Citrus Sinensis ID: 017451

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-

MASQNLVSTKLQIEAVLTVTPFQATDPRQTLRVSVTEPADSGIFRTCLNLILYYNKVVDEDSGWIVAGWIKESLSKVLAEQPMLGGRLRRREDGNGELEVVSNDSGARLIEAKMAMTLSEFLGSKERSEDAEAELVFWKDIDEQNPQYSPLFYVQVTNFECGGHSVGISCSILLADLLLKEDFLKKWADIHSAELAKNDGPNTPIFYLPNLKKPSYSAALYPSSSNQNKTWGKTMMFKISDHQNINLENESGRKLILVCVEDAEHKVGVKMASKFPVFFRGSYDLLKIESCTKHGNKIVGSQLKLKNQISTARWDDLGANEIAFGQGNKPARVTNWIGSVCDGLVMATPSSSVEGTCELNVIVSIPCEKLI

cccccccccEEEEEEEEEEEccccccccccEEcccccccccccccccEEEEEEEcccccccccHHHHHHHHHHHHHHHccccccccEEEEcccccccEEEEEccccEEEEEEEEcccHHHHcccccccHHHHHccccccccccccccccccEEEEEEEEcccEEEEEEEEccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEcccccEEEEEEccccccccccccccccEEEEEcccccccccEEcccccccEEEEEEcccccccEEEEEcccccccccEEEEEEEccccccc

ccccccEEEEEEEEEEEEEccccccccccEEEccccccHHccccccccEEEEEEccccccccccccHHHHHHHHHHHHHcccccccEEEEcccccEEEEEEcccccEEEEEEcccccHHHHHccccccccHHHcccccccccccccccccEEEEEEEEEccccEEEEEEEHHHcccHHHHHHHHHHHHHHHcccccccccccccHHHHHccccccccccccccccccccccccEEEEEEcHHHHHHHHHHcHHHHHHHHHHHHHHHccccccccEEEEEEEccccEEEEEcccccccccccccccccccEEEEHHHccccEEEEccccccEEEEEEEccccccEEEEEEccccccccEEEEEEEEccHccc

MASQNLVSTKLQIEAVLtvtpfqatdprqtlrvsvtepadsgifRTCLNLILYYNKvvdedsgwiVAGWIKESLSKVLAeqpmlggrlrrredgngelevvsndsGARLIEAKMAMTLSEFlgskersedAEAELVFWkdideqnpqysplfYVQVTNfecgghsvgiSCSILLADLLLKEDFLKKWADIHSAElakndgpntpifylpnlkkpsysaalypsssnqnktwgkTMMFKISdhqninlenesgRKLILVCVEDaehkvgvkmaskfpvffrgsydllkIESCTKHGNKIVGSQLKLKNQISTarwddlganeiafgqgnkparvtNWIGSVCDglvmatpsssvegtceLNVIVsipcekli

masqnlvstklQIEAVltvtpfqatdprqtlrvsvtepadsgifRTCLNLILYYNKVVDEDSGWIVAGWIKESLSKVlaeqpmlggrlrrredgngelevvsndsgarLIEAKMAMTLSEFLGSKERSEDAEAELVFWKDIDEQNPQYSPLFYVQVTNFECGGHSVGISCSILLADLLLKEDFLKKWADIHSaelakndgpntPIFYLPNLKKPSYSAALYPSSSNQNKTWGKTMMFKISDHQNINLENESGRKLILVCVEDAEHKVGVKMASKFPVFFRGSYDLLKIESCTKHGNKIVGSQLKLKNQISTARWDDLGANEIafgqgnkparVTNWIGSVCDGLVMATpsssvegtcelnvivsipcekli

MASQNLVSTKLQIEAVLTVTPFQATDPRQTLRVSVTEPADSGIFRTCLNLILYYNKVVDEDSGWIVAGWIKESLSKVLAEQPMLGGRLRRREDGNGELEVVSNDSGARLIEAKMAMTLSEFLGSKERSEDAEAELVFWKDIDEQNPQYSPLFYVQVTNFECGGHSVGISCSIlladlllkedflkkWADIHSAELAKNDGPNTPIFYLPNLKKpsysaalypsssNQNKTWGKTMMFKISDHQNINLENESGRKLILVCVEDAEHKVGVKMASKFPVFFRGSYDLLKIESCTKHGNKIVGSQLKLKNQISTARWDDLGANEIAFGQGNKPARVTNWIGSVCDGLVMATPSSSVEGTCELNVIVSIPCEKLI

*********KLQIEAVLTVTPFQATDPRQTLRVSVTEPADSGIFRTCLNLILYYNKVVDEDSGWIVAGWIKESLSKVLA******************************************************ELVFWKDIDEQNPQYSPLFYVQVTNFECGGHSVGISCSILLADLLLKEDFLKKWADIHSAELAKNDGPNTPIFYLPNLKK**Y*************TWGKTMMFKISDHQNINLENESGRKLILVCVEDAEHKVGVKMASKFPVFFRGSYDLLKIESCTKHGNKIVGSQLKLKNQISTARWDDLGANEIAFGQGNKPARVTNWIGSVCDGLVMATPSSSVEGTCELNVIVSIPC****

****************LTVTPFQATDPRQTLRVSVTEPADSGIFRTCLNLILYYNKVVDEDSGWIVAGWIKESLSKVLAEQPMLGGRLRRREDGNGELEVVSNDSGARLIEAKMAMTLSEFLGSKERSEDAEAELVFWKDIDEQNPQYSPLFYVQVTNFECGGHSVGISCSILLADLLLKEDFLKKWADIHSAEL****GPNTPIFYLPNLKK********************TMMFKISD**********GRKLILVCV**************FPVFFRGSYDLLKIESCT***************QISTARWDDLGANEIAFGQGNKPARVTNWIGSVCDGLVMATPSSSVEGTCELNVIVSIPCEKL*

********TKLQIEAVLTVTPFQATDPRQTLRVSVTEPADSGIFRTCLNLILYYNKVVDEDSGWIVAGWIKESLSKVLAEQPMLGGRLRRREDGNGELEVVSNDSGARLIEAKMAMTLSEFLGSKERSEDAEAELVFWKDIDEQNPQYSPLFYVQVTNFECGGHSVGISCSILLADLLLKEDFLKKWADIHSAELAKNDGPNTPIFYLPNLKKPSYSAALYPSSSNQNKTWGKTMMFKISDHQNINLENESGRKLILVCVEDAEHKVGVKMASKFPVFFRGSYDLLKIESCTKHGNKIVGSQLKLKNQISTARWDDLGANEIAFGQGNKPARVTNWIGSVCDGLVMATPSSSVEGTCELNVIVSIPCEKLI

****NLVSTKLQIEAVLTVTPFQATDPRQTLRVSVTEPADSGIFRTCLNLILYYNKVVDEDSGWIVAGWIKESLSKVLAEQPMLGGRLRRREDGNGELEVVSNDSGARLIEAKMAMTLSEFLGSKERSEDAEAELVFWKDIDEQNPQYSPLFYVQVTNFECGGHSVGISCSILLADLLLKEDFLKKWADIHSAELAKNDGPNTPIFYLPNLKKPSYSAALYPSSSNQNKTWGKTMMFKISDHQNINLENESGRKLILVCVEDAEHKVGVKMASKFPVFFRGSYDLLKIESCTKHGN*******KLKNQISTARWDDLGANEIAFGQGNKPARVTNWIGSVCDGLVMATPSSSVEGTCELNVIVSIPCE***

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		371	2.2.26 [Sep-21-2011]
Q8S9G6		439	Taxadien-5-alpha-ol O-ace	N/A	no	0.485	0.410	0.333	8e-12
Q9M6F0		439	Taxadien-5-alpha-ol O-ace	N/A	no	0.485	0.410	0.323	2e-10
Q9M6E2		440	10-deacetylbaccatin III 1	N/A	no	0.477	0.402	0.318	7e-10
Q8LL69		441	3'-N-debenzoyl-2'-deoxyta	N/A	no	0.444	0.374	0.322	4e-09
O64470		451	Spermidine hydroxycinnamo	no	no	0.431	0.354	0.297	6e-08
Q9FI40		443	BAHD acyltransferase At5g	no	no	0.466	0.390	0.302	1e-07
Q9FI78		433	Shikimate O-hydroxycinnam	no	no	0.469	0.401	0.271	2e-07
Q9FPW3		440	2-alpha-hydroxytaxane 2-O	N/A	no	0.350	0.295	0.305	5e-07
Q70PR7		421	Vinorine synthase OS=Rauv	N/A	no	0.398	0.351	0.271	1e-05
O23918		445	Anthranilate N-benzoyltra	N/A	no	0.334	0.278	0.294	2e-05

>sp\|Q8S9G6\|T5AT_TAXWC Taxadien-5-alpha-ol O-acetyltransferase OS=Taxus wallichiana var. chinensis PE=2 SV=1	Back alignment and function desciption

 Score = 71.6 bits (174), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 95/207 (45%), Gaps = 27/207 (13%)

Query: 27  PRQTLRVSVTEPADSGIFRTCLNLILYYNK-----VVDEDSGWIVAGWIKESLSKVLAEQ 81
           P+ TL++S  +    G+  +  N +L YN      +V  D     A  I+E+L+K+L   
Sbjct: 23  PKTTLQLSSIDNL-PGVRGSIFNALLIYNASPSPTMVSADP----AKLIREALAKILVYY 77

Query: 82  PMLGGRLRRREDGNGELEVVSNDSGARLIEAKMAMTLSEFLGSKERSEDAEAELVFWKDI 141
           P   GRLR  E  NG+LEV     GA  +EA MA      LG  + S  +  +L+F   +
Sbjct: 78  PPFAGRLRETE--NGDLEVECTGEGAMFLEA-MADNELSVLGDFDDSNPSFQQLLFSLPL 134

Query: 142 DEQNPQYSPLFYVQVTNFECGGHSVGISCSILLADLLLKEDFLKKWAD------------ 189
           D  N +  PL  VQVT F CGG  VG+S    + D      FLK  A+            
Sbjct: 135 D-TNFKDLPLLVVQVTRFTCGGFVVGVSFHHGVCDGRGAAQFLKGLAEMARGEVKLSLEP 193

Query: 190 IHSAELAKNDGPN-TPIFYLPNLKKPS 215
           I + EL K D P     F+   L+ PS
Sbjct: 194 IWNRELVKLDDPKYLQFFHFEFLRAPS 220

Taxus wallichiana var. chinensis (taxid: 29808)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 1EC: 6EC: 2

>sp\|Q9M6F0\|T5AT_TAXCU Taxadien-5-alpha-ol O-acetyltransferase OS=Taxus cuspidata GN=TAT PE=1 SV=1	Back alignment and function description

>sp\|Q9M6E2\|DBAT_TAXCU 10-deacetylbaccatin III 10-O-acetyltransferase OS=Taxus cuspidata PE=1 SV=1	Back alignment and function description

>sp\|Q8LL69\|DBNBT_TAXCA 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase OS=Taxus canadensis GN=TAX10 PE=1 SV=1	Back alignment and function description

>sp\|O64470\|SHT_ARATH Spermidine hydroxycinnamoyl transferase OS=Arabidopsis thaliana GN=SHT PE=1 SV=1	Back alignment and function description

>sp\|Q9FI40\|BAHD1_ARATH BAHD acyltransferase At5g47980 OS=Arabidopsis thaliana GN=BAHD1 PE=2 SV=1	Back alignment and function description

>sp\|Q9FI78\|HST_ARATH Shikimate O-hydroxycinnamoyltransferase OS=Arabidopsis thaliana GN=HST PE=2 SV=1	Back alignment and function description

>sp\|Q9FPW3\|DBBT_TAXCU 2-alpha-hydroxytaxane 2-O-benzoyltransferase OS=Taxus cuspidata PE=1 SV=1	Back alignment and function description

>sp\|Q70PR7\|VINSY_RAUSE Vinorine synthase OS=Rauvolfia serpentina GN=ACT PE=1 SV=2	Back alignment and function description

>sp\|O23918\|HCBT3_DIACA Anthranilate N-benzoyltransferase protein 3 OS=Dianthus caryophyllus GN=HCBT3 PE=1 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		371
255581972		373	transferase, putative [Ricinus communis]	0.956	0.951	0.547	1e-103
224071216		347	predicted protein [Populus trichocarpa]	0.876	0.936	0.518	1e-92
147852138		463	hypothetical protein VITISV_034111 [Viti	0.843	0.676	0.472	5e-77
356540559		368	PREDICTED: anthranilate N-benzoyltransfe	0.940	0.948	0.420	4e-76
357482175		362	Omega-hydroxypalmitate O-feruloyl transf	0.927	0.950	0.423	3e-73
296085722		282	unnamed protein product [Vitis vinifera]	0.654	0.861	0.497	4e-63
15242562		353	HXXXD-type acyl-transferase-like protein	0.894	0.940	0.382	2e-57
21537364		353	unknown [Arabidopsis thaliana]	0.894	0.940	0.379	1e-56
297810369		355	hypothetical protein ARALYDRAFT_324948 [	0.911	0.952	0.394	2e-56
224137916		157	predicted protein [Populus trichocarpa]	0.396	0.936	0.702	3e-53

>gi\|255581972\|ref\|XP_002531784.1\| transferase, putative [Ricinus communis] gi\|223528577\|gb\|EEF30598.1\| transferase, putative [Ricinus communis]	Back alignment and taxonomy information

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 201/367 (54%), Positives = 270/367 (73%), Gaps = 12/367 (3%)

Query: 7   VSTKLQIEAVLTVTPFQATDPRQTLRVSVT-EPADSGIFRTCLNLILYYNKVVDEDSGWI 65
           V  K QIEA+ TV PF  TDPRQ  +VSV  EP  SGIF+ C N++L YNK +++DSGW+
Sbjct: 11  VVPKPQIEAIQTVPPFVVTDPRQFRQVSVAKEPIGSGIFKGCFNIVLCYNKAMEKDSGWL 70

Query: 66  VAGWIKESLSKVLAEQPMLGGRLRRREDGNGELEVVSNDSGARLIEAKMA-MTLSEFLGS 124
           VAGWIKESL++ L EQP+L GRLRR EDG+GELE+VSNDSG RL+EAK+  M+L EFL  
Sbjct: 71  VAGWIKESLARALKEQPLLSGRLRRGEDGHGELEIVSNDSGVRLLEAKINNMSLQEFLDL 130

Query: 125 KERSEDAEAELVFWKDIDEQNPQYSPLFYVQVTNFECGGHSVGISCSILLADLLLKEDFL 184
           KER + AEAELVFWKDIDEQNPQ+SPLFYVQVTNF+CGG+SVGISCS LLADLL+ ++FL
Sbjct: 131 KER-DKAEAELVFWKDIDEQNPQFSPLFYVQVTNFQCGGYSVGISCSFLLADLLIMDNFL 189

Query: 185 KKWADIHSAELAKNDGPNTPIFYLPNLKKPSYSA-ALYPSSSNQNKTWGKTMMFKISDHQ 243
           +KWA I S  ++KN+GP  PIFYLPNLK  + S  +++ S+  +N   G+TM+F++S  +
Sbjct: 190 QKWAKIQSEMISKNEGPEVPIFYLPNLKPANLSPNSIFSSTPREN--CGQTMIFRMST-E 246

Query: 244 NINLENESGRKLILVCVEDAEHKVGVKMASKFPVFFRGSYDLLKIESCTKHGNKIVGSQL 303
           +++L+ +S +KL L+C+E+AE      +  +F  F + S  ++K+E+C K   ++  S +
Sbjct: 247 SMDLKEQSFKKLALLCLEEAEQTGRKILPDEFTFFVKESTKIIKVENCKK--TEVAKSHM 304

Query: 304 KLKNQISTARWDD-LGANEIAFGQGNKPARVTNWIGSVC-DGLVMATPSSSVEGTCELNV 361
           K +   S A   D LG NE+AF +GN PARV+ WIGSV  +G+V+  P    EG+ E+N+
Sbjct: 305 KNQIMSSCASLKDYLGMNELAFREGNGPARVSLWIGSVTSNGIVVGIPFPK-EGSSEVNI 363

Query: 362 IVSIPCE 368
           IV+IP E
Sbjct: 364 IVTIPYE 370

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|224071216\|ref\|XP_002303376.1\| predicted protein [Populus trichocarpa] gi\|222840808\|gb\|EEE78355.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|147852138\|emb\|CAN80163.1\| hypothetical protein VITISV_034111 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356540559\|ref\|XP_003538755.1\| PREDICTED: anthranilate N-benzoyltransferase protein 2-like [Glycine max]	Back alignment and taxonomy information

>gi\|357482175\|ref\|XP_003611373.1\| Omega-hydroxypalmitate O-feruloyl transferase [Medicago truncatula] gi\|355512708\|gb\|AES94331.1\| Omega-hydroxypalmitate O-feruloyl transferase [Medicago truncatula]	Back alignment and taxonomy information

>gi\|296085722\|emb\|CBI29522.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|15242562\|ref\|NP_195909.1\| HXXXD-type acyl-transferase-like protein [Arabidopsis thaliana] gi\|7413564\|emb\|CAB86043.1\| putative protein [Arabidopsis thaliana] gi\|27311867\|gb\|AAO00899.1\| putative protein [Arabidopsis thaliana] gi\|34098861\|gb\|AAQ56813.1\| At5g02890 [Arabidopsis thaliana] gi\|332003149\|gb\|AED90532.1\| HXXXD-type acyl-transferase-like protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|21537364\|gb\|AAM61705.1\| unknown [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|297810369\|ref\|XP_002873068.1\| hypothetical protein ARALYDRAFT_324948 [Arabidopsis lyrata subsp. lyrata] gi\|297318905\|gb\|EFH49327.1\| hypothetical protein ARALYDRAFT_324948 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|224137916\|ref\|XP_002326472.1\| predicted protein [Populus trichocarpa] gi\|222833794\|gb\|EEE72271.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		371
TAIR\|locus:2151201		353	AT5G02890 "AT5G02890" [Arabido	0.541	0.569	0.524	7.8e-54
TAIR\|locus:2118299		460	AT4G29250 [Arabidopsis thalian	0.447	0.360	0.322	4.9e-12
TAIR\|locus:2119480		428	CER26 "ECERIFERUM 26" [Arabido	0.471	0.408	0.284	1.4e-08
TAIR\|locus:2076136		420	CER26-LIKE "AT3G23840" [Arabid	0.256	0.226	0.36	5.1e-08
TAIR\|locus:2116757		458	BAT1 "BR-related AcylTransfera	0.485	0.393	0.278	1.3e-06
TAIR\|locus:2059109		451	SHT "spermidine hydroxycinnamo	0.385	0.317	0.322	1.7e-06
TAIR\|locus:2046822		451	SDT "spermidine disinapoyl acy	0.420	0.345	0.301	1.7e-05
TAIR\|locus:2065064		433	AT2G40230 [Arabidopsis thalian	0.258	0.221	0.310	7.2e-05
TAIR\|locus:2152763		443	AT5G47980 [Arabidopsis thalian	0.442	0.370	0.300	7.7e-05
TAIR\|locus:2092090		442	AT3G26040 [Arabidopsis thalian	0.336	0.282	0.306	0.0001

TAIR\|locus:2151201 AT5G02890 "AT5G02890" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 520 (188.1 bits), Expect = 7.8e-54, Sum P(2) = 7.8e-54
 Identities = 109/208 (52%), Positives = 135/208 (64%)

Query:    10 KLQIEAVLTVTPFQATDPRQTLRVSVTEPADSGIFRTCLNLILYYNKVVDE--DSGWIVA 67
             K  I  V TV P + T  R+   VSV +P   GIFR  +N++ YY +  D   + GW+VA
Sbjct:     7 KSMIAGVQTVMPVEVTQHREIRSVSVVDPVGVGIFRRTVNIVTYYKEAGDSGGERGWLVA 66

Query:    68 GWIKESLSKVLAEQPMLGGRLRRRED-GNGELEVVSNDSGARLIEAKMAMTLSEFLGSKE 126
             GWIKESL + L EQPML GRLRRR+  GN  LE+V+NDSG R++EAK   +L EFL   +
Sbjct:    67 GWIKESLGRALTEQPMLSGRLRRRKTAGNDGLELVANDSGVRMVEAKFPASLPEFLEMAK 126

Query:   127 RSED-AEAELVFWKDIDEQNPQYSPLFYVQVTNFECGGHSVGISCSIXXXXXXXXXXXXX 185
             R +  AEAE VFWKDIDE  PQYSPLFYVQVTNFE GG+S+GISCSI             
Sbjct:   127 RDKSRAEAETVFWKDIDEDEPQYSPLFYVQVTNFESGGYSIGISCSILIADLFLETGFLT 186

Query:   186 XWADIHSAELAKNDGPNTPIFYLPNLKK 213
              WA I S+ LA+      P+F+LP+LK+
Sbjct:   187 KWAQIQSS-LAQTT--LKPVFHLPSLKQ 211

GO:0005575 "cellular_component" evidence=ND

GO:0016740 "transferase activity" evidence=ISS

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

TAIR\|locus:2118299 AT4G29250 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2119480 CER26 "ECERIFERUM 26" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2076136 CER26-LIKE "AT3G23840" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2116757 BAT1 "BR-related AcylTransferase1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2059109 SHT "spermidine hydroxycinnamoyl transferase" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2046822 SDT "spermidine disinapoyl acyltransferase" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2065064 AT2G40230 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2152763 AT5G47980 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2092090 AT3G26040 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.3.1	LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	fgenesh4_pg.C_LG_III000620	hypothetical protein (347 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		371
pfam02458		432	pfam02458, Transferase, Transferase family	5e-15
PLN03157		447	PLN03157, PLN03157, spermidine hydroxycinnamoyl tr	2e-14
PLN02481		436	PLN02481, PLN02481, Omega-hydroxypalmitate O-ferul	4e-10
PLN02663		431	PLN02663, PLN02663, hydroxycinnamoyl-CoA:shikimate	2e-09
PLN00140		444	PLN00140, PLN00140, alcohol acetyltransferase fami	4e-05

>gnl\|CDD\|217048 pfam02458, Transferase, Transferase family	Back alignment and domain information

 Score = 75.5 bits (186), Expect = 5e-15
 Identities = 54/175 (30%), Positives = 78/175 (44%), Gaps = 13/175 (7%)

Query: 18  TVTPFQATDPRQTLRVSVTEPADSGIFRTCLN--LILYYNKVVDEDSGWIVAGWIKESLS 75
            + P   T P   L +S  +     I +T +      +Y K   E S    +  +K SLS
Sbjct: 10  LIKPSSPT-PNHRLNLSNLDQ----ILQTPVYVKACFFYKKP-SEFSDETPSEKLKTSLS 63

Query: 76  KVLAEQPMLGGRLRRREDGNGELEVVSNDSGARLIEAKMAMTLSEFLGSKERSEDAEAEL 135
           + L     L GRLR      G LE+  ND GA  +EA+  + LS+FL       D   EL
Sbjct: 64  ETLVSYYPLAGRLR---SPGGRLEIDCNDEGADFVEARADVELSDFL--DGEDPDDSLEL 118

Query: 136 VFWKDIDEQNPQYSPLFYVQVTNFECGGHSVGISCSILLADLLLKEDFLKKWADI 190
           +          +  PL  VQVT F+CGG ++G S +  +AD      F+  WA++
Sbjct: 119 LLPDLAVSSEGENWPLLAVQVTKFKCGGFAIGCSVNHAIADGYSLSTFMNSWAEL 173

This family includes a number of transferase enzymes. These include anthranilate N-hydroxycinnamoyl/benzoyltransferase that catalyzes the first committed reaction of phytoalexin biosynthesis. Deacetylvindoline 4-O-acetyltransferase EC:2.3.1.107 catalyzes the last step in vindoline biosynthesis is also a member of this family. The motif HXXXD is probably part of the active site. The family also includes trichothecene 3-O-acetyltransferase. Length = 432

>gnl\|CDD\|178702 PLN03157, PLN03157, spermidine hydroxycinnamoyl transferase; Provisional	Back alignment and domain information

>gnl\|CDD\|215266 PLN02481, PLN02481, Omega-hydroxypalmitate O-feruloyl transferase	Back alignment and domain information

>gnl\|CDD\|166304 PLN02663, PLN02663, hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase	Back alignment and domain information

>gnl\|CDD\|165708 PLN00140, PLN00140, alcohol acetyltransferase family protein; Provisional	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		371
PLN03157		447	spermidine hydroxycinnamoyl transferase; Provision	100.0
PLN02663		431	hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinn	100.0
PLN02481		436	Omega-hydroxypalmitate O-feruloyl transferase	100.0
PLN00140		444	alcohol acetyltransferase family protein; Provisio	100.0
PF02458		432	Transferase: Transferase family; InterPro: IPR0034	100.0
PRK09294		416	acyltransferase PapA5; Provisional	97.54
PF00668		301	Condensation: Condensation domain; InterPro: IPR00	96.92
COG4908		439	Uncharacterized protein containing a NRPS condensa	96.59
PF03007		263	WES_acyltransf: Wax ester synthase-like Acyl-CoA a	96.54
PF07247		480	AATase: Alcohol acetyltransferase; InterPro: IPR01	95.7
TIGR02946		446	acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT. This b	95.13
PRK10252		1296	entF enterobactin synthase subunit F; Provisional	93.26
PRK12467		3956	peptide synthase; Provisional	92.24
PRK12316		5163	peptide synthase; Provisional	91.57
PRK12316		5163	peptide synthase; Provisional	90.18
PRK05691		4334	peptide synthase; Validated	88.04
PRK12467		3956	peptide synthase; Provisional	87.88
PRK05691		4334	peptide synthase; Validated	84.7

>PLN03157 spermidine hydroxycinnamoyl transferase; Provisional	Back alignment and domain information

Probab=100.00  E-value=1.2e-63  Score=499.43  Aligned_cols=338  Identities=22%  Similarity=0.257  Sum_probs=261.7

Q ss_pred             eeEEEEEeEEEeCCCCCCCCCeeeecCCCCCCccccccceeEEEEEeCCCCCCCchhhHHHHHHHHHHhhccccCCCeEE
Q 017451            9 TKLQIEAVLTVTPFQATDPRQTLRVSVTEPADSGIFRTCLNLILYYNKVVDEDSGWIVAGWIKESLSKVLAEQPMLGGRL   88 (371)
Q Consensus         9 ~~V~i~~~~~V~p~~~t~~~~~~~LS~lD~ld~~~~~~~~~~v~~f~~~~~~~~~~~~~~~Lk~sLs~~L~~~p~laGrl   88 (371)
                      |.|+|+++++|+|+.|| +.+.++||+||+   ...++|++.+|||+.++... ...++++||+||+++|++||||||||
T Consensus         1 ~~v~~~~~~~v~Ps~pt-p~~~~~LS~lD~---~~~~~~v~~v~fy~~~~~~~-~~~~~~~Lk~sLs~~L~~fyplAGRl   75 (447)
T PLN03157          1 MVVILKASYTVKPAKPT-WTGRRSLSEWDQ---VGTITHVPTIYFYSPPWNTS-SGSIIEILKDSLSRALVPFYPLAGRL   75 (447)
T ss_pred             CeEEEeccEEECCCCCC-CCCccCCChhhh---ccccccCCEEEEEeCCCccc-cccHHHHHHHHHHHHHhhccccCEEE
Confidence            46999999999999999 556899999886   67789999999998654322 12467999999999999999999999


Q ss_pred             EEecCCCCcEEEEeCCCceeEEEEEecCchhhhcCCCCCChhhhcccccccccCCCCCCCCCceEEEEEEeccCcEEEEc
Q 017451           89 RRREDGNGELEVVSNDSGARLIEAKMAMTLSEFLGSKERSEDAEAELVFWKDIDEQNPQYSPLFYVQVTNFECGGHSVGI  168 (371)
Q Consensus        89 ~~~~~~~g~~~i~~~~~gv~f~~a~~~~~l~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~P~~~vQvt~f~cGG~~lg~  168 (371)
                      +.++  +|+++|+||++||.|+||+++.+++|+.+..+..  .+++|+|..+... +..+.|++++|||+|.|||++||+
T Consensus        76 ~~~~--~g~~~i~c~~~Gv~fveA~~~~~l~~~~~~~~~~--~~~~l~P~~~~~~-~~~~~Pll~vQvT~F~cGG~~lg~  150 (447)
T PLN03157         76 RWIG--GGRLELECNAMGVLLIEAESEAKLDDFGDFSPTP--EFEYLIPSVDYTK-PIHELPLLLVQLTKFSCGGISLGL  150 (447)
T ss_pred             EEcC--CCcEEEEECCCCeEEEEEEeCCcHHHhhccCCCH--HHHhhcCCCCccc-ccccCceEEEEEEEecCCCEEEEE
Confidence            9876  5899999999999999999999999997654433  4667888643321 234579999999999999999999


Q ss_pred             ceeeeecChhhHHHHHHHHHHHHhhhhcCCCCCCCCcccCCCCCCCCCC---CCCC-----CC----CC----CCCCCCe
Q 017451          169 SCSILLADLLLKEDFLKKWADIHSAELAKNDGPNTPIFYLPNLKKPSYS---AALY-----PS----SS----NQNKTWG  232 (371)
Q Consensus       169 ~~~H~v~Dg~~~~~f~~~wa~~~r~~~~~~~~~~~P~~d~~~~~~~~~~---~~~~-----~~----~~----~~~~~~~  232 (371)
                      ++||+++||.|+.+|+++||++|||..    ...+|.+||..+.++...   +...     ..    ..    .....++
T Consensus       151 ~~~H~v~Dg~~~~~fl~aWA~~~rg~~----~~~~P~~dR~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (447)
T PLN03157        151 GISHAVADGQSALHFISEWARIARGEP----LGTVPFLDRKVLRAGEPPLSAPVFDHAEFSHPPLLIGEQDNVEERKKKT  226 (447)
T ss_pred             EeeccccchHhHHHHHHHHHHHhcCCC----CCCCCccCcccccCCCCCCcCCccChhhcccCcccccccccccccccCc
Confidence            999999999999999999999999863    234577777654322110   0000     00    00    0012357


Q ss_pred             eEEEEEeCHHHHhhchhhhh-----------------hHHHHhhHHHHh-----------------hhcCCCCCCCc-cE
Q 017451          233 KTMMFKISDHQNINLENESG-----------------RKLILVCVEDAE-----------------HKVGVKMASKF-PV  277 (371)
Q Consensus       233 ~~~~f~~s~~~l~~LK~~a~-----------------~Al~W~c~~~ar-----------------~r~~p~lp~~y-~~  277 (371)
                      ++++|+|++++|++||++|.                 +|++|+|+++||                 .|++||+|++| ++
T Consensus       227 ~~~~f~fs~~~i~~LK~~a~~~~~~~~~~~~St~dalsA~lWr~~~rAr~~~~~~~~~l~~~vd~R~rl~Pplp~~Y~GN  306 (447)
T PLN03157        227 TVAMLKLSKDQVEKLKDKANESRSSDNGRPYTRYETVAGHVWRSACKARGHEPEQPTALGICVDSRSRMQPPLPDGYFGN  306 (447)
T ss_pred             eEEEEEECHHHHHHHHHhCcccccccCCCCccHHHHHHHHHHHHHHHHccCCCCCceEEEEEecCCCCCCCCCCCCcccc
Confidence            88999999999999998851                 788899999886                 45789999999 34


Q ss_pred             EEe-----e-ccccccccccccccccccccee-------------------e----e-----------------cc-eee
Q 017451          278 FFR-----G-SYDLLKIESCTKHGNKIVGSQL-------------------K----L-----------------KN-QIS  310 (371)
Q Consensus       278 ~~~-----~-~~dl~~~~~~~~~~L~~vA~~i-------------------e----~-----------------~~-~l~  310 (371)
                      ++.     . .+|++     +. +|+.+|+.|                   +    +                 +. ++.
T Consensus       307 ~v~~~~~~~~~~el~-----~~-~l~~~a~~Ir~ai~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  380 (447)
T PLN03157        307 ATLDVIAESTSGELV-----SK-PLGYASSKIREAIEKVTNEYVQSAIDYLKNQEDLTRFQDLHALGGAEGPFYGNPNLG  380 (447)
T ss_pred             eeeeccchhhHHHHh-----hC-CHHHHHHHHHHHHHHhHHHHHHHHHHHHhhCccchhhhcccccccccccccCCCceE
Confidence            332     1 34544     22 455554443                   0    0                 11 578


Q ss_pred             EEeeCCCcceeeccCCCCCcceEEeecccccceEEEEecCCCCCCCCceEEEEEcCCCCC
Q 017451          311 TARWDDLGANEIAFGQGNKPARVTNWIGSVCDGLVMATPSSSVEGTCELNVIVSIPCEKL  370 (371)
Q Consensus       311 ~ssw~~~~~y~~DFG~G~~P~~v~~~~~~~~~g~v~v~p~~~~~g~g~~~V~v~L~~~~m  370 (371)
                      +|||.+|++|++||||| ||.++++.. ...+|.++++|++  +++|+|+|.|+|++++|
T Consensus       381 vssw~~~~~y~~DFGwG-kp~~~~p~~-~~~~g~~~l~~~~--~~~g~iev~v~L~~~~M  436 (447)
T PLN03157        381 VVSWLTLPIYGLDFGWG-KEIYMGPGT-HDFDGDSLLLPGQ--NEDGSVILALCLQVAHM  436 (447)
T ss_pred             EeecccCCccccccCCC-ccceecccc-cCCCceEEEeecC--CCCCcEEEEEEcCHHHH
Confidence            99999999999999999 999988643 3568999999985  57788999999999998

>PLN02663 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase	Back alignment and domain information

>PLN02481 Omega-hydroxypalmitate O-feruloyl transferase	Back alignment and domain information

>PLN00140 alcohol acetyltransferase family protein; Provisional	Back alignment and domain information

>PF02458 Transferase: Transferase family; InterPro: IPR003480 This family includes a number of transferase enzymes	Back alignment and domain information

>PRK09294 acyltransferase PapA5; Provisional	Back alignment and domain information

>PF00668 Condensation: Condensation domain; InterPro: IPR001242 This domain is found in many multi-domain enzymes which synthesize peptide antibiotics	Back alignment and domain information

>COG4908 Uncharacterized protein containing a NRPS condensation (elongation) domain [General function prediction only]	Back alignment and domain information

>PF03007 WES_acyltransf: Wax ester synthase-like Acyl-CoA acyltransferase domain; InterPro: IPR004255 This entry represents the N terminus (approximately 170 residues) of a number of hypothetical plant proteins	Back alignment and domain information

>PF07247 AATase: Alcohol acetyltransferase; InterPro: IPR010828 This family contains a number of alcohol acetyltransferase (2	Back alignment and domain information

>TIGR02946 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT	Back alignment and domain information

>PRK10252 entF enterobactin synthase subunit F; Provisional	Back alignment and domain information

>PRK12467 peptide synthase; Provisional	Back alignment and domain information

>PRK12316 peptide synthase; Provisional	Back alignment and domain information

>PRK12316 peptide synthase; Provisional	Back alignment and domain information

>PRK05691 peptide synthase; Validated	Back alignment and domain information

>PRK12467 peptide synthase; Provisional	Back alignment and domain information

>PRK05691 peptide synthase; Validated	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		371
4g0b_A		436	Structure Of Native Hct From Coffea Canephora Lengt		2e-04
4g2m_A		439	Structure Of A Lys-Hct Mutant From Coffea Canephora		2e-04
2bgh_A		421	Crystal Structure Of Vinorine Synthase Length = 421		5e-04

>pdb|4G0B|A Chain A, Structure Of Native Hct From Coffea Canephora Length = 436

Back alignment and structure

Iteration: 1

Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 5/129 (3%) Query: 62 SGWIVAGWIKESLSKVLAEQPMLGGRLRRREDGNGELEVVSNDSGARLIEAKMAMTLSEF 121 S + A +K++LS+ L + GRL+R EDG E+E N G +EA+ + +F Sbjct: 50 SNFFDAKVLKDALSRALVPFYPMAGRLKRDEDGRIEIEC--NGEGVLFVEAESDGVVDDF 107 Query: 122 LGSKERSEDAEAELVFWKDIDEQNPQYSPLFYVQVTNFECGGHSVGISCSIXXXXXXXXX 181 E L+ D + Y+ L +QVT F+CGG S+G+ Sbjct: 108 GDFAPTLE--LRRLIPAVDYSQGISSYA-LLVLQVTYFKCGGVSLGVGMRHHAADGFSGL 164 Query: 182 XXXXXWADI 190 W+D+ Sbjct: 165 HFINSWSDM 173

PyMOL of 4g0b

>pdb|4G2M|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora (Crystal Form 2) Length = 439

Back alignment and structure

>pdb|2BGH|A Chain A, Crystal Structure Of Vinorine Synthase Length = 421

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		371
4g22_A		439	Hydroxycinnamoyl-COA shikimate/quinate hydroxycinn	1e-26
2e1v_A		454	Acyl transferase; BAHD superfamily, seleno-methion	2e-22
2bgh_A		421	Vinorine synthase; VS, BAHD, acetyltransferase, au	5e-22
2xr7_A		453	Malonyltransferase; xenobiotics, naphthols; HET: M	6e-20
2rkv_A		451	Trichothecene 3-O-acetyltransferase; BAHD superfam	8e-12
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-04

>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A Length = 439	Back alignment and structure

 Score =  109 bits (273), Expect = 1e-26
 Identities = 57/250 (22%), Positives = 97/250 (38%), Gaps = 28/250 (11%)

Query: 8   STKLQIEAVLTVTPFQATDPRQTLRVSVTEPADSGIFRTCLNLILYYNKVVDEDSGWIVA 67
           S K++++    V P Q T P + L  S     D  +       + +Y       S +  A
Sbjct: 5   SMKIEVKESTMVRPAQET-PGRNLWNS---NVDLVVPNFHTPSVYFYRP--TGSSNFFDA 58

Query: 68  GWIKESLSKVLAEQPMLGGRLRRREDGNGELEVVSNDSGARLIEAKMAMTLSEFLGSKER 127
             +K++LS+ L     + GRL+   D +G +E+  N  G   +EA+    + +F      
Sbjct: 59  KVLKDALSRALVPFYPMAGRLK--RDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAPT 116

Query: 128 SEDAEAELVFWKDIDEQNPQYSPLFYVQVTNFECGGHSVGISCSILLAD---LLLKEDFL 184
            E     L+   D   Q      L  +QVT F+CGG S+G+      AD    L    F+
Sbjct: 117 LE--LRRLIPAVD-YSQGISSYALLVLQVTYFKCGGVSLGVGMRHHAADGFSGL---HFI 170

Query: 185 KKWADI-----------HSAELAKNDGPNTPIFYLPNLKKPSYSAALYPSSSNQNKTWGK 233
             W+D+               L +   P  P F     + P   A    ++++ +     
Sbjct: 171 NSWSDMARGLDVTLPPFIDRTLLRARDPPQPQFQHIEYQPPPALAVSPQTAASDSVPETA 230

Query: 234 TMMFKISDHQ 243
             +FK++  Q
Sbjct: 231 VSIFKLTREQ 240

PyMOL of 4g22

>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A Length = 454	Back alignment and structure

>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina} Length = 421	Back alignment and structure

>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum} Length = 453	Back alignment and structure

>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A* Length = 451	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		371
4g22_A		439	Hydroxycinnamoyl-COA shikimate/quinate hydroxycinn	100.0
2bgh_A		421	Vinorine synthase; VS, BAHD, acetyltransferase, au	100.0
2e1v_A		454	Acyl transferase; BAHD superfamily, seleno-methion	100.0
2xr7_A		453	Malonyltransferase; xenobiotics, naphthols; HET: M	100.0
2rkv_A		451	Trichothecene 3-O-acetyltransferase; BAHD superfam	100.0
1q9j_A		422	PAPA5, polyketide synthase associated protein 5; c	97.7
4hvm_A		493	Tlmii; PSI-biology, midwest center for structural	96.23
2jgp_A		520	Tyrocidine synthetase 3; multifunctional enzyme, a	96.04
1l5a_A		436	Amide synthase, VIBH; nonribosomal peptide synthet	95.79
2xhg_A		466	Tyrocidine synthetase A; isomerase, nonribosomal p	95.43
2vsq_A		1304	Surfactin synthetase subunit 3; ligase, peptidyl c	94.29
3fot_A		519	15-O-acetyltransferase; fusarium head blight, tric	83.48

>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A	Back alignment and structure

Probab=100.00  E-value=2.4e-65  Score=509.70  Aligned_cols=340  Identities=22%  Similarity=0.299  Sum_probs=265.2

Q ss_pred             CcceeEEEEEeEEEeCCCCCCCCCeeeecCCCCCCccccccceeEEEEEeCCCCCCCchhhHHHHHHHHHHhhccccCCC
Q 017451            6 LVSTKLQIEAVLTVTPFQATDPRQTLRVSVTEPADSGIFRTCLNLILYYNKVVDEDSGWIVAGWIKESLSKVLAEQPMLG   85 (371)
Q Consensus         6 ~~~~~V~i~~~~~V~p~~~t~~~~~~~LS~lD~ld~~~~~~~~~~v~~f~~~~~~~~~~~~~~~Lk~sLs~~L~~~p~la   85 (371)
                      |+.++|+|+++++|+|+.+| +.+.++||+||+   .+.++|++.+|||+.++..  ....+++||+||+++|++|||||
T Consensus         3 m~~~~V~i~~~~~V~P~~~t-p~~~~~LS~lD~---~~~~~~~~~~~~y~~~~~~--~~~~~~~Lk~sLs~~L~~f~plA   76 (439)
T 4g22_A            3 MGSMKIEVKESTMVRPAQET-PGRNLWNSNVDL---VVPNFHTPSVYFYRPTGSS--NFFDAKVLKDALSRALVPFYPMA   76 (439)
T ss_dssp             ---CCEEEEEEEEECCSSCC-CCCEECCCHHHH---SCCTTCCCEEEEECCCSCT--TTTCHHHHHHHHHHHTTTTGGGG
T ss_pred             CCceEEEEeeeEEEeCCCCC-CCCeecCChhHh---CccccceeeEEEEcCCCCc--cccHHHHHHHHHHHHHhhccccc
Confidence            56689999999999999999 577999999776   6778899999999975432  23578999999999999999999


Q ss_pred             eEEEEecCCCCcEEEEeCCCceeEEEEEecCchhhhcCCCCCChhhhcccccccccCCCCCCCCCceEEEEEEeccCcEE
Q 017451           86 GRLRRREDGNGELEVVSNDSGARLIEAKMAMTLSEFLGSKERSEDAEAELVFWKDIDEQNPQYSPLFYVQVTNFECGGHS  165 (371)
Q Consensus        86 Grl~~~~~~~g~~~i~~~~~gv~f~~a~~~~~l~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~P~~~vQvt~f~cGG~~  165 (371)
                      |||+.++  +|+++|+||++||.|++|++|.+++|+.+..+..  .+++|+|..+.. .+..+.|++.+|||+|+|||++
T Consensus        77 GRl~~~~--~g~~~i~c~~~Gv~fv~A~~d~~l~~l~~~~p~~--~~~~l~p~~~~~-~~~~~~pll~vQvT~f~cGG~~  151 (439)
T 4g22_A           77 GRLKRDE--DGRIEIECNGEGVLFVEAESDGVVDDFGDFAPTL--ELRRLIPAVDYS-QGISSYALLVLQVTYFKCGGVS  151 (439)
T ss_dssp             CEEEECT--TSCEEEECCCCCEEEEEEEESSCGGGGTTCCCCG--GGGGGSCCCCTT-SCTTSSCSEEEEEEECTTSCEE
T ss_pred             eeeeeCC--CCCEEEEECCCCCEEEEEEcCCcHHHhcCCCCCH--HHHhcCCCCCcc-cccccCceeEEEEEEecCCCEE
Confidence            9999886  4899999999999999999999999997654332  466788864432 2345789999999999999999


Q ss_pred             EEcceeeeecChhhHHHHHHHHHHHHhhhhcCCCCCCCCcccCCCCCCC--CCCC--C--CCCC----CCC----CCC-C
Q 017451          166 VGISCSILLADLLLKEDFLKKWADIHSAELAKNDGPNTPIFYLPNLKKP--SYSA--A--LYPS----SSN----QNK-T  230 (371)
Q Consensus       166 lg~~~~H~v~Dg~~~~~f~~~wa~~~r~~~~~~~~~~~P~~d~~~~~~~--~~~~--~--~~~~----~~~----~~~-~  230 (371)
                      ||+++||+++||.|+.+|+++||++|||..    ...+|.|||..+++.  +...  .  ....    ...    ..+ .
T Consensus       152 lg~~~~H~v~Dg~~~~~Fl~~wa~~~rg~~----~~~~P~~dr~~l~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (439)
T 4g22_A          152 LGVGMRHHAADGFSGLHFINSWSDMARGLD----VTLPPFIDRTLLRARDPPQPQFQHIEYQPPPALAVSPQTAASDSVP  227 (439)
T ss_dssp             EEEEECTTTCCHHHHHHHHHHHHHHHTTCC----CSSCCBCCGGGGCCCSSCCCSSCCGGGSCCC---------------
T ss_pred             EEEEeeeccCcHHHHHHHHHHHHHHhCCCC----CCCCCccccccccCCCCCCCCcCcccccCCCCCcccccccccCCcc
Confidence            999999999999999999999999999863    235677887654321  1100  0  0000    000    111 4


Q ss_pred             CeeEEEEEeCHHHHhhchhhhh--------------hHHHHhhHHHHh-----------------hhcCCCCCCCc-cEE
Q 017451          231 WGKTMMFKISDHQNINLENESG--------------RKLILVCVEDAE-----------------HKVGVKMASKF-PVF  278 (371)
Q Consensus       231 ~~~~~~f~~s~~~l~~LK~~a~--------------~Al~W~c~~~ar-----------------~r~~p~lp~~y-~~~  278 (371)
                      ++++++|+|++++|++||++|.              +|++|||+++||                 .|++||+|++| +++
T Consensus       228 ~~~~~~f~fs~~~i~~LK~~a~~~~~~~~~St~dal~A~iWr~~~rAr~~~~~~~~~l~~~vd~R~rl~Pplp~~Y~GN~  307 (439)
T 4g22_A          228 ETAVSIFKLTREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKARGLEVDQGTKLYIATDGRARLRPSLPPGYFGNV  307 (439)
T ss_dssp             CEEEEEEEECHHHHHHHHHGGGGGGCCCCCCHHHHHHHHHHHHHHHHTTCCTTCEEEEEEEEECTTTSSSCCCTTBCSCC
T ss_pred             cceEEEEEECHHHHHHHHHHhhccCCCCCccHHHHHHHHHHHHHHHhcCCCCCCcEEEEEEEcccCCCCCCCCCCcccce
Confidence            6899999999999999998872              788899999986                 46789999999 333


Q ss_pred             Ee-----e-ccccccccccccccccccccee-------------------e-------e-------cc-eeeEEeeCCCc
Q 017451          279 FR-----G-SYDLLKIESCTKHGNKIVGSQL-------------------K-------L-------KN-QISTARWDDLG  318 (371)
Q Consensus       279 ~~-----~-~~dl~~~~~~~~~~L~~vA~~i-------------------e-------~-------~~-~l~~ssw~~~~  318 (371)
                      +.     . ++||+     .. +|+++|..|                   +       +       .. ++.+|||.+++
T Consensus       308 v~~~~~~~~~~el~-----~~-~L~~~A~~Ir~ai~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vssw~r~~  381 (439)
T 4g22_A          308 IFTATPIAIAGDLE-----FK-PVWYAASKIHDALARMDNDYLRSALDYLELQPDLKALVRGAHTFKCPNLGITSWVRLP  381 (439)
T ss_dssp             EEEECCEEEHHHHH-----HS-CHHHHHHHHHHHHHTCSHHHHHHHHHHHHTCSCSTTCCCCHHHHCTTCEEEEECTTSC
T ss_pred             eehhhcceEHHHHh-----hC-cHHHHHHHHHHHHHhhCHHHHHHHHHHHHhCccchhhcccCCcCcCCcEEEeecCcCC
Confidence            32     1 45654     33 566665554                   0       0       12 78999999999


Q ss_pred             ceeeccCCCCCcceEEeecccccceEEEEecCCCCCCCCceEEEEEcCCCCC
Q 017451          319 ANEIAFGQGNKPARVTNWIGSVCDGLVMATPSSSVEGTCELNVIVSIPCEKL  370 (371)
Q Consensus       319 ~y~~DFG~G~~P~~v~~~~~~~~~g~v~v~p~~~~~g~g~~~V~v~L~~~~m  370 (371)
                      +|++||||| ||+++++.. ...+|.++++|.+  +++|+++|.|||++++|
T Consensus       382 ~y~~DFGwG-kP~~~~~~~-~~~~g~~~~~p~~--~~~ggi~v~v~L~~~~m  429 (439)
T 4g22_A          382 IHDADFGWG-RPIFMGPGG-IAYEGLSFILPSP--TNDGSMSVAISLQGEHM  429 (439)
T ss_dssp             TTCCCCSSC-CCSEEEESS-CCSTTEEEEEECT--TCSSCEEEEEEEEHHHH
T ss_pred             ccccccCCC-Ccceeeccc-cCCCcEEEEeecC--CCCCcEEEEEECCHHHH
Confidence            999999999 999998654 4568999999985  57788999999999887

PyMOL of 4g22

>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}	Back alignment and structure

>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A	Back alignment and structure

>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}	Back alignment and structure

>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*	Back alignment and structure

>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2	Back alignment and structure

>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}	Back alignment and structure

>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}	Back alignment and structure

>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2	Back alignment and structure

>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}	Back alignment and structure

>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}	Back alignment and structure

>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		371
d1q9ja1		175	Polyketide synthase associated protein 5, PapA5 {M	97.53
d1l5aa1		174	VibH {Vibrio cholerae [TaxId: 666]}	97.2

>d1q9ja1 c.43.1.2 (A:1-175) Polyketide synthase associated protein 5, PapA5 {Mycobacterium tuberculosis [TaxId: 1773]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: CoA-dependent acyltransferases
superfamily: CoA-dependent acyltransferases
family: NRPS condensation domain (amide synthase)
domain: Polyketide synthase associated protein 5, PapA5
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.53  E-value=0.00034  Score=57.35  Aligned_cols=121  Identities=14%  Similarity=0.119  Sum_probs=71.1

Q ss_pred             EEEEeCCCCCCCchhhHHHHHHHHHHhhccccCCCeEEEEecCCCCcEEEEeCCC-ceeEEEEEecCchhhhcCCCCCCh
Q 017451           51 ILYYNKVVDEDSGWIVAGWIKESLSKVLAEQPMLGGRLRRREDGNGELEVVSNDS-GARLIEAKMAMTLSEFLGSKERSE  129 (371)
Q Consensus        51 v~~f~~~~~~~~~~~~~~~Lk~sLs~~L~~~p~laGrl~~~~~~~g~~~i~~~~~-gv~f~~a~~~~~l~~~~~~~~~~~  129 (371)
                      .+.|+....     ..++.|++++..++..++-|-.+++.++  +|.+....... -..+...+.  +-.+.     .. 
T Consensus        25 ~~~~~l~g~-----ld~~~l~~A~~~lv~rh~~LRt~f~~~~--~~~~~~~~~~~~~~~~~~~d~--~~~~~-----~~-   89 (175)
T d1q9ja1          25 SMTIQLRGV-----IDVDALSDAFDALLETHPVLASHLEQSS--DGGWNLVADDLLHSGICVIDG--TAATN-----GS-   89 (175)
T ss_dssp             EEEEEEESC-----CCHHHHHHHHHHHHHHCGGGSEEEEECT--TSSEEEEECCSSSCCCEEEC----------------
T ss_pred             EEEEEEcCC-----CCHHHHHHHHHHHHHhchhheEEEEEeC--CeeEEEEECCCCCccEEEEEc--ccchh-----HH-
Confidence            344555433     4588999999999999999999998765  34444333221 111111111  10000     00 


Q ss_pred             hhhcccccccccCCCCCCCCCceEEEEEEeccCcEEEEcceeeeecChhhHHHHHHHHHHHHhhh
Q 017451          130 DAEAELVFWKDIDEQNPQYSPLFYVQVTNFECGGHSVGISCSILLADLLLKEDFLKKWADIHSAE  194 (371)
Q Consensus       130 ~~~~~l~p~~~~~~~~~~~~P~~~vQvt~f~cGG~~lg~~~~H~v~Dg~~~~~f~~~wa~~~r~~  194 (371)
                        .....+.     +-..+.|+..+.+. ..+++..|.+.+||.++||.|+..|++.+.+.....
T Consensus        90 --~~~~~~~-----~l~~~~~l~~~~i~-~~~~~~~l~l~~HH~i~Dg~S~~~ll~el~~~Y~~~  146 (175)
T d1q9ja1          90 --PSGNAEL-----RLDQSVSLLHLQLI-LREGGAELTLYLHHCMADGHHGAVLVDELFSRYTDA  146 (175)
T ss_dssp             ------CCC-----CCCTTTCSEEEEEE-CCSSSCEEEEEEEGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred             --HHhhccc-----CccCCCCeEEEEEE-ecCCeEEEEEEccccccCHhHHHHHHHHHHHHHHHH
Confidence              0000111     01123455554443 335788899999999999999999999998887643

PyMOL of d1q9ja1

>d1l5aa1 c.43.1.2 (A:1-174) VibH {Vibrio cholerae [TaxId: 666]}	Back information, alignment and structure