2gh1a1 94 KYDIAICHAFLLHMTTPETMLQKMIHSVKKG-GKIICFE 131 (281)
T ss_dssp CEEEEEEESCGGGCSSHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred CceEEEEehhhhcCCCHHHHHHHHHHHcCcC-cEEEEEE
Confidence 799998642 22 34689999999997 9988764
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=89.46 E-value=0.11 Score=39.13 Aligned_cols=85 Identities=9% Similarity=-0.071 Sum_probs=50.7
Q ss_pred EEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHHHH
Q 017431 191 AVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVM 270 (371)
Q Consensus 191 lI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~~~ 270 (371)
=++|+|.+|.+.+..++..+. .+.+..++.++.+.+.+.+.....+..+ . -...|+||-|+.. ..+
T Consensus 3 gfIG~G~mg~~l~~~L~~~~~-~~~v~~R~~~~~~~l~~~~~~~~~~~~~-----------~-~~~~DiVil~v~d-~~i 68 (153)
T d2i76a2 3 NFVGTGTLTRFFLECLKDRYE-IGYILSRSIDRARNLAEVYGGKAATLEK-----------H-PELNGVVFVIVPD-RYI 68 (153)
T ss_dssp EEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCSSCC-----------C-CC---CEEECSCT-TTH
T ss_pred EEEeCcHHHHHHHHHHHhCCC-EEEEEeCChhhhcchhhcccccccchhh-----------h-hccCcEEEEeccc-hhh
Confidence 357999999988876655443 4456788888887766655433222211 1 1258999999987 447
Q ss_pred HHHHHHhccCCceEEEEcc
Q 017431 271 RAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 271 ~~~~~~l~~~~G~iv~~g~ 289 (371)
...+..++.....++.++.
T Consensus 69 ~~v~~~l~~~~~ivi~~s~ 87 (153)
T d2i76a2 69 KTVANHLNLGDAVLVHCSG 87 (153)
T ss_dssp HHHHTTTCCSSCCEEECCS
T ss_pred hHHHhhhcccceeeeeccc
Confidence 8888888754144455543
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=89.35 E-value=0.1 Score=45.58 Aligned_cols=31 Identities=26% Similarity=0.310 Sum_probs=26.3
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC
Q 017431 189 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI 219 (371)
Q Consensus 189 ~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~ 219 (371)
+|||+|+ |-+|...+..+...|...|++++.
T Consensus 2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~ 33 (361)
T d1kewa_ 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDK 33 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeC
Confidence 6999988 999999999888889866777764
|
| >d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: rRNA methyltransferase RlmA domain: rRNA methyltransferase RlmA species: Escherichia coli [TaxId: 562]
Probab=89.10 E-value=0.28 Score=40.79 Aligned_cols=94 Identities=16% Similarity=0.158 Sum_probs=62.5
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhcCCcE-EecCCCCCchHHHHHHhhcCCCccEEE
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTDGGVDYSF 261 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~-g~~~v~~v~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~~~~~~~~gg~dvvi 261 (371)
..++.+||=+|+| .|..+..+++.. +. .+++++.+++..+.+++..... .+.....+. ...++.||+|+
T Consensus 82 ~~~~~~iLDiGcG-~G~~~~~l~~~~~~~-~~~giD~s~~~~~~a~~~~~~~~~~~~d~~~l-------~~~~~sfD~v~ 152 (268)
T d1p91a_ 82 DDKATAVLDIGCG-EGYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVASSHRL-------PFSDTSMDAII 152 (268)
T ss_dssp CTTCCEEEEETCT-TSTTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECCTTSC-------SBCTTCEEEEE
T ss_pred CCCCCEEEEeCCC-CcHHHHHHHHHCCCC-EEEEecchHhhhhhhhcccccccceeeehhhc-------cCCCCCEEEEe
Confidence 4577888888885 456666677665 45 8999999999888887644322 221111001 11123799999
Q ss_pred EccCCHHHHHHHHHHhccCCceEEEEc
Q 017431 262 ECIGNVSVMRAALECCHKGWGTSVIVG 288 (371)
Q Consensus 262 d~~g~~~~~~~~~~~l~~~~G~iv~~g 288 (371)
....- ..++++.+.|+++ |.++...
T Consensus 153 ~~~~~-~~~~e~~rvLkpg-G~l~~~~ 177 (268)
T d1p91a_ 153 RIYAP-CKAEELARVVKPG-GWVITAT 177 (268)
T ss_dssp EESCC-CCHHHHHHHEEEE-EEEEEEE
T ss_pred ecCCH-HHHHHHHHHhCCC-cEEEEEe
Confidence 75444 4588999999997 9988764
|
| >d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Escherichia coli [TaxId: 562]
Probab=89.01 E-value=0.1 Score=40.97 Aligned_cols=36 Identities=22% Similarity=0.152 Sum_probs=30.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
.++..|+|+|+|+.|+.|+..+..+|. +|+.+++.+
T Consensus 3 ~k~~dVvIIGGGpaGl~AA~~~ar~g~-~v~iie~~~ 38 (190)
T d1trba1 3 TKHSKLLILGSGPAGYTAAVYAARANL-QPVLITGME 38 (190)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHTTTC-CCEEECCSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCC-ceEEEEeec
Confidence 355789999999999999999999999 788887544
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=88.99 E-value=0.29 Score=35.30 Aligned_cols=35 Identities=26% Similarity=0.285 Sum_probs=30.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
.+++|+|+|+|.+|+-++..+..+|. +|+.+.+.+
T Consensus 31 ~~~~vvIiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~ 65 (122)
T d1xhca2 31 NSGEAIIIGGGFIGLELAGNLAEAGY-HVKLIHRGA 65 (122)
T ss_dssp HHSEEEEEECSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred cCCcEEEECCcHHHHHHHHHhhcccc-eEEEEeccc
Confidence 45799999999999999999999999 899997654
|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Hypothetical protein HI0933 species: Haemophilus influenzae [TaxId: 727]
Probab=88.92 E-value=0.2 Score=41.18 Aligned_cols=33 Identities=27% Similarity=0.291 Sum_probs=28.9
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
.|+|+|+|+.|++|+..+...|. +|++++..++
T Consensus 6 DViIIGaG~aGl~aA~~la~~G~-~V~vlEk~~~ 38 (253)
T d2gqfa1 6 ENIIIGAGAAGLFCAAQLAKLGK-SVTVFDNGKK 38 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred cEEEECcCHHHHHHHHHHHHCCC-cEEEEecCCC
Confidence 48899999999998888888898 8999988764
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=88.84 E-value=0.21 Score=42.09 Aligned_cols=36 Identities=31% Similarity=0.355 Sum_probs=30.8
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 186 PGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 186 ~g~~VlI~Ga-g--~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
+|+++||+|+ | ++|.+.++.+...|+ +|+.+.++++
T Consensus 7 ~gK~alVTGass~~GIG~aiA~~la~~Ga-~Vvi~~~~~~ 45 (297)
T d1d7oa_ 7 RGKRAFIAGIADDNGYGWAVAKSLAAAGA-EILVGTWVPA 45 (297)
T ss_dssp TTCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEEEHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCchh
Confidence 6899999997 4 799999999999999 8888876554
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=88.82 E-value=0.2 Score=40.78 Aligned_cols=32 Identities=44% Similarity=0.543 Sum_probs=27.7
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 190 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 190 VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
|+|+|+|+.|+++...+...|. +|++++..+.
T Consensus 5 ViIIGaG~aGl~aA~~la~~G~-~V~liEk~~~ 36 (251)
T d2i0za1 5 VIVIGGGPSGLMAAIGAAEEGA-NVLLLDKGNK 36 (251)
T ss_dssp EEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred EEEECcCHHHHHHHHHHHHCCC-cEEEEeCCCC
Confidence 7899999999998888888899 8999987653
|
| >d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Haemophilus influenzae [TaxId: 727]
Probab=88.69 E-value=1.3 Score=37.41 Aligned_cols=99 Identities=16% Similarity=0.165 Sum_probs=64.8
Q ss_pred hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcC--ChhhHHHHHhcCCcEEecCCCC----------------
Q 017431 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI--DPKKFDRAKNFGVTEFVNPKDH---------------- 241 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~--~~~~~~~~~~~g~~~vi~~~~~---------------- 241 (371)
....+.++++|+...+|.-|+++...|+..|.+-++.+.. +..+.+.++.+|+..+......
T Consensus 54 ~~g~~~~~~~vv~~SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~vv~~~~~~~~~~~~~~~~~~~~~~ 133 (310)
T d1y7la1 54 KDGTLTKGKEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASD 133 (310)
T ss_dssp HTTSSCTTCEEEESCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHC
T ss_pred HcCCCCCCceeeeecCCCchHHHHHHHHHhhccccccchhhhhhhhhhhHHHhCCceEeccCccccchhhHHHHHHHHhh
Confidence 4455677877666677999999999999999965555533 3456777788888655321110
Q ss_pred -----------C--------chHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhc
Q 017431 242 -----------D--------KPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH 278 (371)
Q Consensus 242 -----------~--------~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~ 278 (371)
+ .....++.+..++.+|.++.++|+..++.-....++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~a~Ei~~~~~~~~d~vv~~~G~Gg~~~G~~~~lk 189 (310)
T d1y7la1 134 PSRYVMLKQFENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIK 189 (310)
T ss_dssp TTTEECCCTTTCTHHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHH
T ss_pred cCccccCCCCcchhhHHHhhhhHHHHHHHhcCCCCCEEEecCcCCcchhHHHHHHH
Confidence 0 012234555555579999998888666655555553
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=88.56 E-value=3.3 Score=30.06 Aligned_cols=27 Identities=30% Similarity=0.430 Sum_probs=20.4
Q ss_pred EEEEEcC-ChHHHHHHHHHHHc-CCCeEEE
Q 017431 189 IVAVFGL-GTVGLAVAEGAKAA-GASRVIG 216 (371)
Q Consensus 189 ~VlI~Ga-g~vG~~ai~la~~~-g~~~v~~ 216 (371)
+|.|.|+ |-+|.+.++..... ++ .+++
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~-~l~~ 29 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDL-TLSA 29 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTS-EEEE
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCC-EEEE
Confidence 5889997 99999988877654 56 4444
|
| >d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose-fructose oxidoreductase, N-terminal domain species: Zymomonas mobilis [TaxId: 542]
Probab=88.56 E-value=0.84 Score=36.50 Aligned_cols=91 Identities=18% Similarity=0.259 Sum_probs=57.2
Q ss_pred EEEEEcCChHHHH-HHHHHHHc-CCCeEE-EEcCChhhHH-HHHhcCCc--EEecCCCCCchHHHHHHhhcCC-CccEEE
Q 017431 189 IVAVFGLGTVGLA-VAEGAKAA-GASRVI-GIDIDPKKFD-RAKNFGVT--EFVNPKDHDKPIQQVLVDLTDG-GVDYSF 261 (371)
Q Consensus 189 ~VlI~Gag~vG~~-ai~la~~~-g~~~v~-~v~~~~~~~~-~~~~~g~~--~vi~~~~~~~~~~~~~~~~~~g-g~dvvi 261 (371)
+|.|+|+|.+|.- .+...+.. +. +++ ++++++++.+ +++++|.. .+..+.+ + .++.+. .+|+|+
T Consensus 35 riaiIG~G~~~~~~~~~~~~~~~~~-~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d----~----~ell~~~~iD~V~ 105 (221)
T d1h6da1 35 GYAIVGLGKYALNQILPGFAGCQHS-RIEALVSGNAEKAKIVAAEYGVDPRKIYDYSN----F----DKIAKDPKIDAVY 105 (221)
T ss_dssp EEEEECCSHHHHHTHHHHTTTCSSE-EEEEEECSCHHHHHHHHHHTTCCGGGEECSSS----G----GGGGGCTTCCEEE
T ss_pred EEEEEcCcHHHHHHHHHHHHhCCCc-eEEEEecCCHHHHHHHHHhhccccccccccCc----h----hhhcccccceeee
Confidence 6788899988863 44443433 66 555 5577776654 55677763 2333333 2 232333 799999
Q ss_pred EccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 262 ECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 262 d~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
-++......+.+.++|.. |.=|.+..+
T Consensus 106 I~tp~~~H~~~~~~al~~--gk~v~~EKP 132 (221)
T d1h6da1 106 IILPNSLHAEFAIRAFKA--GKHVMCEKP 132 (221)
T ss_dssp ECSCGGGHHHHHHHHHHT--TCEEEECSS
T ss_pred eccchhhhhhHHHHhhhc--chhhhcCCC
Confidence 888886667888888887 555666543
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=88.50 E-value=0.95 Score=38.67 Aligned_cols=37 Identities=27% Similarity=0.252 Sum_probs=31.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 017431 186 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK 223 (371)
Q Consensus 186 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~ 223 (371)
+.++|||+|+ |.+|...+..+...|+ +|+++.++.++
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~ 39 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVHSLKG 39 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCSCS
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCC-eEEEEECCcch
Confidence 4579999988 9999999999999999 78888776554
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=88.36 E-value=0.24 Score=40.93 Aligned_cols=34 Identities=26% Similarity=0.424 Sum_probs=30.4
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEc
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID 218 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~ 218 (371)
--+|++|+|.|.|.+|..+++++...|+ +|+++.
T Consensus 33 ~l~g~~v~IQGfGnVG~~~a~~L~e~Ga-kvvavs 66 (255)
T d1bgva1 33 TLVGKTVALAGFGNVAWGAAKKLAELGA-KAVTLS 66 (255)
T ss_dssp CSTTCEEEECCSSHHHHHHHHHHHHHTC-EEEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEe
Confidence 4578999999999999999999999999 777764
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=88.33 E-value=0.23 Score=39.87 Aligned_cols=32 Identities=25% Similarity=0.307 Sum_probs=28.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
-|+|+|+|..|+.++..+...|. +|++++..+
T Consensus 7 DviViGaG~~Gl~~A~~La~~G~-~V~vlE~~~ 38 (297)
T d2bcgg1 7 DVIVLGTGITECILSGLLSVDGK-KVLHIDKQD 38 (297)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCC-CEEEEcCCC
Confidence 37889999999998888888898 899998865
|
| >d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: AD-003 protein-like domain: Adrenal gland protein AD-003 (C9orf32) species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.27 E-value=0.48 Score=37.89 Aligned_cols=96 Identities=18% Similarity=0.109 Sum_probs=62.0
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcC----CcE--EecCCCCCchHHHHHHhhc--
Q 017431 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG----VTE--FVNPKDHDKPIQQVLVDLT-- 253 (371)
Q Consensus 182 ~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g----~~~--vi~~~~~~~~~~~~~~~~~-- 253 (371)
....++.+||=+|+| .|..+..+++..+. +|++++.+++-.+.+++.. ... .+.. + +.++.
T Consensus 56 ~~~~~~~~vLDiGcG-~G~~~~~l~~~~~~-~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~-d--------~~~~~~~ 124 (222)
T d2ex4a1 56 PNKTGTSCALDCGAG-IGRITKRLLLPLFR-EVDMVDITEDFLVQAKTYLGEEGKRVRNYFCC-G--------LQDFTPE 124 (222)
T ss_dssp --CCCCSEEEEETCT-TTHHHHHTTTTTCS-EEEEEESCHHHHHHHHHHTGGGGGGEEEEEEC-C--------GGGCCCC
T ss_pred cCCCCCCEEEEeccC-CCHhhHHHHHhcCC-EEEEeecCHHHhhccccccccccccccccccc-c--------ccccccc
Confidence 345677899989886 56666677666555 8999999999888776532 211 1211 1 11222
Q ss_pred CCCccEEEEc-----cCCH---HHHHHHHHHhccCCceEEEEcc
Q 017431 254 DGGVDYSFEC-----IGNV---SVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 254 ~gg~dvvid~-----~g~~---~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
++.+|+|+.. +..+ .++..+.+.|+++ |.++....
T Consensus 125 ~~~fD~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~-G~~~i~~~ 167 (222)
T d2ex4a1 125 PDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPN-GIIVIKDN 167 (222)
T ss_dssp SSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred cccccccccccccccchhhhhhhHHHHHHHhcCCc-ceEEEEEc
Confidence 2379999863 2222 4688889999997 99887643
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=88.24 E-value=0.33 Score=40.38 Aligned_cols=35 Identities=26% Similarity=0.248 Sum_probs=26.4
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhH
Q 017431 189 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKF 224 (371)
Q Consensus 189 ~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~-~~~~~ 224 (371)
.+||+|+ +++|.+.++.+...|+ +|+.+.+ ++++.
T Consensus 4 VAlITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~ 40 (284)
T d1e7wa_ 4 VALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEA 40 (284)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCCHHHH
Confidence 3577887 8999999999889999 7776644 44433
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=88.16 E-value=0.16 Score=42.29 Aligned_cols=32 Identities=34% Similarity=0.456 Sum_probs=28.5
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
+|+|+|+|..|+.++..+...|. +|++++.++
T Consensus 2 ~V~IIGaG~aGL~aA~~L~~~G~-~V~vlE~~~ 33 (347)
T d2ivda1 2 NVAVVGGGISGLAVAHHLRSRGT-DAVLLESSA 33 (347)
T ss_dssp CEEEECCBHHHHHHHHHHHTTTC-CEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence 48999999999999999999999 899998754
|
| >d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 3 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=88.04 E-value=0.49 Score=35.59 Aligned_cols=37 Identities=27% Similarity=0.271 Sum_probs=31.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
.-+++|+|+|+|.+|.=++..+..+|++.|+.+.+.+
T Consensus 43 ~~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr~ 79 (153)
T d1gtea3 43 SIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 79 (153)
T ss_dssp CCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred cCCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeCC
Confidence 3467899999999999999999999997888886644
|
| >d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=87.80 E-value=0.24 Score=39.40 Aligned_cols=32 Identities=25% Similarity=0.236 Sum_probs=27.9
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
-|+|+|+|+.|+.++..+..+|. +|++++..+
T Consensus 5 DvvVIGgGpaGl~aA~~aa~~G~-kV~vie~~~ 36 (221)
T d1dxla1 5 DVVIIGGGPGGYVAAIKAAQLGF-KTTCIEKRG 36 (221)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTC-CEEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCC-cEEEEEecC
Confidence 47889999999999999999999 888887643
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=87.77 E-value=0.31 Score=40.94 Aligned_cols=33 Identities=27% Similarity=0.365 Sum_probs=30.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID 218 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~ 218 (371)
-+|++|+|.|.|.+|..+++++...|+ +|++++
T Consensus 34 L~gktvaIqGfGnVG~~~A~~L~e~Ga-kvv~vs 66 (293)
T d1hwxa1 34 FGDKTFAVQGFGNVGLHSMRYLHRFGA-KCVAVG 66 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEE
Confidence 468999999999999999999999999 888875
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=87.73 E-value=0.4 Score=37.88 Aligned_cols=41 Identities=37% Similarity=0.575 Sum_probs=35.2
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF 230 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~ 230 (371)
+|.|+|+|-+|+..+..+...|. +|++++.++++.+.+.+-
T Consensus 2 kI~ViGlG~vGl~~a~~la~~g~-~V~g~D~n~~~i~~ln~g 42 (202)
T d1mv8a2 2 RISIFGLGYVGAVCAGCLSARGH-EVIGVDVSSTKIDLINQG 42 (202)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT
T ss_pred EEEEECCCHhHHHHHHHHHhCCC-cEEEEeCCHHHHHHhccc
Confidence 57889999999998777778899 999999999988877653
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=87.36 E-value=0.57 Score=35.26 Aligned_cols=40 Identities=18% Similarity=0.120 Sum_probs=32.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF 224 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~ 224 (371)
++..+|.|+|+|.+|.....++...+...++.++.++++.
T Consensus 5 ~k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~ 44 (154)
T d1pzga1 5 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMP 44 (154)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHH
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccc
Confidence 4567899999999998888887888866899998887654
|
| >d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermus aquaticus [TaxId: 271]
Probab=87.35 E-value=2.3 Score=32.27 Aligned_cols=100 Identities=18% Similarity=0.185 Sum_probs=56.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHhcCCcE--------------EecCCCCCchHHHHHHhh
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFGVTE--------------FVNPKDHDKPIQQVLVDL 252 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~--~~~~~~~~g~~~--------------vi~~~~~~~~~~~~~~~~ 252 (371)
+|.|.|-|-+|.++.+++...+. .++++....+ ...++-++-..+ .++-+...-.......++
T Consensus 2 kigINGfGRIGR~~~R~l~~~~i-~iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~~i 80 (168)
T d2g82a1 2 KVGINGFGRIGRQVFRILHSRGV-EVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKEI 80 (168)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTC-CEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGGC
T ss_pred EEEEECCcHHHHHHHHHHhcCCC-EEEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEecCChHHC
Confidence 57889999999999998888888 6666643332 233332221110 010000000000001222
Q ss_pred cC-C-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 253 TD-G-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 253 ~~-g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
.. . ++|+|+||+|.-...+.+...+..+ .+=|.++.+
T Consensus 81 ~W~~~gvdiViEcTG~f~~~~~~~~hl~~g-akkViiSAP 119 (168)
T d2g82a1 81 PWAEAGVGVVIESTGVFTDADKAKAHLEGG-AKKVIITAP 119 (168)
T ss_dssp CTGGGTEEEEEECSSSCCBHHHHTHHHHTT-CSEEEESSC
T ss_pred cccccCCceeEeccccccchHHhhhhhccc-cceeeeccc
Confidence 22 2 8999999999855567777788875 666666543
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=87.31 E-value=1.8 Score=31.21 Aligned_cols=71 Identities=14% Similarity=0.268 Sum_probs=44.6
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCH
Q 017431 189 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 267 (371)
Q Consensus 189 ~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~ 267 (371)
+|.|+|+ |-+|.+..+++...+.+-+..++.+.. ..+ ..+|+++|.+...
T Consensus 2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~-----------~~~------------------~~~DVvIDFS~p~ 52 (128)
T d1vm6a3 2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV-----------EEL------------------DSPDVVIDFSSPE 52 (128)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEE-----------EEC------------------SCCSEEEECSCGG
T ss_pred EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcH-----------HHh------------------ccCCEEEEecCHH
Confidence 5889998 999999999999988843333432211 000 1478999987775
Q ss_pred HHHHHHHHHhccCCceEEEEccC
Q 017431 268 SVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 268 ~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
.+.+.+-.++.. +.=+.+|.+
T Consensus 53 ~~~~~l~~~~~~--~~p~ViGTT 73 (128)
T d1vm6a3 53 ALPKTVDLCKKY--RAGLVLGTT 73 (128)
T ss_dssp GHHHHHHHHHHH--TCEEEECCC
T ss_pred HHHHHHHHHHhc--CCCEEEEcC
Confidence 544444444444 454556664
|
| >d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains species: Escherichia coli [TaxId: 562]
Probab=87.29 E-value=0.26 Score=37.97 Aligned_cols=30 Identities=27% Similarity=0.199 Sum_probs=26.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDI 219 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~ 219 (371)
.|+|+|+|+.|+.|...+...|. +|+.++.
T Consensus 3 DViIIGgGpaGl~AAi~aar~G~-~v~iie~ 32 (184)
T d1fl2a1 3 DVLIVGSGPAGAAAAIYSARKGI-RTGLMGE 32 (184)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTC-CEEEECS
T ss_pred cEEEECcCHHHHHHHHHHHHcCC-eEEEEEE
Confidence 48899999999999999999999 7888864
|
| >d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Histamine methyltransferase domain: Histamine methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.20 E-value=0.77 Score=38.02 Aligned_cols=106 Identities=8% Similarity=0.019 Sum_probs=57.0
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHc-----CCC-eEEEEcCChhhHHHHHhcCC-----c-EEecCCCC-CchHHHH
Q 017431 182 AKVEPGSIVAVFGLGTVGLAVAEGAKAA-----GAS-RVIGIDIDPKKFDRAKNFGV-----T-EFVNPKDH-DKPIQQV 248 (371)
Q Consensus 182 ~~~~~g~~VlI~Gag~vG~~ai~la~~~-----g~~-~v~~v~~~~~~~~~~~~~g~-----~-~vi~~~~~-~~~~~~~ 248 (371)
...+++-+||=+|+| .|..+..+++.+ +.. .+++++.++.-.+.+++.-. . ..++.... ...+...
T Consensus 36 ~~~~~~~~VLDiGcG-~G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (280)
T d1jqea_ 36 GDTKSEIKILSIGGG-AGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHKETSSEYQSR 114 (280)
T ss_dssp TTTCSEEEEEEETCT-TSHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEECSCHHHHHHH
T ss_pred ccCCCCCeEEEEcCC-CCHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchhhhhhhhcch
Confidence 334555578888874 233333333321 221 57889998887776654211 1 11111110 0112222
Q ss_pred HHhhc-CCCccEEEEccC-----C-HHHHHHHHHHhccCCceEEEEcc
Q 017431 249 LVDLT-DGGVDYSFECIG-----N-VSVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 249 ~~~~~-~gg~dvvid~~g-----~-~~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
..... ++.||+|+..-. . ..+++.+.++|+++ |.++....
T Consensus 115 ~~~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~Lkpg-G~l~i~~~ 161 (280)
T d1jqea_ 115 MLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTN-AKMLIIVV 161 (280)
T ss_dssp HTTSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred hcccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCC-CEEEEEEe
Confidence 22222 238999986322 2 35789999999997 98876643
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=87.19 E-value=0.38 Score=36.28 Aligned_cols=92 Identities=17% Similarity=0.106 Sum_probs=55.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCC--CeEEEEcCChhhHHHHHhcCCcE-EecCCCCCchHHHHHHhhcCCCccEEEE
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGA--SRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTDGGVDYSFE 262 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~--~~v~~v~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~~~~~~~~gg~dvvid 262 (371)
|-+|.|+|| |.+|.-.++++..... ..+..+.++...-+......... .....+ . .....|+++-
T Consensus 1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~~~~~~~~~~~~~~--~---------~~~~~d~~f~ 69 (154)
T d2gz1a1 1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTE--T---------AFEGVDIALF 69 (154)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEEEETTEEEEEEECCT--T---------TTTTCSEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEecccccccccccccCCcccccccch--h---------hhhhhhhhhh
Confidence 457999999 9999999999987742 24444443322111111111111 111111 1 1126899999
Q ss_pred ccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 263 CIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 263 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+.+...+.+...+....+ .++|+.+..
T Consensus 70 ~~~~~~s~~~~~~~~~~~-~~VIDlSsd 96 (154)
T d2gz1a1 70 SAGSSTSAKYAPYAVKAG-VVVVDNTSY 96 (154)
T ss_dssp CSCHHHHHHHHHHHHHTT-CEEEECSST
T ss_pred ccCccchhhHHhhhcccc-ceehhcChh
Confidence 999877777777777886 888888764
|
| >d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=87.15 E-value=0.31 Score=41.24 Aligned_cols=34 Identities=26% Similarity=0.218 Sum_probs=29.4
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
-.|+|+|||..|++++..++..|. .|++++..++
T Consensus 8 ~dV~IIGAG~sGl~~a~~L~~~G~-~v~i~Ek~~~ 41 (298)
T d1w4xa1 8 VDVLVVGAGFSGLYALYRLRELGR-SVHVIETAGD 41 (298)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred CCEEEECccHHHHHHHHHHHhCCC-CEEEEEcCCC
Confidence 358899999999999999999999 7888987654
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=86.85 E-value=3.5 Score=29.32 Aligned_cols=91 Identities=11% Similarity=0.016 Sum_probs=59.7
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCCHH
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 268 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~~~ 268 (371)
.|+|.|.|.+|...++.++ +. .+++++.++++.+.++..|...+. -+. .-.+.+++..-..++.++-++....
T Consensus 2 HivI~G~g~~g~~l~~~L~--~~-~i~vi~~d~~~~~~~~~~~~~~i~-Gd~---~~~~~L~~a~i~~A~~vi~~~~~d~ 74 (129)
T d2fy8a1 2 HVVICGWSESTLECLRELR--GS-EVFVLAEDENVRKKVLRSGANFVH-GDP---TRVSDLEKANVRGARAVIVNLESDS 74 (129)
T ss_dssp CEEEESCCHHHHHHHHTSC--GG-GEEEEESCTTHHHHHHHTTCEEEE-SCT---TSHHHHHHTTCTTCSEEEECCSSHH
T ss_pred EEEEECCCHHHHHHHHHHc--CC-CCEEEEcchHHHHHHHhcCccccc-ccc---CCHHHHHHhhhhcCcEEEEeccchh
Confidence 5788899999998877664 44 677888889888888888875443 221 1234455543337999998887743
Q ss_pred H---HHHHHHHhccCCceEEEE
Q 017431 269 V---MRAALECCHKGWGTSVIV 287 (371)
Q Consensus 269 ~---~~~~~~~l~~~~G~iv~~ 287 (371)
. +-...+.+.+. .+++..
T Consensus 75 ~n~~~~~~~r~~~~~-~~iia~ 95 (129)
T d2fy8a1 75 ETIHCILGIRKIDES-VRIIAE 95 (129)
T ss_dssp HHHHHHHHHHHHCSS-SCEEEE
T ss_pred hhHHHHHHHHHHCCC-ceEEEE
Confidence 2 33444556664 666554
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=86.71 E-value=0.39 Score=39.25 Aligned_cols=36 Identities=31% Similarity=0.449 Sum_probs=31.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
...+|+|+|+|++|-.++..+..+|.++++.+|.+.
T Consensus 29 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~ 64 (247)
T d1jw9b_ 29 KDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 64 (247)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCcc
Confidence 347999999999999999999999999999997544
|
| >d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Putative methyltransferase SPy1538 species: Streptococcus pyogenes [TaxId: 1314]
Probab=86.65 E-value=1.7 Score=32.29 Aligned_cols=68 Identities=13% Similarity=0.120 Sum_probs=42.5
Q ss_pred CCCCEEEEEc--CChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCcE---EecCCCCCchHHHHHHhhcCC
Q 017431 185 EPGSIVAVFG--LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE---FVNPKDHDKPIQQVLVDLTDG 255 (371)
Q Consensus 185 ~~g~~VlI~G--ag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~----~~g~~~---vi~~~~~~~~~~~~~~~~~~g 255 (371)
-+|.+||=++ +|.+|+.| ...|+++|+.++.+++..+.++ .++... ++. .+....+. ...+
T Consensus 13 ~~g~~vlDl~~GtG~~~iea----~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~-----~D~~~~l~-~~~~ 82 (152)
T d2esra1 13 FNGGRVLDLFAGSGGLAIEA----VSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLK-----MEAERAID-CLTG 82 (152)
T ss_dssp CCSCEEEEETCTTCHHHHHH----HHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEEC-----SCHHHHHH-HBCS
T ss_pred CCCCeEEEcCCccCHHHHHH----HHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhc-----cccccccc-cccc
Confidence 3678887774 46666643 3468889999999988766554 355532 232 23333343 3344
Q ss_pred CccEEEE
Q 017431 256 GVDYSFE 262 (371)
Q Consensus 256 g~dvvid 262 (371)
.||+||-
T Consensus 83 ~fDiIf~ 89 (152)
T d2esra1 83 RFDLVFL 89 (152)
T ss_dssp CEEEEEE
T ss_pred ccceeEe
Confidence 8998884
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=86.36 E-value=1 Score=34.37 Aligned_cols=43 Identities=23% Similarity=0.239 Sum_probs=35.9
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 232 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~ 232 (371)
+|-|+|.|.+|...+.-+...|+ .|++.++++++.+.+.+.+.
T Consensus 3 kIGvIGlG~MG~~ma~~L~~~G~-~V~~~dr~~~~~~~l~~~~~ 45 (178)
T d1pgja2 3 DVGVVGLGVMGANLALNIAEKGF-KVAVFNRTYSKSEEFMKANA 45 (178)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTT
T ss_pred EEEEEeehHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCC
Confidence 37788999999998888888899 89999999999887765443
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=86.34 E-value=0.31 Score=37.40 Aligned_cols=27 Identities=33% Similarity=0.506 Sum_probs=24.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCC
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGAS 212 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~ 212 (371)
++++|+|+|+|.+|+-++..++.+|++
T Consensus 2 ~~~~VvIIGgG~~G~e~A~~l~~~g~~ 28 (185)
T d1q1ra1 2 ANDNVVIVGTGLAGVEVAFGLRASGWE 28 (185)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHcCCc
Confidence 578999999999999999999999984
|
| >d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: AD-003 protein-like domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810) species: Leishmania major [TaxId: 5664]
Probab=86.10 E-value=1.4 Score=36.03 Aligned_cols=101 Identities=10% Similarity=-0.081 Sum_probs=64.7
Q ss_pred hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcC-CcEEecCCCCCchHHHHHHhhc--CCC
Q 017431 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG-VTEFVNPKDHDKPIQQVLVDLT--DGG 256 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g-~~~vi~~~~~~~~~~~~~~~~~--~gg 256 (371)
......++.+||=+|+| .|..+..++..... .|++++.+++-.+.+++.- ....+.... .+ +.+.. ++.
T Consensus 87 ~~l~~~~~~~vLD~GcG-~G~~t~~ll~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~~~--~d----~~~~~~~~~~ 158 (254)
T d1xtpa_ 87 ASLPGHGTSRALDCGAG-IGRITKNLLTKLYA-TTDLLEPVKHMLEEAKRELAGMPVGKFIL--AS----METATLPPNT 158 (254)
T ss_dssp HTSTTCCCSEEEEETCT-TTHHHHHTHHHHCS-EEEEEESCHHHHHHHHHHTTTSSEEEEEE--SC----GGGCCCCSSC
T ss_pred hhCCCCCCCeEEEeccc-CChhhHHHHhhcCc-eEEEEcCCHHHHHhhhccccccccceeEE--cc----ccccccCCCc
Confidence 44555677888888886 47777777776555 8999999999888887532 211111111 11 12222 237
Q ss_pred ccEEEEccC-----CH---HHHHHHHHHhccCCceEEEEcc
Q 017431 257 VDYSFECIG-----NV---SVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 257 ~dvvid~~g-----~~---~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
||+|+..-. .+ ..++.+.+.|+++ |.++....
T Consensus 159 fD~I~~~~vl~hl~d~d~~~~l~~~~~~Lkpg-G~iii~e~ 198 (254)
T d1xtpa_ 159 YDLIVIQWTAIYLTDADFVKFFKHCQQALTPN-GYIFFKEN 198 (254)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred cceEEeeccccccchhhhHHHHHHHHHhcCCC-cEEEEEec
Confidence 999986332 12 3478888999997 99887543
|
| >d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=86.06 E-value=0.31 Score=38.71 Aligned_cols=31 Identities=23% Similarity=0.235 Sum_probs=27.5
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 220 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~ 220 (371)
-|+|+|+|+.|+.|+..|..+|. +|++++..
T Consensus 4 DvvVIG~G~aG~~aA~~a~~~G~-kV~iiE~~ 34 (217)
T d1gesa1 4 DYIAIGGGSGGIASINRAAMYGQ-KCALIEAK 34 (217)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTC-CEEEEESS
T ss_pred CEEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence 37889999999999999999999 89998764
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=85.95 E-value=0.29 Score=40.68 Aligned_cols=35 Identities=20% Similarity=0.264 Sum_probs=30.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 187 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 187 g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
-++|||+|+ |-+|...+..+...|. +|++++++..
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~G~-~V~~l~R~~~ 38 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDLGH-PTFLLVREST 38 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEECCCc
Confidence 368999998 9999999999999999 8898887654
|
| >d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=85.78 E-value=0.36 Score=38.47 Aligned_cols=31 Identities=19% Similarity=0.227 Sum_probs=27.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 220 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~ 220 (371)
.|+|+|+|+.|+.+...|..+|. +|++++..
T Consensus 7 DlvVIG~GpaGl~aA~~aa~~G~-~V~liE~~ 37 (220)
T d1lvla1 7 TLLIIGGGPGGYVAAIRAGQLGI-PTVLVEGQ 37 (220)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTC-CEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCC-cEEEEecC
Confidence 47888999999999999999999 89999764
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=85.74 E-value=0.36 Score=35.97 Aligned_cols=92 Identities=17% Similarity=0.068 Sum_probs=53.0
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcC--CCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAG--ASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g--~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
-+|.|+|| |.+|+-.++++...+ ..++..+.++...-+.+...+ .... ..+ +......+.|++|-+.
T Consensus 3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~~-~~~~-~~~--------~~~~~~~~~d~vf~a~ 72 (144)
T d2hjsa1 3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAE-SSLR-VGD--------VDSFDFSSVGLAFFAA 72 (144)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETT-EEEE-CEE--------GGGCCGGGCSEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeecc-ccch-hcc--------chhhhhccceEEEecC
Confidence 36889999 999999999996543 225665544433211111111 1110 000 0011112799999999
Q ss_pred CCHHHHHHHHHHhccCCceEEEEccC
Q 017431 265 GNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 265 g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
++.......-+....+ .++++.+..
T Consensus 73 p~~~s~~~~~~~~~~g-~~VID~Ss~ 97 (144)
T d2hjsa1 73 AAEVSRAHAERARAAG-CSVIDLSGA 97 (144)
T ss_dssp CHHHHHHHHHHHHHTT-CEEEETTCT
T ss_pred CcchhhhhccccccCC-ceEEeechh
Confidence 9876666666666775 777776553
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=85.68 E-value=0.31 Score=41.18 Aligned_cols=33 Identities=21% Similarity=0.258 Sum_probs=28.7
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
.|+|+|||..|+.++..+...|. +|.+++.++.
T Consensus 3 dv~IIGaG~sGl~~A~~L~~~g~-~V~iiEk~~~ 35 (298)
T d1i8ta1 3 DYIIVGSGLFGAVCANELKKLNK-KVLVIEKRNH 35 (298)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTC-CEEEECSSSS
T ss_pred cEEEECCcHHHHHHHHHHHhCCC-cEEEEECCCC
Confidence 48899999999999999988898 8999987653
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=85.57 E-value=0.57 Score=36.67 Aligned_cols=39 Identities=36% Similarity=0.436 Sum_probs=32.5
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 229 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~ 229 (371)
+|.|+|.|-+|+..+.++ +.|. +|+++|.++++.+.+++
T Consensus 2 kI~ViGlG~vGl~~a~~~-a~g~-~V~g~Din~~~v~~l~~ 40 (196)
T d1dlja2 2 KIAVAGSGYVGLSLGVLL-SLQN-EVTIVDILPSKVDKINN 40 (196)
T ss_dssp EEEEECCSHHHHHHHHHH-TTTS-EEEEECSCHHHHHHHHT
T ss_pred EEEEECCChhHHHHHHHH-HCCC-cEEEEECCHHHHHHHhh
Confidence 578889999999876555 5798 99999999998887764
|
| >d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=85.57 E-value=2.6 Score=35.52 Aligned_cols=108 Identities=19% Similarity=0.171 Sum_probs=67.1
Q ss_pred hcCCCCCCCEEEEE-cCChHHHHHHHHHHHcCCCeEEEE--cCChhhHHHHHhcCCcEEecCCC----------------
Q 017431 180 NTAKVEPGSIVAVF-GLGTVGLAVAEGAKAAGASRVIGI--DIDPKKFDRAKNFGVTEFVNPKD---------------- 240 (371)
Q Consensus 180 ~~~~~~~g~~VlI~-Gag~vG~~ai~la~~~g~~~v~~v--~~~~~~~~~~~~~g~~~vi~~~~---------------- 240 (371)
+.+.++++...+|. .+|..|++....|+.+|.+-++++ ..++.|.+.++.+|+.-++....
T Consensus 57 ~~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~~~Ga~vi~~~~~~~~~~~~~~~~~~~~~ 136 (320)
T d1z7wa1 57 KKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAK 136 (320)
T ss_dssp HTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHH
T ss_pred HcCCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhhccCcceEEeeccccccccchhHHHHHHh
Confidence 45556666565565 569999999999999998433333 33456788888999854422110
Q ss_pred ---------C--C-------chHHHHHHhhcCCCccEEEEccCCHHHHH---HHHHHhccCCceEEEEc
Q 017431 241 ---------H--D-------KPIQQVLVDLTDGGVDYSFECIGNVSVMR---AALECCHKGWGTSVIVG 288 (371)
Q Consensus 241 ---------~--~-------~~~~~~~~~~~~gg~dvvid~~g~~~~~~---~~~~~l~~~~G~iv~~g 288 (371)
. + .....++.+...+.+|.++-++|+..++. ..++...+. -+++.+.
T Consensus 137 ~~~~~~~~~~~~~~n~~~g~~t~~~EI~~q~~~~~D~vv~~vGgGg~~~Gi~~~~k~~~~~-~~~igve 204 (320)
T d1z7wa1 137 TPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNAN-VKLYGVE 204 (320)
T ss_dssp CTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEEE
T ss_pred CCCceecccccccchHHHhhhhHHHHHHHhccCCCCEEEeCCCCCcccchhhhhhhhhhcc-eeeeccc
Confidence 0 0 11223445555557899999888865543 444445564 6776664
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=85.25 E-value=2.4 Score=30.40 Aligned_cols=88 Identities=16% Similarity=0.294 Sum_probs=52.6
Q ss_pred CCCEEEEEcCCh--HH---------HHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEec-CCCCCchHHHHHHhhc
Q 017431 186 PGSIVAVFGLGT--VG---------LAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN-PKDHDKPIQQVLVDLT 253 (371)
Q Consensus 186 ~g~~VlI~Gag~--vG---------~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~-~~~~~~~~~~~~~~~~ 253 (371)
.-++|||+|+|+ +| .-|+.-+|..|+ +++.+.++++....-..+ +++++- +-+ ......+.+.
T Consensus 6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~-~~iliN~NP~TVstd~d~-aD~lYfePlt--~e~v~~Ii~~- 80 (127)
T d1a9xa3 6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGY-RVINVNSNPATIMTDPEM-ADATYIEPIH--WEVVRKIIEK- 80 (127)
T ss_dssp SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTC-EEEEECSCTTCGGGCGGG-SSEEECSCCC--HHHHHHHHHH-
T ss_pred CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCC-eEEEecCchHhhhcChhh-cceeeeecCC--HHHHHHHHHH-
Confidence 347999999875 33 445556667799 899998988864332222 344432 222 2332223222
Q ss_pred CCCccEEEEccCCHHHHHHHHHHhcc
Q 017431 254 DGGVDYSFECIGNVSVMRAALECCHK 279 (371)
Q Consensus 254 ~gg~dvvid~~g~~~~~~~~~~~l~~ 279 (371)
.+.|-++-+.|+.-.++.+.++...
T Consensus 81 -E~pd~il~~~GGQtalnla~~L~~~ 105 (127)
T d1a9xa3 81 -ERPDAVLPTMGGQTALNCALELERQ 105 (127)
T ss_dssp -HCCSEEECSSSHHHHHHHHHHHHHT
T ss_pred -hCcCCeEEEeeeehHhHHHHHHHHc
Confidence 2688888888885556666665433
|
| >d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=85.25 E-value=0.43 Score=37.80 Aligned_cols=30 Identities=27% Similarity=0.317 Sum_probs=26.8
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017431 190 VAVFGLGTVGLAVAEGAKAAGASRVIGIDID 220 (371)
Q Consensus 190 VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~ 220 (371)
|+|+|+|+.|+.|+..|..+|. +|++++..
T Consensus 6 viVIG~GpaGl~aA~~aar~G~-kV~vIEk~ 35 (223)
T d1ebda1 6 TLVVGAGPGGYVAAIRAAQLGQ-KVTIVEKG 35 (223)
T ss_dssp EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred EEEECCCHHHHHHHHHHHHCCC-EEEEEecC
Confidence 7788999999999999999999 88888754
|
| >d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Thi4-like domain: Thiazole biosynthetic enzyme Thi4 species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]
Probab=85.25 E-value=0.26 Score=41.04 Aligned_cols=34 Identities=32% Similarity=0.390 Sum_probs=27.3
Q ss_pred CEEEEEcCChHHHHHH-HHHHHcCCCeEEEEcCChh
Q 017431 188 SIVAVFGLGTVGLAVA-EGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai-~la~~~g~~~v~~v~~~~~ 222 (371)
..|+|+|+|+.|++++ .+|+..|. +|++++..++
T Consensus 34 ~DViVIGaGpaGL~aA~~LA~~~G~-~V~vlE~~~~ 68 (278)
T d1rp0a1 34 TDVVVVGAGSAGLSAAYEISKNPNV-QVAIIEQSVS 68 (278)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTS-CEEEEESSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHccCC-eEEEEecCCC
Confidence 4599999999999765 45676799 9999987653
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.18 E-value=0.37 Score=40.98 Aligned_cols=31 Identities=29% Similarity=0.411 Sum_probs=27.5
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 190 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 190 VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
|+|+|||..|++++..++..|. +|++++..+
T Consensus 2 ViVIGaG~aGL~aA~~L~~~G~-~V~VlE~~~ 32 (383)
T d2v5za1 2 VVVVGGGISGMAAAKLLHDSGL-NVVVLEARD 32 (383)
T ss_dssp EEEECCBHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred EEEECCCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence 7889999999999999999999 899997654
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=85.17 E-value=0.42 Score=39.31 Aligned_cols=32 Identities=19% Similarity=0.149 Sum_probs=27.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
.|+|+|+|.+|++++..+...|. +|+++++.+
T Consensus 6 DvvIIGaGi~Gls~A~~La~~G~-~V~vlE~~~ 37 (276)
T d1ryia1 6 EAVVIGGGIIGSAIAYYLAKENK-NTALFESGT 37 (276)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence 48999999999998777777898 899998754
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=85.03 E-value=0.99 Score=33.72 Aligned_cols=39 Identities=21% Similarity=0.225 Sum_probs=32.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF 224 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~ 224 (371)
|..+|-|+|+|.+|.....++...+...++.++.++++.
T Consensus 2 p~~KI~IIGaG~VG~~~a~~l~~~~l~el~L~Di~~~~~ 40 (150)
T d1t2da1 2 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMP 40 (150)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEeccCCcc
Confidence 456899999999999888888888888999999877653
|
| >d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Salmonella typhimurium [TaxId: 90371]
Probab=84.98 E-value=3.7 Score=33.98 Aligned_cols=99 Identities=18% Similarity=0.221 Sum_probs=63.1
Q ss_pred hcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEc--CChhhHHHHHhcCCcEEecCCC-----------------
Q 017431 180 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID--IDPKKFDRAKNFGVTEFVNPKD----------------- 240 (371)
Q Consensus 180 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~--~~~~~~~~~~~~g~~~vi~~~~----------------- 240 (371)
+...++++.+|+..++|.-|.++...|+.+|.+-++.+. .++.+.+.++.+|+.-+.....
T Consensus 54 ~~g~~~~~~~vv~assGn~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~ga~v~~~~~~~~~~~~~~~~~~~~~~~ 133 (302)
T d1fcja_ 54 KRGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASD 133 (302)
T ss_dssp HHTCCCTTCEEEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHTS
T ss_pred HcCCCCCCceEEEeccccchhHHHHHHHHhccCCceEEeecCcHHHHHHHHHhccceEEeccccccchhhhHHHHHHhhh
Confidence 445667777766667799999999999999985444443 3445667777888754321100
Q ss_pred ---------C-C--------chHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhc
Q 017431 241 ---------H-D--------KPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH 278 (371)
Q Consensus 241 ---------~-~--------~~~~~~~~~~~~gg~dvvid~~g~~~~~~~~~~~l~ 278 (371)
. + .....++.+..++.+|.++-++|+..++.-....++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~ti~~Ei~e~~~~~~d~vv~~vG~GG~~~Gi~~~lk 189 (302)
T d1fcja_ 134 PQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIK 189 (302)
T ss_dssp TTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHH
T ss_pred ccceeccccccccchhHHHHhHHHHHHHHhcCCCCCEEEEcCCCccccccceeeee
Confidence 0 0 123344555555578999999998665555555443
|
| >d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=84.93 E-value=0.45 Score=37.97 Aligned_cols=32 Identities=22% Similarity=0.235 Sum_probs=27.3
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
-|+|+|+|+.|+.|...|..+|. +|++++..+
T Consensus 7 DviVIG~GpAGl~aA~~aa~~G~-kV~lie~~~ 38 (233)
T d1v59a1 7 DVVIIGGGPAGYVAAIKAAQLGF-NTACVEKRG 38 (233)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCC-cEEEEEecC
Confidence 47889999999998888888999 888887654
|
| >d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein ECA1738 species: Erwinia carotovora [TaxId: 554]
Probab=84.88 E-value=0.4 Score=38.47 Aligned_cols=92 Identities=9% Similarity=0.038 Sum_probs=56.2
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE--EecCCCCCchHHHHHHhhc-CCCccE
Q 017431 183 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--FVNPKDHDKPIQQVLVDLT-DGGVDY 259 (371)
Q Consensus 183 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~--vi~~~~~~~~~~~~~~~~~-~gg~dv 259 (371)
+.-++.+||=+|+| .|..+..+++ .|. +|++++.+++..+.+++..... ++. .+ + .... ++.||+
T Consensus 17 ~~~~~~~VLDiGcG-~G~~~~~l~~-~g~-~v~giD~s~~~i~~a~~~~~~~~~~~~-~~----~----~~~~~~~~fD~ 84 (225)
T d2p7ia1 17 PFFRPGNLLELGSF-KGDFTSRLQE-HFN-DITCVEASEEAISHAQGRLKDGITYIH-SR----F----EDAQLPRRYDN 84 (225)
T ss_dssp GGCCSSCEEEESCT-TSHHHHHHTT-TCS-CEEEEESCHHHHHHHHHHSCSCEEEEE-SC----G----GGCCCSSCEEE
T ss_pred hhCCCCcEEEEeCC-CcHHHHHHHH-cCC-eEEEEeCcHHHhhhhhccccccccccc-cc----c----ccccccccccc
Confidence 34456788888885 3555556654 477 8999999999888887643322 221 11 1 1112 237999
Q ss_pred EEEcc-----CCH-HHHHHHH-HHhccCCceEEEE
Q 017431 260 SFECI-----GNV-SVMRAAL-ECCHKGWGTSVIV 287 (371)
Q Consensus 260 vid~~-----g~~-~~~~~~~-~~l~~~~G~iv~~ 287 (371)
|+..- ..+ ..+..+. ++|+++ |.++..
T Consensus 85 I~~~~vleh~~d~~~~l~~i~~~~Lk~g-G~l~i~ 118 (225)
T d2p7ia1 85 IVLTHVLEHIDDPVALLKRINDDWLAEG-GRLFLV 118 (225)
T ss_dssp EEEESCGGGCSSHHHHHHHHHHTTEEEE-EEEEEE
T ss_pred ccccceeEecCCHHHHHHHHHHHhcCCC-ceEEEE
Confidence 98521 222 3355565 578896 887754
|
| >d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: mRNA cap (Guanine N-7) methyltransferase domain: mRNA cap (Guanine N-7) methyltransferase species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]
Probab=84.77 E-value=1.1 Score=36.28 Aligned_cols=94 Identities=17% Similarity=0.205 Sum_probs=58.3
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCc-EE-ecCCCCCchHHHHHHh-h-cCC
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT-EF-VNPKDHDKPIQQVLVD-L-TDG 255 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~-~v-i~~~~~~~~~~~~~~~-~-~~g 255 (371)
.+++++||=+|+|. |..+..+++. |...|++++.+++..+.+++ .+.. .+ +...+ .... . .++
T Consensus 22 ~~~~~~VLDlGCG~-G~~~~~~~~~-~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D-------~~~~~~~~~~ 92 (252)
T d1ri5a_ 22 TKRGDSVLDLGCGK-GGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQD-------SYGRHMDLGK 92 (252)
T ss_dssp CCTTCEEEEETCTT-TTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESC-------TTTSCCCCSS
T ss_pred CCCcCEEEEecccC-cHHHHHHHHc-CCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcc-------hhhhcccccc
Confidence 56889999998864 5556677765 54489999999998777753 3321 11 11111 0001 1 123
Q ss_pred CccEEEEccCC------H----HHHHHHHHHhccCCceEEEE
Q 017431 256 GVDYSFECIGN------V----SVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 256 g~dvvid~~g~------~----~~~~~~~~~l~~~~G~iv~~ 287 (371)
.||+|+....- . ..+..+.+.|+++ |.++..
T Consensus 93 ~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~g-G~~i~~ 133 (252)
T d1ri5a_ 93 EFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPG-GYFIMT 133 (252)
T ss_dssp CEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEE-EEEEEE
T ss_pred cceEEEEcceeeecCCCHHHHHHHHHHHhceeCCC-CEEEEE
Confidence 79999864322 1 3466777889997 998753
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=84.60 E-value=1.8 Score=35.50 Aligned_cols=72 Identities=14% Similarity=0.236 Sum_probs=43.0
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC--hhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCC-CccEEEEccC
Q 017431 190 VAVFGL-GTVGLAVAEGAKAAGASRVIGIDID--PKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG 265 (371)
Q Consensus 190 VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~--~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g 265 (371)
|||+|+ |-+|...+..+...|..+|++++.- ..+.....++......+. .+....+.....- ..++++.+.+
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~aa 77 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDK----EDFLIQIMAGEEFGDVEAIFHEGA 77 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSCCSEEEEH----HHHHHHHHTTCCCSSCCEEEECCS
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccccchhhhccc----hHHHHHHhhhhcccchhhhhhhcc
Confidence 799987 8999998888888897578888632 233334444444333322 2233333332223 6788887654
|
| >d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=84.48 E-value=0.49 Score=37.91 Aligned_cols=32 Identities=28% Similarity=0.266 Sum_probs=28.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
-|+|+|+|+.|+.|...+...|. +|++++..+
T Consensus 8 DviIIG~GPaGlsaA~~aa~~G~-~V~viE~~~ 39 (229)
T d1ojta1 8 DVVVLGGGPGGYSAAFAAADEGL-KVAIVERYK 39 (229)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCC-eEEEEeccC
Confidence 47888999999999999999999 899997654
|
| >d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Phenol hydroxylase species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]
Probab=84.36 E-value=0.36 Score=41.25 Aligned_cols=32 Identities=28% Similarity=0.296 Sum_probs=25.5
Q ss_pred EEEEEcCChHHHHHHHHH-----HHcCCCeEEEEcCCh
Q 017431 189 IVAVFGLGTVGLAVAEGA-----KAAGASRVIGIDIDP 221 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la-----~~~g~~~v~~v~~~~ 221 (371)
-|+|+|+|++|++++.++ +..|. +|+++++.+
T Consensus 9 DV~IvGaG~aGl~lA~~La~~~~~~~G~-~v~vlEr~~ 45 (360)
T d1pn0a1 9 DVLIVGAGPAGLMAARVLSEYVRQKPDL-KVRIIDKRS 45 (360)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHSTTC-CEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHhcccccCCC-cEEEEcCCC
Confidence 489999999999877665 34688 899998754
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=84.22 E-value=1.2 Score=32.09 Aligned_cols=61 Identities=23% Similarity=0.244 Sum_probs=48.3
Q ss_pred hhcCCCCCCCEEEEE-cCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCC
Q 017431 179 WNTAKVEPGSIVAVF-GLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 239 (371)
Q Consensus 179 ~~~~~~~~g~~VlI~-Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~ 239 (371)
....++..-+.+++. ..-..-+.+.++++.+|..++++...+++..+.++++|++.++++.
T Consensus 58 l~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~~~G~d~vi~p~ 119 (132)
T d1lssa_ 58 LEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFERLGVDVVVSPE 119 (132)
T ss_dssp HHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHHHTTCSEEECHH
T ss_pred hhhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHHHCCCCEEECHH
Confidence 456677776766664 4445667888999999998999988888888999999999988653
|
| >d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TrmB-like domain: tRNA (guanine-N(7)-)-methyltransferase TrmB species: Bacillus subtilis [TaxId: 1423]
Probab=84.09 E-value=5.4 Score=31.07 Aligned_cols=105 Identities=18% Similarity=0.182 Sum_probs=64.8
Q ss_pred hhhhhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCcEE-ecCCCCCchHHH
Q 017431 173 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF-VNPKDHDKPIQQ 247 (371)
Q Consensus 173 ta~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~~v-i~~~~~~~~~~~ 247 (371)
.-|.+++.. ++..||=+|+| .|..++.+|+..--..+++++.++.....+ ++.+...+ +...+ ...
T Consensus 20 ~~w~~~F~~----~~PlvLeIGcG-~G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~D----a~~ 90 (204)
T d2fcaa1 20 GKWNTVFGN----DNPIHIEVGTG-KGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNID----ADT 90 (204)
T ss_dssp TCHHHHHTS----CCCEEEEECCT-TSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCC----GGG
T ss_pred hHHHHHcCC----CCceEEEEEec-CcHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhcccc----hhh
Confidence 345555543 22344556876 688888899987433899999988766544 45666543 21222 112
Q ss_pred HHHhhcCCCccEEEEccCC--------------HHHHHHHHHHhccCCceEEEE
Q 017431 248 VLVDLTDGGVDYSFECIGN--------------VSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 248 ~~~~~~~gg~dvvid~~g~--------------~~~~~~~~~~l~~~~G~iv~~ 287 (371)
......++.+|.|+-.... +..++.+.+.|++| |.+...
T Consensus 91 l~~~~~~~~~d~v~i~fp~P~~k~~h~k~Rl~~~~~l~~~~r~Lkpg-G~l~i~ 143 (204)
T d2fcaa1 91 LTDVFEPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKG-GSIHFK 143 (204)
T ss_dssp HHHHCCTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTS-CEEEEE
T ss_pred hhcccCchhhhccccccccccchhhhcchhhhHHHHHHHHHHhCCCC-cEEEEE
Confidence 2222333478877754333 35789999999997 998766
|
| >d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TRM1-like domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=83.92 E-value=2.1 Score=37.08 Aligned_cols=92 Identities=14% Similarity=0.173 Sum_probs=59.4
Q ss_pred cCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCcEE--------ecCCC----CCchHHHHHHhhcCCCc
Q 017431 194 GLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEF--------VNPKD----HDKPIQQVLVDLTDGGV 257 (371)
Q Consensus 194 Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~----~g~~~v--------i~~~~----~~~~~~~~~~~~~~gg~ 257 (371)
+-++.|.-++.+|+..|++.|++.+.+++..+++++ .+.... ..... ...+....+ ...+..|
T Consensus 52 ~~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~Da~~~~-~~~~~~f 130 (375)
T d2dula1 52 ALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLM-AERHRYF 130 (375)
T ss_dssp SSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHH-HHSTTCE
T ss_pred cCCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeehhhhhhhh-HhhcCcC
Confidence 447789999999999999899999999998887764 222110 00000 001222222 2223379
Q ss_pred cEE-EEccCC-HHHHHHHHHHhccCCceEEEE
Q 017431 258 DYS-FECIGN-VSVMRAALECCHKGWGTSVIV 287 (371)
Q Consensus 258 dvv-id~~g~-~~~~~~~~~~l~~~~G~iv~~ 287 (371)
|+| +|..|+ ...+..++++++.+ |-+..-
T Consensus 131 DvIDiDPfGs~~pfldsAi~a~~~~-Gll~vT 161 (375)
T d2dula1 131 HFIDLDPFGSPMEFLDTALRSAKRR-GILGVT 161 (375)
T ss_dssp EEEEECCSSCCHHHHHHHHHHEEEE-EEEEEE
T ss_pred CcccCCCCCCcHHHHHHHHHHhccC-CEEEEE
Confidence 955 588888 45689999999985 776544
|
| >d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=83.76 E-value=0.52 Score=36.67 Aligned_cols=32 Identities=16% Similarity=0.065 Sum_probs=27.4
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 220 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~ 220 (371)
.+|+|+|+|+.|+.|+..+...|. ++++++..
T Consensus 6 ~~VvIIGgGpaGl~aA~~~ar~g~-~v~vie~~ 37 (192)
T d1vdca1 6 TRLCIVGSGPAAHTAAIYAARAEL-KPLLFEGW 37 (192)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC-CCEEECCS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCC-cEEEEEee
Confidence 579999999999998888888999 78888643
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=83.70 E-value=0.8 Score=35.66 Aligned_cols=87 Identities=16% Similarity=0.153 Sum_probs=56.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 185 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
-.+++|.|+|.|.+|...+++++.+|+ +|+..++..... ....... ..+.+.+.+ .|++.-+.
T Consensus 42 l~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~-------~~~~~~~----~~l~ell~~-----sDii~i~~ 104 (188)
T d1sc6a1 42 ARGKKLGIIGYGHIGTQLGILAESLGM-YVYFYDIENKLP-------LGNATQV----QHLSDLLNM-----SDVVSLHV 104 (188)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCCC-------CTTCEEC----SCHHHHHHH-----CSEEEECC
T ss_pred ccceEEEEeecccchhhhhhhcccccc-eEeeccccccch-------hhhhhhh----hhHHHHHhh-----ccceeecc
Confidence 357899999999999999999999999 899997654311 0011111 123333333 67777655
Q ss_pred CC-HH----HHHHHHHHhccCCceEEEEcc
Q 017431 265 GN-VS----VMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 265 g~-~~----~~~~~~~~l~~~~G~iv~~g~ 289 (371)
.- +. .-...++.|+++ ..+|-.+.
T Consensus 105 plt~~T~~li~~~~l~~mk~~-a~lIN~aR 133 (188)
T d1sc6a1 105 PENPSTKNMMGAKEISLMKPG-SLLINASR 133 (188)
T ss_dssp CSSTTTTTCBCHHHHHHSCTT-EEEEECSC
T ss_pred cCCcchhhhccHHHHhhCCCC-CEEEEcCc
Confidence 42 11 135667778775 77776644
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=83.61 E-value=0.54 Score=40.12 Aligned_cols=35 Identities=26% Similarity=0.321 Sum_probs=26.8
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChh
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPK 222 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~-~~v~~v~~~~~ 222 (371)
++|+|+|||..|++++..++..|. .+|++.++.++
T Consensus 5 KrVaIIGaG~sGl~~A~~L~~~~~~~~v~vfEk~~~ 40 (335)
T d2gv8a1 5 RKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGS 40 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred CeEEEECcCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 689999999999988765554442 28999987753
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=83.56 E-value=0.48 Score=37.40 Aligned_cols=68 Identities=19% Similarity=0.312 Sum_probs=41.7
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccC
Q 017431 188 SIVAVFGL-GTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 265 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~la~~~g~~-~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g 265 (371)
++|||+|+ |-+|...+..+...|.. +|++..+++... ...+ .... .++.+. .....+..|.+++|+|
T Consensus 3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~-------~~~~-~~~~--~d~~~~-~~~~~~~~d~vi~~~g 71 (212)
T d2a35a1 3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE-------HPRL-DNPV--GPLAEL-LPQLDGSIDTAFCCLG 71 (212)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC-------CTTE-ECCB--SCHHHH-GGGCCSCCSEEEECCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh-------cccc-cccc--cchhhh-hhccccchheeeeeee
Confidence 79999998 99999999988888852 566655443210 0011 1111 233333 3333337899999987
Q ss_pred C
Q 017431 266 N 266 (371)
Q Consensus 266 ~ 266 (371)
.
T Consensus 72 ~ 72 (212)
T d2a35a1 72 T 72 (212)
T ss_dssp C
T ss_pred e
Confidence 6
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=83.47 E-value=0.76 Score=37.22 Aligned_cols=34 Identities=29% Similarity=0.389 Sum_probs=28.6
Q ss_pred CCCCCEEEEEcCChHHHHHHHHH-HHcCCCeEEEEc
Q 017431 184 VEPGSIVAVFGLGTVGLAVAEGA-KAAGASRVIGID 218 (371)
Q Consensus 184 ~~~g~~VlI~Gag~vG~~ai~la-~~~g~~~v~~v~ 218 (371)
--+|.+|+|.|.|.+|..+++.+ +..|+ +|++++
T Consensus 28 ~l~g~~vaIqG~GnVG~~~a~~L~~e~Ga-~vv~vs 62 (234)
T d1b26a1 28 DPKKATVAVQGFGNVGQFAALLISQELGS-KVVAVS 62 (234)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHHCC-EEEEEE
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHhcCC-ceEEee
Confidence 34789999999999999988877 67899 787775
|
| >d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=83.21 E-value=0.56 Score=39.37 Aligned_cols=32 Identities=41% Similarity=0.585 Sum_probs=27.6
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
-|||+|+|..|+++..-|...|+ +|++++..+
T Consensus 18 DVlVIG~G~aGl~aA~~la~~G~-~V~lvEK~~ 49 (308)
T d1y0pa2 18 DVVVVGSGGAGFSAAISATDSGA-KVILIEKEP 49 (308)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCC-cEEEEecCC
Confidence 47899999999998888888999 899997643
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=83.07 E-value=0.33 Score=37.29 Aligned_cols=81 Identities=19% Similarity=0.224 Sum_probs=50.3
Q ss_pred EEEEEcCChHHHHHHHHHHHc-CCCeEEE-EcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEccCC
Q 017431 189 IVAVFGLGTVGLAVAEGAKAA-GASRVIG-IDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 266 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~-g~~~v~~-v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~g~ 266 (371)
+|.|+|.|.+|...+...+.. ++ .+++ +++++++. ....+....+ . ... ...+|+++.|++.
T Consensus 5 rvgiiG~G~ig~~~~~~l~~~~~~-elvav~~~~~~~~------~~~~~~~~~~----~----~~~-~~~~D~Vvi~tp~ 68 (170)
T d1f06a1 5 RVAIVGYGNLGRSVEKLIAKQPDM-DLVGIFSRRATLD------TKTPVFDVAD----V----DKH-ADDVDVLFLCMGS 68 (170)
T ss_dssp EEEEECCSHHHHHHHHHHTTCSSE-EEEEEEESSSCCS------SSSCEEEGGG----G----GGT-TTTCSEEEECSCT
T ss_pred eEEEECChHHHHHHHHHHHhCCCc-EEEEEEecccccc------cccccccchh----h----hhh-ccccceEEEeCCC
Confidence 688999999998877777665 56 4444 44444321 1111221111 1 111 1269999999988
Q ss_pred HHHHHHHHHHhccCCceEEE
Q 017431 267 VSVMRAALECCHKGWGTSVI 286 (371)
Q Consensus 267 ~~~~~~~~~~l~~~~G~iv~ 286 (371)
....+.+.++|..| -.+|.
T Consensus 69 ~~h~~~a~~aL~aG-~~vv~ 87 (170)
T d1f06a1 69 ATDIPEQAPKFAQF-ACTVD 87 (170)
T ss_dssp TTHHHHHHHHHTTT-SEEEC
T ss_pred cccHHHHHHHHHCC-CcEEE
Confidence 66688999999995 66553
|
| >d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=83.02 E-value=0.58 Score=37.02 Aligned_cols=30 Identities=27% Similarity=0.282 Sum_probs=26.7
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017431 190 VAVFGLGTVGLAVAEGAKAAGASRVIGIDID 220 (371)
Q Consensus 190 VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~ 220 (371)
|+|+|+|+-|+.|...|...|. +|++++..
T Consensus 6 viIIGgGpAGl~aA~~aar~G~-~V~viE~~ 35 (229)
T d3lada1 6 VIVIGAGPGGYVAAIKSAQLGL-KTALIEKY 35 (229)
T ss_dssp EEEECCSHHHHHHHHHHHHHTC-CEEEEECC
T ss_pred EEEECcCHHHHHHHHHHHHCCC-eEEEEecc
Confidence 7888999999999999999999 89888754
|
| >d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]
Probab=82.93 E-value=1.9 Score=32.74 Aligned_cols=100 Identities=19% Similarity=0.259 Sum_probs=58.5
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcC-Ch--hhHHHHHhcCCcE--------------EecCCCCCchHHHHHHh
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDI-DP--KKFDRAKNFGVTE--------------FVNPKDHDKPIQQVLVD 251 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~-~~--~~~~~~~~~g~~~--------------vi~~~~~~~~~~~~~~~ 251 (371)
+|-|.|-|-+|.++.+.+...+. .++++.. .. +...++-++-..+ .++-+...-.......+
T Consensus 2 kIgINGfGRIGR~~~R~~~~~~~-~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~~ 80 (169)
T d1dssg1 2 KIGINGFGRIGRLVLRAALEMGA-QVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPEN 80 (169)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTC-CEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred eEEEECCcHHHHHHHHHHHhCCC-cEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCChHH
Confidence 57889999999999999988888 5666633 22 3444443321100 11110000000000111
Q ss_pred hc-CC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 252 LT-DG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 252 ~~-~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+. .. ++|+|+||+|.-...+.+...+..+ .+-|.+..+
T Consensus 81 i~W~~~gvD~ViEcTG~f~~~~~~~~hl~~g-akkViisaP 120 (169)
T d1dssg1 81 IPWSKAGAEYIVESTGVFTTIEKASAHFKGG-AKKVIISAP 120 (169)
T ss_dssp CCHHHHTCCEEEECSSSCCSHHHHGGGGTTT-CSEEEESSC
T ss_pred CCccccCCCEEEecCceEcCHHHHHHHHhcC-CceEeecCC
Confidence 11 12 8999999999866677888888886 777777654
|
| >d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Malate oxidoreductase (malic enzyme) species: Thermotoga maritima [TaxId: 2336]
Probab=82.85 E-value=0.96 Score=36.15 Aligned_cols=45 Identities=24% Similarity=0.270 Sum_probs=37.2
Q ss_pred hhhhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017431 176 GAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 220 (371)
Q Consensus 176 ~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~ 220 (371)
.++.....--.+++|++.|||..|....++....+.++++.+++.
T Consensus 15 ~a~~~~g~~l~d~riv~~GAGsAg~gia~~l~~~~~~~i~~~D~~ 59 (222)
T d1vl6a1 15 NALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 59 (222)
T ss_dssp HHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred HHHHHhCCChhhcEEEEEChHHHHHHHHHHHHHhcccceEeecce
Confidence 345455556678999999999999998999999999999999875
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=82.81 E-value=0.45 Score=39.42 Aligned_cols=60 Identities=18% Similarity=0.323 Sum_probs=36.1
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcEEecCCCCCchHHHHHHhhcCC-CccEEEEccC
Q 017431 189 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG 265 (371)
Q Consensus 189 ~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~g-g~dvvid~~g 265 (371)
+|||+|+ |-+|...+..+...|. ++++++.... +- .|..+ .. .+.+...+ ++|+||++++
T Consensus 2 KILItG~tGfiG~~l~~~L~~~g~--~v~~~~~~~~------~~----~Dl~~--~~---~~~~~i~~~~~D~Vih~Aa 63 (298)
T d1n2sa_ 2 NILLFGKTGQVGWELQRSLAPVGN--LIALDVHSKE------FC----GDFSN--PK---GVAETVRKLRPDVIVNAAA 63 (298)
T ss_dssp EEEEECTTSHHHHHHHHHTTTTSE--EEEECTTCSS------SC----CCTTC--HH---HHHHHHHHHCCSEEEECCC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCC--EEEEECCCcc------cc----CcCCC--HH---HHHHHHHHcCCCEEEEecc
Confidence 6999988 9999998887776664 5555443321 11 11222 11 22232223 7899999886
|
| >d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Threonine deaminase species: Escherichia coli [TaxId: 562]
Probab=82.77 E-value=3.9 Score=34.44 Aligned_cols=102 Identities=15% Similarity=0.144 Sum_probs=62.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEc--CChhhHHHHHhcCCcEEecCCCC----------------------
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID--IDPKKFDRAKNFGVTEFVNPKDH---------------------- 241 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~--~~~~~~~~~~~~g~~~vi~~~~~---------------------- 241 (371)
+..+|+...+|..|.+....++..|..-++.+. .+.+|.+.++.+|+.-++.....
T Consensus 74 ~~~~vv~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (331)
T d1tdja1 74 KAHGVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIELSQQQGFTWVPPF 153 (331)
T ss_dssp CSSSCEEEECSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHSCEEECCCSSHHHHHHHHHHHHHHHCCEECCSS
T ss_pred CCCeeeecccchhHHHHHHhhccccccceeeccccchhHHHHHHHhcCCEEEEcCcccccchhhhhhhhhcCCCcccccc
Confidence 444555556688999999999999994444432 24467788889998544322221
Q ss_pred --------CchHHHHHHhhcCCCccEEEEccCCHHHH---HHHHHHhccCCceEEEEcc
Q 017431 242 --------DKPIQQVLVDLTDGGVDYSFECIGNVSVM---RAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 242 --------~~~~~~~~~~~~~gg~dvvid~~g~~~~~---~~~~~~l~~~~G~iv~~g~ 289 (371)
......++.+.. +.+|.+|-++|+..++ -..++.+.+. -+++.+..
T Consensus 154 ~~~~~~~g~~t~~~Ei~~q~-~~~D~vv~~~G~GG~~aG~~~~~~~~~~~-~~ii~ve~ 210 (331)
T d1tdja1 154 DHPMVIAGQGTLALELLQQD-AHLDRVFVPVGGGGLAAGVAVLIKQLMPQ-IKVIAVEA 210 (331)
T ss_dssp CCHHHHHHHHHHHHHHHHHC-TTCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEEEE
T ss_pred CChHHhhhhhhHHHHHHHhc-CCCCEEEEeCChhHHHHHHHHHHHHhCCC-cEEEEecc
Confidence 111222333332 2699999988885543 4455555664 77777743
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=82.68 E-value=0.63 Score=38.88 Aligned_cols=32 Identities=22% Similarity=0.387 Sum_probs=25.9
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 220 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~ 220 (371)
.|+|+|+|.+|++++.-+...|.++|++++++
T Consensus 3 dViIIGaGi~G~s~A~~La~~G~~~V~liE~~ 34 (305)
T d1pj5a2 3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQG 34 (305)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 48999999999987766666787579999765
|
| >d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.67 E-value=0.64 Score=36.74 Aligned_cols=30 Identities=37% Similarity=0.421 Sum_probs=26.8
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017431 190 VAVFGLGTVGLAVAEGAKAAGASRVIGIDID 220 (371)
Q Consensus 190 VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~ 220 (371)
|+|+|+|+.|+.|...+..+|. +|++++..
T Consensus 6 viIIG~GpaG~~aA~~aar~G~-kV~vIEk~ 35 (221)
T d3grsa1 6 YLVIGGGSGGLASARRAAELGA-RAAVVESH 35 (221)
T ss_dssp EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred EEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence 6788999999999999999999 88888754
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=82.43 E-value=4 Score=30.31 Aligned_cols=87 Identities=17% Similarity=0.154 Sum_probs=54.3
Q ss_pred EEEEEcCChHHHH-HHHHHHHc-CCCeEEE-EcCChhhH-HHHHhcCCcEEecCCCCCchHHHHHHhhcCCCccEEEEcc
Q 017431 189 IVAVFGLGTVGLA-VAEGAKAA-GASRVIG-IDIDPKKF-DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 264 (371)
Q Consensus 189 ~VlI~Gag~vG~~-ai~la~~~-g~~~v~~-v~~~~~~~-~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~gg~dvvid~~ 264 (371)
+|.|+|+|.+|.- .+...+.. ++ .+++ .++++++. ++.++++... + ..+. .+. ..+|+|+-|+
T Consensus 3 ri~iIG~G~~g~~~~~~~l~~~~~~-~i~~v~d~~~~~~~~~~~~~~~~~-~------~~~~-~l~----~~~D~V~I~t 69 (164)
T d1tlta1 3 RIGVVGLGGIAQKAWLPVLAAASDW-TLQGAWSPTRAKALPICESWRIPY-A------DSLS-SLA----ASCDAVFVHS 69 (164)
T ss_dssp EEEEECCSTHHHHTHHHHHHSCSSE-EEEEEECSSCTTHHHHHHHHTCCB-C------SSHH-HHH----TTCSEEEECS
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCCc-EEEEEEechhHhhhhhhhcccccc-c------ccch-hhh----hhcccccccc
Confidence 5789999998863 55555544 66 5554 55655554 4556777641 1 1222 222 2589999988
Q ss_pred CCHHHHHHHHHHhccCCceEEEEccC
Q 017431 265 GNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 265 g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
......+.+..++.. |.=|.+..+
T Consensus 70 p~~~h~~~~~~al~~--gk~V~~EKP 93 (164)
T d1tlta1 70 STASHFDVVSTLLNA--GVHVCVDKP 93 (164)
T ss_dssp CTTHHHHHHHHHHHT--TCEEEEESS
T ss_pred cchhccccccccccc--cceeecccc
Confidence 876667888887877 444556543
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.40 E-value=0.62 Score=39.75 Aligned_cols=33 Identities=30% Similarity=0.262 Sum_probs=28.6
Q ss_pred CEE-EEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 188 SIV-AVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 188 ~~V-lI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
++| ||+|+ |-+|...+..+...|+ +|+++++..
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g~-~V~~i~r~~ 35 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKGY-EVHGIVRRS 35 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCC
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCcC-EEEEEECCC
Confidence 357 99988 8999999999989999 899998854
|
| >d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermotoga maritima [TaxId: 2336]
Probab=82.29 E-value=2.5 Score=32.02 Aligned_cols=98 Identities=22% Similarity=0.260 Sum_probs=55.2
Q ss_pred CEEEEEcCChHHHHHHHHHHHc---CCCeEEEEcCCh--hhHHHHHhc----CC---c------E-EecCCCC---CchH
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAA---GASRVIGIDIDP--KKFDRAKNF----GV---T------E-FVNPKDH---DKPI 245 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~---g~~~v~~v~~~~--~~~~~~~~~----g~---~------~-vi~~~~~---~~~~ 245 (371)
.+|.|.|-|-+|.++.+.+... .. .|+++.... +...++-++ |. . . +++-... ...
T Consensus 1 ~kIgINGfGRIGR~v~R~~~~~~~~~i-~vvaINd~~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~- 78 (169)
T d1hdgo1 1 ARVAINGFGRIGRLVYRIIYERKNPDI-EVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEP- 78 (169)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTC-EEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCS-
T ss_pred CEEEEECCChHHHHHHHHHHhccCCCE-EEEEeccCccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCC-
Confidence 3688999999999999877643 25 667763332 333333222 11 0 0 1110000 000
Q ss_pred HHHHHhhcC-C-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 246 QQVLVDLTD-G-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 246 ~~~~~~~~~-g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
...++.. . ++|+|+||+|--...+.+...+..+ ..=|.+..+
T Consensus 79 --~p~~i~W~~~gvD~ViEcTG~f~t~~~~~~hl~~G-akkViiSAP 122 (169)
T d1hdgo1 79 --DPSKLPWKDLGVDFVIESTGVFRNREKAELHLQAG-AKKVIITAP 122 (169)
T ss_dssp --SGGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTT-CSEEEESSC
T ss_pred --ChhhCCccccCCCEEEEecceeccccchhhhccCC-CceEEEecc
Confidence 0111111 2 7999999999855567777788875 666667554
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=82.24 E-value=0.65 Score=38.26 Aligned_cols=32 Identities=25% Similarity=0.350 Sum_probs=27.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
-|+|+|+|.+|++++.-+...|. +|++++..+
T Consensus 5 DvvIIGaGi~Gls~A~~La~~G~-~V~viE~~~ 36 (281)
T d2gf3a1 5 DVIVVGAGSMGMAAGYQLAKQGV-KTLLVDAFD 36 (281)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-CEEEECSSC
T ss_pred CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence 38899999999998888878899 899997643
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=82.16 E-value=1.2 Score=31.51 Aligned_cols=36 Identities=19% Similarity=0.058 Sum_probs=28.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCC--eEEEEcCCh
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAGAS--RVIGIDIDP 221 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g~~--~v~~v~~~~ 221 (371)
.+++++|+|+|.+|.-++..++.+|.+ .|+.+.+.+
T Consensus 19 ~p~~v~ivGgG~ig~E~A~~l~~l~~~~~~Vtli~~~~ 56 (117)
T d1aoga2 19 PPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGE 56 (117)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred cCCeEEEECCcHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence 357999999999999888887777642 688886654
|
| >d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Escherichia coli [TaxId: 562]
Probab=82.00 E-value=2.4 Score=32.09 Aligned_cols=100 Identities=22% Similarity=0.223 Sum_probs=56.0
Q ss_pred EEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHH--HHHhc----CC---c-------EEecCCCCCchHHHHHHh
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFD--RAKNF----GV---T-------EFVNPKDHDKPIQQVLVD 251 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g-~~~v~~v~~~~~~~~--~~~~~----g~---~-------~vi~~~~~~~~~~~~~~~ 251 (371)
+|.|.|-|-+|.++.+.+.... . .++++....+... ++-++ |. . .+++.....-.......+
T Consensus 3 kigINGFGRIGR~v~R~~~~~~~i-~ivaINd~~~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~p~~ 81 (166)
T d1gado1 3 KVGINGFGRIGRIVFRAAQKRSDI-EIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPAN 81 (166)
T ss_dssp EEEEECCSHHHHHHHHHHHTCSSE-EEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred EEEEECCcHHHHHHHHHHhhCCCe-EEEEEeCCCCHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCChHH
Confidence 5778899999999999887664 4 6677654333222 22222 11 0 011110000000000111
Q ss_pred hc-CC-CccEEEEccCCHHHHHHHHHHhccCCceEEEEccC
Q 017431 252 LT-DG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 290 (371)
Q Consensus 252 ~~-~g-g~dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 290 (371)
+. +. ++|+|+||+|--...+.+...+..+ .+=|.+..+
T Consensus 82 i~W~~~gvDiViEcTG~f~t~~~~~~hl~~g-akkViiSaP 121 (166)
T d1gado1 82 LKWDEVGVDVVAEATGLFLTDETARKHITAG-AKKVVMTGP 121 (166)
T ss_dssp GCHHHHTCSEEEECSSSCCSHHHHTHHHHTT-CSEEEESSC
T ss_pred CCccccCCCEEEEccccccCHHHHHHHhcCC-CceEEeecc
Confidence 11 12 8999999999755567777888886 776777654
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=81.97 E-value=1.3 Score=32.89 Aligned_cols=39 Identities=23% Similarity=0.284 Sum_probs=31.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhH
Q 017431 186 PGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKF 224 (371)
Q Consensus 186 ~g~~VlI~Gag~vG~~ai~la~~~g-~~~v~~v~~~~~~~ 224 (371)
+..+|.|+|+|.+|...+..+...| +..++.++.++++.
T Consensus 4 ~~~KI~IIGaG~VG~~~A~~l~~~~~~~elvL~D~~~~~~ 43 (146)
T d1ez4a1 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRT 43 (146)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCcEEEEeecccchh
Confidence 3468999999999998777777766 56899999888653
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=81.93 E-value=0.98 Score=33.56 Aligned_cols=92 Identities=17% Similarity=0.214 Sum_probs=47.2
Q ss_pred CEEEEEcC-ChHHHHHHHH-HHHc--CCCeEEEEcCChhhHHHHHhcCC-cEEecCCCCCchHHHHHHhhcCCCccEEEE
Q 017431 188 SIVAVFGL-GTVGLAVAEG-AKAA--GASRVIGIDIDPKKFDRAKNFGV-TEFVNPKDHDKPIQQVLVDLTDGGVDYSFE 262 (371)
Q Consensus 188 ~~VlI~Ga-g~vG~~ai~l-a~~~--g~~~v~~v~~~~~~~~~~~~~g~-~~vi~~~~~~~~~~~~~~~~~~gg~dvvid 262 (371)
++|.|+|| |.+|+-.+++ +.+. -...++...++..........+- ..+....+ .. .+ .++|++|-
T Consensus 2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~~----~~-~~-----~~~DivF~ 71 (146)
T d1t4ba1 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFD----LE-AL-----KALDIIVT 71 (146)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTC----HH-HH-----HTCSEEEE
T ss_pred cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecccc----hh-hh-----hcCcEEEE
Confidence 37889999 9999999974 4432 33366666554432111111110 01111111 10 11 16999999
Q ss_pred ccCCHHHHHHHHHHhccCC-ceEEEEcc
Q 017431 263 CIGNVSVMRAALECCHKGW-GTSVIVGV 289 (371)
Q Consensus 263 ~~g~~~~~~~~~~~l~~~~-G~iv~~g~ 289 (371)
|+++..+.+..-+....+. ..+++.++
T Consensus 72 a~~~~~s~~~~~~~~~~g~~~~VID~Ss 99 (146)
T d1t4ba1 72 CQGGDYTNEIYPKLRESGWQGYWIDAAS 99 (146)
T ss_dssp CSCHHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred ecCchHHHHhhHHHHhcCCCeecccCCc
Confidence 9998654444444444431 13555544
|
| >d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermus thermophilus [TaxId: 274]
Probab=81.66 E-value=4.9 Score=30.70 Aligned_cols=101 Identities=28% Similarity=0.360 Sum_probs=60.3
Q ss_pred CCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCcE--EecCCCCCchHHHHHHhhcCCCcc
Q 017431 182 AKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--FVNPKDHDKPIQQVLVDLTDGGVD 258 (371)
Q Consensus 182 ~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~~~~g~~~--vi~~~~~~~~~~~~~~~~~~gg~d 258 (371)
..+++|.++ |.++ |.=|+.. .+++. +. +|++++++++..+.++++-... .+...- .++.+.+.....+.+|
T Consensus 14 l~~~~g~~~-vD~T~G~GGhs~-~iL~~-~~-~viaiD~D~~ai~~a~~~~~~~~~~~~~~f--~~~~~~l~~~~~~~vd 87 (182)
T d1wg8a2 14 LAVRPGGVY-VDATLGGAGHAR-GILER-GG-RVIGLDQDPEAVARAKGLHLPGLTVVQGNF--RHLKRHLAALGVERVD 87 (182)
T ss_dssp HTCCTTCEE-EETTCTTSHHHH-HHHHT-TC-EEEEEESCHHHHHHHHHTCCTTEEEEESCG--GGHHHHHHHTTCSCEE
T ss_pred cCCCCCCEE-EEeCCCCcHHHH-HHhcc-cC-cEEEEhhhhhHHHHHhhccccceeEeehHH--HHHHHHHHHcCCCccC
Confidence 456777764 5555 5445543 44443 55 8999999999888887643222 233222 4455555554444788
Q ss_pred EEE-EccCCH--------------HHHHHHHHHhccCCceEEEEcc
Q 017431 259 YSF-ECIGNV--------------SVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 259 vvi-d~~g~~--------------~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
.|+ |.--+. ..+....+.+.++ |+++.+..
T Consensus 88 gIl~DLGvSs~qld~~~re~~~~~~~L~~~~~~lk~g-g~~~ii~f 132 (182)
T d1wg8a2 88 GILADLGVSSFHLDDPSDELNALKEFLEQAAEVLAPG-GRLVVIAF 132 (182)
T ss_dssp EEEEECSCCHHHHHCGGTHHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred EEEEEccCCHHHhhcchHHHHHHHHHHHHHHhhhCCC-CeEEEEec
Confidence 555 542221 1367777888886 88877754
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=81.65 E-value=1.2 Score=33.05 Aligned_cols=48 Identities=19% Similarity=0.066 Sum_probs=38.2
Q ss_pred hhhhhhhhhcCCCCCCCEEEEE--cCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017431 172 PTGLGAVWNTAKVEPGSIVAVF--GLGTVGLAVAEGAKAAGASRVIGIDIDPK 222 (371)
Q Consensus 172 ~ta~~~l~~~~~~~~g~~VlI~--Gag~vG~~ai~la~~~g~~~v~~v~~~~~ 222 (371)
.|....+ ..+..+++.|+|+ |+|.+|+-+++.+...|+ +|+.+++.+.
T Consensus 26 ~t~~d~l--~~~~~~~~~vvi~d~ggg~ig~e~A~~la~~G~-~Vtlv~~~~~ 75 (156)
T d1djqa2 26 LTPEQVM--DGKKKIGKRVVILNADTYFMAPSLAEKLATAGH-EVTIVSGVHL 75 (156)
T ss_dssp ECHHHHH--HTCSCCCSEEEEEECCCSSHHHHHHHHHHHTTC-EEEEEESSCT
T ss_pred ECHHHHh--cCccccCCceEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCc
Confidence 3555543 3567788899887 778999999999999999 8999987654
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=81.60 E-value=1.2 Score=31.41 Aligned_cols=34 Identities=18% Similarity=0.016 Sum_probs=26.6
Q ss_pred CCEEEEEcCChHHHHHHHHHHHc---CCCeEEEEcCCh
Q 017431 187 GSIVAVFGLGTVGLAVAEGAKAA---GASRVIGIDIDP 221 (371)
Q Consensus 187 g~~VlI~Gag~vG~~ai~la~~~---g~~~v~~v~~~~ 221 (371)
.++++|+|+|.+|+-.+.++..+ |. +|..+.+.+
T Consensus 18 p~~v~IiGgG~ig~E~A~~l~~~~~~g~-~Vtli~~~~ 54 (117)
T d1feca2 18 PKRALCVGGGYISIEFAGIFNAYKARGG-QVDLAYRGD 54 (117)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTC-EEEEEESSS
T ss_pred CCeEEEECCChHHHHHHHHhHhhccccc-ccceecccc
Confidence 47999999999999877776554 66 888887654
|
| >d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Adrenodoxin reductase of mitochondrial p450 systems species: Cow (Bos taurus) [TaxId: 9913]
Probab=81.10 E-value=0.83 Score=36.40 Aligned_cols=33 Identities=21% Similarity=0.154 Sum_probs=26.6
Q ss_pred EEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChh
Q 017431 189 IVAVFGLGTVGLAVAEGAKAA--GASRVIGIDIDPK 222 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~--g~~~v~~v~~~~~ 222 (371)
+|.|+|+|+.|+.|+..++.. |+ .|++++..+.
T Consensus 3 kv~iIGaGpaGl~aA~~L~~~~~~~-~V~v~e~~~~ 37 (230)
T d1cjca2 3 QICVVGSGPAGFYTAQHLLKHHSRA-HVDIYEKQLV 37 (230)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSSC-EEEEECSSSS
T ss_pred eEEEECccHHHHHHHHHHHhcCCCC-eEEEEeCCCC
Confidence 799999999999988766544 67 8998977654
|
| >d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Carminomycin 4-O-methyltransferase species: Streptomyces peucetius [TaxId: 1950]
Probab=81.03 E-value=0.44 Score=39.10 Aligned_cols=101 Identities=18% Similarity=0.110 Sum_probs=61.0
Q ss_pred hhhcCCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCc-EE-ecCCCCCchHHHHHHh
Q 017431 178 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVT-EF-VNPKDHDKPIQQVLVD 251 (371)
Q Consensus 178 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~~~~~~~----~~~g~~-~v-i~~~~~~~~~~~~~~~ 251 (371)
+.....+....+||=+|+| .|..++.+++...--++++++.. +..+.+ .+.+.. .+ +...+ + .+
T Consensus 72 ~~~~~d~~~~~~VLDvGcG-~G~~~~~la~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~rv~~~~~D----~----~~ 141 (253)
T d1tw3a2 72 PAAAYDWTNVRHVLDVGGG-KGGFAAAIARRAPHVSATVLEMA-GTVDTARSYLKDEGLSDRVDVVEGD----F----FE 141 (253)
T ss_dssp HHHHSCCTTCSEEEEETCT-TSHHHHHHHHHCTTCEEEEEECT-THHHHHHHHHHHTTCTTTEEEEECC----T----TS
T ss_pred HHhhcCCccCCEEEEeCCC-CCHHHHHHHHhcceeEEEEccCH-HHHHHHHHHHHHhhcccchhhcccc----c----hh
Confidence 3455567778899988886 57788888888743388888864 333333 333432 11 11111 1 11
Q ss_pred hcCCCccEEEEcc-----CCH---HHHHHHHHHhccCCceEEEEcc
Q 017431 252 LTDGGVDYSFECI-----GNV---SVMRAALECCHKGWGTSVIVGV 289 (371)
Q Consensus 252 ~~~gg~dvvid~~-----g~~---~~~~~~~~~l~~~~G~iv~~g~ 289 (371)
....++|+|+-.. +.+ .+++.+.+.|+++ |+++....
T Consensus 142 ~~~~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPG-G~l~i~e~ 186 (253)
T d1tw3a2 142 PLPRKADAIILSFVLLNWPDHDAVRILTRCAEALEPG-GRILIHER 186 (253)
T ss_dssp CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEE-EEEEEEEC
T ss_pred hcccchhheeeccccccCCchhhHHHHHHHHHhcCCC-cEEEEEec
Confidence 1123799888432 112 3478899999997 99987754
|
| >d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.97 E-value=1.6 Score=31.81 Aligned_cols=37 Identities=22% Similarity=0.276 Sum_probs=26.4
Q ss_pred CCCCEEEEEcCChHHHHHH-HHH---HHcCCCeEEEEcCChh
Q 017431 185 EPGSIVAVFGLGTVGLAVA-EGA---KAAGASRVIGIDIDPK 222 (371)
Q Consensus 185 ~~g~~VlI~Gag~vG~~ai-~la---~~~g~~~v~~v~~~~~ 222 (371)
+++++++|+|+|.+|.-.+ .++ +..|. +|+.+...+.
T Consensus 35 ~~~k~i~IvGgG~~G~E~A~~l~~~~~~~g~-~Vt~i~~~~~ 75 (137)
T d1m6ia2 35 REVKSITIIGGGFLGSELACALGRKARALGT-EVIQLFPEKG 75 (137)
T ss_dssp HHCSEEEEECCSHHHHHHHHHHHHHHHHHTC-EEEEECSSSS
T ss_pred hcCCEEEEECCCHHHHHHHHHHHHHHHhcCC-EEEEeccccc
Confidence 4568999999999985433 333 46788 8888876544
|
| >d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=80.67 E-value=0.71 Score=39.03 Aligned_cols=32 Identities=44% Similarity=0.599 Sum_probs=27.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 221 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~~~ 221 (371)
-|||+|+|..|+.|..-|...|+ +|++++..+
T Consensus 21 DVvVIGaG~aGl~AA~~aa~~G~-~V~vlEK~~ 52 (317)
T d1qo8a2 21 QVLVVGAGSAGFNASLAAKKAGA-NVILVDKAP 52 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTC-CEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence 48899999999999888888899 899987543
|
| >d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Ferredoxin:NADP reductase FprA species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=80.21 E-value=0.6 Score=37.31 Aligned_cols=35 Identities=20% Similarity=0.259 Sum_probs=28.1
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCC------eEEEEcCChh
Q 017431 188 SIVAVFGLGTVGLAVAEGAKAAGAS------RVIGIDIDPK 222 (371)
Q Consensus 188 ~~VlI~Gag~vG~~ai~la~~~g~~------~v~~v~~~~~ 222 (371)
.+|+|+|+|+.|++|+..+...|.. .|.+.+..+.
T Consensus 3 ~~VaVIGaGpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~~ 43 (239)
T d1lqta2 3 YYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT 43 (239)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred cEEEEECcCHHHHHHHHHHHHcCCccccCCCceEEEecCCC
Confidence 4899999999999988887777631 6888887664
|
| >d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=80.11 E-value=0.69 Score=36.98 Aligned_cols=30 Identities=30% Similarity=0.412 Sum_probs=26.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 017431 189 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDI 219 (371)
Q Consensus 189 ~VlI~Gag~vG~~ai~la~~~g~~~v~~v~~ 219 (371)
-|+|+|+|+.|+.|+..|..+|. +|.+++.
T Consensus 5 DviVIG~GpaGl~aA~~aa~~G~-kV~viE~ 34 (235)
T d1h6va1 5 DLIIIGGGSGGLAAAKEAAKFDK-KVMVLDF 34 (235)
T ss_dssp EEEEECCSHHHHHHHHHHGGGCC-CEEEECC
T ss_pred CEEEECCCHHHHHHHHHHHHCCC-eEEEEec
Confidence 47889999999999999999999 8999974
|