Citrus Sinensis ID: 017455
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 371 | 2.2.26 [Sep-21-2011] | |||||||
| P40119 | 254 | Protein CbbY, chromosomal | yes | no | 0.315 | 0.460 | 0.352 | 7e-10 | |
| Q04541 | 254 | Protein CbbY, plasmid OS= | yes | no | 0.315 | 0.460 | 0.344 | 1e-09 | |
| P95649 | 230 | Protein CbbY OS=Rhodobact | yes | no | 0.301 | 0.486 | 0.303 | 4e-06 | |
| O33513 | 227 | Protein CbbY OS=Rhodobact | yes | no | 0.301 | 0.493 | 0.336 | 7e-05 |
| >sp|P40119|CBBYC_CUPNH Protein CbbY, chromosomal OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbYC PE=3 SV=3 | Back alignment and function desciption |
|---|
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
A++ +VDG L D + QAFN AF ++GLD W AP+YT LL K AG ++R++ +
Sbjct: 3 ALIFDVDGTLADT-ESAHLQAFNAAFAEVGLDW-YWDAPLYTRLL-KVAGGKERLM--HY 57
Query: 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIV 205
R+ P + K + V K E + + PLRPG+ +D+A G+PL +
Sbjct: 58 WRMVDPEEARGCKVKETIDAVHAIKTRHYAERVGAGGLPLRPGIARLIDEAGEAGLPLAI 117
Query: 206 LT 207
T
Sbjct: 118 AT 119
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Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (taxid: 381666) |
| >sp|Q04541|CBBYP_CUPNH Protein CbbY, plasmid OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbYP PE=3 SV=1 | Back alignment and function description |
|---|
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
A++ +VDG L D + QAFN AF ++GLD +W AP+YT LL K AG ++R++ +
Sbjct: 3 ALIFDVDGTLADT-ETAHLQAFNAAFAEVGLDW-HWDAPLYTRLL-KVAGGKERLM--HY 57
Query: 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIV 205
R+ P + K + V K E + + PLRPG+ + +A G+PL +
Sbjct: 58 WRMVDPEEARGCKVKETIDAVHAIKTRHYAERVGAGGLPLRPGIARLIAEAGEAGLPLAI 117
Query: 206 LT 207
T
Sbjct: 118 AT 119
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Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (taxid: 381666) |
| >sp|P95649|CBBY_RHOSH Protein CbbY OS=Rhodobacter sphaeroides GN=cbbY PE=3 SV=1 | Back alignment and function description |
|---|
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 10/122 (8%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
A+L +VDG L + +R+AFN F LG+D W Y +LL + G E R+
Sbjct: 4 AILFDVDGTLAETEEL-HRRAFNETFAALGVDW-FWDREEYRELLTTTGGKE-RIARFLR 60
Query: 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIV 205
++ G P +P + ++ + K +A + LRPG+ D + +A GI L V
Sbjct: 61 HQKGDPAPLP-------IADIHRAKTERFVALMAEGEIALRPGIADLIAEAKRAGIRLAV 113
Query: 206 LT 207
T
Sbjct: 114 AT 115
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Rhodobacter sphaeroides (taxid: 1063) |
| >sp|O33513|CBBY_RHOCA Protein CbbY OS=Rhodobacter capsulatus GN=cbbY PE=3 SV=1 | Back alignment and function description |
|---|
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 10/122 (8%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
A++ +VDG L + +RQAFN F GLD W+ Y LLR + G E RM
Sbjct: 5 ALIFDVDGTLAETEEV-HRQAFNETFAAQGLDW-YWSKEDYRTLLRTTGGKE-RMAKHRE 61
Query: 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIV 205
N +G S P++ K + ++ + K E +AS L PGV + +D A G+ L +
Sbjct: 62 N-LG---SGPSDAK---IADLHKAKTQRYVEIIASGQVGLLPGVAELIDRAKASGLRLAI 114
Query: 206 LT 207
T
Sbjct: 115 AT 116
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Rhodobacter capsulatus (taxid: 1061) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 371 | ||||||
| 255549546 | 340 | 2-deoxyglucose-6-phosphate phosphatase, | 0.908 | 0.991 | 0.689 | 1e-130 | |
| 224134306 | 380 | predicted protein [Populus trichocarpa] | 0.938 | 0.915 | 0.652 | 1e-119 | |
| 225465107 | 376 | PREDICTED: uncharacterized protein LOC10 | 0.889 | 0.877 | 0.611 | 1e-113 | |
| 296081418 | 367 | unnamed protein product [Vitis vinifera] | 0.889 | 0.899 | 0.611 | 1e-113 | |
| 297791273 | 372 | hypothetical protein ARALYDRAFT_494462 [ | 0.897 | 0.895 | 0.576 | 1e-110 | |
| 30694711 | 372 | CbbY protein-like protein [Arabidopsis t | 0.900 | 0.897 | 0.569 | 1e-109 | |
| 356555851 | 374 | PREDICTED: uncharacterized protein LOC10 | 0.752 | 0.745 | 0.677 | 1e-109 | |
| 356532993 | 371 | PREDICTED: uncharacterized protein LOC10 | 0.752 | 0.752 | 0.673 | 1e-108 | |
| 449433515 | 374 | PREDICTED: uncharacterized protein LOC10 | 0.797 | 0.791 | 0.640 | 1e-107 | |
| 414869086 | 418 | TPA: hypothetical protein ZEAMMB73_04861 | 0.749 | 0.665 | 0.664 | 1e-105 |
| >gi|255549546|ref|XP_002515825.1| 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis] gi|223545054|gb|EEF46567.1| 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 235/341 (68%), Positives = 278/341 (81%), Gaps = 4/341 (1%)
Query: 6 TSCSLLNSLRFSTAITVSKKSYYHYQATQLRNHNCLSPFPSFSSTFPRNYNFHGKCLHVN 65
+SCS+L SLR S ++ + + Q T RN N PSFS +FPRNY GK L N
Sbjct: 4 SSCSILYSLRLSNNF-INYNNKFCSQ-TLPRNCNSFCLGPSFSFSFPRNYKIPGKFLQPN 61
Query: 66 PFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPI 125
++F+SSS QNP +LAVLLEVDGVL+D YR GNRQAFN+AFQKLGLDCANWT PI
Sbjct: 62 GLASFTSSS--PDQNPSLELAVLLEVDGVLMDVYRLGNRQAFNIAFQKLGLDCANWTEPI 119
Query: 126 YTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPL 185
Y DL+RKSAGDE+RMLVLFFNRIGWPTS+PT+EK FV N+LQEKKNA+DEF+ SK APL
Sbjct: 120 YLDLVRKSAGDEERMLVLFFNRIGWPTSLPTSEKGTFVNNILQEKKNAMDEFVMSKSAPL 179
Query: 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLY 245
RPG EDF+DDA NEGIP+++LT+Y KS ++IARS+V+KLG ERI KIKIVG+ EV++SLY
Sbjct: 180 RPGAEDFIDDASNEGIPVVILTSYNKSEEKIARSIVDKLGPERILKIKIVGDAEVKQSLY 239
Query: 246 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAA 305
GQ VLGKG+ SG+DEQLA EARKA SA++Q+IAEEVASMLKLSV IDTSS ESL+KIVAA
Sbjct: 240 GQLVLGKGVLSGLDEQLAKEARKAASAERQKIAEEVASMLKLSVQIDTSSSESLEKIVAA 299
Query: 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 346
LRAGAEYA V NC LIAGSQSGV+ A++IGMPC+V+RSR
Sbjct: 300 LRAGAEYAGLRVSNCVLIAGSQSGVSAAEKIGMPCIVLRSR 340
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224134306|ref|XP_002321787.1| predicted protein [Populus trichocarpa] gi|222868783|gb|EEF05914.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 238/365 (65%), Positives = 284/365 (77%), Gaps = 17/365 (4%)
Query: 1 MKTSSTSCSLLNSLRFSTAITVSKKSYY--HYQATQLRNHNCLSPFPS------FSSTFP 52
M+ +++SCS+L+ LR S +Y+ HY T RN + S + FSSTF
Sbjct: 1 MEAAASSCSILHPLR-------SSSNYHSKHYTETPPRNSSSSSCCNNLYLGLPFSSTFL 53
Query: 53 RNYNFHGKCLHVNPFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQ 112
RNY F GK + N F+ F + QNP + AVLLEVDGVL+DAYR GNR+AFNVAFQ
Sbjct: 54 RNYTFPGKFVQQNLFTTFCLTPSSSKQNPSTEFAVLLEVDGVLIDAYRLGNRRAFNVAFQ 113
Query: 113 KLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKN 172
KLGLDCANWT PIY DL+RKS GDE+RMLVLFFNRIGWPTS+PT+EK AF+K+VL+EKKN
Sbjct: 114 KLGLDCANWTQPIYQDLVRKSDGDEERMLVLFFNRIGWPTSLPTSEKGAFIKSVLREKKN 173
Query: 173 ALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI 232
ALDEF+ASK + LRPGVEDF+DDA N+GIP+++LTAYGKS ++IARS+++KLG ERISK+
Sbjct: 174 ALDEFVASKSSLLRPGVEDFIDDASNKGIPVVILTAYGKSVEKIARSIIDKLGHERISKL 233
Query: 233 KIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDID 292
KIVGNEEVE+SLYGQ V KGI SG +E+LA EA KAVSAQKQ+IAEEVASMLKLSV +D
Sbjct: 234 KIVGNEEVEKSLYGQLVHHKGILSGTNEELAKEAMKAVSAQKQKIAEEVASMLKLSVSLD 293
Query: 293 TSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSRCI--TT 350
+SS ESL K VAALRAGAEYA V NC LIAGSQSGVAGA++IGMPCVV+RS T
Sbjct: 294 SSSSESLQKTVAALRAGAEYAGVSVNNCVLIAGSQSGVAGAEQIGMPCVVLRSSSTSRTQ 353
Query: 351 LPVSK 355
P +K
Sbjct: 354 FPSAK 358
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225465107|ref|XP_002271573.1| PREDICTED: uncharacterized protein LOC100253116 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/345 (61%), Positives = 258/345 (74%), Gaps = 15/345 (4%)
Query: 5 STSCSLLNSLRFSTAITVSKKSYYHYQATQLRNHNCLSPFPSFSSTFPRNYNFHGKCL-H 63
+ SCS+L+ L F T S ++ + TQL SF TF N +F K H
Sbjct: 12 TVSCSVLHPLPFFD--TCSYNKHFQFLKTQL----------SFLPTFSTNLHFPRKNFPH 59
Query: 64 VNPFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTA 123
N +AF S H++ NP ++LA+LLEV+GV+VD Y GNR AFN AF+KLGLDCANW
Sbjct: 60 FNGLTAFRSLPPHNNPNPSQELAILLEVEGVIVDVYWMGNRNAFNTAFRKLGLDCANWPE 119
Query: 124 PIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDA 183
P+Y DLLRKSAGDE+RML+LFFN+IGWPTSVPT+E+K F++NVL+EKKNALD+ L SK
Sbjct: 120 PVYLDLLRKSAGDEERMLILFFNKIGWPTSVPTSEQKTFMQNVLREKKNALDDLLVSKGL 179
Query: 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243
PLRPGVEDF+DDAYNEGIPL+VLT +S D++ R + +KLG ERISK+KIVGNEEVE+S
Sbjct: 180 PLRPGVEDFIDDAYNEGIPLLVLTPCCESEDKVRRFIADKLGPERISKVKIVGNEEVEQS 239
Query: 244 LYGQFVL--GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDK 301
YGQ +L GKG+ SGVDEQLA EA KAVSA+KQ IAEEVAS+LKL V+I + E+L K
Sbjct: 240 SYGQIILGIGKGLLSGVDEQLAKEAIKAVSAEKQRIAEEVASILKLKVEIGSGLHENLPK 299
Query: 302 IVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 346
+AAL AG+EYA PV NC LI GSQSGVAGA+R+GMP VV+ SR
Sbjct: 300 TIAALHAGSEYAGVPVNNCVLITGSQSGVAGAERVGMPYVVLHSR 344
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296081418|emb|CBI16769.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/345 (61%), Positives = 258/345 (74%), Gaps = 15/345 (4%)
Query: 5 STSCSLLNSLRFSTAITVSKKSYYHYQATQLRNHNCLSPFPSFSSTFPRNYNFHGKCL-H 63
+ SCS+L+ L F T S ++ + TQL SF TF N +F K H
Sbjct: 3 TVSCSVLHPLPFFD--TCSYNKHFQFLKTQL----------SFLPTFSTNLHFPRKNFPH 50
Query: 64 VNPFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTA 123
N +AF S H++ NP ++LA+LLEV+GV+VD Y GNR AFN AF+KLGLDCANW
Sbjct: 51 FNGLTAFRSLPPHNNPNPSQELAILLEVEGVIVDVYWMGNRNAFNTAFRKLGLDCANWPE 110
Query: 124 PIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDA 183
P+Y DLLRKSAGDE+RML+LFFN+IGWPTSVPT+E+K F++NVL+EKKNALD+ L SK
Sbjct: 111 PVYLDLLRKSAGDEERMLILFFNKIGWPTSVPTSEQKTFMQNVLREKKNALDDLLVSKGL 170
Query: 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243
PLRPGVEDF+DDAYNEGIPL+VLT +S D++ R + +KLG ERISK+KIVGNEEVE+S
Sbjct: 171 PLRPGVEDFIDDAYNEGIPLLVLTPCCESEDKVRRFIADKLGPERISKVKIVGNEEVEQS 230
Query: 244 LYGQFVL--GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDK 301
YGQ +L GKG+ SGVDEQLA EA KAVSA+KQ IAEEVAS+LKL V+I + E+L K
Sbjct: 231 SYGQIILGIGKGLLSGVDEQLAKEAIKAVSAEKQRIAEEVASILKLKVEIGSGLHENLPK 290
Query: 302 IVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 346
+AAL AG+EYA PV NC LI GSQSGVAGA+R+GMP VV+ SR
Sbjct: 291 TIAALHAGSEYAGVPVNNCVLITGSQSGVAGAERVGMPYVVLHSR 335
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297791273|ref|XP_002863521.1| hypothetical protein ARALYDRAFT_494462 [Arabidopsis lyrata subsp. lyrata] gi|297309356|gb|EFH39780.1| hypothetical protein ARALYDRAFT_494462 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/340 (57%), Positives = 259/340 (76%), Gaps = 7/340 (2%)
Query: 7 SCSLLNSLRFSTAITVSKKSYYHYQATQLRNHNC-LSPFPSFSSTFPRNYNFHGKCLHVN 65
SCS+L++L+ S +K S + ++ +H+ F SFS+ FP GKCL +
Sbjct: 5 SCSILDNLQLSC----TKTSLFTQYLSEPSSHDTGRRNFLSFSN-FPGKSQILGKCLRLQ 59
Query: 66 PFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPI 125
FS+ S+ + NP +LAV+LEVDGV++D + NRQAFNVAFQKLGLDCANW P+
Sbjct: 60 RFSSICLSASREDVNPSEELAVILEVDGVMIDTWS-SNRQAFNVAFQKLGLDCANWPEPV 118
Query: 126 YTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPL 185
Y+DLLRK A DE++ML+L+FN+IGWP+S+PT+EK +FVK+VL+EKKNA+DEFL SK PL
Sbjct: 119 YSDLLRKGAADEEKMLLLYFNQIGWPSSLPTSEKASFVKSVLREKKNAMDEFLMSKSLPL 178
Query: 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLY 245
R GV++F+D+AY E +P+ ++TAY KSGD++A S+VE LG ER+ +K++G EVE+S+Y
Sbjct: 179 RSGVQEFIDNAYTERVPVAIVTAYCKSGDKVALSIVEMLGQERLPNVKVIGENEVEQSMY 238
Query: 246 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAA 305
GQ VLGKG+SS ++EQL E +KA SA+KQ IAEEVASMLKLSVDIDT+S E L+KIV A
Sbjct: 239 GQLVLGKGVSSSLEEQLVKEVKKAASAEKQRIAEEVASMLKLSVDIDTTSSERLEKIVVA 298
Query: 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345
LRA AE+ PV+NC L+AGSQ GV+ A+ IGMPCVVMRS
Sbjct: 299 LRAAAEHIGLPVKNCVLVAGSQPGVSAAKMIGMPCVVMRS 338
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|30694711|ref|NP_199330.2| CbbY protein-like protein [Arabidopsis thaliana] gi|44917581|gb|AAS49115.1| At5g45170 [Arabidopsis thaliana] gi|62321581|dbj|BAD95125.1| putative protein [Arabidopsis thaliana] gi|332007829|gb|AED95212.1| CbbY protein-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/339 (56%), Positives = 251/339 (74%), Gaps = 5/339 (1%)
Query: 7 SCSLLNSLRFSTAITVSKKSYYHYQATQLRNHNCLSPFPSFSSTFPRNYNFHGKCLHVNP 66
SCS+LN+L+ S T Y +++ PF S FP GKCL +
Sbjct: 5 SCSILNNLQISCTKTSIFTQYLSERSSHDTGRRNFLPF----SNFPGKSQILGKCLRLQR 60
Query: 67 FSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIY 126
FS+ S+ + NP + AV+LEVD V++D + NRQAFNVAFQKLGLDCANW P+Y
Sbjct: 61 FSSICLSASREDVNPSEEFAVILEVDRVMIDTWS-SNRQAFNVAFQKLGLDCANWPEPVY 119
Query: 127 TDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLR 186
+DLLRK A DE++ML+L+FN+IGWP+S+PT+EK +FVK+VL+EKKNA+DEFL SK PLR
Sbjct: 120 SDLLRKGAADEEKMLLLYFNQIGWPSSLPTSEKASFVKSVLREKKNAMDEFLISKSLPLR 179
Query: 187 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYG 246
GV++F+D+AY E +P+ ++TAY KSGD++A S+VE LG ER+ +K++G+ EVE+S+YG
Sbjct: 180 SGVQEFIDNAYAEKVPVAIVTAYCKSGDKVALSIVEMLGQERLPNVKVIGDNEVEQSMYG 239
Query: 247 QFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAAL 306
Q VLGKG+SS ++EQL E +KA SA+KQ IAEEVASMLKLSVDIDT+S E L+KIV AL
Sbjct: 240 QLVLGKGVSSSLEEQLVKEVKKAASAEKQRIAEEVASMLKLSVDIDTTSSERLEKIVVAL 299
Query: 307 RAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345
RA AE+ PV NC L+AGSQ GV+ A+ IGMPCVVMRS
Sbjct: 300 RAAAEHIGLPVNNCVLVAGSQPGVSAAKMIGMPCVVMRS 338
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356555851|ref|XP_003546243.1| PREDICTED: uncharacterized protein LOC100800683 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/279 (67%), Positives = 236/279 (84%)
Query: 67 FSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIY 126
SA SSS H + + D+AVLLEVDGVL+D++R GNR AFN AF+KLGLDCANWT P+Y
Sbjct: 56 ISASSSSEYHHNSSSSPDIAVLLEVDGVLMDSHRVGNRLAFNKAFEKLGLDCANWTEPVY 115
Query: 127 TDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLR 186
+DL ++SAGDE++M+ L+FNRIGWP+S+PTNE+ F K VLQ+K+ AL+EF+ SK PLR
Sbjct: 116 SDLSKRSAGDEEKMVFLYFNRIGWPSSLPTNEQGLFAKRVLQQKEKALEEFVMSKSLPLR 175
Query: 187 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYG 246
PG+E F+DDAYNEG+P+++LTAYGKSGD I S++EKLG +R K+ IVGN+EVE+SLYG
Sbjct: 176 PGLEQFIDDAYNEGVPVVILTAYGKSGDNITGSIMEKLGDDRSIKVIIVGNKEVEQSLYG 235
Query: 247 QFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAAL 306
Q VLGK I+SG+DE+LA EA++AVSA+KQ +A+EVASMLKLSV+IDTSS ESL KIVAAL
Sbjct: 236 QLVLGKVIASGLDEELANEAKRAVSAEKQRLAKEVASMLKLSVEIDTSSSESLAKIVAAL 295
Query: 307 RAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345
RAGAEYA PV NC L+AGSQSGVAG ++GMPCVV+RS
Sbjct: 296 RAGAEYAGIPVCNCVLVAGSQSGVAGGTQVGMPCVVLRS 334
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356532993|ref|XP_003535053.1| PREDICTED: uncharacterized protein LOC100792632 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 190/282 (67%), Positives = 237/282 (84%), Gaps = 3/282 (1%)
Query: 67 FSAFSSSSGHDSQNPP---RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTA 123
SA SS++ H+ N +DLAVLLEV GVL+D++R GNR AFN AF+KLGLDCANWT
Sbjct: 50 ISASSSTAEHNHPNSSSSSQDLAVLLEVQGVLMDSHRVGNRLAFNKAFEKLGLDCANWTE 109
Query: 124 PIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDA 183
P+Y+DL ++SAGDE++M+ L+FNRIGWP+S+PTNE+ F K VLQ+K+ AL+EF+ SK
Sbjct: 110 PVYSDLSKRSAGDEEKMVFLYFNRIGWPSSLPTNEQGLFAKRVLQQKEKALEEFVMSKSL 169
Query: 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243
PLRPG+E F+DDAYNEGIP+++LTAY KSGD IARS++EKLG +R K+ IVGN+EVE+S
Sbjct: 170 PLRPGLEQFIDDAYNEGIPVVILTAYSKSGDNIARSIMEKLGDDRSIKVIIVGNKEVEQS 229
Query: 244 LYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIV 303
LYGQ V GK I+SG+DE+LA EA++AVSA+KQ +A+EVASMLKLSV+IDT S ESL KIV
Sbjct: 230 LYGQLVSGKVIASGLDEELAKEAKRAVSAEKQRLAKEVASMLKLSVEIDTGSSESLAKIV 289
Query: 304 AALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345
AALRAGAEYA PV NC L+AGSQSGVAGA ++GMPCVV+RS
Sbjct: 290 AALRAGAEYAGIPVCNCVLVAGSQSGVAGATQVGMPCVVLRS 331
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Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449433515|ref|XP_004134543.1| PREDICTED: uncharacterized protein LOC101206737 [Cucumis sativus] gi|449506776|ref|XP_004162845.1| PREDICTED: uncharacterized protein LOC101226823 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/298 (64%), Positives = 248/298 (83%), Gaps = 2/298 (0%)
Query: 49 STFPRNYNFH-GKCLHVNPFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAF 107
S F R+YNF L + +AFSSSS ++ +P ++LAVLLEV+GVLVDAYR NRQAF
Sbjct: 44 SVFSRSYNFIVDSSLRIRRLTAFSSSSSSNNDSP-QELAVLLEVEGVLVDAYRSTNRQAF 102
Query: 108 NVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVL 167
N AF+KLGLDCANWT P+Y+DL+RK+A +E+RML+++FNRIGWPTS+PTNEK++F+K+VL
Sbjct: 103 NEAFRKLGLDCANWTEPVYSDLVRKNAANEERMLIMYFNRIGWPTSLPTNEKESFIKSVL 162
Query: 168 QEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227
+EKK A DE + S+ PLRPGVEDF+D+A+NEGIP+I+LTAY KSG+ IARS++ KLG E
Sbjct: 163 REKKKASDELMVSQSLPLRPGVEDFIDNAHNEGIPVIILTAYSKSGEEIARSIINKLGPE 222
Query: 228 RISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKL 287
RISK+KIVGNEE+ +SLY +FV G+ SG++E+LA EA KA SA+KQ IA++VAS LKL
Sbjct: 223 RISKVKIVGNEEMRQSLYSEFVSGQAKQSGLEEELAKEAMKAASAEKQRIAKKVASALKL 282
Query: 288 SVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345
SV+I+T+S ESLDKI+ ALRAG+E A PV NC L+AG+QSG+ GA+RIGMP +V+RS
Sbjct: 283 SVEINTTSSESLDKIICALRAGSELAGTPVSNCILVAGTQSGIDGAERIGMPRIVIRS 340
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Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|414869086|tpg|DAA47643.1| TPA: hypothetical protein ZEAMMB73_048619 [Zea mays] | Back alignment and taxonomy information |
|---|
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/280 (66%), Positives = 226/280 (80%), Gaps = 2/280 (0%)
Query: 66 PFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPI 125
P F SS + PRDL +LLEV+GVL D YRFGNRQAFNVAF+ LGLDCANWT PI
Sbjct: 107 PAPPFRCSSSSPENSAPRDLGLLLEVEGVLADVYRFGNRQAFNVAFRSLGLDCANWTEPI 166
Query: 126 YTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPL 185
Y DL+RK+ GDE+RML LFF+RIGWPTS+PT+EK +F+K+VL+EK AL+EF AS PL
Sbjct: 167 YADLVRKACGDEERMLALFFDRIGWPTSLPTSEKGSFIKSVLREKLKALEEFSASDSLPL 226
Query: 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLY 245
RPGVE F+DDA EG+PL +L AYG++G++I+RS+ KLG ERISKIKIVGN EVE S Y
Sbjct: 227 RPGVEKFIDDALGEGVPLAILAAYGRNGEKISRSIAMKLGPERISKIKIVGNVEVEESFY 286
Query: 246 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAA 305
GQ VLGKG++SG+DEQL EA+KA SA+KQ IAE+VAS+LKLSVDI S ES DK++AA
Sbjct: 287 GQLVLGKGVTSGLDEQLVREAQKAASAEKQRIAEKVASILKLSVDITAS--ESSDKVIAA 344
Query: 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345
LRAG+EY V++C L+AGSQSGV A+RIGMPC+V+RS
Sbjct: 345 LRAGSEYVGCDVQSCILVAGSQSGVLAAERIGMPCIVVRS 384
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Source: Zea mays Species: Zea mays Genus: Zea Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 371 | ||||||
| TAIR|locus:2153348 | 372 | AT5G45170 "AT5G45170" [Arabido | 0.770 | 0.768 | 0.613 | 2.3e-94 | |
| TAIR|locus:2101165 | 319 | AT3G48420 [Arabidopsis thalian | 0.407 | 0.473 | 0.343 | 2.8e-18 | |
| TAIR|locus:2140050 | 316 | AT4G39970 [Arabidopsis thalian | 0.350 | 0.411 | 0.299 | 1.3e-07 |
| TAIR|locus:2153348 AT5G45170 "AT5G45170" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 939 (335.6 bits), Expect = 2.3e-94, P = 2.3e-94
Identities = 176/287 (61%), Positives = 226/287 (78%)
Query: 59 GKCLHVNPXXXXXXXXGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDC 118
GKCL + + NP + AV+LEVD V++D + NRQAFNVAFQKLGLDC
Sbjct: 53 GKCLRLQRFSSICLSASREDVNPSEEFAVILEVDRVMIDTWS-SNRQAFNVAFQKLGLDC 111
Query: 119 ANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFL 178
ANW P+Y+DLLRK A DE++ML+L+FN+IGWP+S+PT+EK +FVK+VL+EKKNA+DEFL
Sbjct: 112 ANWPEPVYSDLLRKGAADEEKMLLLYFNQIGWPSSLPTSEKASFVKSVLREKKNAMDEFL 171
Query: 179 ASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNE 238
SK PLR GV++F+D+AY E +P+ ++TAY KSGD++A S+VE LG ER+ +K++G+
Sbjct: 172 ISKSLPLRSGVQEFIDNAYAEKVPVAIVTAYCKSGDKVALSIVEMLGQERLPNVKVIGDN 231
Query: 239 EVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPES 298
EVE+S+YGQ VLGKG+SS ++EQL E +KA SA+KQ IAEEVASMLKLSVDIDT+S E
Sbjct: 232 EVEQSMYGQLVLGKGVSSSLEEQLVKEVKKAASAEKQRIAEEVASMLKLSVDIDTTSSER 291
Query: 299 LDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345
L+KIV ALRA AE+ PV NC L+AGSQ GV+ A+ IGMPCVVMRS
Sbjct: 292 LEKIVVALRAAAEHIGLPVNNCVLVAGSQPGVSAAKMIGMPCVVMRS 338
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| TAIR|locus:2101165 AT3G48420 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 229 (85.7 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 55/160 (34%), Positives = 86/160 (53%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
A+L + DGVLVD + G+R +FN F++ L+ W +Y +LL K G ++RM +F
Sbjct: 78 ALLFDCDGVLVDTEKDGHRISFNDTFKERDLN-VTWDVDLYGELL-KIGGGKERMTA-YF 134
Query: 146 NRIGWPTSVPTNE--KKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPL 203
N++GWP P +E +K F+ + ++K + K PLRPGV VD A G+ +
Sbjct: 135 NKVGWPEKAPKDEAERKEFIAGLHKQKTELFMVLIEKKLLPLRPGVAKLVDQALTNGVKV 194
Query: 204 IVLTAYGKSGDRIARSVVE-KLGSERISKIKIVGNEEVER 242
V + S ++ ++V LG ER KIKI + V +
Sbjct: 195 AVCST---SNEKAVSAIVSCLLGPERAEKIKIFAGDVVPK 231
|
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| TAIR|locus:2140050 AT4G39970 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 125 (49.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 44/147 (29%), Positives = 68/147 (46%)
Query: 81 PPRDL-AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCA-------NWTAPIYTDLLRK 132
P R L A++ + DGV++++ +RQA+N AF + C +W+ Y
Sbjct: 59 PLRSLEALIFDCDGVILESENL-HRQAYNDAFSHFDVRCPPSSSESLDWSLEFYDKFQNL 117
Query: 133 SAGDEDRMLVLFFNRIGWPTSV-----PTNEK-KAFVKNVLQE-KKNALDEFLASKDAPL 185
G + +M +F GWPTS P N+ +A + + LQ+ K E + S
Sbjct: 118 VGGGKPKMR-WYFKENGWPTSTIFDSPPQNDDDRAKLIDTLQDWKTERYKEIIKSGSVEP 176
Query: 186 RPGVEDFVDDAYNEGIPLIVLTAYGKS 212
RPGV +D+A G L V +A KS
Sbjct: 177 RPGVIRLMDEAKAAGKKLAVCSAATKS 203
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | eugene3.00150918 | hypothetical protein (380 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | gw1.XIII.601.1 | SubName- Full=Putative uncharacterized protein; (1016 aa) | • | • | 0.508 | ||||||
 | gw1.XIX.851.1 | hypothetical protein (317 aa) | • | • | 0.427 | ||||||
 | fgenesh4_pm.C_LG_X000153 | hypothetical protein (221 aa) | • | • | 0.403 | ||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 371 | |||
| PLN02779 | 286 | PLN02779, PLN02779, haloacid dehalogenase-like hyd | 6e-22 | |
| pfam13419 | 176 | pfam13419, HAD_2, Haloacid dehalogenase-like hydro | 4e-06 | |
| COG0546 | 220 | COG0546, Gph, Predicted phosphatases [General func | 6e-05 |
| >gnl|CDD|215416 PLN02779, PLN02779, haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Score = 94.0 bits (234), Expect = 6e-22
Identities = 56/164 (34%), Positives = 84/164 (51%), Gaps = 12/164 (7%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
A+L + DGVLV+ R G+R AFN AF++ GL W +Y D L G ++RM +F
Sbjct: 42 ALLFDCDGVLVETERDGHRVAFNDAFKEFGLRPVEWDVELY-DELLNIGGGKERM-TWYF 99
Query: 146 NRIGWPTS----VPTNE--KKAFVKNVLQEKKNAL-DEFLASKDAPLRPGVEDFVDDAYN 198
N GWPTS P +E +K V + L ++K L E + S PLRPGV +D+A
Sbjct: 100 NENGWPTSTIEKAPKDEEERKELVDS-LHDRKTELFKELIESGALPLRPGVLRLMDEALA 158
Query: 199 EGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242
GI + V + + + + LG ER + + ++V +
Sbjct: 159 AGIKVAVCSTSNEKAVSKIVNTL--LGPERAQGLDVFAGDDVPK 200
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Length = 286 |
| >gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 4e-06
Identities = 27/143 (18%), Positives = 49/143 (34%), Gaps = 26/143 (18%)
Query: 87 VLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFN 146
++ ++DG L+D ++A ++LGLD + +L D L
Sbjct: 1 IIFDLDGTLIDFDPVIFEALRDLAAERLGLDISAE------ELREAGGLPFDEALADLLR 54
Query: 147 RIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVL 206
E AL E+ P V + + +G+ L++L
Sbjct: 55 EHP---------------IDPDEILEALLEYNLESRLEPFPDVVELLRRLKAKGVKLVIL 99
Query: 207 TAYGKSGDR-IARSVVEKLGSER 228
+ +G R ++EKLG
Sbjct: 100 S----NGSREAVERLLEKLGLLD 118
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Length = 176 |
| >gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 6e-05
Identities = 29/141 (20%), Positives = 58/141 (41%), Gaps = 20/141 (14%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDE-DRMLVLF 144
A+L ++DG LVD+ +AFN A +LGL P+ + +R+ G D ++
Sbjct: 6 AILFDLDGTLVDSAE-DILRAFNAALAELGLP------PLDEEEIRQLIGLGLDELIERL 58
Query: 145 FNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLI 204
+ V + ++ L + ++ L PGV++ + + G L
Sbjct: 59 LGEADEEAAAE---------LVERLREEFLTAYAELLESRLFPGVKELLAALKSAGYKLG 109
Query: 205 VLTAYGKSGDRIARSVVEKLG 225
++T + +++ LG
Sbjct: 110 IVTNKPERE---LDILLKALG 127
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Length = 220 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 371 | |||
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 99.96 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 99.96 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 99.95 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 99.95 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 99.95 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 99.95 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 99.95 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 99.95 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 99.95 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 99.95 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 99.94 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 99.94 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 99.94 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 99.94 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 99.94 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 99.94 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 99.94 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 99.94 | |
| PLN02940 | 382 | riboflavin kinase | 99.93 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 99.93 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 99.93 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 99.93 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 99.93 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 99.93 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 99.93 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 99.92 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 99.92 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 99.91 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 99.91 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 99.91 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.9 | |
| PLN02811 | 220 | hydrolase | 99.89 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 99.89 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 99.89 | |
| KOG2914 | 222 | consensus Predicted haloacid-halidohydrolase and r | 99.88 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 99.88 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 99.87 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 99.87 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 99.87 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 99.86 | |
| KOG3085 | 237 | consensus Predicted hydrolase (HAD superfamily) [G | 99.85 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 99.85 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 99.84 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.82 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 99.81 | |
| PLN02954 | 224 | phosphoserine phosphatase | 99.81 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 99.81 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 99.78 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 99.75 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.75 | |
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 99.75 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 99.73 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 99.73 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 99.69 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 99.67 | |
| PRK06769 | 173 | hypothetical protein; Validated | 99.66 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 99.64 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 99.64 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 99.62 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.59 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 99.58 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 99.57 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 99.56 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 99.56 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 99.56 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.55 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 99.54 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 99.53 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 99.53 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 99.52 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 99.51 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 99.5 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 99.5 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.49 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 99.44 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 99.43 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 99.42 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 99.35 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 99.34 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 99.33 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 99.29 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 99.23 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 99.22 | |
| PRK08238 | 479 | hypothetical protein; Validated | 99.21 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 99.21 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 99.21 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 99.2 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 99.18 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 99.16 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.14 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.12 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 99.12 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 99.08 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 99.07 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.07 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 99.05 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 99.05 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 99.04 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.94 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 98.93 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 98.82 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 98.81 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 98.8 | |
| COG4229 | 229 | Predicted enolase-phosphatase [Energy production a | 98.79 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 98.79 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 98.77 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.74 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 98.73 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 98.7 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.7 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 98.65 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.64 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.61 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.61 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 98.59 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 98.59 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.56 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.55 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 98.51 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 98.48 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 98.47 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.46 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.44 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 98.41 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.4 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.39 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 98.3 | |
| PLN02887 | 580 | hydrolase family protein | 98.26 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 98.18 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 98.16 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.16 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.16 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 98.1 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 98.1 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 98.06 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 98.02 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 98.01 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 97.96 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.95 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 97.92 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 97.87 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 97.83 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.8 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 97.79 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 97.7 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 97.68 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 97.68 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 97.63 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 97.58 | |
| KOG2630 | 254 | consensus Enolase-phosphatase E-1 [Amino acid tran | 97.57 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 97.53 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.49 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 97.47 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 97.45 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 97.35 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 97.33 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 97.24 | |
| PF05761 | 448 | 5_nucleotid: 5' nucleotidase family; InterPro: IPR | 97.24 | |
| COG5663 | 194 | Uncharacterized conserved protein [Function unknow | 97.23 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 97.08 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 97.06 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 96.98 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 96.95 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 96.92 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 96.9 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 96.83 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 96.8 | |
| COG4996 | 164 | Predicted phosphatase [General function prediction | 96.75 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 96.71 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 96.58 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 96.38 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 96.28 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.23 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 96.04 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 96.02 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 96.01 | |
| COG5610 | 635 | Predicted hydrolase (HAD superfamily) [General fun | 95.95 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 95.85 | |
| PLN02499 | 498 | glycerol-3-phosphate acyltransferase | 95.85 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 95.82 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 95.82 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 95.61 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 95.61 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 95.58 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 95.43 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 95.39 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 95.3 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 95.04 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 94.95 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 94.83 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 94.7 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 93.92 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 93.83 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 93.77 | |
| KOG2961 | 190 | consensus Predicted hydrolase (HAD superfamily) [G | 93.53 | |
| KOG2470 | 510 | consensus Similar to IMP-GMP specific 5'-nucleotid | 93.27 | |
| KOG2116 | 738 | consensus Protein involved in plasmid maintenance/ | 92.77 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 92.65 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 92.55 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 92.49 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 91.84 | |
| PLN02423 | 245 | phosphomannomutase | 91.76 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 91.04 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 90.46 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 89.47 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 88.65 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 88.5 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 87.61 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 87.33 | |
| KOG3128 | 298 | consensus Uncharacterized conserved protein [Funct | 86.74 | |
| PF06189 | 264 | 5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103 | 86.52 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 86.35 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 86.29 | |
| PLN02423 | 245 | phosphomannomutase | 86.18 | |
| KOG2134 | 422 | consensus Polynucleotide kinase 3' phosphatase [Re | 86.04 | |
| KOG4549 | 144 | consensus Magnesium-dependent phosphatase [General | 85.81 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 85.38 | |
| COG5083 | 580 | SMP2 Uncharacterized protein involved in plasmid m | 85.15 | |
| TIGR01658 | 274 | EYA-cons_domain eyes absent protein conserved doma | 84.6 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 83.92 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 83.91 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 83.5 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 83.42 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 83.28 | |
| PLN02580 | 384 | trehalose-phosphatase | 82.99 | |
| KOG0323 | 635 | consensus TFIIF-interacting CTD phosphatases, incl | 82.1 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 81.93 | |
| PF06506 | 176 | PrpR_N: Propionate catabolism activator; InterPro: | 80.85 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 80.09 |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-27 Score=230.77 Aligned_cols=224 Identities=28% Similarity=0.475 Sum_probs=160.4
Q ss_pred CCceEEEEecCCcccccc-ccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCC----CCC--
Q 017455 82 PRDLAVLLEVDGVLVDAY-RFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWP----TSV-- 154 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~-~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~----~~~-- 154 (371)
.++++|||||||||+|+. .. +..+|+++++++|++...|+.+.+..+.. .++....+... +...+++ ...
T Consensus 38 ~~~k~VIFDlDGTLvDS~~~~-~~~a~~~~l~~~G~~~~~~~~~~~~~~~~-~g~~~~~~~~~-~~~~~~~~~~~~~~~~ 114 (286)
T PLN02779 38 ALPEALLFDCDGVLVETERDG-HRVAFNDAFKEFGLRPVEWDVELYDELLN-IGGGKERMTWY-FNENGWPTSTIEKAPK 114 (286)
T ss_pred cCCcEEEEeCceeEEccccHH-HHHHHHHHHHHcCCCCCCCCHHHHHHHHc-cCCChHHHHHH-HHHcCCCccccccCCc
Confidence 457999999999999999 87 89999999999998422366666555544 33334444333 3445555 111
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchh-e
Q 017455 155 PTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI-K 233 (371)
Q Consensus 155 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~-~ 233 (371)
..++.+..++.+.+.+.+.|.+.+....++++||+.++|+.|+++|++++|+||+. ...+..+++.++...+|+. .
T Consensus 115 ~~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~~---~~~~~~~l~~~~~~~~~~~~~ 191 (286)
T PLN02779 115 DEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSN---EKAVSKIVNTLLGPERAQGLD 191 (286)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCCC---HHHHHHHHHHhccccccCceE
Confidence 12222334445555556666666533446899999999999999999999999954 6777788887754444432 1
Q ss_pred eecchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHc
Q 017455 234 IVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA 313 (371)
Q Consensus 234 i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~l 313 (371)
++++ +++. ..||+|++ |..+++++
T Consensus 192 ~v~~--------------~~~~----------------------------~~KP~p~~--------------~~~a~~~~ 215 (286)
T PLN02779 192 VFAG--------------DDVP----------------------------KKKPDPDI--------------YNLAAETL 215 (286)
T ss_pred EEec--------------cccC----------------------------CCCCCHHH--------------HHHHHHHh
Confidence 1122 2221 23888888 99999999
Q ss_pred CCCCCcEEEEeCCHhhHHHHHHcCCcEEEECCCCCCCcccccccccchHHHHhh
Q 017455 314 EKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSRCITTLPVSKTQRLADMLCRIL 367 (371)
Q Consensus 314 gv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l~~~~~~~~~l~~~l 367 (371)
|++|++||||||+.+|+++|+++||++|++.+++....++..++.+++++.+..
T Consensus 216 ~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~~~~l~ 269 (286)
T PLN02779 216 GVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDCLGDVP 269 (286)
T ss_pred CcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECChhhcc
Confidence 999999999999999999999999999999988766666666677776666543
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-27 Score=221.33 Aligned_cols=190 Identities=22% Similarity=0.305 Sum_probs=141.0
Q ss_pred CceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHHH
Q 017455 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (371)
Q Consensus 83 ~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~ 162 (371)
++++|||||||||+|++.. +..+|.++++++|+. .+.+.+....+ +...+....+....+......
T Consensus 1 ~~~avIFD~DGvLvDse~~-~~~a~~~~~~~~g~~---~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~------- 66 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEPL-HARAWLEALKEYGIE---ISDEEIRELHG---GGIARIIDLLRKLAAGEDPAD------- 66 (221)
T ss_pred CCcEEEEcCCCCcCcchHH-HHHHHHHHHHHcCCC---CCHHHHHHHHC---CChHHHHHHHHHHhcCCcccC-------
Confidence 3689999999999999998 999999999999987 45555555542 222333333333332221111
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHh
Q 017455 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (371)
Q Consensus 163 ~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~ 242 (371)
.....+........ .....++.||+.++|++|+++|+++++.|+ +....+...+..+|+.++|+.++ ++++
T Consensus 67 ~~~~~~~~~~~~~~--~~~~~~~~pGv~~~l~~L~~~~i~~avaS~---s~~~~~~~~L~~~gl~~~f~~~v-~~~d--- 137 (221)
T COG0637 67 LAELERLLYEAEAL--ELEGLKPIPGVVELLEQLKARGIPLAVASS---SPRRAAERVLARLGLLDYFDVIV-TADD--- 137 (221)
T ss_pred HHHHHHHHHHHHHh--hhcCCCCCccHHHHHHHHHhcCCcEEEecC---ChHHHHHHHHHHccChhhcchhc-cHHH---
Confidence 00111111112211 235688999999999999999999999999 44788999999999999988743 2222
Q ss_pred hhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEE
Q 017455 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (371)
Q Consensus 243 ~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~ 322 (371)
+.++ ||+|++ |+.++++||++|++||+
T Consensus 138 -----------v~~~----------------------------KP~Pd~--------------yL~Aa~~Lgv~P~~Cvv 164 (221)
T COG0637 138 -----------VARG----------------------------KPAPDI--------------YLLAAERLGVDPEECVV 164 (221)
T ss_pred -----------HhcC----------------------------CCCCHH--------------HHHHHHHcCCChHHeEE
Confidence 2222 899999 99999999999999999
Q ss_pred EeCCHhhHHHHHHcCCcEEEECCCCC
Q 017455 323 IAGSQSGVAGAQRIGMPCVVMRSRCI 348 (371)
Q Consensus 323 IgDs~~Di~aA~~aGm~~v~v~~~~~ 348 (371)
|+|+.++|+||++|||.+|++..++.
T Consensus 165 iEDs~~Gi~Aa~aAGm~vv~v~~~~~ 190 (221)
T COG0637 165 VEDSPAGIQAAKAAGMRVVGVPAGHD 190 (221)
T ss_pred EecchhHHHHHHHCCCEEEEecCCCC
Confidence 99999999999999999999987554
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-27 Score=218.59 Aligned_cols=211 Identities=16% Similarity=0.162 Sum_probs=157.3
Q ss_pred ceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHH-HHHhhcCChHHHHHHHHHHcCCCCCCCcchhHHH
Q 017455 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTD-LLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (371)
Q Consensus 84 ~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~ 162 (371)
+|+||||+||||+|+... +..+|+++++++|.+ .+.+.+.. +.+ .....+...+....|.+ ...
T Consensus 1 ~k~iiFD~DGTL~ds~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~--------~~~ 65 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGL-VYRALRQAVTAAGLS---PTPEEVQSAWMG---QSKIEAIRALLALDGAD--------EAE 65 (220)
T ss_pred CcEEEEecCCCeeccCch-HHHHHHHHHHHcCCC---CCHHHHHHhhcC---CCHHHHHHHHHhccCCC--------HHH
Confidence 479999999999999997 999999999999987 34444444 332 22334444555554532 112
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcc--ccchheeecchhH
Q 017455 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE--RISKIKIVGNEEV 240 (371)
Q Consensus 163 ~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~--~~f~~~i~~~~~~ 240 (371)
.+.+...+.+.+.+.......+++||+.++|+.|+++|++++|+||+ ....+..+++.+|+. ++|+.++.+. +.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~---~~~~~~~~l~~~~l~~~~~f~~i~~~~-~~ 141 (220)
T TIGR03351 66 AQAAFADFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGF---DRDTAERLLEKLGWTVGDDVDAVVCPS-DV 141 (220)
T ss_pred HHHHHHHHHHHHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCC---chHHHHHHHHHhhhhhhccCCEEEcCC-cC
Confidence 33455555656655553445689999999999999999999999994 478899999999998 8988754322 21
Q ss_pred HhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCC-CCc
Q 017455 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP-VRN 319 (371)
Q Consensus 241 ~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~-p~e 319 (371)
. ..||+|++ |+.+++++|+. |++
T Consensus 142 --------------~----------------------------~~KP~p~~--------------~~~a~~~~~~~~~~~ 165 (220)
T TIGR03351 142 --------------A----------------------------AGRPAPDL--------------ILRAMELTGVQDVQS 165 (220)
T ss_pred --------------C----------------------------CCCCCHHH--------------HHHHHHHcCCCChhH
Confidence 1 12788888 99999999997 799
Q ss_pred EEEEeCCHhhHHHHHHcCCcE-EEECCCCCCCcccc--cccccchHHHHhhhh
Q 017455 320 CFLIAGSQSGVAGAQRIGMPC-VVMRSRCITTLPVS--KTQRLADMLCRILKS 369 (371)
Q Consensus 320 ~I~IgDs~~Di~aA~~aGm~~-v~v~~~~~~~~~l~--~~~~~~~~l~~~l~~ 369 (371)
|+||||+.+|+++|+++||.+ |++.++......+. .++.+++++.++++.
T Consensus 166 ~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l~~~ 218 (220)
T TIGR03351 166 VAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSVADLPAL 218 (220)
T ss_pred eEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecCHHHHHHh
Confidence 999999999999999999999 89988765554443 455677777666553
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.7e-27 Score=223.10 Aligned_cols=195 Identities=16% Similarity=0.123 Sum_probs=141.0
Q ss_pred ceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhc-------CChHHHHHHHHHHcCCCCCCCc
Q 017455 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSA-------GDEDRMLVLFFNRIGWPTSVPT 156 (371)
Q Consensus 84 ~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~-------g~~~~~~~~~~~~~g~~~~~~~ 156 (371)
+++||||+||||+|+....+..+|+++++++|.+ ++.+.+...++... +........+...+|.+..
T Consensus 2 ~k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g~~---~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 75 (253)
T TIGR01422 2 IEAVIFDWAGTTVDFGSFAPTQAFVEAFAEFGVQ---ITLEEARGPMGLGKWDHIRALLKMPAVAERWRAKFGRLPT--- 75 (253)
T ss_pred ceEEEEeCCCCeecCCCccHHHHHHHHHHHcCCC---ccHHHHHHhcCccHHHHHHHHhcCHHHHHHHHHHhCCCCC---
Confidence 6899999999999986532578999999999975 55554443332100 0001112223344554322
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccc-hheee
Q 017455 157 NEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS-KIKIV 235 (371)
Q Consensus 157 ~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f-~~~i~ 235 (371)
.+.+..+...+.+.+.+.+ .....++||+.++|+.|+++|++++|+||+ ....++.+++++|+..+| +. |+
T Consensus 76 ---~~~~~~~~~~~~~~~~~~~-~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~---~~~~~~~~l~~~gl~~~f~d~-ii 147 (253)
T TIGR01422 76 ---EADIEAIYEAFEPLQLAKL-AEYSSPIPGVIEVIAYLRARGIKIGSTTGY---TREMMDVVAPEAALQGYRPDY-NV 147 (253)
T ss_pred ---HHHHHHHHHHHHHHHHHHH-HhcCccCCCHHHHHHHHHHCCCeEEEECCC---cHHHHHHHHHHHHhcCCCCce-EE
Confidence 1223344455555544444 345789999999999999999999999994 478889999999999886 55 34
Q ss_pred cchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCC
Q 017455 236 GNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK 315 (371)
Q Consensus 236 ~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv 315 (371)
+++++. ..||+|++ |..+++++|+
T Consensus 148 ~~~~~~------------------------------------------~~KP~p~~--------------~~~a~~~l~~ 171 (253)
T TIGR01422 148 TTDDVP------------------------------------------AGRPAPWM--------------ALKNAIELGV 171 (253)
T ss_pred ccccCC------------------------------------------CCCCCHHH--------------HHHHHHHcCC
Confidence 443332 22788888 9999999999
Q ss_pred C-CCcEEEEeCCHhhHHHHHHcCCcEEEECCCCC
Q 017455 316 P-VRNCFLIAGSQSGVAGAQRIGMPCVVMRSRCI 348 (371)
Q Consensus 316 ~-p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~~~ 348 (371)
. |++||||||+.+|+++|+++||.+|+|.+|+.
T Consensus 172 ~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~ 205 (253)
T TIGR01422 172 YDVAACVKVGDTVPDIEEGRNAGMWTVGLILSSN 205 (253)
T ss_pred CCchheEEECCcHHHHHHHHHCCCeEEEEecCCc
Confidence 5 99999999999999999999999999998865
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-27 Score=216.10 Aligned_cols=209 Identities=21% Similarity=0.230 Sum_probs=155.4
Q ss_pred EEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHHHHHHH
Q 017455 87 VLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNV 166 (371)
Q Consensus 87 viFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l 166 (371)
||||+||||+|+... +..+|+.+++++|.+ .++.+.+...++. ....+...++...+...+ .+.++.+
T Consensus 1 viFD~DGTL~Ds~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~------~~~~~~~ 68 (213)
T TIGR01449 1 VLFDLDGTLVDSAPD-IAAAVNMALAALGLP--PATLARVIGFIGN---GVPVLMERVLAWAGQEPD------AQRVAEL 68 (213)
T ss_pred CeecCCCccccCHHH-HHHHHHHHHHHCCCC--CCCHHHHHHHhcc---cHHHHHHHHhhccccccC------hHHHHHH
Confidence 699999999999886 889999999999986 3666655554422 223343444444443322 1223444
Q ss_pred HHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhc
Q 017455 167 LQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYG 246 (371)
Q Consensus 167 ~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~ 246 (371)
.+.+...|.+.. .+..+++||+.++|+.|+++|++++|+||+ ....+..+++++|+.++|+.+ ++++++.
T Consensus 69 ~~~~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~---~~~~~~~~l~~~~l~~~f~~~-~~~~~~~----- 138 (213)
T TIGR01449 69 RKLFDRHYEEVA-GELTSVFPGVEATLGALRAKGLRLGLVTNK---PTPLARPLLELLGLAKYFSVL-IGGDSLA----- 138 (213)
T ss_pred HHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHcCcHhhCcEE-EecCCCC-----
Confidence 555555555544 335679999999999999999999999994 478899999999999998864 3332221
Q ss_pred cccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 017455 247 QFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS 326 (371)
Q Consensus 247 ~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs 326 (371)
..||+|++ |..+++++|++|++|++|||+
T Consensus 139 -------------------------------------~~Kp~p~~--------------~~~~~~~~~~~~~~~~~igDs 167 (213)
T TIGR01449 139 -------------------------------------QRKPHPDP--------------LLLAAERLGVAPQQMVYVGDS 167 (213)
T ss_pred -------------------------------------CCCCChHH--------------HHHHHHHcCCChhHeEEeCCC
Confidence 22788888 999999999999999999999
Q ss_pred HhhHHHHHHcCCcEEEECCCCCCCccc--ccccccchHHHHhhh
Q 017455 327 QSGVAGAQRIGMPCVVMRSRCITTLPV--SKTQRLADMLCRILK 368 (371)
Q Consensus 327 ~~Di~aA~~aGm~~v~v~~~~~~~~~l--~~~~~~~~~l~~~l~ 368 (371)
.+|+.+|+++||++|++.+++.....+ ..++.+++++.+++.
T Consensus 168 ~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~~ 211 (213)
T TIGR01449 168 RVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNELPP 211 (213)
T ss_pred HHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHHHHHh
Confidence 999999999999999998876544333 346677777777665
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.5e-27 Score=218.98 Aligned_cols=211 Identities=18% Similarity=0.208 Sum_probs=154.7
Q ss_pred ceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHHHH
Q 017455 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (371)
Q Consensus 84 ~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 163 (371)
+|+||||+||||+|+... +..+|+.+++++|.+ .++.+.+....+. ....+..... + . .+.. ..
T Consensus 12 ~k~viFD~DGTL~Ds~~~-~~~a~~~~~~~~g~~--~~~~~~~~~~~g~---~~~~~~~~~~---~-~--~~~~----~~ 75 (229)
T PRK13226 12 PRAVLFDLDGTLLDSAPD-MLATVNAMLAARGRA--PITLAQLRPVVSK---GARAMLAVAF---P-E--LDAA----AR 75 (229)
T ss_pred CCEEEEcCcCccccCHHH-HHHHHHHHHHHCCCC--CCCHHHHHHHhhh---HHHHHHHHHh---c-c--CChH----HH
Confidence 589999999999999987 999999999999987 3676665554432 1222221111 1 1 1111 12
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhh
Q 017455 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243 (371)
Q Consensus 164 ~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~ 243 (371)
+++.+.+.+.|.+.+. ...+++||+.++|+.|+++|++++|+||+. ...+..+++++|+.++|+.+ ++++++
T Consensus 76 ~~~~~~~~~~~~~~~~-~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~---~~~~~~~l~~~~l~~~f~~i-~~~~~~--- 147 (229)
T PRK13226 76 DALIPEFLQRYEALIG-TQSQLFDGVEGMLQRLECAGCVWGIVTNKP---EYLARLILPQLGWEQRCAVL-IGGDTL--- 147 (229)
T ss_pred HHHHHHHHHHHHHhhh-hcCeeCCCHHHHHHHHHHCCCeEEEECCCC---HHHHHHHHHHcCchhcccEE-EecCcC---
Confidence 3444555555555442 346799999999999999999999999953 67788889999999988764 333221
Q ss_pred hhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEE
Q 017455 244 LYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLI 323 (371)
Q Consensus 244 ~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~I 323 (371)
. ..||+|++ |+.+++++|++|++|+||
T Consensus 148 -----------~----------------------------~~KP~p~~--------------~~~~~~~l~~~p~~~l~I 174 (229)
T PRK13226 148 -----------A----------------------------ERKPHPLP--------------LLVAAERIGVAPTDCVYV 174 (229)
T ss_pred -----------C----------------------------CCCCCHHH--------------HHHHHHHhCCChhhEEEe
Confidence 1 23788888 999999999999999999
Q ss_pred eCCHhhHHHHHHcCCcEEEECCCCCCCc-cc--ccccccchHHHHhhhhcC
Q 017455 324 AGSQSGVAGAQRIGMPCVVMRSRCITTL-PV--SKTQRLADMLCRILKSIT 371 (371)
Q Consensus 324 gDs~~Di~aA~~aGm~~v~v~~~~~~~~-~l--~~~~~~~~~l~~~l~~i~ 371 (371)
||+.+|+++|+++||++|++.+++.... .+ ..++.+++++-++++-+|
T Consensus 175 GDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~~~ 225 (229)
T PRK13226 175 GDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNPAT 225 (229)
T ss_pred CCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHHhc
Confidence 9999999999999999999988865322 22 346778887777766543
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.3e-27 Score=215.03 Aligned_cols=207 Identities=12% Similarity=0.118 Sum_probs=150.8
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHH
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (371)
|++++||||+||||+|+... +..+|..++++++.. ..+.+.+.... |.... ..+..++ ..
T Consensus 1 m~~~~viFD~DGTL~ds~~~-~~~a~~~~~~~~~~~--~~~~~~~~~~~----G~~~~---~~~~~~~------~~---- 60 (214)
T PRK13288 1 MKINTVLFDLDGTLINTNEL-IISSFLHTLKTYYPN--QYKREDVLPFI----GPSLH---DTFSKID------ES---- 60 (214)
T ss_pred CCccEEEEeCCCcCccCHHH-HHHHHHHHHHHhCCC--CCCHHHHHHHh----CcCHH---HHHHhcC------HH----
Confidence 46899999999999999987 899999999998865 24555444443 22211 1222221 11
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHH
Q 017455 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (371)
Q Consensus 162 ~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~ 241 (371)
..+.+...+...+.+.. ....+++||+.++|+.|+++|++++|+||+ ....+...++.+|+.++|+.++ +.+++
T Consensus 61 ~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~---~~~~~~~~l~~~gl~~~f~~i~-~~~~~- 134 (214)
T PRK13288 61 KVEEMITTYREFNHEHH-DELVTEYETVYETLKTLKKQGYKLGIVTTK---MRDTVEMGLKLTGLDEFFDVVI-TLDDV- 134 (214)
T ss_pred HHHHHHHHHHHHHHHhh-hhhcccCcCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHcCChhceeEEE-ecCcC-
Confidence 12233334443333322 234679999999999999999999999994 4788999999999999998743 33222
Q ss_pred hhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 017455 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (371)
Q Consensus 242 ~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I 321 (371)
. ..||+|++ |+.+++++|++|++|+
T Consensus 135 -------------~----------------------------~~Kp~p~~--------------~~~~~~~~~~~~~~~~ 159 (214)
T PRK13288 135 -------------E----------------------------HAKPDPEP--------------VLKALELLGAKPEEAL 159 (214)
T ss_pred -------------C----------------------------CCCCCcHH--------------HHHHHHHcCCCHHHEE
Confidence 1 22788888 9999999999999999
Q ss_pred EEeCCHhhHHHHHHcCCcEEEECCCCCCCccc--ccccccchHHHHhhhh
Q 017455 322 LIAGSQSGVAGAQRIGMPCVVMRSRCITTLPV--SKTQRLADMLCRILKS 369 (371)
Q Consensus 322 ~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l--~~~~~~~~~l~~~l~~ 369 (371)
||||+.+|+++|+++||++|++.++.....++ ..++.+++++.++++-
T Consensus 160 ~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~ 209 (214)
T PRK13288 160 MVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLLAI 209 (214)
T ss_pred EECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHHHH
Confidence 99999999999999999999998886544333 2456677777666543
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=7e-27 Score=220.33 Aligned_cols=210 Identities=19% Similarity=0.211 Sum_probs=148.5
Q ss_pred CCCCCceEEEEecCCccccccccCcHHHHHHHHHHcCCC-CCCCChHHHHHHHHhhcCC-hHHHHHHHHHHcCCCCCCCc
Q 017455 79 QNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLD-CANWTAPIYTDLLRKSAGD-EDRMLVLFFNRIGWPTSVPT 156 (371)
Q Consensus 79 ~~~~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~-~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~g~~~~~~~ 156 (371)
+...++++||||+||||+|+... +..+|+++++++|.. ...++.+.+... ..|. ...+...++ .. ..
T Consensus 17 ~~~~~~k~viFDlDGTLiDs~~~-~~~a~~~~~~~~g~~~g~~~~~~~~~~~---~~G~~~~~~~~~~~---~~--~~-- 85 (248)
T PLN02770 17 SGLAPLEAVLFDVDGTLCDSDPL-HYYAFREMLQEINFNGGVPITEEFFVEN---IAGKHNEDIALGLF---PD--DL-- 85 (248)
T ss_pred cccCccCEEEEcCCCccCcCHHH-HHHHHHHHHHHhccccCCCCCHHHHHHH---cCCCCHHHHHHHHc---Cc--ch--
Confidence 44556899999999999999987 999999999999753 112444433222 1232 222222221 11 10
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeec
Q 017455 157 NEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVG 236 (371)
Q Consensus 157 ~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~ 236 (371)
+. ...+...+...|.+.. .....++||+.++|+.|+++|++++|+||+ ....+...++++|+.++|+.++.+
T Consensus 86 ---~~-~~~~~~~~~~~y~~~~-~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~---~~~~~~~~l~~~gl~~~Fd~iv~~ 157 (248)
T PLN02770 86 ---ER-GLKFTDDKEALFRKLA-SEQLKPLNGLYKLKKWIEDRGLKRAAVTNA---PRENAELMISLLGLSDFFQAVIIG 157 (248)
T ss_pred ---hh-HHHHHHHHHHHHHHHH-HhcCCcCccHHHHHHHHHHcCCeEEEEeCC---CHHHHHHHHHHcCChhhCcEEEec
Confidence 00 1123334445555544 335779999999999999999999999995 478899999999999999875333
Q ss_pred chhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCC
Q 017455 237 NEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP 316 (371)
Q Consensus 237 ~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~ 316 (371)
. ++ . ..||+|++ |+.+++++|++
T Consensus 158 ~-~~--------------~----------------------------~~KP~p~~--------------~~~a~~~~~~~ 180 (248)
T PLN02770 158 S-EC--------------E----------------------------HAKPHPDP--------------YLKALEVLKVS 180 (248)
T ss_pred C-cC--------------C----------------------------CCCCChHH--------------HHHHHHHhCCC
Confidence 2 22 1 12788888 99999999999
Q ss_pred CCcEEEEeCCHhhHHHHHHcCCcEEEECCCCCCCccc--ccccccchHHHH
Q 017455 317 VRNCFLIAGSQSGVAGAQRIGMPCVVMRSRCITTLPV--SKTQRLADMLCR 365 (371)
Q Consensus 317 p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l--~~~~~~~~~l~~ 365 (371)
|++|+||||+.+|+++|+++||++|++.++... ..+ ..++.+++++.+
T Consensus 181 ~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~-~~l~~~~a~~vi~~~~e 230 (248)
T PLN02770 181 KDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPE-SLLMEAKPTFLIKDYED 230 (248)
T ss_pred hhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCH-HHHhhcCCCEEeccchh
Confidence 999999999999999999999999999887532 222 245556555544
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-26 Score=219.98 Aligned_cols=209 Identities=20% Similarity=0.259 Sum_probs=148.6
Q ss_pred CCCceEEEEecCCcccccc-ccCcHHHHHHHHHHcCCCCCCCChH-HHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcch
Q 017455 81 PPRDLAVLLEVDGVLVDAY-RFGNRQAFNVAFQKLGLDCANWTAP-IYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNE 158 (371)
Q Consensus 81 ~~~~kaviFD~DGTL~d~~-~~~~~~a~~~~~~~~g~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~ 158 (371)
...+|+|||||||||+|+. .. +..+|+++++++|++ ++.+ ....+.+ .....+...+ +++...
T Consensus 21 ~~~~k~vIFDlDGTLvDS~~~~-~~~a~~~~~~~~G~~---~~~~e~~~~~~G---~~~~~~~~~l---~~~~~~----- 85 (260)
T PLN03243 21 GCGWLGVVLEWEGVIVEDDSEL-ERKAWRALAEEEGKR---PPPAFLLKRAEG---MKNEQAISEV---LCWSRD----- 85 (260)
T ss_pred cCCceEEEEeCCCceeCCchHH-HHHHHHHHHHHcCCC---CCHHHHHHHhcC---CCHHHHHHHH---hccCCC-----
Confidence 4568999999999999996 44 778999999999987 3333 2223322 1222222222 222211
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecch
Q 017455 159 KKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNE 238 (371)
Q Consensus 159 ~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~ 238 (371)
...+..+...+...+. .......+++||+.++|+.|+++|++++|+||+. ...+..+++++|+.++|+.++.+ +
T Consensus 86 -~~~~~~l~~~~~~~~~-~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~---~~~~~~~l~~~gl~~~Fd~ii~~-~ 159 (260)
T PLN03243 86 -FLQMKRLAIRKEDLYE-YMQGGLYRLRPGSREFVQALKKHEIPIAVASTRP---RRYLERAIEAVGMEGFFSVVLAA-E 159 (260)
T ss_pred -HHHHHHHHHHHHHHHH-HHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcC---HHHHHHHHHHcCCHhhCcEEEec-c
Confidence 1123344444444443 2223457799999999999999999999999954 78899999999999999875433 2
Q ss_pred hHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCC
Q 017455 239 EVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVR 318 (371)
Q Consensus 239 ~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~ 318 (371)
++ . ..||+|++ |+.+++++|++|+
T Consensus 160 d~--------------~----------------------------~~KP~Pe~--------------~~~a~~~l~~~p~ 183 (260)
T PLN03243 160 DV--------------Y----------------------------RGKPDPEM--------------FMYAAERLGFIPE 183 (260)
T ss_pred cC--------------C----------------------------CCCCCHHH--------------HHHHHHHhCCChH
Confidence 22 1 22888888 9999999999999
Q ss_pred cEEEEeCCHhhHHHHHHcCCcEEEECCCCCCCcccccccccchHHHHhh
Q 017455 319 NCFLIAGSQSGVAGAQRIGMPCVVMRSRCITTLPVSKTQRLADMLCRIL 367 (371)
Q Consensus 319 e~I~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l~~~~~~~~~l~~~l 367 (371)
+|+||||+..|+++|+++||++|++. +......+..++.+++++.++.
T Consensus 184 ~~l~IgDs~~Di~aA~~aG~~~i~v~-g~~~~~~l~~ad~vi~~~~el~ 231 (260)
T PLN03243 184 RCIVFGNSNSSVEAAHDGCMKCVAVA-GKHPVYELSAGDLVVRRLDDLS 231 (260)
T ss_pred HeEEEcCCHHHHHHHHHcCCEEEEEe-cCCchhhhccCCEEeCCHHHHH
Confidence 99999999999999999999999997 4333344555666666665543
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-26 Score=219.83 Aligned_cols=194 Identities=19% Similarity=0.133 Sum_probs=138.8
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHH----------HHHHHHHHcCCC
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDR----------MLVLFFNRIGWP 151 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~----------~~~~~~~~~g~~ 151 (371)
+++|+||||+||||+|+....+..+|+++++++|.+ ++.+.+...++ ..... ....+...+|.+
T Consensus 2 ~~~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g~~---~~~~~~~~~~G---~~~~~~~~~~~~~~~~~~~~~~~~g~~ 75 (267)
T PRK13478 2 MKIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGVE---ITLEEARGPMG---LGKWDHIRALLKMPRVAARWQAVFGRL 75 (267)
T ss_pred CceEEEEEcCCCCeecCCCccHHHHHHHHHHHcCCC---CCHHHHHHhcC---CCHHHHHHHHHhcHHHHHHHHHHhCCC
Confidence 458999999999999986532468999999999986 44444333321 11111 111223344543
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccc-
Q 017455 152 TSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS- 230 (371)
Q Consensus 152 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f- 230 (371)
.+ .+.+..+...+.+.+.+.+ .....++||+.++|+.|+++|++++|+||+ ....+..+++.+++..+|
T Consensus 76 ~~------~~~~~~~~~~~~~~~~~~~-~~~~~~~pg~~elL~~L~~~g~~l~I~T~~---~~~~~~~~l~~~~l~~~~~ 145 (267)
T PRK13478 76 PT------EADVDALYAAFEPLQIAKL-ADYATPIPGVLEVIAALRARGIKIGSTTGY---TREMMDVVVPLAAAQGYRP 145 (267)
T ss_pred CC------HHHHHHHHHHHHHHHHHHH-hhcCCCCCCHHHHHHHHHHCCCEEEEEcCC---cHHHHHHHHHHHhhcCCCc
Confidence 22 1223344444555554444 335679999999999999999999999994 477888889999988775
Q ss_pred hheeecchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHH
Q 017455 231 KIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGA 310 (371)
Q Consensus 231 ~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~ 310 (371)
+. |++++++. ..||+|++ |..++
T Consensus 146 d~-i~~~~~~~------------------------------------------~~KP~p~~--------------~~~a~ 168 (267)
T PRK13478 146 DH-VVTTDDVP------------------------------------------AGRPYPWM--------------ALKNA 168 (267)
T ss_pred eE-EEcCCcCC------------------------------------------CCCCChHH--------------HHHHH
Confidence 54 33333321 12788888 99999
Q ss_pred HHcCCC-CCcEEEEeCCHhhHHHHHHcCCcEEEECCCCC
Q 017455 311 EYAEKP-VRNCFLIAGSQSGVAGAQRIGMPCVVMRSRCI 348 (371)
Q Consensus 311 ~~lgv~-p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~~~ 348 (371)
+++|+. |++||||||+.+|+++|+++||++|+|.+++.
T Consensus 169 ~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~ 207 (267)
T PRK13478 169 IELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGN 207 (267)
T ss_pred HHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcc
Confidence 999996 69999999999999999999999999998865
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.5e-26 Score=211.17 Aligned_cols=214 Identities=21% Similarity=0.237 Sum_probs=155.9
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHH
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (371)
|.+++|+||+||||+|+... +..+++.+++.+|.+. .+.+....+.+. ....+ +....+..... ...+
T Consensus 2 ~~~~~iiFDlDGTL~Ds~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~ig~---~~~~~---~~~~~~~~~~~---~~~~ 69 (220)
T COG0546 2 MMIKAILFDLDGTLVDSAED-ILRAFNAALAELGLPP--LDEEEIRQLIGL---GLDEL---IERLLGEADEE---AAAE 69 (220)
T ss_pred CCCCEEEEeCCCccccChHH-HHHHHHHHHHHcCCCC--CCHHHHHHHhcC---CHHHH---HHHHhccccch---hHHH
Confidence 56899999999999999996 9999999999999983 555555555432 22222 22222222110 0012
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHH
Q 017455 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (371)
Q Consensus 162 ~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~ 241 (371)
.++.+...+.+.+.+.. ...++||+.++|..|+++|++++|+||. +...+..+++.+|+.++|+.++. .+...
T Consensus 70 ~~~~~~~~~~~~~~~~~---~~~~~~gv~e~L~~L~~~g~~l~i~T~k---~~~~~~~~l~~~gl~~~F~~i~g-~~~~~ 142 (220)
T COG0546 70 LVERLREEFLTAYAELL---ESRLFPGVKELLAALKSAGYKLGIVTNK---PERELDILLKALGLADYFDVIVG-GDDVP 142 (220)
T ss_pred HHHHHHHHHHHHHHhhc---cCccCCCHHHHHHHHHhCCCeEEEEeCC---cHHHHHHHHHHhCCccccceEEc-CCCCC
Confidence 23333333333333322 2579999999999999999999999994 48899999999999999988532 22211
Q ss_pred hhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 017455 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (371)
Q Consensus 242 ~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I 321 (371)
..||+|.. +..+++.+|++|+++|
T Consensus 143 ------------------------------------------~~KP~P~~--------------l~~~~~~~~~~~~~~l 166 (220)
T COG0546 143 ------------------------------------------PPKPDPEP--------------LLLLLEKLGLDPEEAL 166 (220)
T ss_pred ------------------------------------------CCCcCHHH--------------HHHHHHHhCCChhheE
Confidence 12777777 9999999999999999
Q ss_pred EEeCCHhhHHHHHHcCCcEEEECCCCCCCcc--cccccccchHHHHhhhhc
Q 017455 322 LIAGSQSGVAGAQRIGMPCVVMRSRCITTLP--VSKTQRLADMLCRILKSI 370 (371)
Q Consensus 322 ~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~--l~~~~~~~~~l~~~l~~i 370 (371)
||||+.+|+++|++||+++|+|.+|+..... ...++.+++++.+++..|
T Consensus 167 ~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~l 217 (220)
T COG0546 167 MVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLALL 217 (220)
T ss_pred EECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHHH
Confidence 9999999999999999999999999853333 345677888888877654
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.1e-26 Score=210.27 Aligned_cols=210 Identities=17% Similarity=0.214 Sum_probs=149.3
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHH
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (371)
+++++|+||+||||+|+... +..+|.++++++|.+. ...+.....++ .....+...+....++... +..
T Consensus 5 ~~~k~iiFD~DGTL~d~~~~-~~~a~~~~~~~~g~~~--~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~----~~~- 73 (222)
T PRK10826 5 RQILAAIFDMDGLLIDSEPL-WDRAELDVMASLGVDI--SRREELPDTLG---LRIDQVVDLWYARQPWNGP----SRQ- 73 (222)
T ss_pred ccCcEEEEcCCCCCCcCHHH-HHHHHHHHHHHCCCCC--CHHHHHHHhhC---CCHHHHHHHHHHhcCCCCC----CHH-
Confidence 35899999999999999987 8999999999999862 22233333321 2223333334444444321 111
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHH
Q 017455 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (371)
Q Consensus 162 ~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~ 241 (371)
.......+.+.+.+ ....+++||+.++|+.|+++|++++|+||+ ....+..+++++|+.++|+.++.+ +++
T Consensus 74 ---~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~---~~~~~~~~l~~~~l~~~f~~~~~~-~~~- 144 (222)
T PRK10826 74 ---EVVQRIIARVISLI-EETRPLLPGVREALALCKAQGLKIGLASAS---PLHMLEAVLTMFDLRDYFDALASA-EKL- 144 (222)
T ss_pred ---HHHHHHHHHHHHHH-hcCCCCCCCHHHHHHHHHHCCCeEEEEeCC---cHHHHHHHHHhCcchhcccEEEEc-ccC-
Confidence 22233333333333 234679999999999999999999999994 478888999999999999875432 222
Q ss_pred hhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 017455 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (371)
Q Consensus 242 ~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I 321 (371)
. ..||+|++ |+.+++++|++|++|+
T Consensus 145 -------------~----------------------------~~Kp~~~~--------------~~~~~~~~~~~~~~~~ 169 (222)
T PRK10826 145 -------------P----------------------------YSKPHPEV--------------YLNCAAKLGVDPLTCV 169 (222)
T ss_pred -------------C----------------------------CCCCCHHH--------------HHHHHHHcCCCHHHeE
Confidence 1 23788888 9999999999999999
Q ss_pred EEeCCHhhHHHHHHcCCcEEEECCCCCCCc-ccccccccchHHHHh
Q 017455 322 LIAGSQSGVAGAQRIGMPCVVMRSRCITTL-PVSKTQRLADMLCRI 366 (371)
Q Consensus 322 ~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~-~l~~~~~~~~~l~~~ 366 (371)
+|||+.+|+++|+++||++|++.++....+ ....++.++.++.++
T Consensus 170 ~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl 215 (222)
T PRK10826 170 ALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTEL 215 (222)
T ss_pred EEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccCHHHH
Confidence 999999999999999999999988765432 223445555555554
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.2e-26 Score=204.62 Aligned_cols=184 Identities=23% Similarity=0.302 Sum_probs=137.9
Q ss_pred EEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHHHHHH
Q 017455 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKN 165 (371)
Q Consensus 86 aviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 165 (371)
+||||+||||+|+... +..+|+++++++|++ ++.+....+.+ .........++.+.|...+ . +.+..
T Consensus 1 ~iiFD~DGTL~ds~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~--~----~~~~~ 67 (185)
T TIGR01990 1 AVIFDLDGVITDTAEY-HYLAWKALADELGIP---FDEEFNESLKG---VSREDSLERILDLGGKKYS--E----EEKEE 67 (185)
T ss_pred CeEEcCCCccccChHH-HHHHHHHHHHHcCCC---CCHHHHHHhcC---CChHHHHHHHHHhcCCCCC--H----HHHHH
Confidence 5899999999999997 999999999999986 55554444332 2234455566677676433 2 12233
Q ss_pred HHHHHHHHHHHHHhc-CCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhh
Q 017455 166 VLQEKKNALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSL 244 (371)
Q Consensus 166 l~~~~~~~~~~~l~~-~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~ 244 (371)
+.+.+.+.|.+.+.. ....++||+.++|+.|+++|++++|+||+. .....++++|+.++|+.++. ++++.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~-----~~~~~l~~~~l~~~f~~~~~-~~~~~--- 138 (185)
T TIGR01990 68 LAERKNDYYVELLKELTPADVLPGIKNLLDDLKKNNIKIALASASK-----NAPTVLEKLGLIDYFDAIVD-PAEIK--- 138 (185)
T ss_pred HHHHHHHHHHHHHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCc-----cHHHHHHhcCcHhhCcEEEe-hhhcC---
Confidence 444444445444321 235789999999999999999999999942 24678999999999987543 22221
Q ss_pred hccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEe
Q 017455 245 YGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIA 324 (371)
Q Consensus 245 f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~Ig 324 (371)
..||+|++ |+.+++++|++|++|||||
T Consensus 139 ---------------------------------------~~kp~p~~--------------~~~~~~~~~~~~~~~v~vg 165 (185)
T TIGR01990 139 ---------------------------------------KGKPDPEI--------------FLAAAEGLGVSPSECIGIE 165 (185)
T ss_pred ---------------------------------------CCCCChHH--------------HHHHHHHcCCCHHHeEEEe
Confidence 23888888 9999999999999999999
Q ss_pred CCHhhHHHHHHcCCcEEEEC
Q 017455 325 GSQSGVAGAQRIGMPCVVMR 344 (371)
Q Consensus 325 Ds~~Di~aA~~aGm~~v~v~ 344 (371)
|+.+|+++|+++||++|+|+
T Consensus 166 D~~~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 166 DAQAGIEAIKAAGMFAVGVG 185 (185)
T ss_pred cCHHHHHHHHHcCCEEEecC
Confidence 99999999999999999874
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.4e-26 Score=209.69 Aligned_cols=186 Identities=15% Similarity=0.234 Sum_probs=138.7
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCCh-HHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhH
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTA-PIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK 160 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~ 160 (371)
+++++|+||+||||+|+... +..+|.+++.++|.+ .+. +.+..+.+ -....++..+..+++.+..
T Consensus 2 ~~~~~viFD~DGTL~d~~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~------- 67 (221)
T PRK10563 2 SQIEAVFFDCDGTLVDSEVI-CSRAYVTMFAEFGIT---LSLEEVFKRFKG---VKLYEIIDIISKEHGVTLA------- 67 (221)
T ss_pred CCCCEEEECCCCCCCCChHH-HHHHHHHHHHHcCCC---CCHHHHHHHhcC---CCHHHHHHHHHHHhCCCCC-------
Confidence 35899999999999999886 889999999999986 333 33333221 1234455666677776533
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhH
Q 017455 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 240 (371)
Q Consensus 161 ~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~ 240 (371)
.+.+...+.+.+.... ....+++||+.++|+.| +++++|+||+ ....+...++++|+.++|+..+++++++
T Consensus 68 --~~~~~~~~~~~~~~~~-~~~~~~~~gv~~~L~~L---~~~~~ivTn~---~~~~~~~~l~~~~l~~~F~~~v~~~~~~ 138 (221)
T PRK10563 68 --KAELEPVYRAEVARLF-DSELEPIAGANALLESI---TVPMCVVSNG---PVSKMQHSLGKTGMLHYFPDKLFSGYDI 138 (221)
T ss_pred --HHHHHHHHHHHHHHHH-HccCCcCCCHHHHHHHc---CCCEEEEeCC---cHHHHHHHHHhcChHHhCcceEeeHHhc
Confidence 1123333333333322 23577999999999998 4999999995 4678889999999999996445554333
Q ss_pred HhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcE
Q 017455 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (371)
Q Consensus 241 ~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~ 320 (371)
. ..||+|++ |+.+++++|++|++|
T Consensus 139 ~------------------------------------------~~KP~p~~--------------~~~a~~~~~~~p~~~ 162 (221)
T PRK10563 139 Q------------------------------------------RWKPDPAL--------------MFHAAEAMNVNVENC 162 (221)
T ss_pred C------------------------------------------CCCCChHH--------------HHHHHHHcCCCHHHe
Confidence 2 23888888 999999999999999
Q ss_pred EEEeCCHhhHHHHHHcCCcEEEECCC
Q 017455 321 FLIAGSQSGVAGAQRIGMPCVVMRSR 346 (371)
Q Consensus 321 I~IgDs~~Di~aA~~aGm~~v~v~~~ 346 (371)
|||||+..||++|+++||++|++..+
T Consensus 163 l~igDs~~di~aA~~aG~~~i~~~~~ 188 (221)
T PRK10563 163 ILVDDSSAGAQSGIAAGMEVFYFCAD 188 (221)
T ss_pred EEEeCcHhhHHHHHHCCCEEEEECCC
Confidence 99999999999999999999998643
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.94 E-value=5e-26 Score=225.28 Aligned_cols=208 Identities=17% Similarity=0.223 Sum_probs=151.7
Q ss_pred CceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHHH
Q 017455 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (371)
Q Consensus 83 ~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~ 162 (371)
..++|||||||||+|+...-+..+|.++++++|.+. .+.+.+..+.+ .....++..++. +.. . ...
T Consensus 130 ~~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~--~~~e~~~~~~G---~~~~~~l~~ll~---~~~--~----~~~ 195 (381)
T PLN02575 130 GWLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSP--PPAFILRRVEG---MKNEQAISEVLC---WSR--D----PAE 195 (381)
T ss_pred CCCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCC--CHHHHHHHhcC---CCHHHHHHHHhh---ccC--C----HHH
Confidence 679999999999999886326689999999999873 33333333332 123333333322 211 1 122
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHh
Q 017455 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (371)
Q Consensus 163 ~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~ 242 (371)
++.+.+.+.+.|.+.. .....++||+.++|+.|+++|++++|+||+ ....+..+++++|+.++|+.++ +.+++
T Consensus 196 ~e~l~~~~~~~y~~~~-~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~---~~~~~~~~L~~lgL~~yFd~Iv-~sddv-- 268 (381)
T PLN02575 196 LRRMATRKEEIYQALQ-GGIYRLRTGSQEFVNVLMNYKIPMALVSTR---PRKTLENAIGSIGIRGFFSVIV-AAEDV-- 268 (381)
T ss_pred HHHHHHHHHHHHHHHh-ccCCCcCcCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHcCCHHHceEEE-ecCcC--
Confidence 3455555666665555 345679999999999999999999999994 4889999999999999998753 33222
Q ss_pred hhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEE
Q 017455 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (371)
Q Consensus 243 ~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~ 322 (371)
. ..||+|++ |+.+++++|++|++|||
T Consensus 269 ------------~----------------------------~~KP~Pei--------------fl~A~~~lgl~Peecl~ 294 (381)
T PLN02575 269 ------------Y----------------------------RGKPDPEM--------------FIYAAQLLNFIPERCIV 294 (381)
T ss_pred ------------C----------------------------CCCCCHHH--------------HHHHHHHcCCCcccEEE
Confidence 1 12788888 99999999999999999
Q ss_pred EeCCHhhHHHHHHcCCcEEEECCCCCCCcccccccccchHHHHh
Q 017455 323 IAGSQSGVAGAQRIGMPCVVMRSRCITTLPVSKTQRLADMLCRI 366 (371)
Q Consensus 323 IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l~~~~~~~~~l~~~ 366 (371)
|||+..||++|+++||++|++.++... ..+..++.+++++.++
T Consensus 295 IGDS~~DIeAAk~AGm~~IgV~~~~~~-~~l~~Ad~iI~s~~EL 337 (381)
T PLN02575 295 FGNSNQTVEAAHDARMKCVAVASKHPI-YELGAADLVVRRLDEL 337 (381)
T ss_pred EcCCHHHHHHHHHcCCEEEEECCCCCh-hHhcCCCEEECCHHHH
Confidence 999999999999999999999876433 3344566666666654
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-25 Score=208.02 Aligned_cols=202 Identities=16% Similarity=0.218 Sum_probs=137.8
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCh-HHHHHHHHHHcCCCCCCCcchhH
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDE-DRMLVLFFNRIGWPTSVPTNEKK 160 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~g~~~~~~~~~~~ 160 (371)
|++|+||||+||||+|+... +..+|+++++++|++. +.+... ..|.. ......+.. . .+.+
T Consensus 1 M~~k~viFDlDGTL~Ds~~~-~~~a~~~~~~~~g~~~-----~~~~~~---~~g~~~~~~~~~~~~----~--~~~~--- 62 (218)
T PRK11587 1 MRCKGFLFDLDGTLVDSLPA-VERAWSNWADRHGIAP-----DEVLNF---IHGKQAITSLRHFMA----G--ASEA--- 62 (218)
T ss_pred CCCCEEEEcCCCCcCcCHHH-HHHHHHHHHHHcCCCH-----HHHHHH---HcCCCHHHHHHHHhc----c--CCcH---
Confidence 56899999999999999987 8999999999999862 222222 22322 222222211 1 1111
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhH
Q 017455 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 240 (371)
Q Consensus 161 ~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~ 240 (371)
...+.. ... ..+.... .....++||+.++|+.|+++|++++|+||+. .......++.+++. +|+. +++.+++
T Consensus 63 ~~~~~~-~~~-~~~~~~~-~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~---~~~~~~~l~~~~l~-~~~~-i~~~~~~ 134 (218)
T PRK11587 63 EIQAEF-TRL-EQIEATD-TEGITALPGAIALLNHLNKLGIPWAIVTSGS---VPVASARHKAAGLP-APEV-FVTAERV 134 (218)
T ss_pred HHHHHH-HHH-HHHHHhh-hcCceeCcCHHHHHHHHHHcCCcEEEEcCCC---chHHHHHHHhcCCC-CccE-EEEHHHh
Confidence 111111 111 1122222 2457799999999999999999999999954 45667778888884 4543 3333332
Q ss_pred HhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcE
Q 017455 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (371)
Q Consensus 241 ~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~ 320 (371)
. ..||+|++ |..+++++|++|++|
T Consensus 135 ~------------------------------------------~~KP~p~~--------------~~~~~~~~g~~p~~~ 158 (218)
T PRK11587 135 K------------------------------------------RGKPEPDA--------------YLLGAQLLGLAPQEC 158 (218)
T ss_pred c------------------------------------------CCCCCcHH--------------HHHHHHHcCCCcccE
Confidence 1 23888888 999999999999999
Q ss_pred EEEeCCHhhHHHHHHcCCcEEEECCCCCCCcccccccccchHHHHh
Q 017455 321 FLIAGSQSGVAGAQRIGMPCVVMRSRCITTLPVSKTQRLADMLCRI 366 (371)
Q Consensus 321 I~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l~~~~~~~~~l~~~ 366 (371)
|||||+..|+++|+++||++|++.++... .....++.+++++.++
T Consensus 159 l~igDs~~di~aA~~aG~~~i~v~~~~~~-~~~~~~~~~~~~~~el 203 (218)
T PRK11587 159 VVVEDAPAGVLSGLAAGCHVIAVNAPADT-PRLDEVDLVLHSLEQL 203 (218)
T ss_pred EEEecchhhhHHHHHCCCEEEEECCCCch-hhhccCCEEecchhhe
Confidence 99999999999999999999999876532 2334455666665543
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.2e-25 Score=204.29 Aligned_cols=216 Identities=19% Similarity=0.214 Sum_probs=156.5
Q ss_pred CCCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhH
Q 017455 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK 160 (371)
Q Consensus 81 ~~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~ 160 (371)
.+++++|+||+||||+|+... +..+|..+++++|.+ .++.+.+..+.+. ....+....+...+.. .+ .
T Consensus 3 ~~~~~~iiFD~DGTL~d~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~--~~----~ 70 (226)
T PRK13222 3 FMDIRAVAFDLDGTLVDSAPD-LAAAVNAALAALGLP--PAGEERVRTWVGN---GADVLVERALTWAGRE--PD----E 70 (226)
T ss_pred CCcCcEEEEcCCcccccCHHH-HHHHHHHHHHHCCCC--CCCHHHHHHHhCc---cHHHHHHHHHhhccCC--cc----H
Confidence 356899999999999999876 889999999999987 3555555544422 2333433444333322 22 1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhH
Q 017455 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 240 (371)
Q Consensus 161 ~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~ 240 (371)
+.++.+...+...|.+.. .....++||+.++|+.|+++|++++|+||+ .....+.+++++|+..+|+.+ ++.+++
T Consensus 71 ~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~---~~~~~~~~l~~~~l~~~f~~~-~~~~~~ 145 (226)
T PRK13222 71 ELLEKLRELFDRHYAENV-AGGSRLYPGVKETLAALKAAGYPLAVVTNK---PTPFVAPLLEALGIADYFSVV-IGGDSL 145 (226)
T ss_pred HHHHHHHHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHcCCccCccEE-EcCCCC
Confidence 223444455555555544 234679999999999999999999999994 477888999999999888763 332221
Q ss_pred HhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcE
Q 017455 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (371)
Q Consensus 241 ~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~ 320 (371)
. ..||+|++ |+.++++++++|++|
T Consensus 146 --------------~----------------------------~~kp~~~~--------------~~~~~~~~~~~~~~~ 169 (226)
T PRK13222 146 --------------P----------------------------NKKPDPAP--------------LLLACEKLGLDPEEM 169 (226)
T ss_pred --------------C----------------------------CCCcChHH--------------HHHHHHHcCCChhhe
Confidence 1 23788887 999999999999999
Q ss_pred EEEeCCHhhHHHHHHcCCcEEEECCCCCCCccc--ccccccchHHHHhhhh
Q 017455 321 FLIAGSQSGVAGAQRIGMPCVVMRSRCITTLPV--SKTQRLADMLCRILKS 369 (371)
Q Consensus 321 I~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l--~~~~~~~~~l~~~l~~ 369 (371)
++|||+.+|+++|+++||++|++.++.....++ ..++.+++++.++...
T Consensus 170 i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~ 220 (226)
T PRK13222 170 LFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPL 220 (226)
T ss_pred EEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHHHH
Confidence 999999999999999999999999876533333 3455677777665543
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=201.03 Aligned_cols=185 Identities=22% Similarity=0.302 Sum_probs=137.9
Q ss_pred ceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHHHH
Q 017455 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (371)
Q Consensus 84 ~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 163 (371)
+|+|+||+||||+|+... +..+|..+++++|.+ ++.+....+. +.........++.+.+... + ...+
T Consensus 1 ~~~iiFD~DGTL~ds~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~--~----~~~~ 67 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPL-HAQAWKHLADKYGIE---FDKQYNTSLG---GLSREDILRAILKLRKPGL--S----LETI 67 (185)
T ss_pred CCeEEEcCCCcccCChHH-HHHHHHHHHHHcCCC---CCHHHHHHcC---CCCHHHHHHHHHHhcCCCC--C----HHHH
Confidence 479999999999999987 899999999999986 4432222222 1122334445555553221 2 1223
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhh
Q 017455 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243 (371)
Q Consensus 164 ~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~ 243 (371)
..+.+.+.+.+.+.+......++||+.++|+.|+++|++++++||+ ..++..++.+|+.++|+.++ ++++..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~-----~~~~~~l~~~~l~~~f~~v~-~~~~~~-- 139 (185)
T TIGR02009 68 HQLAERKNELYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS-----KNADRILAKLGLTDYFDAIV-DADEVK-- 139 (185)
T ss_pred HHHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc-----hhHHHHHHHcChHHHCCEee-ehhhCC--
Confidence 4455555556655553345789999999999999999999999993 55788899999999998753 322221
Q ss_pred hhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEE
Q 017455 244 LYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLI 323 (371)
Q Consensus 244 ~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~I 323 (371)
..||+|++ |+.+++++|++|++||+|
T Consensus 140 ----------------------------------------~~kp~~~~--------------~~~~~~~~~~~~~~~v~I 165 (185)
T TIGR02009 140 ----------------------------------------EGKPHPET--------------FLLAAELLGVSPNECVVF 165 (185)
T ss_pred ----------------------------------------CCCCChHH--------------HHHHHHHcCCCHHHeEEE
Confidence 23788888 999999999999999999
Q ss_pred eCCHhhHHHHHHcCCcEEEE
Q 017455 324 AGSQSGVAGAQRIGMPCVVM 343 (371)
Q Consensus 324 gDs~~Di~aA~~aGm~~v~v 343 (371)
||+.+|+++|+++||++|+|
T Consensus 166 gD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 166 EDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred eCcHhhHHHHHHCCCeEeeC
Confidence 99999999999999999875
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-25 Score=223.35 Aligned_cols=207 Identities=19% Similarity=0.262 Sum_probs=155.0
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHH
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (371)
..+++||||+||||+|+... +..+|+.+++++|.. |+.+......+ .....+...++.+++.+..
T Consensus 9 ~~ik~VIFDlDGTLvDt~~~-~~~a~~~~~~~~G~~---~~~~~~~~~~G---~~~~~~~~~~~~~~~~~~~-------- 73 (382)
T PLN02940 9 KLVSHVILDLDGTLLNTDGI-VSDVLKAFLVKYGKQ---WDGREAQKIVG---KTPLEAAATVVEDYGLPCS-------- 73 (382)
T ss_pred ccCCEEEECCcCcCCcCHHH-HHHHHHHHHHHcCCC---CCHHHHHHhcC---CCHHHHHHHHHHHhCCCCC--------
Confidence 34899999999999999997 999999999999986 66655444432 2334455556677776532
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHH-HcCccccchheeecchhH
Q 017455 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVE-KLGSERISKIKIVGNEEV 240 (371)
Q Consensus 162 ~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~-~lgl~~~f~~~i~~~~~~ 240 (371)
.+++...+.+.+.+.. ....++||+.++|+.|+++|++++|+||+. ...+...++ .+|+.++|+.++ +++++
T Consensus 74 -~~~~~~~~~~~~~~~~--~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~---~~~~~~~l~~~~gl~~~Fd~ii-~~d~v 146 (382)
T PLN02940 74 -TDEFNSEITPLLSEQW--CNIKALPGANRLIKHLKSHGVPMALASNSP---RANIEAKISCHQGWKESFSVIV-GGDEV 146 (382)
T ss_pred -HHHHHHHHHHHHHHHH--ccCCCCcCHHHHHHHHHHCCCcEEEEeCCc---HHHHHHHHHhccChHhhCCEEE-ehhhc
Confidence 1233334444444332 246799999999999999999999999954 667777776 789999998753 33332
Q ss_pred HhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcE
Q 017455 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (371)
Q Consensus 241 ~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~ 320 (371)
. ..||+|++ |+.+++++|++|++|
T Consensus 147 ~------------------------------------------~~KP~p~~--------------~~~a~~~lgv~p~~~ 170 (382)
T PLN02940 147 E------------------------------------------KGKPSPDI--------------FLEAAKRLNVEPSNC 170 (382)
T ss_pred C------------------------------------------CCCCCHHH--------------HHHHHHHcCCChhHE
Confidence 1 23888888 999999999999999
Q ss_pred EEEeCCHhhHHHHHHcCCcEEEECCCCCCCcccccccccchHHHHh
Q 017455 321 FLIAGSQSGVAGAQRIGMPCVVMRSRCITTLPVSKTQRLADMLCRI 366 (371)
Q Consensus 321 I~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l~~~~~~~~~l~~~ 366 (371)
|+|||+.+|+++|+++||++|++.++.........++.+++++.+.
T Consensus 171 l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~sl~el 216 (382)
T PLN02940 171 LVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDL 216 (382)
T ss_pred EEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCCHhHc
Confidence 9999999999999999999999998755443445556666666553
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.8e-25 Score=203.51 Aligned_cols=208 Identities=16% Similarity=0.134 Sum_probs=136.4
Q ss_pred ceEEEEecCCccccccccCcHHHHHHH---HHHcCCCCCCCChHHHHHHHH----hhcCChHHHHHHHHHHcCCCCCCCc
Q 017455 84 DLAVLLEVDGVLVDAYRFGNRQAFNVA---FQKLGLDCANWTAPIYTDLLR----KSAGDEDRMLVLFFNRIGWPTSVPT 156 (371)
Q Consensus 84 ~kaviFD~DGTL~d~~~~~~~~a~~~~---~~~~g~~~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~g~~~~~~~ 156 (371)
+++|+||+||||+|+... +..+|..+ +..+|++ ++.+.+...+. ............+..+++....
T Consensus 2 ~~~viFDlDGTL~ds~~~-~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 74 (221)
T TIGR02253 2 IKAIFFDLDDTLIDTSGL-AEKARRNAIEVLIEAGLN---VDFEEAYEELLKLIKEYGSNYPTHFDYLIRRLWEEYN--- 74 (221)
T ss_pred ceEEEEeCCCCCcCCCCc-cCHHHHHHHHHHHHCCCc---CCHHHHHHHHHHHHHHhccccCcchHHHHHHHhhhcC---
Confidence 789999999999999986 77777655 4566765 34333332221 1111000001111122211100
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeec
Q 017455 157 NEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVG 236 (371)
Q Consensus 157 ~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~ 236 (371)
.+.+ ......+.... ....+++||+.++|+.|+++|++++|+||+ ....+...++++|+..+|+.++.+
T Consensus 75 ------~~~~-~~~~~~~~~~~-~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~---~~~~~~~~l~~~~l~~~f~~i~~~ 143 (221)
T TIGR02253 75 ------PKLV-AAFVYAYHKLK-FAYLRVYPGVRDTLMELRESGYRLGIITDG---LPVKQWEKLERLGVRDFFDAVITS 143 (221)
T ss_pred ------HHHH-HHHHHHHHHHH-HHhCCCCCCHHHHHHHHHHCCCEEEEEeCC---chHHHHHHHHhCChHHhccEEEEe
Confidence 0011 11111222211 224679999999999999999999999994 366788889999999999875433
Q ss_pred chhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCC
Q 017455 237 NEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP 316 (371)
Q Consensus 237 ~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~ 316 (371)
. ++. ..||+|++ |+.+++++|++
T Consensus 144 ~-~~~------------------------------------------~~KP~~~~--------------~~~~~~~~~~~ 166 (221)
T TIGR02253 144 E-EEG------------------------------------------VEKPHPKI--------------FYAALKRLGVK 166 (221)
T ss_pred c-cCC------------------------------------------CCCCCHHH--------------HHHHHHHcCCC
Confidence 2 221 23788888 99999999999
Q ss_pred CCcEEEEeCCH-hhHHHHHHcCCcEEEECCCCCCCcc---cccccccchHHHHh
Q 017455 317 VRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCITTLP---VSKTQRLADMLCRI 366 (371)
Q Consensus 317 p~e~I~IgDs~-~Di~aA~~aGm~~v~v~~~~~~~~~---l~~~~~~~~~l~~~ 366 (371)
|++||||||+. +|+.+|+++||++|++.++...... ...++.+++++.++
T Consensus 167 ~~~~~~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~el 220 (221)
T TIGR02253 167 PEEAVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLREL 220 (221)
T ss_pred hhhEEEECCChHHHHHHHHHCCCEEEEECCCCCcccccccccCCCeeeCcHHhh
Confidence 99999999998 8999999999999999887653321 22344556665554
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-25 Score=213.95 Aligned_cols=207 Identities=16% Similarity=0.203 Sum_probs=152.2
Q ss_pred CCCCCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcch
Q 017455 79 QNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNE 158 (371)
Q Consensus 79 ~~~~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~ 158 (371)
..+..+++|||||||||+|++.. +..+|+++++++|.+ .++.+.+..+.+. ... .++.++++. ..+
T Consensus 57 ~~~~~~k~vIFDlDGTLiDS~~~-~~~a~~~~~~~~G~~--~~~~~~~~~~~g~---~~~----~i~~~~~~~----~~~ 122 (273)
T PRK13225 57 SYPQTLQAIIFDFDGTLVDSLPT-VVAIANAHAPDFGYD--PIDERDYAQLRQW---SSR----TIVRRAGLS----PWQ 122 (273)
T ss_pred hhhhhcCEEEECCcCccccCHHH-HHHHHHHHHHHCCCC--CCCHHHHHHHhCc---cHH----HHHHHcCCC----HHH
Confidence 34456899999999999999986 889999999999987 3666666655432 122 234444432 111
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecch
Q 017455 159 KKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNE 238 (371)
Q Consensus 159 ~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~ 238 (371)
.+.+.+.+.+.+.+.. ...+++||+.++|+.|+++|++++|+||+ ....+..+++.+|+.++|+.++ +++
T Consensus 123 ----~~~~~~~~~~~~~~~~--~~~~l~pg~~e~L~~L~~~gi~laIvSn~---~~~~~~~~L~~~gl~~~F~~vi-~~~ 192 (273)
T PRK13225 123 ----QARLLQRVQRQLGDCL--PALQLFPGVADLLAQLRSRSLCLGILSSN---SRQNIEAFLQRQGLRSLFSVVQ-AGT 192 (273)
T ss_pred ----HHHHHHHHHHHHHhhc--ccCCcCCCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHcCChhheEEEE-ecC
Confidence 2233444444444432 35679999999999999999999999995 4788999999999999998643 221
Q ss_pred hHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCC
Q 017455 239 EVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVR 318 (371)
Q Consensus 239 ~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~ 318 (371)
++ +|.|+. |+.+++++|++|+
T Consensus 193 ~~---------------------------------------------~~k~~~--------------~~~~l~~~~~~p~ 213 (273)
T PRK13225 193 PI---------------------------------------------LSKRRA--------------LSQLVAREGWQPA 213 (273)
T ss_pred CC---------------------------------------------CCCHHH--------------HHHHHHHhCcChh
Confidence 11 111222 8999999999999
Q ss_pred cEEEEeCCHhhHHHHHHcCCcEEEECCCCCCCcccc--cccccchHHHHhhh
Q 017455 319 NCFLIAGSQSGVAGAQRIGMPCVVMRSRCITTLPVS--KTQRLADMLCRILK 368 (371)
Q Consensus 319 e~I~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l~--~~~~~~~~l~~~l~ 368 (371)
+|+||||+.+|+++|+++||.+|++.++......+. .++.+++++.++++
T Consensus 214 ~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~ 265 (273)
T PRK13225 214 AVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDLLQ 265 (273)
T ss_pred HEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHHHH
Confidence 999999999999999999999999998876554443 46677776666654
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.2e-25 Score=198.27 Aligned_cols=183 Identities=20% Similarity=0.265 Sum_probs=135.4
Q ss_pred CceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHHH
Q 017455 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (371)
Q Consensus 83 ~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~ 162 (371)
++++||||+||||+|+... +..+|.+++.++|.+ ++.+...... +.....+...++.+.+....
T Consensus 4 ~~~~viFD~DGTLiDs~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~--------- 67 (188)
T PRK10725 4 RYAGLIFDMDGTILDTEPT-HRKAWREVLGRYGLQ---FDEQAMVALN---GSPTWRIAQAIIELNQADLD--------- 67 (188)
T ss_pred cceEEEEcCCCcCccCHHH-HHHHHHHHHHHcCCC---CCHHHHHHhc---CCCHHHHHHHHHHHhCCCCC---------
Confidence 4789999999999999987 999999999999986 4444333222 12233344455555443322
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHh
Q 017455 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (371)
Q Consensus 163 ~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~ 242 (371)
.+.+...+...+.+.+ ....+++|| .++|..|++. ++++|+||+ ....+...++++|+.++|+.+ ++++++.
T Consensus 68 ~~~~~~~~~~~~~~~~-~~~~~~~~~-~e~L~~L~~~-~~l~I~T~~---~~~~~~~~l~~~~l~~~fd~i-~~~~~~~- 139 (188)
T PRK10725 68 PHALAREKTEAVKSML-LDSVEPLPL-IEVVKAWHGR-RPMAVGTGS---ESAIAEALLAHLGLRRYFDAV-VAADDVQ- 139 (188)
T ss_pred HHHHHHHHHHHHHHHH-hccCCCccH-HHHHHHHHhC-CCEEEEcCC---chHHHHHHHHhCCcHhHceEE-Eehhhcc-
Confidence 1123333334444443 334668887 5899999875 899999994 478899999999999999874 4433331
Q ss_pred hhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEE
Q 017455 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (371)
Q Consensus 243 ~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~ 322 (371)
..||+|++ |+.+++++|++|++||+
T Consensus 140 -----------------------------------------~~KP~p~~--------------~~~~~~~~~~~~~~~l~ 164 (188)
T PRK10725 140 -----------------------------------------HHKPAPDT--------------FLRCAQLMGVQPTQCVV 164 (188)
T ss_pred -----------------------------------------CCCCChHH--------------HHHHHHHcCCCHHHeEE
Confidence 23888888 99999999999999999
Q ss_pred EeCCHhhHHHHHHcCCcEEEEC
Q 017455 323 IAGSQSGVAGAQRIGMPCVVMR 344 (371)
Q Consensus 323 IgDs~~Di~aA~~aGm~~v~v~ 344 (371)
|||+.+|+++|+++||++|++.
T Consensus 165 igDs~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 165 FEDADFGIQAARAAGMDAVDVR 186 (188)
T ss_pred EeccHhhHHHHHHCCCEEEeec
Confidence 9999999999999999999986
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.9e-25 Score=201.81 Aligned_cols=198 Identities=21% Similarity=0.319 Sum_probs=144.7
Q ss_pred EEEecCCccccccccCcHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHHHHHH
Q 017455 87 VLLEVDGVLVDAYRFGNRQAFNVAFQK-LGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKN 165 (371)
Q Consensus 87 viFD~DGTL~d~~~~~~~~a~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 165 (371)
||||+||||+|+... +..+|++++++ +|.+ .++.+.+..+.+. ... .++..+|.+.. ..+.
T Consensus 1 iiFDlDGTL~Ds~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~---~~~----~~~~~~~~~~~--------~~~~ 62 (205)
T TIGR01454 1 VVFDLDGVLVDSFAV-MREAFAIAYREVVGDG--PAPFEEYRRHLGR---YFP----DIMRIMGLPLE--------MEEP 62 (205)
T ss_pred CeecCcCccccCHHH-HHHHHHHHHHHhcCCC--CCCHHHHHHHhCc---cHH----HHHHHcCCCHH--------HHHH
Confidence 699999999999997 99999999988 4765 2555655555432 122 22334443211 0011
Q ss_pred HHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhh
Q 017455 166 VLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLY 245 (371)
Q Consensus 166 l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f 245 (371)
.. ...+ .. ....+++||+.++|+.|+++|++++|+||+. ...+...++.+|+.++|+.++ +.++.
T Consensus 63 ~~---~~~~-~~--~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~---~~~~~~~l~~~~l~~~f~~i~-~~~~~----- 127 (205)
T TIGR01454 63 FV---RESY-RL--AGEVEVFPGVPELLAELRADGVGTAIATGKS---GPRARSLLEALGLLPLFDHVI-GSDEV----- 127 (205)
T ss_pred HH---HHHH-Hh--hcccccCCCHHHHHHHHHHCCCeEEEEeCCc---hHHHHHHHHHcCChhheeeEE-ecCcC-----
Confidence 11 1111 11 2357899999999999999999999999954 778889999999999988643 32221
Q ss_pred ccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeC
Q 017455 246 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAG 325 (371)
Q Consensus 246 ~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgD 325 (371)
. ..||+|++ |+.+++++|++|++|+||||
T Consensus 128 ---------~----------------------------~~KP~~~~--------------~~~~~~~~~~~~~~~l~igD 156 (205)
T TIGR01454 128 ---------P----------------------------RPKPAPDI--------------VREALRLLDVPPEDAVMVGD 156 (205)
T ss_pred ---------C----------------------------CCCCChHH--------------HHHHHHHcCCChhheEEEcC
Confidence 1 23788888 99999999999999999999
Q ss_pred CHhhHHHHHHcCCcEEEECCCCCCCcccc--cccccchHHHHhhh
Q 017455 326 SQSGVAGAQRIGMPCVVMRSRCITTLPVS--KTQRLADMLCRILK 368 (371)
Q Consensus 326 s~~Di~aA~~aGm~~v~v~~~~~~~~~l~--~~~~~~~~l~~~l~ 368 (371)
+.+|+.+|+++||++|++.++.....++. .++.+++++.++++
T Consensus 157 ~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~ 201 (205)
T TIGR01454 157 AVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSLLA 201 (205)
T ss_pred CHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHH
Confidence 99999999999999999998876655543 45667777766654
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-24 Score=207.70 Aligned_cols=214 Identities=17% Similarity=0.191 Sum_probs=151.7
Q ss_pred CceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHHH
Q 017455 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (371)
Q Consensus 83 ~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~ 162 (371)
-+|+|||||||||+|+... +..+|..+++++|.+. ++.+.+..+.+. ....+...++........++ +..
T Consensus 12 ~~k~viFDlDGTL~Ds~~~-~~~a~~~~~~~~g~~~--~~~~~~~~~~g~---~~~~~~~~~l~~~~~~~~~~----~~~ 81 (272)
T PRK13223 12 LPRLVMFDLDGTLVDSVPD-LAAAVDRMLLELGRPP--AGLEAVRHWVGN---GAPVLVRRALAGSIDHDGVD----DEL 81 (272)
T ss_pred cCCEEEEcCCCccccCHHH-HHHHHHHHHHHcCCCC--CCHHHHHHHhCh---hHHHHHHHHhcccccccCCC----HHH
Confidence 3679999999999999997 9999999999999873 444444444321 12222222221110001111 122
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHh
Q 017455 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (371)
Q Consensus 163 ~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~ 242 (371)
.+.+.+.+.+.|... .....++||+.++|+.|+++|++++|+||+ +...+...++++|+.++|+.+ ++++++
T Consensus 82 ~~~~~~~~~~~~~~~--~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~---~~~~~~~~l~~~~i~~~f~~i-~~~d~~-- 153 (272)
T PRK13223 82 AEQALALFMEAYADS--HELTVVYPGVRDTLKWLKKQGVEMALITNK---PERFVAPLLDQMKIGRYFRWI-IGGDTL-- 153 (272)
T ss_pred HHHHHHHHHHHHHhc--CcCCccCCCHHHHHHHHHHCCCeEEEEECC---cHHHHHHHHHHcCcHhhCeEE-EecCCC--
Confidence 334444444444432 124678999999999999999999999994 467888899999999888763 333222
Q ss_pred hhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEE
Q 017455 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (371)
Q Consensus 243 ~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~ 322 (371)
. ..||+|++ |+.+++++|++|++||+
T Consensus 154 ------------~----------------------------~~Kp~p~~--------------~~~~~~~~g~~~~~~l~ 179 (272)
T PRK13223 154 ------------P----------------------------QKKPDPAA--------------LLFVMKMAGVPPSQSLF 179 (272)
T ss_pred ------------C----------------------------CCCCCcHH--------------HHHHHHHhCCChhHEEE
Confidence 1 12788888 99999999999999999
Q ss_pred EeCCHhhHHHHHHcCCcEEEECCCCCCCcccc--cccccchHHHHhhh
Q 017455 323 IAGSQSGVAGAQRIGMPCVVMRSRCITTLPVS--KTQRLADMLCRILK 368 (371)
Q Consensus 323 IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l~--~~~~~~~~l~~~l~ 368 (371)
|||+.+||++|+++||+++++.+|+....++. .++.+++++.++++
T Consensus 180 IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~ 227 (272)
T PRK13223 180 VGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRALLP 227 (272)
T ss_pred ECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHHHH
Confidence 99999999999999999999988876554433 46667777777653
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-24 Score=198.83 Aligned_cols=207 Identities=14% Similarity=0.173 Sum_probs=143.0
Q ss_pred ceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhh--------cCC--hHHH----HHHHHHHcC
Q 017455 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKS--------AGD--EDRM----LVLFFNRIG 149 (371)
Q Consensus 84 ~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~--------~g~--~~~~----~~~~~~~~g 149 (371)
+|+|+||+||||+|+... +..+|.++++++|++ .+.+.+..+.... .|. .... +..++.+++
T Consensus 1 ~k~viFD~DGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQAA-EALALRLLFEDQGIP---LTEDMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSALLKEYN 76 (224)
T ss_pred CCEEEEcCcCcccccchH-HHHHHHHHHHHhCCC---ccHHHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHhC
Confidence 579999999999999986 788999999999976 3333322221110 000 0000 011222222
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcccc
Q 017455 150 WPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229 (371)
Q Consensus 150 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~ 229 (371)
.+.. .+.....|.+.. ....+++||+.++|+.|+++ ++++|+||+ ....+..+++.+|+..+
T Consensus 77 ~~~~-------------~~~~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~-~~~~i~Sn~---~~~~~~~~l~~~~l~~~ 138 (224)
T TIGR02254 77 TEAD-------------EALLNQKYLRFL-EEGHQLLPGAFELMENLQQK-FRLYIVTNG---VRETQYKRLRKSGLFPF 138 (224)
T ss_pred CCCc-------------HHHHHHHHHHHH-hccCeeCccHHHHHHHHHhc-CcEEEEeCC---chHHHHHHHHHCCcHhh
Confidence 2110 011223333333 22467999999999999999 999999995 47888899999999999
Q ss_pred chheeecchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHH
Q 017455 230 SKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAG 309 (371)
Q Consensus 230 f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a 309 (371)
|+.++.+.+.. ..||+|++ |+.+
T Consensus 139 fd~i~~~~~~~-------------------------------------------~~KP~~~~--------------~~~~ 161 (224)
T TIGR02254 139 FDDIFVSEDAG-------------------------------------------IQKPDKEI--------------FNYA 161 (224)
T ss_pred cCEEEEcCccC-------------------------------------------CCCCCHHH--------------HHHH
Confidence 98754433211 23888888 9999
Q ss_pred HHHc-CCCCCcEEEEeCCH-hhHHHHHHcCCcEEEECCCCCCCcccccccccchHHHHhhhh
Q 017455 310 AEYA-EKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCITTLPVSKTQRLADMLCRILKS 369 (371)
Q Consensus 310 ~~~l-gv~p~e~I~IgDs~-~Di~aA~~aGm~~v~v~~~~~~~~~l~~~~~~~~~l~~~l~~ 369 (371)
++++ |++|++||||||+. +|+.+|+++||++|++.++.........++.+++++.++++.
T Consensus 162 ~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~ 223 (224)
T TIGR02254 162 LERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRSLEELYEI 223 (224)
T ss_pred HHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECCHHHHHhh
Confidence 9999 99999999999998 799999999999999986543322223455677777776654
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.3e-24 Score=196.61 Aligned_cols=210 Identities=13% Similarity=0.167 Sum_probs=135.3
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhH-
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK- 160 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~- 160 (371)
|++|+|+||+||||+|.. ...++++++..+|.+ ++.+.+..+... + . .++..+ .... ....+..
T Consensus 1 m~~k~iiFDlDGTLid~~---~~~~~~~~~~~~g~~---~~~~~~~~~~~~--~-~-~~~~~~-~~~~----~~~~~~~~ 65 (224)
T PRK09449 1 MKYDWILFDADETLFHFD---AFAGLQRMFSRYGVD---FTAEDFQDYQAV--N-K-PLWVDY-QNGA----ITALQLQH 65 (224)
T ss_pred CCccEEEEcCCCchhcch---hhHHHHHHHHHhCCC---CcHHHHHHHHHH--H-H-HHHHHH-HcCC----CCHHHHHH
Confidence 468999999999999854 357888999999986 444444433211 1 0 011111 0000 0000000
Q ss_pred HHHHHHH-------HHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchhe
Q 017455 161 AFVKNVL-------QEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIK 233 (371)
Q Consensus 161 ~~~~~l~-------~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~ 233 (371)
...+.+. ....+.|.+.. ....+++||+.++|+.|+ +|++++|+||+ ........++.+|+.++|+.+
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~L~~L~-~~~~~~i~Tn~---~~~~~~~~l~~~~l~~~fd~v 140 (224)
T PRK09449 66 TRFESWAEKLNVTPGELNSAFLNAM-AEICTPLPGAVELLNALR-GKVKMGIITNG---FTELQQVRLERTGLRDYFDLL 140 (224)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHH-hhcCccCccHHHHHHHHH-hCCeEEEEeCC---cHHHHHHHHHhCChHHHcCEE
Confidence 0000000 11222333333 123679999999999999 58999999994 477888889999999999886
Q ss_pred eecchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHc
Q 017455 234 IVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA 313 (371)
Q Consensus 234 i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~l 313 (371)
+.+. ++. ..||+|++ |+.+++++
T Consensus 141 ~~~~-~~~------------------------------------------~~KP~p~~--------------~~~~~~~~ 163 (224)
T PRK09449 141 VISE-QVG------------------------------------------VAKPDVAI--------------FDYALEQM 163 (224)
T ss_pred EEEC-ccC------------------------------------------CCCCCHHH--------------HHHHHHHc
Confidence 5433 221 23888888 99999999
Q ss_pred CCC-CCcEEEEeCCH-hhHHHHHHcCCcEEEECCCCCCCcccccccccchHHHHhhh
Q 017455 314 EKP-VRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCITTLPVSKTQRLADMLCRILK 368 (371)
Q Consensus 314 gv~-p~e~I~IgDs~-~Di~aA~~aGm~~v~v~~~~~~~~~l~~~~~~~~~l~~~l~ 368 (371)
|+. +++|+||||+. +|+.+|+++||++|++..+......-..++.+++++.++++
T Consensus 164 ~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~ 220 (224)
T PRK09449 164 GNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSELEQ 220 (224)
T ss_pred CCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHHHH
Confidence 985 48999999998 69999999999999997432211111235566666666554
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.9e-24 Score=193.41 Aligned_cols=183 Identities=17% Similarity=0.228 Sum_probs=126.7
Q ss_pred eEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHH-HHHH---h----------hcCCh-H----HHHHHHH
Q 017455 85 LAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYT-DLLR---K----------SAGDE-D----RMLVLFF 145 (371)
Q Consensus 85 kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~-~~~~---~----------~~g~~-~----~~~~~~~ 145 (371)
|+|+||+||||+|+... +..+++++++++|++ ++.+... .+.. . ..|.. . .+....+
T Consensus 1 k~viFDlDGTL~d~~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 76 (203)
T TIGR02252 1 KLITFDAVGTLLALKEP-VGEVYCEIARKYGVE---VSPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDTF 76 (203)
T ss_pred CeEEEecCCceeeeCCC-HHHHHHHHHHHhCCC---CCHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 58999999999999886 899999999999997 3332222 1111 0 00212 1 1222233
Q ss_pred HHcCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcC
Q 017455 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLG 225 (371)
Q Consensus 146 ~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lg 225 (371)
...+.+.. . .+.......+..+.......++||+.++|+.|+++|++++|+||+. . .+...++.+|
T Consensus 77 ~~~~~~~~---~-------~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~---~-~~~~~l~~~~ 142 (203)
T TIGR02252 77 GRAGVPDP---E-------SFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFD---S-RLRGLLEALG 142 (203)
T ss_pred HhcCCCCc---h-------hHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCc---h-hHHHHHHHCC
Confidence 33442111 0 1222222222222212345789999999999999999999999953 3 3577889999
Q ss_pred ccccchheeecchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHH
Q 017455 226 SERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAA 305 (371)
Q Consensus 226 l~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~ 305 (371)
+.++|+.++.+. ++ +..||+|++
T Consensus 143 l~~~fd~i~~s~-~~------------------------------------------~~~KP~~~~-------------- 165 (203)
T TIGR02252 143 LLEYFDFVVTSY-EV------------------------------------------GAEKPDPKI-------------- 165 (203)
T ss_pred cHHhcceEEeec-cc------------------------------------------CCCCCCHHH--------------
Confidence 999998754433 21 123888888
Q ss_pred HHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCcEEE
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVV 342 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~-~Di~aA~~aGm~~v~ 342 (371)
|+.+++++|++|++||||||+. +||.+|+++||++|+
T Consensus 166 ~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 166 FQEALERAGISPEEALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred HHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence 9999999999999999999997 899999999999985
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.3e-24 Score=192.66 Aligned_cols=186 Identities=17% Similarity=0.235 Sum_probs=125.7
Q ss_pred ceEEEEecCCccccccccCcHHHHHHHHHHcCCCC-CCCChHHHHHHH-HhhcCCh-------HHHHHHHHHHcCCCCCC
Q 017455 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDC-ANWTAPIYTDLL-RKSAGDE-------DRMLVLFFNRIGWPTSV 154 (371)
Q Consensus 84 ~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~-~~~~~~~~~~~~-~~~~g~~-------~~~~~~~~~~~g~~~~~ 154 (371)
+|+|+||+||||+|+... ..++.+++...+... ..|-........ ....|.. ......++.++|....
T Consensus 1 ik~viFD~dgTLiD~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~- 77 (198)
T TIGR01428 1 IKALVFDVYGTLFDVHSV--VERFAELYGGRGEALSQLWRQKQLEYSWLRTLMGPYADFWDLTREALRYLLGRLGLEDD- 77 (198)
T ss_pred CcEEEEeCCCcCccHHHH--HHHHHHHhCchHHHHHHHHHHHHHHHHHHHHccCCCcCHHHHHHHHHHHHHHHcCCCCC-
Confidence 478999999999998863 455655554333210 001111111111 1112211 1223344555665422
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchhee
Q 017455 155 PTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKI 234 (371)
Q Consensus 155 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i 234 (371)
. ...+. +.+.. ...+++||+.++|+.|+++|++++|+||+ ....+...++++|+.++|+.++
T Consensus 78 -----~----~~~~~----~~~~~--~~~~~~~~~~~~L~~L~~~g~~~~i~Sn~---~~~~~~~~l~~~gl~~~fd~i~ 139 (198)
T TIGR01428 78 -----E----SAADR----LAEAY--LRLPPHPDVPAGLRALKERGYRLAILSNG---SPAMLKSLVKHAGLDDPFDAVL 139 (198)
T ss_pred -----H----HHHHH----HHHHH--hcCCCCCCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHCCChhhhheeE
Confidence 0 11111 22222 23568999999999999999999999995 4788889999999999998754
Q ss_pred ecchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcC
Q 017455 235 VGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE 314 (371)
Q Consensus 235 ~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lg 314 (371)
. ++++. ..||+|++ |+.+++++|
T Consensus 140 ~-s~~~~------------------------------------------~~KP~~~~--------------~~~~~~~~~ 162 (198)
T TIGR01428 140 S-ADAVR------------------------------------------AYKPAPQV--------------YQLALEALG 162 (198)
T ss_pred e-hhhcC------------------------------------------CCCCCHHH--------------HHHHHHHhC
Confidence 3 33321 23888888 999999999
Q ss_pred CCCCcEEEEeCCHhhHHHHHHcCCcEEEECCCC
Q 017455 315 KPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSRC 347 (371)
Q Consensus 315 v~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~~ 347 (371)
++|++|+||||+.+|+.+|+++||++|++..+.
T Consensus 163 ~~p~~~~~vgD~~~Di~~A~~~G~~~i~v~r~~ 195 (198)
T TIGR01428 163 VPPDEVLFVASNPWDLGGAKKFGFKTAWVNRPG 195 (198)
T ss_pred CChhhEEEEeCCHHHHHHHHHCCCcEEEecCCC
Confidence 999999999999999999999999999998643
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.91 E-value=9e-24 Score=215.92 Aligned_cols=210 Identities=10% Similarity=0.107 Sum_probs=147.5
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHHcCCC--CCCC-ChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcch
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLD--CANW-TAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNE 158 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~--~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~ 158 (371)
+.+++|||||||||+|+... +..+|++++.+++.. +..+ +.+.+...++ ......+..+..+.+..
T Consensus 239 ~m~k~vIFDlDGTLiDs~~~-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~G---~~~~~~~~~l~~~~~~~------- 307 (459)
T PRK06698 239 EMLQALIFDMDGTLFQTDKI-LELSLDDTFDHLRSLQLWDTVTPIDKYREIMG---VPLPKVWEALLPDHSLE------- 307 (459)
T ss_pred HhhhheeEccCCceecchhH-HHHHHHHHHHHHhhhcccCCCCCHHHHHHHcC---CChHHHHHHHhhhcchh-------
Confidence 34699999999999999997 999999999998521 0012 2343443332 22333333333322211
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecch
Q 017455 159 KKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNE 238 (371)
Q Consensus 159 ~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~ 238 (371)
..+.....+.+.+...+..+..+++||+.++|+.|+++|++++|+||+ ....+..+++.+|+.++|+.+ ++++
T Consensus 308 ---~~~~~~~~~~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~---~~~~~~~~l~~~~l~~~f~~i-~~~d 380 (459)
T PRK06698 308 ---IREQTDAYFLERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNG---LTEYLRAIVSYYDLDQWVTET-FSIE 380 (459)
T ss_pred ---HHHHHHHHHHHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCC---chHHHHHHHHHCCcHhhccee-EecC
Confidence 112333334444444443445789999999999999999999999994 488899999999999999874 3333
Q ss_pred hHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCC
Q 017455 239 EVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVR 318 (371)
Q Consensus 239 ~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~ 318 (371)
++. .||.|++ |..++++++ |+
T Consensus 381 ~v~-------------------------------------------~~~kP~~--------------~~~al~~l~--~~ 401 (459)
T PRK06698 381 QIN-------------------------------------------SLNKSDL--------------VKSILNKYD--IK 401 (459)
T ss_pred CCC-------------------------------------------CCCCcHH--------------HHHHHHhcC--cc
Confidence 321 1455556 888898875 78
Q ss_pred cEEEEeCCHhhHHHHHHcCCcEEEECCCCCCCcccccccccchHHHHhhh
Q 017455 319 NCFLIAGSQSGVAGAQRIGMPCVVMRSRCITTLPVSKTQRLADMLCRILK 368 (371)
Q Consensus 319 e~I~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l~~~~~~~~~l~~~l~ 368 (371)
+||+|||+.+|+.+|+++||.+|++.+++.....+..++.+++++.++++
T Consensus 402 ~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~ 451 (459)
T PRK06698 402 EAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLLELKG 451 (459)
T ss_pred eEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHHHH
Confidence 99999999999999999999999999877655555667777777766554
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-23 Score=195.72 Aligned_cols=130 Identities=16% Similarity=0.154 Sum_probs=101.9
Q ss_pred CCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchh
Q 017455 181 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (371)
Q Consensus 181 ~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~ 260 (371)
....++||+.++|+.|+++|++++|+||+ ....+...++.+|+.++|+.++.+. ++.
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~---~~~~~~~~l~~~~l~~~fd~iv~s~-~~~------------------- 146 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNA---HPHNLAVKLEHTGLDAHLDLLLSTH-TFG------------------- 146 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCc---CHHHHHHHHHHCCcHHHCCEEEEee-eCC-------------------
Confidence 34779999999999999999999999994 4778888899999999998754333 221
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCc-
Q 017455 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP- 339 (371)
Q Consensus 261 ~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~- 339 (371)
..||+|++ |+.+++++|++|++|+||||+..|+++|+++||+
T Consensus 147 -----------------------~~KP~p~~--------------~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~ 189 (224)
T PRK14988 147 -----------------------YPKEDQRL--------------WQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRY 189 (224)
T ss_pred -----------------------CCCCCHHH--------------HHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeE
Confidence 23888888 9999999999999999999999999999999998
Q ss_pred EEEECCCCCCCcccc-cccccchHHHHhhhhc
Q 017455 340 CVVMRSRCITTLPVS-KTQRLADMLCRILKSI 370 (371)
Q Consensus 340 ~v~v~~~~~~~~~l~-~~~~~~~~l~~~l~~i 370 (371)
+++|.++.....+.. .....++++.+.+..|
T Consensus 190 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l 221 (224)
T PRK14988 190 CLGVTNPDSGIAEKQYQRHPSLNDYRRLIPSL 221 (224)
T ss_pred EEEEeCCCCCccchhccCCCcHHHHHHHhhhh
Confidence 567877655432211 1223466666666554
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.2e-22 Score=222.95 Aligned_cols=209 Identities=19% Similarity=0.225 Sum_probs=150.6
Q ss_pred CCCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhH
Q 017455 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK 160 (371)
Q Consensus 81 ~~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~ 160 (371)
-+++++|||||||||+|+... +..+|+++++++|++ ++.+.+..+.+ .....+...+....+.+.. .. +
T Consensus 72 ~~~ikaVIFDlDGTLiDS~~~-~~~a~~~~~~~~G~~---it~e~~~~~~G---~~~~~~~~~~~~~~~l~~~-~~---~ 140 (1057)
T PLN02919 72 WGKVSAVLFDMDGVLCNSEEP-SRRAAVDVFAEMGVE---VTVEDFVPFMG---TGEANFLGGVASVKGVKGF-DP---D 140 (1057)
T ss_pred CCCCCEEEECCCCCeEeChHH-HHHHHHHHHHHcCCC---CCHHHHHHHhC---CCHHHHHHHHHHhcCCCCC-CH---H
Confidence 357899999999999999997 999999999999986 66666655443 2334444444444444311 10 1
Q ss_pred HHHHHHHHHHHHHHHHHHhc-CCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcc-ccchheeecch
Q 017455 161 AFVKNVLQEKKNALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE-RISKIKIVGNE 238 (371)
Q Consensus 161 ~~~~~l~~~~~~~~~~~l~~-~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~-~~f~~~i~~~~ 238 (371)
...+.+.+.|.+.+.. ....++||+.++|+.|+++|++++|+||+ ....+...++.+|+. .+|+.++ +.+
T Consensus 141 ----~~~~~~~~~~~~~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~---~~~~~~~~L~~~gl~~~~Fd~iv-~~~ 212 (1057)
T PLN02919 141 ----AAKKRFFEIYLEKYAKPNSGIGFPGALELITQCKNKGLKVAVASSA---DRIKVDANLAAAGLPLSMFDAIV-SAD 212 (1057)
T ss_pred ----HHHHHHHHHHHHHhhhcccCccCccHHHHHHHHHhCCCeEEEEeCC---cHHHHHHHHHHcCCChhHCCEEE-ECc
Confidence 2222233333332211 22347999999999999999999999995 477888899999996 7787643 332
Q ss_pred hHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCC
Q 017455 239 EVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVR 318 (371)
Q Consensus 239 ~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~ 318 (371)
++. ..||+|++ |+.+++++|++|+
T Consensus 213 ~~~------------------------------------------~~KP~Pe~--------------~~~a~~~lgv~p~ 236 (1057)
T PLN02919 213 AFE------------------------------------------NLKPAPDI--------------FLAAAKILGVPTS 236 (1057)
T ss_pred ccc------------------------------------------cCCCCHHH--------------HHHHHHHcCcCcc
Confidence 221 23888888 9999999999999
Q ss_pred cEEEEeCCHhhHHHHHHcCCcEEEECCCCCCCcccc--cccccchHHHH
Q 017455 319 NCFLIAGSQSGVAGAQRIGMPCVVMRSRCITTLPVS--KTQRLADMLCR 365 (371)
Q Consensus 319 e~I~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l~--~~~~~~~~l~~ 365 (371)
+||||||+..|+++|+++||++|++.++... .++. .++.+++++.+
T Consensus 237 e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~-~~L~~~~a~~vi~~l~e 284 (1057)
T PLN02919 237 ECVVIEDALAGVQAARAAGMRCIAVTTTLSE-EILKDAGPSLIRKDIGN 284 (1057)
T ss_pred cEEEEcCCHHHHHHHHHcCCEEEEECCCCCH-HHHhhCCCCEEECChHH
Confidence 9999999999999999999999999987633 3332 34455665544
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-22 Score=187.18 Aligned_cols=200 Identities=18% Similarity=0.276 Sum_probs=134.4
Q ss_pred cCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHHHHHHHHHHH
Q 017455 91 VDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEK 170 (371)
Q Consensus 91 ~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~ 170 (371)
|||||+|+... +..+|.++++++|++ ++.+.+..++ +.....++..+...++.+..... + .+....
T Consensus 1 ~DGTL~Ds~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~---G~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~ 66 (220)
T PLN02811 1 MDGLLLDTEKF-YTEVQEKILARYGKT---FDWSLKAKMM---GKKAIEAARIFVEESGLSDSLSP---E----DFLVER 66 (220)
T ss_pred CCCcceecHHH-HHHHHHHHHHHcCCC---CCHHHHHHcc---CCCHHHHHHHHHHHhCCCCCCCH---H----HHHHHH
Confidence 79999999997 999999999999986 4444433333 22333455566666665532111 1 122222
Q ss_pred HHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHH-HHHHHcCccccchheeecchhHHhhhhcccc
Q 017455 171 KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIAR-SVVEKLGSERISKIKIVGNEEVERSLYGQFV 249 (371)
Q Consensus 171 ~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~-~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v 249 (371)
...+.... ...+++||+.++|+.|+++|++++|+||+. ..... ..++..++.++|+.++ +.++.
T Consensus 67 ~~~~~~~~--~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~---~~~~~~~~~~~~~l~~~f~~i~-~~~~~--------- 131 (220)
T PLN02811 67 EAMLQDLF--PTSDLMPGAERLVRHLHAKGIPIAIATGSH---KRHFDLKTQRHGELFSLMHHVV-TGDDP--------- 131 (220)
T ss_pred HHHHHHHH--hhCCCCccHHHHHHHHHHCCCcEEEEeCCc---hhhHHHHHcccHHHHhhCCEEE-ECChh---------
Confidence 22222222 236789999999999999999999999954 33233 3333446777777643 33210
Q ss_pred ccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcC---CCCCcEEEEeCC
Q 017455 250 LGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE---KPVRNCFLIAGS 326 (371)
Q Consensus 250 ~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lg---v~p~e~I~IgDs 326 (371)
.+. ..||+|++ |+.+++++| ++|++||||||+
T Consensus 132 ---~~~----------------------------~~KP~p~~--------------~~~a~~~~~~~~~~~~~~v~IgDs 166 (220)
T PLN02811 132 ---EVK----------------------------QGKPAPDI--------------FLAAARRFEDGPVDPGKVLVFEDA 166 (220)
T ss_pred ---hcc----------------------------CCCCCcHH--------------HHHHHHHhCCCCCCccceEEEecc
Confidence 111 23888888 999999997 999999999999
Q ss_pred HhhHHHHHHcCCcEEEECCCCCCCcccccccccchHHH
Q 017455 327 QSGVAGAQRIGMPCVVMRSRCITTLPVSKTQRLADMLC 364 (371)
Q Consensus 327 ~~Di~aA~~aGm~~v~v~~~~~~~~~l~~~~~~~~~l~ 364 (371)
.+|+++|+++||++|++.++......+..++.+++++.
T Consensus 167 ~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~ 204 (220)
T PLN02811 167 PSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLL 204 (220)
T ss_pred HhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHh
Confidence 99999999999999999876544333334444444443
|
|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.2e-22 Score=187.44 Aligned_cols=210 Identities=14% Similarity=0.090 Sum_probs=134.3
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHHcCCC---CCCCChHHHHHHHHhhcC--C---------hHHHHHHHHHH
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLD---CANWTAPIYTDLLRKSAG--D---------EDRMLVLFFNR 147 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~---~~~~~~~~~~~~~~~~~g--~---------~~~~~~~~~~~ 147 (371)
.++|+|+||+||||+|+... +..+++++++.++.. ...|+...+..+...... . .......++.+
T Consensus 8 ~~~k~iiFDlDGTL~D~~~~-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 86 (238)
T PRK10748 8 GRISALTFDLDDTLYDNRPV-ILRTEQEALAFVQNYHPALRSFQNEDLQRLRQALREAEPEIYHDVTRWRWRAIEQAMLD 86 (238)
T ss_pred CCceeEEEcCcccccCChHH-HHHHHHHHHHHHHHhCcchhhCCHHHHHHHHHHHHHhCchhhCcHHHHHHHHHHHHHHH
Confidence 35799999999999999986 788888877655211 112443333333221110 0 01122334555
Q ss_pred cCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcc
Q 017455 148 IGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (371)
Q Consensus 148 ~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~ 227 (371)
+|.+.. + .+.........+.... ....++||+.++|+.|+++ ++++|+||+. .. ++.+|+.
T Consensus 87 ~g~~~~----~----~~~~~~~~~~~~~~~~--~~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~---~~-----~~~~gl~ 147 (238)
T PRK10748 87 AGLSAE----E----ASAGADAAMINFAKWR--SRIDVPQATHDTLKQLAKK-WPLVAITNGN---AQ-----PELFGLG 147 (238)
T ss_pred cCCCHH----H----HHHHHHHHHHHHHHHh--hcCCCCccHHHHHHHHHcC-CCEEEEECCC---ch-----HHHCCcH
Confidence 665321 0 0111112222222221 2367999999999999975 9999999954 22 4788999
Q ss_pred ccchheeecchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHH
Q 017455 228 RISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALR 307 (371)
Q Consensus 228 ~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~ 307 (371)
++|+.++.+. ++. ..||+|++ |+
T Consensus 148 ~~fd~i~~~~-~~~------------------------------------------~~KP~p~~--------------~~ 170 (238)
T PRK10748 148 DYFEFVLRAG-PHG------------------------------------------RSKPFSDM--------------YH 170 (238)
T ss_pred HhhceeEecc-cCC------------------------------------------cCCCcHHH--------------HH
Confidence 9998754332 221 23888888 99
Q ss_pred HHHHHcCCCCCcEEEEeCC-HhhHHHHHHcCCcEEEECCCCCCCc-cc---ccccccchHHHHhhh
Q 017455 308 AGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRSRCITTL-PV---SKTQRLADMLCRILK 368 (371)
Q Consensus 308 ~a~~~lgv~p~e~I~IgDs-~~Di~aA~~aGm~~v~v~~~~~~~~-~l---~~~~~~~~~l~~~l~ 368 (371)
.+++++|++|++||||||+ ..||.+|+++||++|++..+..... .. ..++..++++.+..+
T Consensus 171 ~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el~~ 236 (238)
T PRK10748 171 LAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRLLPHIEISRLASLTS 236 (238)
T ss_pred HHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCccccccccccCCCCEEECCHHHHHh
Confidence 9999999999999999999 5999999999999999976543211 11 123345666655543
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=99.89 E-value=8e-23 Score=178.58 Aligned_cols=175 Identities=22% Similarity=0.359 Sum_probs=127.6
Q ss_pred EEEecCCccccccccCcHHHHHH-HHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHHHHHH
Q 017455 87 VLLEVDGVLVDAYRFGNRQAFNV-AFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKN 165 (371)
Q Consensus 87 viFD~DGTL~d~~~~~~~~a~~~-~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 165 (371)
|+||+||||+++... +..+|.. +++.+|.+ ++.+.+.... ......+...++.+.+..
T Consensus 1 iifD~dgtL~d~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-------------- 59 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPA-IFRALQRLALEEFGLE---ISAEELRELF---GKSYEEALERLLERFGID-------------- 59 (176)
T ss_dssp EEEESBTTTEEHHHH-HHHHHHHHHHHHTTHH---HHHHHHHHHT---TSHHHHHHHHHHHHHHHH--------------
T ss_pred cEEECCCCcEeCHHH-HHHHHHHHHHHHhCCC---CCHHHHHHHh---CCCHHHHHHHhhhccchh--------------
Confidence 799999999999875 7788887 47777765 3223333322 112333444444433211
Q ss_pred HHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhh
Q 017455 166 VLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLY 245 (371)
Q Consensus 166 l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f 245 (371)
.....+.+.+.......+++||+.++|+.|+++|++++++||. ....+...++++|+.++|+.++.+. +..
T Consensus 60 -~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~---~~~~~~~~l~~~~~~~~f~~i~~~~-~~~---- 130 (176)
T PF13419_consen 60 -PEEIQELFREYNLESKLQPYPGVRELLERLKAKGIPLVIVSNG---SRERIERVLERLGLDDYFDEIISSD-DVG---- 130 (176)
T ss_dssp -HHHHHHHHHHHHHHGGEEESTTHHHHHHHHHHTTSEEEEEESS---EHHHHHHHHHHTTHGGGCSEEEEGG-GSS----
T ss_pred -HHHHHHHhhhhhhhhccchhhhhhhhhhhcccccceeEEeecC---Ccccccccccccccccccccccccc-hhh----
Confidence 2222333333322245779999999999999999999999994 4788889999999999998755433 221
Q ss_pred ccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeC
Q 017455 246 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAG 325 (371)
Q Consensus 246 ~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgD 325 (371)
..||+|++ |+.+++++|++|++||||||
T Consensus 131 --------------------------------------~~Kp~~~~--------------~~~~~~~~~~~p~~~~~vgD 158 (176)
T PF13419_consen 131 --------------------------------------SRKPDPDA--------------YRRALEKLGIPPEEILFVGD 158 (176)
T ss_dssp --------------------------------------SSTTSHHH--------------HHHHHHHHTSSGGGEEEEES
T ss_pred --------------------------------------hhhhHHHH--------------HHHHHHHcCCCcceEEEEeC
Confidence 23788888 99999999999999999999
Q ss_pred CHhhHHHHHHcCCcEEEE
Q 017455 326 SQSGVAGAQRIGMPCVVM 343 (371)
Q Consensus 326 s~~Di~aA~~aGm~~v~v 343 (371)
+..|+.+|+++||++|+|
T Consensus 159 ~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 159 SPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp SHHHHHHHHHTTSEEEEE
T ss_pred CHHHHHHHHHcCCeEEeC
Confidence 999999999999999986
|
... |
| >KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.7e-22 Score=182.24 Aligned_cols=190 Identities=22% Similarity=0.329 Sum_probs=143.5
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHH
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (371)
..+-+++||+||||+|++.. +..+|+..+.++|.. ++.......+ +.....+...++..+..+.+
T Consensus 8 ~~~~~~lfD~dG~lvdte~~-y~~~~~~~~~~ygk~---~~~~~~~~~m---G~~~~eaa~~~~~~~~dp~s-------- 72 (222)
T KOG2914|consen 8 LKVSACLFDMDGTLVDTEDL-YTEAWQELLDRYGKP---YPWDVKVKSM---GKRTSEAARLFVKKLPDPVS-------- 72 (222)
T ss_pred cceeeEEEecCCcEEecHHH-HHHHHHHHHHHcCCC---ChHHHHHHHc---CCCHHHHHHHHHhhcCCCCC--------
Confidence 34679999999999999998 899999999999985 4444444433 33566677777766666655
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcC-ccccchheeecchhH
Q 017455 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLG-SERISKIKIVGNEEV 240 (371)
Q Consensus 162 ~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lg-l~~~f~~~i~~~~~~ 240 (371)
.++...+..+...+++ ....+.||+.+|+..|+.+|++++++|+++ ........++++ +...|..++.+.
T Consensus 73 -~ee~~~e~~~~~~~~~--~~~~~~PGa~kLv~~L~~~gip~alat~s~---~~~~~~k~~~~~~~~~~f~~~v~~d--- 143 (222)
T KOG2914|consen 73 -REEFNKEEEEILDRLF--MNSILMPGAEKLVNHLKNNGIPVALATSST---SASFELKISRHEDIFKNFSHVVLGD--- 143 (222)
T ss_pred -HHHHHHHHHHHHHHhc--cccccCCcHHHHHHHHHhCCCCeeEEecCC---cccHHHHHHHhhHHHHhcCCCeecC---
Confidence 3455555555555555 346799999999999999999999999964 455556666554 444444333211
Q ss_pred HhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCC-Cc
Q 017455 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV-RN 319 (371)
Q Consensus 241 ~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p-~e 319 (371)
+..+..| ||+|++ |..+++++|..| +.
T Consensus 144 ----------~~~v~~g----------------------------KP~Pdi--------------~l~A~~~l~~~~~~k 171 (222)
T KOG2914|consen 144 ----------DPEVKNG----------------------------KPDPDI--------------YLKAAKRLGVPPPSK 171 (222)
T ss_pred ----------CccccCC----------------------------CCCchH--------------HHHHHHhcCCCCccc
Confidence 2333333 899999 999999999998 99
Q ss_pred EEEEeCCHhhHHHHHHcCCcEEEECCCC
Q 017455 320 CFLIAGSQSGVAGAQRIGMPCVVMRSRC 347 (371)
Q Consensus 320 ~I~IgDs~~Di~aA~~aGm~~v~v~~~~ 347 (371)
|++++|+..++++|++|||++|++.+..
T Consensus 172 ~lVfeds~~Gv~aa~aagm~vi~v~~~~ 199 (222)
T KOG2914|consen 172 CLVFEDSPVGVQAAKAAGMQVVGVATPD 199 (222)
T ss_pred eEEECCCHHHHHHHHhcCCeEEEecCCC
Confidence 9999999999999999999999999843
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-22 Score=185.39 Aligned_cols=109 Identities=14% Similarity=0.128 Sum_probs=86.0
Q ss_pred CCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchh
Q 017455 181 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (371)
Q Consensus 181 ~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~ 260 (371)
...+++||+.++|+.|+++|++++|+||+... .......+..+++.++|+.++.+++..
T Consensus 91 ~~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~-~~~~~~~~~~~~l~~~fd~v~~s~~~~-------------------- 149 (211)
T TIGR02247 91 ENTKLRPSMMAAIKTLRAKGFKTACITNNFPT-DHSAEEALLPGDIMALFDAVVESCLEG-------------------- 149 (211)
T ss_pred cccccChhHHHHHHHHHHCCCeEEEEeCCCCc-cchhhhHhhhhhhHhhCCEEEEeeecC--------------------
Confidence 35779999999999999999999999995411 111222344567788888755433211
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcE
Q 017455 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (371)
Q Consensus 261 ~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~ 340 (371)
..||+|++ |+.+++++|++|++|+||||+..|+.+|+++||++
T Consensus 150 -----------------------~~KP~p~~--------------~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 150 -----------------------LRKPDPRI--------------YQLMLERLGVAPEECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred -----------------------CCCCCHHH--------------HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEE
Confidence 23888888 99999999999999999999999999999999999
Q ss_pred EEECCCC
Q 017455 341 VVMRSRC 347 (371)
Q Consensus 341 v~v~~~~ 347 (371)
|++.++.
T Consensus 193 i~v~~~~ 199 (211)
T TIGR02247 193 IKVSDEE 199 (211)
T ss_pred EEECCHH
Confidence 9998643
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.7e-21 Score=176.92 Aligned_cols=184 Identities=13% Similarity=0.086 Sum_probs=124.2
Q ss_pred eEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCC-h----HHHHHHHHHHcCCCCCCCcchh
Q 017455 85 LAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGD-E----DRMLVLFFNRIGWPTSVPTNEK 159 (371)
Q Consensus 85 kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~-~----~~~~~~~~~~~g~~~~~~~~~~ 159 (371)
++|||||||||+|+... +..+|+++++.+|.. ..+.+.+..+.+..... . ......++............+
T Consensus 1 ~~viFD~DGTLiDs~~~-~~~a~~~~~~~~g~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 76 (197)
T TIGR01548 1 QALVLDMDGVMADVSQS-YRRAIIDTVEHFGGV--SVTHADIDHTKLAGNANNDWQLTHRLVVDGLNSASSERVRDAPT- 76 (197)
T ss_pred CceEEecCceEEechHH-HHHHHHHHHHHHcCC--CCCHHHHHHHHHccCccCchHHHHHHHHHhhhcccchhccCCcc-
Confidence 37999999999999997 999999999999854 36667666666431110 0 011111221111000000111
Q ss_pred HHHHHHHHHHHHHHHHHHHhc--------CCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccch
Q 017455 160 KAFVKNVLQEKKNALDEFLAS--------KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK 231 (371)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~l~~--------~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~ 231 (371)
.+.+.+.+.+.|.+.... ....+.+++.++|+.|+++|++++|+||+ ....+..+++.+|+.++|+
T Consensus 77 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~g~~~~i~T~~---~~~~~~~~l~~~gl~~~f~ 150 (197)
T TIGR01548 77 ---LEAVTAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRELHRAPKGMAVVTGR---PRKDAAKFLTTHGLEILFP 150 (197)
T ss_pred ---HHHHHHHHHHHHcCCcccccccchhhhccccccCHHHHHHHHHHcCCcEEEECCC---CHHHHHHHHHHcCchhhCC
Confidence 123333333333321100 12346677799999999999999999994 4788999999999999998
Q ss_pred heeecchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHH
Q 017455 232 IKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAE 311 (371)
Q Consensus 232 ~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~ 311 (371)
.++ +.+++. . ||+|++ |..+++
T Consensus 151 ~~~-~~~~~~------------------------------------------~-KP~p~~--------------~~~~~~ 172 (197)
T TIGR01548 151 VQI-WMEDCP------------------------------------------P-KPNPEP--------------LILAAK 172 (197)
T ss_pred EEE-eecCCC------------------------------------------C-CcCHHH--------------HHHHHH
Confidence 643 332221 2 788877 999999
Q ss_pred HcCCCCCcEEEEeCCHhhHHHHHHc
Q 017455 312 YAEKPVRNCFLIAGSQSGVAGAQRI 336 (371)
Q Consensus 312 ~lgv~p~e~I~IgDs~~Di~aA~~a 336 (371)
++|++|++||+|||+.+|+.+|+++
T Consensus 173 ~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 173 ALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HhCcCcccEEEEeCCHHHHHHHHhC
Confidence 9999999999999999999999875
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.6e-21 Score=173.40 Aligned_cols=100 Identities=23% Similarity=0.325 Sum_probs=84.6
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHH
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~ 262 (371)
.+++||+.++|+.|+++|++++|+||+. ... ..++.++|+.++|+.++.+.+ . .
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~---~~~-~~~~~~~~l~~~f~~i~~~~~-~--------------~------- 137 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSP---RDH-AVLVQELGLRDLFDVVIFSGD-V--------------G------- 137 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCc---hHH-HHHHHhcCCHHHCCEEEEcCC-C--------------C-------
Confidence 6899999999999999999999999954 444 555666999999987654332 1 1
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 263 ~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
..||+|++ |+.+++++|++|++|++|||+..|+.+|+++||++|+
T Consensus 138 ---------------------~~KP~~~~--------------~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~~i~ 182 (183)
T TIGR01509 138 ---------------------RGKPDPDI--------------YLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMHTVL 182 (183)
T ss_pred ---------------------CCCCCHHH--------------HHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCEEEe
Confidence 23788888 9999999999999999999999999999999999997
Q ss_pred E
Q 017455 343 M 343 (371)
Q Consensus 343 v 343 (371)
|
T Consensus 183 v 183 (183)
T TIGR01509 183 V 183 (183)
T ss_pred C
Confidence 5
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1e-21 Score=176.28 Aligned_cols=177 Identities=15% Similarity=0.091 Sum_probs=117.2
Q ss_pred EEEEecCCccccccccCcHHHHHHHHH-----HcCCCCCCCChHHH-HHHHHhhcCChHHHHHHHHHHcCCCCCCCcchh
Q 017455 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQ-----KLGLDCANWTAPIY-TDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEK 159 (371)
Q Consensus 86 aviFD~DGTL~d~~~~~~~~a~~~~~~-----~~g~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~ 159 (371)
+||||+||||+|+... +..+|++++. .+|++. .+.+.. ..++... |.... ......+. +
T Consensus 2 ~viFDlDGTL~ds~~~-~~~~~~~~~~~~~~~~~g~~~--~~~~~l~~~~~~~~-g~~~~---~~~~~~~~----~---- 66 (184)
T TIGR01993 2 VWFFDLDNTLYPHSAG-IFLQIDRNITEFVAARLKLSE--EEARVLRKDYYREY-GTTLA---GLMILHEI----D---- 66 (184)
T ss_pred eEEEeCCCCCCCCccc-HHHHHHHHHHHHHHHHcCcCH--HHHHHHHHHHHHHH-chHHH---HHHHhhCC----C----
Confidence 7999999999999876 7788887654 456642 111111 1111111 21111 11122211 1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchh
Q 017455 160 KAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEE 239 (371)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~ 239 (371)
...+.+.+.+.......+++||+.++|+.|+ .+++|+||+ ....+...++.+|+..+|+.++.+. +
T Consensus 67 -------~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~---~~~~i~Tn~---~~~~~~~~l~~~gl~~~fd~i~~~~-~ 132 (184)
T TIGR01993 67 -------ADEYLRYVHGRLPYEKLKPDPELRNLLLRLP---GRKIIFTNG---DRAHARRALNRLGIEDCFDGIFCFD-T 132 (184)
T ss_pred -------HHHHHHHHhccCCHHhCCCCHHHHHHHHhCC---CCEEEEeCC---CHHHHHHHHHHcCcHhhhCeEEEee-c
Confidence 0112222222111124679999999999997 589999995 4788999999999999998754332 2
Q ss_pred HHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCc
Q 017455 240 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRN 319 (371)
Q Consensus 240 ~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e 319 (371)
..... ...||+|++ |+.+++++|++|++
T Consensus 133 ~~~~~--------------------------------------~~~KP~p~~--------------~~~~~~~~~~~~~~ 160 (184)
T TIGR01993 133 ANPDY--------------------------------------LLPKPSPQA--------------YEKALREAGVDPER 160 (184)
T ss_pred ccCcc--------------------------------------CCCCCCHHH--------------HHHHHHHhCCCccc
Confidence 21100 012788888 99999999999999
Q ss_pred EEEEeCCHhhHHHHHHcCCcEEEE
Q 017455 320 CFLIAGSQSGVAGAQRIGMPCVVM 343 (371)
Q Consensus 320 ~I~IgDs~~Di~aA~~aGm~~v~v 343 (371)
|+||||+..|+++|+++||++|+|
T Consensus 161 ~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 161 AIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred eEEEeCCHHHHHHHHHcCCEEeeC
Confidence 999999999999999999999975
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.6e-21 Score=176.12 Aligned_cols=106 Identities=12% Similarity=0.178 Sum_probs=85.9
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHH-cCccccchheeecchhHHhhhhccccccccccCCchhHH
Q 017455 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~-lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~ 262 (371)
+++||+.++|+.|+++|++++|+||+. .......+.. .++..+|+.++.++ ++.
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~---~~~~~~~~~~~~~l~~~fd~v~~s~-~~~--------------------- 138 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTN---RLHTTFWPEEYPEVRAAADHIYLSQ-DLG--------------------- 138 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCc---hhhHHHHHhhchhHHHhcCEEEEec-ccC---------------------
Confidence 489999999999999999999999954 4444444443 46777887754433 221
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 263 ~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
..||+|++ |+.+++++|++|++|+||||+..|+.+|+++||++|+
T Consensus 139 ---------------------~~KP~p~~--------------~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i~ 183 (199)
T PRK09456 139 ---------------------MRKPEARI--------------YQHVLQAEGFSAADAVFFDDNADNIEAANALGITSIL 183 (199)
T ss_pred ---------------------CCCCCHHH--------------HHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEEE
Confidence 23888888 9999999999999999999999999999999999999
Q ss_pred ECCCCCC
Q 017455 343 MRSRCIT 349 (371)
Q Consensus 343 v~~~~~~ 349 (371)
+.++...
T Consensus 184 ~~~~~~~ 190 (199)
T PRK09456 184 VTDKQTI 190 (199)
T ss_pred ecCCccH
Confidence 9876543
|
|
| >KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.8e-20 Score=173.99 Aligned_cols=203 Identities=14% Similarity=0.166 Sum_probs=142.8
Q ss_pred CCCCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHH----H----------HhhcC--ChHHHHH-
Q 017455 80 NPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDL----L----------RKSAG--DEDRMLV- 142 (371)
Q Consensus 80 ~~~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~----~----------~~~~g--~~~~~~~- 142 (371)
..+++|+|+||++|||+..... ....|.++.+.+|+.+ +....... + +...| ....++.
T Consensus 3 ~~~~iravtfD~~~tLl~~~~~-~~~~y~~i~~~~gl~~---~~~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww~~ 78 (237)
T KOG3085|consen 3 ELMRIRAVTFDAGGTLLATLPP-VMEVYCEIAEAYGLEY---DDSLIETIFRKDFKKMSEKGPFFGLYSGELTLSQWWPK 78 (237)
T ss_pred cccceEEEEEeCCCceeecCCc-cHHHHHHHHHHhCCCC---CHHHHhHhhhHHHHhhcccCCcccccCCcccHHHHHHH
Confidence 4578999999999999986654 6789999999999984 11221111 1 11112 2333433
Q ss_pred HHHHHcCCCCCCCcchhHHHHHHHHHHH-HHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHH
Q 017455 143 LFFNRIGWPTSVPTNEKKAFVKNVLQEK-KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVV 221 (371)
Q Consensus 143 ~~~~~~g~~~~~~~~~~~~~~~~l~~~~-~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l 221 (371)
.+...++.... +. .+.....+ ...|..+. ....+..+++.++++.||++|..++++||. +...+.++
T Consensus 79 lv~~~f~~~~~--~~-----~~~~~~~~~~~~~s~~~-~~~~~~~~~~~~~lq~lR~~g~~l~iisN~----d~r~~~~l 146 (237)
T KOG3085|consen 79 LVESTFGKAGI--DY-----EEELLENFSFRLFSTFA-PSAWKYLDGMQELLQKLRKKGTILGIISNF----DDRLRLLL 146 (237)
T ss_pred HHHHHhccccc--hh-----HHHHHhhhhhheecccc-ccCceeccHHHHHHHHHHhCCeEEEEecCC----cHHHHHHh
Confidence 23333332211 00 01111111 12222211 124567889999999999999999999995 45667899
Q ss_pred HHcCccccchheeecchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHH
Q 017455 222 EKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDK 301 (371)
Q Consensus 222 ~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~ 301 (371)
..+|+..+||+++.|++.+.. ||+|.|
T Consensus 147 ~~~~l~~~fD~vv~S~e~g~~-------------------------------------------KPDp~I---------- 173 (237)
T KOG3085|consen 147 LPLGLSAYFDFVVESCEVGLE-------------------------------------------KPDPRI---------- 173 (237)
T ss_pred hccCHHHhhhhhhhhhhhccC-------------------------------------------CCChHH----------
Confidence 999999999999988866543 999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCcEEEECCCCCCCccccc
Q 017455 302 IVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCITTLPVSK 355 (371)
Q Consensus 302 ~~~~~~~a~~~lgv~p~e~I~IgDs~-~Di~aA~~aGm~~v~v~~~~~~~~~l~~ 355 (371)
|+.+++++|+.|++|+||||.. +|+++|+++||++++|.+..+....++.
T Consensus 174 ----f~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~~~~~~~~ 224 (237)
T KOG3085|consen 174 ----FQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSITALKELEY 224 (237)
T ss_pred ----HHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEccccchhhhhhh
Confidence 9999999999999999999997 5899999999999999877666555543
|
|
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.4e-20 Score=173.46 Aligned_cols=126 Identities=15% Similarity=0.147 Sum_probs=100.5
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhH
Q 017455 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (371)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~ 261 (371)
..+++|++.++|+.++++ ++++|+||+ ........+.++|+.++|+.++++++.+
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg---~~~~~~~~l~~~gl~~~Fd~v~~s~~~g--------------------- 151 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNG---ARPHQERKLRQLGLLDYFDAVFISEDVG--------------------- 151 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCC---ChHHHHHHHHHcCChhhhheEEEecccc---------------------
Confidence 367999999999999999 999999994 4788999999999999999976655332
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHh-hHHHHHHcCCcE
Q 017455 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQS-GVAGAQRIGMPC 340 (371)
Q Consensus 262 ~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~-Di~aA~~aGm~~ 340 (371)
..||+|++ |+.+++++|++|++|+||||+.. ||.+|+++||++
T Consensus 152 ----------------------~~KP~~~~--------------f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~ 195 (229)
T COG1011 152 ----------------------VAKPDPEI--------------FEYALEKLGVPPEEALFVGDSLENDILGARALGMKT 195 (229)
T ss_pred ----------------------cCCCCcHH--------------HHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEE
Confidence 33888888 99999999999999999999975 679999999999
Q ss_pred EEECCCCCCC-cccccccccchHHHHhhh
Q 017455 341 VVMRSRCITT-LPVSKTQRLADMLCRILK 368 (371)
Q Consensus 341 v~v~~~~~~~-~~l~~~~~~~~~l~~~l~ 368 (371)
|++..+.... ......+..+.++-+.++
T Consensus 196 vwi~~~~~~~~~~~~~~~~~i~~l~~l~~ 224 (229)
T COG1011 196 VWINRGGKPLPDALEAPDYEISSLAELLD 224 (229)
T ss_pred EEECCCCCCCCCCccCCceEEcCHHHHHH
Confidence 9998665422 111333445444444443
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.5e-20 Score=168.99 Aligned_cols=192 Identities=13% Similarity=0.131 Sum_probs=120.3
Q ss_pred ceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHHHH
Q 017455 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (371)
Q Consensus 84 ~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 163 (371)
+|+||||+||||+|+. .++..+++++|++ . +.+....+ +..... +...++. + ....
T Consensus 2 ~k~viFDlDGTLiD~~-----~~~~~~~~~~g~~---~--~~~~~~~g---~~~~~~---~~~~~~~--~------~~~~ 57 (197)
T PHA02597 2 KPTILTDVDGVLLSWQ-----SGLPYFAQKYNIP---T--DHILKMIQ---DERFRD---PGELFGC--D------QELA 57 (197)
T ss_pred CcEEEEecCCceEchh-----hccHHHHHhcCCC---H--HHHHHHHh---HhhhcC---HHHHhcc--c------HHHH
Confidence 6899999999999954 3467788888875 2 23222222 111111 1122221 1 1111
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhh
Q 017455 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243 (371)
Q Consensus 164 ~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~ 243 (371)
.++.+.+.+ ... ....+++||+.++|+.|+++ ++++++||+. .......+..+++..+|...
T Consensus 58 ~~~~~~~~~---~~~-~~~~~~~pG~~e~L~~L~~~-~~~~i~Tn~~---~~~~~~~~~~~~l~~~f~~~---------- 119 (197)
T PHA02597 58 KKLIEKYNN---SDF-IRYLSAYDDALDVINKLKED-YDFVAVTALG---DSIDALLNRQFNLNALFPGA---------- 119 (197)
T ss_pred HHHhhhhhH---HHH-HHhccCCCCHHHHHHHHHhc-CCEEEEeCCc---cchhHHHHhhCCHHHhCCCc----------
Confidence 222222221 111 23366999999999999987 5788889854 44555567788887665321
Q ss_pred hhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEE
Q 017455 244 LYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLI 323 (371)
Q Consensus 244 ~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~I 323 (371)
|+.++.++. .||.|++ |+.+++++| |++||||
T Consensus 120 -f~~i~~~~~-------------------------------~~~kp~~--------------~~~a~~~~~--~~~~v~v 151 (197)
T PHA02597 120 -FSEVLMCGH-------------------------------DESKEKL--------------FIKAKEKYG--DRVVCFV 151 (197)
T ss_pred -ccEEEEecc-------------------------------CcccHHH--------------HHHHHHHhC--CCcEEEe
Confidence 222222221 1455566 999999999 8999999
Q ss_pred eCCHhhHHHHHHc--CCcEEEECCCCCCCcccccccccchHHHHhh
Q 017455 324 AGSQSGVAGAQRI--GMPCVVMRSRCITTLPVSKTQRLADMLCRIL 367 (371)
Q Consensus 324 gDs~~Di~aA~~a--Gm~~v~v~~~~~~~~~l~~~~~~~~~l~~~l 367 (371)
||+..|+.+|+++ ||++|++.++.. ...+...+.+.++.|++
T Consensus 152 gDs~~di~aA~~a~~Gi~~i~~~~~~~--~~~~~~~~~~~~~~~~~ 195 (197)
T PHA02597 152 DDLAHNLDAAHEALSQLPVIHMLRGER--DHIPKLAHRVKSWNDIE 195 (197)
T ss_pred CCCHHHHHHHHHHHcCCcEEEecchhh--ccccchhhhhccHHHHh
Confidence 9999999999999 999999988854 22333345555555543
|
2 hypothetical protein; Provisional |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.3e-19 Score=166.73 Aligned_cols=183 Identities=16% Similarity=0.192 Sum_probs=114.9
Q ss_pred CCCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhH
Q 017455 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK 160 (371)
Q Consensus 81 ~~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~ 160 (371)
.+++|+++|||||||++++. +..++..+|.+. ...+.+.... .| ...+...+..++..-...+
T Consensus 11 ~~~~k~iiFD~DGTL~~~~~------~~~l~~~~g~~~--~~~~~~~~~~---~g-~~~~~~~~~~~~~~~~~~~----- 73 (219)
T TIGR00338 11 LRSKKLVVFDMDSTLINAET------IDEIAKIAGVEE--EVSEITERAM---RG-ELDFKASLRERVALLKGLP----- 73 (219)
T ss_pred hccCCEEEEeCcccCCCchH------HHHHHHHhCCHH--HHHHHHHHHH---cC-CCCHHHHHHHHHHHhCCCC-----
Confidence 45578999999999999753 356667777641 1111112211 12 1111111211211100100
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhH
Q 017455 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 240 (371)
Q Consensus 161 ~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~ 240 (371)
.+.+.... ...+++||+.++|+.|+++|++++|+|| +....+..+++.+|+.++|...+...+..
T Consensus 74 ----------~~~~~~~~--~~~~~~~g~~~~l~~l~~~g~~~~IvS~---~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 138 (219)
T TIGR00338 74 ----------VELLKEVR--ENLPLTEGAEELVKTLKEKGYKVAVISG---GFDLFAEHVKDKLGLDAAFANRLEVEDGK 138 (219)
T ss_pred ----------HHHHHHHH--hcCCcCCCHHHHHHHHHHCCCEEEEECC---CcHHHHHHHHHHcCCCceEeeEEEEECCE
Confidence 01122222 2356999999999999999999999999 44788999999999998886544332111
Q ss_pred HhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcE
Q 017455 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (371)
Q Consensus 241 ~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~ 320 (371)
+...+.|... ..+|.|.+ |+.+++++|++|++|
T Consensus 139 ----~~~~~~~~~~-----------------------------~~~~k~~~--------------~~~~~~~~~~~~~~~ 171 (219)
T TIGR00338 139 ----LTGLVEGPIV-----------------------------DASYKGKT--------------LLILLRKEGISPENT 171 (219)
T ss_pred ----EEEEecCccc-----------------------------CCcccHHH--------------HHHHHHHcCCCHHHE
Confidence 1111111110 01233444 999999999999999
Q ss_pred EEEeCCHhhHHHHHHcCCcEEE
Q 017455 321 FLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 321 I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
+||||+.+|+.+|+++|+.+++
T Consensus 172 i~iGDs~~Di~aa~~ag~~i~~ 193 (219)
T TIGR00338 172 VAVGDGANDLSMIKAAGLGIAF 193 (219)
T ss_pred EEEECCHHHHHHHHhCCCeEEe
Confidence 9999999999999999998765
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.5e-19 Score=155.86 Aligned_cols=154 Identities=21% Similarity=0.303 Sum_probs=108.8
Q ss_pred EEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHHHHHH
Q 017455 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKN 165 (371)
Q Consensus 86 aviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 165 (371)
+|+||+||||+|+... +..+|+++++++|.+ .+.+... .|.....+..+... .++
T Consensus 1 ~iifD~DGTL~d~~~~-~~~~~~~~~~~~~~~-----~~~~~~~----~g~~~~~~~~~~~~---------------~~~ 55 (154)
T TIGR01549 1 AILFDIDGTLVDSSFA-IRRAFEETLEEFGED-----FQALKAL----RGLAEELLYRIATS---------------FEE 55 (154)
T ss_pred CeEecCCCcccccHHH-HHHHHHHHHHHhccc-----HHHHHHH----HccChHHHHHHHHH---------------HHH
Confidence 4899999999999876 889999999998753 2222222 12111111111100 001
Q ss_pred HHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhh
Q 017455 166 VLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLY 245 (371)
Q Consensus 166 l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f 245 (371)
+.. . ......+||+.++|+.|+++|++++|+||+. ...+...++.+ +.++|+.++. .++.
T Consensus 56 --------~~~-~-~~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~---~~~~~~~~~~~-l~~~f~~i~~-~~~~----- 115 (154)
T TIGR01549 56 --------LLG-Y-DAEEAYIRGAADLLKRLKEAGIKLGIISNGS---LRAQKLLLRKH-LGDYFDLILG-SDEF----- 115 (154)
T ss_pred --------HhC-c-chhheeccCHHHHHHHHHHCcCeEEEEeCCc---hHHHHHHHHHH-HHhcCcEEEe-cCCC-----
Confidence 111 1 1234578999999999999999999999954 67778888877 7777765432 2111
Q ss_pred ccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeC
Q 017455 246 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAG 325 (371)
Q Consensus 246 ~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgD 325 (371)
. .||+|++ |+.+++++|++| +|+||||
T Consensus 116 ---------~-----------------------------~Kp~~~~--------------~~~~~~~~~~~~-~~l~iGD 142 (154)
T TIGR01549 116 ---------G-----------------------------AKPEPEI--------------FLAALESLGLPP-EVLHVGD 142 (154)
T ss_pred ---------C-----------------------------CCcCHHH--------------HHHHHHHcCCCC-CEEEEeC
Confidence 1 2788888 999999999999 9999999
Q ss_pred CHhhHHHHHHcC
Q 017455 326 SQSGVAGAQRIG 337 (371)
Q Consensus 326 s~~Di~aA~~aG 337 (371)
+..|+.+|+++|
T Consensus 143 s~~Di~aa~~aG 154 (154)
T TIGR01549 143 NLNDIEGARNAG 154 (154)
T ss_pred CHHHHHHHHHcc
Confidence 999999999998
|
HAD subfamilies caused by an overly broad single model. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.1e-19 Score=163.34 Aligned_cols=209 Identities=13% Similarity=0.140 Sum_probs=123.7
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHH
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (371)
+.+|+|+|||||||++++.. ..+++.+|... ..........++...+.+.+...++.... .
T Consensus 10 ~~~k~viFDfDGTL~~~~~~------~~~~~~~g~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~------ 70 (224)
T PLN02954 10 RSADAVCFDVDSTVCVDEGI------DELAEFCGAGE------AVAEWTAKAMGGSVPFEEALAARLSLFKP-S------ 70 (224)
T ss_pred ccCCEEEEeCCCcccchHHH------HHHHHHcCChH------HHHHHHHHHHCCCCCHHHHHHHHHHHcCC-C------
Confidence 45899999999999997653 77888888741 11222222222222233333332322110 0
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcc--ccchheeecchh
Q 017455 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE--RISKIKIVGNEE 239 (371)
Q Consensus 162 ~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~--~~f~~~i~~~~~ 239 (371)
.+. +.+.+......++||+.++|+.|+++|++++|+|+ +....+..+++.+|+. .+|...+...++
T Consensus 71 -----~~~----~~~~~~~~~~~l~pg~~e~l~~l~~~g~~~~IvS~---~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~ 138 (224)
T PLN02954 71 -----LSQ----VEEFLEKRPPRLSPGIPELVKKLRARGTDVYLVSG---GFRQMIAPVAAILGIPPENIFANQILFGDS 138 (224)
T ss_pred -----HHH----HHHHHHHccCCCCccHHHHHHHHHHCCCEEEEECC---CcHHHHHHHHHHhCCChhhEEEeEEEEcCC
Confidence 111 12222122356899999999999999999999999 4588999999999996 455433222211
Q ss_pred HHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCc
Q 017455 240 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRN 319 (371)
Q Consensus 240 ~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e 319 (371)
..+.|.... +|. +..+++|.+ ++.+++.+|. ++
T Consensus 139 -------g~~~g~~~~------------------------------~~~-----~~~~~K~~~---i~~~~~~~~~--~~ 171 (224)
T PLN02954 139 -------GEYAGFDEN------------------------------EPT-----SRSGGKAEA---VQHIKKKHGY--KT 171 (224)
T ss_pred -------CcEECccCC------------------------------Ccc-----cCCccHHHH---HHHHHHHcCC--Cc
Confidence 111221100 000 001112222 7888888885 69
Q ss_pred EEEEeCCHhhHHHHHHcCCcEEEECCCCCCCc-ccccccccchHHHHhhh
Q 017455 320 CFLIAGSQSGVAGAQRIGMPCVVMRSRCITTL-PVSKTQRLADMLCRILK 368 (371)
Q Consensus 320 ~I~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~-~l~~~~~~~~~l~~~l~ 368 (371)
||+|||+.+|+.+|+++|+.+++...+..... ....++.+++++.++++
T Consensus 172 ~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~ 221 (224)
T PLN02954 172 MVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDLIE 221 (224)
T ss_pred eEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHHHH
Confidence 99999999999999999998776543332222 12245667666666554
|
|
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.2e-20 Score=163.48 Aligned_cols=167 Identities=17% Similarity=0.191 Sum_probs=112.9
Q ss_pred EEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHH-HHHHHHhhcCChH---H----HHHHHHHHcCCCCCCCcc
Q 017455 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPI-YTDLLRKSAGDED---R----MLVLFFNRIGWPTSVPTN 157 (371)
Q Consensus 86 aviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~-~~~~~~~~~g~~~---~----~~~~~~~~~g~~~~~~~~ 157 (371)
+|+||+||||+|++.. +..+++.++...+.....|+... ...+.....|... . ....+..++|.+..
T Consensus 1 ~viFD~DGTL~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---- 75 (175)
T TIGR01493 1 AMVFDVYGTLVDVHGG-VRACLAAIAPEGGAFSDLWRAKQQEYSWRRSLMGDRRAFPEDTVRALRYIADRLGLDAE---- 75 (175)
T ss_pred CeEEecCCcCcccHHH-HHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHcCCCCC----
Confidence 5899999999999986 88888888776543100122211 1222222222111 1 33445566666532
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecc
Q 017455 158 EKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (371)
Q Consensus 158 ~~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~ 237 (371)
. ...+ .+.+.. ...+++||+.++|+ +++|+||+ ........++++|+.++|+.+ +++
T Consensus 76 --~----~~~~----~~~~~~--~~~~~~~g~~~~L~-------~~~i~Tn~---~~~~~~~~l~~~~l~~~fd~v-~~~ 132 (175)
T TIGR01493 76 --P----KYGE----RLRDAY--KNLPPWPDSAAALA-------RVAILSNA---SHWAFDQFAQQAGLPWYFDRA-FSV 132 (175)
T ss_pred --H----HHHH----HHHHHH--hcCCCCCchHHHHH-------HHhhhhCC---CHHHHHHHHHHCCCHHHHhhh-ccH
Confidence 1 1111 222221 23669999999998 48899995 478888999999999999874 444
Q ss_pred hhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCC
Q 017455 238 EEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV 317 (371)
Q Consensus 238 ~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p 317 (371)
+++. ..||+|++ |+.+++++|++|
T Consensus 133 ~~~~------------------------------------------~~KP~p~~--------------f~~~~~~~~~~p 156 (175)
T TIGR01493 133 DTVR------------------------------------------AYKPDPVV--------------YELVFDTVGLPP 156 (175)
T ss_pred hhcC------------------------------------------CCCCCHHH--------------HHHHHHHHCCCH
Confidence 4432 23888888 999999999999
Q ss_pred CcEEEEeCCHhhHHHHHHc
Q 017455 318 RNCFLIAGSQSGVAGAQRI 336 (371)
Q Consensus 318 ~e~I~IgDs~~Di~aA~~a 336 (371)
++||||||+.+||.+|+++
T Consensus 157 ~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 157 DRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHeEeEecChhhHHHHhcC
Confidence 9999999999999999864
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.9e-18 Score=153.42 Aligned_cols=114 Identities=12% Similarity=0.100 Sum_probs=88.0
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHH
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~ 262 (371)
.+++||+.++|+.|+++|++++|+|| +....+..+++.+|+..+|...+.+.+.+
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~---~~~~~~~~~l~~~g~~~~~~~~~~~~~~g---------------------- 133 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSG---GIMCLAKKVAEKLNPDYVYSNELVFDEKG---------------------- 133 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeC---CcHHHHHHHHHHhCCCeEEEEEEEEcCCC----------------------
Confidence 57999999999999999999999999 45889999999999988776554433211
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhccCcccc-CCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 017455 263 ATEARKAVSAQKQEIAEEVASMLKLSVDI-DTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (371)
Q Consensus 263 ~~~~~k~~~~~~~~~~~~~~~~~KP~p~i-~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v 341 (371)
..||++.. ++|. +..++ ++.+++++|+++++|+||||+.+|+.+|+.+|+.++
T Consensus 134 ---------------------~~~p~~~~~~~~~--~k~~~---~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a 187 (201)
T TIGR01491 134 ---------------------FIQPDGIVRVTFD--NKGEA---VERLKRELNPSLTETVAVGDSKNDLPMFEVADISIS 187 (201)
T ss_pred ---------------------eEecceeeEEccc--cHHHH---HHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEE
Confidence 11333322 1112 22233 788889999999999999999999999999999998
Q ss_pred EECCCC
Q 017455 342 VMRSRC 347 (371)
Q Consensus 342 ~v~~~~ 347 (371)
+.+++.
T Consensus 188 ~~~~~~ 193 (201)
T TIGR01491 188 LGDEGH 193 (201)
T ss_pred ECCCcc
Confidence 877554
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.3e-17 Score=152.08 Aligned_cols=191 Identities=13% Similarity=0.096 Sum_probs=117.8
Q ss_pred ceEEEEecCCccccccccCcHHHHH---HHHHHcCCCCCCCChHHHHHHHHhhcC-ChHHHHHHHHHHcCCCCCCCcchh
Q 017455 84 DLAVLLEVDGVLVDAYRFGNRQAFN---VAFQKLGLDCANWTAPIYTDLLRKSAG-DEDRMLVLFFNRIGWPTSVPTNEK 159 (371)
Q Consensus 84 ~kaviFD~DGTL~d~~~~~~~~a~~---~~~~~~g~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~g~~~~~~~~~~ 159 (371)
+++|+||+.||+.+.... ...-|- +.+.++--. .|..+........... ..+.+.+.+...+......+
T Consensus 1 ~~~~l~diegt~~~isfv-~~~lfpy~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~k~~---- 73 (220)
T TIGR01691 1 IKNVLLDIEGTTGSISFV-HDVLFPYAASRLESFVND--NYESTIVENLRELGKTPEELILLRKLHAEMDKDRKAT---- 73 (220)
T ss_pred CCEEEEecCCCcccHHHH-HhhhhHHHHHHHHHHHHH--hCCCHHHHHHHHhccCCcHHHHHHHHHHHHHcCCCcc----
Confidence 478999999999987643 222222 222221111 2443444443221111 11333333333332222111
Q ss_pred HHHHHHHHHH-HHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHc---Cccccchheee
Q 017455 160 KAFVKNVLQE-KKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL---GSERISKIKIV 235 (371)
Q Consensus 160 ~~~~~~l~~~-~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~l---gl~~~f~~~i~ 235 (371)
-.+.+... +.+.|... ....+++||+.++|+.|+++|++++|+||++ ......+++.+ ++.++|+..
T Consensus 74 --~lk~lqg~iw~~~Y~~~--~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s---~~~~~~~~~~~~~~~L~~~f~~~-- 144 (220)
T TIGR01691 74 --PLKTLQGLIWRQGYESG--ELTSHLYPDVPPALEAWLQLGLRLAVYSSGS---VPAQKLLFGHSDAGNLTPYFSGY-- 144 (220)
T ss_pred --hHHHHHHHHHHHHHhcC--CcccCcCcCHHHHHHHHHHCCCEEEEEeCCC---HHHHHHHHhhccccchhhhcceE--
Confidence 12233332 22333221 2346799999999999999999999999954 56666666665 555666542
Q ss_pred cchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCC
Q 017455 236 GNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK 315 (371)
Q Consensus 236 ~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv 315 (371)
|+.. . ..||+|++ |+.+++++|+
T Consensus 145 ---------fd~~-~---------------------------------g~KP~p~~--------------y~~i~~~lgv 167 (220)
T TIGR01691 145 ---------FDTT-V---------------------------------GLKTEAQS--------------YVKIAGQLGS 167 (220)
T ss_pred ---------EEeC-c---------------------------------ccCCCHHH--------------HHHHHHHhCc
Confidence 1110 0 12788888 9999999999
Q ss_pred CCCcEEEEeCCHhhHHHHHHcCCcEEEECCCC
Q 017455 316 PVRNCFLIAGSQSGVAGAQRIGMPCVVMRSRC 347 (371)
Q Consensus 316 ~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~~ 347 (371)
+|++|+||||+..|+++|+++||++|++.++.
T Consensus 168 ~p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g 199 (220)
T TIGR01691 168 PPREILFLSDIINELDAARKAGLHTGQLVRPG 199 (220)
T ss_pred ChhHEEEEeCCHHHHHHHHHcCCEEEEEECCC
Confidence 99999999999999999999999999987654
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.1e-17 Score=163.56 Aligned_cols=183 Identities=14% Similarity=0.156 Sum_probs=116.3
Q ss_pred CCCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhH
Q 017455 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK 160 (371)
Q Consensus 81 ~~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~ 160 (371)
..++++++|||||||+.. ..+.++++..|... ...........+...+.+.+..++..-...
T Consensus 107 ~~~~~LvvfDmDGTLI~~------e~i~eia~~~g~~~------~v~~it~~~m~Geldf~esl~~rv~~l~g~------ 168 (322)
T PRK11133 107 LRTPGLLVMDMDSTAIQI------ECIDEIAKLAGTGE------EVAEVTERAMRGELDFEASLRQRVATLKGA------ 168 (322)
T ss_pred ccCCCEEEEECCCCCcch------HHHHHHHHHhCCch------HHHHHHHHHHcCCcCHHHHHHHHHHHhCCC------
Confidence 456899999999999843 44567777777652 111111111112222322222222111000
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhH
Q 017455 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 240 (371)
Q Consensus 161 ~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~ 240 (371)
....+.... ..++++||+.++|+.|+++|++++|+|+ ++..+++.+++++|+++.+...+. +
T Consensus 169 ---------~~~il~~v~--~~l~l~pGa~elL~~Lk~~G~~~aIvSg---g~~~~~~~l~~~Lgld~~~an~le----i 230 (322)
T PRK11133 169 ---------DANILQQVR--ENLPLMPGLTELVLKLQALGWKVAIASG---GFTYFADYLRDKLRLDAAVANELE----I 230 (322)
T ss_pred ---------CHHHHHHHH--HhCCCChhHHHHHHHHHHcCCEEEEEEC---CcchhHHHHHHHcCCCeEEEeEEE----E
Confidence 001111111 2367999999999999999999999999 457778899999999875543221 1
Q ss_pred HhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcE
Q 017455 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (371)
Q Consensus 241 ~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~ 320 (371)
..+.+...+.|..+ .+ ||.+++ ++.+++++|+++++|
T Consensus 231 ~dg~ltg~v~g~iv-~~----------------------------k~K~~~--------------L~~la~~lgi~~~qt 267 (322)
T PRK11133 231 MDGKLTGNVLGDIV-DA----------------------------QYKADT--------------LTRLAQEYEIPLAQT 267 (322)
T ss_pred ECCEEEeEecCccC-Cc----------------------------ccHHHH--------------HHHHHHHcCCChhhE
Confidence 11122223333211 11 344444 999999999999999
Q ss_pred EEEeCCHhhHHHHHHcCCcEEE
Q 017455 321 FLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 321 I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
|+|||+.||+.|++.||+.+++
T Consensus 268 IaVGDg~NDl~m~~~AGlgiA~ 289 (322)
T PRK11133 268 VAIGDGANDLPMIKAAGLGIAY 289 (322)
T ss_pred EEEECCHHHHHHHHHCCCeEEe
Confidence 9999999999999999999888
|
|
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.8e-17 Score=149.97 Aligned_cols=189 Identities=16% Similarity=0.194 Sum_probs=129.3
Q ss_pred CCCceEEEEecCCccccccccCcHHHHH----H-HHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCC
Q 017455 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFN----V-AFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVP 155 (371)
Q Consensus 81 ~~~~kaviFD~DGTL~d~~~~~~~~a~~----~-~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~ 155 (371)
.+.+++++||+|.||+.... +...+.+ + +..++|++. .-..+....++...+ ..|.. +...|...+
T Consensus 12 ~~~~~~l~FDiDdtLYp~St-~i~~~~~~nI~~f~~eklgi~~-e~a~~L~~~~yk~YG---~t~aG--L~~~~~~~d-- 82 (244)
T KOG3109|consen 12 GPNYKCLFFDIDDTLYPLST-GIQLMMRNNIQEFFVEKLGISE-EEAEELRESLYKEYG---LTMAG--LKAVGYIFD-- 82 (244)
T ss_pred CccceEEEEecccccccCch-hHHHHHHHHHHHHHHHHhCCCh-hhhHHHHHHHHHHHh---HHHHH--HHHhcccCC--
Confidence 34799999999999998765 3444444 3 335688863 111112222221111 01111 112222221
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheee
Q 017455 156 TNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIV 235 (371)
Q Consensus 156 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~ 235 (371)
..++.+.....+.-+.++|-|..+.+|-.|++++ .++.|| ++...+.+++++||++++|+.++.
T Consensus 83 -----------~deY~~~V~~~LPlq~LkPD~~LRnlLL~l~~r~--k~~FTN---a~k~HA~r~Lk~LGieDcFegii~ 146 (244)
T KOG3109|consen 83 -----------ADEYHRFVHGRLPLQDLKPDPVLRNLLLSLKKRR--KWIFTN---AYKVHAIRILKKLGIEDCFEGIIC 146 (244)
T ss_pred -----------HHHHHHHhhccCcHhhcCCCHHHHHHHHhCcccc--EEEecC---CcHHHHHHHHHHhChHHhccceeE
Confidence 2344444555554456889999999999999875 789999 558999999999999999998643
Q ss_pred cchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccC--ccccCCCCCchhHHHHHHHHHHHHHc
Q 017455 236 GNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKL--SVDIDTSSPESLDKIVAALRAGAEYA 313 (371)
Q Consensus 236 ~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP--~p~i~~p~~~~~~~~~~~~~~a~~~l 313 (371)
-. - . -| .+-+|||+++ ||+.+.+..
T Consensus 147 ~e-~--------~-------------------------------------np~~~~~vcKP~~~-------afE~a~k~a 173 (244)
T KOG3109|consen 147 FE-T--------L-------------------------------------NPIEKTVVCKPSEE-------AFEKAMKVA 173 (244)
T ss_pred ee-c--------c-------------------------------------CCCCCceeecCCHH-------HHHHHHHHh
Confidence 21 1 1 13 4556788877 499999999
Q ss_pred CCC-CCcEEEEeCCHhhHHHHHHcCCcEEEECCCC
Q 017455 314 EKP-VRNCFLIAGSQSGVAGAQRIGMPCVVMRSRC 347 (371)
Q Consensus 314 gv~-p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~~ 347 (371)
|++ |.+|+||+||..+|++|++.||++|++...+
T Consensus 174 gi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~~ 208 (244)
T KOG3109|consen 174 GIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGREH 208 (244)
T ss_pred CCCCcCceEEEcCchhhHHHHHhccceeEEEEeee
Confidence 998 9999999999999999999999999997543
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.8e-17 Score=147.62 Aligned_cols=131 Identities=15% Similarity=0.051 Sum_probs=91.2
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEcCCCCC----C--------cHHHHHHHHHcCccccchheeecchhHHhhhhcccccc
Q 017455 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKS----G--------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLG 251 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~IvTn~~~~----~--------~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g 251 (371)
.++||+.++|+.|+++|++++|+||.+.. . .......++++|+ .|+.++.+.. ...
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~----------~~~ 96 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPH----------HPE 96 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCC----------CCC
Confidence 37899999999999999999999995410 0 1223445566665 2443322110 001
Q ss_pred ccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHH
Q 017455 252 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVA 331 (371)
Q Consensus 252 ~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~ 331 (371)
+.+. ..||+|++ |+.+++++|++|++|+||||+.+|+.
T Consensus 97 ~~~~----------------------------~~KP~p~~--------------~~~~~~~l~~~~~~~~~VgDs~~Di~ 134 (181)
T PRK08942 97 DGCD----------------------------CRKPKPGM--------------LLSIAERLNIDLAGSPMVGDSLRDLQ 134 (181)
T ss_pred CCCc----------------------------CCCCCHHH--------------HHHHHHHcCCChhhEEEEeCCHHHHH
Confidence 1111 23888888 99999999999999999999999999
Q ss_pred HHHHcCCcEEEECCCCCCCcccc-cc--cccchHHHHhhh
Q 017455 332 GAQRIGMPCVVMRSRCITTLPVS-KT--QRLADMLCRILK 368 (371)
Q Consensus 332 aA~~aGm~~v~v~~~~~~~~~l~-~~--~~~~~~l~~~l~ 368 (371)
+|+++||++|++.++........ .+ +.+++++.++++
T Consensus 135 ~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~ 174 (181)
T PRK08942 135 AAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQ 174 (181)
T ss_pred HHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHH
Confidence 99999999999988764322222 23 566666666554
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.5e-17 Score=143.26 Aligned_cols=108 Identities=14% Similarity=0.179 Sum_probs=81.0
Q ss_pred CCccHHHHHHHHHHCCCcEEEEcCCCCCC------------cHHHHHHHHHcCccccchheeecchhHHhhhhccccccc
Q 017455 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSG------------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGK 252 (371)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~IvTn~~~~~------------~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~ 252 (371)
++||+.++|+.|+++|++++|+||..+.. ...+...++.+|+...+.+ ... ....+
T Consensus 28 ~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~--~~~----------~~~~~ 95 (147)
T TIGR01656 28 LRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVL--FCP----------HHPAD 95 (147)
T ss_pred EcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEE--ECC----------CCCCC
Confidence 78999999999999999999999954100 1355667788888632111 000 00001
Q ss_pred cccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHH
Q 017455 253 GISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAG 332 (371)
Q Consensus 253 ~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~a 332 (371)
.. +..||+|++ |+.+++++|++|++||||||+..|+++
T Consensus 96 ~~----------------------------~~~KP~~~~--------------~~~~~~~~~~~~~e~i~IGDs~~Di~~ 133 (147)
T TIGR01656 96 NC----------------------------SCRKPKPGL--------------ILEALKRLGVDASRSLVVGDRLRDLQA 133 (147)
T ss_pred CC----------------------------CCCCCCHHH--------------HHHHHHHcCCChHHEEEEcCCHHHHHH
Confidence 11 123788888 999999999999999999999999999
Q ss_pred HHHcCCcEEEECCC
Q 017455 333 AQRIGMPCVVMRSR 346 (371)
Q Consensus 333 A~~aGm~~v~v~~~ 346 (371)
|+++||++|++.+|
T Consensus 134 A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 134 ARNAGLAAVLLVDG 147 (147)
T ss_pred HHHCCCCEEEecCC
Confidence 99999999999864
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.6e-16 Score=146.92 Aligned_cols=110 Identities=16% Similarity=0.130 Sum_probs=77.1
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhH
Q 017455 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (371)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~ 261 (371)
..+++||+.++|+.|+++|++++|+||+ ....+..+++++ +.. +. +++. +..+.|..+.
T Consensus 72 ~~~l~pG~~e~l~~l~~~g~~~~IvS~~---~~~~i~~il~~~-~~~--~~-i~~n--------~~~~~~~~~~------ 130 (219)
T PRK09552 72 TAEIREGFHEFVQFVKENNIPFYVVSGG---MDFFVYPLLQGL-IPK--EQ-IYCN--------GSDFSGEYIT------ 130 (219)
T ss_pred CCCcCcCHHHHHHHHHHcCCeEEEECCC---cHHHHHHHHHHh-CCc--Cc-EEEe--------EEEecCCeeE------
Confidence 3679999999999999999999999994 478899999987 643 11 1111 1112233222
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhhccCccccCC---CCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCC
Q 017455 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDT---SSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 338 (371)
Q Consensus 262 ~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~---p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm 338 (371)
..||+|.... -.... ...++++++.++.+||||||+.+|+.+|++||+
T Consensus 131 ----------------------~~kp~p~~~~~~~~~~~~-------K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~ 181 (219)
T PRK09552 131 ----------------------ITWPHPCDEHCQNHCGCC-------KPSLIRKLSDTNDFHIVIGDSITDLEAAKQADK 181 (219)
T ss_pred ----------------------EeccCCccccccccCCCc-------hHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCc
Confidence 2367765410 00000 245788899999999999999999999999999
Q ss_pred cEE
Q 017455 339 PCV 341 (371)
Q Consensus 339 ~~v 341 (371)
.++
T Consensus 182 ~~a 184 (219)
T PRK09552 182 VFA 184 (219)
T ss_pred cee
Confidence 444
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.3e-15 Score=142.70 Aligned_cols=109 Identities=8% Similarity=0.137 Sum_probs=80.3
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCC-CcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhH
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS-GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~-~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~ 261 (371)
..+.+++.++|+.++++|++++++||...+ .+..+..+++.+|+.++|+.+ ++++.. ...
T Consensus 113 s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i-~~~d~~--------------~~~---- 173 (237)
T TIGR01672 113 SIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVI-FAGDKP--------------GQY---- 173 (237)
T ss_pred CcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEE-ECCCCC--------------CCC----
Confidence 457888999999999999999999996421 456888888899999888653 333221 110
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 017455 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (371)
Q Consensus 262 ~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v 341 (371)
||+| . .+++++|+ +|||||+.+|+.+|+++||++|
T Consensus 174 ------------------------Kp~~----------------~-~~l~~~~i----~i~vGDs~~DI~aAk~AGi~~I 208 (237)
T TIGR01672 174 ------------------------QYTK----------------T-QWIQDKNI----RIHYGDSDNDITAAKEAGARGI 208 (237)
T ss_pred ------------------------CCCH----------------H-HHHHhCCC----eEEEeCCHHHHHHHHHCCCCEE
Confidence 2221 2 23566776 7999999999999999999999
Q ss_pred EECCCCCCCc-cccc
Q 017455 342 VMRSRCITTL-PVSK 355 (371)
Q Consensus 342 ~v~~~~~~~~-~l~~ 355 (371)
.+.+++.+.- +++.
T Consensus 209 ~V~~g~~s~~~~~~~ 223 (237)
T TIGR01672 209 RILRASNSTYKPLPQ 223 (237)
T ss_pred EEEecCCCCCCCccc
Confidence 9987765443 5554
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.8e-16 Score=140.59 Aligned_cols=129 Identities=14% Similarity=0.110 Sum_probs=92.3
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEcCCCCCC-----cHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCc
Q 017455 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSG-----DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 258 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~-----~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~ 258 (371)
.++|||.++|+.|+++|++++|+||+..-. .......++.+|++++|...... ++++.
T Consensus 28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~--------------~~~~~--- 90 (173)
T PRK06769 28 TLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKH--------------GDGCE--- 90 (173)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCC--------------CCCCC---
Confidence 489999999999999999999999953100 01133346677776654321111 11111
Q ss_pred hhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCC
Q 017455 259 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 338 (371)
Q Consensus 259 ~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm 338 (371)
..||+|++ |+.+++++|++|++|+||||+..|+.+|+++||
T Consensus 91 -------------------------~~KP~p~~--------------~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi 131 (173)
T PRK06769 91 -------------------------CRKPSTGM--------------LLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNA 131 (173)
T ss_pred -------------------------CCCCCHHH--------------HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCC
Confidence 23888888 999999999999999999999999999999999
Q ss_pred cEEEECCCCCCC------ccc--ccccccchHHHHhhh
Q 017455 339 PCVVMRSRCITT------LPV--SKTQRLADMLCRILK 368 (371)
Q Consensus 339 ~~v~v~~~~~~~------~~l--~~~~~~~~~l~~~l~ 368 (371)
++|++.++.... +.+ ..++.+++++.++++
T Consensus 132 ~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el~~ 169 (173)
T PRK06769 132 TTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDAVN 169 (173)
T ss_pred eEEEEecCCCchhhhhhhcccccCCCcchhhCHHHHHH
Confidence 999998876432 112 234556666666554
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.6e-15 Score=136.57 Aligned_cols=102 Identities=12% Similarity=0.101 Sum_probs=74.3
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHH
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~ 262 (371)
.+++||+.++|+.|+++ ++++|+|| +....++.+++++|+..+|...+...++. ++.|..
T Consensus 67 ~~~~pg~~e~L~~L~~~-~~~~IvS~---~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------~i~~~~--------- 126 (205)
T PRK13582 67 LDPLPGAVEFLDWLRER-FQVVILSD---TFYEFAGPLMRQLGWPTLFCHSLEVDEDG-------MITGYD--------- 126 (205)
T ss_pred CCCCCCHHHHHHHHHhc-CCEEEEeC---CcHHHHHHHHHHcCCchhhcceEEECCCC-------eEECcc---------
Confidence 66899999999999999 99999999 55889999999999988876543222111 111111
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 017455 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (371)
Q Consensus 263 ~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v 341 (371)
+|.| ++ ...+++.++..+++|+||||+.+|+.+++++|+.+.
T Consensus 127 -----------------------~~~p-------~~-------k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~ 168 (205)
T PRK13582 127 -----------------------LRQP-------DG-------KRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGIL 168 (205)
T ss_pred -----------------------cccc-------ch-------HHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEE
Confidence 1111 11 234455666677999999999999999999999664
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.64 E-value=9.5e-16 Score=137.21 Aligned_cols=137 Identities=10% Similarity=0.036 Sum_probs=91.6
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCC----C--------cHHHHHHHHHcCccccchheeecchhHHhhhhccccc
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS----G--------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 250 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~----~--------~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~ 250 (371)
..++||+.++|+.|+++|++++|+||+... . ......++..+++. |+.++.+.. + ..
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~-~--------~~ 93 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPH-H--------PE 93 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCC-C--------Cc
Confidence 348999999999999999999999996410 0 02233445555544 333222110 0 00
Q ss_pred cccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhH
Q 017455 251 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 330 (371)
Q Consensus 251 g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di 330 (371)
+.+.. .+..+..||+|++ |+.+++++|++|++||||||+..||
T Consensus 94 ~~~~~-----------------------~~~~~~~KP~p~~--------------~~~a~~~~~~~~~~~v~VGDs~~Di 136 (176)
T TIGR00213 94 GVEEF-----------------------RQVCDCRKPKPGM--------------LLQARKELHIDMAQSYMVGDKLEDM 136 (176)
T ss_pred ccccc-----------------------cCCCCCCCCCHHH--------------HHHHHHHcCcChhhEEEEcCCHHHH
Confidence 00000 0011235888888 9999999999999999999999999
Q ss_pred HHHHHcCCcE-EEECCCCCCCccc-ccccccchHHHHhh
Q 017455 331 AGAQRIGMPC-VVMRSRCITTLPV-SKTQRLADMLCRIL 367 (371)
Q Consensus 331 ~aA~~aGm~~-v~v~~~~~~~~~l-~~~~~~~~~l~~~l 367 (371)
++|+++|+++ +++.++....... ..++.+++++-+++
T Consensus 137 ~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el~ 175 (176)
T TIGR00213 137 QAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADLP 175 (176)
T ss_pred HHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHhh
Confidence 9999999998 7998876533333 23566777766654
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.62 E-value=2e-15 Score=134.31 Aligned_cols=99 Identities=13% Similarity=0.172 Sum_probs=77.4
Q ss_pred CCccHHHHHHHHHHCCCcEEEEcCCCCCC---------cHHHHHHHHHcCccccchheeecchhHHhhhhcccccccccc
Q 017455 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSG---------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 255 (371)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~IvTn~~~~~---------~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~ 255 (371)
++||+.++|+.|+++|++++|+||..... ...+..+++.+|+.. +.++.+. +..
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~ii~~~-~~~-------------- 105 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVLAATH-AGL-------------- 105 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEEEecC-CCC--------------
Confidence 68999999999999999999999954210 024677889999853 2222222 110
Q ss_pred CCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcC--CCCCcEEEEeCCH------
Q 017455 256 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE--KPVRNCFLIAGSQ------ 327 (371)
Q Consensus 256 ~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lg--v~p~e~I~IgDs~------ 327 (371)
..||+|++ |+.+++++| +++++|+||||+.
T Consensus 106 ----------------------------~~KP~p~~--------------~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~ 143 (166)
T TIGR01664 106 ----------------------------YRKPMTGM--------------WEYLQSQYNSPIKMTRSFYVGDAAGRKLDF 143 (166)
T ss_pred ----------------------------CCCCccHH--------------HHHHHHHcCCCCCchhcEEEECCCCCCCCC
Confidence 23788888 999999999 9999999999996
Q ss_pred --hhHHHHHHcCCcEEE
Q 017455 328 --SGVAGAQRIGMPCVV 342 (371)
Q Consensus 328 --~Di~aA~~aGm~~v~ 342 (371)
+|+++|+++|+++++
T Consensus 144 ~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 144 SDADIKFAKNLGLEFKY 160 (166)
T ss_pred chhHHHHHHHCCCCcCC
Confidence 699999999999875
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.5e-14 Score=132.13 Aligned_cols=114 Identities=19% Similarity=0.249 Sum_probs=91.1
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHH
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~ 262 (371)
.+++||+.++++.++++|++++|+|+ ++...++.+.+++|++..+...+...+ + .|+.-+.|.-+...
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSg---g~~~lv~~ia~~lg~d~~~an~l~~~d-G---~ltG~v~g~~~~~~----- 143 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISG---GFTFLVEPIAERLGIDYVVANELEIDD-G---KLTGRVVGPICDGE----- 143 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcC---ChHHHHHHHHHHhCCchheeeEEEEeC-C---EEeceeeeeecCcc-----
Confidence 67999999999999999999999999 679999999999999998877655443 2 34444444333210
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 263 ~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
.|. .+++..++.+|+++++++++|||.||+.+.+.+|.+.++
T Consensus 144 ----~K~----------------------------------~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~ 185 (212)
T COG0560 144 ----GKA----------------------------------KALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAV 185 (212)
T ss_pred ----hHH----------------------------------HHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEe
Confidence 011 127888999999999999999999999999999999998
Q ss_pred ECCC
Q 017455 343 MRSR 346 (371)
Q Consensus 343 v~~~ 346 (371)
-..+
T Consensus 186 n~~~ 189 (212)
T COG0560 186 NPKP 189 (212)
T ss_pred CcCH
Confidence 7643
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=99.58 E-value=6.4e-14 Score=127.14 Aligned_cols=114 Identities=18% Similarity=0.208 Sum_probs=83.6
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHH
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~ 262 (371)
..++||+.++|+.++++|++++|+|+ ++...++.+++.+|++++|...+...+++ ..+|+
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~---s~~~~v~~~~~~lg~~~~~~~~l~~~~~g-------~~~g~---------- 145 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSA---SLTILVKPLARILGIDNAIGTRLEESEDG-------IYTGN---------- 145 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeC---CcHHHHHHHHHHcCCcceEecceEEcCCC-------EEeCC----------
Confidence 35899999999999999999999999 55899999999999998776533221111 11221
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 263 ~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
+....+ ..+.+.. +++..+++.++++++|+++|||.+|+.+++.+|..++.
T Consensus 146 ------------------------~~~~~~--~g~~K~~---~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v 196 (202)
T TIGR01490 146 ------------------------IDGNNC--KGEGKVH---ALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVV 196 (202)
T ss_pred ------------------------ccCCCC--CChHHHH---HHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEe
Confidence 110000 0111111 27888899999999999999999999999999999887
Q ss_pred ECC
Q 017455 343 MRS 345 (371)
Q Consensus 343 v~~ 345 (371)
..+
T Consensus 197 ~~~ 199 (202)
T TIGR01490 197 NPD 199 (202)
T ss_pred CCC
Confidence 654
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=99.57 E-value=6.7e-15 Score=141.17 Aligned_cols=113 Identities=12% Similarity=0.014 Sum_probs=78.4
Q ss_pred CCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHHHH
Q 017455 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLAT 264 (371)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~ 264 (371)
-++|+.++++.|+++|+ ++|+||.... ......+...|+..+|+.+. ....++.+.
T Consensus 144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~--~~~~~~~~~~~~g~~~~~i~------------~~~g~~~~~--------- 199 (279)
T TIGR01452 144 SYAKLREACAHLREPGC-LFVATNRDPW--HPLSDGSRTPGTGSLVAAIE------------TASGRQPLV--------- 199 (279)
T ss_pred CHHHHHHHHHHHhcCCC-EEEEeCCCCC--CCCcCCCcccChHHHHHHHH------------HHhCCceec---------
Confidence 48899999999998887 7899995421 11011122234444443210 000111111
Q ss_pred HHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCcEEEE
Q 017455 265 EARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVM 343 (371)
Q Consensus 265 ~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~-~Di~aA~~aGm~~v~v 343 (371)
..||+|.+ |+.+++++|++|++|+||||+. .||.+|+++||++|+|
T Consensus 200 -------------------~gKP~p~~--------------~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V 246 (279)
T TIGR01452 200 -------------------VGKPSPYM--------------FECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLV 246 (279)
T ss_pred -------------------cCCCCHHH--------------HHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEEEE
Confidence 23788888 9999999999999999999995 8999999999999999
Q ss_pred CCCCCCCcccc
Q 017455 344 RSRCITTLPVS 354 (371)
Q Consensus 344 ~~~~~~~~~l~ 354 (371)
.+|....+++.
T Consensus 247 ~~G~~~~~~l~ 257 (279)
T TIGR01452 247 LSGVSRLEEAQ 257 (279)
T ss_pred CCCCCCHHHHH
Confidence 99987655554
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=99.56 E-value=7.2e-15 Score=130.13 Aligned_cols=107 Identities=9% Similarity=0.113 Sum_probs=86.4
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCC------------CcHHHHHHHHHcCccccchheeec----chhHHhhhhc
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS------------GDRIARSVVEKLGSERISKIKIVG----NEEVERSLYG 246 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~------------~~~~~~~~l~~lgl~~~f~~~i~~----~~~~~~~~f~ 246 (371)
.+++||+.++|+.|+++|++++|+||...- ....+..+++.+|+. |+.++++ .++.
T Consensus 28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~------ 99 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNC------ 99 (161)
T ss_pred eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCC------
Confidence 458999999999999999999999995210 234667788889986 6544443 1111
Q ss_pred cccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 017455 247 QFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS 326 (371)
Q Consensus 247 ~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs 326 (371)
+.+||+|++ |+.+++++|++|++|+||||+
T Consensus 100 ------------------------------------~~~KP~~~~--------------~~~~~~~~~~~~~e~l~IGD~ 129 (161)
T TIGR01261 100 ------------------------------------DCRKPKIKL--------------LEPYLKKNLIDKARSYVIGDR 129 (161)
T ss_pred ------------------------------------CCCCCCHHH--------------HHHHHHHcCCCHHHeEEEeCC
Confidence 134888888 999999999999999999999
Q ss_pred HhhHHHHHHcCCcEEEECCCC
Q 017455 327 QSGVAGAQRIGMPCVVMRSRC 347 (371)
Q Consensus 327 ~~Di~aA~~aGm~~v~v~~~~ 347 (371)
.+|+++|+++||+++++.++.
T Consensus 130 ~~Di~~A~~aGi~~i~~~~~~ 150 (161)
T TIGR01261 130 ETDMQLAENLGIRGIQYDEEE 150 (161)
T ss_pred HHHHHHHHHCCCeEEEEChhh
Confidence 999999999999999998653
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.56 E-value=4.2e-14 Score=126.22 Aligned_cols=115 Identities=17% Similarity=0.149 Sum_probs=75.2
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHH
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~ 262 (371)
.+++||+.++|+.|+++|++++|+||+ ....+..+++.+|+.++|+.+ ++++....+ ..+..+..-.+..
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~---~~~~~~~~l~~~~l~~~f~~i-~~~~~~~~~--~g~~~~~~~~~~~---- 140 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDG---NDFFIDPVLEGIGEKDVFIEI-YSNPASFDN--DGRHIVWPHHCHG---- 140 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCC---cHHHHHHHHHHcCChhheeEE-eccCceECC--CCcEEEecCCCCc----
Confidence 579999999999999999999999994 478889999999999999874 444332110 0011110000000
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcE
Q 017455 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (371)
Q Consensus 263 ~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~ 340 (371)
-...|....++++ ++...+.. ++++|||||+.+|+.+|+++++-+
T Consensus 141 ---------------------------~~~~~~g~~K~~~---~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~~ 185 (188)
T TIGR01489 141 ---------------------------CCSCPCGCCKGKV---IHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVVF 185 (188)
T ss_pred ---------------------------cCcCCCCCCHHHH---HHHHHhhc---CceEEEECCCcchhchHhcCCccc
Confidence 0000001112333 55555544 899999999999999999986543
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.8e-14 Score=117.99 Aligned_cols=117 Identities=21% Similarity=0.197 Sum_probs=85.8
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHH
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~ 262 (371)
..++||+.++|+.|+++|++++++||+ ....+...++.+|+..+++.++................ +
T Consensus 23 ~~~~~~~~~~l~~l~~~g~~i~ivS~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~------~----- 88 (139)
T cd01427 23 LELYPGVKEALKELKEKGIKLALATNK---SRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFL------G----- 88 (139)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCc---hHHHHHHHHHHcCCchhhhheeccchhhhhcccccccc------c-----
Confidence 558999999999999999999999994 47889999999999877776543322211100000000 0
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 263 ~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
.......||.+.. +..++++++..++++++|||+.+|+.+|+++|+++++
T Consensus 89 ----------------~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 89 ----------------GGPFDIGKPNPDK--------------LLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred ----------------ccccccCCCCHHH--------------HHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 0011122555555 8999999999999999999999999999999999987
Q ss_pred E
Q 017455 343 M 343 (371)
Q Consensus 343 v 343 (371)
+
T Consensus 139 v 139 (139)
T cd01427 139 V 139 (139)
T ss_pred C
Confidence 5
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.55 E-value=9.7e-14 Score=127.40 Aligned_cols=107 Identities=11% Similarity=0.040 Sum_probs=76.2
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHH
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~ 262 (371)
++++||+.++|+.++++| +++|+|+ +....+..+++.+|++++|...+...+. ..++|..+..
T Consensus 67 i~l~pga~ell~~lk~~~-~~~IVS~---~~~~~~~~il~~lgi~~~~an~l~~~~~-------g~~tG~~~~~------ 129 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERF-QVVILSD---TFYEFSQPLMRQLGFPTLLCHKLEIDDS-------DRVVGYQLRQ------ 129 (203)
T ss_pred CCCCccHHHHHHHHHhCC-eEEEEeC---ChHHHHHHHHHHcCCchhhceeeEEecC-------CeeECeeecC------
Confidence 569999999999999975 9999999 5689999999999999887643332110 1223322211
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 263 ~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
||.+.- +...++..|. +|++|||+.||+.+++.+|+.+++
T Consensus 130 -----------------------~~~K~~--------------~l~~l~~~~~---~~v~vGDs~nDl~ml~~Ag~~ia~ 169 (203)
T TIGR02137 130 -----------------------KDPKRQ--------------SVIAFKSLYY---RVIAAGDSYNDTTMLSEAHAGILF 169 (203)
T ss_pred -----------------------cchHHH--------------HHHHHHhhCC---CEEEEeCCHHHHHHHHhCCCCEEe
Confidence 111111 2223345553 899999999999999999999999
Q ss_pred ECCC
Q 017455 343 MRSR 346 (371)
Q Consensus 343 v~~~ 346 (371)
...+
T Consensus 170 ~ak~ 173 (203)
T TIGR02137 170 HAPE 173 (203)
T ss_pred cCCH
Confidence 8754
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=99.54 E-value=8.9e-15 Score=130.98 Aligned_cols=108 Identities=12% Similarity=0.016 Sum_probs=87.7
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcc---------ccchheeecchhHHhhhhccccccc
Q 017455 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE---------RISKIKIVGNEEVERSLYGQFVLGK 252 (371)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~---------~~f~~~i~~~~~~~~~~f~~~v~g~ 252 (371)
...++||+.++|+.|+++|++++|+||+. ....++.+++.+|+. ++|+.++.+. +..
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~--~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~-~~~----------- 108 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWND--VPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIY-KPN----------- 108 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCCC--ChHHHHHHHHhCCcCCCCCcccHHHhceeeeecc-CCc-----------
Confidence 46699999999999999999999999941 467888899999998 8887754332 110
Q ss_pred cccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHc--CCCCCcEEEEeCCHhhH
Q 017455 253 GISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA--EKPVRNCFLIAGSQSGV 330 (371)
Q Consensus 253 ~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~l--gv~p~e~I~IgDs~~Di 330 (371)
..||.+.+ ++.+.+.+ |++|++|+||||+..|+
T Consensus 109 -------------------------------~~kp~~~i--------------~~~~~~~~~~gl~p~e~l~VgDs~~di 143 (174)
T TIGR01685 109 -------------------------------KAKQLEMI--------------LQKVNKVDPSVLKPAQILFFDDRTDNV 143 (174)
T ss_pred -------------------------------hHHHHHHH--------------HHHhhhcccCCCCHHHeEEEcChhHhH
Confidence 11555555 77777777 89999999999999999
Q ss_pred HHHHHcCCcEEEECCCCC
Q 017455 331 AGAQRIGMPCVVMRSRCI 348 (371)
Q Consensus 331 ~aA~~aGm~~v~v~~~~~ 348 (371)
.+|+++|+++|++.++..
T Consensus 144 ~aA~~aGi~~i~v~~g~~ 161 (174)
T TIGR01685 144 REVWGYGVTSCYCPSGMD 161 (174)
T ss_pred HHHHHhCCEEEEcCCCcc
Confidence 999999999999988754
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.1e-14 Score=138.26 Aligned_cols=127 Identities=14% Similarity=0.062 Sum_probs=88.0
Q ss_pred CCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHHHH
Q 017455 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLAT 264 (371)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~ 264 (371)
.++++.+.+..|++.+++++++||.. ..........+|+..+|+.+.. ... ++.+.
T Consensus 121 ~y~~l~~a~~~L~~~~~~~~iatn~~---~~~~~~~~~~~g~g~~~~~i~~-~~~-----------~~~~~--------- 176 (257)
T TIGR01458 121 SYQILNQAFRLLLDGAKPLLIAIGKG---RYYKRKDGLALDVGPFVTALEY-ATD-----------TKATV--------- 176 (257)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEeCCC---CCCcCCCCCCCCchHHHHHHHH-HhC-----------CCcee---------
Confidence 47889999999999999999999954 2323333445566666654210 000 00001
Q ss_pred HHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCcEEEE
Q 017455 265 EARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVM 343 (371)
Q Consensus 265 ~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~-~Di~aA~~aGm~~v~v 343 (371)
..||+|++ |+.+++++|++|++|+||||+. +||.+|+++||++|+|
T Consensus 177 -------------------~gKP~p~~--------------~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v 223 (257)
T TIGR01458 177 -------------------VGKPSKTF--------------FLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQV 223 (257)
T ss_pred -------------------ecCCCHHH--------------HHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEE
Confidence 13788887 9999999999999999999996 8999999999999999
Q ss_pred CCCCCCCccc----ccccccchHHHHhhh
Q 017455 344 RSRCITTLPV----SKTQRLADMLCRILK 368 (371)
Q Consensus 344 ~~~~~~~~~l----~~~~~~~~~l~~~l~ 368 (371)
.+|.....+. ..++.+++++.++++
T Consensus 224 ~~G~~~~~~~~~~~~~pd~~~~sl~el~~ 252 (257)
T TIGR01458 224 RTGKYRPSDEEKINVPPDLTCDSLPHAVD 252 (257)
T ss_pred CCCCCChHHhcccCCCCCEEECCHHHHHH
Confidence 9885332211 234566666666554
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=99.53 E-value=8.3e-14 Score=123.38 Aligned_cols=107 Identities=17% Similarity=0.260 Sum_probs=76.3
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhH
Q 017455 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (371)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~ 261 (371)
..+++||+.++++.++++|++++|+|+ +....++.+++.+|+.+++...+...+++ .++|....
T Consensus 71 ~~~~~~g~~~~l~~l~~~g~~~~ivS~---~~~~~i~~~~~~~g~~~~~~~~~~~~~~g-------~~~g~~~~------ 134 (177)
T TIGR01488 71 QVALRPGARELISWLKERGIDTVIVSG---GFDFFVEPVAEKLGIDDVFANRLEFDDNG-------LLTGPIEG------ 134 (177)
T ss_pred cCCcCcCHHHHHHHHHHCCCEEEEECC---CcHHHHHHHHHHcCCchheeeeEEECCCC-------EEeCccCC------
Confidence 466899999999999999999999999 45889999999999988766544322111 11121000
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHc
Q 017455 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI 336 (371)
Q Consensus 262 ~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~a 336 (371)
||. |....++.+ ++..++.+|++++++++|||+.+|+.+++.+
T Consensus 135 ------------------------~~~-----~~~~~K~~~---l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 135 ------------------------QVN-----PEGECKGKV---LKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred ------------------------ccc-----CCcchHHHH---HHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 000 111222233 6777888899999999999999999999864
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.1e-13 Score=127.49 Aligned_cols=114 Identities=18% Similarity=0.145 Sum_probs=75.9
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhH
Q 017455 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (371)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~ 261 (371)
..+++||+.++|+.|+++|++++|+|+ +....+..+++.++....+ ++++ ..+.+..+.
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~---~~~~~i~~il~~~~~~~~i----~~n~--------~~~~~~~~~------ 126 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISG---GMDFFVYPLLEGIVEKDRI----YCNE--------ADFSNEYIH------ 126 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECC---CcHHHHHHHHHhhCCcccE----Eece--------eEeeCCeeE------
Confidence 367999999999999999999999999 4578888889887543322 1110 011111111
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhhccCccccCCC-CCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcE
Q 017455 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTS-SPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (371)
Q Consensus 262 ~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p-~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~ 340 (371)
..||+|..+.. .....- -..+++.++..++++|||||+.+|+.+|+.||+
T Consensus 127 ----------------------~~~p~~~~~~~~~~cg~~-----K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~-- 177 (214)
T TIGR03333 127 ----------------------IDWPHPCDGTCQNQCGCC-----KPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDL-- 177 (214)
T ss_pred ----------------------EeCCCCCccccccCCCCC-----HHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCe--
Confidence 22666655210 000000 135567777789999999999999999999999
Q ss_pred EEECC
Q 017455 341 VVMRS 345 (371)
Q Consensus 341 v~v~~ 345 (371)
++.++
T Consensus 178 ~~ar~ 182 (214)
T TIGR03333 178 CFARD 182 (214)
T ss_pred eEehH
Confidence 55544
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.3e-14 Score=119.56 Aligned_cols=100 Identities=15% Similarity=0.178 Sum_probs=80.4
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEcCCCCCC-----cHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCc
Q 017455 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSG-----DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 258 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~-----~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~ 258 (371)
.++||+.++|+.|+++|++++|+||+.... ...+...++++|+...+. +++. .
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~--~~~~--~------------------ 82 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVL--YACP--H------------------ 82 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEE--EECC--C------------------
Confidence 389999999999999999999999943111 456778889998863322 1111 0
Q ss_pred hhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHc-CCCCCcEEEEeC-CHhhHHHHHHc
Q 017455 259 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA-EKPVRNCFLIAG-SQSGVAGAQRI 336 (371)
Q Consensus 259 ~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~l-gv~p~e~I~IgD-s~~Di~aA~~a 336 (371)
..||+|++ |+.+++++ +++|++|+|||| +..|+.+|+++
T Consensus 83 -------------------------~~KP~~~~--------------~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~ 123 (132)
T TIGR01662 83 -------------------------CRKPKPGM--------------FLEALKRFNEIDPEESVYVGDQDLTDLQAAKRA 123 (132)
T ss_pred -------------------------CCCCChHH--------------HHHHHHHcCCCChhheEEEcCCCcccHHHHHHC
Confidence 12788888 99999999 599999999999 79999999999
Q ss_pred CCcEEEEC
Q 017455 337 GMPCVVMR 344 (371)
Q Consensus 337 Gm~~v~v~ 344 (371)
|+++|+++
T Consensus 124 Gi~~i~~~ 131 (132)
T TIGR01662 124 GLAFILVA 131 (132)
T ss_pred CCeEEEee
Confidence 99999985
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=99.50 E-value=9.8e-14 Score=123.78 Aligned_cols=105 Identities=13% Similarity=0.196 Sum_probs=85.0
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhH
Q 017455 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (371)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~ 261 (371)
...++||+.++|+.|+++|++++|+||... ...+..+++.+|+..++.
T Consensus 41 ~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~--~~~~~~~~~~~gl~~~~~------------------------------ 88 (170)
T TIGR01668 41 HNEAYPALRDWIEELKAAGRKLLIVSNNAG--EQRAKAVEKALGIPVLPH------------------------------ 88 (170)
T ss_pred CCCcChhHHHHHHHHHHcCCEEEEEeCCch--HHHHHHHHHHcCCEEEcC------------------------------
Confidence 356899999999999999999999999431 355556666666543210
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCcE
Q 017455 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPC 340 (371)
Q Consensus 262 ~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~-~Di~aA~~aGm~~ 340 (371)
..||+|++ |+.+++++|+++++|+||||+. .|+.+|+++||++
T Consensus 89 ----------------------~~KP~p~~--------------~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~ 132 (170)
T TIGR01668 89 ----------------------AVKPPGCA--------------FRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYT 132 (170)
T ss_pred ----------------------CCCCChHH--------------HHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeE
Confidence 12788888 9999999999999999999998 6999999999999
Q ss_pred EEECCCCCCCcccc
Q 017455 341 VVMRSRCITTLPVS 354 (371)
Q Consensus 341 v~v~~~~~~~~~l~ 354 (371)
|++.++......+.
T Consensus 133 i~v~~g~~~~~~~~ 146 (170)
T TIGR01668 133 ILVEPLVHPDQWFI 146 (170)
T ss_pred EEEccCcCCccccc
Confidence 99998876655443
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.1e-12 Score=120.87 Aligned_cols=192 Identities=13% Similarity=0.040 Sum_probs=114.6
Q ss_pred CceEEEEecCCccccccccCcHHHHHHHH-HHcCCCCCCCChHHHHHHHHhhcCCh-HH-HH--HH-HHH-HcCCCCCCC
Q 017455 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAF-QKLGLDCANWTAPIYTDLLRKSAGDE-DR-ML--VL-FFN-RIGWPTSVP 155 (371)
Q Consensus 83 ~~kaviFD~DGTL~d~~~~~~~~a~~~~~-~~~g~~~~~~~~~~~~~~~~~~~g~~-~~-~~--~~-~~~-~~g~~~~~~ 155 (371)
..|++|||+||||++.. ....|...+ +++|+.. .+.+....+++...... .. .. .. ++. ..|.+
T Consensus 5 ~~k~~iFD~DGTL~~~d---~~~~~~~~~~~~~g~~~--~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~g~~---- 75 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQD---MFGSFLRYLLRRQPLNL--LLVLPLLPVIGLGLLVKGRAARWPMSLLLWGCTFGHS---- 75 (211)
T ss_pred cceEEEEecCCCCcccc---hHHHHHHHHHHhcchhh--HHHhHHHHHhccCcccchhhhhhhHHHHHHHHHcCCC----
Confidence 46799999999999444 457777777 7888652 33233333332211100 00 00 00 011 11221
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHH-HHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchhee
Q 017455 156 TNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFV-DDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKI 234 (371)
Q Consensus 156 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL-~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i 234 (371)
.+.++.+.+.+.+.|.+. ..++||+.++| +.++++|++++|+|| +++..+..+++.+|+... +.+|
T Consensus 76 ----~~~~~~~~~~f~~~~~~~-----~~~~pga~e~L~~~l~~~G~~l~IvSa---s~~~~~~~il~~l~~~~~-~~~i 142 (211)
T PRK11590 76 ----EARLQALEADFVRWFRDN-----VTAFPVVQERLTTYLLSSDADVWLITG---SPQPLVEQVYFDTPWLPR-VNLI 142 (211)
T ss_pred ----HHHHHHHHHHHHHHHHHh-----CcCCccHHHHHHHHHHhCCCEEEEEeC---CcHHHHHHHHHHcccccc-CceE
Confidence 122334444444444332 45799999999 578889999999999 558999999999996321 1122
Q ss_pred ecchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcC
Q 017455 235 VGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE 314 (371)
Q Consensus 235 ~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lg 314 (371)
-+.-++ .|+..+.|... .|. . | ...+.+.+|
T Consensus 143 ~t~l~~---~~tg~~~g~~c-~g~-------------------------------------~----K----~~~l~~~~~ 173 (211)
T PRK11590 143 ASQMQR---RYGGWVLTLRC-LGH-------------------------------------E----K----VAQLERKIG 173 (211)
T ss_pred EEEEEE---EEccEECCccC-CCh-------------------------------------H----H----HHHHHHHhC
Confidence 222122 23333333221 110 0 1 344455567
Q ss_pred CCCCcEEEEeCCHhhHHHHHHcCCcEEEECC
Q 017455 315 KPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (371)
Q Consensus 315 v~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~ 345 (371)
.+.+.+.+.|||.+|+.+...+|-+.++.++
T Consensus 174 ~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~ 204 (211)
T PRK11590 174 TPLRLYSGYSDSKQDNPLLYFCQHRWRVTPR 204 (211)
T ss_pred CCcceEEEecCCcccHHHHHhCCCCEEECcc
Confidence 7788899999999999999999999888654
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.3e-13 Score=125.08 Aligned_cols=88 Identities=19% Similarity=0.312 Sum_probs=75.4
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccc--cchheeecchhHHhhhhccccccccccCCchh
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER--ISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~--~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~ 260 (371)
.+++||+.++|+.|+++|++++++|+ .....+..+.+.+|+.+ .|.... +
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TG---D~~~~a~~~~~~lgi~~~~v~a~~~----------------------~--- 177 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTG---DNESTASAIAKQLGIFDSIVFARVI----------------------G--- 177 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEES---SEHHHHHHHHHHTTSCSEEEEESHE----------------------T---
T ss_pred CcchhhhhhhhhhhhccCcceeeeec---ccccccccccccccccccccccccc----------------------c---
Confidence 46899999999999999999999998 55888999999999955 221100 1
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcC
Q 017455 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG 337 (371)
Q Consensus 261 ~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aG 337 (371)
||++.+ |..+++.+++++.+|+||||+.||+.|+++||
T Consensus 178 -------------------------kP~~k~--------------~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 178 -------------------------KPEPKI--------------FLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp -------------------------TTHHHH--------------HHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred -------------------------cccchh--------------HHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 676666 89999999999999999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=8.7e-13 Score=124.71 Aligned_cols=61 Identities=10% Similarity=0.173 Sum_probs=51.1
Q ss_pred HHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCcEEEECCCCCCCccccc----ccccchHHHHh
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCITTLPVSK----TQRLADMLCRI 366 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~-~Di~aA~~aGm~~v~v~~~~~~~~~l~~----~~~~~~~l~~~ 366 (371)
|+.+++++++++++|+||||+. +||.+|+++||++++|.+|....+.+.. ++.+++++.++
T Consensus 180 ~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el 245 (248)
T PRK10444 180 IRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADI 245 (248)
T ss_pred HHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHh
Confidence 9999999999999999999997 7999999999999999999877666543 44555555443
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.5e-12 Score=122.17 Aligned_cols=107 Identities=8% Similarity=0.180 Sum_probs=77.8
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCC-CcHHHHHHHHHcCc--cccchheeecchhHHhhhhccccccccccCCch
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS-GDRIARSVVEKLGS--ERISKIKIVGNEEVERSLYGQFVLGKGISSGVD 259 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~-~~~~~~~~l~~lgl--~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~ 259 (371)
..|+||+.++|+.|+++|++++++||.+.+ .+..+..+++.+|+ .++|..+ +++ +.. .
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vi-l~g--------------d~~--~-- 173 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVI-FAG--------------DKP--G-- 173 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEE-EcC--------------CCC--C--
Confidence 568999999999999999999999996422 24566677777999 8887653 222 111 0
Q ss_pred hHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCc
Q 017455 260 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 339 (371)
Q Consensus 260 ~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~ 339 (371)
||++ ..+++.+|+ +|||||+.+|+.+|++||+.
T Consensus 174 --------------------------K~~K-----------------~~~l~~~~i----~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 174 --------------------------QYTK-----------------TQWLKKKNI----RIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred --------------------------CCCH-----------------HHHHHhcCC----eEEEcCCHHHHHHHHHcCCc
Confidence 2211 113456676 89999999999999999999
Q ss_pred EEEECCCCCCC-ccccc
Q 017455 340 CVVMRSRCITT-LPVSK 355 (371)
Q Consensus 340 ~v~v~~~~~~~-~~l~~ 355 (371)
+|.+.++.... .+++.
T Consensus 207 ~I~v~~G~~~~~~~~~~ 223 (237)
T PRK11009 207 GIRILRAANSTYKPLPQ 223 (237)
T ss_pred EEEEecCCCCCCCcccc
Confidence 99998887643 34543
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.1e-12 Score=123.88 Aligned_cols=49 Identities=6% Similarity=0.182 Sum_probs=44.3
Q ss_pred HHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCcEEEECCCCCCCcccc
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCITTLPVS 354 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~-~Di~aA~~aGm~~v~v~~~~~~~~~l~ 354 (371)
|+.+++++|+++++++||||+. +||.+|+++||++|+|.+|.....++.
T Consensus 184 ~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~ 233 (249)
T TIGR01457 184 MEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVA 233 (249)
T ss_pred HHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHh
Confidence 9999999999999999999997 799999999999999999876555443
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.2e-11 Score=110.34 Aligned_cols=205 Identities=12% Similarity=0.193 Sum_probs=128.4
Q ss_pred CceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHHH
Q 017455 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (371)
Q Consensus 83 ~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~ 162 (371)
..++|.||||.|++--+.+ .+..+-.|.. ++.....+..++++..+.+.+..++.
T Consensus 15 ~~~aVcFDvDSTvi~eEgI------delA~~~G~~------~~Va~~T~rAMng~~~F~eaL~~Rl~------------- 69 (227)
T KOG1615|consen 15 SADAVCFDVDSTVIQEEGI------DELAAYCGVG------EAVAEVTRRAMNGEADFQEALAARLS------------- 69 (227)
T ss_pred hcCeEEEecCcchhHHhhH------HHHHHHhCch------HHHHHHHHHHhCCCCcHHHHHHHHHH-------------
Confidence 3579999999999877765 5555556664 45566666666667766666665553
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccc--cchheeecchhH
Q 017455 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER--ISKIKIVGNEEV 240 (371)
Q Consensus 163 ~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~--~f~~~i~~~~~~ 240 (371)
+++-.......++......+-||+++|+..|+++|.+++++|+ ++...+..+...||+.. .+...+.-+..+
T Consensus 70 ---llqp~~~qv~~~v~~~k~~lT~Gi~eLv~~L~~~~~~v~liSG---GF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~G 143 (227)
T KOG1615|consen 70 ---LLQPLQVQVEQFVIKQKPTLTPGIRELVSRLHARGTQVYLISG---GFRQLIEPVAEQLGIPKSNIYANELLFDKDG 143 (227)
T ss_pred ---HhcccHHHHHHHHhcCCCccCCCHHHHHHHHHHcCCeEEEEcC---ChHHHHHHHHHHhCCcHhhhhhheeeeccCC
Confidence 2232333333444445678999999999999999999999999 77999999999999976 555544433222
Q ss_pred HhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcE
Q 017455 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (371)
Q Consensus 241 ~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~ 320 (371)
+|..+-+-..+..+. . +.++ +....+ |.....+
T Consensus 144 ---k~~gfd~~~ptsdsg--------g-------------------------------Ka~~---i~~lrk--~~~~~~~ 176 (227)
T KOG1615|consen 144 ---KYLGFDTNEPTSDSG--------G-------------------------------KAEV---IALLRK--NYNYKTI 176 (227)
T ss_pred ---cccccccCCccccCC--------c-------------------------------cHHH---HHHHHh--CCChhee
Confidence 222221112221110 1 1122 444444 8889999
Q ss_pred EEEeCCHhhHHHHHHcCCcEEEECCCCCCCcccccccccchHHHHhhhhc
Q 017455 321 FLIAGSQSGVAGAQRIGMPCVVMRSRCITTLPVSKTQRLADMLCRILKSI 370 (371)
Q Consensus 321 I~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l~~~~~~~~~l~~~l~~i 370 (371)
+||||+.+|++|..- |..++..+.- .-.+....-+.+++..+..|
T Consensus 177 ~mvGDGatDlea~~p-a~afi~~~g~----~~r~~vk~nak~~~~~f~~L 221 (227)
T KOG1615|consen 177 VMVGDGATDLEAMPP-ADAFIGFGGN----VIREGVKANAKWYVTDFYVL 221 (227)
T ss_pred EEecCCccccccCCc-hhhhhccCCc----eEcHhhHhccHHHHHHHHHH
Confidence 999999999988665 4434333211 11111222456666666544
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.1e-12 Score=125.89 Aligned_cols=63 Identities=8% Similarity=0.012 Sum_probs=52.3
Q ss_pred HHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCcEEEECCCCCCCcccc------cccccchHHHHhhh
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCITTLPVS------KTQRLADMLCRILK 368 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~-~Di~aA~~aGm~~v~v~~~~~~~~~l~------~~~~~~~~l~~~l~ 368 (371)
|+.+++++|+++++++||||+. +||.+|+++||++|+|.+|.....++. .++.+++++.++++
T Consensus 236 ~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~ 305 (311)
T PLN02645 236 MDYLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLT 305 (311)
T ss_pred HHHHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHH
Confidence 9999999999999999999997 899999999999999998876655442 34566666666554
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.2e-12 Score=123.31 Aligned_cols=113 Identities=13% Similarity=0.055 Sum_probs=89.7
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccc-cchheeecchhHHhhhhccccccccccCCchh
Q 017455 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (371)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~-~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~ 260 (371)
...++||+.++|+.|+++|++++++||. +.......++.+++.. +|+.+ ++.+.... |
T Consensus 185 ~~~~~~~~~~~l~~l~~~g~~i~i~T~r---~~~~~~~~l~~l~~~~~~f~~i-~~~~~~~~--~--------------- 243 (300)
T PHA02530 185 EDKPNPMVVELVKMYKAAGYEIIVVSGR---DGVCEEDTVEWLRQTDIWFDDL-IGRPPDMH--F--------------- 243 (300)
T ss_pred cCCCChhHHHHHHHHHhCCCEEEEEeCC---ChhhHHHHHHHHHHcCCchhhh-hCCcchhh--h---------------
Confidence 4568999999999999999999999994 4788889999999986 88764 33321110 0
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCC-CCCcEEEEeCCHhhHHHHHHcCCc
Q 017455 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK-PVRNCFLIAGSQSGVAGAQRIGMP 339 (371)
Q Consensus 261 ~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv-~p~e~I~IgDs~~Di~aA~~aGm~ 339 (371)
.-..+..||+|++ ++.++++++. ++++|++|||+.+|+.+|+++||+
T Consensus 244 ------------------~~~~~~~kp~p~~--------------~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~ 291 (300)
T PHA02530 244 ------------------QREQGDKRPDDVV--------------KEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLE 291 (300)
T ss_pred ------------------cccCCCCCCcHHH--------------HHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCe
Confidence 0000123778777 9999999998 689999999999999999999999
Q ss_pred EEEECCCC
Q 017455 340 CVVMRSRC 347 (371)
Q Consensus 340 ~v~v~~~~ 347 (371)
+|+|.+|.
T Consensus 292 ~i~v~~g~ 299 (300)
T PHA02530 292 CWQVAPGD 299 (300)
T ss_pred EEEecCCC
Confidence 99998763
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=1e-11 Score=122.69 Aligned_cols=108 Identities=15% Similarity=0.176 Sum_probs=81.2
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCC----CC--------CcHHHHHHHHHcCccccchheeecchhHHhhhhccccc
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYG----KS--------GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 250 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~----~~--------~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~ 250 (371)
.+++||+.++|+.|+++|++++|+||.+ .. ....+..+++.+|+. |+.++++... .
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd~i~i~~~~----------~ 96 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FDEVLICPHF----------P 96 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--eeeEEEeCCc----------C
Confidence 5699999999999999999999999941 00 123455567777773 4443332100 0
Q ss_pred cccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhH
Q 017455 251 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 330 (371)
Q Consensus 251 g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di 330 (371)
.+.. ..+||+|++ ++.+++.++++|++++||||+.+|+
T Consensus 97 sd~~----------------------------~~rKP~p~~--------------l~~a~~~l~v~~~~svmIGDs~sDi 134 (354)
T PRK05446 97 EDNC----------------------------SCRKPKTGL--------------VEEYLAEGAIDLANSYVIGDRETDV 134 (354)
T ss_pred cccC----------------------------CCCCCCHHH--------------HHHHHHHcCCCcccEEEEcCCHHHH
Confidence 0111 134788888 9999999999999999999999999
Q ss_pred HHHHHcCCcEEEEC
Q 017455 331 AGAQRIGMPCVVMR 344 (371)
Q Consensus 331 ~aA~~aGm~~v~v~ 344 (371)
.+|+++||++|+++
T Consensus 135 ~aAk~aGi~~I~v~ 148 (354)
T PRK05446 135 QLAENMGIKGIRYA 148 (354)
T ss_pred HHHHHCCCeEEEEE
Confidence 99999999999994
|
|
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.6e-12 Score=98.29 Aligned_cols=68 Identities=15% Similarity=0.221 Sum_probs=57.7
Q ss_pred hccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCC-HhhHHHHHHcCCcEEEECCCCCCCcccc----cccc
Q 017455 284 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRSRCITTLPVS----KTQR 358 (371)
Q Consensus 284 ~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs-~~Di~aA~~aGm~~v~v~~~~~~~~~l~----~~~~ 358 (371)
+.||+|.+ |+.+++++++++++|+||||+ ..||.+|+++||.+|+|.+|......+. .+++
T Consensus 2 ~gKP~p~~--------------~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~ 67 (75)
T PF13242_consen 2 CGKPSPGM--------------LEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDY 67 (75)
T ss_dssp CSTTSHHH--------------HHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSE
T ss_pred CCCCcHHH--------------HHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCE
Confidence 35899998 999999999999999999999 8899999999999999999988776654 4455
Q ss_pred cchHHHH
Q 017455 359 LADMLCR 365 (371)
Q Consensus 359 ~~~~l~~ 365 (371)
+++++.|
T Consensus 68 vv~~l~e 74 (75)
T PF13242_consen 68 VVDDLKE 74 (75)
T ss_dssp EESSGGG
T ss_pred EECCHHh
Confidence 5555543
|
... |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=99.22 E-value=1e-11 Score=108.27 Aligned_cols=97 Identities=21% Similarity=0.165 Sum_probs=76.9
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccc-cchheeecchhHHhhhhccccccccccCCchhH
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~-~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~ 261 (371)
+.++||+.++|+.|+ ++++++|+|++ ....+..+++.+++.. +|+. |++.+++.. +
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~---~~~~~~~il~~l~~~~~~f~~-i~~~~d~~~--------------~---- 100 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAG---LRMYADPVLDLLDPKKYFGYR-RLFRDECVF--------------V---- 100 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCC---cHHHHHHHHHHhCcCCCEeee-EEECccccc--------------c----
Confidence 568999999999998 57999999995 4788999999999965 4455 344333321 1
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 017455 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (371)
Q Consensus 262 ~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v 341 (371)
||+ |.++++++|++|++||+|||+..|+.+|.++|+.+-
T Consensus 101 ------------------------KP~-----------------~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 101 ------------------------KGK-----------------YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred ------------------------CCe-----------------EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 443 366789999999999999999999999999998764
Q ss_pred EE
Q 017455 342 VM 343 (371)
Q Consensus 342 ~v 343 (371)
-.
T Consensus 140 ~f 141 (148)
T smart00577 140 PW 141 (148)
T ss_pred Cc
Confidence 43
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.21 E-value=4.1e-10 Score=115.75 Aligned_cols=98 Identities=18% Similarity=0.176 Sum_probs=72.2
Q ss_pred CCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchh
Q 017455 181 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (371)
Q Consensus 181 ~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~ 260 (371)
...+++||+.++|++++++|++++|+|+ +++..++.+++++|+ |+.+ ++.+++..
T Consensus 69 ~~lp~~pga~e~L~~lk~~G~~v~LaTa---s~~~~a~~i~~~lGl---Fd~V-igsd~~~~------------------ 123 (479)
T PRK08238 69 ATLPYNEEVLDYLRAERAAGRKLVLATA---SDERLAQAVAAHLGL---FDGV-FASDGTTN------------------ 123 (479)
T ss_pred hhCCCChhHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHHHcCC---CCEE-EeCCCccc------------------
Confidence 3467899999999999999999999999 458899999999987 5553 33322211
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcE
Q 017455 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (371)
Q Consensus 261 ~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~ 340 (371)
+||+++ .+...+.++ .++++++||+.+|+.+++.+| +.
T Consensus 124 -------------------------------~kg~~K--------~~~l~~~l~--~~~~~yvGDS~~Dlp~~~~A~-~a 161 (479)
T PRK08238 124 -------------------------------LKGAAK--------AAALVEAFG--ERGFDYAGNSAADLPVWAAAR-RA 161 (479)
T ss_pred -------------------------------cCCchH--------HHHHHHHhC--ccCeeEecCCHHHHHHHHhCC-Ce
Confidence 122222 233446665 366899999999999999999 66
Q ss_pred EEECC
Q 017455 341 VVMRS 345 (371)
Q Consensus 341 v~v~~ 345 (371)
+.|+.
T Consensus 162 v~Vn~ 166 (479)
T PRK08238 162 IVVGA 166 (479)
T ss_pred EEECC
Confidence 66653
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.21 E-value=2.1e-10 Score=109.18 Aligned_cols=177 Identities=16% Similarity=0.211 Sum_probs=109.8
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHH-cCccccchheeecchhHHh---hhh---cccccc-----
Q 017455 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKIKIVGNEEVER---SLY---GQFVLG----- 251 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~-lgl~~~f~~~i~~~~~~~~---~~f---~~~v~g----- 251 (371)
.+.||+.++|+.|+++|++++++||+++.........+.. ++++-..+.++.|+.-... ... ..++.|
T Consensus 24 ~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~~at~~~l~~~~~~~kv~viG~~~l~ 103 (269)
T COG0647 24 EAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSGDATADYLAKQKPGKKVYVIGEEGLK 103 (269)
T ss_pred ccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHHHHHHHHHHhhCCCCEEEEECCcchH
Confidence 3899999999999999999999999886555645555555 6664434433322221110 000 001111
Q ss_pred --------------cc-----ccCCchhHHHHHH----HHHHhHHHHH---------------------H--HHHHHhhc
Q 017455 252 --------------KG-----ISSGVDEQLATEA----RKAVSAQKQE---------------------I--AEEVASML 285 (371)
Q Consensus 252 --------------~~-----v~~~~~~~~~~~~----~k~~~~~~~~---------------------~--~~~~~~~~ 285 (371)
+. +..|.+....-|. .+++.+-..+ | +-+.++..
T Consensus 104 ~~l~~~G~~~~~~~~~~~~d~Vv~g~d~~~~~e~l~~a~~~i~~g~~fI~tNpD~~~p~~~g~~pgaGai~~~~~~~tg~ 183 (269)
T COG0647 104 EELEGAGFELVDEEEPARVDAVVVGLDRTLTYEKLAEALLAIAAGAPFIATNPDLTVPTERGLRPGAGAIAALLEQATGR 183 (269)
T ss_pred HHHHhCCcEEeccCCCCcccEEEEecCCCCCHHHHHHHHHHHHcCCcEEEeCCCccccCCCCCccCcHHHHHHHHHhhCC
Confidence 11 2222222222222 2221111111 2 23455566
Q ss_pred cCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCcEEEECCCCCCCcccccccccchHHH
Q 017455 286 KLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCITTLPVSKTQRLADMLC 364 (371)
Q Consensus 286 KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~-~Di~aA~~aGm~~v~v~~~~~~~~~l~~~~~~~~~l~ 364 (371)
+| ..+.||++.- |+.+++.++.++++++||||+. +||.+|+++||.+++|.+|....+.+.......+.+.
T Consensus 184 ~~-~~~GKP~~~i-------~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~~~~p~~v~ 255 (269)
T COG0647 184 EP-TVIGKPSPAI-------YEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAEVKPTYVV 255 (269)
T ss_pred cc-cccCCCCHHH-------HHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhhccCCcchH
Confidence 66 6777777773 9999999999999999999997 5999999999999999999886666554444444444
Q ss_pred Hhhh
Q 017455 365 RILK 368 (371)
Q Consensus 365 ~~l~ 368 (371)
+++.
T Consensus 256 ~sl~ 259 (269)
T COG0647 256 DSLA 259 (269)
T ss_pred hhHH
Confidence 4443
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=99.21 E-value=2.6e-10 Score=108.99 Aligned_cols=118 Identities=23% Similarity=0.279 Sum_probs=82.9
Q ss_pred HHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhcccccccc
Q 017455 174 LDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKG 253 (371)
Q Consensus 174 ~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~ 253 (371)
+.+.+....++++||+.+|++.|+++|++++|+|+ +....++.+++++|+.+.+.. ++++.-. +..++
T Consensus 111 i~~~v~~~~l~l~pG~~efl~~L~~~GIpv~IvS~---G~~~~Ie~vL~~lgl~~~~~~-IvSN~L~--------f~~dG 178 (277)
T TIGR01544 111 IKEIVAESDVMLKDGYENFFDKLQQHSIPVFIFSA---GIGNVLEEVLRQAGVYHPNVK-VVSNFMD--------FDEDG 178 (277)
T ss_pred HHHHHhhcCCccCcCHHHHHHHHHHCCCcEEEEeC---CcHHHHHHHHHHcCCCCcCce-EEeeeEE--------ECCCC
Confidence 34444334688999999999999999999999999 558999999999998765533 4333211 12233
Q ss_pred ccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcC--CCCCcEEEEeCCHhhHH
Q 017455 254 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE--KPVRNCFLIAGSQSGVA 331 (371)
Q Consensus 254 v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lg--v~p~e~I~IgDs~~Di~ 331 (371)
+..| ||.|-+-. ..+... +++.++++++ .++++||+|||+.+|+.
T Consensus 179 vltG----------------------------~~~P~i~~---~~K~~~--v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ 225 (277)
T TIGR01544 179 VLKG----------------------------FKGPLIHT---FNKNHD--VALRNTEYFNQLKDRSNIILLGDSQGDLR 225 (277)
T ss_pred eEeC----------------------------CCCCcccc---cccHHH--HHHHHHHHhCccCCcceEEEECcChhhhh
Confidence 4433 44443311 011111 2677899999 89999999999999999
Q ss_pred HHHHc
Q 017455 332 GAQRI 336 (371)
Q Consensus 332 aA~~a 336 (371)
||..+
T Consensus 226 ma~g~ 230 (277)
T TIGR01544 226 MADGV 230 (277)
T ss_pred HhcCC
Confidence 98766
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=99.20 E-value=8.2e-11 Score=115.17 Aligned_cols=90 Identities=12% Similarity=0.100 Sum_probs=77.0
Q ss_pred CCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHH----cCccccchheeecchhHHhhhhccccccccccCCchh
Q 017455 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK----LGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (371)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~----lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~ 260 (371)
++||+.++|..|+++|++++|+|+ +....+..++++ +++.++|+.+..+
T Consensus 32 ~~~~~~e~L~~L~~~Gi~lai~S~---n~~~~a~~~l~~~~~~~~~~~~f~~~~~~------------------------ 84 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQGFLLALASK---NDEDDAKKVFERRKDFILQAEDFDARSIN------------------------ 84 (320)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEcC---CCHHHHHHHHHhCccccCcHHHeeEEEEe------------------------
Confidence 588999999999999999999999 457888889998 8888888764221
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCc
Q 017455 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 339 (371)
Q Consensus 261 ~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~ 339 (371)
.||.|+. ++.+++++|+.++++|||||+..|+.++++++-.
T Consensus 85 ------------------------~~pk~~~--------------i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 85 ------------------------WGPKSES--------------LRKIAKKLNLGTDSFLFIDDNPAERANVKITLPV 125 (320)
T ss_pred ------------------------cCchHHH--------------HHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCC
Confidence 1556665 9999999999999999999999999999997654
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.18 E-value=6.7e-11 Score=103.47 Aligned_cols=95 Identities=18% Similarity=0.310 Sum_probs=82.1
Q ss_pred CCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchh
Q 017455 181 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (371)
Q Consensus 181 ~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~ 260 (371)
+....-|.+++.+.+++.+|+++.|+||. .+.-+....+++|+.-+...
T Consensus 43 d~~~~tpe~~~W~~e~k~~gi~v~vvSNn---~e~RV~~~~~~l~v~fi~~A---------------------------- 91 (175)
T COG2179 43 DNPDATPELRAWLAELKEAGIKVVVVSNN---KESRVARAAEKLGVPFIYRA---------------------------- 91 (175)
T ss_pred cCCCCCHHHHHHHHHHHhcCCEEEEEeCC---CHHHHHhhhhhcCCceeecc----------------------------
Confidence 34568899999999999999999999994 47888888999988754321
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCc
Q 017455 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMP 339 (371)
Q Consensus 261 ~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~-~Di~aA~~aGm~ 339 (371)
.||.+.- |..|++.++++|++|+||||.. .||.+++.+||+
T Consensus 92 ------------------------~KP~~~~--------------fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~ 133 (175)
T COG2179 92 ------------------------KKPFGRA--------------FRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMR 133 (175)
T ss_pred ------------------------cCccHHH--------------HHHHHHHcCCChhHEEEEcchhhhhhhcccccCcE
Confidence 2666666 9999999999999999999996 699999999999
Q ss_pred EEEEC
Q 017455 340 CVVMR 344 (371)
Q Consensus 340 ~v~v~ 344 (371)
||+|.
T Consensus 134 tIlV~ 138 (175)
T COG2179 134 TILVE 138 (175)
T ss_pred EEEEE
Confidence 99996
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=99.16 E-value=6.1e-11 Score=100.91 Aligned_cols=89 Identities=8% Similarity=-0.002 Sum_probs=71.2
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcC-------ccccchheeecchhHHhhhhccccccccccC
Q 017455 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLG-------SERISKIKIVGNEEVERSLYGQFVLGKGISS 256 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lg-------l~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~ 256 (371)
+++||+.++|+.|+++|++++|+||++ ....+...++.++ +.++|+.++.+ +
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~--~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~---------------~---- 87 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYND--DPHVAYELLKIFEDFGIIFPLAEYFDPLTIG---------------Y---- 87 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCC--CHHHHHHHHHhccccccchhhHhhhhhhhhc---------------C----
Confidence 378999999999999999999999952 4677778888888 56666653221 1
Q ss_pred CchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcC--CCCCcEEEEeCCHhhHHHHH
Q 017455 257 GVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE--KPVRNCFLIAGSQSGVAGAQ 334 (371)
Q Consensus 257 ~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lg--v~p~e~I~IgDs~~Di~aA~ 334 (371)
.||+|++ |..+++++| +.|++|+||||+..|+...+
T Consensus 88 ----------------------------~~pkp~~--------------~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~ 125 (128)
T TIGR01681 88 ----------------------------WLPKSPR--------------LVEIALKLNGVLKPKSILFVDDRPDNNEEVD 125 (128)
T ss_pred ----------------------------CCcHHHH--------------HHHHHHHhcCCCCcceEEEECCCHhHHHHHH
Confidence 1455555 999999999 99999999999999988765
Q ss_pred H
Q 017455 335 R 335 (371)
Q Consensus 335 ~ 335 (371)
+
T Consensus 126 ~ 126 (128)
T TIGR01681 126 Y 126 (128)
T ss_pred h
Confidence 4
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.14 E-value=9.9e-11 Score=104.47 Aligned_cols=83 Identities=16% Similarity=0.101 Sum_probs=73.5
Q ss_pred HHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHHHHHHHHHHhH
Q 017455 193 VDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSA 272 (371)
Q Consensus 193 L~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~ 272 (371)
|..|+++|++++|+||. ....++..++.+|+.++|+..
T Consensus 43 ~~~L~~~Gi~laIiT~k---~~~~~~~~l~~lgi~~~f~~~--------------------------------------- 80 (169)
T TIGR02726 43 VIVLQLCGIDVAIITSK---KSGAVRHRAEELKIKRFHEGI--------------------------------------- 80 (169)
T ss_pred HHHHHHCCCEEEEEECC---CcHHHHHHHHHCCCcEEEecC---------------------------------------
Confidence 66788899999999994 488999999999999887531
Q ss_pred HHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEC
Q 017455 273 QKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 344 (371)
Q Consensus 273 ~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~ 344 (371)
||.|+. |+.+++++|+++++|++|||+.+|+.+++.+|+..++-+
T Consensus 81 -------------kpkp~~--------------~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~n 125 (169)
T TIGR02726 81 -------------KKKTEP--------------YAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGD 125 (169)
T ss_pred -------------CCCHHH--------------HHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcC
Confidence 566666 999999999999999999999999999999999988865
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.6e-10 Score=101.42 Aligned_cols=86 Identities=13% Similarity=0.133 Sum_probs=72.7
Q ss_pred HHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHHHHHHHHHHh
Q 017455 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (371)
Q Consensus 192 lL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~ 271 (371)
+|+.|+++|++++|+||. +...+...++.+|+.++|+..
T Consensus 36 ~i~~Lk~~G~~i~IvTn~---~~~~~~~~l~~~gi~~~~~~~-------------------------------------- 74 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGR---KAKLVEDRCKTLGITHLYQGQ-------------------------------------- 74 (154)
T ss_pred HHHHHHHCCCEEEEEECC---CCHHHHHHHHHcCCCEEEecc--------------------------------------
Confidence 689999999999999994 467888999999999876431
Q ss_pred HHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEECCCC
Q 017455 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSRC 347 (371)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~~ 347 (371)
||.|+. ++.+++++|+++++|+||||+.+|+.+++.+|+. +.+.+..
T Consensus 75 --------------~~k~~~--------------~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~-~~v~~~~ 121 (154)
T TIGR01670 75 --------------SNKLIA--------------FSDILEKLALAPENVAYIGDDLIDWPVMEKVGLS-VAVADAH 121 (154)
T ss_pred --------------cchHHH--------------HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCe-EecCCcC
Confidence 344444 8999999999999999999999999999999997 6665543
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.2e-09 Score=99.11 Aligned_cols=111 Identities=14% Similarity=0.014 Sum_probs=72.7
Q ss_pred CCCCccHHHHHH-HHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhH
Q 017455 183 APLRPGVEDFVD-DAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (371)
Q Consensus 183 ~~~~pgv~elL~-~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~ 261 (371)
..++||+.++|+ .++++|++++|+|| +++..++.+.+.+++....+ +|-+.-++. .+..+.|... .|
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSa---s~~~~~~~ia~~~~~~~~~~-~i~t~le~~---~gg~~~g~~c-~g---- 160 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITG---SPQPLVEAVYFDSNFIHRLN-LIASQIERG---NGGWVLPLRC-LG---- 160 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcC---CcHHHHHHHHHhccccccCc-EEEEEeEEe---CCceEcCccC-CC----
Confidence 358999999996 78889999999999 55888999988866533222 122221211 1112222111 11
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 017455 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (371)
Q Consensus 262 ~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v 341 (371)
..| ...+.+.+|.+.+.+.+.|||.+|+.+...+|-+.+
T Consensus 161 -------------------------------------~~K----v~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~ 199 (210)
T TIGR01545 161 -------------------------------------HEK----VAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWR 199 (210)
T ss_pred -------------------------------------hHH----HHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEE
Confidence 011 233344556677788999999999999999999988
Q ss_pred EECCC
Q 017455 342 VMRSR 346 (371)
Q Consensus 342 ~v~~~ 346 (371)
+-+++
T Consensus 200 Vnp~~ 204 (210)
T TIGR01545 200 VSKRG 204 (210)
T ss_pred ECcch
Confidence 86543
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.5e-09 Score=106.39 Aligned_cols=73 Identities=11% Similarity=0.201 Sum_probs=54.7
Q ss_pred cCCCCCchhHHHHHHHHHHHHHc--------CC-----CCCcEEEEeCCH-hhHHHHHHcCCcEEEECCCCCCCccc---
Q 017455 291 IDTSSPESLDKIVAALRAGAEYA--------EK-----PVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCITTLPV--- 353 (371)
Q Consensus 291 i~~p~~~~~~~~~~~~~~a~~~l--------gv-----~p~e~I~IgDs~-~Di~aA~~aGm~~v~v~~~~~~~~~l--- 353 (371)
+.||++.. |+.+++.+ ++ ++++++||||+. +||.+|+++||.+|+|.+|.....+.
T Consensus 231 ~GKP~~~~-------~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~ 303 (321)
T TIGR01456 231 LGKPTKLT-------YDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKE 303 (321)
T ss_pred cCCCChHH-------HHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCC
Confidence 45665553 88888777 43 457999999998 79999999999999999884443332
Q ss_pred ccccccchHHHHhhhhc
Q 017455 354 SKTQRLADMLCRILKSI 370 (371)
Q Consensus 354 ~~~~~~~~~l~~~l~~i 370 (371)
..++.+++++.|.++.|
T Consensus 304 ~~p~~vv~~l~e~~~~i 320 (321)
T TIGR01456 304 CKPTLIVNDVFDAVTKI 320 (321)
T ss_pred CCCCEEECCHHHHHHHh
Confidence 13467888888887765
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.07 E-value=3.8e-10 Score=116.78 Aligned_cols=95 Identities=16% Similarity=0.212 Sum_probs=72.7
Q ss_pred CCccHHHHHHHHHHCCCcEEEEcCCCCC---------CcHHHHHHHHHcCccccchheeecchhHHhhhhcccccccccc
Q 017455 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKS---------GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 255 (371)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~IvTn~~~~---------~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~ 255 (371)
++|||.+.|+.|+++|++++|+||...- ....+..+++.+|+. |+.+ ++.+..
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdvi-ia~~~~--------------- 259 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVF-IAIGAG--------------- 259 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEE-EeCCCC---------------
Confidence 6899999999999999999999995420 013467788888874 5542 222111
Q ss_pred CCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcC----CCCCcEEEEeCCHhhHH
Q 017455 256 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE----KPVRNCFLIAGSQSGVA 331 (371)
Q Consensus 256 ~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lg----v~p~e~I~IgDs~~Di~ 331 (371)
..+||+|.+ ++.++++++ +++++++||||+..|++
T Consensus 260 ---------------------------~~RKP~pGm--------------~~~a~~~~~~~~~Id~~~S~~VGDaagr~~ 298 (526)
T TIGR01663 260 ---------------------------FYRKPLTGM--------------WDHLKEEANDGTEIQEDDCFFVGDAAGRPA 298 (526)
T ss_pred ---------------------------CCCCCCHHH--------------HHHHHHhcCcccCCCHHHeEEeCCcccchH
Confidence 135899988 999999985 89999999999999988
Q ss_pred HHHHcCC
Q 017455 332 GAQRIGM 338 (371)
Q Consensus 332 aA~~aGm 338 (371)
+|+++|-
T Consensus 299 ~g~~ag~ 305 (526)
T TIGR01663 299 NGKAAGK 305 (526)
T ss_pred HHHhcCC
Confidence 8777765
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=7.8e-10 Score=104.77 Aligned_cols=37 Identities=11% Similarity=0.130 Sum_probs=34.1
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
++.+++++|++++++++|||+.||++|++.+|+.+++
T Consensus 204 l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vam 240 (272)
T PRK10530 204 LTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAM 240 (272)
T ss_pred HHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEe
Confidence 8999999999999999999999999999999985443
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=99.05 E-value=4.1e-09 Score=98.61 Aligned_cols=135 Identities=16% Similarity=0.197 Sum_probs=85.3
Q ss_pred CCCCCccHHHHHHHH--HHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCch
Q 017455 182 DAPLRPGVEDFVDDA--YNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVD 259 (371)
Q Consensus 182 ~~~~~pgv~elL~~L--~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~ 259 (371)
.+++.||+.++++.+ ++.|+.++|+|+ +...++..+++..|+.+.|.. |+++.-.... =+.+.. ..... +.
T Consensus 69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSD---aNs~fI~~iL~~~gl~~~f~~-I~TNpa~~~~-~G~l~v-~pyh~-h~ 141 (234)
T PF06888_consen 69 SIPIDPGMKELLRFLAKNQRGFDLIIISD---ANSFFIETILEHHGLRDCFSE-IFTNPACFDA-DGRLRV-RPYHS-HG 141 (234)
T ss_pred cCCCCccHHHHHHHHHhcCCCceEEEEeC---CcHhHHHHHHHhCCCccccce-EEeCCceecC-CceEEE-eCccC-CC
Confidence 488999999999999 457999999999 458999999999999998876 3444211100 000000 00000 00
Q ss_pred hHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCC-
Q 017455 260 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM- 338 (371)
Q Consensus 260 ~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm- 338 (371)
+. +=.+-+| +-+++..|..-...-|+..+++|||||+.+|+=.+.+++-
T Consensus 142 C~------------------------~C~~NmC------K~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~ 191 (234)
T PF06888_consen 142 CS------------------------LCPPNMC------KGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPR 191 (234)
T ss_pred CC------------------------cCCCccc------hHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCC
Confidence 00 0011122 2233222333333458889999999999999999998876
Q ss_pred cEEEECCCCCCCccc
Q 017455 339 PCVVMRSRCITTLPV 353 (371)
Q Consensus 339 ~~v~v~~~~~~~~~l 353 (371)
..|+.+.++.-...+
T Consensus 192 D~v~~R~~~~l~~~i 206 (234)
T PF06888_consen 192 DVVFPRKGYPLHKLI 206 (234)
T ss_pred CEEecCCCChHHHHH
Confidence 477777776544333
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=99.05 E-value=4.4e-10 Score=100.13 Aligned_cols=104 Identities=14% Similarity=0.257 Sum_probs=70.3
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcc----------ccchheeecchhHHhhhhcccccc
Q 017455 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE----------RISKIKIVGNEEVERSLYGQFVLG 251 (371)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~----------~~f~~~i~~~~~~~~~~f~~~v~g 251 (371)
.+.++|+|.+.|..|+.+|+++++.|-++ ....++..|+.|++. ++|+.. .|..|
T Consensus 43 ~v~lypdv~~iL~~L~~~gv~lavASRt~--~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~-------------eI~~g 107 (169)
T PF12689_consen 43 EVSLYPDVPEILQELKERGVKLAVASRTD--EPDWARELLKLLEIDDADGDGVPLIEYFDYL-------------EIYPG 107 (169)
T ss_dssp EE---TTHHHHHHHHHHCT--EEEEE--S---HHHHHHHHHHTT-C----------CCECEE-------------EESSS
T ss_pred EEEeCcCHHHHHHHHHHCCCEEEEEECCC--ChHHHHHHHHhcCCCccccccccchhhcchh-------------heecC
Confidence 46699999999999999999999999643 368999999999999 555432 11111
Q ss_pred ccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHH
Q 017455 252 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVA 331 (371)
Q Consensus 252 ~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~ 331 (371)
. | .. =|+.+.+..|++.++.+||+|-.+++.
T Consensus 108 s-----K-----------------------------------------~~---Hf~~i~~~tgI~y~eMlFFDDe~~N~~ 138 (169)
T PF12689_consen 108 S-----K-----------------------------------------TT---HFRRIHRKTGIPYEEMLFFDDESRNIE 138 (169)
T ss_dssp ------H-----------------------------------------HH---HHHHHHHHH---GGGEEEEES-HHHHH
T ss_pred c-----h-----------------------------------------HH---HHHHHHHhcCCChhHEEEecCchhcce
Confidence 1 0 01 188889999999999999999999999
Q ss_pred HHHHcCCcEEEECCCCCC
Q 017455 332 GAQRIGMPCVVMRSRCIT 349 (371)
Q Consensus 332 aA~~aGm~~v~v~~~~~~ 349 (371)
...+.|..+|.+++|-+.
T Consensus 139 ~v~~lGV~~v~v~~Glt~ 156 (169)
T PF12689_consen 139 VVSKLGVTCVLVPDGLTW 156 (169)
T ss_dssp HHHTTT-EEEE-SSS--H
T ss_pred eeEecCcEEEEeCCCCCH
Confidence 999999999999987543
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.7e-09 Score=100.05 Aligned_cols=41 Identities=12% Similarity=0.271 Sum_probs=38.5
Q ss_pred HHHHHHHcCCCCCcE-EEEeCCH-hhHHHHHHcCCcEEEECCC
Q 017455 306 LRAGAEYAEKPVRNC-FLIAGSQ-SGVAGAQRIGMPCVVMRSR 346 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~-I~IgDs~-~Di~aA~~aGm~~v~v~~~ 346 (371)
|+.++++++++++++ +||||+. +||.+|+++||++|+|.+|
T Consensus 194 ~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 194 YRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred HHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 999999999999987 9999998 7999999999999999764
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=2e-09 Score=97.14 Aligned_cols=84 Identities=10% Similarity=0.104 Sum_probs=68.2
Q ss_pred HHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHHHHHHHHHHh
Q 017455 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (371)
Q Consensus 192 lL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~ 271 (371)
.|+.|+++|++++|+||. ....+..+++.+|+..+|.. .
T Consensus 56 ~i~~L~~~Gi~v~I~T~~---~~~~v~~~l~~lgl~~~f~g----~---------------------------------- 94 (183)
T PRK09484 56 GIRCLLTSGIEVAIITGR---KSKLVEDRMTTLGITHLYQG----Q---------------------------------- 94 (183)
T ss_pred HHHHHHHCCCEEEEEeCC---CcHHHHHHHHHcCCceeecC----C----------------------------------
Confidence 456777899999999994 47888999999999877642 0
Q ss_pred HHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEECC
Q 017455 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (371)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~ 345 (371)
++.++. ++.+++++|+++++|+||||+.+|+.+|+++|+.++ +.+
T Consensus 95 --------------~~k~~~--------------l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~-v~~ 139 (183)
T PRK09484 95 --------------SNKLIA--------------FSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVA-VAD 139 (183)
T ss_pred --------------CcHHHH--------------HHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEe-cCC
Confidence 111222 899999999999999999999999999999999954 543
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=98.93 E-value=1e-09 Score=103.04 Aligned_cols=101 Identities=15% Similarity=0.195 Sum_probs=72.7
Q ss_pred CccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHHHHH
Q 017455 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATE 265 (371)
Q Consensus 186 ~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~ 265 (371)
+|++.++++.+.++|+++ |+||.. .......+..+|...+|..+ .. ..++.+.
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d---~~~~~~~~~~~~~g~~~~~i------------~~-~g~~~~~---------- 192 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPD---RGINQHGIYRYGAGYYAELI------------KQ-LGGKVIY---------- 192 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCC---EeccCCCceEecccHHHHHH------------HH-hCCcEec----------
Confidence 789999999998899997 889954 33333344455555444321 00 1122211
Q ss_pred HHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCC-CCcEEEEeCC-HhhHHHHHHcCCcEEEE
Q 017455 266 ARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP-VRNCFLIAGS-QSGVAGAQRIGMPCVVM 343 (371)
Q Consensus 266 ~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~-p~e~I~IgDs-~~Di~aA~~aGm~~v~v 343 (371)
..||+|.+ |+.+++++|+. +++|+||||+ .+||.+|+++||++++|
T Consensus 193 ------------------~gKP~~~~--------------~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v 240 (242)
T TIGR01459 193 ------------------SGKPYPAI--------------FHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDTALV 240 (242)
T ss_pred ------------------CCCCCHHH--------------HHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeEEEE
Confidence 23777777 99999999975 6799999999 59999999999999998
Q ss_pred CC
Q 017455 344 RS 345 (371)
Q Consensus 344 ~~ 345 (371)
.+
T Consensus 241 ~t 242 (242)
T TIGR01459 241 LT 242 (242)
T ss_pred eC
Confidence 63
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=98.82 E-value=3.8e-08 Score=93.93 Aligned_cols=49 Identities=14% Similarity=0.274 Sum_probs=39.4
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccc
Q 017455 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (371)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f 230 (371)
..++.||+.++|+.|+++|++++++||........+...+.++|+...+
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~ 164 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQAD 164 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCC
Confidence 4668999999999999999999999997643345556778888887543
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=2e-08 Score=91.71 Aligned_cols=52 Identities=8% Similarity=-0.022 Sum_probs=46.4
Q ss_pred hhccCccccCCCCCchhHHHHHHH--HHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEECCC
Q 017455 283 SMLKLSVDIDTSSPESLDKIVAAL--RAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 346 (371)
Q Consensus 283 ~~~KP~p~i~~p~~~~~~~~~~~~--~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~ 346 (371)
++.||+|.+ | .| +.+++++|++|++|+||+|...|+++|+++||+++.+.++
T Consensus 154 gl~KPdp~i---------K---~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~ 207 (219)
T PTZ00445 154 GLDAPMPLD---------K---SYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTGN 207 (219)
T ss_pred cccCCCccc---------h---HHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCCh
Confidence 466888888 1 16 9999999999999999999999999999999999999865
|
|
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=98.80 E-value=3.2e-08 Score=97.46 Aligned_cols=125 Identities=14% Similarity=0.148 Sum_probs=85.6
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHc-C-------ccccchheeecchhHHhhhhcc------c
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL-G-------SERISKIKIVGNEEVERSLYGQ------F 248 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~l-g-------l~~~f~~~i~~~~~~~~~~f~~------~ 248 (371)
+.+.||+.++|+.|+++|++++|+|| +....+..+++.+ | +.++|+.+|.+..-= .+|.. +
T Consensus 183 v~~~pgl~elL~~Lr~~G~klfLvTN---S~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP--~FF~~~~pf~~v 257 (343)
T TIGR02244 183 VLRDPKLPLFLSKLKEHGKKLFLLTN---SDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKP--GFFTEGRPFRQV 257 (343)
T ss_pred hccchhHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCC--cccCCCCceEEE
Confidence 55799999999999999999999999 5588999999996 7 899999876654311 12221 1
Q ss_pred cccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCH-
Q 017455 249 VLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ- 327 (371)
Q Consensus 249 v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~- 327 (371)
.+.++..+... +.+ .+|- .+|. .-. +....+.+|+.+++++||||+.
T Consensus 258 ~~~~g~~~~~~---------------------~~~-l~~g-~vY~-gGn--------~~~~~~~l~~~~~~vlYvGD~i~ 305 (343)
T TIGR02244 258 DVETGSLKWGE---------------------VDG-LEPG-KVYS-GGS--------LKQFHELLKWRGKEVLYFGDHIY 305 (343)
T ss_pred eCCCCcccCCc---------------------ccc-ccCC-CeEe-CCC--------HHHHHHHHCCCCCcEEEECCcch
Confidence 11111100000 000 0110 1111 011 5777899999999999999997
Q ss_pred hhHHHHH-HcCCcEEEEC
Q 017455 328 SGVAGAQ-RIGMPCVVMR 344 (371)
Q Consensus 328 ~Di~aA~-~aGm~~v~v~ 344 (371)
.||.+++ .+||.+|+|-
T Consensus 306 ~Di~~~kk~~Gw~TvlI~ 323 (343)
T TIGR02244 306 GDLLRSKKKRGWRTAAII 323 (343)
T ss_pred HHHHhhHHhcCcEEEEEc
Confidence 5999998 9999999986
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >COG4229 Predicted enolase-phosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.4e-07 Score=82.26 Aligned_cols=107 Identities=12% Similarity=0.169 Sum_probs=72.6
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhH
Q 017455 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (371)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~ 261 (371)
..+++|++.+.|++.+++|++++|.|.++ -.....++ |-.+.-|. .+.|..+. ++..|+
T Consensus 101 kahlypDav~~ik~wk~~g~~vyiYSSGS---V~AQkL~F---ghs~agdL---------~~lfsGyf---DttiG~--- 159 (229)
T COG4229 101 KAHLYPDAVQAIKRWKALGMRVYIYSSGS---VKAQKLFF---GHSDAGDL---------NSLFSGYF---DTTIGK--- 159 (229)
T ss_pred ccccCHhHHHHHHHHHHcCCcEEEEcCCC---chhHHHhh---cccccccH---------Hhhhccee---eccccc---
Confidence 46799999999999999999999999864 33222222 21111110 11121111 112221
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 017455 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (371)
Q Consensus 262 ~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v 341 (371)
|-.-.- |..++...|++|.+++|+.|.+..+.||+.+||.++
T Consensus 160 ------------------------KrE~~S--------------Y~kIa~~iGl~p~eilFLSDn~~EL~AA~~vGl~t~ 201 (229)
T COG4229 160 ------------------------KRESQS--------------YAKIAGDIGLPPAEILFLSDNPEELKAAAGVGLATG 201 (229)
T ss_pred ------------------------cccchh--------------HHHHHHhcCCCchheEEecCCHHHHHHHHhcchhee
Confidence 111111 899999999999999999999999999999999999
Q ss_pred EECCCC
Q 017455 342 VMRSRC 347 (371)
Q Consensus 342 ~v~~~~ 347 (371)
++..+.
T Consensus 202 l~~R~g 207 (229)
T COG4229 202 LAVRPG 207 (229)
T ss_pred eeecCC
Confidence 986543
|
|
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.79 E-value=8.2e-08 Score=91.55 Aligned_cols=83 Identities=10% Similarity=0.038 Sum_probs=62.3
Q ss_pred HHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHh-hHHHHHHcCCcEEEECCCCCCCcccccc-
Q 017455 279 EEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQS-GVAGAQRIGMPCVVMRSRCITTLPVSKT- 356 (371)
Q Consensus 279 ~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~-Di~aA~~aGm~~v~v~~~~~~~~~l~~~- 356 (371)
.+.++.++| --+.||++.- ++...++++++|++|+||||+.+ ||.-+++.|+++++|-+|.+..++....
T Consensus 211 v~~~t~R~P-~v~GKP~~~m-------~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~ 282 (306)
T KOG2882|consen 211 VKFATGRQP-IVLGKPSTFM-------FEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQ 282 (306)
T ss_pred HHHHhcCCC-eecCCCCHHH-------HHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcc
Confidence 344556666 4455665552 89999999999999999999986 9999999999999999998866655433
Q ss_pred ---cccchHHHHhhhh
Q 017455 357 ---QRLADMLCRILKS 369 (371)
Q Consensus 357 ---~~~~~~l~~~l~~ 369 (371)
..++|.+.+.+..
T Consensus 283 ~~~~~~PDyy~~~l~d 298 (306)
T KOG2882|consen 283 GDNKMVPDYYADSLGD 298 (306)
T ss_pred cccCCCCchHHhhHHH
Confidence 2346666665543
|
|
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.77 E-value=3.5e-08 Score=88.65 Aligned_cols=110 Identities=13% Similarity=0.118 Sum_probs=77.9
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEcCCCCC---------Cc---HHHHHHHHHcCccccchheeecchhHHhhhhcccccc
Q 017455 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKS---------GD---RIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLG 251 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~IvTn~~~~---------~~---~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g 251 (371)
.+.||+.+.+..|++.|++++++||-+.- +. ..+...++..|. .|+.+.+ +...
T Consensus 31 ~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv--~id~i~~-Cph~----------- 96 (181)
T COG0241 31 QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGV--KIDGILY-CPHH----------- 96 (181)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCC--ccceEEE-CCCC-----------
Confidence 37899999999999999999999993310 00 223334444443 1222111 1000
Q ss_pred ccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHH
Q 017455 252 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVA 331 (371)
Q Consensus 252 ~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~ 331 (371)
.. +.-.++||.|.+ ++.+++++++++++.++|||...|++
T Consensus 97 p~--------------------------~~c~cRKP~~gm--------------~~~~~~~~~iD~~~s~~VGD~~~Dlq 136 (181)
T COG0241 97 PE--------------------------DNCDCRKPKPGM--------------LLSALKEYNIDLSRSYVVGDRLTDLQ 136 (181)
T ss_pred CC--------------------------CCCcccCCChHH--------------HHHHHHHhCCCccceEEecCcHHHHH
Confidence 00 001267999999 99999999999999999999999999
Q ss_pred HHHHcCCcEEEECCCC
Q 017455 332 GAQRIGMPCVVMRSRC 347 (371)
Q Consensus 332 aA~~aGm~~v~v~~~~ 347 (371)
+|.++|++.+.+.++.
T Consensus 137 ~a~n~gi~~~~~~~~~ 152 (181)
T COG0241 137 AAENAGIKGVLVLTGI 152 (181)
T ss_pred HHHHCCCCceEEEcCc
Confidence 9999999988876553
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.74 E-value=2.3e-08 Score=89.35 Aligned_cols=40 Identities=23% Similarity=0.536 Sum_probs=36.0
Q ss_pred ccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcccc
Q 017455 187 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229 (371)
Q Consensus 187 pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~ 229 (371)
|++.++|+.++++|++++|+|+ ++...+..+++.+|+...
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~---~~~~~i~~~~~~~~i~~~ 131 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSG---SPDEIIEPIAERLGIDDD 131 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEE---EEHHHHHHHHHHTTSSEG
T ss_pred hhHHHHHHHHHHCCCEEEEECC---CcHHHHHHHHHHcCCCce
Confidence 6666999999999999999999 668999999999999864
|
|
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.73 E-value=8.2e-08 Score=86.97 Aligned_cols=170 Identities=14% Similarity=0.138 Sum_probs=104.2
Q ss_pred CCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchhe-------------------eecchhHHhhhh
Q 017455 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIK-------------------IVGNEEVERSLY 245 (371)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~-------------------i~~~~~~~~~~f 245 (371)
+.||+.+.++.||..+.+|-.+||.++.....+...+.++|.+---+.+ ++.. +....-|
T Consensus 24 avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v~eeei~tsl~aa~~~~~~~~lrP~l~v~-d~a~~dF 102 (262)
T KOG3040|consen 24 AVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDVSEEEIFTSLPAARQYLEENQLRPYLIVD-DDALEDF 102 (262)
T ss_pred cCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCccHHHhcCccHHHHHHHHhcCCCceEEEc-ccchhhC
Confidence 7899999999999999999999998877777778888888864111111 1111 1122235
Q ss_pred cccccccc--ccCCchhH-----HHHHH---------HHHHhHHHHH---------------HHHHHHh-------hccC
Q 017455 246 GQFVLGKG--ISSGVDEQ-----LATEA---------RKAVSAQKQE---------------IAEEVAS-------MLKL 287 (371)
Q Consensus 246 ~~~v~g~~--v~~~~~~~-----~~~~~---------~k~~~~~~~~---------------~~~~~~~-------~~KP 287 (371)
++|-+.+. |..|.... .-+.+ .+.++--|.+ ++-..-+ ..||
T Consensus 103 ~gidTs~pn~VViglape~F~y~~ln~AFrvL~e~~k~~LIai~kgryykr~~Gl~lgpG~fv~aLeyatg~~a~vvGKP 182 (262)
T KOG3040|consen 103 DGIDTSDPNCVVIGLAPEGFSYQRLNRAFRVLLEMKKPLLIAIGKGRYYKRVDGLCLGPGPFVAALEYATGCEATVVGKP 182 (262)
T ss_pred CCccCCCCCeEEEecCcccccHHHHHHHHHHHHcCCCCeEEEecCceeeeeccccccCchHHHHHhhhccCceEEEecCC
Confidence 55544311 12221110 00000 0111111111 1111111 4577
Q ss_pred ccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHh-hHHHHHHcCCcEEEECCCCCCCccccc----ccccchH
Q 017455 288 SVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQS-GVAGAQRIGMPCVVMRSRCITTLPVSK----TQRLADM 362 (371)
Q Consensus 288 ~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~-Di~aA~~aGm~~v~v~~~~~~~~~l~~----~~~~~~~ 362 (371)
+|.. |+.+++.+|++|++++||||-.+ |+-+|++.||+.|.|++|-....+..+ ++..+++
T Consensus 183 ~~~f--------------Fe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~ 248 (262)
T KOG3040|consen 183 SPFF--------------FESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVPPDLTADN 248 (262)
T ss_pred CHHH--------------HHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCCcchhhhh
Confidence 7777 99999999999999999999886 899999999999999987554433332 3345666
Q ss_pred HHHhhhh
Q 017455 363 LCRILKS 369 (371)
Q Consensus 363 l~~~l~~ 369 (371)
+.+..+-
T Consensus 249 f~~AVd~ 255 (262)
T KOG3040|consen 249 FADAVDL 255 (262)
T ss_pred HHHHHHH
Confidence 6555543
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.70 E-value=4e-07 Score=83.21 Aligned_cols=132 Identities=12% Similarity=0.101 Sum_probs=79.5
Q ss_pred CCCCCccHHHHHHHHHHCCC-cEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchh
Q 017455 182 DAPLRPGVEDFVDDAYNEGI-PLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (371)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi-~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~ 260 (371)
.+|+.||+.++|+.+++.|. -+.|+|.. ..+++..+++.+|+.++|.. |.++.......=...+..... .+.+
T Consensus 82 ~iP~~Pgmv~lik~~ak~g~~eliIVSDa---NsfFIe~~Lea~~~~d~F~~-IfTNPa~~da~G~L~v~pyH~--~hsC 155 (256)
T KOG3120|consen 82 SIPIVPGMVRLIKSAAKLGCFELIIVSDA---NSFFIEEILEAAGIHDLFSE-IFTNPACVDASGRLLVRPYHT--QHSC 155 (256)
T ss_pred cCCCCccHHHHHHHHHhCCCceEEEEecC---chhHHHHHHHHccHHHHHHH-HhcCCcccCCCCcEEeecCCC--CCcc
Confidence 48899999999999999985 99999994 48999999999999999985 444322211000011111111 0000
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHH-HHcCCc
Q 017455 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGA-QRIGMP 339 (371)
Q Consensus 261 ~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA-~~aGm~ 339 (371)
-+. .+-+| +-.|+.-|..-..+-|+..++.|||||+.+|+=.- +..+..
T Consensus 156 ~~C------------------------PsNmC------Kg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D 205 (256)
T KOG3120|consen 156 NLC------------------------PSNMC------KGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACD 205 (256)
T ss_pred CcC------------------------chhhh------hhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCc
Confidence 000 00001 11121112222334578889999999999997544 344667
Q ss_pred EEEECCCCCC
Q 017455 340 CVVMRSRCIT 349 (371)
Q Consensus 340 ~v~v~~~~~~ 349 (371)
+++.+.++.-
T Consensus 206 ~ampRkgfpl 215 (256)
T KOG3120|consen 206 VAMPRKGFPL 215 (256)
T ss_pred eecccCCCch
Confidence 7777766653
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=5.2e-08 Score=90.07 Aligned_cols=40 Identities=18% Similarity=0.120 Sum_probs=36.4
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEC
Q 017455 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 344 (371)
Q Consensus 305 ~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~ 344 (371)
+++.+++++|++++++++|||+.||+.|++.+|+.+++-+
T Consensus 161 al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~N 200 (230)
T PRK01158 161 GLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVAN 200 (230)
T ss_pred HHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEecC
Confidence 3899999999999999999999999999999999876643
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.65 E-value=6.7e-08 Score=101.10 Aligned_cols=111 Identities=12% Similarity=0.156 Sum_probs=79.8
Q ss_pred CCCCccHHHHHHHHHHCCC-cEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhH
Q 017455 183 APLRPGVEDFVDDAYNEGI-PLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi-~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~ 261 (371)
.+++||+.++|+.|+++|+ +++++|| .+...+..+++++|++++|....
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTg---d~~~~a~~i~~~lgi~~~f~~~~--------------------------- 410 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTG---DRRAVAERVARELGIDEVHAELL--------------------------- 410 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcC---CCHHHHHHHHHHcCChhhhhccC---------------------------
Confidence 5689999999999999999 9999999 55899999999999988765320
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 017455 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (371)
Q Consensus 262 ~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v 341 (371)
| .+ -...+++++...++++||||+.+|+.+++++|+
T Consensus 411 -------------------------p-------~~---------K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~v--- 446 (536)
T TIGR01512 411 -------------------------P-------ED---------KLEIVKELREKYGPVAMVGDGINDAPALAAADV--- 446 (536)
T ss_pred -------------------------c-------HH---------HHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCE---
Confidence 1 00 022355566667899999999999999999996
Q ss_pred EECCC-CCCCcccccccccc--hHHHHhh
Q 017455 342 VMRSR-CITTLPVSKTQRLA--DMLCRIL 367 (371)
Q Consensus 342 ~v~~~-~~~~~~l~~~~~~~--~~l~~~l 367 (371)
.+..+ .........++.++ +++.++.
T Consensus 447 gia~g~~~~~~~~~~ad~vl~~~~l~~l~ 475 (536)
T TIGR01512 447 GIAMGASGSDVAIETADVVLLNDDLSRLP 475 (536)
T ss_pred EEEeCCCccHHHHHhCCEEEECCCHHHHH
Confidence 33333 22222233455554 4555444
|
. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.64 E-value=3.6e-08 Score=90.71 Aligned_cols=39 Identities=10% Similarity=0.043 Sum_probs=35.8
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEC
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 344 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~ 344 (371)
++.+++++|++++++++|||+.||+.|++.+|+.+++-+
T Consensus 154 i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~N 192 (225)
T TIGR01482 154 VKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFGVAVAN 192 (225)
T ss_pred HHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCceEEcCC
Confidence 889999999999999999999999999999999766643
|
catalyze the same reaction as SPP. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.1e-07 Score=90.93 Aligned_cols=40 Identities=13% Similarity=0.073 Sum_probs=37.1
Q ss_pred HHHHHHHcCCCC-CcEEEEeCCHhhHHHHHHcCCcEEEECC
Q 017455 306 LRAGAEYAEKPV-RNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (371)
Q Consensus 306 ~~~a~~~lgv~p-~e~I~IgDs~~Di~aA~~aGm~~v~v~~ 345 (371)
++.+++++|+++ +++++|||+.||+.|++.+|+.+++-+.
T Consensus 195 l~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA 235 (273)
T PRK00192 195 VRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGP 235 (273)
T ss_pred HHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCC
Confidence 888899999999 9999999999999999999998888653
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.61 E-value=6.2e-09 Score=95.70 Aligned_cols=39 Identities=13% Similarity=0.095 Sum_probs=36.4
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEC
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 344 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~ 344 (371)
++.+++++|++++++++|||+.||+.|++.+|+.+++-+
T Consensus 152 i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam~n 190 (215)
T TIGR01487 152 VEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAVAN 190 (215)
T ss_pred HHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEEcCC
Confidence 899999999999999999999999999999999877754
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.59 E-value=8.3e-08 Score=100.81 Aligned_cols=47 Identities=26% Similarity=0.439 Sum_probs=42.4
Q ss_pred CCCCccHHHHHHHHHHCC-CcEEEEcCCCCCCcHHHHHHHHHcCccccchh
Q 017455 183 APLRPGVEDFVDDAYNEG-IPLIVLTAYGKSGDRIARSVVEKLGSERISKI 232 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~G-i~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~ 232 (371)
.+++||+.++|+.|+++| ++++++|| .....++.+++++|++++|..
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTg---d~~~~a~~i~~~lgi~~~f~~ 430 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTG---DNRSAAEAVAAELGIDEVHAE 430 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeC---CCHHHHHHHHHHhCCCeeecc
Confidence 569999999999999999 99999999 558889999999999887753
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.59 E-value=6.7e-07 Score=79.66 Aligned_cols=109 Identities=23% Similarity=0.293 Sum_probs=71.5
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcC-ccccchheeecchhHHhhhhcc-ccccccccCCch
Q 017455 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLG-SERISKIKIVGNEEVERSLYGQ-FVLGKGISSGVD 259 (371)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lg-l~~~f~~~i~~~~~~~~~~f~~-~v~g~~v~~~~~ 259 (371)
.+.+.||.+++++.+++++++++|+|+ +.+.++..++++++ -++.-..-|++++.....--.. ++-.++-..|+
T Consensus 71 ~i~Idp~fKef~e~ike~di~fiVvSs---Gm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~- 146 (220)
T COG4359 71 DIKIDPGFKEFVEWIKEHDIPFIVVSS---GMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGH- 146 (220)
T ss_pred hcccCccHHHHHHHHHHcCCCEEEEeC---CCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCC-
Confidence 367999999999999999999999999 45889999999875 3444444456554432211001 11111122222
Q ss_pred hHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCc
Q 017455 260 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 339 (371)
Q Consensus 260 ~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~ 339 (371)
+ .+.+ ...+.-.++..+|+||+.+|+.||+....-
T Consensus 147 --------------------------------d------K~~v-------I~~l~e~~e~~fy~GDsvsDlsaaklsDll 181 (220)
T COG4359 147 --------------------------------D------KSSV-------IHELSEPNESIFYCGDSVSDLSAAKLSDLL 181 (220)
T ss_pred --------------------------------C------cchh-------HHHhhcCCceEEEecCCcccccHhhhhhhH
Confidence 1 1122 344455677799999999999999987653
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=2.7e-08 Score=94.41 Aligned_cols=40 Identities=13% Similarity=0.115 Sum_probs=36.7
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEC
Q 017455 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 344 (371)
Q Consensus 305 ~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~ 344 (371)
|++..++++|++++++++|||+.||++|.+.+|..+++=+
T Consensus 200 al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~N 239 (270)
T PRK10513 200 GVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGN 239 (270)
T ss_pred HHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecC
Confidence 5899999999999999999999999999999999776644
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=2.5e-08 Score=95.02 Aligned_cols=40 Identities=10% Similarity=0.132 Sum_probs=36.3
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEC
Q 017455 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 344 (371)
Q Consensus 305 ~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~ 344 (371)
|++..++++|+++++++.|||+.||++|.+.+|..+++-+
T Consensus 192 al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~N 231 (272)
T PRK15126 192 ALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGN 231 (272)
T ss_pred HHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccC
Confidence 5899999999999999999999999999999998666643
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=98.51 E-value=6.7e-07 Score=84.00 Aligned_cols=93 Identities=9% Similarity=0.144 Sum_probs=67.6
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccc-cchheeecchhHHhhhhccccccccccCCchhH
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~-~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~ 261 (371)
..++||+.++|+.|+++|++++++||+.+.. ......++.+|+.. +|+.+ +++.+....
T Consensus 23 ~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~-~~~~~~L~~~gl~~~~~~~I-i~s~~~~~~------------------ 82 (242)
T TIGR01459 23 NHTYPGAVQNLNKIIAQGKPVYFVSNSPRNI-FSLHKTLKSLGINADLPEMI-ISSGEIAVQ------------------ 82 (242)
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCCCh-HHHHHHHHHCCCCccccceE-EccHHHHHH------------------
Confidence 4589999999999999999999999965322 22236789999987 88874 444332110
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCC
Q 017455 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 338 (371)
Q Consensus 262 ~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm 338 (371)
.+..+++++|++++++++|||+..|+.....+|.
T Consensus 83 -------------------------------------------~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 83 -------------------------------------------MILESKKRFDIRNGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred -------------------------------------------HHHhhhhhccCCCceEEEeCCcccchhhhcCCCc
Confidence 0555667778888888888888888777665554
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=98.48 E-value=4.1e-07 Score=87.27 Aligned_cols=47 Identities=19% Similarity=0.229 Sum_probs=41.0
Q ss_pred ccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeec
Q 017455 187 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVG 236 (371)
Q Consensus 187 pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~ 236 (371)
||+.++|++|+++|++++|+|++. ...+...++.+|+..+|+.++.+
T Consensus 149 PgV~EaL~~LkekGikLaIaTS~~---Re~v~~~L~~lGLd~YFdvIIs~ 195 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSYGD---RDHVVESMRKVKLDRYFDIIISG 195 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCC---HHHHHHHHHHcCCCcccCEEEEC
Confidence 889999999999999999999954 77888999999999999875433
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=98.47 E-value=8.8e-08 Score=84.85 Aligned_cols=116 Identities=14% Similarity=0.116 Sum_probs=85.8
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccc-cchheeecchhHHhhhhccccccccccCCchhH
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~-~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~ 261 (371)
+..|||+.+||+.|.+. +.++|.|++ ...+++.+++.+++.. +|..++... ....
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts~---~~~yA~~il~~ldp~~~~f~~~l~r~-~~~~------------------- 96 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTAS---LEEYADPVLDILDRGGKVISRRLYRE-SCVF------------------- 96 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcCC---cHHHHHHHHHHHCcCCCEEeEEEEcc-ccEE-------------------
Confidence 55899999999999987 999999995 4899999999999875 777644321 1100
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 017455 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (371)
Q Consensus 262 ~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v 341 (371)
.||. |.+.++.+|.+++++|+|||+..++.++..+|+++.
T Consensus 97 -----------------------~~~~-----------------~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~ 136 (162)
T TIGR02251 97 -----------------------TNGK-----------------YVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIK 136 (162)
T ss_pred -----------------------eCCC-----------------EEeEchhcCCChhhEEEEeCChhhhccCccCEeecC
Confidence 0111 345578889999999999999999999999999877
Q ss_pred EECCCCCCCcccccccccchHHHHhhhhc
Q 017455 342 VMRSRCITTLPVSKTQRLADMLCRILKSI 370 (371)
Q Consensus 342 ~v~~~~~~~~~l~~~~~~~~~l~~~l~~i 370 (371)
..... . .+..+-.+.+.|+.|
T Consensus 137 ~f~~~-~-------~D~~L~~l~~~L~~l 157 (162)
T TIGR02251 137 SWFGD-P-------NDTELLNLIPFLEGL 157 (162)
T ss_pred CCCCC-C-------CHHHHHHHHHHHHHH
Confidence 76521 2 222345566666655
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.46 E-value=9.1e-07 Score=81.47 Aligned_cols=37 Identities=5% Similarity=-0.031 Sum_probs=34.6
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
++.+++++|++++++++|||+.||+.|.+.+|..+++
T Consensus 184 l~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 184 ANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred HHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 7899999999999999999999999999999987664
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.44 E-value=9.9e-08 Score=90.38 Aligned_cols=40 Identities=13% Similarity=0.111 Sum_probs=36.9
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEC
Q 017455 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 344 (371)
Q Consensus 305 ~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~ 344 (371)
|++..++++|++++++++|||+.||++|.+.+|..+++=+
T Consensus 193 al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~N 232 (264)
T COG0561 193 ALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGN 232 (264)
T ss_pred HHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccC
Confidence 4899999999999999999999999999999999887754
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.41 E-value=5e-07 Score=95.08 Aligned_cols=42 Identities=26% Similarity=0.510 Sum_probs=38.6
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcc
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~ 227 (371)
.+++||+.++|+.|+++|++++++|+ +....++.+.+.+|++
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSg---d~~~~a~~ia~~lgi~ 445 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTG---DNRKTAKAVAKELGIN 445 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcC---CCHHHHHHHHHHcCCc
Confidence 46899999999999999999999999 5588999999999996
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.40 E-value=2.3e-07 Score=87.93 Aligned_cols=40 Identities=18% Similarity=0.280 Sum_probs=36.9
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEC
Q 017455 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 344 (371)
Q Consensus 305 ~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~ 344 (371)
|++..++++|++++++++|||+.||++|.+.+|..+++-+
T Consensus 194 al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~N 233 (266)
T PRK10976 194 ALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGN 233 (266)
T ss_pred HHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecC
Confidence 5899999999999999999999999999999999776654
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.39 E-value=5.9e-07 Score=85.73 Aligned_cols=39 Identities=8% Similarity=-0.057 Sum_probs=36.2
Q ss_pred HHHHHHHHcCC---CCCcEEEEeCCHhhHHHHHHcCCcEEEE
Q 017455 305 ALRAGAEYAEK---PVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (371)
Q Consensus 305 ~~~~a~~~lgv---~p~e~I~IgDs~~Di~aA~~aGm~~v~v 343 (371)
|++..++++|+ ++++++.|||+.||++|.+.+|..+++-
T Consensus 191 al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~ 232 (271)
T PRK03669 191 AANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK 232 (271)
T ss_pred HHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec
Confidence 48999999999 9999999999999999999999877775
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.5e-06 Score=95.56 Aligned_cols=87 Identities=11% Similarity=0.193 Sum_probs=69.6
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHH
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~ 262 (371)
-+++||+.+.|+.|+++|++++++|+ .....++.+.+.+|++++|....
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tg---d~~~~a~~ia~~lgi~~~~~~~~---------------------------- 697 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTG---DNPTTANAIAKEAGIDEVIAGVL---------------------------- 697 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcCCCEEEeCCC----------------------------
Confidence 36899999999999999999999999 45788899999999987654310
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcE
Q 017455 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (371)
Q Consensus 263 ~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~ 340 (371)
| +. -..+++.++..+++++||||+.||+.+++++|+..
T Consensus 698 -------------------------------p--~~-------K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgi 735 (834)
T PRK10671 698 -------------------------------P--DG-------KAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGI 735 (834)
T ss_pred -------------------------------H--HH-------HHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeE
Confidence 0 00 12245566777889999999999999999999943
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.26 E-value=5.2e-06 Score=87.37 Aligned_cols=40 Identities=5% Similarity=0.006 Sum_probs=36.4
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEC
Q 017455 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 344 (371)
Q Consensus 305 ~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~ 344 (371)
|++..++++|++++++++|||+.||++|.+.+|..+++-+
T Consensus 511 ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgN 550 (580)
T PLN02887 511 GVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSN 550 (580)
T ss_pred HHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCC
Confidence 4899999999999999999999999999999999766644
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=98.18 E-value=1.1e-05 Score=71.87 Aligned_cols=97 Identities=12% Similarity=0.171 Sum_probs=70.7
Q ss_pred CCCccHHHHHHHHHHCCCc--EEEEcCCCCC----CcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCC
Q 017455 184 PLRPGVEDFVDDAYNEGIP--LIVLTAYGKS----GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSG 257 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~--v~IvTn~~~~----~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~ 257 (371)
.+.|.+.+.++++++.+.. +.|+||+..+ ....++.+.+.+|+.-+.-.
T Consensus 59 ~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpvl~h~------------------------- 113 (168)
T PF09419_consen 59 EIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPVLRHR------------------------- 113 (168)
T ss_pred cCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcEEEeC-------------------------
Confidence 3678888889999998764 9999996311 14556777778886521100
Q ss_pred chhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCC-----CCCcEEEEeCCH-hhHH
Q 017455 258 VDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK-----PVRNCFLIAGSQ-SGVA 331 (371)
Q Consensus 258 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv-----~p~e~I~IgDs~-~Di~ 331 (371)
..|| .- +..+++.++. +|+|+++|||-. .||.
T Consensus 114 --------------------------~kKP--~~--------------~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 114 --------------------------AKKP--GC--------------FREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred --------------------------CCCC--cc--------------HHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 1255 22 5666777654 499999999997 6999
Q ss_pred HHHHcCCcEEEECCCC
Q 017455 332 GAQRIGMPCVVMRSRC 347 (371)
Q Consensus 332 aA~~aGm~~v~v~~~~ 347 (371)
+|.+.|+.+|++.+|-
T Consensus 152 ~gN~~G~~tilv~~gv 167 (168)
T PF09419_consen 152 MGNRMGSYTILVTDGV 167 (168)
T ss_pred HhhccCceEEEEecCc
Confidence 9999999999998763
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=98.16 E-value=2.2e-05 Score=74.51 Aligned_cols=120 Identities=16% Similarity=0.254 Sum_probs=83.3
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcc--cc-chhe-------eecchhHHhhhhccccccc
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE--RI-SKIK-------IVGNEEVERSLYGQFVLGK 252 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~--~~-f~~~-------i~~~~~~~~~~f~~~v~g~ 252 (371)
...-+.+.++|+.|+++|+++..+|....+......+.|+++|++ .. |... ...........+.++....
T Consensus 80 ~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~ 159 (252)
T PF11019_consen 80 ELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTG 159 (252)
T ss_pred EEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEeC
Confidence 447889999999999999999999998766677777888889985 22 1100 0011111122233444444
Q ss_pred cccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHH
Q 017455 253 GISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAG 332 (371)
Q Consensus 253 ~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~a 332 (371)
+..+|. ++...+.++|..|+.+|||+|+..++..
T Consensus 160 ~~~KG~----------------------------------------------~L~~fL~~~~~~pk~IIfIDD~~~nl~s 193 (252)
T PF11019_consen 160 GQDKGE----------------------------------------------VLKYFLDKINQSPKKIIFIDDNKENLKS 193 (252)
T ss_pred CCccHH----------------------------------------------HHHHHHHHcCCCCCeEEEEeCCHHHHHH
Confidence 444431 3899999999999999999999987654
Q ss_pred ----HHHcCCcEEEECCCCC
Q 017455 333 ----AQRIGMPCVVMRSRCI 348 (371)
Q Consensus 333 ----A~~aGm~~v~v~~~~~ 348 (371)
++..|+..+++.....
T Consensus 194 v~~a~k~~~I~f~G~~Yt~~ 213 (252)
T PF11019_consen 194 VEKACKKSGIDFIGFHYTGA 213 (252)
T ss_pred HHHHHhhCCCcEEEEEEcch
Confidence 4556999998875543
|
The function is not known. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.16 E-value=1.3e-05 Score=75.59 Aligned_cols=39 Identities=13% Similarity=0.110 Sum_probs=36.2
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEE
Q 017455 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (371)
Q Consensus 305 ~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v 343 (371)
+++.+++.+|++++++++|||+.||+.|++.+|+.+++-
T Consensus 192 ~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~ 230 (256)
T TIGR00099 192 ALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG 230 (256)
T ss_pred HHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec
Confidence 489999999999999999999999999999999987764
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.16 E-value=3e-06 Score=79.84 Aligned_cols=42 Identities=7% Similarity=-0.045 Sum_probs=38.4
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEECCCC
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSRC 347 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~~ 347 (371)
++.+++.+|+++++|++|||+.||+.|++.+|...|.+.+..
T Consensus 172 l~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~ 213 (249)
T TIGR01485 172 LQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQ 213 (249)
T ss_pred HHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCH
Confidence 899999999999999999999999999999888888887653
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=98.10 E-value=6.6e-06 Score=74.50 Aligned_cols=32 Identities=13% Similarity=0.229 Sum_probs=25.3
Q ss_pred EEEeCCHhhHHHHHHcCCcEEEECCCCCCCcc
Q 017455 321 FLIAGSQSGVAGAQRIGMPCVVMRSRCITTLP 352 (371)
Q Consensus 321 I~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~ 352 (371)
++|+|+..++..+...|+++|++..+++....
T Consensus 139 vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~ 170 (191)
T PF06941_consen 139 VLIDDRPHNLEQFANAGIPVILFDQPYNRDES 170 (191)
T ss_dssp EEEESSSHHHSS-SSESSEEEEE--GGGTT--
T ss_pred EEecCChHHHHhccCCCceEEEEcCCCCCCCC
Confidence 89999999999999999999999988876554
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=98.10 E-value=7.9e-06 Score=72.21 Aligned_cols=98 Identities=15% Similarity=0.235 Sum_probs=64.2
Q ss_pred CCccHHHHHHHHHHCCCcEEEEcCCCCCCc-----------HHHHHHHHHcCccccchheeecchhHHhhhhcccccccc
Q 017455 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGD-----------RIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKG 253 (371)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~-----------~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~ 253 (371)
..|+|.+.|.+|.+.|++++|+||-..-.. ..+..+++.+++.-. + +... ..+
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip~~--~-~~a~-------------~~d 93 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIPIQ--V-YAAP-------------HKD 93 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS-EE--E-EECG-------------CSS
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCceE--E-EecC-------------CCC
Confidence 456899999999999999999999542111 233444555554411 0 1111 111
Q ss_pred ccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCC----CCCcEEEEeCC---
Q 017455 254 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK----PVRNCFLIAGS--- 326 (371)
Q Consensus 254 v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv----~p~e~I~IgDs--- 326 (371)
..+||.+.+ ++.+++.++. +.++++||||+
T Consensus 94 -----------------------------~~RKP~~GM--------------~~~~~~~~~~~~~id~~~Sf~VGDaagr 130 (159)
T PF08645_consen 94 -----------------------------PCRKPNPGM--------------WEFALKDYNDGVEIDLANSFYVGDAAGR 130 (159)
T ss_dssp -----------------------------TTSTTSSHH--------------HHHHCCCTSTT--S-CCC-EEEESSCHC
T ss_pred -----------------------------CCCCCchhH--------------HHHHHHhccccccccccceEEEeccCCC
Confidence 167999999 9999999874 89999999996
Q ss_pred --------HhhHHHHHHcCCcEE
Q 017455 327 --------QSGVAGAQRIGMPCV 341 (371)
Q Consensus 327 --------~~Di~aA~~aGm~~v 341 (371)
..|..-|.++|++..
T Consensus 131 ~~~~~d~s~~D~~fA~N~gi~f~ 153 (159)
T PF08645_consen 131 SKKKKDFSDSDRKFALNCGIKFY 153 (159)
T ss_dssp TB-S--S--HHHHHHHHHT--EE
T ss_pred CCcccccChhHHHHHHHcCCccc
Confidence 679999999999854
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=98.06 E-value=1e-05 Score=77.83 Aligned_cols=49 Identities=20% Similarity=0.187 Sum_probs=42.5
Q ss_pred ccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecch
Q 017455 187 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNE 238 (371)
Q Consensus 187 pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~ 238 (371)
||+.++|++|+++|++++|+||+. ...+...++.+|+.++|+.++.+++
T Consensus 151 p~V~EtL~eLkekGikLaIvTNg~---Re~v~~~Le~lgL~~yFDvII~~g~ 199 (303)
T PHA03398 151 PFVYDSLDELKERGCVLVLWSYGN---REHVVHSLKETKLEGYFDIIICGGR 199 (303)
T ss_pred hhHHHHHHHHHHCCCEEEEEcCCC---hHHHHHHHHHcCCCccccEEEECCC
Confidence 788899999999999999999943 7788999999999999987655444
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.02 E-value=1.2e-05 Score=89.04 Aligned_cols=114 Identities=22% Similarity=0.297 Sum_probs=73.3
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHHH
Q 017455 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 263 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~ 263 (371)
+++||+.+.|+.|+++|++++++|+ .....+..+.+.+|+...+..+ +++++... -.++.+
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTG---D~~~tA~~ia~~~Gi~~~~~~~-v~g~~l~~--------------~~~~~l- 588 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITG---DSQETAVSIARRLGMPSKTSQS-VSGEKLDA--------------MDDQQL- 588 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCCCCCCce-eEhHHhHh--------------CCHHHH-
Confidence 7899999999999999999999999 5588899999999998765543 23322211 110000
Q ss_pred HHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 017455 264 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (371)
Q Consensus 264 ~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v 341 (371)
. ++. +-..-...+.|+.+-.+| ..+++. .+.+.|+||+.||+.|+++|++...
T Consensus 589 ---~--------~~~-------~~~~Vfar~~P~~K~~iv----~~lq~~---g~~v~mvGDGvND~pAl~~AdVGia 641 (884)
T TIGR01522 589 ---S--------QIV-------PKVAVFARASPEHKMKIV----KALQKR---GDVVAMTGDGVNDAPALKLADIGVA 641 (884)
T ss_pred ---H--------HHh-------hcCeEEEECCHHHHHHHH----HHHHHC---CCEEEEECCCcccHHHHHhCCeeEe
Confidence 0 000 000111223344333332 223333 4789999999999999999996443
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=98.01 E-value=1.4e-05 Score=74.71 Aligned_cols=49 Identities=22% Similarity=0.319 Sum_probs=40.6
Q ss_pred cCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccc
Q 017455 180 SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (371)
Q Consensus 180 ~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~ 228 (371)
....++.||+.+|++.++++|++|.++||........+..-|...|...
T Consensus 111 ~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~ 159 (229)
T PF03767_consen 111 SGKAPAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPG 159 (229)
T ss_dssp CTGGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTST
T ss_pred cccCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCc
Confidence 3345789999999999999999999999977666677777788888654
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.00 E-value=2e-05 Score=79.94 Aligned_cols=43 Identities=14% Similarity=-0.048 Sum_probs=37.5
Q ss_pred HHHHHHHHc---CCCCCcEEEEeCCHhhHHHHHHcCCcEEEECCCC
Q 017455 305 ALRAGAEYA---EKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSRC 347 (371)
Q Consensus 305 ~~~~a~~~l---gv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~~ 347 (371)
|++..++++ |++++++++|||+.||++|.+.+|...|.+.++.
T Consensus 179 Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~ 224 (413)
T PLN02382 179 ALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQ 224 (413)
T ss_pred HHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCc
Confidence 488889999 9999999999999999999999997666666543
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=2.3e-05 Score=85.09 Aligned_cols=43 Identities=23% Similarity=0.327 Sum_probs=39.4
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcccc
Q 017455 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~ 229 (371)
+++||+.+.|+.|+++|++++++|+ .....++.+.+.+|++.+
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTG---d~~~~a~~ia~~lgi~~~ 610 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTG---DNPRAAAAIAGELGIDFR 610 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCCee
Confidence 7899999999999999999999999 558899999999999743
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.95 E-value=1.1e-05 Score=75.26 Aligned_cols=37 Identities=5% Similarity=0.047 Sum_probs=31.9
Q ss_pred HHHHHHHcCC--CCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 306 LRAGAEYAEK--PVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 306 ~~~a~~~lgv--~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
++..++.+++ ++.+|++|||+.||+.|.+.+|+.++.
T Consensus 186 l~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~v 224 (225)
T TIGR02461 186 IKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFLV 224 (225)
T ss_pred HHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEec
Confidence 6777788866 677999999999999999999997653
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.92 E-value=5.8e-05 Score=63.92 Aligned_cols=116 Identities=8% Similarity=0.091 Sum_probs=86.7
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccc--cchheeecchhHHhhhhccccccccccCCch
Q 017455 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER--ISKIKIVGNEEVERSLYGQFVLGKGISSGVD 259 (371)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~--~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~ 259 (371)
.-++++.|.+.|++|.+. +.++|.|+-. ...+....+..|+.- .|.. .
T Consensus 28 gGklf~ev~e~iqeL~d~-V~i~IASgDr---~gsl~~lae~~gi~~~rv~a~----a---------------------- 77 (152)
T COG4087 28 GGKLFSEVSETIQELHDM-VDIYIASGDR---KGSLVQLAEFVGIPVERVFAG----A---------------------- 77 (152)
T ss_pred CcEEcHhhHHHHHHHHHh-heEEEecCCc---chHHHHHHHHcCCceeeeecc----c----------------------
Confidence 456899999999999999 9999999833 455667777777642 2211 0
Q ss_pred hHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCc
Q 017455 260 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 339 (371)
Q Consensus 260 ~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~ 339 (371)
+++. =....+.|+-+-+.|+||||+.||+.+.++|.+.
T Consensus 78 -----------------------------------~~e~-------K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlG 115 (152)
T COG4087 78 -----------------------------------DPEM-------KAKIIRELKKRYEKVVMVGNGANDILALREADLG 115 (152)
T ss_pred -----------------------------------CHHH-------HHHHHHHhcCCCcEEEEecCCcchHHHhhhcccc
Confidence 0110 1334666776778999999999999999999998
Q ss_pred EEEECCCCCCCcccccccccchHHHHhhhh
Q 017455 340 CVVMRSRCITTLPVSKTQRLADMLCRILKS 369 (371)
Q Consensus 340 ~v~v~~~~~~~~~l~~~~~~~~~l~~~l~~ 369 (371)
.+.+.....+...+..++.++.++.++++-
T Consensus 116 I~tiq~e~v~~r~l~~ADvvik~i~e~ldl 145 (152)
T COG4087 116 ICTIQQEGVPERLLLTADVVLKEIAEILDL 145 (152)
T ss_pred eEEeccCCcchHHHhhchhhhhhHHHHHHH
Confidence 888877665656677888888888888763
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.87 E-value=3e-05 Score=67.62 Aligned_cols=82 Identities=13% Similarity=0.195 Sum_probs=68.5
Q ss_pred HHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHHHHHHHHHHhH
Q 017455 193 VDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSA 272 (371)
Q Consensus 193 L~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~ 272 (371)
|+.|.+.|++++|+|+.. ...++...+.||+.+++..+ . .|
T Consensus 44 ik~l~~~Gi~vAIITGr~---s~ive~Ra~~LGI~~~~qG~----~----------------------------dK---- 84 (170)
T COG1778 44 IKLLLKSGIKVAIITGRD---SPIVEKRAKDLGIKHLYQGI----S----------------------------DK---- 84 (170)
T ss_pred HHHHHHcCCeEEEEeCCC---CHHHHHHHHHcCCceeeech----H----------------------------hH----
Confidence 567778899999999954 68899999999999876542 0 01
Q ss_pred HHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEE
Q 017455 273 QKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (371)
Q Consensus 273 ~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v 343 (371)
..+|+..++++++.+++|.||||-.+|+...++.|+.+..-
T Consensus 85 ------------------------------~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~ 125 (170)
T COG1778 85 ------------------------------LAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA 125 (170)
T ss_pred ------------------------------HHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCccccc
Confidence 12499999999999999999999999999999999987664
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00017 Score=67.48 Aligned_cols=50 Identities=14% Similarity=0.094 Sum_probs=38.5
Q ss_pred cCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcccc
Q 017455 180 SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229 (371)
Q Consensus 180 ~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~ 229 (371)
....++.|++.++++.|+++|++|.++|+.+......+..-|.+.|...+
T Consensus 116 ~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~ 165 (229)
T TIGR01675 116 KGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW 165 (229)
T ss_pred cCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc
Confidence 34578999999999999999999999999653333335566777776643
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00019 Score=76.18 Aligned_cols=39 Identities=15% Similarity=0.150 Sum_probs=35.5
Q ss_pred HHHHHHHHcCCCCCcEEEE--eCCHhhHHHHHHcCCcEEEE
Q 017455 305 ALRAGAEYAEKPVRNCFLI--AGSQSGVAGAQRIGMPCVVM 343 (371)
Q Consensus 305 ~~~~a~~~lgv~p~e~I~I--gDs~~Di~aA~~aGm~~v~v 343 (371)
|++..++.+|++.++++.| ||+.||+.|.+.+|..+++=
T Consensus 617 AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM~ 657 (694)
T PRK14502 617 AIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILVQ 657 (694)
T ss_pred HHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEEc
Confidence 4899999999999999988 99999999999999987773
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00086 Score=69.62 Aligned_cols=102 Identities=19% Similarity=0.204 Sum_probs=66.5
Q ss_pred CCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHH-cCccccchheeecch-hH-HhhhhccccccccccCCchhH
Q 017455 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKIKIVGNE-EV-ERSLYGQFVLGKGISSGVDEQ 261 (371)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~-lgl~~~f~~~i~~~~-~~-~~~~f~~~v~g~~v~~~~~~~ 261 (371)
++|.+.+.+ +++|. .+|+|. +++.+++.+.+. +|++.. ++.+ ++ ..+.|.+.+.|.+...|.
T Consensus 111 l~~~a~~~~---~~~g~-~vvVSA---Sp~~~Vepfa~~~LGid~V-----IgTeLev~~~G~~TG~i~g~~~c~Ge--- 175 (497)
T PLN02177 111 VHPETWRVF---NSFGK-RYIITA---SPRIMVEPFVKTFLGADKV-----LGTELEVSKSGRATGFMKKPGVLVGD--- 175 (497)
T ss_pred cCHHHHHHH---HhCCC-EEEEEC---CcHHHHHHHHHHcCCCCEE-----EecccEECcCCEEeeeecCCCCCccH---
Confidence 677766654 45675 499999 668999999976 899873 2322 33 245566566554433331
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 017455 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (371)
Q Consensus 262 ~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v 341 (371)
.| ...+.+.+|.+... ++.|||.+|..+...++-..+
T Consensus 176 -----~K-------------------------------------v~rl~~~~g~~~~~-~aYgDS~sD~plL~~a~e~y~ 212 (497)
T PLN02177 176 -----HK-------------------------------------RDAVLKEFGDALPD-LGLGDRETDHDFMSICKEGYM 212 (497)
T ss_pred -----HH-------------------------------------HHHHHHHhCCCCce-EEEECCccHHHHHHhCCccEE
Confidence 01 23333556654444 899999999999999998766
Q ss_pred EEC
Q 017455 342 VMR 344 (371)
Q Consensus 342 ~v~ 344 (371)
.-.
T Consensus 213 V~~ 215 (497)
T PLN02177 213 VPR 215 (497)
T ss_pred eCC
Confidence 654
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00022 Score=68.07 Aligned_cols=49 Identities=18% Similarity=0.251 Sum_probs=37.9
Q ss_pred cCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccc
Q 017455 180 SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (371)
Q Consensus 180 ~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~ 228 (371)
....++.||+.+|.+.++++|++|.++||........+..-|.+.|...
T Consensus 141 ~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~ 189 (275)
T TIGR01680 141 KGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHT 189 (275)
T ss_pred cccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCC
Confidence 3457899999999999999999999999976434445555566666643
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00072 Score=60.30 Aligned_cols=108 Identities=11% Similarity=0.126 Sum_probs=66.2
Q ss_pred CCccHHHHHHHHHHCCCcEEEEcCCCCCCcHH-HHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHHH
Q 017455 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRI-ARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 263 (371)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~-~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~ 263 (371)
|..-+++||+-...+|-.++.+|+.+....+. ...+.+.+.+.....+. ..|+
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~---------------f~Gd----------- 168 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVI---------------FAGD----------- 168 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCccee---------------eccC-----------
Confidence 55567778888888999999999976333222 33333455554332221 1121
Q ss_pred HHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEE
Q 017455 264 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (371)
Q Consensus 264 ~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v 343 (371)
||.|.-|+ + -.+++.-+++ |+.|||-+||.||+.+|.+.|-+
T Consensus 169 ----------------------k~k~~qy~-------K-----t~~i~~~~~~----IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 169 ----------------------KPKPGQYT-------K-----TQWIQDKNIR----IHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred ----------------------CCCccccc-------c-----cHHHHhcCce----EEecCCchhhhHHHhcCccceeE
Confidence 33333321 1 1234444544 99999999999999999998876
Q ss_pred C-CCCCCCcccccc
Q 017455 344 R-SRCITTLPVSKT 356 (371)
Q Consensus 344 ~-~~~~~~~~l~~~ 356 (371)
- .......+++.+
T Consensus 211 lRAaNSTy~PlP~a 224 (237)
T COG3700 211 LRAANSTYKPLPQA 224 (237)
T ss_pred EecCCccCCcCccc
Confidence 3 444555566644
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00029 Score=62.09 Aligned_cols=26 Identities=35% Similarity=0.516 Sum_probs=23.2
Q ss_pred CCccHHHHHHHHHHCCCcEEEEcCCC
Q 017455 185 LRPGVEDFVDDAYNEGIPLIVLTAYG 210 (371)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~IvTn~~ 210 (371)
..|++.++++.++++|++++++|+..
T Consensus 28 ~~~~~~~a~~~l~~~G~~ivy~TGRp 53 (157)
T smart00775 28 THPGVAKLYRDIQNNGYKILYLTARP 53 (157)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEcCCc
Confidence 45899999999999999999999954
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=97.63 E-value=8.8e-05 Score=79.40 Aligned_cols=44 Identities=16% Similarity=0.293 Sum_probs=40.3
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccc
Q 017455 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f 230 (371)
+++||+.+.++.|++.|++++++|+ .....+..+.+.+|+++++
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTG---D~~~ta~~iA~~lGI~~v~ 489 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITG---DNRLTAAAIAAEAGVDDFI 489 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCCEEE
Confidence 7899999999999999999999999 5588999999999998754
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00022 Score=79.40 Aligned_cols=42 Identities=26% Similarity=0.523 Sum_probs=37.8
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccc
Q 017455 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~ 228 (371)
+++||+.+.|+.|+++|+++.++|+ .....+..+.+.+|+..
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTG---D~~~tA~~ia~~~gi~~ 578 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITG---DNKETAEAICRRIGIFS 578 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecC---CCHHHHHHHHHHcCCCC
Confidence 6899999999999999999999999 44688899999999853
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0017 Score=60.17 Aligned_cols=107 Identities=10% Similarity=0.144 Sum_probs=73.2
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHH
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~ 262 (371)
...+++|...++..++.|++++|.|.++ ......+...-+-.+.- +...+.|+. ..|.
T Consensus 122 ~~v~aDv~~a~e~w~~~g~~vyIYSSgs---v~AqKllfg~s~~gdl~--------~y~~gyfDt-~iG~---------- 179 (254)
T KOG2630|consen 122 AHVYADVLPAIERWSGEGVRVYIYSSGS---VAAQKLLFGYSDAGDLR--------KYISGYFDT-TIGL---------- 179 (254)
T ss_pred ccccchhHHHHHHHhhcCceEEEEcCCc---HHHHHHHHcccCcchHH--------HHhhhhhhc-cccc----------
Confidence 4589999999999999999999999853 33333333322211110 112222322 1121
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 263 ~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
|-.-.+ |..+.+.+|.++.|.+|.-|-..-..+|+.+|+.+.+
T Consensus 180 -----------------------K~e~~s--------------y~~I~~~Ig~s~~eiLfLTd~~~Ea~aa~~aGl~a~l 222 (254)
T KOG2630|consen 180 -----------------------KVESQS--------------YKKIGHLIGKSPREILFLTDVPREAAAARKAGLQAGL 222 (254)
T ss_pred -----------------------eehhHH--------------HHHHHHHhCCChhheEEeccChHHHHHHHhcccceee
Confidence 111222 8999999999999999999999999999999999888
Q ss_pred ECCCCC
Q 017455 343 MRSRCI 348 (371)
Q Consensus 343 v~~~~~ 348 (371)
+-++..
T Consensus 223 ~~rPgn 228 (254)
T KOG2630|consen 223 VSRPGN 228 (254)
T ss_pred eecCCC
Confidence 865544
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00076 Score=65.85 Aligned_cols=92 Identities=16% Similarity=0.114 Sum_probs=65.6
Q ss_pred CCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHHHH
Q 017455 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLAT 264 (371)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~ 264 (371)
+.||+.++|+.|+++|++++++||.+..........++.+|+...++.++.+. .
T Consensus 45 ~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts~-~------------------------- 98 (311)
T PLN02645 45 LIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSSS-F------------------------- 98 (311)
T ss_pred cCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeehH-H-------------------------
Confidence 67999999999999999999999965333333344557888875555432211 0
Q ss_pred HHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 265 EARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 265 ~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
+....++..+......|+++++..+.+.++.+|+.++.
T Consensus 99 ----------------------------------------~~~~~l~~~~~~~~~~V~viG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 99 ----------------------------------------AAAAYLKSINFPKDKKVYVIGEEGILEELELAGFQYLG 136 (311)
T ss_pred ----------------------------------------HHHHHHHhhccCCCCEEEEEcCHHHHHHHHHCCCEEec
Confidence 03344555555555679999999999999999998765
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.49 E-value=5.6e-05 Score=72.88 Aligned_cols=37 Identities=11% Similarity=-0.018 Sum_probs=28.5
Q ss_pred HHHHHHHcCC--CCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 306 LRAGAEYAEK--PVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 306 ~~~a~~~lgv--~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
++...+.+.- .+-.+|.+|||+||+.|.+.+-..+|+
T Consensus 213 ~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vvi 251 (302)
T PRK12702 213 VQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVVL 251 (302)
T ss_pred HHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEEe
Confidence 4444444443 345899999999999999999998877
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00023 Score=76.32 Aligned_cols=44 Identities=16% Similarity=0.334 Sum_probs=40.5
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccc
Q 017455 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f 230 (371)
+++||+.+.+++||+.|+++.++|+ .....+..+-+.+|++++|
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTG---Dn~~TA~aIA~elGI~~v~ 484 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTG---DNELTAATIAKEAGVDRFV 484 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCceEE
Confidence 7899999999999999999999999 5688899999999998755
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00023 Score=76.37 Aligned_cols=44 Identities=16% Similarity=0.363 Sum_probs=40.2
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccc
Q 017455 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f 230 (371)
+++||+.+.+++|++.|+++.++|+ .....+..+-+.+|++++|
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTG---Dn~~TA~aIA~elGId~v~ 488 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITG---DNPLTAAAIAAEAGVDDFL 488 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCcEEE
Confidence 5799999999999999999999999 5688999999999998754
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00045 Score=74.39 Aligned_cols=46 Identities=24% Similarity=0.476 Sum_probs=41.6
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccch
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK 231 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~ 231 (371)
-+++|++.+.|++|++.|++++++|+ ..+..++.+-+++|+++++.
T Consensus 536 D~~R~~a~~aI~~L~~~Gi~~~mLTG---Dn~~~A~~iA~~lGId~v~A 581 (713)
T COG2217 536 DELRPDAKEAIAALKALGIKVVMLTG---DNRRTAEAIAKELGIDEVRA 581 (713)
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcChHhhec
Confidence 45899999999999999999999999 66899999999999987654
|
|
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00033 Score=61.71 Aligned_cols=52 Identities=17% Similarity=0.248 Sum_probs=43.1
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcc-ccchheeecc
Q 017455 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE-RISKIKIVGN 237 (371)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~-~~f~~~i~~~ 237 (371)
.+.++||+.++|+.|++. +.++|+|++ ...++..+++.+++. .+|...+++.
T Consensus 56 ~v~~rPgv~efL~~l~~~-yel~I~T~~---~~~yA~~vl~~ldp~~~~F~~ri~~r 108 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKL-YEMHVYTMG---TRAYAQAIAKLIDPDGKYFGDRIISR 108 (156)
T ss_pred EEEECCCHHHHHHHHHhh-cEEEEEeCC---cHHHHHHHHHHhCcCCCeeccEEEEe
Confidence 356899999999999965 999999995 489999999999998 5785445544
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0018 Score=57.02 Aligned_cols=40 Identities=20% Similarity=0.285 Sum_probs=30.2
Q ss_pred CCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHc
Q 017455 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL 224 (371)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~l 224 (371)
.+|||.++...++++||++..+|+........++..+...
T Consensus 28 ~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~ 67 (157)
T PF08235_consen 28 THPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQH 67 (157)
T ss_pred hhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHH
Confidence 5789999999999999999999995533344455555544
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3 | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.00072 Score=69.21 Aligned_cols=126 Identities=10% Similarity=0.088 Sum_probs=71.3
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHc---------CccccchheeecchhHHhhhhc------c
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL---------GSERISKIKIVGNEEVERSLYG------Q 247 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~l---------gl~~~f~~~i~~~~~~~~~~f~------~ 247 (371)
+..-|.+..+|+.||++|-++-++|| |+-.++..+++.+ .+.++||++|+.+.-= .+|. .
T Consensus 182 i~k~~~l~~~L~~lr~~GKklFLiTN---S~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP--~FF~~~~pfr~ 256 (448)
T PF05761_consen 182 IHKDPKLPPWLERLRSAGKKLFLITN---SPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKP--GFFTEGRPFRE 256 (448)
T ss_dssp EE--CHHHHHHHHHHCCT-EEEEE-S---S-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CC--HHHCT---EEE
T ss_pred ccCCchHHHHHHHHHhcCceEEEecC---CCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCC--cccCCCCceEE
Confidence 44578999999999999999999999 5578888888754 3668999988865411 1121 1
Q ss_pred ccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCH
Q 017455 248 FVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ 327 (371)
Q Consensus 248 ~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~ 327 (371)
+.+..+...... .++..++. .+|. ... .....+.+|....++++|||+.
T Consensus 257 vd~~~g~l~~~~---------------------~~~~l~~g-~vY~-gGn--------~~~l~~ll~~~g~~VLY~GDhi 305 (448)
T PF05761_consen 257 VDTETGKLKWGK---------------------YVGPLEKG-KVYS-GGN--------WDQLHKLLGWRGKEVLYFGDHI 305 (448)
T ss_dssp EETTTSSEECS------------------------SS--TC--EEE-E----------HHHHHHHCT--GGGEEEEESST
T ss_pred EECCCCcccccc---------------------ccccccCC-CEee-cCC--------HHHHHHHHccCCCeEEEECCch
Confidence 111111100000 00000111 0100 000 5666788899999999999997
Q ss_pred h-hHHHHHHc-CCcEEEEC
Q 017455 328 S-GVAGAQRI-GMPCVVMR 344 (371)
Q Consensus 328 ~-Di~aA~~a-Gm~~v~v~ 344 (371)
. ||...+.. |+.|++|-
T Consensus 306 ~~Di~~~k~~~gWrT~~Ii 324 (448)
T PF05761_consen 306 YGDILKSKKRHGWRTAAII 324 (448)
T ss_dssp TTTHHHHHHHH-SEEEEE-
T ss_pred hhhhhhhccccceEEEEEe
Confidence 4 98887777 99999985
|
1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A .... |
| >COG5663 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0023 Score=56.57 Aligned_cols=37 Identities=14% Similarity=0.217 Sum_probs=30.4
Q ss_pred HHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCcEEEECCCCCC
Q 017455 309 GAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCIT 349 (371)
Q Consensus 309 a~~~lgv~p~e~I~IgDs~-~Di~aA~~aGm~~v~v~~~~~~ 349 (371)
+.+..+++ +|++|+. +-++.|+.+|++++++++++..
T Consensus 129 ~vrth~id----lf~ed~~~na~~iAk~~~~~vilins~ynR 166 (194)
T COG5663 129 AVRTHNID----LFFEDSHDNAGQIAKNAGIPVILINSPYNR 166 (194)
T ss_pred hhHhhccC----ccccccCchHHHHHHhcCCcEEEecCcccc
Confidence 35667777 8999996 4678888899999999988764
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0011 Score=73.70 Aligned_cols=42 Identities=17% Similarity=0.332 Sum_probs=38.5
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcc
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~ 227 (371)
-+++|++.+.|+.|+++|+++.++|+ .....+..+.+.+|+.
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTG---D~~~tA~~IA~~lGI~ 590 (902)
T PRK10517 549 DPPKETTAPALKALKASGVTVKILTG---DSELVAAKVCHEVGLD 590 (902)
T ss_pred CcchhhHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCC
Confidence 36899999999999999999999999 5588899999999995
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0057 Score=49.80 Aligned_cols=50 Identities=20% Similarity=0.229 Sum_probs=36.9
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchh
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI 232 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~ 232 (371)
..+.||+.++|+.|+++|.+++++||.+..........++.+|+.--.+.
T Consensus 13 ~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~ 62 (101)
T PF13344_consen 13 NEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDE 62 (101)
T ss_dssp TEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGG
T ss_pred CCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCE
Confidence 34899999999999999999999999875554566666788998743343
|
... |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0015 Score=72.35 Aligned_cols=41 Identities=17% Similarity=0.463 Sum_probs=38.0
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcc
Q 017455 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~ 227 (371)
+++|++.+.|+.|+++|+++.++|+ .....+..+-+.+|+.
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTG---D~~~tA~aIA~~lGI~ 555 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTG---DNEIVTARICQEVGID 555 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCC
Confidence 6899999999999999999999999 5578899999999996
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0027 Score=70.74 Aligned_cols=121 Identities=18% Similarity=0.244 Sum_probs=74.9
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccch-heeecchhHHhhhhccccccccccCCchhH
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK-IKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~-~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~ 261 (371)
-||+|++.+.|+.|+++|+++.++|+ .....+..+-+.+|+..--. ..++.+.+.. .-.++.
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTG---D~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~--------------~l~~~e 608 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITG---DHVETAIAIAKECGIEAEAESALVIDGAELD--------------ALSDEE 608 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECC---CCHHHHHHHHHHcCCCCCCCceeEeehHHhh--------------hcCHHH
Confidence 57999999999999999999999999 66888999999999854321 1122222221 111110
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 017455 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (371)
Q Consensus 262 ~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v 341 (371)
+. +.+. +-+ -++.=+|+-+-.+ -.++++.| .-+.|.||+.||+.|.++|.+-..
T Consensus 609 l~---------------~~~~---~~~-VfARvsP~qK~~I----V~~lq~~g---~vVamtGDGvNDapALk~ADVGIa 662 (917)
T COG0474 609 LA---------------ELVE---ELS-VFARVSPEQKARI----VEALQKSG---HVVAMTGDGVNDAPALKAADVGIA 662 (917)
T ss_pred HH---------------HHhh---hCc-EEEEcCHHHHHHH----HHHHHhCC---CEEEEeCCCchhHHHHHhcCccEE
Confidence 00 0000 000 1111122222223 33344544 568999999999999999999887
Q ss_pred EECCC
Q 017455 342 VMRSR 346 (371)
Q Consensus 342 ~v~~~ 346 (371)
+...|
T Consensus 663 mg~~G 667 (917)
T COG0474 663 MGGEG 667 (917)
T ss_pred ecccH
Confidence 76543
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0022 Score=71.35 Aligned_cols=41 Identities=17% Similarity=0.343 Sum_probs=38.1
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcc
Q 017455 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~ 227 (371)
+++|++.+.|+.|+++|+++.++|+ .....+..+-+.+|+.
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTG---D~~~tA~aIA~~lGI~ 590 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTG---DNPIVTAKICREVGLE 590 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCC
Confidence 7999999999999999999999999 5578899999999995
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0029 Score=69.10 Aligned_cols=42 Identities=21% Similarity=0.358 Sum_probs=38.8
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccc
Q 017455 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~ 228 (371)
+++|++.+.|+.|++.|+++.++|+ .....+..+-+.+|+.+
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTG---D~~~tA~~IA~~lGI~~ 483 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTG---DHLAIAKETARRLGLGT 483 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCCC
Confidence 7999999999999999999999999 55888999999999964
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0062 Score=68.95 Aligned_cols=42 Identities=19% Similarity=0.365 Sum_probs=37.9
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcc
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~ 227 (371)
-+++|++.+.|+.|+++|+++.++|+ .....+..+.+.+|+.
T Consensus 655 d~lr~~~~~~I~~l~~agi~v~miTG---D~~~TA~~iA~~~gii 696 (1054)
T TIGR01657 655 NPLKPDTKEVIKELKRASIRTVMITG---DNPLTAVHVARECGIV 696 (1054)
T ss_pred cCCCccHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCC
Confidence 36999999999999999999999999 5578888889999994
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0035 Score=70.77 Aligned_cols=42 Identities=21% Similarity=0.310 Sum_probs=38.5
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcc
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~ 227 (371)
-+++|++.+.|+.|+++|+++.++|+ .....+..+.+.+|+.
T Consensus 645 Dp~r~~v~~aI~~l~~aGIkv~MiTG---D~~~tA~~iA~~~Gi~ 686 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQAGINVHMLTG---DFPETAKAIAQEVGII 686 (1053)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECC---CCHHHHHHHHHHcCCC
Confidence 37999999999999999999999999 5578899999999995
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >COG4996 Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0032 Score=53.51 Aligned_cols=50 Identities=18% Similarity=0.098 Sum_probs=43.6
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchhee
Q 017455 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKI 234 (371)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i 234 (371)
.+.++|.|++++..+|+.|+-+...|= +..+.+-..+..+++..+|...+
T Consensus 39 ev~L~~~v~~~l~warnsG~i~~~~sW---N~~~kA~~aLral~~~~yFhy~V 88 (164)
T COG4996 39 EVHLFPDVKETLKWARNSGYILGLASW---NFEDKAIKALRALDLLQYFHYIV 88 (164)
T ss_pred EEEEcHHHHHHHHHHHhCCcEEEEeec---CchHHHHHHHHHhchhhhEEEEE
Confidence 356999999999999999999888886 56778888899999999998754
|
|
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.016 Score=54.18 Aligned_cols=48 Identities=10% Similarity=0.217 Sum_probs=37.1
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEcCCCCCC-cHHHHHHHHHcCcccc
Q 017455 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSG-DRIARSVVEKLGSERI 229 (371)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~-~~~~~~~l~~lgl~~~ 229 (371)
..++.||+.+|++..-++|.+|..+||..... ......-+.++|+...
T Consensus 120 ~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~ 168 (274)
T COG2503 120 KSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQV 168 (274)
T ss_pred ccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccc
Confidence 46689999999999999999999999976332 3345555677777653
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.0049 Score=68.96 Aligned_cols=42 Identities=29% Similarity=0.512 Sum_probs=38.5
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccc
Q 017455 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~ 228 (371)
+++|++.+.|+.|+++|+++.++|+ .....+..+-+.+|+..
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTG---D~~~tA~~iA~~~GI~~ 620 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTG---DNIDTAKAIARNCGILT 620 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECC---CChHHHHHHHHHcCCCC
Confidence 7999999999999999999999999 55788999999999963
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.0095 Score=64.71 Aligned_cols=44 Identities=30% Similarity=0.496 Sum_probs=39.4
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcccc
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~ 229 (371)
-+++||+...+..|++.|++++++|+ ..+..++++.+.+|++..
T Consensus 722 D~vr~~a~~av~~Lk~~Gi~v~mLTG---Dn~~aA~svA~~VGi~~V 765 (951)
T KOG0207|consen 722 DQVRPDAALAVAELKSMGIKVVMLTG---DNDAAARSVAQQVGIDNV 765 (951)
T ss_pred cccchhHHHHHHHHHhcCceEEEEcC---CCHHHHHHHHHhhCcceE
Confidence 35899999999999999999999999 668999999999996653
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.012 Score=66.23 Aligned_cols=42 Identities=26% Similarity=0.401 Sum_probs=37.6
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcc
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~ 227 (371)
-+|+|++.+.|+.++++|+++.++|+ .....+..+.+.+|+.
T Consensus 567 Dplr~~v~~aI~~l~~~Gi~v~~~TG---d~~~ta~~ia~~~gi~ 608 (997)
T TIGR01106 567 DPPRAAVPDAVGKCRSAGIKVIMVTG---DHPITAKAIAKGVGII 608 (997)
T ss_pred CCChHHHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCC
Confidence 37899999999999999999999999 4477888899999984
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.0058 Score=55.30 Aligned_cols=37 Identities=14% Similarity=0.050 Sum_probs=34.6
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
++.+++++|++++++++|||+.+|+.+++.+|+.+++
T Consensus 168 ~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 168 LQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred HHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 8999999999999999999999999999999998753
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.014 Score=66.17 Aligned_cols=42 Identities=21% Similarity=0.177 Sum_probs=36.6
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcc
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~ 227 (371)
-+++|||.+.|+.|+++|+++.++|+ .....+..+....|+-
T Consensus 630 D~lq~~v~etI~~L~~AGIkv~mlTG---D~~~TA~~IA~~~~ii 671 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQAGIKIWVLTG---DKVETAINIGYSCRLL 671 (1057)
T ss_pred hhhhhccHHHHHHHHHCCCeEEEEcC---CcHHHHHHHHHHhCCC
Confidence 36999999999999999999999999 4567778888888874
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.0077 Score=55.12 Aligned_cols=40 Identities=13% Similarity=0.137 Sum_probs=36.3
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEC
Q 017455 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 344 (371)
Q Consensus 305 ~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~ 344 (371)
|++..++.+|++++++++|||+.||+.|.+.+|..+++=+
T Consensus 190 ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~n 229 (254)
T PF08282_consen 190 AIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGN 229 (254)
T ss_dssp HHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETT
T ss_pred HHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcC
Confidence 4789999999999999999999999999999999866643
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.013 Score=55.00 Aligned_cols=41 Identities=7% Similarity=-0.070 Sum_probs=37.1
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHc-------CCcEEEECCC
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI-------GMPCVVMRSR 346 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~a-------Gm~~v~v~~~ 346 (371)
++.++++++.+++++++|||+.+|+.+++.+ |..+|.+..+
T Consensus 172 ~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g 219 (244)
T TIGR00685 172 VKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSG 219 (244)
T ss_pred HHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecC
Confidence 8899999999999999999999999999999 7788888644
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.037 Score=56.09 Aligned_cols=104 Identities=11% Similarity=0.094 Sum_probs=77.7
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHH
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~ 262 (371)
+-+.-...++.+.+.+.|-+|+++|..- -+....+.++...|.+-.--.+..|+++...
T Consensus 98 Lypn~~~~eL~e~ai~n~krVIlISDMY-lps~Il~~~L~s~g~d~~nipiY~S~e~rl~-------------------- 156 (635)
T COG5610 98 LYPNKKNIELVEEAIKNEKRVILISDMY-LPSSILRTFLNSFGPDFNNIPIYMSSEFRLK-------------------- 156 (635)
T ss_pred eeccccchHHHHHHHhCCCeEEEEeccc-CcHHHHHHHHHhcCCCccCceeeecceeehh--------------------
Confidence 3344556789999999999999999865 4567788888888876443323333333211
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHh-hHHHHHHcCCcEE
Q 017455 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQS-GVAGAQRIGMPCV 341 (371)
Q Consensus 263 ~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~-Di~aA~~aGm~~v 341 (371)
|-+-.+ |.+++...+++|.+.+++||..+ |+..++..|+.|.
T Consensus 157 -----------------------KnSg~L--------------Fk~Vlk~EnVd~~~w~H~GDN~~aD~l~pk~LgI~Tl 199 (635)
T COG5610 157 -----------------------KNSGNL--------------FKAVLKLENVDPKKWIHCGDNWVADYLKPKNLGISTL 199 (635)
T ss_pred -----------------------cccchH--------------HHHHHhhcCCChhheEEecCchhhhhcCccccchhHH
Confidence 333444 89999999999999999999975 9999999999987
Q ss_pred EEC
Q 017455 342 VMR 344 (371)
Q Consensus 342 ~v~ 344 (371)
+.-
T Consensus 200 f~~ 202 (635)
T COG5610 200 FYI 202 (635)
T ss_pred HHH
Confidence 753
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.061 Score=51.52 Aligned_cols=45 Identities=16% Similarity=0.258 Sum_probs=33.9
Q ss_pred CCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcccc
Q 017455 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229 (371)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~ 229 (371)
+.||+.++|+.|+++|++++++||.+..........+.++|+...
T Consensus 19 ~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~ 63 (279)
T TIGR01452 19 VVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGL 63 (279)
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 678999999999999999999999542223333355677887543
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PLN02499 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.07 Score=55.13 Aligned_cols=34 Identities=9% Similarity=0.045 Sum_probs=27.7
Q ss_pred HHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHH-cCcccc
Q 017455 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERI 229 (371)
Q Consensus 192 lL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~-lgl~~~ 229 (371)
.++..+..| +++|+|. +++..++..++. +|.+..
T Consensus 101 ~~~~~~~~g-~~vVVTA---sPrvmVEpFake~LG~D~V 135 (498)
T PLN02499 101 AWKVFSSCD-KRVVVTR---MPRVMVERFAKEHLRADEV 135 (498)
T ss_pred HHHHHHcCC-eEEEEeC---CHHHHHHHHHHHhcCCceE
Confidence 455667778 9999999 779999999998 888763
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.0083 Score=55.78 Aligned_cols=37 Identities=16% Similarity=0.101 Sum_probs=34.2
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
++.+++++|++++++++|||+.||+.|++.+|...++
T Consensus 164 l~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav 200 (236)
T TIGR02471 164 LRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVV 200 (236)
T ss_pred HHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEE
Confidence 8999999999999999999999999999999876654
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.64 Score=43.47 Aligned_cols=41 Identities=22% Similarity=0.322 Sum_probs=32.7
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCc
Q 017455 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 226 (371)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl 226 (371)
..++.||+.+.+..|.++ ++-+|+|. +...+++++...+|+
T Consensus 81 sa~lvPgA~etm~~l~~~-~tp~v~ST---SY~qy~~r~a~~ig~ 121 (315)
T COG4030 81 SAKLVPGAEETMATLQER-WTPVVIST---SYTQYLRRTASMIGV 121 (315)
T ss_pred hcccCCChHHHHHHHhcc-CCceEEec---cHHHHHHHHHHhcCC
Confidence 477999999999999887 55556665 457888888888887
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.04 Score=62.97 Aligned_cols=41 Identities=24% Similarity=0.268 Sum_probs=34.4
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCc
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 226 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl 226 (371)
-++++|+.+.|+.|+++|+++.++|+ .....+..+-...|+
T Consensus 725 D~lr~~v~~~I~~l~~agi~v~mlTG---D~~~tAi~IA~s~~L 765 (1178)
T PLN03190 725 DKLQQGVPEAIESLRTAGIKVWVLTG---DKQETAISIGYSSKL 765 (1178)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECC---CCHHHHHHHHHHhCC
Confidence 37999999999999999999999999 445666677666666
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.14 Score=48.36 Aligned_cols=53 Identities=13% Similarity=0.209 Sum_probs=40.9
Q ss_pred CCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecc
Q 017455 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (371)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~ 237 (371)
+.||+.++|+.|+++|++++++||.+..........++.+|++...+.++.++
T Consensus 18 ~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~ 70 (249)
T TIGR01457 18 RIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTAS 70 (249)
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHH
Confidence 56799999999999999999999955344566677788899876555544443
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.014 Score=54.94 Aligned_cols=41 Identities=15% Similarity=0.169 Sum_probs=37.3
Q ss_pred HHHHHHHHcCCC--CCcEEEEeCCHhhHHHHHHcCCcEEEECC
Q 017455 305 ALRAGAEYAEKP--VRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (371)
Q Consensus 305 ~~~~a~~~lgv~--p~e~I~IgDs~~Di~aA~~aGm~~v~v~~ 345 (371)
|++.+++++|++ .+++++|||+.||+.|.+.+|..+++-+.
T Consensus 180 ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na 222 (256)
T TIGR01486 180 AANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGP 222 (256)
T ss_pred HHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCC
Confidence 378899999999 99999999999999999999998887653
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.047 Score=59.08 Aligned_cols=123 Identities=18% Similarity=0.194 Sum_probs=73.8
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHH
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~ 262 (371)
-||||+|.+.++.+++.|++|..+|+ .....+..+-.++|+-..-+. + -....+|+....=.++++
T Consensus 583 DPPR~ev~~ai~~c~~aGIrV~mITG---D~~~TA~AI~r~iGi~~~~ed-------~----~~~~~TG~efD~ls~~~~ 648 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAGIRVIMITG---DNKETAEAIAREIGIFSEDED-------V----SSMALTGSEFDDLSDEEL 648 (972)
T ss_pred CCCchhHHHHHHHHHHcCCEEEEEcC---CCHHHHHHHHHHhCCCcCCcc-------c----cccccchhhhhcCCHHHH
Confidence 47999999999999999999999999 557889999999997432221 0 011233333322111111
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhccCccccC-CCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 017455 263 ATEARKAVSAQKQEIAEEVASMLKLSVDID-TSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (371)
Q Consensus 263 ~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~-~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v 341 (371)
. ..+..+.++ .-.|+-+-+|| .++++.| +=+-|-||+.||-.|.+.|.+...
T Consensus 649 ~--------------------~~~~~~~vFaR~~P~HK~kIV----eaLq~~g---eivAMTGDGVNDApALK~AdIGIA 701 (972)
T KOG0202|consen 649 D--------------------DAVRRVLVFARAEPQHKLKIV----EALQSRG---EVVAMTGDGVNDAPALKKADIGIA 701 (972)
T ss_pred H--------------------HHhhcceEEEecCchhHHHHH----HHHHhcC---CEEEecCCCccchhhhhhccccee
Confidence 1 001111111 11222223332 2344444 667899999999999999988766
Q ss_pred EECCC
Q 017455 342 VMRSR 346 (371)
Q Consensus 342 ~v~~~ 346 (371)
+=.+|
T Consensus 702 MG~~G 706 (972)
T KOG0202|consen 702 MGISG 706 (972)
T ss_pred ecCCc
Confidence 64333
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.041 Score=62.02 Aligned_cols=66 Identities=20% Similarity=0.244 Sum_probs=44.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhc-CCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCc
Q 017455 158 EKKAFVKNVLQEKKNALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 226 (371)
Q Consensus 158 ~~~~~~~~l~~~~~~~~~~~l~~-~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl 226 (371)
++++.+++..+...+.+.-+-.. =+-++..||.+.|+.|+++|+|+.++|+ ...+.+-.+-...++
T Consensus 624 ~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTG---DK~ETAiNIg~sC~L 690 (1151)
T KOG0206|consen 624 DREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTG---DKQETAINIGYSCRL 690 (1151)
T ss_pred CHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcC---cHHHHHHHHHHhhcC
Confidence 44555555555555544322211 1356899999999999999999999999 445566666655555
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.046 Score=49.96 Aligned_cols=38 Identities=16% Similarity=0.316 Sum_probs=28.1
Q ss_pred cHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccc
Q 017455 188 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (371)
Q Consensus 188 gv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~ 228 (371)
...+.|+.|+++|++++++|+. ....+..++..+++..
T Consensus 19 ~~~~al~~l~~~g~~~~i~TGR---~~~~~~~~~~~~~~~~ 56 (254)
T PF08282_consen 19 ETIEALKELQEKGIKLVIATGR---SYSSIKRLLKELGIDD 56 (254)
T ss_dssp HHHHHHHHHHHTTCEEEEECSS---THHHHHHHHHHTTHCS
T ss_pred HHHHHHHhhcccceEEEEEccC---cccccccccccccchh
Confidence 3444567778889999999994 3667788888888773
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.13 Score=53.48 Aligned_cols=40 Identities=28% Similarity=0.514 Sum_probs=36.2
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCc
Q 017455 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 226 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl 226 (371)
+++|++.+.++.|++.|+++.++|+ .....+..+-+.+|+
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltG---D~~~~a~~ia~~lgi 386 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTG---DNVLTAKAIAKELGI 386 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcCc
Confidence 7999999999999999999999999 557888888888886
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.03 Score=52.88 Aligned_cols=42 Identities=21% Similarity=0.086 Sum_probs=34.6
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEECCCC
Q 017455 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSRC 347 (371)
Q Consensus 305 ~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~~ 347 (371)
|++..++++++++++++++|||.||+.|. ..+.+.|+|.+..
T Consensus 169 Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~Na~ 210 (247)
T PF05116_consen 169 ALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGNAQ 210 (247)
T ss_dssp HHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TTS-
T ss_pred HHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcCCC
Confidence 48999999999999999999999999988 7888999998643
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.83 E-value=0.42 Score=45.23 Aligned_cols=44 Identities=23% Similarity=0.480 Sum_probs=35.3
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcc
Q 017455 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~ 227 (371)
.+.||+.++|+.|+++|++++++||.+..........+..+|+.
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 37899999999999999999999997743344455566778885
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.58 Score=44.33 Aligned_cols=49 Identities=14% Similarity=0.152 Sum_probs=38.1
Q ss_pred CCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchhe
Q 017455 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIK 233 (371)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~ 233 (371)
+.||+.++|+.|+++|++++++||.+..........+..+|+.--.+.+
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i 70 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEV 70 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHe
Confidence 6889999999999999999999997643334566778888986333443
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=93.92 E-value=0.048 Score=51.32 Aligned_cols=37 Identities=5% Similarity=-0.046 Sum_probs=31.7
Q ss_pred HHHHHHHHcCCCCCcEEEEeC----CHhhHHHHHHcCCcEEEECC
Q 017455 305 ALRAGAEYAEKPVRNCFLIAG----SQSGVAGAQRIGMPCVVMRS 345 (371)
Q Consensus 305 ~~~~a~~~lgv~p~e~I~IgD----s~~Di~aA~~aGm~~v~v~~ 345 (371)
|++..+++ ++++++||| +.||++|.+.+|...+.|.+
T Consensus 192 al~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n 232 (247)
T PTZ00174 192 CLRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKN 232 (247)
T ss_pred HHHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCC
Confidence 36777777 699999999 89999999999998888873
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.83 E-value=0.11 Score=49.54 Aligned_cols=43 Identities=19% Similarity=0.108 Sum_probs=35.5
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHc---CCcEEEECCCC
Q 017455 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI---GMPCVVMRSRC 347 (371)
Q Consensus 305 ~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~a---Gm~~v~v~~~~ 347 (371)
|++.+++.+|++.+++++|||..+|+.|.+.+ |-..|.|..+.
T Consensus 178 al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a~ 223 (266)
T PRK10187 178 AIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTGA 223 (266)
T ss_pred HHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCCC
Confidence 48899999999999999999999999998888 34556665543
|
|
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=93.77 E-value=0.033 Score=48.51 Aligned_cols=48 Identities=19% Similarity=0.504 Sum_probs=37.5
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCc-cccchhee
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS-ERISKIKI 234 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl-~~~f~~~i 234 (371)
+.+|||+.+||+.+.+. +.++|.|.+. ..++..+++.++. ..+|..++
T Consensus 35 v~~RP~l~~FL~~l~~~-~ev~i~T~~~---~~ya~~v~~~ldp~~~~~~~~~ 83 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKH-YEVVIWTSAS---EEYAEPVLDALDPNGKLFSRRL 83 (159)
T ss_dssp EEE-TTHHHHHHHHHHH-CEEEEE-SS----HHHHHHHHHHHTTTTSSEEEEE
T ss_pred EeeCchHHHHHHHHHHh-ceEEEEEeeh---hhhhhHHHHhhhhhcccccccc
Confidence 45899999999999665 9999999954 8999999999988 46676543
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.53 E-value=0.68 Score=40.65 Aligned_cols=37 Identities=11% Similarity=0.079 Sum_probs=32.7
Q ss_pred CCCCcEEEEeCCH-hhHHHHHHcCCcEEEECCCCCCCc
Q 017455 315 KPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCITTL 351 (371)
Q Consensus 315 v~p~e~I~IgDs~-~Di~aA~~aGm~~v~v~~~~~~~~ 351 (371)
..++|.+||||.. .||-.|...|...||++.+....+
T Consensus 137 ~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~~~~ 174 (190)
T KOG2961|consen 137 CTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVRAEE 174 (190)
T ss_pred CChhHeEEEccchhhhHhhhhhccceeEEecccccccc
Confidence 7899999999997 699999999999999998765443
|
|
| >KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.27 E-value=0.17 Score=49.85 Aligned_cols=128 Identities=14% Similarity=0.090 Sum_probs=72.8
Q ss_pred CCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHc---CccccchheeecchhHHhhhhccccccccccCCchhH
Q 017455 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL---GSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (371)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~l---gl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~ 261 (371)
-.|....+++.|+++|-++-++|| ++..++...+..+ .+.++||++|+-.+.-. +| +.+...--+-+.
T Consensus 241 r~~ql~~fl~kL~~~GKklFLiTN---SPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~--Ff----tde~rPfR~~de 311 (510)
T KOG2470|consen 241 RNPQLLAFLRKLKDHGKKLFLITN---SPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPE--FF----TDERRPFRKYDE 311 (510)
T ss_pred ccHHHHHHHHHHHHhcCcEEEEeC---CchhhhhcCceeeeCccHHhhhheeEEecCCCc--cc----ccccCcchhhcc
Confidence 356778899999999999999999 4555565555533 35689999877543211 01 110000000000
Q ss_pred H--HHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHH-HcC
Q 017455 262 L--ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQ-RIG 337 (371)
Q Consensus 262 ~--~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~-~Di~aA~-~aG 337 (371)
. +--=+|...-+|.+|+ | +.. +...++.-|-.-.+++++||+. +|+.... ++|
T Consensus 312 k~~sl~wdkv~klekgkiY-------------y--~G~--------l~~flelt~WrG~~VlYFGDHlySDLad~tlkhg 368 (510)
T KOG2470|consen 312 KRGSLLWDKVDKLEKGKIY-------------Y--QGN--------LKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHG 368 (510)
T ss_pred cccchhhhhhhhcccCcee-------------e--ecc--------HHHHHHHhccCCCeeEEecCcchhhhhhhHhhcc
Confidence 0 0000222222222221 0 000 3444566677788999999997 6988877 899
Q ss_pred CcEEEEC
Q 017455 338 MPCVVMR 344 (371)
Q Consensus 338 m~~v~v~ 344 (371)
+++-.+-
T Consensus 369 WRTgAII 375 (510)
T KOG2470|consen 369 WRTGAII 375 (510)
T ss_pred cccccch
Confidence 9876653
|
|
| >KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.77 E-value=0.3 Score=51.64 Aligned_cols=28 Identities=21% Similarity=0.424 Sum_probs=22.4
Q ss_pred ceEEEEecCCccccccccCcHHHHHHHHHHcCCC
Q 017455 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLD 117 (371)
Q Consensus 84 ~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~ 117 (371)
-|.||=|+||||+.++.+ -+++...|.+
T Consensus 530 ~kIVISDIDGTITKSDvL------Gh~lp~iGkD 557 (738)
T KOG2116|consen 530 DKIVISDIDGTITKSDVL------GHVLPMIGKD 557 (738)
T ss_pred CcEEEecCCCceEhhhhh------hhhhhhhcCc
Confidence 579999999999988866 4566667776
|
|
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=92.65 E-value=0.57 Score=42.86 Aligned_cols=39 Identities=21% Similarity=0.422 Sum_probs=34.7
Q ss_pred CCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcc
Q 017455 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (371)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~ 227 (371)
.||++.+||+.+.+ .+.|+|.|.+. ..++..++..+|+.
T Consensus 46 kRP~l~eFL~~~~~-~feIvVwTAa~---~~ya~~~l~~l~~~ 84 (195)
T TIGR02245 46 MRPYLHEFLTSAYE-DYDIVIWSATS---MKWIEIKMTELGVL 84 (195)
T ss_pred eCCCHHHHHHHHHh-CCEEEEEecCC---HHHHHHHHHHhccc
Confidence 69999999999998 59999999954 78999999998864
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.55 E-value=0.21 Score=51.67 Aligned_cols=43 Identities=16% Similarity=0.394 Sum_probs=37.9
Q ss_pred CCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccc
Q 017455 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (371)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f 230 (371)
..||++|-..+||+-|++++.+|+ ...-.+..+....|++++.
T Consensus 448 vK~Gi~ERf~elR~MgIkTvM~TG---DN~~TAa~IA~EAGVDdfi 490 (681)
T COG2216 448 VKPGIKERFAELRKMGIKTVMITG---DNPLTAAAIAAEAGVDDFI 490 (681)
T ss_pred cchhHHHHHHHHHhcCCeEEEEeC---CCHHHHHHHHHHhCchhhh
Confidence 579999999999999999999999 4567788888899999864
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.49 E-value=0.27 Score=46.88 Aligned_cols=33 Identities=3% Similarity=-0.081 Sum_probs=20.0
Q ss_pred ccHHHHHHHHHH-CCCcEEEEcCCCCCCcHHHHHHHH
Q 017455 187 PGVEDFVDDAYN-EGIPLIVLTAYGKSGDRIARSVVE 222 (371)
Q Consensus 187 pgv~elL~~L~~-~Gi~v~IvTn~~~~~~~~~~~~l~ 222 (371)
|.+.+.|+.|++ .|++++|+|+.. ...+...+.
T Consensus 39 ~~~~~~L~~L~~~~g~~v~i~SGR~---~~~~~~~~~ 72 (266)
T PRK10187 39 DNILQGLQLLATANDGALALISGRS---MVELDALAK 72 (266)
T ss_pred HHHHHHHHHHHhCCCCcEEEEeCCC---HHHHHHhcC
Confidence 445556667776 588888888843 344444443
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=91.84 E-value=1.6 Score=40.71 Aligned_cols=51 Identities=22% Similarity=0.330 Sum_probs=36.4
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEcCCC-CCCcHHHHHHHHHcCccccchhee
Q 017455 184 PLRPGVEDFVDDAYNEGIPLIVLTAYG-KSGDRIARSVVEKLGSERISKIKI 234 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~IvTn~~-~~~~~~~~~~l~~lgl~~~f~~~i 234 (371)
.++||+.++|..++++|+++.++||.+ ++.......+.+.+|+.-..+.++
T Consensus 14 ~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~ii 65 (236)
T TIGR01460 14 KPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQII 65 (236)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHee
Confidence 478999999999999999999999977 333344444444478764444433
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=91.76 E-value=0.14 Score=48.16 Aligned_cols=36 Identities=6% Similarity=-0.041 Sum_probs=31.3
Q ss_pred HHHcCCCCCcEEEEeC----CHhhHHHHHHcCCcEEEECCC
Q 017455 310 AEYAEKPVRNCFLIAG----SQSGVAGAQRIGMPCVVMRSR 346 (371)
Q Consensus 310 ~~~lgv~p~e~I~IgD----s~~Di~aA~~aGm~~v~v~~~ 346 (371)
++.+. +++++++||| +.||++|.+.-|..++-|+++
T Consensus 194 l~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~ 233 (245)
T PLN02423 194 LQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSP 233 (245)
T ss_pred HHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCH
Confidence 44444 9999999999 799999999999999999865
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=91.04 E-value=0.56 Score=38.01 Aligned_cols=31 Identities=23% Similarity=0.252 Sum_probs=20.3
Q ss_pred EEEecCCcccccccc-CcHHHHHHHHHHcCCC
Q 017455 87 VLLEVDGVLVDAYRF-GNRQAFNVAFQKLGLD 117 (371)
Q Consensus 87 viFD~DGTL~d~~~~-~~~~a~~~~~~~~g~~ 117 (371)
++||+||||+..... .-...+-+.+++.|.+
T Consensus 1 ~l~D~dGvl~~g~~~ipga~e~l~~L~~~g~~ 32 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPGAVEALDALRERGKP 32 (101)
T ss_dssp EEEESTTTSEETTEE-TTHHHHHHHHHHTTSE
T ss_pred CEEeCccEeEeCCCcCcCHHHHHHHHHHcCCC
Confidence 689999999986543 2234444556666764
|
... |
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=90.46 E-value=0.29 Score=46.28 Aligned_cols=60 Identities=30% Similarity=0.539 Sum_probs=39.9
Q ss_pred HHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecc
Q 017455 174 LDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (371)
Q Consensus 174 ~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~ 237 (371)
+.+.+....+.+|+|+.++++.|.++++|+.|+|+ +....+..++++.|... -...|+|+
T Consensus 80 i~~~V~~s~i~LRdg~~~~f~~L~~~~IP~lIFSA---GlgdvI~~vL~q~~~~~-~Nv~VvSN 139 (246)
T PF05822_consen 80 IEEAVKESDIMLRDGVEEFFDKLEEHNIPLLIFSA---GLGDVIEEVLRQAGVFH-PNVKVVSN 139 (246)
T ss_dssp HHHHHHCS---B-BTHHHHHHHHHCTT--EEEEEE---EEHHHHHHHHHHTT--B-TTEEEEEE
T ss_pred HHHHHHhcchhhhcCHHHHHHHHHhcCCCEEEEeC---CcHHHHHHHHHHcCCCC-CCeEEEee
Confidence 44445455688999999999999999999999999 55788999999886532 23445554
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=89.47 E-value=0.37 Score=40.27 Aligned_cols=14 Identities=43% Similarity=0.757 Sum_probs=12.5
Q ss_pred eEEEEecCCccccc
Q 017455 85 LAVLLEVDGVLVDA 98 (371)
Q Consensus 85 kaviFD~DGTL~d~ 98 (371)
|+++||+||||++.
T Consensus 1 k~~~~D~dgtL~~~ 14 (132)
T TIGR01662 1 KGVVLDLDGTLTDD 14 (132)
T ss_pred CEEEEeCCCceecC
Confidence 68999999999963
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=88.65 E-value=0.26 Score=41.91 Aligned_cols=26 Identities=8% Similarity=0.045 Sum_probs=21.0
Q ss_pred CCccHHHHHHHHHHCCCcEEEEcCCC
Q 017455 185 LRPGVEDFVDDAYNEGIPLIVLTAYG 210 (371)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~IvTn~~ 210 (371)
+.+++.+.|+.++++|+.++++|+..
T Consensus 25 ~~~~~ie~L~~l~~~G~~IiiaTGR~ 50 (126)
T TIGR01689 25 PILAVIEKLRHYKALGFEIVISSSRN 50 (126)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 55677777888888999999999853
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.50 E-value=0.53 Score=51.23 Aligned_cols=137 Identities=12% Similarity=0.139 Sum_probs=77.6
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhH---------------------
Q 017455 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV--------------------- 240 (371)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~--------------------- 240 (371)
..|+.|+.+..|+.|.+.+++++.+|+ ...-.+-+..+.+|+.+---.++.-.++.
T Consensus 673 ~CPlK~Ds~~~I~el~~SSH~vvMITG---DnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~ 749 (1160)
T KOG0209|consen 673 SCPLKPDSKKTIKELNNSSHRVVMITG---DNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPG 749 (1160)
T ss_pred eCCCCccHHHHHHHHhccCceEEEEeC---CCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCC
Confidence 478999999999999999999999998 33444555566666632211111111110
Q ss_pred -----HhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCC-CCchhHHHHHHHHHHHHHcC
Q 017455 241 -----ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTS-SPESLDKIVAALRAGAEYAE 314 (371)
Q Consensus 241 -----~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p-~~~~~~~~~~~~~~a~~~lg 314 (371)
-...++..++|++..+- .+-+..-..-|+..+|.- +|.-++.+| .-++.+|
T Consensus 750 ~~~~~l~~~~dlcitG~~l~~l-------------------~~~~~l~~l~~hv~VfARvaP~QKE~ii----~tlK~~G 806 (1160)
T KOG0209|consen 750 KKKTLLAETHDLCITGSALDHL-------------------QATDQLRRLIPHVWVFARVAPKQKEFII----TTLKKLG 806 (1160)
T ss_pred ccchhhhhhhhhhcchhHHHHH-------------------hhhHHHHHhhhheeEEEeeChhhHHHHH----HHHHhcC
Confidence 01112333334333111 011111122344444421 222222232 2234444
Q ss_pred CCCCcEEEEeCCHhhHHHHHHcCCcEEEECCCC
Q 017455 315 KPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSRC 347 (371)
Q Consensus 315 v~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~~ 347 (371)
-.++|-||+-||+-|.+.|...+.+++.+.
T Consensus 807 ---y~TLMCGDGTNDVGALK~AhVGVALL~~~~ 836 (1160)
T KOG0209|consen 807 ---YVTLMCGDGTNDVGALKQAHVGVALLNNPE 836 (1160)
T ss_pred ---eEEEEecCCCcchhhhhhcccceehhcCCh
Confidence 568999999999999999999999988765
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.61 E-value=0.82 Score=43.91 Aligned_cols=38 Identities=16% Similarity=0.129 Sum_probs=25.8
Q ss_pred CCCceEEEEecCCcccccccc-CcHHHHHHHHHHcCCCC
Q 017455 81 PPRDLAVLLEVDGVLVDAYRF-GNRQAFNVAFQKLGLDC 118 (371)
Q Consensus 81 ~~~~kaviFD~DGTL~d~~~~-~~~~a~~~~~~~~g~~~ 118 (371)
.+.+++++||+||||++.... .-...+-+.+++.|++.
T Consensus 5 ~~~y~~~l~DlDGvl~~G~~~ipga~e~l~~L~~~g~~~ 43 (269)
T COG0647 5 MDKYDGFLFDLDGVLYRGNEAIPGAAEALKRLKAAGKPV 43 (269)
T ss_pred hhhcCEEEEcCcCceEeCCccCchHHHHHHHHHHcCCeE
Confidence 456899999999999976543 22334445566677653
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.33 E-value=5.2 Score=38.39 Aligned_cols=43 Identities=5% Similarity=-0.116 Sum_probs=31.3
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHc---CCcEEEECCCCC
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI---GMPCVVMRSRCI 348 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~a---Gm~~v~v~~~~~ 348 (371)
+..++++......-.++.||-..|=.+-..+ +-.+|.+..+.+
T Consensus 187 ~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~~~~t 232 (266)
T COG1877 187 IKYIMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVGVGST 232 (266)
T ss_pred HHHHHhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEecCCcc
Confidence 6777888877777799999998875555555 367777766644
|
|
| >KOG3128 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=86.74 E-value=1 Score=42.73 Aligned_cols=41 Identities=27% Similarity=0.399 Sum_probs=32.0
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcC
Q 017455 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLG 225 (371)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lg 225 (371)
...++.|+.++.+.|+++++|+.|.|.+ .-..+..++.+..
T Consensus 136 ~i~lReg~~~ff~~L~~~~IP~~iFSAG---igdiiEev~~q~~ 176 (298)
T KOG3128|consen 136 NIALREGYEEFFEALQAHEIPLLIFSAG---IGDIIEEVTRQKL 176 (298)
T ss_pred hHHHHHHHHHHHHHHHhCCCceEEEecc---hHHHHHHHHHHHh
Confidence 3557899999999999999999999994 3555665555443
|
|
| >PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3 | Back alignment and domain information |
|---|
Probab=86.52 E-value=5.3 Score=38.09 Aligned_cols=33 Identities=6% Similarity=-0.005 Sum_probs=26.9
Q ss_pred HHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEECCCC
Q 017455 310 AEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSRC 347 (371)
Q Consensus 310 ~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~~ 347 (371)
++.++-. ||++|....++.|. .+.+++.|..+.
T Consensus 229 L~~~~ph----IFFDDQ~~H~~~a~-~~vps~hVP~gv 261 (264)
T PF06189_consen 229 LKAFRPH----IFFDDQDGHLESAS-KVVPSGHVPYGV 261 (264)
T ss_pred HHhhCCC----EeecCchhhhhHhh-cCCCEEeccCCc
Confidence 4455443 99999999999998 899999998764
|
1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm |
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.35 E-value=5.7 Score=38.61 Aligned_cols=46 Identities=17% Similarity=0.161 Sum_probs=35.6
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccc
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~ 228 (371)
-.+.||+.++++.|++.|-.+.++||.+....+......+.+|+.+
T Consensus 37 ~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~ 82 (306)
T KOG2882|consen 37 EKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNS 82 (306)
T ss_pred CCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccc
Confidence 4589999999999999999999999976433444445566777765
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=86.29 E-value=0.37 Score=41.97 Aligned_cols=15 Identities=47% Similarity=0.698 Sum_probs=13.4
Q ss_pred ceEEEEecCCccccc
Q 017455 84 DLAVLLEVDGVLVDA 98 (371)
Q Consensus 84 ~kaviFD~DGTL~d~ 98 (371)
+|+|+||+||||++.
T Consensus 1 ~~~~~~D~Dgtl~~~ 15 (154)
T TIGR01670 1 IRLLILDVDGVLTDG 15 (154)
T ss_pred CeEEEEeCceeEEcC
Confidence 479999999999983
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=86.18 E-value=0.74 Score=43.31 Aligned_cols=31 Identities=13% Similarity=0.186 Sum_probs=20.3
Q ss_pred CCceEEE-EecCCccccccccCcHHHHHHHHHH
Q 017455 82 PRDLAVL-LEVDGVLVDAYRFGNRQAFNVAFQK 113 (371)
Q Consensus 82 ~~~kavi-FD~DGTL~d~~~~~~~~a~~~~~~~ 113 (371)
.++|+++ ||+||||++.... ..+...+++++
T Consensus 4 ~~~~~i~~~D~DGTLl~~~~~-i~~~~~~ai~~ 35 (245)
T PLN02423 4 RKPGVIALFDVDGTLTAPRKE-ATPEMLEFMKE 35 (245)
T ss_pred CccceEEEEeccCCCcCCCCc-CCHHHHHHHHH
Confidence 3566666 9999999987653 34444444443
|
|
| >KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=86.04 E-value=1.3 Score=44.38 Aligned_cols=19 Identities=21% Similarity=0.455 Sum_probs=16.3
Q ss_pred CCceEEEEecCCccccccc
Q 017455 82 PRDLAVLLEVDGVLVDAYR 100 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~ 100 (371)
..-|.+.||+||||+++..
T Consensus 73 ~~~K~i~FD~dgtlI~t~s 91 (422)
T KOG2134|consen 73 GGSKIIMFDYDGTLIDTKS 91 (422)
T ss_pred CCcceEEEecCCceeecCC
Confidence 3468999999999999876
|
|
| >KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.81 E-value=3.6 Score=35.05 Aligned_cols=67 Identities=16% Similarity=0.170 Sum_probs=46.9
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCc
Q 017455 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 258 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~ 258 (371)
-.+++++..|.+|+++|+.+++.|++.. ..++...|+.+.+...+-.. .. ...|.-+..|++..-|+
T Consensus 44 ~fY~Di~rIL~dLk~~GVtl~~ASRt~a--p~iA~q~L~~fkvk~~Gvlk--ps----~e~ft~~~~g~gsklgh 110 (144)
T KOG4549|consen 44 IFYDDIRRILVDLKKLGVTLIHASRTMA--PQIASQGLETFKVKQTGVLK--PS----LEEFTFEAVGDGSKLGH 110 (144)
T ss_pred eeccchhHHHHHHHhcCcEEEEecCCCC--HHHHHHHHHHhccCcccccc--hh----hhcCceeeecCcccchh
Confidence 3788999999999999999999999773 57888889988776443221 11 11244455566665553
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=85.38 E-value=1.6 Score=47.61 Aligned_cols=38 Identities=13% Similarity=0.059 Sum_probs=30.0
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcC--CcEEEECC
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG--MPCVVMRS 345 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aG--m~~v~v~~ 345 (371)
++.+++ +++++.+++|||+.||+.|.+.++ ..+|.+..
T Consensus 662 l~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~ 701 (726)
T PRK14501 662 VRRLLE--AGPYDFVLAIGDDTTDEDMFRALPETAITVKVGP 701 (726)
T ss_pred HHHHHh--cCCCCEEEEECCCCChHHHHHhcccCceEEEECC
Confidence 566666 788999999999999999999984 34555554
|
|
| >COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.15 E-value=2.5 Score=43.10 Aligned_cols=35 Identities=11% Similarity=0.114 Sum_probs=27.5
Q ss_pred HHHHHHHHcCCCCCcEE-EEeCCHhhHHHHHHcCCc
Q 017455 305 ALRAGAEYAEKPVRNCF-LIAGSQSGVAGAQRIGMP 339 (371)
Q Consensus 305 ~~~~a~~~lgv~p~e~I-~IgDs~~Di~aA~~aGm~ 339 (371)
||+.-++.++..++--. -||....|+.+=+.+|++
T Consensus 481 ayLndl~slf~e~~PFyAGFGNriTDvisY~~vgIp 516 (580)
T COG5083 481 AYLNDLKSLFIEFDPFYAGFGNRITDVISYSNVGIP 516 (580)
T ss_pred HHHHHHHHhhCcCChhhccccccchhheeeccccCC
Confidence 46666777777776544 589999999999999996
|
|
| >TIGR01658 EYA-cons_domain eyes absent protein conserved domain | Back alignment and domain information |
|---|
Probab=84.60 E-value=5 Score=38.04 Aligned_cols=48 Identities=15% Similarity=0.063 Sum_probs=40.8
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEECCCCCCCccc
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSRCITTLPV 353 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l 353 (371)
|+.+.+++|-+...-++|||+..-=.||+..+|+++-+.........+
T Consensus 219 Fe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wPFw~I~~h~Dl~~l~ 266 (274)
T TIGR01658 219 FKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWPFVKIDLHPDSSHRF 266 (274)
T ss_pred HHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCCeEEeecCCCHHHhC
Confidence 999999999888889999999999999999999999997544433333
|
This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=83.92 E-value=0.57 Score=42.01 Aligned_cols=16 Identities=31% Similarity=0.484 Sum_probs=14.6
Q ss_pred CceEEEEecCCccccc
Q 017455 83 RDLAVLLEVDGVLVDA 98 (371)
Q Consensus 83 ~~kaviFD~DGTL~d~ 98 (371)
.+|+|+||+||||++.
T Consensus 20 ~ikli~~D~Dgtl~~~ 35 (183)
T PRK09484 20 NIRLLICDVDGVFSDG 35 (183)
T ss_pred CceEEEEcCCeeeecC
Confidence 4899999999999985
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=83.91 E-value=1.1 Score=42.08 Aligned_cols=36 Identities=22% Similarity=0.323 Sum_probs=24.7
Q ss_pred CCCceEEEEecCCccccccccCcHHHHHHHHHH---cCCC
Q 017455 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQK---LGLD 117 (371)
Q Consensus 81 ~~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~---~g~~ 117 (371)
.|.+|+|+||+||||++.... ..+...+++++ .|+.
T Consensus 2 ~~~~klia~DlDGTLL~~~~~-is~~~~~ai~~l~~~Gi~ 40 (247)
T PTZ00174 2 EMKKTILLFDVDGTLTKPRNP-ITQEMKDTLAKLKSKGFK 40 (247)
T ss_pred CCCCeEEEEECcCCCcCCCCC-CCHHHHHHHHHHHHCCCE
Confidence 367899999999999988653 33444444433 4554
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=83.50 E-value=0.62 Score=41.52 Aligned_cols=18 Identities=39% Similarity=0.553 Sum_probs=15.6
Q ss_pred CCceEEEEecCCcccccc
Q 017455 82 PRDLAVLLEVDGVLVDAY 99 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~ 99 (371)
..+|+++||+||||.|..
T Consensus 5 ~~i~~~v~d~dGv~tdg~ 22 (169)
T TIGR02726 5 KNIKLVILDVDGVMTDGR 22 (169)
T ss_pred ccCeEEEEeCceeeECCe
Confidence 348999999999999964
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=83.42 E-value=2 Score=40.80 Aligned_cols=43 Identities=19% Similarity=0.147 Sum_probs=35.2
Q ss_pred CCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccc
Q 017455 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (371)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f 230 (371)
+.|++.++|+.|+++|++++++|+. +...+..+++.+|+..++
T Consensus 22 ~~~~~~~ai~~l~~~Gi~~~iaTgR---~~~~~~~~~~~l~l~~~~ 64 (273)
T PRK00192 22 SYEPAKPALKALKEKGIPVIPCTSK---TAAEVEVLRKELGLEDPF 64 (273)
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCC---CHHHHHHHHHHcCCCCCE
Confidence 3456788899999999999999994 467788889999987544
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=83.28 E-value=0.65 Score=39.11 Aligned_cols=15 Identities=13% Similarity=0.306 Sum_probs=13.4
Q ss_pred eEEEEecCCcccccc
Q 017455 85 LAVLLEVDGVLVDAY 99 (371)
Q Consensus 85 kaviFD~DGTL~d~~ 99 (371)
|+++||+||||++..
T Consensus 1 kli~~DlD~Tl~~~~ 15 (128)
T TIGR01681 1 KVIVFDLDNTLWTGE 15 (128)
T ss_pred CEEEEeCCCCCCCCC
Confidence 689999999999874
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=82.99 E-value=2.7 Score=42.42 Aligned_cols=31 Identities=10% Similarity=-0.027 Sum_probs=26.2
Q ss_pred HHHHHHHHcCCCCCc-E--EEEeCCHhhHHHHHH
Q 017455 305 ALRAGAEYAEKPVRN-C--FLIAGSQSGVAGAQR 335 (371)
Q Consensus 305 ~~~~a~~~lgv~p~e-~--I~IgDs~~Di~aA~~ 335 (371)
|++..++.+|++..+ + |+|||..+|..|.+.
T Consensus 305 Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~ 338 (384)
T PLN02580 305 AVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKV 338 (384)
T ss_pred HHHHHHHhcCCCcccceeEEEECCCchHHHHHHh
Confidence 478889999988764 3 899999999999886
|
|
| >KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription] | Back alignment and domain information |
|---|
Probab=82.10 E-value=1.8 Score=46.21 Aligned_cols=53 Identities=23% Similarity=0.308 Sum_probs=46.7
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcc-ccchheeecchh
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE-RISKIKIVGNEE 239 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~-~~f~~~i~~~~~ 239 (371)
+++||++.+||+.+.+. +.+.|+|-++ ..++..+.+.++.+ .+|...|++.++
T Consensus 200 vKlRP~~~efL~~~skl-femhVyTmg~---R~YA~~i~~liDP~~~lF~dRIisrde 253 (635)
T KOG0323|consen 200 VKLRPFVHEFLKEANKL-FEMHVYTMGT---RDYALEIAKLIDPEGKYFGDRIISRDE 253 (635)
T ss_pred EEeCccHHHHHHHHHhh-ceeEEEeccc---hHHHHHHHHHhCCCCccccceEEEecC
Confidence 67999999999999977 9999999955 78999999999986 888888888766
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=81.93 E-value=0.73 Score=40.63 Aligned_cols=61 Identities=23% Similarity=0.317 Sum_probs=36.6
Q ss_pred CCCceEEEEecCCcccccccc-----CcHHHHH-------HHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHc
Q 017455 81 PPRDLAVLLEVDGVLVDAYRF-----GNRQAFN-------VAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRI 148 (371)
Q Consensus 81 ~~~~kaviFD~DGTL~d~~~~-----~~~~a~~-------~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 148 (371)
...+|.+|||+||||.|..-+ ....+|+ +++.+.|+.. ....|+...+.+.-..++
T Consensus 5 a~~IkLli~DVDGvLTDG~ly~~~~Gee~KaFnv~DG~Gik~l~~~Gi~v------------AIITGr~s~ive~Ra~~L 72 (170)
T COG1778 5 AKNIKLLILDVDGVLTDGKLYYDENGEEIKAFNVRDGHGIKLLLKSGIKV------------AIITGRDSPIVEKRAKDL 72 (170)
T ss_pred hhhceEEEEeccceeecCeEEEcCCCceeeeeeccCcHHHHHHHHcCCeE------------EEEeCCCCHHHHHHHHHc
Confidence 346899999999999986422 0112222 2444555542 234466666766777777
Q ss_pred CCCCC
Q 017455 149 GWPTS 153 (371)
Q Consensus 149 g~~~~ 153 (371)
|++.-
T Consensus 73 GI~~~ 77 (170)
T COG1778 73 GIKHL 77 (170)
T ss_pred CCcee
Confidence 77643
|
|
| >PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions [] | Back alignment and domain information |
|---|
Probab=80.85 E-value=4.6 Score=35.89 Aligned_cols=33 Identities=21% Similarity=0.354 Sum_probs=24.1
Q ss_pred HHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEECCCC
Q 017455 310 AEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSRC 347 (371)
Q Consensus 310 ~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~~ 347 (371)
+..-|++ ++||++.. ...|++.|++++++.++.
T Consensus 121 ~~~~G~~----viVGg~~~-~~~A~~~gl~~v~i~sg~ 153 (176)
T PF06506_consen 121 AKAEGVD----VIVGGGVV-CRLARKLGLPGVLIESGE 153 (176)
T ss_dssp HHHTT------EEEESHHH-HHHHHHTTSEEEESS--H
T ss_pred HHHcCCc----EEECCHHH-HHHHHHcCCcEEEEEecH
Confidence 4455766 89999975 788999999999998654
|
Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A. |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=80.09 E-value=9.4 Score=37.37 Aligned_cols=43 Identities=26% Similarity=0.310 Sum_probs=33.0
Q ss_pred CCccHHHHHHHHHHC----CCcEEEEcCCCCCCc-HHHHHHHHHcCcc
Q 017455 185 LRPGVEDFVDDAYNE----GIPLIVLTAYGKSGD-RIARSVVEKLGSE 227 (371)
Q Consensus 185 ~~pgv~elL~~L~~~----Gi~v~IvTn~~~~~~-~~~~~~l~~lgl~ 227 (371)
+.||+.++++.|+.+ |+++.++||.+.... ..+..+.+++|+.
T Consensus 17 ~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 17 PIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred ccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 689999999999998 999999999653223 3345555788875
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 Length = 226 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 3e-10
Identities = 33/167 (19%), Positives = 68/167 (40%), Gaps = 24/167 (14%)
Query: 80 NPPRDL-AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAG-DE 137
+ PR + A + ++DG+L+D+ +A LG+D + + L + G
Sbjct: 4 STPRQILAAIFDMDGLLIDSEPLW-DRAELDVMASLGVDISRR------NELPDTLGLRI 56
Query: 138 DRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAY 197
D ++ L++ R W P+ ++ + E+ A L + PL PGV + V
Sbjct: 57 DMVVDLWYARQPWNG--PSRQE-------VVERVIARAISLVEETRPLLPGVREAVALCK 107
Query: 198 NEGIPLIVLTAYGKSGDRIARSVVEKLG-SERISKIKIVGNEEVERS 243
+G+ + + +A S + V+ + + E++ S
Sbjct: 108 EQGLLVGLASA---SPLHMLEKVLTMFDLRDSFD--ALASAEKLPYS 149
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} Length = 277 | Back alignment and structure |
|---|
Score = 58.4 bits (141), Expect = 6e-10
Identities = 24/158 (15%), Positives = 53/158 (33%), Gaps = 6/158 (3%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
A++L+ G +D AF F++ G++ T + + + R ++
Sbjct: 16 ALILDWAGTTIDFGSLAPVYAFMELFKQEGIE---VTQAEAREPMGTEKSEHIRRMLGNS 72
Query: 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIV 205
S+ L + + + ++ + L PG ++ D +GI +
Sbjct: 73 RIANAWLSIKGQASNEEDIKRLYDLFAPIQTRIVAQRSQLIPGWKEVFDKLIAQGIKVGG 132
Query: 206 LTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243
T YG + + + + V +V R
Sbjct: 133 NTGYGP---GMMAPALIAAKEQGYTPASTVFATDVVRG 167
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A Length = 267 | Back alignment and structure |
|---|
Score = 57.6 bits (139), Expect = 1e-09
Identities = 29/163 (17%), Positives = 53/163 (32%), Gaps = 16/163 (9%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDR-----M 140
AV+ G VD F + F F K G+ I + RK G +
Sbjct: 8 AVIFAWAGTTVDYGCFAPLEVFMEIFHKRGV-------AITAEEARKPMGLLKIDHVRAL 60
Query: 141 LVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEG 200
+ W +A ++ + +E + L L + A GV++ + G
Sbjct: 61 TEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILP-RYASPINGVKEVIASLRERG 119
Query: 201 IPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243
I + T Y + V ++ + +V ++V
Sbjct: 120 IKIGSTTGY---TREMMDIVAKEAALQGYKPDFLVTPDDVPAG 159
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} Length = 214 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 2e-09
Identities = 18/163 (11%), Positives = 51/163 (31%), Gaps = 30/163 (18%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
A++ ++DGVL D ++ + G+ + + + ++
Sbjct: 7 AIIFDMDGVLFDTEKYY-YDRRASFLGQKGIS---IDHLPPSFFIGGNT---KQVWENIL 59
Query: 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIV 205
V T + +E + P V +++ ++G+ + +
Sbjct: 60 RDEYDKWDVST---------LQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGL 110
Query: 206 LTAYGKSGDRIARSVVEKLGSERISKIK-----IVGNEEVERS 243
++ S +E+ ++ ++ EE + S
Sbjct: 111 ASS---SVKADIFRALEENR------LQGFFDIVLSGEEFKES 144
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} Length = 243 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 6e-09
Identities = 28/161 (17%), Positives = 53/161 (32%), Gaps = 22/161 (13%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
V+ ++DGV+ D QA+ ++G+ A L S D L
Sbjct: 7 GVIFDLDGVITDTAHLH-FQAWQQIAAEIGIS---IDAQFNESLKGISR---DESLRRIL 59
Query: 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNAL--DEFLASKDAPLRPGVEDFVDDAYNEGIPL 203
G + E+ L +KN L + PG+ + D + I +
Sbjct: 60 QHGGKEGDFNSQERAQ-----LAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISV 114
Query: 204 IVLTAYGKSGDRIARSVVEKLG-SERISKIKIVGNEEVERS 243
+ + S A +++ L E + +++ S
Sbjct: 115 GLASV---S--LNAPTILAALELREFFT--FCADASQLKNS 148
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 9e-09
Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 21/159 (13%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
+ + ++DG L D+ N A+ A + A W + RK ML
Sbjct: 8 SFIFDLDGTLTDSVYQ-NVAAWKEALDAENIPLAMW------RIHRKIGMSGGLMLKSLS 60
Query: 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIV 205
G + E+ L EK E L + L PG + ++ E + +
Sbjct: 61 RETGMSITDEQAER-------LSEKHAQAYERLQHQIIAL-PGAVELLETLDKENLKWCI 112
Query: 206 LTAYGKSGDRIARSVVEKLG-SERISKIKIVGNEEVERS 243
T+ G A ++ L IV ++V
Sbjct: 113 ATS---GGIDTATINLKALKLDINKI--NIVTRDDVSYG 146
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} Length = 247 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 6e-08
Identities = 26/161 (16%), Positives = 54/161 (33%), Gaps = 24/161 (14%)
Query: 86 AVLLEVDGVLVD---AYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLV 142
AVL ++DGVL D + ++++ ++ G + ++ +
Sbjct: 25 AVLFDMDGVLFDSMPNHA----ESWHKIMKRFGFG---LSREEAYMHEGRTGAS---TIN 74
Query: 143 LFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIP 202
+ R + +K + Q K +EF A PG + + +EG+
Sbjct: 75 IVSRRERGHDATE-----EEIKAIYQAKT---EEFNKCPKAERMPGALEVLTKIKSEGLT 126
Query: 203 LIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243
+V+T SG + +V +V+
Sbjct: 127 PMVVTG---SGQTSLLDRLNHNFPGIFQANLMVTAFDVKYG 164
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A Length = 243 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 8e-08
Identities = 34/176 (19%), Positives = 66/176 (37%), Gaps = 25/176 (14%)
Query: 75 GHDSQNPPRDL-------AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYT 127
H S PR AVL ++DGVL ++ + + +A++ + GLD +
Sbjct: 8 HHSSGLVPRGSHMRKKLKAVLFDMDGVLFNSMPY-HSEAWHQVMKTHGLD---LSREEAY 63
Query: 128 DLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRP 187
++ + + F R E ++ + +K+ L F + +A P
Sbjct: 64 MHEGRTGAS---TINIVFQRELGKE-ATQEEIES-----IYHEKSIL--FNSYPEAERMP 112
Query: 188 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243
G + + +EG+ +V+T SG +E K +V +V+
Sbjct: 113 GAWELLQKVKSEGLTPMVVTG---SGQLSLLERLEHNFPGMFHKELMVTAFDVKYG 165
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} Length = 233 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 5e-07
Identities = 32/161 (19%), Positives = 60/161 (37%), Gaps = 22/161 (13%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
AV+ ++DGV+ D + A+ +++ + + + L S + L
Sbjct: 4 AVIFDLDGVITDTAEYH-FLAWKHIAEQIDIP---FDRDMNERLKGISREE---SLESIL 56
Query: 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAP--LRPGVEDFVDDAYNEGIPL 203
G T EK+ L +KN + L SK P L PG+ + NE I +
Sbjct: 57 IFGGAETKYTNAEKQE-----LMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKI 111
Query: 204 IVLTAYGKSGDRIARSVVEKLG-SERISKIKIVGNEEVERS 243
+ ++ R A ++ +L + IV + +
Sbjct: 112 GLASS-----SRNAPKILRRLAIIDDFH--AIVDPTTLAKG 145
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A Length = 221 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 2e-06
Identities = 30/161 (18%), Positives = 63/161 (39%), Gaps = 23/161 (14%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
AVL ++DGV+ D + +A+ +++G++ + L S D + ++
Sbjct: 4 AVLFDLDGVITDTAEYH-FRAWKALAEEIGINGVDRQ--FNEQLKGVSREDSLQKILDLA 60
Query: 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNA--LDEFLASKDAPLRPGVEDFVDDAYNEGIPL 203
++ V E K L ++KN + A + PG+ + D + I +
Sbjct: 61 DK-----KVSAEEFKE-----LAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKI 110
Query: 204 IVLTAYGKSGDRIARSVVEKLG-SERISKIKIVGNEEVERS 243
+ +A S + ++E++ + I EV S
Sbjct: 111 ALASA---S--KNGPFLLERMNLTGYFD--AIADPAEVAAS 144
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.7 bits (115), Expect = 2e-06
Identities = 46/315 (14%), Positives = 98/315 (31%), Gaps = 87/315 (27%)
Query: 10 LLNSLRFSTAITVSKKSYYHYQATQLRNHNCLSPFPSFSSTFPRNYNFHGKCLHVNPFSA 69
L++ ++ Y Q +L N N F ++ + + Y + L
Sbjct: 94 LMSPIKTEQRQPSMMTRMYIEQRDRLYNDN--QVFAKYNVSRLQPYLKLRQALL------ 145
Query: 70 FSSSSGHDSQNPPRDLAVLLEVDG-------VLV----DAYRFGNRQAFNVAFQKLGLDC 118
P +++ + DG + +Y+ + F + + L +C
Sbjct: 146 --------ELRPAKNVLI----DGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLK-NC 192
Query: 119 ANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFL 178
S ML +I P ++ + +K + + L L
Sbjct: 193 -------------NSPETVLEMLQKLLYQID-PNWTSRSDHSSNIKLRIHSIQAELRRLL 238
Query: 179 ASKDAP-----LRPGVEDF-VDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI 232
SK L V++ +A+N +++ T + + V + L + + I
Sbjct: 239 KSKPYENCLLVLL-NVQNAKAWNAFNLSCKILLTTRF--------KQVTDFLSAATTTHI 289
Query: 233 KIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDID 292
+ + +L DE + K + + Q++ EV
Sbjct: 290 SL---DHHSMTLT------------PDEVKSLLL-KYLDCRPQDLPREV----------L 323
Query: 293 TSSPESLDKIVAALR 307
T++P L I ++R
Sbjct: 324 TTNPRRLSIIAESIR 338
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.0 bits (108), Expect = 2e-05
Identities = 41/311 (13%), Positives = 88/311 (28%), Gaps = 78/311 (25%)
Query: 27 YYHYQATQL--RNHNCLSPFPSFSSTFPRNYNFHGKCLHVNPF--SAFSSSS-GHDSQNP 81
++H+ + + F F N++ C V S S H +
Sbjct: 3 HHHHMDFETGEHQYQYKDILSVFEDAFVDNFD----CKDVQDMPKSILSKEEIDHIIMSK 58
Query: 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANW-TAPIYTDLLRKSAGDEDRM 140
L L + +++ + +PI T+ + S RM
Sbjct: 59 DAVSGTLR-----LFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPS--MMTRM 111
Query: 141 LVLFFNRIGW-------PTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFV 193
+ +R+ + +V + ++ L E LRP
Sbjct: 112 YIEQRDRL-YNDNQVFAKYNVSRLQPYLKLRQALLE---------------LRPA----- 150
Query: 194 DDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQ-FVLGK 252
+++ G G ++ + + + + +V+ + + F L
Sbjct: 151 --------KNVLI--DGVLG--SGKTW---VALD------VCLSYKVQCKMDFKIFWLNL 189
Query: 253 GISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEY 312
+ + L Q++ ++ D ++ + I A LR
Sbjct: 190 KNCNSPETVL---------EMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELR--RLL 238
Query: 313 AEKPVRNCFLI 323
KP NC L+
Sbjct: 239 KSKPYENCLLV 249
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} Length = 250 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 2e-06
Identities = 29/169 (17%), Positives = 59/169 (34%), Gaps = 30/169 (17%)
Query: 81 PPRDL-AVLLEVDGVLVD---AYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGD 136
PP+ + ++ ++DG+L+D Y F + ++ + + ++ K A
Sbjct: 26 PPQPVTHLIFDMDGLLLDTERLYS----VVFQEICNRYDKK---YSWDVKSLVMGKKA-- 76
Query: 137 EDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDA 196
+ + + P S + +++E + L E A L PG E +
Sbjct: 77 -LEAAQIIIDVLQLPMSK---------EELVEESQTKLKEVFP--TAALMPGAEKLIIHL 124
Query: 197 YNEGIPLIVLTAYGKSGDRIARSVVEKLGS--ERISKIKIVGNEEVERS 243
GIP + T+ S + S I + + EV+
Sbjct: 125 RKHGIPFALATS---SRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHG 170
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 2e-04
Identities = 27/159 (16%), Positives = 54/159 (33%), Gaps = 28/159 (17%)
Query: 86 AVLLEVDGVLVD-AYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLF 144
AV+ + L+D + R F ++G I D + S + ++ L
Sbjct: 27 AVIFDWYNTLIDTSINID-RTTFYQVLDQMGY------KNIDLDSIPNSTIPK-YLITLL 78
Query: 145 FNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLI 204
R K +N+L++ S + L G + +D I +
Sbjct: 79 GKRW---------------KEATILYENSLEKSQKSDNFMLNDGAIELLDTLKENNITMA 123
Query: 205 VLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243
+++ K+G+R RS + I+G+ +
Sbjct: 124 IVS--NKNGER-LRSEIHHKNLTHYFDS-IIGSGDTGTI 158
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} Length = 220 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 3e-04
Identities = 19/142 (13%), Positives = 48/142 (33%), Gaps = 16/142 (11%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGL--DCANWTAPIYTDLLRKSAGDEDRMLVL 143
AVL++ LV ++ + + G D + + DED + +
Sbjct: 5 AVLVDFGNTLVG-FKPVFYEKVYQVLKDNGYDLDLRKVFRAYAKAMGMINYPDEDGLEHV 63
Query: 144 FFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPL 203
+ + +E+ K + + +A L +F++ + G L
Sbjct: 64 DPKDFLYILGIYPSERLV---------KELKEADIRDGEAFLYDDTLEFLEGLKSNGYKL 114
Query: 204 IVLTAYGKSGDRIARSVVEKLG 225
+++ + ++++EK
Sbjct: 115 ALVS----NASPRVKTLLEKFD 132
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} Length = 275 | Back alignment and structure |
|---|
Score = 40.1 bits (94), Expect = 6e-04
Identities = 24/189 (12%), Positives = 45/189 (23%), Gaps = 38/189 (20%)
Query: 63 HVNPFSAFSSSSGHDSQNPPRDL---AVLLEVDGVLVD---AYRFGNRQAFNVAFQKLGL 116
++ A + P L A L +VDG ++ A + +
Sbjct: 11 YIRTTKANIQTIAMPLTTKPLSLKINAALFDVDGTIIISQPAI----AAFWRDFGKDKPY 66
Query: 117 DCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDE 176
+ D + F V K
Sbjct: 67 F---DAEHVIHISHGWRTYD---AIAKFAPDFADEEYV--------------NKLEGEIP 106
Query: 177 FLASKDAPLRPGVEDFVDDAYNEGI-PLIVLTAYGKSGDR-IARSVVEKLGSERISKIKI 234
+ + PG + V T SG R +A+ + L +R
Sbjct: 107 EKYGEHSIEVPGAVKLCNALNALPKEKWAVAT----SGTRDMAKKWFDILKIKRPE--YF 160
Query: 235 VGNEEVERS 243
+ +V++
Sbjct: 161 ITANDVKQG 169
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 Length = 229 | Back alignment and structure |
|---|
Score = 39.6 bits (93), Expect = 7e-04
Identities = 25/157 (15%), Positives = 55/157 (35%), Gaps = 25/157 (15%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAG-DEDRMLVLF 144
++ + DGVLVD+ Q + + G + ++ + AG +L+
Sbjct: 6 LIIFDCDGVLVDSEIIAA-QVESRLLTEAGYPISVE------EMGERFAGMTWKNILLQV 58
Query: 145 FNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLI 204
+ P S ++L + + LD L +D + GV+ + P
Sbjct: 59 ESEASIPLSA----------SLLDKSEKLLDMRLE-RDVKIIDGVKFALSRL---TTPRC 104
Query: 205 VLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241
+ + S ++ K+G + I +++
Sbjct: 105 ICSN---SSSHRLDMMLTKVGLKPYFAPHIYSAKDLG 138
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A Length = 259 | Back alignment and structure |
|---|
Score = 39.7 bits (93), Expect = 9e-04
Identities = 22/167 (13%), Positives = 49/167 (29%), Gaps = 27/167 (16%)
Query: 81 PPRDL-AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAG-DED 138
P AVL ++DGVLV++ + + + GL ++ G D
Sbjct: 24 PDAPFDAVLFDLDGVLVESEGIIAQ-VWQSVLAERGLH---LDLT---EIAMYFTGQRFD 76
Query: 139 RMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYN 198
+L + + + L + + + G + +
Sbjct: 77 GVLAYLAQQHDFVPP----------PDFLDVLETRFNAAMT--GVTAIEGAAETLRALRA 124
Query: 199 EGIPLIVLTAYGKSGDR-IARSVVEKLG-SERISKIKIVGNEEVERS 243
G+P + + + +R + G +E + + R
Sbjct: 125 AGVPFAIGS----NSERGRLHLKLRVAGLTELAGEHIYDPSWVGGRG 167
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 371 | |||
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.97 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 99.97 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 99.96 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.95 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 99.94 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 99.94 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 99.94 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 99.94 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 99.94 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 99.94 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 99.94 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 99.94 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 99.93 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 99.93 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 99.93 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 99.93 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 99.93 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 99.93 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 99.93 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 99.92 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 99.92 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 99.92 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 99.92 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 99.92 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 99.92 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 99.91 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 99.91 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 99.91 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 99.91 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 99.91 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 99.91 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 99.9 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 99.9 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 99.9 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 99.9 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 99.9 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 99.9 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 99.9 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 99.9 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.9 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 99.9 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 99.89 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 99.89 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 99.89 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 99.89 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 99.89 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 99.89 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 99.89 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 99.89 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 99.88 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 99.88 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 99.88 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 99.87 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 99.87 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 99.87 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.87 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 99.86 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 99.86 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 99.85 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 99.85 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 99.84 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 99.84 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.83 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 99.83 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 99.82 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.82 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 99.82 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.81 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.79 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 99.78 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 99.78 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 99.78 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.78 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 99.77 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 99.76 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 99.76 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 99.75 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.75 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.74 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.73 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 99.73 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 99.71 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 99.7 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.7 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.69 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.68 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 99.63 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.63 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.63 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 99.63 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.62 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.61 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.61 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.61 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.61 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 99.6 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 99.6 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 99.59 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.58 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 99.57 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 99.57 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 99.56 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.54 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.3 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.54 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.52 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.52 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.52 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.44 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 99.39 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 99.38 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.33 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.32 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.29 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.27 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.22 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.2 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.19 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 99.15 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 99.14 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.13 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.07 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.0 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.97 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.95 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 98.93 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 98.92 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 98.9 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 98.87 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.86 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 98.85 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 98.81 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.8 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 98.66 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.6 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.57 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.54 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.49 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.34 | |
| 2jc9_A | 555 | Cytosolic purine 5'-nucleotidase; cytosolic 5-prim | 98.25 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 98.19 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 98.02 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 97.88 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 97.59 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 97.53 | |
| 3qle_A | 204 | TIM50P; chaperone, mitochondrion, preprotein trans | 97.34 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 97.16 | |
| 4g63_A | 470 | Cytosolic IMP-GMP specific 5'-nucleotidase; struct | 97.09 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 97.07 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 97.01 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 96.73 | |
| 3ef0_A | 372 | RNA polymerase II subunit A C-terminal domain phos | 96.7 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 96.62 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 96.52 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 96.49 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 96.36 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 95.93 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 95.52 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 95.23 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 95.02 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 94.74 | |
| 3ef1_A | 442 | RNA polymerase II subunit A C-terminal domain phos | 94.7 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 94.48 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 94.45 | |
| 3shq_A | 320 | UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila | 93.62 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 93.39 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 92.22 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 92.14 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 91.82 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 90.9 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 89.67 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 89.38 | |
| 2q5c_A | 196 | NTRC family transcriptional regulator; structural | 89.05 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 88.62 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 88.07 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 87.93 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 85.15 | |
| 3geb_A | 274 | EYES absent homolog 2; hydrolase, activator, alter | 84.04 | |
| 2pju_A | 225 | Propionate catabolism operon regulatory protein; s | 83.91 |
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-30 Score=233.59 Aligned_cols=210 Identities=20% Similarity=0.254 Sum_probs=156.8
Q ss_pred ceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHHHH
Q 017455 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (371)
Q Consensus 84 ~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 163 (371)
+||||||+||||+|+... +..+|+++++++|.+ ++.+.+..+.+ .................... +.+.
T Consensus 1 IkAViFD~DGTL~ds~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~-----~~~~ 68 (216)
T 3kbb_A 1 MEAVIFDMDGVLMDTEPL-YFEAYRRVAESYGKP---YTEDLHRRIMG---VPEREGLPILMEALEIKDSL-----ENFK 68 (216)
T ss_dssp CCEEEEESBTTTBCCGGG-HHHHHHHHHHHTTCC---CCHHHHHHHTT---SCHHHHHHHHHHHTTCCSCH-----HHHH
T ss_pred CeEEEECCCCcccCCHHH-HHHHHHHHHHHcCCC---CCHHHHHHHhc---cchhhhhhhhhhcccchhhH-----HHHH
Confidence 589999999999999987 899999999999987 66666655543 23334444555555554331 2222
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhh
Q 017455 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243 (371)
Q Consensus 164 ~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~ 243 (371)
+.+.+.+...+.+ ..+++||+.++++.|+++|++++++|| +....+...++.+|+.++|+.++. ++++.
T Consensus 69 ~~~~~~~~~~~~~-----~~~~~pg~~~~l~~L~~~g~~~~i~tn---~~~~~~~~~l~~~~l~~~fd~~~~-~~~~~-- 137 (216)
T 3kbb_A 69 KRVHEEKKRVFSE-----LLKENPGVREALEFVKSKRIKLALATS---TPQREALERLRRLDLEKYFDVMVF-GDQVK-- 137 (216)
T ss_dssp HHHHHHHHHHHHH-----HCCBCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHTTCGGGCSEEEC-GGGSS--
T ss_pred HHHHHHHHHHHHH-----hcccCccHHHHHHHHHHcCCCcccccC---CcHHHHHHHHHhcCCCcccccccc-ccccC--
Confidence 2333333332222 356899999999999999999999999 447889999999999999987543 32321
Q ss_pred hhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEE
Q 017455 244 LYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLI 323 (371)
Q Consensus 244 ~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~I 323 (371)
..||+|++ |+.+++++|++|++||||
T Consensus 138 ----------------------------------------~~KP~p~~--------------~~~a~~~lg~~p~e~l~V 163 (216)
T 3kbb_A 138 ----------------------------------------NGKPDPEI--------------YLLVLERLNVVPEKVVVF 163 (216)
T ss_dssp ----------------------------------------SCTTSTHH--------------HHHHHHHHTCCGGGEEEE
T ss_pred ----------------------------------------CCcccHHH--------------HHHHHHhhCCCccceEEE
Confidence 23888888 999999999999999999
Q ss_pred eCCHhhHHHHHHcCCcEEE-ECCCCCCCcccccc--cc--cchHHHHhhhhc
Q 017455 324 AGSQSGVAGAQRIGMPCVV-MRSRCITTLPVSKT--QR--LADMLCRILKSI 370 (371)
Q Consensus 324 gDs~~Di~aA~~aGm~~v~-v~~~~~~~~~l~~~--~~--~~~~l~~~l~~i 370 (371)
||+.+||.+|+++||++|+ +.++....+.+..+ .. -++++++.|++|
T Consensus 164 gDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~~~~eli~~l~eL 215 (216)
T 3kbb_A 164 EDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALVKPEEILNVLKEV 215 (216)
T ss_dssp ECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEECGGGHHHHHHHH
T ss_pred ecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEECCHHHHHHHHHHH
Confidence 9999999999999999985 78777665555432 22 257778888776
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-30 Score=239.52 Aligned_cols=217 Identities=16% Similarity=0.169 Sum_probs=157.8
Q ss_pred CCCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhH
Q 017455 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK 160 (371)
Q Consensus 81 ~~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~ 160 (371)
.|++|+||||+||||+|++.. +..+|+++++++|++ ++.+.+..+.+ .........++...+........+
T Consensus 2 ~MkiKaViFDlDGTL~Ds~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~-- 72 (243)
T 4g9b_A 2 VMKLQGVIFDLDGVITDTAHL-HFQAWQQIAAEIGIS---IDAQFNESLKG---ISRDESLRRILQHGGKEGDFNSQE-- 72 (243)
T ss_dssp CCCCCEEEECSBTTTBCCHHH-HHHHHHHHHHHTTCC---CCTTGGGGGTT---CCHHHHHHHHHHHTTCGGGCCHHH--
T ss_pred CccCcEEEEcCCCcccCCHHH-HHHHHHHHHHHcCCC---CCHHHHHHHcC---CCHHHHHHHHHHHhhcccchhHHH--
Confidence 578999999999999999987 899999999999987 44444433322 223344455666666543333221
Q ss_pred HHHHHHHHHHHHHHHHHHhc-CCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchh
Q 017455 161 AFVKNVLQEKKNALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEE 239 (371)
Q Consensus 161 ~~~~~l~~~~~~~~~~~l~~-~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~ 239 (371)
...+.......+.+.+.. ....++||+.++++.|+++|++++++||+. ....+++.+|+.++|+.+ +++++
T Consensus 73 --~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~ll~~L~~~g~~i~i~t~~~-----~~~~~l~~~gl~~~fd~i-~~~~~ 144 (243)
T 4g9b_A 73 --RAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSL-----NAPTILAALELREFFTFC-ADASQ 144 (243)
T ss_dssp --HHHHHHHHHHHHHHHHHTCCGGGBCTTHHHHHHHHHHTTCEEEECCCCT-----THHHHHHHTTCGGGCSEE-CCGGG
T ss_pred --HHHHHHHHHHHHHHHHHhcccccccccHHHHHHhhhcccccceeccccc-----chhhhhhhhhhccccccc-ccccc
Confidence 223333444444444432 234689999999999999999999999942 356789999999999874 33333
Q ss_pred HHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCc
Q 017455 240 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRN 319 (371)
Q Consensus 240 ~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e 319 (371)
+ . ..||+|++ |+.+++++|++|++
T Consensus 145 ~--------------~----------------------------~~KP~p~~--------------~~~a~~~lg~~p~e 168 (243)
T 4g9b_A 145 L--------------K----------------------------NSKPDPEI--------------FLAACAGLGVPPQA 168 (243)
T ss_dssp C--------------S----------------------------SCTTSTHH--------------HHHHHHHHTSCGGG
T ss_pred c--------------c----------------------------CCCCcHHH--------------HHHHHHHcCCChHH
Confidence 2 2 23888888 99999999999999
Q ss_pred EEEEeCCHhhHHHHHHcCCcEEEECCCCCCCcccc--cccccchHHHHhhhhc
Q 017455 320 CFLIAGSQSGVAGAQRIGMPCVVMRSRCITTLPVS--KTQRLADMLCRILKSI 370 (371)
Q Consensus 320 ~I~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l~--~~~~~~~~l~~~l~~i 370 (371)
||||||+.+||.+|+++||++|+|.++......+. .++..++++.+.++.|
T Consensus 169 ~l~VgDs~~di~aA~~aG~~~I~V~~g~~~ad~~~~~~~~l~~~~l~~~~~~l 221 (243)
T 4g9b_A 169 CIGIEDAQAGIDAINASGMRSVGIGAGLTGAQLLLPSTESLTWPRLSAFWQNV 221 (243)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEEESTTCCSCSEEESSGGGCCHHHHHHHHHHH
T ss_pred EEEEcCCHHHHHHHHHcCCEEEEECCCCCcHHHhcCChhhcCHHHHHHHHHHH
Confidence 99999999999999999999999999876544432 3345566666665543
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.96 E-value=9.5e-29 Score=229.62 Aligned_cols=206 Identities=17% Similarity=0.183 Sum_probs=148.0
Q ss_pred ceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHHHH
Q 017455 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (371)
Q Consensus 84 ~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 163 (371)
+|+||||+||||+|+... +..+|+++++++|++ ++.+.+..+.+ .........+............ ...
T Consensus 26 IKaViFDlDGTLvDs~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~----~~~ 94 (250)
T 4gib_A 26 IEAFIFDLDGVITDTAYY-HYMAWRKLAHKVGID---IDTKFNESLKG---ISRMESLDRILEFGNKKYSFSE----EEK 94 (250)
T ss_dssp CCEEEECTBTTTBCCHHH-HHHHHHHHHHTTTCC---CCTTGGGGTTT---CCHHHHHHHHHHHTTCTTTSCH----HHH
T ss_pred hheeeecCCCcccCCHHH-HHHHHHHHHHHcCCC---CCHHHHHHHhC---cchHHHHHHhhhhhcCCCCCCH----HHH
Confidence 899999999999999987 899999999999987 44433333221 1223333344444433333332 223
Q ss_pred HHHHHHHHHHHHHHHhc-CCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHh
Q 017455 164 KNVLQEKKNALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (371)
Q Consensus 164 ~~l~~~~~~~~~~~l~~-~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~ 242 (371)
..+.+.....+...... ...+++||+.++++.|+++|++++++|++ ..+...++.+|+.++|+.+ ++++++.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ll~~Lk~~g~~i~i~~~~-----~~~~~~L~~~gl~~~Fd~i-~~~~~~~- 167 (250)
T 4gib_A 95 VRMAEEKNNYYVSLIDEITSNDILPGIESLLIDVKSNNIKIGLSSAS-----KNAINVLNHLGISDKFDFI-ADAGKCK- 167 (250)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGSCTTHHHHHHHHHHTTCEEEECCSC-----TTHHHHHHHHTCGGGCSEE-CCGGGCC-
T ss_pred HHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHhccccccccccc-----chhhhHhhhccccccccee-ecccccC-
Confidence 34444555555555422 24568999999999999999999998873 3356789999999999875 3333331
Q ss_pred hhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEE
Q 017455 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (371)
Q Consensus 243 ~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~ 322 (371)
..||+|++ |+.+++++|++|++|||
T Consensus 168 -----------------------------------------~~KP~p~~--------------~~~a~~~lg~~p~e~l~ 192 (250)
T 4gib_A 168 -----------------------------------------NNKPHPEI--------------FLMSAKGLNVNPQNCIG 192 (250)
T ss_dssp -----------------------------------------SCTTSSHH--------------HHHHHHHHTCCGGGEEE
T ss_pred -----------------------------------------CCCCcHHH--------------HHHHHHHhCCChHHeEE
Confidence 23888888 99999999999999999
Q ss_pred EeCCHhhHHHHHHcCCcEEEECCCCCCCcccccccccchHHHHh
Q 017455 323 IAGSQSGVAGAQRIGMPCVVMRSRCITTLPVSKTQRLADMLCRI 366 (371)
Q Consensus 323 IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l~~~~~~~~~l~~~ 366 (371)
|||+.+||++|+++||++|+|++.. .+..++.+++++.|+
T Consensus 193 VGDs~~Di~aA~~aG~~~i~v~~~~----~~~~ad~vi~~l~eL 232 (250)
T 4gib_A 193 IEDASAGIDAINSANMFSVGVGNYE----NLKKANLVVDSTNQL 232 (250)
T ss_dssp EESSHHHHHHHHHTTCEEEEESCTT----TTTTSSEEESSGGGC
T ss_pred ECCCHHHHHHHHHcCCEEEEECChh----HhccCCEEECChHhC
Confidence 9999999999999999999997543 345566666555443
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=99.94 E-value=3e-27 Score=209.32 Aligned_cols=211 Identities=14% Similarity=0.135 Sum_probs=152.3
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHH
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (371)
|.+|+|+||+||||+++... +..++.++++++|.. ++.+.+....+ .........+....+....
T Consensus 3 ~m~k~i~fDlDGTL~~~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~-------- 67 (214)
T 3e58_A 3 AMVEAIIFDMDGVLFDTEKY-YYDRRASFLGQKGIS---IDHLPPSFFIG---GNTKQVWENILRDEYDKWD-------- 67 (214)
T ss_dssp -CCCEEEEESBTTTBCCHHH-HHHHHHHHHHHTTCC---CTTSCHHHHTT---SCGGGCHHHHHGGGGGGSC--------
T ss_pred ccccEEEEcCCCCccccHHH-HHHHHHHHHHHcCCC---CCHHHHHHHcC---CCHHHHHHHHHHhhcCCCC--------
Confidence 45899999999999999886 889999999999986 33333444332 2233344445444443322
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHH
Q 017455 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (371)
Q Consensus 162 ~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~ 241 (371)
...+.....+.+.+........++||+.++|+.|+++|++++++||. ....+...++.+|+.++|+.++.+. +.
T Consensus 68 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~---~~~~~~~~l~~~~l~~~f~~~~~~~-~~- 141 (214)
T 3e58_A 68 -VSTLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSS---VKADIFRALEENRLQGFFDIVLSGE-EF- 141 (214)
T ss_dssp -HHHHHHHHHHHHHHSCCCHHHHBCTTHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHTTCGGGCSEEEEGG-GC-
T ss_pred -HHHHHHHHHHHHHHhhcccCCCcCchHHHHHHHHHHCCCCEEEEeCC---cHHHHHHHHHHcCcHhheeeEeecc-cc-
Confidence 12333444444433321112358999999999999999999999994 4788999999999999988754322 21
Q ss_pred hhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 017455 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (371)
Q Consensus 242 ~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I 321 (371)
. ..||+|++ |+.+++++|++|++|+
T Consensus 142 -------------~----------------------------~~kp~~~~--------------~~~~~~~~~~~~~~~~ 166 (214)
T 3e58_A 142 -------------K----------------------------ESKPNPEI--------------YLTALKQLNVQASRAL 166 (214)
T ss_dssp -------------S----------------------------SCTTSSHH--------------HHHHHHHHTCCGGGEE
T ss_pred -------------c----------------------------CCCCChHH--------------HHHHHHHcCCChHHeE
Confidence 1 22777777 9999999999999999
Q ss_pred EEeCCHhhHHHHHHcCCcEEEECCCCCCCcccccccccchHHHHhhhh
Q 017455 322 LIAGSQSGVAGAQRIGMPCVVMRSRCITTLPVSKTQRLADMLCRILKS 369 (371)
Q Consensus 322 ~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l~~~~~~~~~l~~~l~~ 369 (371)
+|||+.+|+.+|+++||.+|++.++...... ..++.+++++.++++-
T Consensus 167 ~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~-~~a~~~~~~~~el~~~ 213 (214)
T 3e58_A 167 IIEDSEKGIAAGVAADVEVWAIRDNEFGMDQ-SAAKGLLDSLTDVLDL 213 (214)
T ss_dssp EEECSHHHHHHHHHTTCEEEEECCSSSCCCC-TTSSEEESSGGGGGGG
T ss_pred EEeccHhhHHHHHHCCCEEEEECCCCccchh-ccHHHHHHHHHHHHhh
Confidence 9999999999999999999999876443332 5667777777776653
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=99.94 E-value=7.9e-27 Score=214.40 Aligned_cols=215 Identities=17% Similarity=0.203 Sum_probs=150.7
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHHcCCC-CCCCChHHHHHHHHhhcCChHHHHHHHHHH-----------cC
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLD-CANWTAPIYTDLLRKSAGDEDRMLVLFFNR-----------IG 149 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-----------~g 149 (371)
|.+|+|+||+||||+|+... +..++.++++.+|+. . .+.+.+..+.+ .........+... ++
T Consensus 2 M~~k~viFDlDGTL~ds~~~-~~~~~~~~~~~~g~~~~--~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (240)
T 2hi0_A 2 MKYKAAIFDMDGTILDTSAD-LTSALNYAFEQTGHRHD--FTVEDIKNFFG---SGVVVAVTRALAYEAGSSRESLVAFG 75 (240)
T ss_dssp CSCSEEEECSBTTTEECHHH-HHHHHHHHHHHTTSCCC--CCHHHHHHHCS---SCHHHHHHHHHHHHTTCCHHHHTTTT
T ss_pred CcccEEEEecCCCCccCHHH-HHHHHHHHHHHcCCCCC--CCHHHHHHhcC---ccHHHHHHHHHHhccccccccccccc
Confidence 35799999999999999986 889999999999975 2 34444444332 2222233222210 11
Q ss_pred C-----CCCCCcchhHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHc
Q 017455 150 W-----PTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL 224 (371)
Q Consensus 150 ~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~l 224 (371)
. ....+ .+.++.+.+.+.+.|.+.. ....+++||+.++|+.|+++|++++|+|| +....+...++.+
T Consensus 76 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~t~---~~~~~~~~~l~~~ 147 (240)
T 2hi0_A 76 TKDEQIPEAVT----QTEVNRVLEVFKPYYADHC-QIKTGPFPGILDLMKNLRQKGVKLAVVSN---KPNEAVQVLVEEL 147 (240)
T ss_dssp STTCCCCTTCC----HHHHHHHHHHHHHHHHHTS-SSSCEECTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHH
T ss_pred ccccccCCCCC----HHHHHHHHHHHHHHHHHhh-hhcCCcCCCHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHHHc
Confidence 0 00111 1223344444555454432 23567899999999999999999999999 4467788899999
Q ss_pred CccccchheeecchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHH
Q 017455 225 GSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVA 304 (371)
Q Consensus 225 gl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~ 304 (371)
|+. +|+.++ +++++ . ..||+|++
T Consensus 148 ~l~-~f~~~~-~~~~~--------------~----------------------------~~Kp~p~~------------- 170 (240)
T 2hi0_A 148 FPG-SFDFAL-GEKSG--------------I----------------------------RRKPAPDM------------- 170 (240)
T ss_dssp STT-TCSEEE-EECTT--------------S----------------------------CCTTSSHH-------------
T ss_pred CCc-ceeEEE-ecCCC--------------C----------------------------CCCCCHHH-------------
Confidence 998 888643 33222 1 22788888
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEECCCCCCCcccc--cccccchHHHHhhh
Q 017455 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSRCITTLPVS--KTQRLADMLCRILK 368 (371)
Q Consensus 305 ~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l~--~~~~~~~~l~~~l~ 368 (371)
|+.+++++|++|++|++|||+.+|+.+|+++||.+|++.++......+. .++.+++++.+++.
T Consensus 171 -~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~~~~el~~ 235 (240)
T 2hi0_A 171 -TSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDTAEKLEE 235 (240)
T ss_dssp -HHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEECSHHHHHH
T ss_pred -HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEECCHHHHHH
Confidence 9999999999999999999999999999999999999988764433332 46667777666554
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.7e-27 Score=213.50 Aligned_cols=205 Identities=15% Similarity=0.194 Sum_probs=146.7
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHH
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (371)
|++|+|+||+||||+|+... +..++.++++++|.+. .+.+.+..+. |.... ..+..+ + +..+
T Consensus 2 M~~k~viFDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~~~----g~~~~---~~~~~~-~----~~~~--- 63 (210)
T 2ah5_A 2 TSITAIFFDLDGTLVDSSIG-IHNAFTYTFKELGVPS--PDAKTIRGFM----GPPLE---SSFATC-L----SKDQ--- 63 (210)
T ss_dssp TTCCEEEECSBTTTEECHHH-HHHHHHHHHHHHTCCC--CCHHHHHHTS----SSCHH---HHHHTT-S----CGGG---
T ss_pred CCCCEEEEcCCCcCccCHHH-HHHHHHHHHHHcCCCC--CCHHHHHHHc----CccHH---HHHHHH-c----CHHH---
Confidence 45899999999999999886 8899999999999863 3334333322 22211 122222 1 1111
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHH
Q 017455 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (371)
Q Consensus 162 ~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~ 241 (371)
.+.+.+.+.+.+.+.. ....+++||+.++|+.|++ |++++|+|| +....+...++++|+.++|+.++. ++ .
T Consensus 64 -~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~L~~-~~~l~i~T~---~~~~~~~~~l~~~gl~~~f~~i~~-~~-~- 134 (210)
T 2ah5_A 64 -ISEAVQIYRSYYKAKG-IYEAQLFPQIIDLLEELSS-SYPLYITTT---KDTSTAQDMAKNLEIHHFFDGIYG-SS-P- 134 (210)
T ss_dssp -HHHHHHHHHHHHHHTG-GGSCEECTTHHHHHHHHHT-TSCEEEEEE---EEHHHHHHHHHHTTCGGGCSEEEE-EC-S-
T ss_pred -HHHHHHHHHHHHHHhc-cCCCCCCCCHHHHHHHHHc-CCeEEEEeC---CCHHHHHHHHHhcCchhheeeeec-CC-C-
Confidence 2233344444443321 1235689999999999999 999999999 446778889999999999987532 22 1
Q ss_pred hhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 017455 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (371)
Q Consensus 242 ~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I 321 (371)
..||+|++ |+.+++++|++|++|+
T Consensus 135 ------------------------------------------~~Kp~p~~--------------~~~~~~~lg~~p~~~~ 158 (210)
T 2ah5_A 135 ------------------------------------------EAPHKADV--------------IHQALQTHQLAPEQAI 158 (210)
T ss_dssp ------------------------------------------SCCSHHHH--------------HHHHHHHTTCCGGGEE
T ss_pred ------------------------------------------CCCCChHH--------------HHHHHHHcCCCcccEE
Confidence 12788888 9999999999999999
Q ss_pred EEeCCHhhHHHHHHcCCcEEEECCCCCCCcccc--cccccchHHHHhhhh
Q 017455 322 LIAGSQSGVAGAQRIGMPCVVMRSRCITTLPVS--KTQRLADMLCRILKS 369 (371)
Q Consensus 322 ~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l~--~~~~~~~~l~~~l~~ 369 (371)
+|||+.+|+++|+++||++|++.++......+. .++.+++++.+.++-
T Consensus 159 ~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el~~~ 208 (210)
T 2ah5_A 159 IIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAY 208 (210)
T ss_dssp EEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHH
T ss_pred EECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHH
Confidence 999999999999999999999998765443432 456676666665543
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-26 Score=210.52 Aligned_cols=214 Identities=16% Similarity=0.157 Sum_probs=154.8
Q ss_pred CCCCCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcch
Q 017455 79 QNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNE 158 (371)
Q Consensus 79 ~~~~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~ 158 (371)
...+++|+|+||+||||+++... +..++.++++++|. .++.+.+....+ .....+...++ +... ..
T Consensus 14 ~~~~~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~---~~~~~~~~~~~g---~~~~~~~~~~~---~~~~--~~-- 79 (237)
T 4ex6_A 14 APAAADRGVILDLDGTLADTPAA-IATITAEVLAAMGT---AVSRGAILSTVG---RPLPASLAGLL---GVPV--ED-- 79 (237)
T ss_dssp ---CCCEEEEECSBTTTBCCHHH-HHHHHHHHHHHTTC---CCCHHHHHHHTT---SCHHHHHHHHH---TSCT--TS--
T ss_pred CCcccCCEEEEcCCCCCcCCHHH-HHHHHHHHHHHcCC---CCCHHHHHHhcC---ccHHHHHHHHh---CCCC--CH--
Confidence 45567999999999999999886 88999999999993 366655554442 22333333332 2211 11
Q ss_pred hHHHHHHHHHHHHHHHHHHHhc-CCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecc
Q 017455 159 KKAFVKNVLQEKKNALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (371)
Q Consensus 159 ~~~~~~~l~~~~~~~~~~~l~~-~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~ 237 (371)
..+..+...+.+.+.+.+.. ....++||+.++|+.|+++|++++|+||. ....+..+++.+|+.++|+.++. .
T Consensus 80 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~---~~~~~~~~l~~~~l~~~f~~~~~-~ 153 (237)
T 4ex6_A 80 --PRVAEATEEYGRRFGAHVRAAGPRLLYPGVLEGLDRLSAAGFRLAMATSK---VEKAARAIAELTGLDTRLTVIAG-D 153 (237)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHGGGGBCTTHHHHHHHHHHTTEEEEEECSS---CHHHHHHHHHHHTGGGTCSEEEC-T
T ss_pred --HHHHHHHHHHHHHHHHhcccccCCccCCCHHHHHHHHHhCCCcEEEEcCC---ChHHHHHHHHHcCchhheeeEEe-C
Confidence 22344455555555555420 34669999999999999999999999994 47788999999999998877432 2
Q ss_pred hhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCC
Q 017455 238 EEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV 317 (371)
Q Consensus 238 ~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p 317 (371)
+.+.. .||+|++ |+.+++++|++|
T Consensus 154 --------------~~~~~----------------------------~kp~~~~--------------~~~~~~~lg~~~ 177 (237)
T 4ex6_A 154 --------------DSVER----------------------------GKPHPDM--------------ALHVARGLGIPP 177 (237)
T ss_dssp --------------TTSSS----------------------------CTTSSHH--------------HHHHHHHHTCCG
T ss_pred --------------CCCCC----------------------------CCCCHHH--------------HHHHHHHcCCCH
Confidence 22222 2777777 999999999999
Q ss_pred CcEEEEeCCHhhHHHHHHcCCcEEEECCCCCCCcccc--cccccchHHHHhhh
Q 017455 318 RNCFLIAGSQSGVAGAQRIGMPCVVMRSRCITTLPVS--KTQRLADMLCRILK 368 (371)
Q Consensus 318 ~e~I~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l~--~~~~~~~~l~~~l~ 368 (371)
++|++|||+.+|+.+|+++||++|+|..+......+. .++.+++++.++++
T Consensus 178 ~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~ 230 (237)
T 4ex6_A 178 ERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVT 230 (237)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHHH
T ss_pred HHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHHH
Confidence 9999999999999999999999999998865544443 46777666666554
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.94 E-value=4e-26 Score=205.73 Aligned_cols=212 Identities=16% Similarity=0.175 Sum_probs=155.2
Q ss_pred CceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHHH
Q 017455 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (371)
Q Consensus 83 ~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~ 162 (371)
.+|+|+||+||||+++... +..++.++++++|++ ++.+.+.... +.....+...+....+...+ ...
T Consensus 5 ~~k~i~fDlDGTL~~~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~------~~~ 71 (233)
T 3s6j_A 5 PQTSFIFDLDGTLTDSVYQ-NVAAWKEALDAENIP---LAMWRIHRKI---GMSGGLMLKSLSRETGMSIT------DEQ 71 (233)
T ss_dssp CCCEEEECCBTTTEECHHH-HHHHHHHHHHHTTCC---CCHHHHHHHT---TSCHHHHHHHHHHC----CC------HHH
T ss_pred cCcEEEEcCCCccccChHH-HHHHHHHHHHHcCCC---CCHHHHHHHc---CCcHHHHHHHHHHhcCCCCC------HHH
Confidence 4799999999999999876 888999999999987 4544444432 22334455556666655433 222
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHh
Q 017455 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (371)
Q Consensus 163 ~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~ 242 (371)
+..+...+.+.+.+.. ....++||+.++|+.|+++|++++++||. ....+...++.+|+..+|+.++. .++.
T Consensus 72 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~s~~---~~~~~~~~l~~~~l~~~f~~~~~-~~~~-- 143 (233)
T 3s6j_A 72 AERLSEKHAQAYERLQ--HQIIALPGAVELLETLDKENLKWCIATSG---GIDTATINLKALKLDINKINIVT-RDDV-- 143 (233)
T ss_dssp HHHHHHHHHHHHHHTG--GGCEECTTHHHHHHHHHHTTCCEEEECSS---CHHHHHHHHHTTTCCTTSSCEEC-GGGS--
T ss_pred HHHHHHHHHHHHHHhh--ccCccCCCHHHHHHHHHHCCCeEEEEeCC---chhhHHHHHHhcchhhhhheeec-cccC--
Confidence 3344444444444432 34679999999999999999999999994 47788999999999998887533 2221
Q ss_pred hhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEE
Q 017455 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (371)
Q Consensus 243 ~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~ 322 (371)
. ..||+|.+ |+.+++++|++|++|++
T Consensus 144 ------------~----------------------------~~kp~~~~--------------~~~~~~~l~~~~~~~i~ 169 (233)
T 3s6j_A 144 ------------S----------------------------YGKPDPDL--------------FLAAAKKIGAPIDECLV 169 (233)
T ss_dssp ------------S----------------------------CCTTSTHH--------------HHHHHHHTTCCGGGEEE
T ss_pred ------------C----------------------------CCCCChHH--------------HHHHHHHhCCCHHHEEE
Confidence 1 12777777 99999999999999999
Q ss_pred EeCCHhhHHHHHHcCCcEEEECCCCCCCccccc--ccccchHHHHhhhh
Q 017455 323 IAGSQSGVAGAQRIGMPCVVMRSRCITTLPVSK--TQRLADMLCRILKS 369 (371)
Q Consensus 323 IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l~~--~~~~~~~l~~~l~~ 369 (371)
|||+.+|+.+|+++|+++|++.++......+.. ++.+++++.++++.
T Consensus 170 iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~~ 218 (233)
T 3s6j_A 170 IGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNH 218 (233)
T ss_dssp EESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHHHHT
T ss_pred EeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHHHHH
Confidence 999999999999999999999887555555433 66776666665543
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-25 Score=207.32 Aligned_cols=219 Identities=16% Similarity=0.139 Sum_probs=154.5
Q ss_pred CCCCCCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHH----cCCCCC
Q 017455 78 SQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR----IGWPTS 153 (371)
Q Consensus 78 ~~~~~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~g~~~~ 153 (371)
......+|+|+||+||||+|+... +..++.+++..+|... .+.+.+..+.+ .....+....+.. ++..
T Consensus 17 ~~~~~~~k~iiFDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~-- 88 (243)
T 2hsz_A 17 FQGMTQFKLIGFDLDGTLVNSLPD-LALSINSALKDVNLPQ--ASENLVMTWIG---NGADVLSQRAVDWACKQAEKE-- 88 (243)
T ss_dssp --CCSSCSEEEECSBTTTEECHHH-HHHHHHHHHHHTTCCC--CCHHHHHHHCS---SCHHHHHHHHHHHHHHHHTCC--
T ss_pred ecCCccCCEEEEcCCCcCCCCHHH-HHHHHHHHHHHcCCCC--CCHHHHHHHhC---chHHHHHHHHhhhhhcccccc--
Confidence 344566899999999999999886 8899999999999873 45555444332 2222232222221 1221
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchhe
Q 017455 154 VPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIK 233 (371)
Q Consensus 154 ~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~ 233 (371)
.. ...+..+.+.+.+.|.+.. ....+++||+.++|+.|+++|++++|+||. ....+..+++.+|+.++|+.+
T Consensus 89 ~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~---~~~~~~~~l~~~gl~~~f~~~ 160 (243)
T 2hsz_A 89 LT----EDEFKYFKRQFGFYYGENL-CNISRLYPNVKETLEALKAQGYILAVVTNK---PTKHVQPILTAFGIDHLFSEM 160 (243)
T ss_dssp CC----HHHHHHHHHHHHHHHHHHT-TSSCEECTTHHHHHHHHHHTTCEEEEECSS---CHHHHHHHHHHTTCGGGCSEE
T ss_pred CC----HHHHHHHHHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCEEEEEECC---cHHHHHHHHHHcCchheEEEE
Confidence 11 1223334444445555443 234678999999999999999999999994 477889999999999988764
Q ss_pred eecchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHc
Q 017455 234 IVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA 313 (371)
Q Consensus 234 i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~l 313 (371)
+ +++++ . ..||+|++ |+.+++++
T Consensus 161 ~-~~~~~--------------~----------------------------~~Kp~~~~--------------~~~~~~~~ 183 (243)
T 2hsz_A 161 L-GGQSL--------------P----------------------------EIKPHPAP--------------FYYLCGKF 183 (243)
T ss_dssp E-CTTTS--------------S----------------------------SCTTSSHH--------------HHHHHHHH
T ss_pred E-ecccC--------------C----------------------------CCCcCHHH--------------HHHHHHHh
Confidence 3 32221 1 22777777 99999999
Q ss_pred CCCCCcEEEEeCCHhhHHHHHHcCCcEEEECCCCCCCcc--cccccccchHHHHhhhh
Q 017455 314 EKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSRCITTLP--VSKTQRLADMLCRILKS 369 (371)
Q Consensus 314 gv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~--l~~~~~~~~~l~~~l~~ 369 (371)
|++|++|++|||+.+|+.+|+++|+.+|++.++...... ...++.+++++.++++-
T Consensus 184 ~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~~~el~~~ 241 (243)
T 2hsz_A 184 GLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKI 241 (243)
T ss_dssp TCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGG
T ss_pred CcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECCHHHHHHH
Confidence 999999999999999999999999999999887543332 23456677777666554
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.9e-26 Score=209.24 Aligned_cols=213 Identities=17% Similarity=0.276 Sum_probs=155.6
Q ss_pred CCCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhH
Q 017455 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK 160 (371)
Q Consensus 81 ~~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~ 160 (371)
.+.+|+|+||+||||+++... +..++.++++++|+. ++.+.+..+. +.........++.+++....
T Consensus 27 ~~~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~------- 92 (250)
T 3l5k_A 27 PQPVTHLIFDMDGLLLDTERL-YSVVFQEICNRYDKK---YSWDVKSLVM---GKKALEAAQIIIDVLQLPMS------- 92 (250)
T ss_dssp CCCCSEEEEETBTTTBCHHHH-HHHHHHHHHHHTTCC---CCHHHHHHHT---TCCHHHHHHHHHHHHTCSSC-------
T ss_pred ccCCcEEEEcCCCCcCCCHHH-HHHHHHHHHHHhCCC---CCHHHHHHhc---CCCHHHHHHHHHHHhCCCCC-------
Confidence 356899999999999999886 889999999999987 4444444333 23445556667777776543
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHH-cCccccchheeecchh
Q 017455 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKIKIVGNEE 239 (371)
Q Consensus 161 ~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~-lgl~~~f~~~i~~~~~ 239 (371)
...+...+.+.+.+.+ ....++||+.++|+.|+++|++++|+||.. ...+...+.. +|+.++|+.++.+.++
T Consensus 93 --~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~---~~~~~~~l~~~~~l~~~f~~~~~~~~~ 165 (250)
T 3l5k_A 93 --KEELVEESQTKLKEVF--PTAALMPGAEKLIIHLRKHGIPFALATSSR---SASFDMKTSRHKEFFSLFSHIVLGDDP 165 (250)
T ss_dssp --HHHHHHHHHHHHHHHG--GGCCBCTTHHHHHHHHHHTTCCEEEECSCC---HHHHHHHTTTCHHHHTTSSCEECTTCT
T ss_pred --HHHHHHHHHHHHHHHh--ccCCCCCCHHHHHHHHHhCCCcEEEEeCCC---HHHHHHHHHhccCHHhheeeEEecchh
Confidence 2234444445555544 246799999999999999999999999943 4555554543 5777777764322100
Q ss_pred HHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCC--
Q 017455 240 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV-- 317 (371)
Q Consensus 240 ~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p-- 317 (371)
.+.. .||+|++ |+.+++++|++|
T Consensus 166 -------------~~~~----------------------------~Kp~~~~--------------~~~~~~~lgi~~~~ 190 (250)
T 3l5k_A 166 -------------EVQH----------------------------GKPDPDI--------------FLACAKRFSPPPAM 190 (250)
T ss_dssp -------------TCCS----------------------------CTTSTHH--------------HHHHHHTSSSCCCG
T ss_pred -------------hccC----------------------------CCCChHH--------------HHHHHHHcCCCCCc
Confidence 2222 2788888 999999999998
Q ss_pred CcEEEEeCCHhhHHHHHHcCCcEEEECCCCCCCcccccccccchHHHHhhhh
Q 017455 318 RNCFLIAGSQSGVAGAQRIGMPCVVMRSRCITTLPVSKTQRLADMLCRILKS 369 (371)
Q Consensus 318 ~e~I~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l~~~~~~~~~l~~~l~~ 369 (371)
++||+|||+.+|+.+|+++||.+|++.++.........++.+++++.|++..
T Consensus 191 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~sl~el~~~ 242 (250)
T 3l5k_A 191 EKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPE 242 (250)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECSCGGGCCGG
T ss_pred ceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeecCHHHhhHH
Confidence 9999999999999999999999999998876555455677777776666543
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-25 Score=205.30 Aligned_cols=211 Identities=14% Similarity=0.211 Sum_probs=149.5
Q ss_pred CCCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHH-HHcCCCCCCCcchh
Q 017455 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF-NRIGWPTSVPTNEK 159 (371)
Q Consensus 81 ~~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~g~~~~~~~~~~ 159 (371)
.|.+|+|+||+||||+++... +..++.++++++|+. ++.+..... .++........++ ..++....
T Consensus 21 m~~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~------ 87 (243)
T 3qxg_A 21 RKKLKAVLFDMDGVLFNSMPY-HSEAWHQVMKTHGLD---LSREEAYMH---EGRTGASTINIVFQRELGKEAT------ 87 (243)
T ss_dssp -CCCCEEEECSBTTTBCCHHH-HHHHHHHHHHHTTCC---CCHHHHHHT---TTSCHHHHHHHHHHHHHSSCCC------
T ss_pred cccCCEEEEcCCCCCCCCHHH-HHHHHHHHHHHhCCC---CCHHHHHHH---hCCCHHHHHHHHHHHHhCCCCC------
Confidence 456899999999999999886 889999999999987 343332222 2223333333333 34565433
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccc--hheeecc
Q 017455 160 KAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS--KIKIVGN 237 (371)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f--~~~i~~~ 237 (371)
.+.+..+.....+.+.. .....++||+.++|+.|+++|++++++||. ....+...++. |+.++| +.++ ++
T Consensus 88 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~---~~~~~~~~l~~-~l~~~f~~d~i~-~~ 159 (243)
T 3qxg_A 88 QEEIESIYHEKSILFNS---YPEAERMPGAWELLQKVKSEGLTPMVVTGS---GQLSLLERLEH-NFPGMFHKELMV-TA 159 (243)
T ss_dssp HHHHHHHHHHHHHHHHT---SSCCCBCTTHHHHHHHHHHTTCEEEEECCC---CCHHHHTTHHH-HSTTTCCGGGEE-CT
T ss_pred HHHHHHHHHHHHHHHHh---cccCCCCCCHHHHHHHHHHcCCcEEEEeCC---cHHHHHHHHHH-hHHHhcCcceEE-eH
Confidence 22233333333333321 135679999999999999999999999994 36777777888 999988 6643 22
Q ss_pred hhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCC
Q 017455 238 EEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV 317 (371)
Q Consensus 238 ~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p 317 (371)
+.+.. .||+|++ |+.+++++|++|
T Consensus 160 --------------~~~~~----------------------------~kp~~~~--------------~~~~~~~lg~~~ 183 (243)
T 3qxg_A 160 --------------FDVKY----------------------------GKPNPEP--------------YLMALKKGGLKA 183 (243)
T ss_dssp --------------TTCSS----------------------------CTTSSHH--------------HHHHHHHTTCCG
T ss_pred --------------HhCCC----------------------------CCCChHH--------------HHHHHHHcCCCH
Confidence 22222 2788877 999999999999
Q ss_pred CcEEEEeCCHhhHHHHHHcCCcEEEECCCCCCCcccc--cccccchHHHHhhh
Q 017455 318 RNCFLIAGSQSGVAGAQRIGMPCVVMRSRCITTLPVS--KTQRLADMLCRILK 368 (371)
Q Consensus 318 ~e~I~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l~--~~~~~~~~l~~~l~ 368 (371)
++||+|||+.+|+.+|+++||.+|++.++......+. .++.+++++.++++
T Consensus 184 ~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~s~~el~~ 236 (243)
T 3qxg_A 184 DEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTLCD 236 (243)
T ss_dssp GGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEESCHHHHHH
T ss_pred HHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEECCHHHHHH
Confidence 9999999999999999999999999998876555442 46666655555443
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-25 Score=203.20 Aligned_cols=190 Identities=16% Similarity=0.226 Sum_probs=138.7
Q ss_pred ceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHHHH
Q 017455 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (371)
Q Consensus 84 ~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 163 (371)
+|+|+||+||||+++... +..++.++++++|+. ++.+.+..+. +.........+....+....++. ..+
T Consensus 2 ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~----~~~ 70 (233)
T 3nas_A 2 LKAVIFDLDGVITDTAEY-HFLAWKHIAEQIDIP---FDRDMNERLK---GISREESLESILIFGGAETKYTN----AEK 70 (233)
T ss_dssp CCEEEECSBTTTBCHHHH-HHHHHHHHHHHTTCC---CCHHHHHHTT---TCCHHHHHHHHHHHTTCTTTSCH----HHH
T ss_pred CcEEEECCCCCcCCCHHH-HHHHHHHHHHHcCCC---CCHHHHHHHc---CCCHHHHHHHHHHHhCCCCCCCH----HHH
Confidence 689999999999999886 889999999999987 4554444333 22344455566777766322332 224
Q ss_pred HHHHHHHHHHHHHHHhc-CCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHh
Q 017455 164 KNVLQEKKNALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (371)
Q Consensus 164 ~~l~~~~~~~~~~~l~~-~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~ 242 (371)
..+.....+.+.+.+.. ...+++||+.++|+.|+++|++++|+||+. . +...++.+|+.++|+.++ +++++.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~---~--~~~~l~~~gl~~~f~~i~-~~~~~~- 143 (233)
T 3nas_A 71 QELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSR---N--APKILRRLAIIDDFHAIV-DPTTLA- 143 (233)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCT---T--HHHHHHHTTCTTTCSEEC-CC-----
T ss_pred HHHHHHHHHHHHHHHhhcCcCCcCcCHHHHHHHHHHCCCcEEEEcCch---h--HHHHHHHcCcHhhcCEEe-eHhhCC-
Confidence 44555555666665533 123489999999999999999999999942 2 788899999999988743 332221
Q ss_pred hhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEE
Q 017455 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (371)
Q Consensus 243 ~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~ 322 (371)
..||+|++ |+.+++++|++|++||+
T Consensus 144 -----------------------------------------~~Kp~~~~--------------~~~~~~~lgi~~~~~i~ 168 (233)
T 3nas_A 144 -----------------------------------------KGKPDPDI--------------FLTAAAMLDVSPADCAA 168 (233)
T ss_dssp ----------------------------------------------CCH--------------HHHHHHHHTSCGGGEEE
T ss_pred -----------------------------------------CCCCChHH--------------HHHHHHHcCCCHHHEEE
Confidence 23788888 99999999999999999
Q ss_pred EeCCHhhHHHHHHcCCcEEEECCC
Q 017455 323 IAGSQSGVAGAQRIGMPCVVMRSR 346 (371)
Q Consensus 323 IgDs~~Di~aA~~aGm~~v~v~~~ 346 (371)
|||+.+|+.+|+++||.+|+++++
T Consensus 169 vGDs~~Di~~a~~aG~~~~~~~~~ 192 (233)
T 3nas_A 169 IEDAEAGISAIKSAGMFAVGVGQG 192 (233)
T ss_dssp EECSHHHHHHHHHTTCEEEECC--
T ss_pred EeCCHHHHHHHHHcCCEEEEECCc
Confidence 999999999999999999999754
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.5e-25 Score=205.51 Aligned_cols=212 Identities=14% Similarity=0.139 Sum_probs=153.5
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHH
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (371)
|.+|+|+||+||||+++... +..++.++++++|.. ...+.+.... .+.....+...+...++.... ..
T Consensus 26 ~~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~--~~---- 93 (259)
T 4eek_A 26 APFDAVLFDLDGVLVESEGI-IAQVWQSVLAERGLH---LDLTEIAMYF--TGQRFDGVLAYLAQQHDFVPP--PD---- 93 (259)
T ss_dssp CCCSEEEEESBTTTEECHHH-HHHHHHHHHHHTTCC---CCHHHHHHHT--TTCCHHHHHHHHHHHHCCCCC--TT----
T ss_pred cCCCEEEECCCCCcccCHHH-HHHHHHHHHHHhCCC---CCHHHHHHHH--hCCCHHHHHHHHHHHcCCCCC--HH----
Confidence 56899999999999999876 889999999999987 3333222211 222344555566667776544 11
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHH
Q 017455 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (371)
Q Consensus 162 ~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~ 241 (371)
.+.. ..+.+.+.+ ....++||+.++|+.|+++|++++|+||. ....+...++.+|+.++|+..+++.+++.
T Consensus 94 ~~~~----~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~s~~---~~~~~~~~l~~~~l~~~f~~~i~~~~~~~ 164 (259)
T 4eek_A 94 FLDV----LETRFNAAM--TGVTAIEGAAETLRALRAAGVPFAIGSNS---ERGRLHLKLRVAGLTELAGEHIYDPSWVG 164 (259)
T ss_dssp HHHH----HHHHHHHHH--TTCEECTTHHHHHHHHHHHTCCEEEECSS---CHHHHHHHHHHTTCHHHHCSCEECGGGGT
T ss_pred HHHH----HHHHHHHHh--ccCCcCccHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHhcChHhhccceEEeHhhcC
Confidence 1222 223333333 45779999999999999999999999994 47788999999999998887334433322
Q ss_pred hhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 017455 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (371)
Q Consensus 242 ~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I 321 (371)
. ..||+|++ |+.+++++|++|++||
T Consensus 165 ~-----------------------------------------~~Kp~~~~--------------~~~~~~~lgi~~~~~i 189 (259)
T 4eek_A 165 G-----------------------------------------RGKPHPDL--------------YTFAAQQLGILPERCV 189 (259)
T ss_dssp T-----------------------------------------CCTTSSHH--------------HHHHHHHTTCCGGGEE
T ss_pred c-----------------------------------------CCCCChHH--------------HHHHHHHcCCCHHHEE
Confidence 0 12788888 9999999999999999
Q ss_pred EEeCCHhhHHHHHHcCCcEEEECCCCCC----Cccc--ccccccchHHHHhhhh
Q 017455 322 LIAGSQSGVAGAQRIGMPCVVMRSRCIT----TLPV--SKTQRLADMLCRILKS 369 (371)
Q Consensus 322 ~IgDs~~Di~aA~~aGm~~v~v~~~~~~----~~~l--~~~~~~~~~l~~~l~~ 369 (371)
+|||+.+|+.+|+++|+.+|++.++... ...+ ..++.+++++.|+++.
T Consensus 190 ~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~el~~~ 243 (259)
T 4eek_A 190 VIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRAA 243 (259)
T ss_dssp EEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEECSHHHHHHH
T ss_pred EEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhhCCHHHHHHH
Confidence 9999999999999999999999877443 2223 3456676666665543
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=99.93 E-value=4.5e-26 Score=207.17 Aligned_cols=205 Identities=11% Similarity=0.132 Sum_probs=144.2
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHH
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (371)
|.+|+|+||+||||+|+... +..++.+++.++|.+. .+.+.+.... +.....+...++ + ...
T Consensus 1 M~~k~viFDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~~~---g~~~~~~~~~~~---~-~~~-------- 62 (222)
T 2nyv_A 1 MSLRVILFDLDGTLIDSAKD-IALALEKTLKELGLEE--YYPDNVTKYI---GGGVRALLEKVL---K-DKF-------- 62 (222)
T ss_dssp CEECEEEECTBTTTEECHHH-HHHHHHHHHHHTTCGG--GCCSCGGGGC---SSCHHHHHHHHH---G-GGC--------
T ss_pred CCCCEEEECCCCcCCCCHHH-HHHHHHHHHHHcCCCC--CCHHHHHHHh---CcCHHHHHHHHh---C-hHH--------
Confidence 35789999999999999886 8889999999999762 2222222221 112222322222 1 111
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHH
Q 017455 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (371)
Q Consensus 162 ~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~ 241 (371)
.+.+...+.+.+.+.. ....+++||+.++|+.|+++|++++|+||+ ....+..+++.+|+.++|+.++. +++
T Consensus 63 -~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~---~~~~~~~~l~~~gl~~~f~~i~~-~~~-- 134 (222)
T 2nyv_A 63 -REEYVEVFRKHYLENP-VVYTKPYPEIPYTLEALKSKGFKLAVVSNK---LEELSKKILDILNLSGYFDLIVG-GDT-- 134 (222)
T ss_dssp -CTHHHHHHHHHHHHCS-CSSCEECTTHHHHHHHHHHTTCEEEEECSS---CHHHHHHHHHHTTCGGGCSEEEC-TTS--
T ss_pred -HHHHHHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEcCC---CHHHHHHHHHHcCCHHHheEEEe-cCc--
Confidence 0123333444443322 245779999999999999999999999994 47788899999999988886432 222
Q ss_pred hhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 017455 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (371)
Q Consensus 242 ~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I 321 (371)
+. ..||+|++ |+.+++++|++|++|+
T Consensus 135 ------------~~----------------------------~~Kp~~~~--------------~~~~~~~~~~~~~~~~ 160 (222)
T 2nyv_A 135 ------------FG----------------------------EKKPSPTP--------------VLKTLEILGEEPEKAL 160 (222)
T ss_dssp ------------SC----------------------------TTCCTTHH--------------HHHHHHHHTCCGGGEE
T ss_pred ------------CC----------------------------CCCCChHH--------------HHHHHHHhCCCchhEE
Confidence 11 22788887 9999999999999999
Q ss_pred EEeCCHhhHHHHHHcCCcEEEECCCCCCCcccccccccchHHHHhh
Q 017455 322 LIAGSQSGVAGAQRIGMPCVVMRSRCITTLPVSKTQRLADMLCRIL 367 (371)
Q Consensus 322 ~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l~~~~~~~~~l~~~l 367 (371)
+|||+.+|+.+|+++||.+|++.++...... ..++.+++++.+++
T Consensus 161 ~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~~~el~ 205 (222)
T 2nyv_A 161 IVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLSRPSDLV 205 (222)
T ss_dssp EEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEESSTTHHH
T ss_pred EECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEECCHHHHH
Confidence 9999999999999999999999887654333 45555655544443
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.3e-25 Score=201.04 Aligned_cols=209 Identities=13% Similarity=0.166 Sum_probs=145.6
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHH-HHcCCCCCCCcchhH
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF-NRIGWPTSVPTNEKK 160 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~g~~~~~~~~~~~ 160 (371)
+++|+|+||+||||+++... +..++.++++++|+. .+.+..... .++........++ ..++.... .
T Consensus 21 ~~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~------~ 87 (247)
T 3dv9_A 21 IDLKAVLFDMDGVLFDSMPN-HAESWHKIMKRFGFG---LSREEAYMH---EGRTGASTINIVSRRERGHDAT------E 87 (247)
T ss_dssp CCCCEEEEESBTTTBCCHHH-HHHHHHHHHHHTTCC---CCHHHHHHT---TTSCHHHHHHHHHHHHHSSCCC------H
T ss_pred CCCCEEEECCCCccCcCHHH-HHHHHHHHHHHcCCC---CCHHHHHHH---hCCChHHHHHHHHHHhcCCCCC------H
Confidence 56899999999999999886 889999999999987 343332222 2233333333333 34565433 1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccc--hheeecch
Q 017455 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS--KIKIVGNE 238 (371)
Q Consensus 161 ~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f--~~~i~~~~ 238 (371)
+.+..+.......+.. .....++||+.++|+.|+++|++++++||+. ...+...++. |+.++| +.++ +++
T Consensus 88 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~---~~~~~~~l~~-~l~~~f~~~~~~-~~~ 159 (247)
T 3dv9_A 88 EEIKAIYQAKTEEFNK---CPKAERMPGALEVLTKIKSEGLTPMVVTGSG---QTSLLDRLNH-NFPGIFQANLMV-TAF 159 (247)
T ss_dssp HHHHHHHHHHHHHHTT---SCCCCBCTTHHHHHHHHHHTTCEEEEECSCC------CHHHHHH-HSTTTCCGGGEE-CGG
T ss_pred HHHHHHHHHHHHHHHh---cccCCCCCCHHHHHHHHHHcCCcEEEEcCCc---hHHHHHHHHh-hHHHhcCCCeEE-ecc
Confidence 2222333333222221 1346799999999999999999999999954 5666777888 999988 6643 332
Q ss_pred hHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCC
Q 017455 239 EVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVR 318 (371)
Q Consensus 239 ~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~ 318 (371)
+ +.. .||+|++ |+.+++++|++|+
T Consensus 160 ~--------------~~~----------------------------~kp~~~~--------------~~~~~~~lg~~~~ 183 (247)
T 3dv9_A 160 D--------------VKY----------------------------GKPNPEP--------------YLMALKKGGFKPN 183 (247)
T ss_dssp G--------------CSS----------------------------CTTSSHH--------------HHHHHHHHTCCGG
T ss_pred c--------------CCC----------------------------CCCCCHH--------------HHHHHHHcCCChh
Confidence 2 222 2788877 9999999999999
Q ss_pred cEEEEeCCHhhHHHHHHcCCcEEEECCCCCCCccc--ccccccchHHHHhh
Q 017455 319 NCFLIAGSQSGVAGAQRIGMPCVVMRSRCITTLPV--SKTQRLADMLCRIL 367 (371)
Q Consensus 319 e~I~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l--~~~~~~~~~l~~~l 367 (371)
+|++|||+.+|+.+|+++||.+|++.++......+ ..++.+++++.++.
T Consensus 184 ~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~~~el~ 234 (247)
T 3dv9_A 184 EALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDFN 234 (247)
T ss_dssp GEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESSHHHHH
T ss_pred heEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECCHHHHH
Confidence 99999999999999999999999999887655443 24666655555443
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-25 Score=202.30 Aligned_cols=207 Identities=13% Similarity=0.165 Sum_probs=148.2
Q ss_pred ceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHHHH
Q 017455 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (371)
Q Consensus 84 ~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 163 (371)
+|+|+||+||||+++... +..++.++++++|... ...+.+.... |.... ..+...+++. ...+
T Consensus 4 ~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~~~----g~~~~--~~~~~~~~~~--------~~~~ 66 (226)
T 3mc1_A 4 YNYVLFDLDGTLTDSAEG-ITKSVKYSLNKFDIQV--EDLSSLNKFV----GPPLK--TSFMEYYNFD--------EETA 66 (226)
T ss_dssp CCEEEECSBTTTBCCHHH-HHHHHHHHHHTTTCCC--SCGGGGGGGS----SSCHH--HHHHHHHCCC--------HHHH
T ss_pred CCEEEEeCCCccccCHHH-HHHHHHHHHHHcCCCC--CCHHHHHHHh----CcCHH--HHHHHHhCCC--------HHHH
Confidence 799999999999999876 7899999999999873 3333332222 22211 1122223332 1112
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhh
Q 017455 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243 (371)
Q Consensus 164 ~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~ 243 (371)
..+...+.+.+.+.. .....++||+.++|+.|+++|++++++|| +....+...++.+|+..+|+.++. .++
T Consensus 67 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~---~~~~~~~~~l~~~~l~~~f~~~~~-~~~---- 137 (226)
T 3mc1_A 67 TVAIDYYRDYFKAKG-MFENKVYDGIEALLSSLKDYGFHLVVATS---KPTVFSKQILEHFKLAFYFDAIVG-SSL---- 137 (226)
T ss_dssp HHHHHHHHHHHTTTG-GGSCCBCTTHHHHHHHHHHHTCEEEEEEE---EEHHHHHHHHHHTTCGGGCSEEEE-ECT----
T ss_pred HHHHHHHHHHHHHhC-cccCccCcCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHhCCHhheeeeec-cCC----
Confidence 233333333333222 23467999999999999999999999999 447788999999999998887533 222
Q ss_pred hhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEE
Q 017455 244 LYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLI 323 (371)
Q Consensus 244 ~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~I 323 (371)
+.. .||+|++ |+.+++++|++|++|++|
T Consensus 138 ----------~~~----------------------------~kp~~~~--------------~~~~~~~lgi~~~~~i~i 165 (226)
T 3mc1_A 138 ----------DGK----------------------------LSTKEDV--------------IRYAMESLNIKSDDAIMI 165 (226)
T ss_dssp ----------TSS----------------------------SCSHHHH--------------HHHHHHHHTCCGGGEEEE
T ss_pred ----------CCC----------------------------CCCCHHH--------------HHHHHHHhCcCcccEEEE
Confidence 222 2677777 999999999999999999
Q ss_pred eCCHhhHHHHHHcCCcEEEECCCCCCCccc--ccccccchHHHHhhh
Q 017455 324 AGSQSGVAGAQRIGMPCVVMRSRCITTLPV--SKTQRLADMLCRILK 368 (371)
Q Consensus 324 gDs~~Di~aA~~aGm~~v~v~~~~~~~~~l--~~~~~~~~~l~~~l~ 368 (371)
||+.+|+.+|+++|+.+|++..+......+ ..++.+++++.++++
T Consensus 166 GD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el~~ 212 (226)
T 3mc1_A 166 GDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELHK 212 (226)
T ss_dssp ESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHHHH
T ss_pred CCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHHHH
Confidence 999999999999999999999887655555 456777666666554
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-24 Score=196.67 Aligned_cols=208 Identities=15% Similarity=0.174 Sum_probs=147.0
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhh--------cCC--hHH----HHHHHHHH
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKS--------AGD--EDR----MLVLFFNR 147 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~--------~g~--~~~----~~~~~~~~ 147 (371)
|++|+|+||+||||+++... +..++.++++++|+. +.......+.... .|. ... ....++.+
T Consensus 5 m~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (238)
T 3ed5_A 5 KRYRTLLFDVDDTILDFQAA-EALALRLLFEDQNIP---LTNDMKAQYKTINQGLWRAFEEGKMTRDEVVNTRFSALLKE 80 (238)
T ss_dssp CCCCEEEECCBTTTBCHHHH-HHHHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred ccCCEEEEcCcCcCcCCchh-HHHHHHHHHHHcCCC---cchHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Confidence 56899999999999999886 889999999999987 3333322222110 000 000 11223344
Q ss_pred cCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcc
Q 017455 148 IGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (371)
Q Consensus 148 ~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~ 227 (371)
.+.+.. .....+.|.+.. .....++||+.++|+.|+++ ++++++||. ....+...++.+|+.
T Consensus 81 ~~~~~~-------------~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~---~~~~~~~~l~~~~l~ 142 (238)
T 3ed5_A 81 YGYEAD-------------GALLEQKYRRFL-EEGHQLIDGAFDLISNLQQQ-FDLYIVTNG---VSHTQYKRLRDSGLF 142 (238)
T ss_dssp TTCCCC-------------HHHHHHHHHHHH-TTCCCBCTTHHHHHHHHHTT-SEEEEEECS---CHHHHHHHHHHTTCG
T ss_pred cCCCCc-------------HHHHHHHHHHHH-HhcCCCCccHHHHHHHHHhc-CeEEEEeCC---CHHHHHHHHHHcChH
Confidence 444422 122334444444 33477999999999999999 999999994 477888899999999
Q ss_pred ccchheeecchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHH
Q 017455 228 RISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALR 307 (371)
Q Consensus 228 ~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~ 307 (371)
++|+.++.+. ++ . ..||+|++ |+
T Consensus 143 ~~f~~~~~~~-~~--------------~----------------------------~~kp~~~~--------------~~ 165 (238)
T 3ed5_A 143 PFFKDIFVSE-DT--------------G----------------------------FQKPMKEY--------------FN 165 (238)
T ss_dssp GGCSEEEEGG-GT--------------T----------------------------SCTTCHHH--------------HH
T ss_pred hhhheEEEec-cc--------------C----------------------------CCCCChHH--------------HH
Confidence 9988754332 22 1 22777777 99
Q ss_pred HHHHHcC-CCCCcEEEEeCCH-hhHHHHHHcCCcEEEECCCCCCCcccccccccchHHHHhhh
Q 017455 308 AGAEYAE-KPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCITTLPVSKTQRLADMLCRILK 368 (371)
Q Consensus 308 ~a~~~lg-v~p~e~I~IgDs~-~Di~aA~~aGm~~v~v~~~~~~~~~l~~~~~~~~~l~~~l~ 368 (371)
.+++++| ++|++|++|||+. +|+.+|+++|+.+|++..+.........++.+++++.++++
T Consensus 166 ~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~ 228 (238)
T 3ed5_A 166 YVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYH 228 (238)
T ss_dssp HHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHHH
T ss_pred HHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHHHH
Confidence 9999999 9999999999998 99999999999999998875444444456666655554443
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-25 Score=200.77 Aligned_cols=207 Identities=13% Similarity=0.106 Sum_probs=149.0
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHH
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (371)
|.+|+|+||+||||+++... +..++.+++.++|.. ++.+.+.... |.... .++.++++.. .+
T Consensus 2 M~~k~iifDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~----g~~~~---~~~~~~~~~~----~~--- 63 (209)
T 2hdo_A 2 MTYQALMFDIDGTLTNSQPA-YTTVMREVLATYGKP---FSPAQAQKTF----PMAAE---QAMTELGIAA----SE--- 63 (209)
T ss_dssp CCCSEEEECSBTTTEECHHH-HHHHHHHHHHTTTCC---CCHHHHHHHT----TSCHH---HHHHHTTCCG----GG---
T ss_pred CcccEEEEcCCCCCcCCHHH-HHHHHHHHHHHhCCC---CCHHHHHHHc----CCcHH---HHHHHcCCCH----HH---
Confidence 56799999999999999886 888999999999885 5555544443 22211 2344555431 11
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHH
Q 017455 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (371)
Q Consensus 162 ~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~ 241 (371)
+........+.+.. . ....+++||+.++|+.|+++ ++++|+||+ ....+...++.+|+.++|+.++ ++++.
T Consensus 64 -~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~---~~~~~~~~l~~~~l~~~f~~~~-~~~~~- 134 (209)
T 2hdo_A 64 -FDHFQAQYEDVMAS-H-YDQIELYPGITSLFEQLPSE-LRLGIVTSQ---RRNELESGMRSYPFMMRMAVTI-SADDT- 134 (209)
T ss_dssp -HHHHHHHHHHHHTT-C-GGGCEECTTHHHHHHHSCTT-SEEEEECSS---CHHHHHHHHTTSGGGGGEEEEE-CGGGS-
T ss_pred -HHHHHHHHHHHHhh-h-cccCCcCCCHHHHHHHHHhc-CcEEEEeCC---CHHHHHHHHHHcChHhhccEEE-ecCcC-
Confidence 11222222222211 1 13467899999999999999 999999994 4778888999999998888643 33221
Q ss_pred hhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 017455 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (371)
Q Consensus 242 ~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I 321 (371)
. ..||+|++ |+.+++++|++|++|+
T Consensus 135 -------------~----------------------------~~KP~~~~--------------~~~~~~~~~~~~~~~i 159 (209)
T 2hdo_A 135 -------------P----------------------------KRKPDPLP--------------LLTALEKVNVAPQNAL 159 (209)
T ss_dssp -------------S----------------------------CCTTSSHH--------------HHHHHHHTTCCGGGEE
T ss_pred -------------C----------------------------CCCCCcHH--------------HHHHHHHcCCCcccEE
Confidence 1 23788888 9999999999999999
Q ss_pred EEeCCHhhHHHHHHcCCcEEEECCCCCCCcccccccccchHHHHhhhhc
Q 017455 322 LIAGSQSGVAGAQRIGMPCVVMRSRCITTLPVSKTQRLADMLCRILKSI 370 (371)
Q Consensus 322 ~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l~~~~~~~~~l~~~l~~i 370 (371)
+|||+.+|+.+|+++|+.+++++++......+..++.+++++.++++-|
T Consensus 160 ~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~a~~~~~~~~el~~~l 208 (209)
T 2hdo_A 160 FIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDILELF 208 (209)
T ss_dssp EEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGGGGGC
T ss_pred EECCChhhHHHHHHcCCeEEEEcCCCCChhhhccCCEEeCCHHHHHHhh
Confidence 9999999999999999999999877654455544677777766665543
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=9e-25 Score=203.78 Aligned_cols=209 Identities=14% Similarity=0.172 Sum_probs=146.2
Q ss_pred ceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHh--------------hcCCh-HH----HHHHH
Q 017455 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRK--------------SAGDE-DR----MLVLF 144 (371)
Q Consensus 84 ~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~--------------~~g~~-~~----~~~~~ 144 (371)
+|+|+||+||||+++... +..+|.+++.++|+. ++.+.+...+.. ..|.. .. .....
T Consensus 1 ik~iiFDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 76 (263)
T 3k1z_A 1 MRLLTWDVKDTLLRLRHP-LGEAYATKARAHGLE---VEPSALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQT 76 (263)
T ss_dssp CCEEEECCBTTTEEESSC-HHHHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHHHHSTGGGGGGTCCHHHHHHHHHHHH
T ss_pred CcEEEEcCCCceeCCCCC-HHHHHHHHHHHhCCC---CCHHHHHHHHHHHHHHhhhhccccccccCCCHHHHHHHHHHHH
Confidence 479999999999998875 788999999999987 555544333211 01211 11 12233
Q ss_pred HHHcCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHc
Q 017455 145 FNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL 224 (371)
Q Consensus 145 ~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~l 224 (371)
+...|... ...+.......+..+......+++||+.++|+.|+++|++++|+||+. . .+..+++.+
T Consensus 77 ~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~---~-~~~~~l~~~ 142 (263)
T 3k1z_A 77 FHLAGVQD----------AQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFD---R-RLEGILGGL 142 (263)
T ss_dssp HHHTTCCC----------HHHHHHHHHHHHHHTTSGGGEEECTTHHHHHHHHHHTTCEEEEEESCC---T-THHHHHHHT
T ss_pred HHHcCCCC----------HHHHHHHHHHHHHHhcCcccceECcCHHHHHHHHHhCCCcEEEEeCCc---H-HHHHHHHhC
Confidence 44444411 123333344444444432345799999999999999999999999953 3 368889999
Q ss_pred CccccchheeecchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHH
Q 017455 225 GSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVA 304 (371)
Q Consensus 225 gl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~ 304 (371)
|+.++|+.++. ++++ +..||+|++
T Consensus 143 gl~~~f~~~~~-~~~~------------------------------------------~~~Kp~~~~------------- 166 (263)
T 3k1z_A 143 GLREHFDFVLT-SEAA------------------------------------------GWPKPDPRI------------- 166 (263)
T ss_dssp TCGGGCSCEEE-HHHH------------------------------------------SSCTTSHHH-------------
T ss_pred CcHHhhhEEEe-eccc------------------------------------------CCCCCCHHH-------------
Confidence 99999987543 3222 133888888
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCcEEEECCCCCCCc---ccccccccchHHHHhh
Q 017455 305 ALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCITTL---PVSKTQRLADMLCRIL 367 (371)
Q Consensus 305 ~~~~a~~~lgv~p~e~I~IgDs~-~Di~aA~~aGm~~v~v~~~~~~~~---~l~~~~~~~~~l~~~l 367 (371)
|+.+++++|++|++||+|||+. +|+.+|+++||.+|++.++..... ....++.+++++.+++
T Consensus 167 -~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el~ 232 (263)
T 3k1z_A 167 -FQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLL 232 (263)
T ss_dssp -HHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGHH
T ss_pred -HHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHHH
Confidence 9999999999999999999997 999999999999999998764332 1124555554444433
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.5e-25 Score=201.99 Aligned_cols=210 Identities=14% Similarity=0.112 Sum_probs=140.7
Q ss_pred ceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChH-HHHHHHHhh-c--CChHHHHHHHHHHc-CCCCCCCcch
Q 017455 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAP-IYTDLLRKS-A--GDEDRMLVLFFNRI-GWPTSVPTNE 158 (371)
Q Consensus 84 ~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~-~~~~~~~~~-~--g~~~~~~~~~~~~~-g~~~~~~~~~ 158 (371)
+|+|+||+||||+|+... +..++.+++.+++.....+..+ .+..+.... . .........++..+ |....
T Consensus 2 ~k~iiFDlDGTL~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----- 75 (241)
T 2hoq_A 2 VKVIFFDLDDTLVDTSKL-AEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSNFPYHFDYLLRRLDLPYNP----- 75 (241)
T ss_dssp CCEEEECSBTTTBCHHHH-HHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHCTTCTTHHHHHHHHTTCCCCH-----
T ss_pred ccEEEEcCCCCCCCChhh-HHHHHHHHHHHHHHccccccHHHHHHHHHHhhcccchhHHHHHHHHHHHhcCCccc-----
Confidence 689999999999999886 7788888888774211013332 222222110 0 00011223344454 44321
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecch
Q 017455 159 KKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNE 238 (371)
Q Consensus 159 ~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~ 238 (371)
... ....+.|.+.+.. ...++||+.++|+.|+++|++++|+||+ ....+...++.+|+..+|+.++.+.
T Consensus 76 --~~~----~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~g~~~~i~t~~---~~~~~~~~l~~~~l~~~f~~~~~~~- 144 (241)
T 2hoq_A 76 --KWI----SAGVIAYHNTKFA-YLREVPGARKVLIRLKELGYELGIITDG---NPVKQWEKILRLELDDFFEHVIISD- 144 (241)
T ss_dssp --HHH----HHHHHHHHHHHHH-HCCBCTTHHHHHHHHHHHTCEEEEEECS---CHHHHHHHHHHTTCGGGCSEEEEGG-
T ss_pred --hHH----HHHHHHHHHHHHh-hCCCCccHHHHHHHHHHCCCEEEEEECC---CchhHHHHHHHcCcHhhccEEEEeC-
Confidence 111 2222333333211 2568999999999999999999999994 4778889999999999988754332
Q ss_pred hHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCC
Q 017455 239 EVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVR 318 (371)
Q Consensus 239 ~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~ 318 (371)
++ . ..||+|++ |+.+++++|++|+
T Consensus 145 ~~--------------~----------------------------~~Kp~~~~--------------~~~~~~~~g~~~~ 168 (241)
T 2hoq_A 145 FE--------------G----------------------------VKKPHPKI--------------FKKALKAFNVKPE 168 (241)
T ss_dssp GG--------------T----------------------------CCTTCHHH--------------HHHHHHHHTCCGG
T ss_pred CC--------------C----------------------------CCCCCHHH--------------HHHHHHHcCCCcc
Confidence 22 1 23788888 9999999999999
Q ss_pred cEEEEeCCH-hhHHHHHHcCCcEEEECCCCCCCcccc---cccccchHHHHh
Q 017455 319 NCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCITTLPVS---KTQRLADMLCRI 366 (371)
Q Consensus 319 e~I~IgDs~-~Di~aA~~aGm~~v~v~~~~~~~~~l~---~~~~~~~~l~~~ 366 (371)
+|++|||+. +|+.+|+++||.+|++.++......+. .++.+++++.++
T Consensus 169 ~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i~~~~el 220 (241)
T 2hoq_A 169 EALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDNLESL 220 (241)
T ss_dssp GEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEESSTTHH
T ss_pred cEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEECCHHHH
Confidence 999999998 999999999999999987765433332 455555544443
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-24 Score=195.75 Aligned_cols=211 Identities=15% Similarity=0.216 Sum_probs=149.7
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhc---------CC--hH----HHHHHHHH
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSA---------GD--ED----RMLVLFFN 146 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~---------g~--~~----~~~~~~~~ 146 (371)
|.+|+|+||+||||+++... +..++.++++++|+.....+.+.+...+.... |. .. .....++.
T Consensus 3 m~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (240)
T 3qnm_A 3 LKYKNLFFDLDDTIWAFSRN-ARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFFYPLQ 81 (240)
T ss_dssp CCCSEEEECCBTTTBCHHHH-HHHHHHHHHHHTTGGGTSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHH
T ss_pred CCceEEEEcCCCCCcCchhh-HHHHHHHHHHHcCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 56899999999999999886 88899999999998621114443333221100 00 01 11233445
Q ss_pred HcCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCc
Q 017455 147 RIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 226 (371)
Q Consensus 147 ~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl 226 (371)
..++. . ........+.+.+.. .....++||+.++|+.|+ +|++++++||. ........++.+|+
T Consensus 82 ~~~~~-~----------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~-~g~~~~i~sn~---~~~~~~~~l~~~~l 145 (240)
T 3qnm_A 82 AVGVE-D----------EALAERFSEDFFAII-PTKSGLMPHAKEVLEYLA-PQYNLYILSNG---FRELQSRKMRSAGV 145 (240)
T ss_dssp HTTCC-C----------HHHHHHHHHHHHHHG-GGCCCBSTTHHHHHHHHT-TTSEEEEEECS---CHHHHHHHHHHHTC
T ss_pred HcCCC-c----------HHHHHHHHHHHHHHh-hhcCCcCccHHHHHHHHH-cCCeEEEEeCC---chHHHHHHHHHcCh
Confidence 55554 1 123344444455444 234779999999999999 99999999994 47788899999999
Q ss_pred cccchheeecchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHH
Q 017455 227 ERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAAL 306 (371)
Q Consensus 227 ~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~ 306 (371)
..+|+.++.+ +++ . ..||+|.+ |
T Consensus 146 ~~~f~~~~~~-~~~--------------~----------------------------~~kp~~~~--------------~ 168 (240)
T 3qnm_A 146 DRYFKKIILS-EDL--------------G----------------------------VLKPRPEI--------------F 168 (240)
T ss_dssp GGGCSEEEEG-GGT--------------T----------------------------CCTTSHHH--------------H
T ss_pred HhhceeEEEe-ccC--------------C----------------------------CCCCCHHH--------------H
Confidence 9998875432 222 1 22777777 9
Q ss_pred HHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCcEEEECCCCCCCcccccccccchHHHHhh
Q 017455 307 RAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCITTLPVSKTQRLADMLCRIL 367 (371)
Q Consensus 307 ~~a~~~lgv~p~e~I~IgDs~-~Di~aA~~aGm~~v~v~~~~~~~~~l~~~~~~~~~l~~~l 367 (371)
+.+++++|++|++|++|||+. +|+.+|+++||.+++++++.. ......++.+++++.|..
T Consensus 169 ~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~-~~~~~~~d~vi~sl~e~~ 229 (240)
T 3qnm_A 169 HFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTER-TVFPFQPTYHIHSLKELM 229 (240)
T ss_dssp HHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCC-CCCSSCCSEEESSTHHHH
T ss_pred HHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCC-CCcCCCCceEECCHHHHH
Confidence 999999999999999999996 999999999999999988765 223345677766666554
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=3.4e-24 Score=198.38 Aligned_cols=195 Identities=17% Similarity=0.170 Sum_probs=141.1
Q ss_pred CCceEEEEecCCccccccccCc-HHHHHHHHHHcCCCCCCCChHHHHHHHHh--------hcCChHHHHHHHHHHcCCCC
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGN-RQAFNVAFQKLGLDCANWTAPIYTDLLRK--------SAGDEDRMLVLFFNRIGWPT 152 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~-~~a~~~~~~~~g~~~~~~~~~~~~~~~~~--------~~g~~~~~~~~~~~~~g~~~ 152 (371)
+.+|+|+||+||||+++... + ..++.++++++|+. ++.+.+..+.+. ... .......+...++...
T Consensus 12 ~~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 86 (277)
T 3iru_A 12 GPVEALILDWAGTTIDFGSL-APVYAFMELFKQEGIE---VTQAEAREPMGTEKSEHIRRMLG-NSRIANAWLSIKGQAS 86 (277)
T ss_dssp CCCCEEEEESBTTTBSTTCC-HHHHHHHHHHHTTTCC---CCHHHHHTTTTSCHHHHHHHHTT-SHHHHHHHHHHHSSCC
T ss_pred ccCcEEEEcCCCCcccCCcc-cHHHHHHHHHHHhCCC---CCHHHHHHHhcCchHHHHHHhcc-chHHHHHHHHHhccCC
Confidence 45899999999999998775 4 68999999999987 344333322211 000 1122233344555443
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcccc-ch
Q 017455 153 SVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI-SK 231 (371)
Q Consensus 153 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~-f~ 231 (371)
. ...+..+...+.+.+.+.+.. ...++||+.++|+.|+++|++++|+||. ....+...++.+|+.++ |+
T Consensus 87 ~------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~g~~~~i~tn~---~~~~~~~~l~~~~~~~~~~~ 156 (277)
T 3iru_A 87 N------EEDIKRLYDLFAPIQTRIVAQ-RSQLIPGWKEVFDKLIAQGIKVGGNTGY---GPGMMAPALIAAKEQGYTPA 156 (277)
T ss_dssp C------HHHHHHHHHHHHHHHHHHHHH-TCCBCTTHHHHHHHHHHTTCEEEEECSS---CHHHHHHHHHHHHHTTCCCS
T ss_pred C------HHHHHHHHHHHHHHHHHHhhc-cCccCcCHHHHHHHHHHcCCeEEEEeCC---chHHHHHHHHhcCcccCCCc
Confidence 2 222344555555555554432 4679999999999999999999999994 47788899999998887 66
Q ss_pred heeecchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHH
Q 017455 232 IKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAE 311 (371)
Q Consensus 232 ~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~ 311 (371)
.+ ++.++ +.. .||+|.+ |+.+++
T Consensus 157 ~~-~~~~~--------------~~~----------------------------~kp~~~~--------------~~~~~~ 179 (277)
T 3iru_A 157 ST-VFATD--------------VVR----------------------------GRPFPDM--------------ALKVAL 179 (277)
T ss_dssp EE-ECGGG--------------SSS----------------------------CTTSSHH--------------HHHHHH
T ss_pred eE-ecHHh--------------cCC----------------------------CCCCHHH--------------HHHHHH
Confidence 53 33322 222 2777777 999999
Q ss_pred HcCCCC-CcEEEEeCCHhhHHHHHHcCCcEEEECCCCC
Q 017455 312 YAEKPV-RNCFLIAGSQSGVAGAQRIGMPCVVMRSRCI 348 (371)
Q Consensus 312 ~lgv~p-~e~I~IgDs~~Di~aA~~aGm~~v~v~~~~~ 348 (371)
++|++| ++|++|||+.+|+.+|+++||.+|+|.++..
T Consensus 180 ~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~ 217 (277)
T 3iru_A 180 ELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGN 217 (277)
T ss_dssp HHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSST
T ss_pred HcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCc
Confidence 999999 9999999999999999999999999998854
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.92 E-value=7.4e-25 Score=197.83 Aligned_cols=200 Identities=15% Similarity=0.180 Sum_probs=139.3
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHH-cCCCCCCCChHHHHHHHHhhcCChH-HHHHHHHHHcCCCCCCCcchh
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQK-LGLDCANWTAPIYTDLLRKSAGDED-RMLVLFFNRIGWPTSVPTNEK 159 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~g~~~~~~~~~~ 159 (371)
|.+|+|+||+||||+|+... +..++.+++.+ +|.+. + +.+ ....|... .....++.++|.... ..
T Consensus 2 M~~k~iifDlDGTL~d~~~~-~~~~~~~~~~~~~g~~~---~-~~~----~~~~g~~~~~~~~~~~~~~~~~~~----~~ 68 (234)
T 2hcf_A 2 MSRTLVLFDIDGTLLKVESM-NRRVLADALIEVYGTEG---S-TGS----HDFSGKMDGAIIYEVLSNVGLERA----EI 68 (234)
T ss_dssp -CCEEEEECCBTTTEEECTH-HHHHHHHHHHHHHSCCC---C-C-------CCTTCCHHHHHHHHHHTTTCCHH----HH
T ss_pred CcceEEEEcCCCCcccCccc-hHHHHHHHHHHHhCCCC---c-cch----hhhcCCChHHHHHHHHHHcCCCcc----cc
Confidence 45899999999999999986 88899999988 78763 2 111 12233333 234455666554311 00
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHC-CCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecch
Q 017455 160 KAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNE-GIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNE 238 (371)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~-Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~ 238 (371)
...+..+...+...+.+.+......++||+.++|+.|+++ |++++|+||+ ....+...++.+|+.++|+.++.+.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~---~~~~~~~~l~~~~l~~~f~~~~~~~- 144 (234)
T 2hcf_A 69 ADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGN---FEASGRHKLKLPGIDHYFPFGAFAD- 144 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSS---CHHHHHHHHHTTTCSTTCSCEECTT-
T ss_pred hhHHHHHHHHHHHHHHHHhccCCCCcCCCHHHHHHHHHhCCCceEEEEcCC---cHHHHHHHHHHCCchhhcCcceecC-
Confidence 1112333344444444433213456899999999999999 9999999994 4778888999999999988643222
Q ss_pred hHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcC--CC
Q 017455 239 EVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE--KP 316 (371)
Q Consensus 239 ~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lg--v~ 316 (371)
+... ..||.|.+ |+.+++++| ++
T Consensus 145 ~~~~-----------------------------------------~~k~~~~~--------------~~~~~~~lg~~~~ 169 (234)
T 2hcf_A 145 DALD-----------------------------------------RNELPHIA--------------LERARRMTGANYS 169 (234)
T ss_dssp TCSS-----------------------------------------GGGHHHHH--------------HHHHHHHHCCCCC
T ss_pred CCcC-----------------------------------------ccchHHHH--------------HHHHHHHhCCCCC
Confidence 1100 11455555 999999999 99
Q ss_pred CCcEEEEeCCHhhHHHHHHcCCcEEEECCCCCCCccc
Q 017455 317 VRNCFLIAGSQSGVAGAQRIGMPCVVMRSRCITTLPV 353 (371)
Q Consensus 317 p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l 353 (371)
|++|++|||+.+|+.+|+++||.+|++.++......+
T Consensus 170 ~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~ 206 (234)
T 2hcf_A 170 PSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEEL 206 (234)
T ss_dssp GGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHH
T ss_pred cccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHH
Confidence 9999999999999999999999999998876544433
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.7e-25 Score=201.17 Aligned_cols=208 Identities=12% Similarity=0.154 Sum_probs=151.2
Q ss_pred CceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHHH
Q 017455 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (371)
Q Consensus 83 ~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~ 162 (371)
.+|+|+||+||||+++... +..++.+++.++|.+ ++.+.+.... |.... ..+...++++ ...
T Consensus 28 mik~iifDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~----g~~~~--~~~~~~~~~~--------~~~ 89 (240)
T 3sd7_A 28 NYEIVLFDLDGTLTDPKEG-ITKSIQYSLNSFGIK---EDLENLDQFI----GPPLH--DTFKEYYKFE--------DKK 89 (240)
T ss_dssp CCSEEEECSBTTTEECHHH-HHHHHHHHHHHTTCC---CCGGGGGGGS----SSCHH--HHHHHTSCCC--------HHH
T ss_pred hccEEEEecCCcCccCHHH-HHHHHHHHHHHcCCC---CCHHHHHHHh----CccHH--HHHHHHhCCC--------HHH
Confidence 3699999999999999876 889999999999986 3433333222 22211 1222233332 122
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHh
Q 017455 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (371)
Q Consensus 163 ~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~ 242 (371)
+..+...+.+.+.+.. .....++||+.++|+.|+++|++++|+|| +....+...++.+|+.++|+.++.+. +.
T Consensus 90 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~l~~~~l~~~f~~~~~~~-~~-- 162 (240)
T 3sd7_A 90 AKEAVEKYREYFADKG-IFENKIYENMKEILEMLYKNGKILLVATS---KPTVFAETILRYFDIDRYFKYIAGSN-LD-- 162 (240)
T ss_dssp HHHHHHHHHHHHHHTG-GGCCEECTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHTTCGGGCSEEEEEC-TT--
T ss_pred HHHHHHHHHHHHHHhc-ccccccCccHHHHHHHHHHCCCeEEEEeC---CcHHHHHHHHHHcCcHhhEEEEEecc-cc--
Confidence 3344444444444432 23467999999999999999999999999 45788899999999999988754322 21
Q ss_pred hhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCC-CCcEE
Q 017455 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP-VRNCF 321 (371)
Q Consensus 243 ~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~-p~e~I 321 (371)
. ..||+|++ |+.+++++|++ |++|+
T Consensus 163 ------------~----------------------------~~kp~~~~--------------~~~~~~~~g~~~~~~~i 188 (240)
T 3sd7_A 163 ------------G----------------------------TRVNKNEV--------------IQYVLDLCNVKDKDKVI 188 (240)
T ss_dssp ------------S----------------------------CCCCHHHH--------------HHHHHHHHTCCCGGGEE
T ss_pred ------------C----------------------------CCCCCHHH--------------HHHHHHHcCCCCCCcEE
Confidence 1 12677777 99999999999 99999
Q ss_pred EEeCCHhhHHHHHHcCCcEEEECCCCCCCccc--ccccccchHHHHhhhh
Q 017455 322 LIAGSQSGVAGAQRIGMPCVVMRSRCITTLPV--SKTQRLADMLCRILKS 369 (371)
Q Consensus 322 ~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l--~~~~~~~~~l~~~l~~ 369 (371)
+|||+.+|+.+|+++|+.+|++.++......+ ..++.+++++.|+++-
T Consensus 189 ~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~ 238 (240)
T 3sd7_A 189 MVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDI 238 (240)
T ss_dssp EEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTHHHH
T ss_pred EECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHHHHH
Confidence 99999999999999999999999887665555 4566777666666544
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.91 E-value=4.3e-24 Score=192.28 Aligned_cols=204 Identities=13% Similarity=0.085 Sum_probs=137.6
Q ss_pred ceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHH---HHHH-----HHhh-cCCh-H---HHHHHHHHHcCC
Q 017455 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPI---YTDL-----LRKS-AGDE-D---RMLVLFFNRIGW 150 (371)
Q Consensus 84 ~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~---~~~~-----~~~~-~g~~-~---~~~~~~~~~~g~ 150 (371)
+|+|+||+||||+++... +..++.++++++|... .... +... .... .|.. . .+...+...+|.
T Consensus 4 ~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 79 (235)
T 2om6_A 4 VKLVTFDVWNTLLDLNIM-LDEFSHQLAKISGLHI---KDVANAVIEVRNEIKKMRAQASEDPRKVLTGSQEALAGKLKV 79 (235)
T ss_dssp CCEEEECCBTTTBCHHHH-HHHHHHHHHHHHTCCH---HHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHHHTC
T ss_pred ceEEEEeCCCCCCCcchh-HHHHHHHHHHHcCCCC---cHHHHHHHHHHHHHHHHhhhhcCCCcchHHHHHHHHHHHhCC
Confidence 689999999999998875 7788999999998762 2211 2111 0000 1222 2 233344444454
Q ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCC---cHHHHHHHHHcCcc
Q 017455 151 PTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSG---DRIARSVVEKLGSE 227 (371)
Q Consensus 151 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~---~~~~~~~l~~lgl~ 227 (371)
.. .....+. +.+.+.. .. ..++||+.++|+.|+++|++++++|| +. .......++.+|+.
T Consensus 80 ~~--------~~~~~~~----~~~~~~~-~~-~~~~~~~~~~l~~l~~~g~~~~i~t~---~~~~~~~~~~~~l~~~~l~ 142 (235)
T 2om6_A 80 DV--------ELVKRAT----ARAILNV-DE-SLVLEGTKEALQFVKERGLKTAVIGN---VMFWPGSYTRLLLERFGLM 142 (235)
T ss_dssp CH--------HHHHHHH----HHHHHHC-CG-GGBCTTHHHHHHHHHHTTCEEEEEEC---CCSSCHHHHHHHHHHTTCG
T ss_pred CH--------HHHHHHH----HHHHHhc-cc-cCcCccHHHHHHHHHHCCCEEEEEcC---CcccchhHHHHHHHhCCcH
Confidence 31 0011111 2222222 11 23699999999999999999999999 44 56778889999999
Q ss_pred ccchheeecchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHH
Q 017455 228 RISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALR 307 (371)
Q Consensus 228 ~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~ 307 (371)
++|+.++. ++++ +..||+|++ |+
T Consensus 143 ~~f~~~~~-~~~~------------------------------------------~~~kp~~~~--------------~~ 165 (235)
T 2om6_A 143 EFIDKTFF-ADEV------------------------------------------LSYKPRKEM--------------FE 165 (235)
T ss_dssp GGCSEEEE-HHHH------------------------------------------TCCTTCHHH--------------HH
T ss_pred HHhhhhee-cccc------------------------------------------CCCCCCHHH--------------HH
Confidence 99887543 2222 133788877 99
Q ss_pred HHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCcEEEECCCCCCCcccccccccchHHHH
Q 017455 308 AGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCITTLPVSKTQRLADMLCR 365 (371)
Q Consensus 308 ~a~~~lgv~p~e~I~IgDs~-~Di~aA~~aGm~~v~v~~~~~~~~~l~~~~~~~~~l~~ 365 (371)
.+++++|++|++|++|||+. +|+.+|+.+|+.+++++++.........++.+++++.+
T Consensus 166 ~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~e 224 (235)
T 2om6_A 166 KVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIAN 224 (235)
T ss_dssp HHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEESSGGG
T ss_pred HHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHhhHHH
Confidence 99999999999999999999 99999999999999998874322222334455444433
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-23 Score=197.17 Aligned_cols=213 Identities=13% Similarity=0.145 Sum_probs=135.7
Q ss_pred CCCCCceEEEEecCCccccccccCcHHHHHHHHHH----cCCCCCCCChHHHHHHHHhhcC--------ChHHH----HH
Q 017455 79 QNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQK----LGLDCANWTAPIYTDLLRKSAG--------DEDRM----LV 142 (371)
Q Consensus 79 ~~~~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~----~g~~~~~~~~~~~~~~~~~~~g--------~~~~~----~~ 142 (371)
...+++|+||||+||||+|+... +..+|+++++. +|++. -..+.+........+ ....+ +.
T Consensus 13 ~~~~~~k~viFDlDGTLvds~~~-~~~a~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (260)
T 2gfh_A 13 MGLSRVRAVFFDLDNTLIDTAGA-SRRGMLEVIKLLQSKYHYKE--EAEIICDKVQVKLSKECFHPYSTCITDVRTSHWE 89 (260)
T ss_dssp EECCCCCEEEECCBTTTBCHHHH-HHHHHHHHHHHHHHTTCCCT--HHHHHHHHHHHHHHTCCCC----CHHHHHHHHHH
T ss_pred cccccceEEEEcCCCCCCCCHHH-HHHHHHHHHHHHHHhcCCcH--HHHHHHHHHHHHHHhhccccccccHHHHHHHHHH
Confidence 34567899999999999999986 88888888774 55541 001111111111111 11111 11
Q ss_pred HHHHHc-CCCCCCCcchhHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHH
Q 017455 143 LFFNRI-GWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVV 221 (371)
Q Consensus 143 ~~~~~~-g~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l 221 (371)
..+... +.... .. ......+.|.+.. ....+++||+.++|+.|++ +++++|+||+ ....+...+
T Consensus 90 ~~~~~~~~~~~~------~~----~~~~~~~~~~~~~-~~~~~~~~g~~~~L~~L~~-~~~l~i~Tn~---~~~~~~~~l 154 (260)
T 2gfh_A 90 EAIQETKGGADN------RK----LAEECYFLWKSTR-LQHMILADDVKAMLTELRK-EVRLLLLTNG---DRQTQREKI 154 (260)
T ss_dssp HHHHHHHCSSCC------HH----HHHHHHHHHHHHH-HHTCCCCHHHHHHHHHHHT-TSEEEEEECS---CHHHHHHHH
T ss_pred HHHHHhcCccch------HH----HHHHHHHHHHHHH-HhcCCCCcCHHHHHHHHHc-CCcEEEEECc---ChHHHHHHH
Confidence 111111 11100 11 1112222232222 1246799999999999998 5999999994 477788999
Q ss_pred HHcCccccchheeecchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHH
Q 017455 222 EKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDK 301 (371)
Q Consensus 222 ~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~ 301 (371)
+.+|+..+|+.++.+. ++ . ..||+|++
T Consensus 155 ~~~gl~~~f~~i~~~~-~~--------------~----------------------------~~KP~p~~---------- 181 (260)
T 2gfh_A 155 EACACQSYFDAIVIGG-EQ--------------K----------------------------EEKPAPSI---------- 181 (260)
T ss_dssp HHHTCGGGCSEEEEGG-GS--------------S----------------------------SCTTCHHH----------
T ss_pred HhcCHHhhhheEEecC-CC--------------C----------------------------CCCCCHHH----------
Confidence 9999999998754332 22 1 23788888
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCC-HhhHHHHHHcCC-cEEEECCCCCCCc-ccccccccchHHHHh
Q 017455 302 IVAALRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGM-PCVVMRSRCITTL-PVSKTQRLADMLCRI 366 (371)
Q Consensus 302 ~~~~~~~a~~~lgv~p~e~I~IgDs-~~Di~aA~~aGm-~~v~v~~~~~~~~-~l~~~~~~~~~l~~~ 366 (371)
|+.+++++|++|++|+||||+ .+|+.+|+++|| .+|++.++..... ....++.+++++.++
T Consensus 182 ----~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~~~~el 245 (260)
T 2gfh_A 182 ----FYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLEL 245 (260)
T ss_dssp ----HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGH
T ss_pred ----HHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEECCHHHH
Confidence 999999999999999999995 899999999999 7999976533211 123345554444433
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.91 E-value=5.4e-24 Score=186.92 Aligned_cols=201 Identities=16% Similarity=0.182 Sum_probs=139.8
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHH
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (371)
|.+|+|+||+||||+++... +..++.++++++|+. ++...+....+. .........+....++.
T Consensus 2 M~~k~i~fDlDGTL~~~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~---------- 65 (207)
T 2go7_A 2 MQKTAFIWDLDGTLLDSYEA-ILSGIEETFAQFSIP---YDKEKVREFIFK--YSVQDLLVRVAEDRNLD---------- 65 (207)
T ss_dssp --CCEEEECTBTTTEECHHH-HHHHHHHHHHHHTCC---CCHHHHHHHHHH--SCHHHHHHHHHHHHTCC----------
T ss_pred CcccEEEEeCCCcccccHHH-HHHHHHHHHHHcCCC---CCHHHHHHHHcc--ccHHHHHHHhhchhhcc----------
Confidence 45799999999999999876 778899999999885 454544444431 12223333332222221
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHH
Q 017455 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (371)
Q Consensus 162 ~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~ 241 (371)
..........+.+.+ .....++||+.++|+.++++|++++++||. ...... .++.+|+..+|+.++.+. +.
T Consensus 66 --~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~---~~~~~~-~~~~~~~~~~f~~~~~~~-~~- 136 (207)
T 2go7_A 66 --VEVLNQVRAQSLAEK-NAQVVLMPGAREVLAWADESGIQQFIYTHK---GNNAFT-ILKDLGVESYFTEILTSQ-SG- 136 (207)
T ss_dssp --HHHHHHHHHHHHTTC-GGGCEECTTHHHHHHHHHHTTCEEEEECSS---CTHHHH-HHHHHTCGGGEEEEECGG-GC-
T ss_pred --HHHHHHHHHHHHHhc-cccceeCcCHHHHHHHHHHCCCeEEEEeCC---chHHHH-HHHHcCchhheeeEEecC-cC-
Confidence 122222333333222 234568999999999999999999999994 366777 888999998887643322 21
Q ss_pred hhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 017455 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (371)
Q Consensus 242 ~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I 321 (371)
. ..||+|++ |+.+++++|++|++|+
T Consensus 137 -------------~----------------------------~~Kp~~~~--------------~~~~~~~~~i~~~~~~ 161 (207)
T 2go7_A 137 -------------F----------------------------VRKPSPEA--------------ATYLLDKYQLNSDNTY 161 (207)
T ss_dssp -------------C----------------------------CCTTSSHH--------------HHHHHHHHTCCGGGEE
T ss_pred -------------C----------------------------CCCCCcHH--------------HHHHHHHhCCCcccEE
Confidence 1 22777777 9999999999999999
Q ss_pred EEeCCHhhHHHHHHcCCcEEEECCCCCCCcccccccccchHHHHhhh
Q 017455 322 LIAGSQSGVAGAQRIGMPCVVMRSRCITTLPVSKTQRLADMLCRILK 368 (371)
Q Consensus 322 ~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l~~~~~~~~~l~~~l~ 368 (371)
+|||+.+|+.+|+.+|+.+|++.++. . .++.+++++.++++
T Consensus 162 ~iGD~~nDi~~~~~aG~~~i~~~~~~-~-----~a~~v~~~~~el~~ 202 (207)
T 2go7_A 162 YIGDRTLDVEFAQNSGIQSINFLEST-Y-----EGNHRIQALADISR 202 (207)
T ss_dssp EEESSHHHHHHHHHHTCEEEESSCCS-C-----TTEEECSSTTHHHH
T ss_pred EECCCHHHHHHHHHCCCeEEEEecCC-C-----CCCEEeCCHHHHHH
Confidence 99999999999999999999998876 3 35556555544443
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.4e-24 Score=194.03 Aligned_cols=185 Identities=15% Similarity=0.133 Sum_probs=130.1
Q ss_pred CCCceEEEEecCCccccccccCcHHHH-HHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchh
Q 017455 81 PPRDLAVLLEVDGVLVDAYRFGNRQAF-NVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEK 159 (371)
Q Consensus 81 ~~~~kaviFD~DGTL~d~~~~~~~~a~-~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~ 159 (371)
.+.+|+|+||+||||+++... +..++ .++++++|.+...+ ....|.... ..+....+..
T Consensus 22 m~~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~~g~~~~~~---------~~~~g~~~~--~~~~~~~~~~-------- 81 (231)
T 3kzx_A 22 MKQPTAVIFDWYNTLIDTSIN-IDRTTFYQVLDQMGYKNIDL---------DSIPNSTIP--KYLITLLGKR-------- 81 (231)
T ss_dssp CCCCSEEEECTBTTTEETTSS-CCHHHHHHHHHHTTCCCCCC---------TTSCTTTHH--HHHHHHHGGG--------
T ss_pred cCCCCEEEECCCCCCcCCchh-HHHHHHHHHHHHcCCCHHHH---------HHHhCccHH--HHHHHHhCch--------
Confidence 356899999999999999875 77888 99999998863111 111121111 1111111110
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchh
Q 017455 160 KAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEE 239 (371)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~ 239 (371)
.......+.+.+..........++||+.++|+.|+++|++++|+|| +....+...++.+|+.++|+.++.+.
T Consensus 82 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~---~~~~~~~~~l~~~gl~~~f~~i~~~~-- 153 (231)
T 3kzx_A 82 ---WKEATILYENSLEKSQKSDNFMLNDGAIELLDTLKENNITMAIVSN---KNGERLRSEIHHKNLTHYFDSIIGSG-- 153 (231)
T ss_dssp ---HHHHHHHHHHHHHHCCSCCCCEECTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHTTCGGGCSEEEEET--
T ss_pred ---HHHHHHHHHHHHhhhcccccceECcCHHHHHHHHHHCCCeEEEEEC---CCHHHHHHHHHHCCchhheeeEEccc--
Confidence 1122222233332111134577999999999999999999999999 44788899999999999888753322
Q ss_pred HHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCC-
Q 017455 240 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVR- 318 (371)
Q Consensus 240 ~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~- 318 (371)
.+.. .||+|++ |+.+++++|++|+
T Consensus 154 -------------~~~~----------------------------~Kp~~~~--------------~~~~~~~lgi~~~~ 178 (231)
T 3kzx_A 154 -------------DTGT----------------------------IKPSPEP--------------VLAALTNINIEPSK 178 (231)
T ss_dssp -------------SSSC----------------------------CTTSSHH--------------HHHHHHHHTCCCST
T ss_pred -------------ccCC----------------------------CCCChHH--------------HHHHHHHcCCCccc
Confidence 2222 2788887 9999999999999
Q ss_pred cEEEEeCCHhhHHHHHHcCCcEEEECCCCC
Q 017455 319 NCFLIAGSQSGVAGAQRIGMPCVVMRSRCI 348 (371)
Q Consensus 319 e~I~IgDs~~Di~aA~~aGm~~v~v~~~~~ 348 (371)
+|++|||+.+|+.+|+++|+.+|++.++..
T Consensus 179 ~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~ 208 (231)
T 3kzx_A 179 EVFFIGDSISDIQSAIEAGCLPIKYGSTNI 208 (231)
T ss_dssp TEEEEESSHHHHHHHHHTTCEEEEECC---
T ss_pred CEEEEcCCHHHHHHHHHCCCeEEEECCCCC
Confidence 999999999999999999999999976543
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=99.91 E-value=1e-23 Score=188.29 Aligned_cols=208 Identities=16% Similarity=0.167 Sum_probs=145.7
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCh-HHHHHHHHHHcCCCCCCCcchhH
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDE-DRMLVLFFNRIGWPTSVPTNEKK 160 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~g~~~~~~~~~~~ 160 (371)
|++|+|+||+||||+++... +..++.++++++|... .+.+.+... .|.. ......+ .+.. . .
T Consensus 4 M~~k~v~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~~----~g~~~~~~~~~~---~~~~---~----~ 66 (225)
T 3d6j_A 4 MKYTVYLFDFDYTLADSSRG-IVTCFRSVLERHGYTG--ITDDMIKRT----IGKTLEESFSIL---TGIT---D----A 66 (225)
T ss_dssp -CCSEEEECCBTTTEECHHH-HHHHHHHHHHHTTCCC--CCHHHHHTT----TTSCHHHHHHHH---HCCC---C----H
T ss_pred CCCCEEEEeCCCCCCCCHHH-HHHHHHHHHHHhCCCC--CCHHHHHHH----hCCcHHHHHHHH---cCCC---C----H
Confidence 56899999999999999876 7888999999999863 444333322 2222 2222222 2221 1 1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhH
Q 017455 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 240 (371)
Q Consensus 161 ~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~ 240 (371)
..+..+...+...+.+.+ .....++||+.++++.++++|++++++||. ........++.+|+..+|+.++ +.++.
T Consensus 67 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 141 (225)
T 3d6j_A 67 DQLESFRQEYSKEADIYM-NANTILFPDTLPTLTHLKKQGIRIGIISTK---YRFRILSFLRNHMPDDWFDIII-GGEDV 141 (225)
T ss_dssp HHHHHHHHHHHHHHHHHT-GGGCEECTTHHHHHHHHHHHTCEEEEECSS---CHHHHHHHHHTSSCTTCCSEEE-CGGGC
T ss_pred HHHHHHHHHHHHHHHHhc-cccCccCcCHHHHHHHHHHCCCeEEEEECC---CHHHHHHHHHHcCchhheeeee-ehhhc
Confidence 223334444444444443 234568999999999999999999999994 4677888899999988887643 22221
Q ss_pred HhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcE
Q 017455 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (371)
Q Consensus 241 ~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~ 320 (371)
. ..||+|.+ |+.+++++|++|++|
T Consensus 142 --------------~----------------------------~~k~~~~~--------------~~~~~~~~~~~~~~~ 165 (225)
T 3d6j_A 142 --------------T----------------------------HHKPDPEG--------------LLLAIDRLKACPEEV 165 (225)
T ss_dssp --------------S----------------------------SCTTSTHH--------------HHHHHHHTTCCGGGE
T ss_pred --------------C----------------------------CCCCChHH--------------HHHHHHHhCCChHHe
Confidence 1 12677777 999999999999999
Q ss_pred EEEeCCHhhHHHHHHcCCcEEEECCCCCCCccccc--ccccchHHHHhh
Q 017455 321 FLIAGSQSGVAGAQRIGMPCVVMRSRCITTLPVSK--TQRLADMLCRIL 367 (371)
Q Consensus 321 I~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l~~--~~~~~~~l~~~l 367 (371)
++|||+.+|+.+|+.+|+.++++.++......+.. ++.+++++.+++
T Consensus 166 i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~ 214 (225)
T 3d6j_A 166 LYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQLI 214 (225)
T ss_dssp EEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEESSGGGGC
T ss_pred EEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEECCHHHHH
Confidence 99999999999999999999999988766555532 556655544443
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-23 Score=188.17 Aligned_cols=187 Identities=16% Similarity=0.216 Sum_probs=135.9
Q ss_pred ceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCCh-HHHHHHHHHHcCCCCCCCcchhHHH
Q 017455 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDE-DRMLVLFFNRIGWPTSVPTNEKKAF 162 (371)
Q Consensus 84 ~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~g~~~~~~~~~~~~~ 162 (371)
+|+|+||+||||+++... +..++.+++.++|.. .++...+ ....|.. ......+....+...+ ...
T Consensus 2 ~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~--~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~------~~~ 68 (221)
T 2wf7_A 2 FKAVLFDLDGVITDTAEY-HFRAWKALAEEIGIN--GVDRQFN----EQLKGVSREDSLQKILDLADKKVS------AEE 68 (221)
T ss_dssp CCEEEECCBTTTBTHHHH-HHHHHHHHHHHTTCC--CCSHHHH----TTTTTCCHHHHHHHHHHHTTCCCC------HHH
T ss_pred CcEEEECCCCcccCChHH-HHHHHHHHHHHcCCC--CCCHHHH----HHhCCCCHHHHHHHHHHHhCCCCC------hHH
Confidence 689999999999999876 788899999999876 1333322 2223333 3344455666664322 122
Q ss_pred HHHHHHHHHHHHHHHHhc-CCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHH
Q 017455 163 VKNVLQEKKNALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (371)
Q Consensus 163 ~~~l~~~~~~~~~~~l~~-~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~ 241 (371)
+..+.....+.+.+.+.. ....++||+.++|+.++++|++++++||. ......++.+|+.++|+.++. +
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~-----~~~~~~l~~~~l~~~f~~~~~-~---- 138 (221)
T 2wf7_A 69 FKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS-----KNGPFLLERMNLTGYFDAIAD-P---- 138 (221)
T ss_dssp HHHHHHHHHHHHHHHGGGCCGGGBCTTHHHHHHHHHHTTCEEEECCCC-----TTHHHHHHHTTCGGGCSEECC-T----
T ss_pred HHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHCCCeEEEEcCc-----HHHHHHHHHcChHHHcceEec-c----
Confidence 334444444455554422 13568999999999999999999999993 346778888999888876432 2
Q ss_pred hhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 017455 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (371)
Q Consensus 242 ~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I 321 (371)
+.+. ..||+|++ |+.+++++|++|++|+
T Consensus 139 ----------~~~~----------------------------~~Kp~~~~--------------~~~~~~~lgi~~~~~i 166 (221)
T 2wf7_A 139 ----------AEVA----------------------------ASKPAPDI--------------FIAAAHAVGVAPSESI 166 (221)
T ss_dssp ----------TTSS----------------------------SCTTSSHH--------------HHHHHHHTTCCGGGEE
T ss_pred ----------ccCC----------------------------CCCCChHH--------------HHHHHHHcCCChhHeE
Confidence 1221 23777777 9999999999999999
Q ss_pred EEeCCHhhHHHHHHcCCcEEEECC
Q 017455 322 LIAGSQSGVAGAQRIGMPCVVMRS 345 (371)
Q Consensus 322 ~IgDs~~Di~aA~~aGm~~v~v~~ 345 (371)
+|||+.+|+.+|+.+|+.+++++.
T Consensus 167 ~iGD~~nDi~~a~~aG~~~~~~~~ 190 (221)
T 2wf7_A 167 GLEDSQAGIQAIKDSGALPIGVGR 190 (221)
T ss_dssp EEESSHHHHHHHHHHTCEEEEESC
T ss_pred EEeCCHHHHHHHHHCCCEEEEECC
Confidence 999999999999999999999964
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-23 Score=187.18 Aligned_cols=210 Identities=16% Similarity=0.192 Sum_probs=146.4
Q ss_pred CceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCC-hHHHHHHHHHHcCCCCCCCcchhHH
Q 017455 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGD-EDRMLVLFFNRIGWPTSVPTNEKKA 161 (371)
Q Consensus 83 ~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (371)
.+|+|+||+||||+++... +..++..+++++|... ...+.+. ...|. .......+....++....
T Consensus 8 ~~k~i~fDlDGTL~~~~~~-~~~~~~~~~~~~g~~~--~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~------- 73 (226)
T 1te2_A 8 QILAAIFDMDGLLIDSEPL-WDRAELDVMASLGVDI--SRRNELP----DTLGLRIDMVVDLWYARQPWNGPS------- 73 (226)
T ss_dssp CCCEEEECCBTTTBCCHHH-HHHHHHHHHHHTTCCG--GGGGGSC----CCTTCCHHHHHHHHHHHSCCSSSC-------
T ss_pred CCCEEEECCCCCcCcCHHH-HHHHHHHHHHHcCCCC--ChHHHHH----HHhCCCHHHHHHHHHHHcCCCccC-------
Confidence 3799999999999999876 7788999999999863 1111111 11222 233344455555543211
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHH
Q 017455 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (371)
Q Consensus 162 ~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~ 241 (371)
...+.......+.+.+. ....++||+.++|+.+++.|++++++||. ....+...++.+|+..+|+.++.+.
T Consensus 74 -~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~t~~---~~~~~~~~l~~~~~~~~~~~~~~~~---- 144 (226)
T 1te2_A 74 -RQEVVERVIARAISLVE-ETRPLLPGVREAVALCKEQGLLVGLASAS---PLHMLEKVLTMFDLRDSFDALASAE---- 144 (226)
T ss_dssp -HHHHHHHHHHHHHHHHH-HHCCBCTTHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHTTCGGGCSEEEECT----
T ss_pred -HHHHHHHHHHHHHHHHh-ccCCcCccHHHHHHHHHHCCCcEEEEeCC---cHHHHHHHHHhcCcHhhCcEEEecc----
Confidence 11222333333333331 13568999999999999999999999994 4677888899999988887654322
Q ss_pred hhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 017455 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (371)
Q Consensus 242 ~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I 321 (371)
.+. ..||+|.. |+.+++++|+++++|+
T Consensus 145 -----------~~~----------------------------~~kp~~~~--------------~~~~~~~~~i~~~~~i 171 (226)
T 1te2_A 145 -----------KLP----------------------------YSKPHPQV--------------YLDCAAKLGVDPLTCV 171 (226)
T ss_dssp -----------TSS----------------------------CCTTSTHH--------------HHHHHHHHTSCGGGEE
T ss_pred -----------ccC----------------------------CCCCChHH--------------HHHHHHHcCCCHHHeE
Confidence 111 12677766 9999999999999999
Q ss_pred EEeCCHhhHHHHHHcCCcEEEECCCCCCCcc-cccccccchHHHHhhh
Q 017455 322 LIAGSQSGVAGAQRIGMPCVVMRSRCITTLP-VSKTQRLADMLCRILK 368 (371)
Q Consensus 322 ~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~-l~~~~~~~~~l~~~l~ 368 (371)
+|||+.+|+.+|+.+|+.++++.++...... ...++.+++++.++++
T Consensus 172 ~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~~el~~ 219 (226)
T 1te2_A 172 ALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTA 219 (226)
T ss_dssp EEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCCH
T ss_pred EEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCHHHHhH
Confidence 9999999999999999999999887654433 3445666666665554
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.90 E-value=4.1e-23 Score=185.10 Aligned_cols=207 Identities=13% Similarity=0.050 Sum_probs=137.5
Q ss_pred ceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHH-HHH-------HhhcCChHH----HHHHHHHHcCCC
Q 017455 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYT-DLL-------RKSAGDEDR----MLVLFFNRIGWP 151 (371)
Q Consensus 84 ~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~-~~~-------~~~~g~~~~----~~~~~~~~~g~~ 151 (371)
+|+|+||+||||+++... +..++..+++.+.... ....+. .+. ...+..... +........+..
T Consensus 8 ik~i~fDlDGTL~~~~~~-~~~~~~~~~~~l~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (234)
T 3ddh_A 8 IKVIAFDADDTLWSNEPF-FQEVEKQYTDLLKPYG---TSKEISAALFQTEMNNLQILGYGAKAFTISMVETALQISNGK 83 (234)
T ss_dssp CCEEEECCBTTTBCCHHH-HHHHHHHHHHHTGGGS---CHHHHHHHHHHHHHHTHHHHCSSHHHHHHHHHHHHHHHTTTC
T ss_pred ccEEEEeCCCCCccCcch-HHHHHHHHHHHHHhcC---CHHHHHHHHHHHHhhhhhhhcCCcchhHHHHHHHHHHHhcCC
Confidence 799999999999999875 6677666655544321 111111 111 111111222 122222223322
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCC-CcEEEEcCCCCCCcHHHHHHHHHcCccccc
Q 017455 152 TSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEG-IPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (371)
Q Consensus 152 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~G-i~v~IvTn~~~~~~~~~~~~l~~lgl~~~f 230 (371)
.. . .......+.+.+.+ .....++||+.++++.|+++| ++++++|| +........++.+|+.++|
T Consensus 84 ~~------~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~~i~t~---~~~~~~~~~l~~~~~~~~f 149 (234)
T 3ddh_A 84 IA------A----DIIRQIVDLGKSLL-KMPIELLPGVKETLKTLKETGKYKLVVATK---GDLLDQENKLERSGLSPYF 149 (234)
T ss_dssp CC------H----HHHHHHHHHHHHHT-TCCCCBCTTHHHHHHHHHHHCCCEEEEEEE---SCHHHHHHHHHHHTCGGGC
T ss_pred CC------H----HHHHHHHHHHHHHh-hccCCcCccHHHHHHHHHhCCCeEEEEEeC---CchHHHHHHHHHhCcHhhh
Confidence 22 1 12223333344443 345789999999999999999 99999999 4467788899999999998
Q ss_pred hheeecchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHH
Q 017455 231 KIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGA 310 (371)
Q Consensus 231 ~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~ 310 (371)
+.++.++ ||+|++ |+.++
T Consensus 150 ~~~~~~~------------------------------------------------kpk~~~--------------~~~~~ 167 (234)
T 3ddh_A 150 DHIEVMS------------------------------------------------DKTEKE--------------YLRLL 167 (234)
T ss_dssp SEEEEES------------------------------------------------CCSHHH--------------HHHHH
T ss_pred heeeecC------------------------------------------------CCCHHH--------------HHHHH
Confidence 8754221 677777 99999
Q ss_pred HHcCCCCCcEEEEeCCH-hhHHHHHHcCCcEEEECCCCCC----Ccccccc-cccchHHHHhhhhc
Q 017455 311 EYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCIT----TLPVSKT-QRLADMLCRILKSI 370 (371)
Q Consensus 311 ~~lgv~p~e~I~IgDs~-~Di~aA~~aGm~~v~v~~~~~~----~~~l~~~-~~~~~~l~~~l~~i 370 (371)
+++|++|++|++|||+. +|+.+|+++||.+|++.++... ......+ +.+++++.|+++-|
T Consensus 168 ~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el~~~l 233 (234)
T 3ddh_A 168 SILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDLLSLL 233 (234)
T ss_dssp HHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGHHHHC
T ss_pred HHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHHHHhc
Confidence 99999999999999997 9999999999999999655322 2222333 66777777666544
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.2e-23 Score=187.93 Aligned_cols=205 Identities=12% Similarity=0.044 Sum_probs=140.2
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhc---------CC----hHHHHHHHHHHc
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSA---------GD----EDRMLVLFFNRI 148 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~---------g~----~~~~~~~~~~~~ 148 (371)
+.+|+|+||+||||+++... +..++.+++.++|+. ++.+.+...+.... .. .......+..+.
T Consensus 4 ~~~k~i~fD~DGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (240)
T 3smv_A 4 TDFKALTFDCYGTLIDWETG-IVNALQPLAKRTGKT---FTSDELLEVFGRNESPQQTETPGALYQDILRAVYDRIAKEW 79 (240)
T ss_dssp GGCSEEEECCBTTTBCHHHH-HHHHTHHHHHHHTCC---CCHHHHHHHHHHHHGGGCCSSCCSCHHHHHHHHHHHHHHHT
T ss_pred ccceEEEEeCCCcCcCCchh-HHHHHHHHHHHhCCC---CCHHHHHHHHHHHHHHHHhhCCCCChhHHHHHHHHHHHHHh
Confidence 45899999999999999876 788999999999987 45544444332110 00 112233345556
Q ss_pred CCCCCCCcchhHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccc
Q 017455 149 GWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (371)
Q Consensus 149 g~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~ 228 (371)
+.+.. . .. ...+.+.. ....++||+.++|+.|++ |++++++||+ ........++. +..
T Consensus 80 ~~~~~------~----~~----~~~~~~~~--~~~~~~~~~~~~l~~l~~-~~~~~i~tn~---~~~~~~~~l~~--l~~ 137 (240)
T 3smv_A 80 GLEPD------A----AE----REEFGTSV--KNWPAFPDTVEALQYLKK-HYKLVILSNI---DRNEFKLSNAK--LGV 137 (240)
T ss_dssp TCCCC------H----HH----HHHHHTGG--GGCCBCTTHHHHHHHHHH-HSEEEEEESS---CHHHHHHHHTT--TCS
T ss_pred CCCCC------H----HH----HHHHHHHH--hcCCCCCcHHHHHHHHHh-CCeEEEEeCC---ChhHHHHHHHh--cCC
Confidence 65532 0 11 11222222 236799999999999999 8999999994 35666666665 556
Q ss_pred cchheeecchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHH
Q 017455 229 ISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRA 308 (371)
Q Consensus 229 ~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~ 308 (371)
+|+.++. ++++ +..||+|++ |+.
T Consensus 138 ~fd~i~~-~~~~------------------------------------------~~~KP~~~~--------------~~~ 160 (240)
T 3smv_A 138 EFDHIIT-AQDV------------------------------------------GSYKPNPNN--------------FTY 160 (240)
T ss_dssp CCSEEEE-HHHH------------------------------------------TSCTTSHHH--------------HHH
T ss_pred ccCEEEE-cccc------------------------------------------CCCCCCHHH--------------HHH
Confidence 7776433 3222 134888888 888
Q ss_pred H---HHHcCCCCCcEEEEeCCH-hhHHHHHHcCCcEEEECCCCC------C--CcccccccccchHHHHhhhh
Q 017455 309 G---AEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCI------T--TLPVSKTQRLADMLCRILKS 369 (371)
Q Consensus 309 a---~~~lgv~p~e~I~IgDs~-~Di~aA~~aGm~~v~v~~~~~------~--~~~l~~~~~~~~~l~~~l~~ 369 (371)
+ ++++|++|++||+|||+. +|+.+|+++||.+++++.+.. . ......++.+++++.++++.
T Consensus 161 ~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~~~ 233 (240)
T 3smv_A 161 MIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMAEA 233 (240)
T ss_dssp HHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHHHHH
T ss_pred HHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHHHH
Confidence 8 899999999999999996 999999999999999986511 1 11224567777776665543
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=99.90 E-value=9.2e-23 Score=185.67 Aligned_cols=203 Identities=12% Similarity=0.020 Sum_probs=139.6
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHH-HHHHHhhcCChHH---------------------
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIY-TDLLRKSAGDEDR--------------------- 139 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~-~~~~~~~~g~~~~--------------------- 139 (371)
|.+|+|+||+||||+++... +..++.++++++|.+ .....+ ..+.+ ....
T Consensus 13 ~~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (254)
T 3umg_A 13 RNVRAVLFDTFGTVVDWRTG-IATAVADYAARHQLE---VDAVAFADRWRA----RYQPSMDAILSGAREFVTLDILHRE 84 (254)
T ss_dssp SBCCEEEECCBTTTBCHHHH-HHHHHHHHHHHTTCC---CCHHHHHHHHHT----THHHHHHHHHTTSSCCCCHHHHHHH
T ss_pred CCceEEEEeCCCceecCchH-HHHHHHHHHHHhcCC---CCHHHHHHHHHH----hHHHHHHHHHhcCCCCCCHHHHHHH
Confidence 56899999999999999875 789999999999987 333222 22221 1111
Q ss_pred HHHHHHHHcCCCC-CCCcchhHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHH
Q 017455 140 MLVLFFNRIGWPT-SVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIAR 218 (371)
Q Consensus 140 ~~~~~~~~~g~~~-~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~ 218 (371)
....++.+++... .+. ....+.+.+. .....++||+.++|+.|+++ ++++++||. ......
T Consensus 85 ~~~~~~~~~~~~~~~~~------------~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~---~~~~~~ 146 (254)
T 3umg_A 85 NLDFVLRESGIDPTNHD------------SGELDELARA--WHVLTPWPDSVPGLTAIKAE-YIIGPLSNG---NTSLLL 146 (254)
T ss_dssp HHHHHHHHTTCCGGGSC------------HHHHHHHHGG--GGSCCBCTTHHHHHHHHHHH-SEEEECSSS---CHHHHH
T ss_pred HHHHHHHHhCCCcCcCC------------HHHHHHHHHH--HhhCcCCcCHHHHHHHHHhC-CeEEEEeCC---CHHHHH
Confidence 1112223333210 000 0001111111 13467899999999999997 999999994 477888
Q ss_pred HHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCch
Q 017455 219 SVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPES 298 (371)
Q Consensus 219 ~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~ 298 (371)
.+++.+|+. |+.+ ++++++ ...||+|.+
T Consensus 147 ~~l~~~~~~--f~~~-~~~~~~------------------------------------------~~~kp~~~~------- 174 (254)
T 3umg_A 147 DMAKNAGIP--WDVI-IGSDIN------------------------------------------RKYKPDPQA------- 174 (254)
T ss_dssp HHHHHHTCC--CSCC-CCHHHH------------------------------------------TCCTTSHHH-------
T ss_pred HHHHhCCCC--eeEE-EEcCcC------------------------------------------CCCCCCHHH-------
Confidence 899999986 6653 333222 234788877
Q ss_pred hHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEC----CCCCCCccc---ccccccchHHHHhhhh
Q 017455 299 LDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR----SRCITTLPV---SKTQRLADMLCRILKS 369 (371)
Q Consensus 299 ~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~----~~~~~~~~l---~~~~~~~~~l~~~l~~ 369 (371)
|+.+++++|++|++|++|||+.+|+.+|+.+|+.+++++ ++......+ ..++.+++++.++++.
T Consensus 175 -------~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~ 245 (254)
T 3umg_A 175 -------YLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQ 245 (254)
T ss_dssp -------HHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHH
T ss_pred -------HHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHHHHH
Confidence 999999999999999999999999999999999999998 444443333 4566777777776654
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=99.90 E-value=6e-24 Score=199.62 Aligned_cols=122 Identities=10% Similarity=0.063 Sum_probs=95.3
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHc---CccccchheeecchhHHhhhhccccccccccCCc
Q 017455 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL---GSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 258 (371)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~l---gl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~ 258 (371)
...++||+.++|+.|+++|++++|+||+. ....+.+++.+ |+.++|+.++ +. ++.
T Consensus 128 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~---~~~~~~~l~~~~~~~l~~~fd~i~-~~-~~~----------------- 185 (261)
T 1yns_A 128 KAEFFADVVPAVRKWREAGMKVYIYSSGS---VEAQKLLFGHSTEGDILELVDGHF-DT-KIG----------------- 185 (261)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSC---HHHHHHHHHTBTTBCCGGGCSEEE-CG-GGC-----------------
T ss_pred ccccCcCHHHHHHHHHhCCCeEEEEeCCC---HHHHHHHHHhhcccChHhhccEEE-ec-CCC-----------------
Confidence 47799999999999999999999999953 66777778854 5888888743 22 221
Q ss_pred hhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCC
Q 017455 259 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 338 (371)
Q Consensus 259 ~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm 338 (371)
.||+|++ |+.+++++|++|++||||||+.+||.+|+++||
T Consensus 186 --------------------------~KP~p~~--------------~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~ 225 (261)
T 1yns_A 186 --------------------------HKVESES--------------YRKIADSIGCSTNNILFLTDVTREASAAEEADV 225 (261)
T ss_dssp --------------------------CTTCHHH--------------HHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTC
T ss_pred --------------------------CCCCHHH--------------HHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCC
Confidence 2889888 999999999999999999999999999999999
Q ss_pred cEEEECCCCCCCcc-c-ccccccchHHHH
Q 017455 339 PCVVMRSRCITTLP-V-SKTQRLADMLCR 365 (371)
Q Consensus 339 ~~v~v~~~~~~~~~-l-~~~~~~~~~l~~ 365 (371)
++|++.++...... . ..++.+++++.+
T Consensus 226 ~~i~v~~~~~~~~~~~~~~~~~~i~~l~e 254 (261)
T 1yns_A 226 HVAVVVRPGNAGLTDDEKTYYSLITSFSE 254 (261)
T ss_dssp EEEEECCTTCCCCCHHHHHHSCEESSGGG
T ss_pred EEEEEeCCCCCcccccccCCCEEECCHHH
Confidence 99999765433221 1 233445555544
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.3e-24 Score=195.38 Aligned_cols=202 Identities=15% Similarity=0.133 Sum_probs=133.2
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHH-HHHHHhhcCCh--H------HHHHHHHHHcCCCC
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIY-TDLLRKSAGDE--D------RMLVLFFNRIGWPT 152 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~-~~~~~~~~g~~--~------~~~~~~~~~~g~~~ 152 (371)
|++|+|+||+||||+|+... +..++.+++.++|++ .+.+.+ ..+....+... . .....++.+++...
T Consensus 1 M~~k~viFDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~ 76 (220)
T 2zg6_A 1 MKYKAVLVDFGNTLVGFKPV-FYEKVYQVLKDNGYD---LDLRKVFRAYAKAMGMINYPDEDGLEHVDPKDFLYILGIYP 76 (220)
T ss_dssp CCCCEEEECSBTTTEEEEET-THHHHHHHHHHTTCC---CCHHHHHHHHHHHGGGCCC-----CCCCCHHHHHHHHTCCC
T ss_pred CCceEEEEcCCCceeccccc-HHHHHHHHHHHhCCC---CCHHHHHHHHHHHhhhccCCCccccccccHHHHHHHcCCCC
Confidence 45799999999999999986 889999999999987 343333 33322111110 0 00234555666542
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchh
Q 017455 153 SVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI 232 (371)
Q Consensus 153 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~ 232 (371)
. . ...+...+.+ ......+++||+.++|+.|+++|++++|+||+. . .+...++.+|+.++|+.
T Consensus 77 ~------~----~~~~~~~~~~---~~~~~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~---~-~~~~~l~~~gl~~~f~~ 139 (220)
T 2zg6_A 77 S------E----RLVKELKEAD---IRDGEAFLYDDTLEFLEGLKSNGYKLALVSNAS---P-RVKTLLEKFDLKKYFDA 139 (220)
T ss_dssp C------H----HHHHHHHHTT---TTCEEEEECTTHHHHHHHHHTTTCEEEECCSCH---H-HHHHHHHHHTCGGGCSE
T ss_pred c------H----HHHHHHHHHh---hcccCceECcCHHHHHHHHHHCCCEEEEEeCCc---H-HHHHHHHhcCcHhHeeE
Confidence 1 1 1112221111 112245789999999999999999999999952 4 47888999999999987
Q ss_pred eeecchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHH
Q 017455 233 KIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEY 312 (371)
Q Consensus 233 ~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~ 312 (371)
++. ++++. ..||+|++ |+.++++
T Consensus 140 ~~~-~~~~~------------------------------------------~~Kp~~~~--------------~~~~~~~ 162 (220)
T 2zg6_A 140 LAL-SYEIK------------------------------------------AVKPNPKI--------------FGFALAK 162 (220)
T ss_dssp EC------------------------------------------------------CCH--------------HHHHHHH
T ss_pred EEe-ccccC------------------------------------------CCCCCHHH--------------HHHHHHH
Confidence 543 22221 23888888 9999999
Q ss_pred cCCCCCcEEEEeCCHh-hHHHHHHcCCcEEEECCCCCCCcccccccccchHHHHhhh
Q 017455 313 AEKPVRNCFLIAGSQS-GVAGAQRIGMPCVVMRSRCITTLPVSKTQRLADMLCRILK 368 (371)
Q Consensus 313 lgv~p~e~I~IgDs~~-Di~aA~~aGm~~v~v~~~~~~~~~l~~~~~~~~~l~~~l~ 368 (371)
+|++| +||||+.+ |+.+|+++||++|++.++... ..+ +.+++++.++++
T Consensus 163 ~~~~~---~~vgD~~~~Di~~a~~aG~~~i~v~~~~~~-~~~---~~~i~~l~el~~ 212 (220)
T 2zg6_A 163 VGYPA---VHVGDIYELDYIGAKRSYVDPILLDRYDFY-PDV---RDRVKNLREALQ 212 (220)
T ss_dssp HCSSE---EEEESSCCCCCCCSSSCSEEEEEBCTTSCC-TTC---CSCBSSHHHHHH
T ss_pred cCCCe---EEEcCCchHhHHHHHHCCCeEEEECCCCCC-CCc---ceEECCHHHHHH
Confidence 99998 99999998 999999999999999765322 222 334555555443
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=99.90 E-value=8.5e-23 Score=183.80 Aligned_cols=129 Identities=12% Similarity=0.085 Sum_probs=105.1
Q ss_pred CCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchh
Q 017455 181 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (371)
Q Consensus 181 ~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~ 260 (371)
....++||+.++|+.|+++|++++++||. ....+...++.+|+.++|+.++. ++++ .
T Consensus 93 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~---~~~~~~~~l~~~~l~~~f~~~~~-~~~~--------------~----- 149 (230)
T 3um9_A 93 LSLTPFADVPQALQQLRAAGLKTAILSNG---SRHSIRQVVGNSGLTNSFDHLIS-VDEV--------------R----- 149 (230)
T ss_dssp TSCCBCTTHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHHTCGGGCSEEEE-GGGT--------------T-----
T ss_pred hcCCCCCCHHHHHHHHHhCCCeEEEEeCC---CHHHHHHHHHHCCChhhcceeEe-hhhc--------------c-----
Confidence 34679999999999999999999999994 47788899999999999887533 2222 1
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcE
Q 017455 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (371)
Q Consensus 261 ~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~ 340 (371)
..||+|.+ |+.+++++|++|++|++|||+.+|+.+|+++|+.+
T Consensus 150 -----------------------~~kp~~~~--------------~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~ 192 (230)
T 3um9_A 150 -----------------------LFKPHQKV--------------YELAMDTLHLGESEILFVSCNSWDATGAKYFGYPV 192 (230)
T ss_dssp -----------------------CCTTCHHH--------------HHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCE
T ss_pred -----------------------cCCCChHH--------------HHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEE
Confidence 23777777 99999999999999999999999999999999999
Q ss_pred EEECCCCCCCccc-ccccccchHHHHhhhh
Q 017455 341 VVMRSRCITTLPV-SKTQRLADMLCRILKS 369 (371)
Q Consensus 341 v~v~~~~~~~~~l-~~~~~~~~~l~~~l~~ 369 (371)
+++.++......+ ..++.+++++.++++-
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 222 (230)
T 3um9_A 193 CWINRSNGVFDQLGVVPDIVVSDVGVLASR 222 (230)
T ss_dssp EEECTTSCCCCCSSCCCSEEESSHHHHHHT
T ss_pred EEEeCCCCccccccCCCcEEeCCHHHHHHH
Confidence 9999876554444 3566777776666543
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.90 E-value=5.6e-23 Score=188.07 Aligned_cols=209 Identities=12% Similarity=0.086 Sum_probs=142.0
Q ss_pred CCCCCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChH-HHHHHHHhhcCC-----------------hHHH
Q 017455 79 QNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAP-IYTDLLRKSAGD-----------------EDRM 140 (371)
Q Consensus 79 ~~~~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~-~~~~~~~~~~g~-----------------~~~~ 140 (371)
...|++|+|+||+||||+++... +..++.+++.++|.. .+.+ ....+.+..... ....
T Consensus 17 ~~~m~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (254)
T 3umc_A 17 LYFQGMRAILFDVFGTLVDWRSS-LIEQFQALERELGGT---LPCVELTDRWRQQYKPAMDRVRNGQAPWQHLDQLHRQS 92 (254)
T ss_dssp CCSSSCCEEEECCBTTTEEHHHH-HHHHHHHHHHHSSSC---CCHHHHHHHHHHHTHHHHHHHHTTSSCCCCHHHHHHHH
T ss_pred ccccCCcEEEEeCCCccEecCcc-HHHHHHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhcccCCcccHHHHHHHH
Confidence 34677999999999999998875 789999999999987 3333 223322210000 0001
Q ss_pred HHHHHHHcCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHH
Q 017455 141 LVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSV 220 (371)
Q Consensus 141 ~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~ 220 (371)
...++..++.... . .....+... .....++||+.++|+.|++. ++++++||. ....+..+
T Consensus 93 ~~~~~~~~~~~~~--~------------~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~---~~~~~~~~ 152 (254)
T 3umc_A 93 LEALAGEFGLALD--E------------ALLQRITGF--WHRLRPWPDTLAGMHALKAD-YWLAALSNG---NTALMLDV 152 (254)
T ss_dssp HHHHHHHTTCCCC--H------------HHHHHHHGG--GGSCEECTTHHHHHHHHTTT-SEEEECCSS---CHHHHHHH
T ss_pred HHHHHHHhCCCCC--H------------HHHHHHHHH--HhcCCCCccHHHHHHHHHhc-CeEEEEeCC---CHHHHHHH
Confidence 1112222222211 0 000111111 13466899999999999986 999999994 47778889
Q ss_pred HHHcCccccchheeecchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhH
Q 017455 221 VEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLD 300 (371)
Q Consensus 221 l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~ 300 (371)
++.+|+. |+.+ ++.+++ +..||+|++
T Consensus 153 l~~~g~~--f~~~-~~~~~~------------------------------------------~~~kp~~~~--------- 178 (254)
T 3umc_A 153 ARHAGLP--WDML-LCADLF------------------------------------------GHYKPDPQV--------- 178 (254)
T ss_dssp HHHHTCC--CSEE-CCHHHH------------------------------------------TCCTTSHHH---------
T ss_pred HHHcCCC--cceE-Eeeccc------------------------------------------ccCCCCHHH---------
Confidence 9999986 6653 333222 234788888
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEC----CCCCCCccc---ccccccchHHHHhhhhc
Q 017455 301 KIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR----SRCITTLPV---SKTQRLADMLCRILKSI 370 (371)
Q Consensus 301 ~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~----~~~~~~~~l---~~~~~~~~~l~~~l~~i 370 (371)
|+.+++++|++|++|++|||+.+|+.+|+.+||.+++++ ++......+ ..++.+++++.++++-|
T Consensus 179 -----~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~l 250 (254)
T 3umc_A 179 -----YLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQL 250 (254)
T ss_dssp -----HHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHHHH
T ss_pred -----HHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHHHHHh
Confidence 999999999999999999999999999999999999998 454444444 35677888777766543
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.6e-23 Score=184.70 Aligned_cols=189 Identities=16% Similarity=0.092 Sum_probs=134.3
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHH
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (371)
|++|+|+||+||||+++... |.++++++|+.. ..+....+.. .....
T Consensus 4 ~~~k~iifDlDGTL~d~~~~-----~~~~~~~~g~~~---~~~~~~~~~~----~~~~~--------------------- 50 (205)
T 3m9l_A 4 SEIKHWVFDMDGTLTIAVHD-----FAAIREALSIPA---EDDILTHLAA----LPADE--------------------- 50 (205)
T ss_dssp GGCCEEEECTBTTTEEEEEC-----HHHHHHHTTCCT---TSCHHHHHHH----SCHHH---------------------
T ss_pred ccCCEEEEeCCCcCcccHHH-----HHHHHHHhCCCc---hHHHHHHHhc----CChHH---------------------
Confidence 46899999999999998753 346777888873 2222222211 01100
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccc--hheeecchh
Q 017455 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS--KIKIVGNEE 239 (371)
Q Consensus 162 ~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f--~~~i~~~~~ 239 (371)
..........+.+.+ .....++||+.++|+.|+++|++++|+||. ....+...++.+|+.++| +.+ ++.+.
T Consensus 51 --~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~---~~~~~~~~l~~~~l~~~f~~~~i-~~~~~ 123 (205)
T 3m9l_A 51 --SAAKHAWLLEHERDL-AQGSRPAPGAVELVRELAGRGYRLGILTRN---ARELAHVTLEAIGLADCFAEADV-LGRDE 123 (205)
T ss_dssp --HHHHHHHHHHTHHHH-EEEEEECTTHHHHHHHHHHTTCEEEEECSS---CHHHHHHHHHHTTCGGGSCGGGE-ECTTT
T ss_pred --HHHHHHHHHHHHHHH-hhcCCCCccHHHHHHHHHhcCCeEEEEeCC---chHHHHHHHHHcCchhhcCcceE-EeCCC
Confidence 011112222222222 234668999999999999999999999994 478889999999999988 543 33221
Q ss_pred HHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCc
Q 017455 240 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRN 319 (371)
Q Consensus 240 ~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e 319 (371)
. ..||+|++ |+.+++++|++|++
T Consensus 124 ---------------~----------------------------~~kp~~~~--------------~~~~~~~~g~~~~~ 146 (205)
T 3m9l_A 124 ---------------A----------------------------PPKPHPGG--------------LLKLAEAWDVSPSR 146 (205)
T ss_dssp ---------------S----------------------------CCTTSSHH--------------HHHHHHHTTCCGGG
T ss_pred ---------------C----------------------------CCCCCHHH--------------HHHHHHHcCCCHHH
Confidence 1 22777777 99999999999999
Q ss_pred EEEEeCCHhhHHHHHHcCCcEEEECCCCCCCcccccccccchHHHHhhhh
Q 017455 320 CFLIAGSQSGVAGAQRIGMPCVVMRSRCITTLPVSKTQRLADMLCRILKS 369 (371)
Q Consensus 320 ~I~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l~~~~~~~~~l~~~l~~ 369 (371)
|++|||+.+|+.+|+.+|+++|++.++..... ..++.+++++.|++..
T Consensus 147 ~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~--~~ad~v~~~~~el~~~ 194 (205)
T 3m9l_A 147 MVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWP--ELTDWHARDCAQLRDL 194 (205)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEECSSSSCSCG--GGCSEECSSHHHHHHH
T ss_pred EEEECCCHHHHHHHHHcCCEEEEEeCCCCccc--ccCCEEeCCHHHHHHH
Confidence 99999999999999999999999988764322 3466777777776654
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-22 Score=186.54 Aligned_cols=188 Identities=12% Similarity=-0.038 Sum_probs=129.7
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHH---HcCCCCC-CCCh----HHHHHHHHhhcCChHHHHHHHH----HHcC
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQ---KLGLDCA-NWTA----PIYTDLLRKSAGDEDRMLVLFF----NRIG 149 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~---~~g~~~~-~~~~----~~~~~~~~~~~g~~~~~~~~~~----~~~g 149 (371)
|.+|+|+||+||||+|+... +..++.++++ ++|+... .... ..+... ...+.....+...+. ...+
T Consensus 11 M~~k~iifDlDGTL~d~~~~-~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~ 88 (251)
T 2pke_A 11 QAIQLVGFDGDDTLWKSEDY-YRTAEADFEAILSGYLDLGDSRMQQHLLAVERRNL-KIFGYGAKGMTLSMIETAIELTE 88 (251)
T ss_dssp CSCCEEEECCBTTTBCCHHH-HHHHHHHHHHHHTTTCCC-----CTTHHHHHHHHH-HHHCSSHHHHHHHHHHHHHHHTT
T ss_pred CceeEEEEeCCCCCccCcHh-HHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhh-hhccCcchHHHHHHHHHHHHhcC
Confidence 45799999999999999886 7788887774 5676520 0111 111111 112222232332222 2233
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcccc
Q 017455 150 WPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229 (371)
Q Consensus 150 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~ 229 (371)
.... . .......+.+.+.+ .....++||+.++|+.|+ +|++++|+||+ ........++.+|+.++
T Consensus 89 ~~~~------~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~-~~~~~~i~t~~---~~~~~~~~l~~~~l~~~ 153 (251)
T 2pke_A 89 ARIE------A----RDIQRIVEIGRATL-QHPVEVIAGVREAVAAIA-ADYAVVLITKG---DLFHQEQKIEQSGLSDL 153 (251)
T ss_dssp TCCC------H----HHHHHHHHHHHHHH-TCCCCBCTTHHHHHHHHH-TTSEEEEEEES---CHHHHHHHHHHHSGGGT
T ss_pred CCCC------h----HHHHHHHHHHHHHH-hccCCcCccHHHHHHHHH-CCCEEEEEeCC---CHHHHHHHHHHcCcHHh
Confidence 2211 1 22233334444444 345779999999999999 99999999994 46778889999999998
Q ss_pred chheeecchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHH
Q 017455 230 SKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAG 309 (371)
Q Consensus 230 f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a 309 (371)
|+.++.+ .||+|++ |+.+
T Consensus 154 f~~i~~~------------------------------------------------~kp~~~~--------------~~~~ 171 (251)
T 2pke_A 154 FPRIEVV------------------------------------------------SEKDPQT--------------YARV 171 (251)
T ss_dssp CCCEEEE------------------------------------------------SCCSHHH--------------HHHH
T ss_pred Cceeeee------------------------------------------------CCCCHHH--------------HHHH
Confidence 8765421 1677777 9999
Q ss_pred HHHcCCCCCcEEEEeCCH-hhHHHHHHcCCcEEEECCCCC
Q 017455 310 AEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCI 348 (371)
Q Consensus 310 ~~~lgv~p~e~I~IgDs~-~Di~aA~~aGm~~v~v~~~~~ 348 (371)
++++|++|++|++|||+. +|+.+|+++|+.+|++.++..
T Consensus 172 ~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~ 211 (251)
T 2pke_A 172 LSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVT 211 (251)
T ss_dssp HHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC--
T ss_pred HHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCc
Confidence 999999999999999999 999999999999999987654
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-22 Score=191.26 Aligned_cols=186 Identities=9% Similarity=0.040 Sum_probs=118.3
Q ss_pred CCceEEEEecCCcccccccc------CcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCC-hHHHHHHHHHHcCCCCCC
Q 017455 82 PRDLAVLLEVDGVLVDAYRF------GNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGD-EDRMLVLFFNRIGWPTSV 154 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~------~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~g~~~~~ 154 (371)
+++|+||||+||||+|++.. .+...+...+..+|.. ......+....|. ...+...+...++....
T Consensus 29 ~~ikaviFDlDGTLvDs~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~- 101 (253)
T 2g80_A 29 DNYSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRD------SPVSNILSQFHIDNKEQLQAHILELVAKDVK- 101 (253)
T ss_dssp CCCSEEEECCBTTTBCTHHHHHTHHHHHHHHHHHHHHSCCTT------SHHHHHHHTTCCCCHHHHHHHHHHHHHTTCC-
T ss_pred CCCcEEEEcCCCCcccccccchhhHHHHHHHHHHHHHHhcCc------HHHHHHHHHhhhccHHHHHHHHHHHHhcccc-
Confidence 34799999999999998642 0234445555555543 1222333333322 33344444444432211
Q ss_pred CcchhHHHHHHHHH-HHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHc--C------
Q 017455 155 PTNEKKAFVKNVLQ-EKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL--G------ 225 (371)
Q Consensus 155 ~~~~~~~~~~~l~~-~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~l--g------ 225 (371)
... .+.+.. .+...|... ....+++||+.++|+. |++++|+||+ ....+...++.+ |
T Consensus 102 -~~~----~~~~~~~~~~~~~~~~--~~~~~~~pgv~e~L~~----g~~l~i~Tn~---~~~~~~~~l~~~~~g~~~~~~ 167 (253)
T 2g80_A 102 -DPI----LKQLQGYVWAHGYESG--QIKAPVYADAIDFIKR----KKRVFIYSSG---SVKAQKLLFGYVQDPNAPAHD 167 (253)
T ss_dssp -CHH----HHHHHHHHHHHHHHTT--SCCBCCCHHHHHHHHH----CSCEEEECSS---CHHHHHHHHHSBCCTTCTTSC
T ss_pred -hHH----HHHHHHHHHHHHHHhC--cccCCCCCCHHHHHHc----CCEEEEEeCC---CHHHHHHHHHhhccccccccc
Confidence 100 111111 122222211 1246799999999988 8999999995 477788888876 4
Q ss_pred ---ccccchheeecchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHH
Q 017455 226 ---SERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKI 302 (371)
Q Consensus 226 ---l~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~ 302 (371)
+.++|+..+ +..+ +..||+|++
T Consensus 168 ~l~l~~~~~~~f-----------~~~~---------------------------------~g~KP~p~~----------- 192 (253)
T 2g80_A 168 SLDLNSYIDGYF-----------DINT---------------------------------SGKKTETQS----------- 192 (253)
T ss_dssp CBCCGGGCCEEE-----------CHHH---------------------------------HCCTTCHHH-----------
T ss_pred ccchHhhcceEE-----------eeec---------------------------------cCCCCCHHH-----------
Confidence 555554321 1000 012888888
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEECCC
Q 017455 303 VAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 346 (371)
Q Consensus 303 ~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~ 346 (371)
|+.+++++|++|++||||||+.+|+.+|+++||++|++.++
T Consensus 193 ---~~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v~~~ 233 (253)
T 2g80_A 193 ---YANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRP 233 (253)
T ss_dssp ---HHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCT
T ss_pred ---HHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEcCC
Confidence 99999999999999999999999999999999999999763
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.5e-23 Score=189.44 Aligned_cols=126 Identities=11% Similarity=0.124 Sum_probs=103.6
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHH
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~ 262 (371)
..++||+.++|+.|+++|++++|+||+ ....+...++.+|+.++|+.++. +++. .
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~---~~~~~~~~l~~~~l~~~f~~~~~-~~~~--------------~------- 152 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNG---NPQMLEIAVKSAGMSGLFDHVLS-VDAV--------------R------- 152 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESS---CHHHHHHHHHTTTCTTTCSEEEE-GGGT--------------T-------
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCC---CHHHHHHHHHHCCcHhhcCEEEE-eccc--------------C-------
Confidence 668999999999999999999999994 47788899999999999887533 2222 1
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 263 ~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
..||+|++ |+.+++++|++|++|++|||+.+|+.+|+.+|+.+++
T Consensus 153 ---------------------~~kp~~~~--------------~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~ 197 (233)
T 3umb_A 153 ---------------------LYKTAPAA--------------YALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFW 197 (233)
T ss_dssp ---------------------CCTTSHHH--------------HTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred ---------------------CCCcCHHH--------------HHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEE
Confidence 23788888 9999999999999999999999999999999999999
Q ss_pred ECCCCCCCcccc-cccccchHHHHhhh
Q 017455 343 MRSRCITTLPVS-KTQRLADMLCRILK 368 (371)
Q Consensus 343 v~~~~~~~~~l~-~~~~~~~~l~~~l~ 368 (371)
+.++......+. .++.+++++.++++
T Consensus 198 v~~~~~~~~~~~~~~~~v~~~~~el~~ 224 (233)
T 3umb_A 198 INRLGHPPEALDVAPAAAGHDMRDLLQ 224 (233)
T ss_dssp ECTTCCCCCSSSCCCSEEESSHHHHHH
T ss_pred EcCCCCCchhccCCCCEEECCHHHHHH
Confidence 988766555543 46667666666554
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-22 Score=187.94 Aligned_cols=193 Identities=15% Similarity=0.067 Sum_probs=133.2
Q ss_pred CCceEEEEecCCccccccc-cCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHH----------HHHHHcCC
Q 017455 82 PRDLAVLLEVDGVLVDAYR-FGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLV----------LFFNRIGW 150 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~-~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~----------~~~~~~g~ 150 (371)
|++|+|+||+||||+++.. . +..++.++++++|+. ++.+.+.... +........ .+...++.
T Consensus 4 m~ik~i~fDlDGTLld~~~~~-~~~~~~~~l~~~G~~---~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (267)
T 1swv_A 4 MKIEAVIFAWAGTTVDYGCFA-PLEVFMEIFHKRGVA---ITAEEARKPM---GLLKIDHVRALTEMPRIASEWNRVFRQ 76 (267)
T ss_dssp -CCCEEEECSBTTTBSTTCCT-THHHHHHHHHTTTCC---CCHHHHHTTT---TSCHHHHHHHHHHSHHHHHHHHHHHSS
T ss_pred CCceEEEEecCCCEEeCCCcc-HHHHHHHHHHHcCCC---CCHHHHHHHh---ccchHHHHHHhcccHHHHHHHHHHhCC
Confidence 5689999999999999876 4 678999999999986 3333322211 111111111 11223333
Q ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccc
Q 017455 151 PTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (371)
Q Consensus 151 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f 230 (371)
... ...+..+...+...+.+.+ .....++||+.++++.|+++|++++++||. ....+..+++.+|+..+|
T Consensus 77 ~~~------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~---~~~~~~~~l~~~~~~~~~ 146 (267)
T 1swv_A 77 LPT------EADIQEMYEEFEEILFAIL-PRYASPINGVKEVIASLRERGIKIGSTTGY---TREMMDIVAKEAALQGYK 146 (267)
T ss_dssp CCC------HHHHHHHHHHHHHHHHHHG-GGGCCBCTTHHHHHHHHHHTTCEEEEBCSS---CHHHHHHHHHHHHHTTCC
T ss_pred CCC------HHHHHHHHHHHHHHHHHhh-ccccccCccHHHHHHHHHHcCCeEEEEcCC---CHHHHHHHHHHcCCcccC
Confidence 322 1122333334444444333 234668999999999999999999999994 467788888888887775
Q ss_pred -hheeecchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHH
Q 017455 231 -KIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAG 309 (371)
Q Consensus 231 -~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a 309 (371)
+.+ ++.+ .+.. .||+|+. |+.+
T Consensus 147 ~~~~-~~~~--------------~~~~----------------------------~kp~~~~--------------~~~~ 169 (267)
T 1swv_A 147 PDFL-VTPD--------------DVPA----------------------------GRPYPWM--------------CYKN 169 (267)
T ss_dssp CSCC-BCGG--------------GSSC----------------------------CTTSSHH--------------HHHH
T ss_pred hHhe-ecCC--------------ccCC----------------------------CCCCHHH--------------HHHH
Confidence 543 2222 2222 2677777 9999
Q ss_pred HHHcCCCC-CcEEEEeCCHhhHHHHHHcCCcEEEECCCCC
Q 017455 310 AEYAEKPV-RNCFLIAGSQSGVAGAQRIGMPCVVMRSRCI 348 (371)
Q Consensus 310 ~~~lgv~p-~e~I~IgDs~~Di~aA~~aGm~~v~v~~~~~ 348 (371)
++++|++| ++|++|||+.+|+.+|+.+|+.+|++..+..
T Consensus 170 ~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~ 209 (267)
T 1swv_A 170 AMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSS 209 (267)
T ss_dssp HHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCT
T ss_pred HHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCC
Confidence 99999999 9999999999999999999999999988764
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.6e-22 Score=184.52 Aligned_cols=124 Identities=10% Similarity=0.175 Sum_probs=99.5
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHH
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~ 262 (371)
.+++||+.++|+.|+++|++++|+||+ ....+...++.+|+..+|+.++. ++++.
T Consensus 104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~---~~~~~~~~l~~~~l~~~f~~~~~-~~~~~--------------------- 158 (240)
T 2no4_A 104 LSAYPDAAETLEKLKSAGYIVAILSNG---NDEMLQAALKASKLDRVLDSCLS-ADDLK--------------------- 158 (240)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHTTCGGGCSEEEE-GGGTT---------------------
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCC---CHHHHHHHHHhcCcHHHcCEEEE-ccccC---------------------
Confidence 679999999999999999999999994 47788899999999999887543 22221
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 263 ~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
..||+|++ |+.+++++|++|++|++|||+.+|+.+|+++||.+++
T Consensus 159 ---------------------~~Kp~~~~--------------~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~ 203 (240)
T 2no4_A 159 ---------------------IYKPDPRI--------------YQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVR 203 (240)
T ss_dssp ---------------------CCTTSHHH--------------HHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred ---------------------CCCCCHHH--------------HHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEE
Confidence 23788877 9999999999999999999999999999999999999
Q ss_pred ECCCCCCCccc-ccc-cccchHHHHhh
Q 017455 343 MRSRCITTLPV-SKT-QRLADMLCRIL 367 (371)
Q Consensus 343 v~~~~~~~~~l-~~~-~~~~~~l~~~l 367 (371)
+.++.. ...+ ..+ +.+++++.+++
T Consensus 204 v~~~~~-~~~~~~~~~~~~~~~~~el~ 229 (240)
T 2no4_A 204 INRQGN-PPEYEFAPLKHQVNSLSELW 229 (240)
T ss_dssp ECTTCC-CCCCTTSCCSEEESSGGGHH
T ss_pred ECCCCC-CCcccCCCCceeeCCHHHHH
Confidence 987755 2222 234 55555544443
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-22 Score=184.61 Aligned_cols=186 Identities=17% Similarity=0.142 Sum_probs=128.7
Q ss_pred CceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHH------hhcC--ChHHHHHHHHHHcCCCCCC
Q 017455 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLR------KSAG--DEDRMLVLFFNRIGWPTSV 154 (371)
Q Consensus 83 ~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~------~~~g--~~~~~~~~~~~~~g~~~~~ 154 (371)
.+|+|+||+||||+++.. ..+.+.+.++|++ ...+.+..+.. ...| ....+...+...++....
T Consensus 27 ~ik~viFD~DGTL~d~~~----~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~- 98 (229)
T 4dcc_A 27 GIKNLLIDLGGVLINLDR----ERCIENFKKIGFQ---NIEEKFCTHQLDGIFLQQEKGLITPAEFRDGIREMMGKMVS- 98 (229)
T ss_dssp CCCEEEECSBTTTBCBCH----HHHHHHHHHHTCT---THHHHHHHTHHHHHHHHHHTTCSCHHHHHHHHHHHHTSCCC-
T ss_pred CCCEEEEeCCCeEEeCCh----HHHHHHHHHhCCC---cHHHHHHHhcCcHHHHHHHCCCCCHHHHHHHHHHHhCCCCC-
Confidence 479999999999999763 5666778888886 22233222111 1111 223344445555554432
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHH------HHcCccc
Q 017455 155 PTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVV------EKLGSER 228 (371)
Q Consensus 155 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l------~~lgl~~ 228 (371)
.+...+.+.+. ...++||+.++|+.|+++ ++++|+||+. ......++ +.+|+.+
T Consensus 99 ------------~~~~~~~~~~~----~~~~~~~~~~~l~~l~~~-~~~~i~Sn~~---~~~~~~~~~~l~~~~~~~l~~ 158 (229)
T 4dcc_A 99 ------------DKQIDAAWNSF----LVDIPTYKLDLLLKLREK-YVVYLLSNTN---DIHWKWVCKNAFPYRTFKVED 158 (229)
T ss_dssp ------------HHHHHHHHHTT----BCCCCHHHHHHHHHHTTT-SEEEEEECCC---HHHHHHHHHHTSCBTTBCHHH
T ss_pred ------------HHHHHHHHHHH----HHhccHHHHHHHHHHHhc-CcEEEEECCC---hHHHHHHHhhhhhhccCCHHH
Confidence 11122222222 234789999999999998 9999999953 66666444 6678888
Q ss_pred cchheeecchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHH
Q 017455 229 ISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRA 308 (371)
Q Consensus 229 ~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~ 308 (371)
+|+.++. ++++ +..||+|++ |+.
T Consensus 159 ~fd~i~~-~~~~------------------------------------------~~~KP~~~~--------------~~~ 181 (229)
T 4dcc_A 159 YFEKTYL-SYEM------------------------------------------KMAKPEPEI--------------FKA 181 (229)
T ss_dssp HCSEEEE-HHHH------------------------------------------TCCTTCHHH--------------HHH
T ss_pred hCCEEEe-eccc------------------------------------------CCCCCCHHH--------------HHH
Confidence 8886433 2222 234888888 999
Q ss_pred HHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEECCCCCCCccc
Q 017455 309 GAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSRCITTLPV 353 (371)
Q Consensus 309 a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l 353 (371)
+++++|++|++||+|||+.+||.+|+++||.+|+++++....+.+
T Consensus 182 ~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~~k~~L 226 (229)
T 4dcc_A 182 VTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAGEDWSHLF 226 (229)
T ss_dssp HHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCCGGGGG
T ss_pred HHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCHHHHHHHh
Confidence 999999999999999999999999999999999999876544443
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.5e-22 Score=183.25 Aligned_cols=127 Identities=13% Similarity=0.108 Sum_probs=102.7
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHH
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~ 262 (371)
..++||+.++|+.|+++|++++|+||+ ....+...++.+|+..+|+.++.+ +++.
T Consensus 94 ~~~~~~~~~~l~~l~~~g~~~~i~t~~---~~~~~~~~l~~~~l~~~f~~~~~~-~~~~--------------------- 148 (232)
T 1zrn_A 94 LAPFSEVPDSLRELKRRGLKLAILSNG---SPQSIDAVVSHAGLRDGFDHLLSV-DPVQ--------------------- 148 (232)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHTTCGGGCSEEEES-GGGT---------------------
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHHHhcChHhhhheEEEe-cccC---------------------
Confidence 568999999999999999999999994 477888999999999988875433 2221
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 263 ~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
..||+|++ |+.+++++|++|++|++|||+.+|+.+|+++||.+++
T Consensus 149 ---------------------~~Kp~~~~--------------~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~ 193 (232)
T 1zrn_A 149 ---------------------VYKPDNRV--------------YELAEQALGLDRSAILFVASNAWDATGARYFGFPTCW 193 (232)
T ss_dssp ---------------------CCTTSHHH--------------HHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEE
T ss_pred ---------------------CCCCCHHH--------------HHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEE
Confidence 23788887 9999999999999999999999999999999999999
Q ss_pred ECCCCCCCccc-ccccccchHHHHhhhh
Q 017455 343 MRSRCITTLPV-SKTQRLADMLCRILKS 369 (371)
Q Consensus 343 v~~~~~~~~~l-~~~~~~~~~l~~~l~~ 369 (371)
+.++......+ ..++.+++++.++++.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~el~~~ 221 (232)
T 1zrn_A 194 INRTGNVFEEMGQTPDWEVTSLRAVVEL 221 (232)
T ss_dssp ECTTCCCCCSSSCCCSEEESSHHHHHTT
T ss_pred EcCCCCCccccCCCCCEEECCHHHHHHH
Confidence 98765443333 3456677776666543
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.3e-22 Score=180.26 Aligned_cols=208 Identities=13% Similarity=0.068 Sum_probs=136.7
Q ss_pred ceEEEEecCCccccccccCcHHHHHHHHH---HcCCCCCCCChHHHHHHHHhhc-------CCh----HHHHHHHHHHcC
Q 017455 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQ---KLGLDCANWTAPIYTDLLRKSA-------GDE----DRMLVLFFNRIG 149 (371)
Q Consensus 84 ~kaviFD~DGTL~d~~~~~~~~a~~~~~~---~~g~~~~~~~~~~~~~~~~~~~-------g~~----~~~~~~~~~~~g 149 (371)
+|+|+||+||||+++... +..++..++. ..+......+...+..+..... ... ......++...|
T Consensus 2 ik~i~fDlDGTL~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (230)
T 3vay_A 2 IKLVTFDLDDTLWDTAPA-IVGAEAALRDWLAEQAPKLGPVPVEHLWEIRSRLLDEDPSFKHRISALRRRVLFHALEDAG 80 (230)
T ss_dssp CCEEEECCBTTTBCSHHH-HHHHHHHHHHHHHHHCTTTCSCCHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHHTTT
T ss_pred eeEEEecCcccCcCCchH-HHHHHHHHHHHHHHhcCcchhhHHHHHHHHHHHHHHhCccccccHHHHHHHHHHHHHHHhC
Confidence 689999999999998864 5555544433 3343322334444443322110 000 112223344445
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcccc
Q 017455 150 WPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229 (371)
Q Consensus 150 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~ 229 (371)
++ ......+.....+.+.+.. ....++||+.++|+.|+++ ++++++||.. .. ++.+|+.++
T Consensus 81 ~~--------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~---~~-----l~~~~l~~~ 141 (230)
T 3vay_A 81 YD--------SDEAQQLADESFEVFLHGR--HQVQIFPEVQPTLEILAKT-FTLGVITNGN---AD-----VRRLGLADY 141 (230)
T ss_dssp CC--------HHHHHHHHHHHHHHHHHHH--TCCCBCTTHHHHHHHHHTT-SEEEEEESSC---CC-----GGGSTTGGG
T ss_pred CC--------hhhhHHHHHHHHHHHHHhh--ccCccCcCHHHHHHHHHhC-CeEEEEECCc---hh-----hhhcCcHHH
Confidence 43 1122334444444444433 3578999999999999998 9999999964 22 678899998
Q ss_pred chheeecchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHH
Q 017455 230 SKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAG 309 (371)
Q Consensus 230 f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a 309 (371)
|+.++. +++. +..||+|++ |+.+
T Consensus 142 f~~~~~-~~~~------------------------------------------~~~kp~~~~--------------~~~~ 164 (230)
T 3vay_A 142 FAFALC-AEDL------------------------------------------GIGKPDPAP--------------FLEA 164 (230)
T ss_dssp CSEEEE-HHHH------------------------------------------TCCTTSHHH--------------HHHH
T ss_pred eeeeEE-cccc------------------------------------------CCCCcCHHH--------------HHHH
Confidence 887533 2222 133788888 9999
Q ss_pred HHHcCCCCCcEEEEeCCH-hhHHHHHHcCCcEEEECCCCCCCcccccccccchHHHHhhh
Q 017455 310 AEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCITTLPVSKTQRLADMLCRILK 368 (371)
Q Consensus 310 ~~~lgv~p~e~I~IgDs~-~Di~aA~~aGm~~v~v~~~~~~~~~l~~~~~~~~~l~~~l~ 368 (371)
++++|++|++|++|||+. +|+.+|+++|+.++++.++.........++.+++++.++++
T Consensus 165 ~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~ 224 (230)
T 3vay_A 165 LRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPE 224 (230)
T ss_dssp HHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHH
T ss_pred HHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHH
Confidence 999999999999999998 99999999999999998876654443455666555554443
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.6e-23 Score=183.45 Aligned_cols=186 Identities=15% Similarity=0.185 Sum_probs=125.9
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHH-h-hcCChHHHHHHHHHHcCCCCCCCcchh
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLR-K-SAGDEDRMLVLFFNRIGWPTSVPTNEK 159 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~-~-~~g~~~~~~~~~~~~~g~~~~~~~~~~ 159 (371)
|++|+|+||+||||+++.. ...++..+++++|+.. ........... . ..+... ...++.++........ .
T Consensus 2 M~~k~viFDlDGTL~d~~~--~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~- 73 (200)
T 3cnh_A 2 MTIKALFWDIGGVLLTNGW--DREQRADVAQRFGLDT--DDFTERHRLAAPELELGRMT--LAEYLEQVVFYQPRDF-T- 73 (200)
T ss_dssp CCCCEEEECCBTTTBCCSS--CHHHHHHHHHHHTCCH--HHHHHHHHHHHHHHHTTSSC--HHHHHHHHTTTSCCSS-C-
T ss_pred CCceEEEEeCCCeeECCCc--chHHHHHHHHHcCCCH--HHHHHHHHhhchHHHcCCcC--HHHHHHHHHHHcCCCC-C-
Confidence 5689999999999999875 4678888999999862 11111111110 0 011100 0111222111100000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchh
Q 017455 160 KAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEE 239 (371)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~ 239 (371)
.. .+.+.+.. ...++||+.++|+.|+++| +++|+||+ ....+...++.+|+.++|+.++. +++
T Consensus 74 -------~~----~~~~~~~~-~~~~~~~~~~~l~~l~~~g-~~~i~s~~---~~~~~~~~l~~~~~~~~f~~~~~-~~~ 136 (200)
T 3cnh_A 74 -------PE----DFRAVMEE-QSQPRPEVLALARDLGQRY-RMYSLNNE---GRDLNEYRIRTFGLGEFLLAFFT-SSA 136 (200)
T ss_dssp -------HH----HHHHHHHH-TCCBCHHHHHHHHHHTTTS-EEEEEECC---CHHHHHHHHHHHTGGGTCSCEEE-HHH
T ss_pred -------HH----HHHHHHHh-cCccCccHHHHHHHHHHcC-CEEEEeCC---cHHHHHHHHHhCCHHHhcceEEe-ecc
Confidence 01 11222112 2459999999999999999 99999994 47788899999999999887543 222
Q ss_pred HHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCc
Q 017455 240 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRN 319 (371)
Q Consensus 240 ~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e 319 (371)
+ +..||+|++ |+.+++++|++|++
T Consensus 137 ~------------------------------------------~~~Kp~~~~--------------~~~~~~~~~~~~~~ 160 (200)
T 3cnh_A 137 L------------------------------------------GVMKPNPAM--------------YRLGLTLAQVRPEE 160 (200)
T ss_dssp H------------------------------------------SCCTTCHHH--------------HHHHHHHHTCCGGG
T ss_pred c------------------------------------------CCCCCCHHH--------------HHHHHHHcCCCHHH
Confidence 2 133788888 99999999999999
Q ss_pred EEEEeCCHhhHHHHHHcCCcEEEECCCCC
Q 017455 320 CFLIAGSQSGVAGAQRIGMPCVVMRSRCI 348 (371)
Q Consensus 320 ~I~IgDs~~Di~aA~~aGm~~v~v~~~~~ 348 (371)
|++|||+.+|+.+|+++||.+|++.++..
T Consensus 161 ~~~vgD~~~Di~~a~~aG~~~~~~~~~~~ 189 (200)
T 3cnh_A 161 AVMVDDRLQNVQAARAVGMHAVQCVDAAQ 189 (200)
T ss_dssp EEEEESCHHHHHHHHHTTCEEEECSCHHH
T ss_pred eEEeCCCHHHHHHHHHCCCEEEEECCchh
Confidence 99999999999999999999999987644
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=99.88 E-value=7.9e-22 Score=177.88 Aligned_cols=125 Identities=14% Similarity=0.200 Sum_probs=102.3
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHH
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~ 262 (371)
..++||+.++|+.|+++ ++++++||. ........++.+|+.++|+.++. +++.
T Consensus 99 ~~~~~~~~~~l~~l~~~-~~~~i~t~~---~~~~~~~~l~~~~~~~~f~~~~~-~~~~---------------------- 151 (234)
T 3u26_A 99 GELYPEVVEVLKSLKGK-YHVGMITDS---DTEQAMAFLDALGIKDLFDSITT-SEEA---------------------- 151 (234)
T ss_dssp CCBCTTHHHHHHHHTTT-SEEEEEESS---CHHHHHHHHHHTTCGGGCSEEEE-HHHH----------------------
T ss_pred CCcCcCHHHHHHHHHhC-CcEEEEECC---CHHHHHHHHHHcCcHHHcceeEe-cccc----------------------
Confidence 56899999999999999 999999994 47788899999999999987533 3222
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCcEE
Q 017455 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCV 341 (371)
Q Consensus 263 ~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~-~Di~aA~~aGm~~v 341 (371)
+..||+|++ |+.+++++|++|++|++|||+. +|+.+|+.+|+.++
T Consensus 152 --------------------~~~kp~~~~--------------~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~ 197 (234)
T 3u26_A 152 --------------------GFFKPHPRI--------------FELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSI 197 (234)
T ss_dssp --------------------TBCTTSHHH--------------HHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEE
T ss_pred --------------------CCCCcCHHH--------------HHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEE
Confidence 123788888 9999999999999999999998 99999999999999
Q ss_pred EECCCCCCCcccccccccchHHHHhhh
Q 017455 342 VMRSRCITTLPVSKTQRLADMLCRILK 368 (371)
Q Consensus 342 ~v~~~~~~~~~l~~~~~~~~~l~~~l~ 368 (371)
++..+.........++.+++++.++++
T Consensus 198 ~v~~~~~~~~~~~~a~~~~~~~~el~~ 224 (234)
T 3u26_A 198 LLDRKGEKREFWDKCDFIVSDLREVIK 224 (234)
T ss_dssp EECSSSTTGGGGGGCSEEESSTHHHHH
T ss_pred EECCCCCccccccCCCEeeCCHHHHHH
Confidence 999886655555566776655555443
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=99.88 E-value=5.5e-22 Score=173.85 Aligned_cols=179 Identities=15% Similarity=0.111 Sum_probs=128.6
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHH
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (371)
|.+|+|+||+||||+|+... +..++.++++++|+. .+.+.+...... .... .+...++-..
T Consensus 4 M~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~---~~~~---~~~~~~~~~~--------- 64 (190)
T 2fi1_A 4 MKYHDYIWDLGGTLLDNYET-STAAFVETLALYGIT---QDHDSVYQALKV---STPF---AIETFAPNLE--------- 64 (190)
T ss_dssp CCCSEEEECTBTTTBCHHHH-HHHHHHHHHHHTTCC---CCHHHHHHHHHH---CHHH---HHHHHCTTCT---------
T ss_pred CcccEEEEeCCCCcCCCHHH-HHHHHHHHHHHhCCC---CCHHHHHHHHcc---ccHH---HHHHHhhhHH---------
Confidence 45799999999999998876 788999999999986 444444433321 1111 2223332110
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHH
Q 017455 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (371)
Q Consensus 162 ~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~ 241 (371)
.+...+.+.+.+.. ... .++||+.++|+.|+++|++++++||.. ..+...++.+|+.++|+.++ ++++
T Consensus 65 ---~~~~~~~~~~~~~~-~~~-~~~~~~~~~l~~l~~~g~~~~i~t~~~----~~~~~~l~~~~~~~~f~~~~-~~~~-- 132 (190)
T 2fi1_A 65 ---NFLEKYKENEAREL-EHP-ILFEGVSDLLEDISNQGGRHFLVSHRN----DQVLEILEKTSIAAYFTEVV-TSSS-- 132 (190)
T ss_dssp ---THHHHHHHHHHHHT-TSC-CBCTTHHHHHHHHHHTTCEEEEECSSC----THHHHHHHHTTCGGGEEEEE-CGGG--
T ss_pred ---HHHHHHHHHHHHhc-CcC-ccCcCHHHHHHHHHHCCCcEEEEECCc----HHHHHHHHHcCCHhheeeee-eccc--
Confidence 11223333344433 223 389999999999999999999999942 35778899999998887643 2222
Q ss_pred hhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 017455 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (371)
Q Consensus 242 ~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I 321 (371)
+. ..||+|++ |+.+++++|++ +|+
T Consensus 133 ------------~~----------------------------~~kp~~~~--------------~~~~~~~~~~~--~~~ 156 (190)
T 2fi1_A 133 ------------GF----------------------------KRKPNPES--------------MLYLREKYQIS--SGL 156 (190)
T ss_dssp ------------CC----------------------------CCTTSCHH--------------HHHHHHHTTCS--SEE
T ss_pred ------------cC----------------------------CCCCCHHH--------------HHHHHHHcCCC--eEE
Confidence 21 22777777 99999999998 999
Q ss_pred EEeCCHhhHHHHHHcCCcEEEECCCC
Q 017455 322 LIAGSQSGVAGAQRIGMPCVVMRSRC 347 (371)
Q Consensus 322 ~IgDs~~Di~aA~~aGm~~v~v~~~~ 347 (371)
+|||+.+|+.+|+.+|+.++++.++.
T Consensus 157 ~iGD~~~Di~~a~~aG~~~~~~~~~~ 182 (190)
T 2fi1_A 157 VIGDRPIDIEAGQAAGLDTHLFTSIV 182 (190)
T ss_dssp EEESSHHHHHHHHHTTCEEEECSCHH
T ss_pred EEcCCHHHHHHHHHcCCeEEEECCCC
Confidence 99999999999999999999998653
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.88 E-value=8.9e-22 Score=176.97 Aligned_cols=185 Identities=17% Similarity=0.186 Sum_probs=133.3
Q ss_pred CceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCC-hHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHH
Q 017455 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWT-APIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (371)
Q Consensus 83 ~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (371)
++|+|+||+||||+++... +..++.++++++|.. .+ .+.+..+. +.....+...+...++.... . .
T Consensus 3 ~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~--~----~ 69 (229)
T 2fdr_A 3 GFDLIIFDCDGVLVDSEII-AAQVESRLLTEAGYP---ISVEEMGERFA---GMTWKNILLQVESEASIPLS--A----S 69 (229)
T ss_dssp CCSEEEECSBTTTBCCHHH-HHHHHHHHHHHTTCC---CCHHHHHHHHT---TCCHHHHHHHHHHHHCCCCC--T----H
T ss_pred CccEEEEcCCCCcCccHHH-HHHHHHHHHHHhCCC---CCHHHHHHHHh---CCCHHHHHHHHHHHcCCCCC--H----H
Confidence 3789999999999999876 788899999999986 34 23333322 22334455566666665432 1 1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccc-hheeecchhH
Q 017455 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS-KIKIVGNEEV 240 (371)
Q Consensus 162 ~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f-~~~i~~~~~~ 240 (371)
... ...+.+.+... ....++||+.++|+.++. +++++||. ....+...++.+|+..+| +.+ ++.+++
T Consensus 70 ~~~----~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~---~~~i~s~~---~~~~~~~~l~~~~l~~~~~~~~-~~~~~~ 137 (229)
T 2fdr_A 70 LLD----KSEKLLDMRLE-RDVKIIDGVKFALSRLTT---PRCICSNS---SSHRLDMMLTKVGLKPYFAPHI-YSAKDL 137 (229)
T ss_dssp HHH----HHHHHHHHHHH-HHCCBCTTHHHHHHHCCS---CEEEEESS---CHHHHHHHHHHTTCGGGTTTCE-EEHHHH
T ss_pred HHH----HHHHHHHHHhh-cCCccCcCHHHHHHHhCC---CEEEEECC---ChhHHHHHHHhCChHHhccceE-Eecccc
Confidence 112 22223322221 235689999999988874 99999994 477888899999999988 654 333222
Q ss_pred HhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhc--cCccccCCCCCchhHHHHHHHHHHHHHcCCCCC
Q 017455 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASML--KLSVDIDTSSPESLDKIVAALRAGAEYAEKPVR 318 (371)
Q Consensus 241 ~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~--KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~ 318 (371)
+.. ||+|.. |+.+++++|++|+
T Consensus 138 ------------------------------------------~~~~~kpk~~~--------------~~~~~~~l~~~~~ 161 (229)
T 2fdr_A 138 ------------------------------------------GADRVKPKPDI--------------FLHGAAQFGVSPD 161 (229)
T ss_dssp ------------------------------------------CTTCCTTSSHH--------------HHHHHHHHTCCGG
T ss_pred ------------------------------------------ccCCCCcCHHH--------------HHHHHHHcCCChh
Confidence 133 666666 9999999999999
Q ss_pred cEEEEeCCHhhHHHHHHcCCcEEEECCCCC
Q 017455 319 NCFLIAGSQSGVAGAQRIGMPCVVMRSRCI 348 (371)
Q Consensus 319 e~I~IgDs~~Di~aA~~aGm~~v~v~~~~~ 348 (371)
+|++|||+.+|+.+|+.+|+.+|++.++..
T Consensus 162 ~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~ 191 (229)
T 2fdr_A 162 RVVVVEDSVHGIHGARAAGMRVIGFTGASH 191 (229)
T ss_dssp GEEEEESSHHHHHHHHHTTCEEEEECCSTT
T ss_pred HeEEEcCCHHHHHHHHHCCCEEEEEecCCc
Confidence 999999999999999999999999987754
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-22 Score=180.78 Aligned_cols=122 Identities=15% Similarity=0.167 Sum_probs=97.3
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHH
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~ 262 (371)
..++||+.+ |+.|+++ ++++|+||. ....+...++.+|+.++|+.++ +++++.
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~---~~~~~~~~l~~~~l~~~f~~~~-~~~~~~--------------------- 125 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSNG---SINEVKQHLERNGLLRYFKGIF-SAESVK--------------------- 125 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEESS---CHHHHHHHHHHTTCGGGCSEEE-EGGGGT---------------------
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeCc---CHHHHHHHHHHCCcHHhCcEEE-ehhhcC---------------------
Confidence 568999999 9999999 999999994 4778889999999999988743 332221
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 263 ~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
..||+|++ |+.+++++| |++|++|||+.+|+.+|+++||.+++
T Consensus 126 ---------------------~~Kp~~~~--------------~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~ 168 (201)
T 2w43_A 126 ---------------------EYKPSPKV--------------YKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIF 168 (201)
T ss_dssp ---------------------CCTTCHHH--------------HHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEE
T ss_pred ---------------------CCCCCHHH--------------HHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEE
Confidence 23788887 999999999 99999999999999999999999999
Q ss_pred ECCCCCCCccc-ccccccchHHHHhhh
Q 017455 343 MRSRCITTLPV-SKTQRLADMLCRILK 368 (371)
Q Consensus 343 v~~~~~~~~~l-~~~~~~~~~l~~~l~ 368 (371)
+.++......+ ..++.+++++.++++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~el~~ 195 (201)
T 2w43_A 169 VNRKNTIVDPIGGKPDVIVNDFKELYE 195 (201)
T ss_dssp ECSSSCCCCTTSCCCSEEESSHHHHHH
T ss_pred ECCCCCCccccCCCCCEEECCHHHHHH
Confidence 98865443322 245666666655544
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-21 Score=183.98 Aligned_cols=211 Identities=10% Similarity=0.070 Sum_probs=133.7
Q ss_pred CCCceEEEEecCCccccccccCcHHHHHHHHHHc-----CCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCC
Q 017455 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKL-----GLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVP 155 (371)
Q Consensus 81 ~~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~-----g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~ 155 (371)
.+.+|+|+||+||||+++... +..++.+++.++ |+. .+...................+....++..
T Consensus 54 ~~~~k~i~FDlDGTL~d~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--- 124 (282)
T 3nuq_A 54 NPNLKVFFFDIDNCLYKSSTR-IHDLMQQSILRFFQTHLKLS-----PEDAHVLNNSYYKEYGLAIRGLVMFHKVNA--- 124 (282)
T ss_dssp -CCCCEEEECCTTTTSCCCHH-HHHHHHHHHHHHHHHCTTSC-----HHHHHHHHHHHHHHTHHHHHHHHHTTSSCH---
T ss_pred CCCCCEEEEecCCCcccCCcc-HHHHHHHHHHHHHHHhcCCC-----HHHHHHHHHHHHHHHhhhHHHHHHHcCCCH---
Confidence 345899999999999998764 566666666553 543 222222211000000011112333333320
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHh-cCCCCCCccHHHHHHHHHHCCC--cEEEEcCCCCCCcHHHHHHHHHcCccccchh
Q 017455 156 TNEKKAFVKNVLQEKKNALDEFLA-SKDAPLRPGVEDFVDDAYNEGI--PLIVLTAYGKSGDRIARSVVEKLGSERISKI 232 (371)
Q Consensus 156 ~~~~~~~~~~l~~~~~~~~~~~l~-~~~~~~~pgv~elL~~L~~~Gi--~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~ 232 (371)
..+.+.+..... .....++||+.++|+.|+++|+ +++|+||+ ....+...++.+|+.++|+.
T Consensus 125 ------------~~~~~~~~~~~~~~~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~---~~~~~~~~l~~~gl~~~fd~ 189 (282)
T 3nuq_A 125 ------------LEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNA---YKNHAIRCLRLLGIADLFDG 189 (282)
T ss_dssp ------------HHHHHHHTTTSCGGGTCCCCHHHHHHHHHHHHSSSCSEEEEECSS---CHHHHHHHHHHHTCTTSCSE
T ss_pred ------------HHHHHHHhhhhhhhhccCcChhHHHHHHHHHhCCCCceEEEEECC---ChHHHHHHHHhCCcccccce
Confidence 111111111110 1247799999999999999999 99999994 47888999999999999987
Q ss_pred eeecchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHH
Q 017455 233 KIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEY 312 (371)
Q Consensus 233 ~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~ 312 (371)
++.+. +. +..+. ..||+|++ |+.++++
T Consensus 190 v~~~~-~~----------~~~~~----------------------------~~Kp~~~~--------------~~~~~~~ 216 (282)
T 3nuq_A 190 LTYCD-YS----------RTDTL----------------------------VCKPHVKA--------------FEKAMKE 216 (282)
T ss_dssp EECCC-CS----------SCSSC----------------------------CCTTSHHH--------------HHHHHHH
T ss_pred EEEec-cC----------CCccc----------------------------CCCcCHHH--------------HHHHHHH
Confidence 54332 11 11111 22677777 9999999
Q ss_pred cCCCC-CcEEEEeCCHhhHHHHHHcCC-cEEEECCCCCCCc--ccccccccchHHHHhhh
Q 017455 313 AEKPV-RNCFLIAGSQSGVAGAQRIGM-PCVVMRSRCITTL--PVSKTQRLADMLCRILK 368 (371)
Q Consensus 313 lgv~p-~e~I~IgDs~~Di~aA~~aGm-~~v~v~~~~~~~~--~l~~~~~~~~~l~~~l~ 368 (371)
+|++| ++||+|||+.+|+.+|+++|| .++++..+..... ....++.+++++.++.+
T Consensus 217 lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~~ 276 (282)
T 3nuq_A 217 SGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPH 276 (282)
T ss_dssp HTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGGGG
T ss_pred cCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHHHH
Confidence 99999 999999999999999999999 6777776554321 12345566666555544
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.87 E-value=5.6e-22 Score=186.19 Aligned_cols=201 Identities=12% Similarity=0.078 Sum_probs=136.1
Q ss_pred CceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHH-HHHHHHHHcCCCCCCCcchhHH
Q 017455 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDR-MLVLFFNRIGWPTSVPTNEKKA 161 (371)
Q Consensus 83 ~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~g~~~~~~~~~~~~ 161 (371)
++|+|+||+||||+++... +..+|.++++++|.. +.. .......|.... ....+... ... ..
T Consensus 34 ~ik~iifDlDGTLlds~~~-~~~~~~~~~~~~g~~----~~~---~~~~~~~G~~~~~~~~~~~~~-----~~~----~~ 96 (275)
T 2qlt_A 34 KINAALFDVDGTIIISQPA-IAAFWRDFGKDKPYF----DAE---HVIHISHGWRTYDAIAKFAPD-----FAD----EE 96 (275)
T ss_dssp EESEEEECCBTTTEECHHH-HHHHHHHHHTTCTTC----CHH---HHHHHCTTCCHHHHHHHHCGG-----GCC----HH
T ss_pred cCCEEEECCCCCCCCCHHH-HHHHHHHHHHHcCCC----CHH---HHHHHhcCCCHHHHHHHHhcc-----CCc----HH
Confidence 3699999999999999876 788899999888831 112 222223343322 22222111 001 11
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHC-CCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhH
Q 017455 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNE-GIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 240 (371)
Q Consensus 162 ~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~-Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~ 240 (371)
.+ ......+.+.+ .....++||+.++|+.|+++ |++++++||. ....+...++.+|+.. |+.+ +++++
T Consensus 97 ~~----~~~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~---~~~~~~~~l~~~~l~~-f~~i-~~~~~- 165 (275)
T 2qlt_A 97 YV----NKLEGEIPEKY-GEHSIEVPGAVKLCNALNALPKEKWAVATSG---TRDMAKKWFDILKIKR-PEYF-ITAND- 165 (275)
T ss_dssp HH----HHHHHTHHHHH-CTTCEECTTHHHHHHHHHTSCGGGEEEECSS---CHHHHHHHHHHHTCCC-CSSE-ECGGG-
T ss_pred HH----HHHHHHHHHHH-hcCCCcCcCHHHHHHHHHhccCCeEEEEeCC---CHHHHHHHHHHcCCCc-cCEE-EEccc-
Confidence 22 22223333333 23466899999999999999 9999999994 4778888899998864 5553 33322
Q ss_pred HhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCC-----
Q 017455 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK----- 315 (371)
Q Consensus 241 ~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv----- 315 (371)
+.. .||+|++ |+.+++++|+
T Consensus 166 -------------~~~----------------------------~kp~~~~--------------~~~~~~~lgi~~~~~ 190 (275)
T 2qlt_A 166 -------------VKQ----------------------------GKPHPEP--------------YLKGRNGLGFPINEQ 190 (275)
T ss_dssp -------------CSS----------------------------CTTSSHH--------------HHHHHHHTTCCCCSS
T ss_pred -------------CCC----------------------------CCCChHH--------------HHHHHHHcCCCcccc
Confidence 221 2777777 9999999999
Q ss_pred --CCCcEEEEeCCHhhHHHHHHcCCcEEEECCCCCCCcccc-cccccchHHHHh
Q 017455 316 --PVRNCFLIAGSQSGVAGAQRIGMPCVVMRSRCITTLPVS-KTQRLADMLCRI 366 (371)
Q Consensus 316 --~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l~-~~~~~~~~l~~~ 366 (371)
+|++|++|||+.+|+++|+++|+.+|++.++........ .++.+++++.++
T Consensus 191 ~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~~~el 244 (275)
T 2qlt_A 191 DPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKNHESI 244 (275)
T ss_dssp CGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESSGGGE
T ss_pred CCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHc
Confidence 999999999999999999999999999988765332222 355565555443
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.8e-22 Score=178.91 Aligned_cols=180 Identities=14% Similarity=0.149 Sum_probs=120.9
Q ss_pred CceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHH------hhcC--ChHHHHHHHHHHcCCCCCC
Q 017455 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLR------KSAG--DEDRMLVLFFNRIGWPTSV 154 (371)
Q Consensus 83 ~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~------~~~g--~~~~~~~~~~~~~g~~~~~ 154 (371)
.+|+|+||+||||+|+... +. ..++.++|... ..+....+.+ ...| ....+...+...++....
T Consensus 4 m~k~iiFDlDGTL~d~~~~-~~---~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~- 75 (211)
T 2i6x_A 4 MIRNIVFDLGGVLIHLNRE-ES---IRRFKAIGVAD---IEEMLDPYLQKGLFLDLESGRKSEEEFRTELSRYIGKELT- 75 (211)
T ss_dssp CCSEEEECSBTTTEEECHH-HH---HHHHHHTTCTT---HHHHTCC---CCHHHHHHHSSSCHHHHHHHHHHHHTSCCC-
T ss_pred cceEEEEeCCCeeEecchH-HH---HHHHHHhCCch---HHHHHHHHhCchHHHHHHcCCCCHHHHHHHHHHHhCCCCC-
Confidence 4789999999999998864 22 56677777652 1111111110 0001 122233333333332211
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHH------cCccc
Q 017455 155 PTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK------LGSER 228 (371)
Q Consensus 155 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~------lgl~~ 228 (371)
.. .+.+........++||+.++|+.|++ |++++|+||+ ....+..+++. +|+..
T Consensus 76 --------~~--------~~~~~~~~~~~~~~~~~~~~l~~l~~-g~~~~i~t~~---~~~~~~~~~~~l~~~~~~~l~~ 135 (211)
T 2i6x_A 76 --------YQ--------QVYDALLGFLEEISAEKFDYIDSLRP-DYRLFLLSNT---NPYVLDLAMSPRFLPSGRTLDS 135 (211)
T ss_dssp --------HH--------HHHHHHGGGEEEECHHHHHHHHHHTT-TSEEEEEECC---CHHHHHHHTSTTSSTTCCCGGG
T ss_pred --------HH--------HHHHHHHHhhcccChHHHHHHHHHHc-CCeEEEEeCC---CHHHHHHHHhhhccccccCHHH
Confidence 00 11111112224589999999999999 9999999994 46777777887 79988
Q ss_pred cchheeecchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHH
Q 017455 229 ISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRA 308 (371)
Q Consensus 229 ~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~ 308 (371)
+|+.++. ++++ +..||+|++ |+.
T Consensus 136 ~f~~~~~-~~~~------------------------------------------~~~Kp~~~~--------------~~~ 158 (211)
T 2i6x_A 136 FFDKVYA-SCQM------------------------------------------GKYKPNEDI--------------FLE 158 (211)
T ss_dssp GSSEEEE-HHHH------------------------------------------TCCTTSHHH--------------HHH
T ss_pred HcCeEEe-eccc------------------------------------------CCCCCCHHH--------------HHH
Confidence 8887543 2222 234788888 999
Q ss_pred HHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEECCCC
Q 017455 309 GAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSRC 347 (371)
Q Consensus 309 a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~~ 347 (371)
+++++|++|++|++|||+.+|+.+|+++||.+++++++.
T Consensus 159 ~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~~ 197 (211)
T 2i6x_A 159 MIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDNGE 197 (211)
T ss_dssp HHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTC
T ss_pred HHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECCHH
Confidence 999999999999999999999999999999999998654
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.6e-22 Score=182.37 Aligned_cols=199 Identities=14% Similarity=0.127 Sum_probs=129.1
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHH---HHHHHHhhcCCh--HHHHHHHHHHcCCCCCCCc
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPI---YTDLLRKSAGDE--DRMLVLFFNRIGWPTSVPT 156 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~---~~~~~~~~~g~~--~~~~~~~~~~~g~~~~~~~ 156 (371)
..+|+|+||+||||+|+... +..+|++++.++|++. +... +..+.... |.. ......+.......
T Consensus 9 ~~~k~viFDlDGTL~ds~~~-~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~----- 78 (231)
T 2p11_A 9 PHDIVFLFDCDNTLLDNDHV-LADLRAHMMREFGAQN---SARYWEIFETLRTEL-GYADYLGALQRYRLEQPRD----- 78 (231)
T ss_dssp CCSEEEEECCBTTTBCHHHH-HHHHHHHHHHHHCHHH---HHHHHHHHHHHHHHC--CCCHHHHHHHHHHHCTTC-----
T ss_pred CCCeEEEEcCCCCCEecHHH-HHHHHHHHHHHcCCCc---chHHHHHHHHHHHhc-CchHHHHHHHHHHhccccc-----
Confidence 35789999999999999986 8899999999998752 2111 12222111 211 11111221111110
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeec
Q 017455 157 NEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVG 236 (371)
Q Consensus 157 ~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~ 236 (371)
...+.+.+.+.+.. ...+++||+.++|+.|+++| +++|+||+ ....+...++.+|+.++|+..+..
T Consensus 79 --------~~~~~~~~~~~~~~--~~~~~~~g~~~~l~~l~~~g-~~~i~Tn~---~~~~~~~~l~~~gl~~~f~~~~~~ 144 (231)
T 2p11_A 79 --------TRLLLMSSFLIDYP--FASRVYPGALNALRHLGARG-PTVILSDG---DVVFQPRKIARSGLWDEVEGRVLI 144 (231)
T ss_dssp --------TGGGGGHHHHHHCC--GGGGBCTTHHHHHHHHHTTS-CEEEEEEC---CSSHHHHHHHHTTHHHHTTTCEEE
T ss_pred --------hHHHHHHHHHHHHH--HhCCcCccHHHHHHHHHhCC-CEEEEeCC---CHHHHHHHHHHcCcHHhcCeeEEe
Confidence 01111222232221 23569999999999999999 99999995 477889999999999888753210
Q ss_pred chhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCC
Q 017455 237 NEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP 316 (371)
Q Consensus 237 ~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~ 316 (371)
. ++.|.+ ++.+++ |++
T Consensus 145 ~------------------------------------------------~~K~~~--------------~~~~~~--~~~ 160 (231)
T 2p11_A 145 Y------------------------------------------------IHKELM--------------LDQVME--CYP 160 (231)
T ss_dssp E------------------------------------------------SSGGGC--------------HHHHHH--HSC
T ss_pred c------------------------------------------------CChHHH--------------HHHHHh--cCC
Confidence 0 111344 666666 899
Q ss_pred CCcEEEEeCCHh---hHHHHHHcCCcEEEECCCCC--CCcccc---cccccchHHHHhhh
Q 017455 317 VRNCFLIAGSQS---GVAGAQRIGMPCVVMRSRCI--TTLPVS---KTQRLADMLCRILK 368 (371)
Q Consensus 317 p~e~I~IgDs~~---Di~aA~~aGm~~v~v~~~~~--~~~~l~---~~~~~~~~l~~~l~ 368 (371)
|++|+||||+.+ |+.+|+++||++|++.++.. ....+. .++.+++++.++++
T Consensus 161 ~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~~~~el~~ 220 (231)
T 2p11_A 161 ARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVERIGDLVE 220 (231)
T ss_dssp CSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEESSGGGGGG
T ss_pred CceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeecCHHHHHH
Confidence 999999999999 99999999999999988743 222222 25556655555443
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=5.8e-22 Score=175.90 Aligned_cols=106 Identities=13% Similarity=0.220 Sum_probs=84.8
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHH-cCccccchheeecchhHHhhhhccccccccccCCchhH
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~-lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~ 261 (371)
..++||+.++|+.|+++|++++|+||+. ......++.. +|+..+|+.++. +++.
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~---~~~~~~~~~~~~~l~~~f~~~~~-~~~~--------------------- 144 (206)
T 2b0c_A 90 VALRPEVIAIMHKLREQGHRVVVLSNTN---RLHTTFWPEEYPEIRDAADHIYL-SQDL--------------------- 144 (206)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCC---CCTTSCCGGGCHHHHHHCSEEEE-HHHH---------------------
T ss_pred cccCccHHHHHHHHHHCCCeEEEEECCC---hHHHHHHHHhccChhhheeeEEE-eccc---------------------
Confidence 5689999999999999999999999954 3444444444 677777766432 2221
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 017455 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (371)
Q Consensus 262 ~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v 341 (371)
+..||+|++ |+.+++++|++|++|++|||+.+|+.+|+++||.++
T Consensus 145 ---------------------~~~Kp~~~~--------------~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~ 189 (206)
T 2b0c_A 145 ---------------------GMRKPEARI--------------YQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSI 189 (206)
T ss_dssp ---------------------TCCTTCHHH--------------HHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred ---------------------CCCCCCHHH--------------HHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEE
Confidence 134788888 999999999999999999999999999999999999
Q ss_pred EECCCCC
Q 017455 342 VMRSRCI 348 (371)
Q Consensus 342 ~v~~~~~ 348 (371)
++.++..
T Consensus 190 ~~~~~~~ 196 (206)
T 2b0c_A 190 LVKDKTT 196 (206)
T ss_dssp ECCSTTH
T ss_pred EecCCch
Confidence 9986643
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=99.85 E-value=8.2e-22 Score=178.37 Aligned_cols=208 Identities=11% Similarity=0.134 Sum_probs=122.9
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHH
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (371)
+++|+|+||+||||+|++.. ..+++.+|... ...+.+..+.+... .........+..+.
T Consensus 12 ~~~k~viFD~DGTLvd~~~~------~~~~~~~g~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~------------ 70 (225)
T 1nnl_A 12 YSADAVCFDVDSTVIREEGI------DELAKICGVED--AVSEMTRRAMGGAV-PFKAALTERLALIQ------------ 70 (225)
T ss_dssp HHCSEEEEETBTTTBSSCHH------HHHHHHTTCTT--TC-------------CHHHHHHHHHHHHC------------
T ss_pred hhCCEEEEeCcccccccccH------HHHHHHhCCcH--HHHHHHHHHHcCCc-cHHHHHHHHHHHhc------------
Confidence 45789999999999998753 56778888752 22233333322100 11111111111111
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcc--ccchheeecchh
Q 017455 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE--RISKIKIVGNEE 239 (371)
Q Consensus 162 ~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~--~~f~~~i~~~~~ 239 (371)
...+.+.+++.....+++||+.++|+.|+++|++++|+|| +....+..+++.+|+. ++|+.++...
T Consensus 71 -------~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~---~~~~~~~~~l~~~gl~~~~~f~~~~~~~-- 138 (225)
T 1nnl_A 71 -------PSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISG---GFRSIVEHVASKLNIPATNVFANRLKFY-- 138 (225)
T ss_dssp -------CCHHHHHHHHHHSCCCBCTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHTTCCGGGEEEECEEEC--
T ss_pred -------CCHHHHHHHHHhccCCCCccHHHHHHHHHHCCCcEEEEeC---ChHHHHHHHHHHcCCCcccEEeeeEEEc--
Confidence 0011122333233567999999999999999999999999 4578889999999997 4776543111
Q ss_pred HHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCc
Q 017455 240 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRN 319 (371)
Q Consensus 240 ~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e 319 (371)
++..+.+.+..... +..+++|.+ |+.+++++|+ ++
T Consensus 139 -----~~~~~~~~~~~~~~-----------------------------------~~~~~Kp~~---~~~~~~~~~~--~~ 173 (225)
T 1nnl_A 139 -----FNGEYAGFDETQPT-----------------------------------AESGGKGKV---IKLLKEKFHF--KK 173 (225)
T ss_dssp -----TTSCEEEECTTSGG-----------------------------------GSTTHHHHH---HHHHHHHHCC--SC
T ss_pred -----CCCcEecCCCCCcc-----------------------------------cCCCchHHH---HHHHHHHcCC--Cc
Confidence 11112222211000 001122222 8999999998 89
Q ss_pred EEEEeCCHhhHHHHHHcCCcEEEECCCCCCCcccccccccchHHHHhhh
Q 017455 320 CFLIAGSQSGVAGAQRIGMPCVVMRSRCITTLPVSKTQRLADMLCRILK 368 (371)
Q Consensus 320 ~I~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l~~~~~~~~~l~~~l~ 368 (371)
|++|||+.+|+.+|+++|| +|+++...........++.+++++.++++
T Consensus 174 ~~~vGDs~~Di~~a~~ag~-~i~~~~~~~~~~~~~~~~~~~~~~~el~~ 221 (225)
T 1nnl_A 174 IIMIGDGATDMEACPPADA-FIGFGGNVIRQQVKDNAKWYITDFVELLG 221 (225)
T ss_dssp EEEEESSHHHHTTTTTSSE-EEEECSSCCCHHHHHHCSEEESCGGGGCC
T ss_pred EEEEeCcHHhHHHHHhCCe-EEEecCccccHHHHhcCCeeecCHHHHHH
Confidence 9999999999999999999 88886433221112345566666666554
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=99.85 E-value=8.7e-21 Score=175.09 Aligned_cols=102 Identities=12% Similarity=0.132 Sum_probs=88.1
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhH
Q 017455 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (371)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~ 261 (371)
..+++||+.++|+.|+ |++++|+||+ ....+...++.+|+..+|+.++. .+++.
T Consensus 91 ~~~~~~~~~~~l~~l~--g~~~~i~t~~---~~~~~~~~l~~~gl~~~f~~~~~-~~~~~-------------------- 144 (253)
T 1qq5_A 91 RLTPYPDAAQCLAELA--PLKRAILSNG---APDMLQALVANAGLTDSFDAVIS-VDAKR-------------------- 144 (253)
T ss_dssp SCCBCTTHHHHHHHHT--TSEEEEEESS---CHHHHHHHHHHTTCGGGCSEEEE-GGGGT--------------------
T ss_pred cCCCCccHHHHHHHHc--CCCEEEEeCc---CHHHHHHHHHHCCchhhccEEEE-ccccC--------------------
Confidence 3678999999999999 9999999994 47888899999999999887543 32221
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 017455 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (371)
Q Consensus 262 ~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v 341 (371)
..||+|++ |+.+++++|++|++|++|||+.+|+.+|+++||.++
T Consensus 145 ----------------------~~Kp~~~~--------------~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~ 188 (253)
T 1qq5_A 145 ----------------------VFKPHPDS--------------YALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVA 188 (253)
T ss_dssp ----------------------CCTTSHHH--------------HHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEE
T ss_pred ----------------------CCCCCHHH--------------HHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEE
Confidence 23788887 999999999999999999999999999999999999
Q ss_pred EECC
Q 017455 342 VMRS 345 (371)
Q Consensus 342 ~v~~ 345 (371)
++++
T Consensus 189 ~~~~ 192 (253)
T 1qq5_A 189 RVAR 192 (253)
T ss_dssp EECC
T ss_pred EECC
Confidence 9987
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.84 E-value=3.6e-21 Score=168.98 Aligned_cols=132 Identities=11% Similarity=0.069 Sum_probs=100.3
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCC----Cc--------HHHHHHHHHcC--ccccchheeecchhHHhhhhccc
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS----GD--------RIARSVVEKLG--SERISKIKIVGNEEVERSLYGQF 248 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~----~~--------~~~~~~l~~lg--l~~~f~~~i~~~~~~~~~~f~~~ 248 (371)
.+++||+.++|+.|+++|++++|+||.... .. ..+...++.+| ++.+|...+.+.
T Consensus 26 ~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~----------- 94 (179)
T 3l8h_A 26 WIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIFMCPHGPD----------- 94 (179)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEEEECCCTT-----------
T ss_pred ceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEcCCCCC-----------
Confidence 458999999999999999999999995410 00 45677788888 555443211111
Q ss_pred cccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHh
Q 017455 249 VLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQS 328 (371)
Q Consensus 249 v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~ 328 (371)
+.+. ..||+|++ |+.+++++|++|++|+||||+.+
T Consensus 95 ---~~~~----------------------------~~KP~~~~--------------~~~~~~~~~~~~~~~~~vGD~~~ 129 (179)
T 3l8h_A 95 ---DGCA----------------------------CRKPLPGM--------------YRDIARRYDVDLAGVPAVGDSLR 129 (179)
T ss_dssp ---SCCS----------------------------SSTTSSHH--------------HHHHHHHHTCCCTTCEEEESSHH
T ss_pred ---CCCC----------------------------CCCCCHHH--------------HHHHHHHcCCCHHHEEEECCCHH
Confidence 1221 23888888 99999999999999999999999
Q ss_pred hHHHHHHcCCcEEEECCCCCCCccc----ccccccchHHHHhhhhc
Q 017455 329 GVAGAQRIGMPCVVMRSRCITTLPV----SKTQRLADMLCRILKSI 370 (371)
Q Consensus 329 Di~aA~~aGm~~v~v~~~~~~~~~l----~~~~~~~~~l~~~l~~i 370 (371)
|+.+|+++||++|++.++......+ ..++.+++++.|+++.|
T Consensus 130 Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el~~~l 175 (179)
T 3l8h_A 130 DLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAVAEQL 175 (179)
T ss_dssp HHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHHHHHH
T ss_pred HHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHHHHHH
Confidence 9999999999999999887655443 45678888887776543
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.84 E-value=1e-20 Score=168.66 Aligned_cols=113 Identities=16% Similarity=0.270 Sum_probs=94.2
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHH
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~ 262 (371)
.+++||+.++|+.|+++|++++|+||+..+....+...++.+|+..+|+.++.+.+.+.. +
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~--------------~----- 93 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQP--------------G----- 93 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSST--------------T-----
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEccccccc--------------c-----
Confidence 569999999999999999999999996533338899999999999999876544322100 0
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCC-HhhHHHHHHcCCcEE
Q 017455 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCV 341 (371)
Q Consensus 263 ~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs-~~Di~aA~~aGm~~v 341 (371)
+..||+|++ |+.+++++|++|++|+||||+ .+|+.+|+++||++|
T Consensus 94 --------------------~~~KP~p~~--------------~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i 139 (189)
T 3ib6_A 94 --------------------KMEKPDKTI--------------FDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAI 139 (189)
T ss_dssp --------------------CCCTTSHHH--------------HHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEE
T ss_pred --------------------CCCCcCHHH--------------HHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEE
Confidence 023788888 999999999999999999999 799999999999999
Q ss_pred EECCCCC
Q 017455 342 VMRSRCI 348 (371)
Q Consensus 342 ~v~~~~~ 348 (371)
++.++..
T Consensus 140 ~v~~~~~ 146 (189)
T 3ib6_A 140 WLQNPEV 146 (189)
T ss_dssp EECCTTT
T ss_pred EECCccc
Confidence 9988765
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2.9e-20 Score=186.63 Aligned_cols=189 Identities=14% Similarity=0.144 Sum_probs=118.9
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHH
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (371)
|++|+||||+||||++... ...+...+...++.. +.....+... ........+. .+. ... ..
T Consensus 1 M~~k~viFD~DGTL~~~~~---~~~~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~~~~~--~~~---~~~---~~ 62 (555)
T 3i28_A 1 MTLRAAVFDLDGVLALPAV---FGVLGRTEEALALPR-----GLLNDAFQKG--GPEGATTRLM--KGE---ITL---SQ 62 (555)
T ss_dssp ---CEEEECTBTTTEESCT---HHHHHHHHHHTTCCT-----THHHHHHHTT--GGGSHHHHHH--TTS---SCH---HH
T ss_pred CceEEEEEecCCeeecchh---HHHHHHHHHHhCCcH-----HHHHHHHhcc--CcccchhHHh--cCC---CCH---HH
Confidence 4589999999999987664 477777888888752 1222222111 1111111111 010 000 11
Q ss_pred HHHHHHHH-----------------HHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHc
Q 017455 162 FVKNVLQE-----------------KKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL 224 (371)
Q Consensus 162 ~~~~l~~~-----------------~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~l 224 (371)
+.+.+... ..+.+.+... ..+++||+.++|+.|+++|++++|+||+.. ........+..+
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~-~~~~~~~~~~~~ 139 (555)
T 3i28_A 63 WIPLMEENCRKCSETAKVCLPKNFSIKEIFDKAIS--ARKINRPMLQAALMLRKKGFTTAILTNTWL-DDRAERDGLAQL 139 (555)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCTTCCHHHHHHHHHH--HCEECHHHHHHHHHHHHTTCEEEEEECCCC-CCSTTHHHHHHH
T ss_pred HHHHHHHHHHHhhhccCCCCCccccHHHHHHHhHh--hcCcChhHHHHHHHHHHCCCEEEEEeCCCc-cccchhhHHHHH
Confidence 11111110 2223333332 256999999999999999999999999610 112223333333
Q ss_pred --CccccchheeecchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHH
Q 017455 225 --GSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKI 302 (371)
Q Consensus 225 --gl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~ 302 (371)
|+.++|+.++ +++++. ..||+|++
T Consensus 140 ~~~l~~~fd~i~-~~~~~~------------------------------------------~~KP~p~~----------- 165 (555)
T 3i28_A 140 MCELKMHFDFLI-ESCQVG------------------------------------------MVKPEPQI----------- 165 (555)
T ss_dssp HHHHHTTSSEEE-EHHHHT------------------------------------------CCTTCHHH-----------
T ss_pred hhhhhhheeEEE-eccccC------------------------------------------CCCCCHHH-----------
Confidence 7788888743 333332 34888888
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEECCCCC
Q 017455 303 VAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSRCI 348 (371)
Q Consensus 303 ~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~~~ 348 (371)
|+.+++++|++|++|+||||+.+||.+|+++||++|++.++..
T Consensus 166 ---~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~~~~~~ 208 (555)
T 3i28_A 166 ---YKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDTDT 208 (555)
T ss_dssp ---HHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEECSSHHH
T ss_pred ---HHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEECCCcc
Confidence 9999999999999999999999999999999999999987654
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.6e-19 Score=163.69 Aligned_cols=194 Identities=11% Similarity=0.100 Sum_probs=121.1
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHH----HHHHHh-hcC--ChHHHHHHHHHHc-CCCCC
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIY----TDLLRK-SAG--DEDRMLVLFFNRI-GWPTS 153 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~----~~~~~~-~~g--~~~~~~~~~~~~~-g~~~~ 153 (371)
+.+++||||+||||+|++.. ..|...+...++.. ....+ ..+... ..| ....+...+...+ +..
T Consensus 2 ~~~k~viFDlDGTL~d~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-- 73 (232)
T 3fvv_A 2 TTRRLALFDLDHTLLPLDSD---YQWADFLARTGRAG---DPAEARRRNDDLMERYNRGELTAEQAAEFMLGLLAAHS-- 73 (232)
T ss_dssp CCCEEEEECCBTTTBSSCHH---HHHHHHHHHTTSSS---SHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHTSC--
T ss_pred CCCcEEEEeCCCCCcCCchH---HHHHHHHHHcCCCC---ccHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHhcCCC--
Confidence 35789999999999999864 46777777666530 11111 111110 111 1122222222111 211
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchhe
Q 017455 154 VPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIK 233 (371)
Q Consensus 154 ~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~ 233 (371)
.+.+.+...+.+.+.+. ..++||+.++|+.|+++|++++|+|| +....++.+++.+|+++++...
T Consensus 74 ---------~~~~~~~~~~~~~~~~~---~~~~~g~~~~l~~l~~~g~~~~ivS~---~~~~~~~~~~~~~g~~~~~~~~ 138 (232)
T 3fvv_A 74 ---------PVELAAWHEEFMRDVIR---PSLTVQAVDVVRGHLAAGDLCALVTA---TNSFVTAPIARAFGVQHLIATD 138 (232)
T ss_dssp ---------HHHHHHHHHHHHHHTTG---GGCCHHHHHHHHHHHHTTCEEEEEES---SCHHHHHHHHHHTTCCEEEECE
T ss_pred ---------HHHHHHHHHHHHHHhhh---hhcCHHHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHHHcCCCEEEEcc
Confidence 11223333333333331 14799999999999999999999999 5588999999999998877654
Q ss_pred eecchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHc
Q 017455 234 IVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA 313 (371)
Q Consensus 234 i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~l 313 (371)
+...+.. .+| ||.+.. +..++++.. ++.+++++
T Consensus 139 ~~~~~~~--------~~g----------------------------------~~~~~~--~~~~~K~~~---~~~~~~~~ 171 (232)
T 3fvv_A 139 PEYRDGR--------YTG----------------------------------RIEGTP--SFREGKVVR---VNQWLAGM 171 (232)
T ss_dssp EEEETTE--------EEE----------------------------------EEESSC--SSTHHHHHH---HHHHHHHT
T ss_pred eEEECCE--------Eee----------------------------------eecCCC--CcchHHHHH---HHHHHHHc
Confidence 4322111 111 222211 112222333 88999999
Q ss_pred C---CCCCcEEEEeCCHhhHHHHHHcCCcEEEECC
Q 017455 314 E---KPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (371)
Q Consensus 314 g---v~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~ 345 (371)
| ++|++|++|||+.+|+.+++.+|+.+++..+
T Consensus 172 ~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~~ 206 (232)
T 3fvv_A 172 GLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPS 206 (232)
T ss_dssp TCCGGGSSEEEEEECCGGGHHHHHHSSEEEEESCC
T ss_pred CCCcCchhheEEEeCCHhhHHHHHhCCCeEEECcC
Confidence 9 9999999999999999999999999887543
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=99.82 E-value=7.8e-20 Score=181.43 Aligned_cols=138 Identities=14% Similarity=0.045 Sum_probs=103.5
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchh-eeecchhHHhhhhccccccccccCCchhH
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI-KIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~-~i~~~~~~~~~~f~~~v~g~~v~~~~~~~ 261 (371)
.+++||+.++|+.|+++|++++|+||+ ....+...++++|+.++|+. .+++++++... |+....-
T Consensus 214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~---~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~-------~~~~~~~---- 279 (384)
T 1qyi_A 214 LRPVDEVKVLLNDLKGAGFELGIATGR---PYTETVVPFENLGLLPYFEADFIATASDVLEA-------ENMYPQA---- 279 (384)
T ss_dssp SSCHHHHHHHHHHHHHTTCEEEEECSS---CHHHHHHHHHHHTCGGGSCGGGEECHHHHHHH-------HHHSTTS----
T ss_pred CCcCcCHHHHHHHHHhCCCEEEEEeCC---cHHHHHHHHHHcCChHhcCCCEEEeccccccc-------ccccccc----
Confidence 578999999999999999999999994 47889999999999999982 35665554310 0000000
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcC--------------CCCCcEEEEeCCH
Q 017455 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE--------------KPVRNCFLIAGSQ 327 (371)
Q Consensus 262 ~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lg--------------v~p~e~I~IgDs~ 327 (371)
....||+|++ |..+++++| ++|++||||||+.
T Consensus 280 --------------------kp~~KP~P~~--------------~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~ 325 (384)
T 1qyi_A 280 --------------------RPLGKPNPFS--------------YIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSL 325 (384)
T ss_dssp --------------------CCCCTTSTHH--------------HHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSH
T ss_pred --------------------cCCCCCCHHH--------------HHHHHHHcCCccccccccccccCCCCcCeEEEcCCH
Confidence 0013777777 999999999 9999999999999
Q ss_pred hhHHHHHHcCCcEEEECCCCCC---Cccc--ccccccchHHHHhhh
Q 017455 328 SGVAGAQRIGMPCVVMRSRCIT---TLPV--SKTQRLADMLCRILK 368 (371)
Q Consensus 328 ~Di~aA~~aGm~~v~v~~~~~~---~~~l--~~~~~~~~~l~~~l~ 368 (371)
+|+.+|+++||++|++.++... ...+ ..++.+++++.+++.
T Consensus 326 ~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi~sl~eL~~ 371 (384)
T 1qyi_A 326 ADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRG 371 (384)
T ss_dssp HHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHH
T ss_pred HHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEECCHHHHHH
Confidence 9999999999999999987642 1223 245666666655543
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.82 E-value=4.2e-21 Score=171.73 Aligned_cols=110 Identities=9% Similarity=0.110 Sum_probs=87.8
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHH
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~ 262 (371)
.+++||+.++|+.|+++|++++|+|| +....+...++.+|+..+|+.++...+.. +...+.+. +..
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~---~~~~~~~~~l~~~gl~~~f~~~~~~~~~~----~~~~~~~~-~~~------ 139 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSG---GFDLATNHYRDLLHLDAAFSNTLIVENDA----LNGLVTGH-MMF------ 139 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEE---EEHHHHHHHHHHHTCSEEEEEEEEEETTE----EEEEEEES-CCS------
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcC---CchhHHHHHHHHcCcchhccceeEEeCCE----EEeeeccC-CCC------
Confidence 67999999999999999999999999 55788999999999999998765433211 11111111 111
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 263 ~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
.||.|.+ |+.+++++|++|++|++|||+.+|+.+|+++|+.+++
T Consensus 140 ----------------------~k~k~~~--------------~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~ 183 (217)
T 3m1y_A 140 ----------------------SHSKGEM--------------LLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF 183 (217)
T ss_dssp ----------------------TTHHHHH--------------HHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE
T ss_pred ----------------------CCChHHH--------------HHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE
Confidence 1555555 9999999999999999999999999999999999887
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.5e-20 Score=169.61 Aligned_cols=101 Identities=13% Similarity=0.159 Sum_probs=79.8
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHH
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~ 262 (371)
.+++||+.++|+.|+++|++++|+||+. ...+ +..++ .+|+.+ +.++++..
T Consensus 35 ~~~~pg~~e~L~~L~~~g~~~~i~T~~~---~~~~---~~~~~--~~~d~v---------------~~~~~~~~------ 85 (196)
T 2oda_A 35 AQLTPGAQNALKALRDQGMPCAWIDELP---EALS---TPLAA--PVNDWM---------------IAAPRPTA------ 85 (196)
T ss_dssp GSBCTTHHHHHHHHHHHTCCEEEECCSC---HHHH---HHHHT--TTTTTC---------------EECCCCSS------
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEcCCh---HHHH---HHhcC--ccCCEE---------------EECCcCCC------
Confidence 4589999999999999999999999943 4433 23333 344443 33333332
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCC-CcEEEEeCCHhhHHHHHHcCCcEE
Q 017455 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV-RNCFLIAGSQSGVAGAQRIGMPCV 341 (371)
Q Consensus 263 ~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p-~e~I~IgDs~~Di~aA~~aGm~~v 341 (371)
.||+|++ |..+++++|+.| ++||||||+.+||.+|+++||.+|
T Consensus 86 ----------------------~KP~p~~--------------~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i 129 (196)
T 2oda_A 86 ----------------------GWPQPDA--------------CWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTI 129 (196)
T ss_dssp ----------------------CTTSTHH--------------HHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEE
T ss_pred ----------------------CCCChHH--------------HHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEE
Confidence 2888888 999999999976 899999999999999999999999
Q ss_pred EECCCCC
Q 017455 342 VMRSRCI 348 (371)
Q Consensus 342 ~v~~~~~ 348 (371)
+|.+++.
T Consensus 130 ~v~~g~~ 136 (196)
T 2oda_A 130 GLASCGP 136 (196)
T ss_dssp EESSSST
T ss_pred EEccCCc
Confidence 9998764
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.9e-20 Score=180.06 Aligned_cols=183 Identities=12% Similarity=0.131 Sum_probs=120.2
Q ss_pred CCCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhH
Q 017455 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK 160 (371)
Q Consensus 81 ~~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~ 160 (371)
.+++|+|+||+||||++++.. ..+...+|... .+ .+.....+. | ...+.+.+..+++.....+
T Consensus 105 ~~~~kaviFDlDGTLid~~~~------~~la~~~g~~~-~~-~~~~~~~~~---g-~~~~~~~l~~~~~~l~~~~----- 167 (317)
T 4eze_A 105 LPANGIIAFDMDSTFIAEEGV------DEIARELGMST-QI-TAITQQAME---G-KLDFNASFTRRIGMLKGTP----- 167 (317)
T ss_dssp CCCSCEEEECTBTTTBSSCHH------HHHHHHTTCHH-HH-HHHHHHHHT---T-SSCHHHHHHHHHHTTTTCB-----
T ss_pred CCCCCEEEEcCCCCccCCccH------HHHHHHhCCcH-HH-HHHHHHHhc---C-CCCHHHHHHHHHHHhcCCC-----
Confidence 456899999999999998764 44555667641 01 112222221 1 1112222222222211111
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhH
Q 017455 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 240 (371)
Q Consensus 161 ~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~ 240 (371)
.+.+.+.. ...+++||+.++|+.|+++|++++|+|| +....++.+++.+|+..+|+.++...+.
T Consensus 168 ----------~~~i~~~~--~~~~l~pg~~e~L~~Lk~~G~~v~IvSn---~~~~~~~~~l~~lgl~~~f~~~l~~~dg- 231 (317)
T 4eze_A 168 ----------KAVLNAVC--DRMTLSPGLLTILPVIKAKGFKTAIISG---GLDIFTQRLKARYQLDYAFSNTVEIRDN- 231 (317)
T ss_dssp ----------HHHHHHHH--HTCCBCTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHHTCSEEEEECEEEETT-
T ss_pred ----------HHHHHHHH--hCCEECcCHHHHHHHHHhCCCEEEEEeC---ccHHHHHHHHHHcCCCeEEEEEEEeeCC-
Confidence 01111221 1367999999999999999999999999 5589999999999999999875443221
Q ss_pred HhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcE
Q 017455 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (371)
Q Consensus 241 ~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~ 320 (371)
.+...+.+.. . ..||+|++ |+.+++++|++|++|
T Consensus 232 ---~~tg~i~~~~-~----------------------------~~kpkp~~--------------~~~~~~~lgv~~~~~ 265 (317)
T 4eze_A 232 ---VLTDNITLPI-M----------------------------NAANKKQT--------------LVDLAARLNIATENI 265 (317)
T ss_dssp ---EEEEEECSSC-C----------------------------CHHHHHHH--------------HHHHHHHHTCCGGGE
T ss_pred ---eeeeeEeccc-C----------------------------CCCCCHHH--------------HHHHHHHcCCCcceE
Confidence 1111111111 1 12556666 999999999999999
Q ss_pred EEEeCCHhhHHHHHHcCCcEEE
Q 017455 321 FLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 321 I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
+||||+.+|+.+|+++|+.+++
T Consensus 266 i~VGDs~~Di~aa~~AG~~va~ 287 (317)
T 4eze_A 266 IACGDGANDLPMLEHAGTGIAW 287 (317)
T ss_dssp EEEECSGGGHHHHHHSSEEEEE
T ss_pred EEEeCCHHHHHHHHHCCCeEEe
Confidence 9999999999999999998887
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.79 E-value=6.2e-21 Score=172.82 Aligned_cols=206 Identities=14% Similarity=0.118 Sum_probs=121.8
Q ss_pred CCceEEEEecCCccccccccCcHHH--HHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchh
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQA--FNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEK 159 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a--~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~ 159 (371)
|.+|+|+||+||||+++... +..+ +.+.+++.|+.. . ......|+........+...|+.......
T Consensus 1 M~~k~i~fDlDGTLl~~~~~-~~~~~~~~~~l~~~g~~~--~-------~~t~~~g~~~~~~~~~~~~~g~~~~~~~~-- 68 (250)
T 2c4n_A 1 MTIKNVICDIDGVLMHDNVA-VPGAAEFLHGIMDKGLPL--V-------LLTNYPSQTGQDLANRFATAGVDVPDSVF-- 68 (250)
T ss_dssp CCCCEEEEECBTTTEETTEE-CTTHHHHHHHHHHTTCCE--E-------EEESCCSCCHHHHHHHHHHTTCCCCGGGE--
T ss_pred CCccEEEEcCcceEEeCCEe-CcCHHHHHHHHHHcCCcE--E-------EEECCCCCCHHHHHHHHHHcCCCCCHHHe--
Confidence 45799999999999998765 5555 566677888863 1 00011133322222334445654221100
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEE---------------------------------EE
Q 017455 160 KAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLI---------------------------------VL 206 (371)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~---------------------------------Iv 206 (371)
+.. ......+.+.+ .....+.||+.++++.++++|++++ ++
T Consensus 69 ---~~~--~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 142 (250)
T 2c4n_A 69 ---YTS--AMATADFLRRQ-EGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIA 142 (250)
T ss_dssp ---EEH--HHHHHHHHHTS-SCCEEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEE
T ss_pred ---EcH--HHHHHHHHHhc-CCCEEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEE
Confidence 000 00011122222 2345689999999999999999998 55
Q ss_pred cCCCCCCcHHHHHHHHHcC-ccccchheeecchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhc
Q 017455 207 TAYGKSGDRIARSVVEKLG-SERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASML 285 (371)
Q Consensus 207 Tn~~~~~~~~~~~~l~~lg-l~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~ 285 (371)
||.. ......+..+| +.. .|+.+...+.+. ..
T Consensus 143 t~~~----~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~----------------------------~~ 175 (250)
T 2c4n_A 143 TNPD----THGRGFYPACGALCA---------------GIEKISGRKPFY----------------------------VG 175 (250)
T ss_dssp SCCC----SBSSTTCBCHHHHHH---------------HHHHHHCCCCEE----------------------------CS
T ss_pred ECCC----CCCCCeeecchHHHH---------------HHHHHhCCCceE----------------------------eC
Confidence 5421 00000000011 011 122222222222 23
Q ss_pred cCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCC-HhhHHHHHHcCCcEEEECCCCCCCcccc----cccccc
Q 017455 286 KLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRSRCITTLPVS----KTQRLA 360 (371)
Q Consensus 286 KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs-~~Di~aA~~aGm~~v~v~~~~~~~~~l~----~~~~~~ 360 (371)
||.|.. |+.+++++|++|++|++|||+ .+|++||+.+|+.+++|.++....+.+. .++.++
T Consensus 176 kpk~~~--------------~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~ 241 (250)
T 2c4n_A 176 KPSPWI--------------IRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIY 241 (250)
T ss_dssp TTSTHH--------------HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEE
T ss_pred CCCHHH--------------HHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEE
Confidence 676666 999999999999999999999 6999999999999999998876545443 455566
Q ss_pred hHHHHh
Q 017455 361 DMLCRI 366 (371)
Q Consensus 361 ~~l~~~ 366 (371)
+++.++
T Consensus 242 ~~~~el 247 (250)
T 2c4n_A 242 PSVAEI 247 (250)
T ss_dssp SSGGGC
T ss_pred CCHHHh
Confidence 655443
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.8e-20 Score=172.58 Aligned_cols=125 Identities=14% Similarity=0.075 Sum_probs=89.3
Q ss_pred CCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHHHH
Q 017455 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLAT 264 (371)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~ 264 (371)
++||+.++++.|+ +|+++ ++||.. .......+..+|+..+|+.. ..++..+.+..
T Consensus 123 ~~~~~~~~l~~l~-~~~~~-i~t~~~---~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~-------- 177 (259)
T 2ho4_A 123 HYQLLNQAFRLLL-DGAPL-IAIHKA---RYYKRKDGLALGPGPFVTAL------------EYATDTKAMVV-------- 177 (259)
T ss_dssp BHHHHHHHHHHHH-TTCCE-EESCCC---SEEEETTEEEECSHHHHHHH------------HHHHTCCCEEC--------
T ss_pred CHHHHHHHHHHHH-CCCEE-EEECCC---CcCcccCCcccCCcHHHHHH------------HHHhCCCceEe--------
Confidence 7899999999999 89999 999954 22223334455666665421 11122222222
Q ss_pred HHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCcEEEE
Q 017455 265 EARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVM 343 (371)
Q Consensus 265 ~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~-~Di~aA~~aGm~~v~v 343 (371)
.||+|++ |+.+++++|++|++|++|||+. +|+.+|+++||++|++
T Consensus 178 --------------------~Kp~~~~--------------~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v 223 (259)
T 2ho4_A 178 --------------------GKPEKTF--------------FLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILV 223 (259)
T ss_dssp --------------------STTSHHH--------------HHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEE
T ss_pred --------------------cCCCHHH--------------HHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEE
Confidence 3788888 9999999999999999999998 9999999999999999
Q ss_pred CCCCCCCcc----cccccccchHHHHhhh
Q 017455 344 RSRCITTLP----VSKTQRLADMLCRILK 368 (371)
Q Consensus 344 ~~~~~~~~~----l~~~~~~~~~l~~~l~ 368 (371)
.++.....+ ...++.+++++.++++
T Consensus 224 ~~g~~~~~~~~~~~~~~~~~~~~l~~l~~ 252 (259)
T 2ho4_A 224 KTGKYKAADEEKINPPPYLTCESFPHAVD 252 (259)
T ss_dssp SSTTCCTTGGGGSSSCCSEEESCHHHHHH
T ss_pred CCCCCCcccccccCCCCCEEECCHHHHHH
Confidence 987432222 1345667777766654
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=99.78 E-value=4.2e-19 Score=158.34 Aligned_cols=166 Identities=16% Similarity=0.168 Sum_probs=112.4
Q ss_pred ceEEEEecCCccccccccCcHHHHHHHHHHcCCCCC---CCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhH
Q 017455 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCA---NWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK 160 (371)
Q Consensus 84 ~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~ 160 (371)
+|+|+||+||||++ .+|..+++++|++.. ..+...+..+.+. . ...+. +.+.+ .
T Consensus 2 ~k~viFD~DGTL~d-------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~---~~~~~-~~~~~----~---- 58 (206)
T 1rku_A 2 MEIACLDLEGVLVP-------EIWIAFAEKTGIDALKATTRDIPDYDVLMKQ----R---LRILD-EHGLK----L---- 58 (206)
T ss_dssp CEEEEEESBTTTBC-------CHHHHHHHHHTCGGGGCCTTTCCCHHHHHHH----H---HHHHH-HTTCC----H----
T ss_pred CcEEEEccCCcchh-------hHHHHHHHHcCChHHHHHhcCcCCHHHHHHH----H---HHHHH-HCCCC----H----
Confidence 68999999999999 356778888887620 0112222333221 0 01111 11221 0
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhH
Q 017455 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 240 (371)
Q Consensus 161 ~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~ 240 (371)
+. +.+.. ...+++||+.++|+.|+++ ++++|+|| +....+..+++.+|+..+|...+++++++
T Consensus 59 ---~~--------~~~~~--~~~~~~~g~~~~l~~l~~~-~~~~i~s~---~~~~~~~~~l~~~gl~~~f~~~~~~~~~~ 121 (206)
T 1rku_A 59 ---GD--------IQEVI--ATLKPLEGAVEFVDWLRER-FQVVILSD---TFYEFSQPLMRQLGFPTLLCHKLEIDDSD 121 (206)
T ss_dssp ---HH--------HHHHH--TTCCCCTTHHHHHHHHHTT-SEEEEEEE---EEHHHHHHHHHHTTCCCEEEEEEEECTTS
T ss_pred ---HH--------HHHHH--HhcCCCccHHHHHHHHHhc-CcEEEEEC---ChHHHHHHHHHHcCCcceecceeEEcCCc
Confidence 01 11122 2477999999999999999 99999999 45788999999999999884222322121
Q ss_pred HhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcE
Q 017455 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (371)
Q Consensus 241 ~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~ 320 (371)
.. .+ ..||+|++ +..+++++|++|++|
T Consensus 122 ~~-------------~~--------------------------~~~p~p~~--------------~~~~l~~l~~~~~~~ 148 (206)
T 1rku_A 122 RV-------------VG--------------------------YQLRQKDP--------------KRQSVIAFKSLYYRV 148 (206)
T ss_dssp CE-------------EE--------------------------EECCSSSH--------------HHHHHHHHHHTTCEE
T ss_pred eE-------------Ee--------------------------eecCCCch--------------HHHHHHHHHhcCCEE
Confidence 00 00 01377766 999999999999999
Q ss_pred EEEeCCHhhHHHHHHcCCcEEE
Q 017455 321 FLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 321 I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
+||||+.+|+.+|+++||.+++
T Consensus 149 ~~iGD~~~Di~~a~~aG~~~~~ 170 (206)
T 1rku_A 149 IAAGDSYNDTTMLSEAHAGILF 170 (206)
T ss_dssp EEEECSSTTHHHHHHSSEEEEE
T ss_pred EEEeCChhhHHHHHhcCccEEE
Confidence 9999999999999999998774
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-19 Score=161.01 Aligned_cols=133 Identities=11% Similarity=0.095 Sum_probs=93.2
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcc--ccchheeecchhHHhhhhccccccccccCCchh
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE--RISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~--~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~ 260 (371)
..++||+.++|+.|+++|++++|+|| +....+...++.+|+. ++|...++...+.. + . ++.
T Consensus 81 ~~~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~--~~~----- 143 (219)
T 3kd3_A 81 NLLTDGIKELVQDLKNKGFEIWIFSG---GLSESIQPFADYLNIPRENIFAVETIWNSDGS---F----K--ELD----- 143 (219)
T ss_dssp TTBCTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHHTCCGGGEEEEEEEECTTSB---E----E--EEE-----
T ss_pred ccCChhHHHHHHHHHHCCCeEEEEcC---CcHHHHHHHHHHcCCCcccEEEeeeeecCCCc---e----e--ccC-----
Confidence 45899999999999999999999999 4578899999999994 45543222111100 0 0 011
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcE
Q 017455 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (371)
Q Consensus 261 ~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~ 340 (371)
..||+|.. .++.+++.+|++|++|++|||+.+|+.++ ++||.+
T Consensus 144 -----------------------~~~~~~~~-------------~~~~l~~~~~~~~~~~~~vGD~~~Di~~~-~~G~~~ 186 (219)
T 3kd3_A 144 -----------------------NSNGACDS-------------KLSAFDKAKGLIDGEVIAIGDGYTDYQLY-EKGYAT 186 (219)
T ss_dssp -----------------------CTTSTTTC-------------HHHHHHHHGGGCCSEEEEEESSHHHHHHH-HHTSCS
T ss_pred -----------------------CCCCCccc-------------HHHHHHHHhCCCCCCEEEEECCHhHHHHH-hCCCCc
Confidence 12566655 25666677799999999999999999998 689998
Q ss_pred EEECCCCCCCcc--cccccccchHHHHhhhh
Q 017455 341 VVMRSRCITTLP--VSKTQRLADMLCRILKS 369 (371)
Q Consensus 341 v~v~~~~~~~~~--l~~~~~~~~~l~~~l~~ 369 (371)
+++..+.....+ ...++.+++++.++++.
T Consensus 187 ~~v~~~~~~~~~~~~~~ad~v~~~~~el~~~ 217 (219)
T 3kd3_A 187 KFIAYMEHIEREKVINLSKYVARNVAELASL 217 (219)
T ss_dssp EEEEECSSCCCHHHHHHCSEEESSHHHHHHH
T ss_pred EEEeccCccccHHHHhhcceeeCCHHHHHHh
Confidence 887654333222 23467777777776654
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.78 E-value=3.2e-19 Score=178.07 Aligned_cols=183 Identities=14% Similarity=0.143 Sum_probs=118.8
Q ss_pred CCCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhH
Q 017455 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK 160 (371)
Q Consensus 81 ~~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~ 160 (371)
...+|+|+|||||||++++.. ..+....|.. +....+......+...+.+.+..++..-...+.
T Consensus 182 ~~~~k~viFD~DgTLi~~~~~------~~la~~~g~~------~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~---- 245 (415)
T 3p96_A 182 RRAKRLIVFDVDSTLVQGEVI------EMLAAKAGAE------GQVAAITDAAMRGELDFAQSLQQRVATLAGLPA---- 245 (415)
T ss_dssp TTCCCEEEECTBTTTBSSCHH------HHHHHHTTCH------HHHHHHHHHHHTTCSCHHHHHHHHHHTTTTCBT----
T ss_pred ccCCcEEEEcCcccCcCCchH------HHHHHHcCCc------HHHHHHHHHHhcCCcCHHHHHHHHHHHhcCCCH----
Confidence 345789999999999998753 4455556654 112222211111122222222222222111211
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhH
Q 017455 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 240 (371)
Q Consensus 161 ~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~ 240 (371)
.... .+.+ ..+++||+.++|+.|+++|++++|+|| ++...+..+++.+|++.+|...+..
T Consensus 246 ----~~~~----~~~~-----~~~~~pg~~e~l~~Lk~~G~~~~ivS~---~~~~~~~~~~~~lgl~~~~~~~l~~---- 305 (415)
T 3p96_A 246 ----TVID----EVAG-----QLELMPGARTTLRTLRRLGYACGVVSG---GFRRIIEPLAEELMLDYVAANELEI---- 305 (415)
T ss_dssp ----HHHH----HHHH-----HCCBCTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHTTCSEEEEECEEE----
T ss_pred ----HHHH----HHHH-----hCccCccHHHHHHHHHHCCCEEEEEcC---CcHHHHHHHHHHcCccceeeeeEEE----
Confidence 1111 1111 246999999999999999999999999 5588999999999999888654321
Q ss_pred HhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcE
Q 017455 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (371)
Q Consensus 241 ~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~ 320 (371)
++..++|.....- ...||+|++ |+.+++++|++|++|
T Consensus 306 ----~dg~~tg~~~~~v-------------------------~~~kpk~~~--------------~~~~~~~~gi~~~~~ 342 (415)
T 3p96_A 306 ----VDGTLTGRVVGPI-------------------------IDRAGKATA--------------LREFAQRAGVPMAQT 342 (415)
T ss_dssp ----ETTEEEEEECSSC-------------------------CCHHHHHHH--------------HHHHHHHHTCCGGGE
T ss_pred ----eCCEEEeeEccCC-------------------------CCCcchHHH--------------HHHHHHHcCcChhhE
Confidence 1222333211000 012566666 999999999999999
Q ss_pred EEEeCCHhhHHHHHHcCCcEEE
Q 017455 321 FLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 321 I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
++|||+.+|+.+|+++|+.+++
T Consensus 343 i~vGD~~~Di~~a~~aG~~va~ 364 (415)
T 3p96_A 343 VAVGDGANDIDMLAAAGLGIAF 364 (415)
T ss_dssp EEEECSGGGHHHHHHSSEEEEE
T ss_pred EEEECCHHHHHHHHHCCCeEEE
Confidence 9999999999999999998887
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.3e-19 Score=168.49 Aligned_cols=127 Identities=10% Similarity=-0.012 Sum_probs=88.2
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHH-HHHHcCccccchheeecchhHHhhhhccccccccccCCchh
Q 017455 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARS-VVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (371)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~-~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~ 260 (371)
...++||+.++++.|+ +|+++ |+||..... ..... +....++..+|+. ++..+.+..
T Consensus 124 ~~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~-~~~~~~~~~~~~l~~~f~~---------------~~~~~~~~~---- 181 (264)
T 1yv9_A 124 TELSYEKVVLATLAIQ-KGALF-IGTNPDKNI-PTERGLLPGAGSVVTFVET---------------ATQTKPVYI---- 181 (264)
T ss_dssp TTCCHHHHHHHHHHHH-TTCEE-EESCCCSEE-EETTEEEECHHHHHHHHHH---------------HHTCCCEEC----
T ss_pred CCcCHHHHHHHHHHHh-CCCEE-EEECCCCcc-cCCCCcccCCcHHHHHHHH---------------HhCCCcccc----
Confidence 4568999999999997 89998 999954210 00000 1111123333333 333333222
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCC-HhhHHHHHHcCCc
Q 017455 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMP 339 (371)
Q Consensus 261 ~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs-~~Di~aA~~aGm~ 339 (371)
.||+|++ |+.+++++|++|++|+||||+ .+|+.+|+++||+
T Consensus 182 ------------------------~KP~p~~--------------~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~ 223 (264)
T 1yv9_A 182 ------------------------GKPKAII--------------MERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGID 223 (264)
T ss_dssp ------------------------STTSHHH--------------HHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCE
T ss_pred ------------------------CCCCHHH--------------HHHHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCc
Confidence 3788888 999999999999999999999 5999999999999
Q ss_pred EEEECCCCCCCcccc----cccccchHHHHhhh
Q 017455 340 CVVMRSRCITTLPVS----KTQRLADMLCRILK 368 (371)
Q Consensus 340 ~v~v~~~~~~~~~l~----~~~~~~~~l~~~l~ 368 (371)
+|+|.++.....++. .++.+++++.+.+.
T Consensus 224 ~i~v~~g~~~~~~l~~~~~~~d~v~~~l~el~~ 256 (264)
T 1yv9_A 224 SLLVTSGFTPKSAVPTLPTPPTYVVDSLDEWTF 256 (264)
T ss_dssp EEEETTSSSCSSSTTTCSSCCSEEESSGGGCCT
T ss_pred EEEECCCCCCHHHHHhcCCCCCEEEecHHHHhh
Confidence 999998876655554 35666666665544
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.1e-18 Score=158.34 Aligned_cols=137 Identities=12% Similarity=0.092 Sum_probs=97.3
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCC------------cHHHHHHHHHcCccccchheeecchhHHhhhhcccc-
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSG------------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFV- 249 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~------------~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v- 249 (371)
.+++||+.++|+.|+++|++++|+||..... ...+...++.+|+. |+.++.+.+.. +.++
T Consensus 49 ~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--f~~~~~~~~~~-----~~~~~ 121 (211)
T 2gmw_A 49 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LDGIYYCPHHP-----QGSVE 121 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCBT-----TCSSG
T ss_pred CcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc--eEEEEECCcCC-----CCccc
Confidence 4589999999999999999999999943000 25678888999987 55543332110 0000
Q ss_pred -ccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHh
Q 017455 250 -LGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQS 328 (371)
Q Consensus 250 -~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~ 328 (371)
.++.+. ..||+|++ |+.+++++|++|++|+||||+.+
T Consensus 122 ~~~~~~~----------------------------~~KP~p~~--------------~~~~~~~lgi~~~~~~~VGD~~~ 159 (211)
T 2gmw_A 122 EFRQVCD----------------------------CRKPHPGM--------------LLSARDYLHIDMAASYMVGDKLE 159 (211)
T ss_dssp GGBSCCS----------------------------SSTTSCHH--------------HHHHHHHHTBCGGGCEEEESSHH
T ss_pred ccCccCc----------------------------CCCCCHHH--------------HHHHHHHcCCCHHHEEEEcCCHH
Confidence 112222 23788888 99999999999999999999999
Q ss_pred hHHHHHHcCCcE-EEECCCCCCCccc-ccccccchHHHHhhh
Q 017455 329 GVAGAQRIGMPC-VVMRSRCITTLPV-SKTQRLADMLCRILK 368 (371)
Q Consensus 329 Di~aA~~aGm~~-v~v~~~~~~~~~l-~~~~~~~~~l~~~l~ 368 (371)
|+.+|+++||++ |++.++....... ..++.+++++.++++
T Consensus 160 Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~~ 201 (211)
T 2gmw_A 160 DMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQ 201 (211)
T ss_dssp HHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHH
T ss_pred HHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHHHH
Confidence 999999999999 9998876543222 235556555555443
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=6.9e-21 Score=169.91 Aligned_cols=164 Identities=15% Similarity=0.116 Sum_probs=114.1
Q ss_pred ceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHHHH
Q 017455 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (371)
Q Consensus 84 ~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 163 (371)
.++||||+||||+|+... +..+|++++. |.+ .++.+.+..+. .... +..+ .+
T Consensus 2 ~k~viFDlDGTL~Ds~~~-~~~~~~~~~~--g~~--~~~~~~~~~~~------~~~~----~~~~-~~------------ 53 (193)
T 2i7d_A 2 SVRVLVDMDGVLADFEAG-LLRGFRRRFP--EEP--HVPLEQRRGFL------AREQ----YRAL-RP------------ 53 (193)
T ss_dssp CEEEEECSBTTTBCHHHH-HHHHHHHHST--TSC--CCCGGGCCSSC------HHHH----HHHH-CT------------
T ss_pred CcEEEEECCCcCccchhH-HHHHHHHHhc--CCC--CCCHHHHHHhh------HHHH----HHHH-hH------------
Confidence 479999999999999987 8899988876 664 23433322211 0011 1111 11
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHC-CCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHh
Q 017455 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNE-GIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (371)
Q Consensus 164 ~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~-Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~ 242 (371)
.+.+.+.+.|.+.......+++||+.++|+.|+++ |++++|+||+. ...+...++.+|+ |+.++ +
T Consensus 54 -~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~---~~~~~~~l~~~gl---f~~i~-~------ 119 (193)
T 2i7d_A 54 -DLADKVASVYEAPGFFLDLEPIPGALDAVREMNDLPDTQVFICTSPL---LKYHHCVGEKYRW---VEQHL-G------ 119 (193)
T ss_dssp -THHHHHHHHHTSTTTTTTCCBCTTHHHHHHHHHTSTTEEEEEEECCC---SSCTTTHHHHHHH---HHHHH-C------
T ss_pred -HHHHHHHHHHHhcCccccCccCcCHHHHHHHHHhCCCCeEEEEeCCC---hhhHHHHHHHhCc---hhhhc-C------
Confidence 11223333333321123567999999999999999 99999999954 5567777888887 55421 1
Q ss_pred hhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEE
Q 017455 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (371)
Q Consensus 243 ~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~ 322 (371)
-.+++++|++|++|+|
T Consensus 120 ----------------------------------------------------------------~~~~~~~~~~~~~~~~ 135 (193)
T 2i7d_A 120 ----------------------------------------------------------------PQFVERIILTRDKTVV 135 (193)
T ss_dssp ----------------------------------------------------------------HHHHTTEEECSCGGGB
T ss_pred ----------------------------------------------------------------HHHHHHcCCCcccEEE
Confidence 1247889999999999
Q ss_pred EeCCHhh----HHHHH-HcCCcEEEECCCCCCCccc
Q 017455 323 IAGSQSG----VAGAQ-RIGMPCVVMRSRCITTLPV 353 (371)
Q Consensus 323 IgDs~~D----i~aA~-~aGm~~v~v~~~~~~~~~l 353 (371)
|||+..| +.+|+ ++||++|++.+++.....+
T Consensus 136 vgDs~~dD~~~i~~A~~~aG~~~i~~~~~~~~~~~~ 171 (193)
T 2i7d_A 136 LGDLLIDDKDTVRGQEETPSWEHILFTCCHNRHLVL 171 (193)
T ss_dssp CCSEEEESSSCCCSSCSSCSSEEEEECCGGGTTCCC
T ss_pred ECCchhhCcHHHhhcccccccceEEEEeccCccccc
Confidence 9999999 99999 9999999998876554443
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=99.75 E-value=1.3e-20 Score=168.85 Aligned_cols=165 Identities=15% Similarity=0.037 Sum_probs=114.8
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHH
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (371)
.++|+|||||||||+|+... +..+|++++.+++ . ++.+.+. +.. +.+ .+..+ . ..+
T Consensus 2 ~~~k~viFDlDGTL~Ds~~~-~~~~~~~~~~~~~-~---~~~~~~~-------~~~--~~~-~~~~~--~----~~~--- 57 (197)
T 1q92_A 2 GRALRVLVDMDGVLADFEGG-FLRKFRARFPDQP-F---IALEDRR-------GFW--VSE-QYGRL--R----PGL--- 57 (197)
T ss_dssp CCCEEEEECSBTTTBCHHHH-HHHHHHHHCTTSC-C---CCGGGCC-------SSC--HHH-HHHHH--S----TTH---
T ss_pred CCceEEEEeCCCCCccCcHH-HHHHHHHHHhcCC-C---CCHHHhc-------CCc--HHH-HHHhc--C----HHH---
Confidence 35789999999999999987 8899999988763 1 3332211 111 111 11111 1 111
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHC-CCcEEEEcCCCCCCcHHHHHHHHHcCccc-cchheeecchh
Q 017455 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNE-GIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGNEE 239 (371)
Q Consensus 162 ~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~-Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~-~f~~~i~~~~~ 239 (371)
.+.+ .+.|.+.......+++||+.++|+.|+++ |++++|+||+. ...+...++++|+.+ +|+.
T Consensus 58 -~~~~----~~~~~~~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~---~~~~~~~l~~~~l~~~~f~~------- 122 (197)
T 1q92_A 58 -SEKA----ISIWESKNFFFELEPLPGAVEAVKEMASLQNTDVFICTSPI---KMFKYCPYEKYAWVEKYFGP------- 122 (197)
T ss_dssp -HHHH----HHHHTSTTTTTTCCBCTTHHHHHHHHHHSTTEEEEEEECCC---SCCSSHHHHHHHHHHHHHCG-------
T ss_pred -HHHH----HHHHHhhhhhhcCCcCcCHHHHHHHHHhcCCCeEEEEeCCc---cchHHHHHHHhchHHHhchH-------
Confidence 1111 12232211123577999999999999999 99999999954 455667788888876 6641
Q ss_pred HHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCc
Q 017455 240 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRN 319 (371)
Q Consensus 240 ~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e 319 (371)
.+++++|++|++
T Consensus 123 --------------------------------------------------------------------~~~~~l~~~~~~ 134 (197)
T 1q92_A 123 --------------------------------------------------------------------DFLEQIVLTRDK 134 (197)
T ss_dssp --------------------------------------------------------------------GGGGGEEECSCS
T ss_pred --------------------------------------------------------------------HHHHHhccCCcc
Confidence 236789999999
Q ss_pred EEEEeCCHhh----HHHHH-HcCCcEEEECCCCCCCccc
Q 017455 320 CFLIAGSQSG----VAGAQ-RIGMPCVVMRSRCITTLPV 353 (371)
Q Consensus 320 ~I~IgDs~~D----i~aA~-~aGm~~v~v~~~~~~~~~l 353 (371)
|++|||+..| +.+|+ ++||++|++.+++.....+
T Consensus 135 ~~~vgDs~~dD~~~~~~a~~~aG~~~i~~~~~~~~~~~~ 173 (197)
T 1q92_A 135 TVVSADLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQL 173 (197)
T ss_dssp TTSCCSEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCC
T ss_pred EEEECcccccCCchhhhcccCCCceEEEecCcccccccc
Confidence 9999999999 99999 9999999998877654443
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=99.75 E-value=2e-18 Score=158.30 Aligned_cols=106 Identities=18% Similarity=0.140 Sum_probs=78.7
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHH
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~ 262 (371)
.+++||+.++|+.|+++|++++|+|| +....+..+++ |+.++ +. +++++.+.. +..+. +
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~---~~~~~~~~~l~--~l~~~-~~-v~~~~~~~~--------~~~~~-~----- 134 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISG---GMDFFVYPLLE--GIVEK-DR-IYCNHASFD--------NDYIH-I----- 134 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEE---EEHHHHHHHHT--TTSCG-GG-EEEEEEECS--------SSBCE-E-----
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeC---CcHHHHHHHHh--cCCCC-Ce-EEeeeeEEc--------CCceE-E-----
Confidence 67999999999999999999999999 44677777777 77665 54 344332211 00000 0
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHH-------HHHHHcCCCCCcEEEEeCCHhhHHHHHH
Q 017455 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALR-------AGAEYAEKPVRNCFLIAGSQSGVAGAQR 335 (371)
Q Consensus 263 ~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~-------~a~~~lgv~p~e~I~IgDs~~Di~aA~~ 335 (371)
...||+|.++ ++ .+++++|++|++|+||||+.+|+.+|++
T Consensus 135 --------------------~~~kp~p~~~-------------~~~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ 181 (236)
T 2fea_A 135 --------------------DWPHSCKGTC-------------SNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKL 181 (236)
T ss_dssp --------------------ECTTCCCTTC-------------CSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHT
T ss_pred --------------------ecCCCCcccc-------------ccccCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHh
Confidence 0137888831 43 7789999999999999999999999999
Q ss_pred cCCcEEE
Q 017455 336 IGMPCVV 342 (371)
Q Consensus 336 aGm~~v~ 342 (371)
+||.++.
T Consensus 182 aG~~~~~ 188 (236)
T 2fea_A 182 SDLCFAR 188 (236)
T ss_dssp CSEEEEC
T ss_pred CCeeeec
Confidence 9999873
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=6.3e-18 Score=149.55 Aligned_cols=132 Identities=15% Similarity=0.193 Sum_probs=87.4
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHH
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~ 262 (371)
.++.||+.++|+.++++|++++++|+ +....+...++.+|+..+|...+...+. ...++...
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~------- 136 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSG---GFDIAVNKIKEKLGLDYAFANRLIVKDG--------KLTGDVEG------- 136 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEE---EEHHHHHHHHHHHTCSEEEEEEEEEETT--------EEEEEEEC-------
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcC---CcHHHHHHHHHHcCCCeEEEeeeEEECC--------EEcCCccc-------
Confidence 45789999999999999999999999 4466777888899998776543322210 00111000
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 263 ~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
++ +...+++.. +..+++++|++|++|++|||+.+|+.+|+.||+.++
T Consensus 137 ---------------------------~~--~~~~~K~~~---l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~- 183 (211)
T 1l7m_A 137 ---------------------------EV--LKENAKGEI---LEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIA- 183 (211)
T ss_dssp ---------------------------SS--CSTTHHHHH---HHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEE-
T ss_pred ---------------------------Cc--cCCccHHHH---HHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEE-
Confidence 00 001111222 899999999999999999999999999999999754
Q ss_pred ECCCCCCCcccccccccchH--HHHhhh
Q 017455 343 MRSRCITTLPVSKTQRLADM--LCRILK 368 (371)
Q Consensus 343 v~~~~~~~~~l~~~~~~~~~--l~~~l~ 368 (371)
+. +. ......++.++++ +.++++
T Consensus 184 ~~-~~--~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 184 FC-AK--PILKEKADICIEKRDLREILK 208 (211)
T ss_dssp ES-CC--HHHHTTCSEEECSSCGGGGGG
T ss_pred EC-CC--HHHHhhcceeecchhHHHHHH
Confidence 43 21 1112345555554 555544
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.3e-17 Score=161.56 Aligned_cols=108 Identities=14% Similarity=0.148 Sum_probs=87.1
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccc---cccCCc
Q 017455 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGK---GISSGV 258 (371)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~---~v~~~~ 258 (371)
..+++||+.++|+.|+++|++++|+|| +....+..+++.+|+..+|...+... +..++|. .+..
T Consensus 176 ~~~~~pg~~~~l~~L~~~g~~~~ivS~---~~~~~~~~~~~~lgl~~~~~~~l~~~--------d~~~tg~~~~~~~~-- 242 (335)
T 3n28_A 176 TLPLMPELPELVATLHAFGWKVAIASG---GFTYFSDYLKEQLSLDYAQSNTLEIV--------SGKLTGQVLGEVVS-- 242 (335)
T ss_dssp TCCCCTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHHTCSEEEEEEEEEE--------TTEEEEEEESCCCC--
T ss_pred hCCcCcCHHHHHHHHHHCCCEEEEEeC---CcHHHHHHHHHHcCCCeEEeeeeEee--------CCeeeeeecccccC--
Confidence 467999999999999999999999999 55888999999999998887543211 1112221 1111
Q ss_pred hhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCC
Q 017455 259 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 338 (371)
Q Consensus 259 ~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm 338 (371)
.||+|++ |+.+++++|++|++|++|||+.+|+.||+++|+
T Consensus 243 --------------------------~kpk~~~--------------~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~ 282 (335)
T 3n28_A 243 --------------------------AQTKADI--------------LLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGL 282 (335)
T ss_dssp --------------------------HHHHHHH--------------HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE
T ss_pred --------------------------hhhhHHH--------------HHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCC
Confidence 2566666 999999999999999999999999999999999
Q ss_pred cEEE
Q 017455 339 PCVV 342 (371)
Q Consensus 339 ~~v~ 342 (371)
.+++
T Consensus 283 ~va~ 286 (335)
T 3n28_A 283 GVAY 286 (335)
T ss_dssp EEEE
T ss_pred eEEe
Confidence 8887
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=99.73 E-value=1.2e-17 Score=148.19 Aligned_cols=102 Identities=12% Similarity=0.187 Sum_probs=87.3
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEcCCCCCC-cHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchh
Q 017455 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSG-DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (371)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~-~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~ 260 (371)
..+++||+.++|+.|+++|++++|+|| +. ...+..+++.+|+..+|+.+++.+
T Consensus 66 ~~~~~~g~~e~L~~L~~~G~~v~ivT~---~~~~~~~~~~l~~~gl~~~f~~~~~~~----------------------- 119 (187)
T 2wm8_A 66 DVRLYPEVPEVLKRLQSLGVPGAAASR---TSEIEGANQLLELFDLFRYFVHREIYP----------------------- 119 (187)
T ss_dssp EECCCTTHHHHHHHHHHHTCCEEEEEC---CSCHHHHHHHHHHTTCTTTEEEEEESS-----------------------
T ss_pred ccCcchhHHHHHHHHHHCCceEEEEeC---CCChHHHHHHHHHcCcHhhcceeEEEe-----------------------
Confidence 356899999999999999999999999 44 478889999999999988643211
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcE
Q 017455 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (371)
Q Consensus 261 ~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~ 340 (371)
+|+|.+ |+.+++++|++|++|+||||+.+|+.+|+++||++
T Consensus 120 -------------------------~~k~~~--------------~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~ 160 (187)
T 2wm8_A 120 -------------------------GSKITH--------------FERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTC 160 (187)
T ss_dssp -------------------------SCHHHH--------------HHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred -------------------------CchHHH--------------HHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEE
Confidence 233334 89999999999999999999999999999999999
Q ss_pred EEECCCCC
Q 017455 341 VVMRSRCI 348 (371)
Q Consensus 341 v~v~~~~~ 348 (371)
|++.++..
T Consensus 161 i~v~~g~~ 168 (187)
T 2wm8_A 161 IHIQNGMN 168 (187)
T ss_dssp EECSSSCC
T ss_pred EEECCCCC
Confidence 99998764
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=99.71 E-value=7.1e-18 Score=148.08 Aligned_cols=115 Identities=11% Similarity=0.144 Sum_probs=81.0
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhH
Q 017455 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (371)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~ 261 (371)
...++||+.++|+.|+++|++++|+||+ ....+... +.+|+.++++.... .++. ..+
T Consensus 77 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~---~~~~~~~~-~~~~~~~~~~~~~~-~~~~--------~~~---------- 133 (201)
T 4ap9_A 77 KVNVSPEARELVETLREKGFKVVLISGS---FEEVLEPF-KELGDEFMANRAIF-EDGK--------FQG---------- 133 (201)
T ss_dssp GCCCCHHHHHHHHHHHHTTCEEEEEEEE---ETTTSGGG-TTTSSEEEEEEEEE-ETTE--------EEE----------
T ss_pred hCCCChhHHHHHHHHHHCCCeEEEEeCC---cHHHHHHH-HHcCchhheeeEEe-eCCc--------eEC----------
Confidence 3579999999999999999999999994 35666777 88898877544322 2111 001
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 017455 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (371)
Q Consensus 262 ~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v 341 (371)
.+|.+.. ...+++++ +|++|++|||+.+|+.+|+.+|+.+
T Consensus 134 -----------------------~~~~~~~--------------k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v- 173 (201)
T 4ap9_A 134 -----------------------IRLRFRD--------------KGEFLKRF--RDGFILAMGDGYADAKMFERADMGI- 173 (201)
T ss_dssp -----------------------EECCSSC--------------HHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEE-
T ss_pred -----------------------CcCCccC--------------HHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceE-
Confidence 1444444 55667777 8999999999999999999999975
Q ss_pred EECCCCCCCcccccccccchHHHH
Q 017455 342 VMRSRCITTLPVSKTQRLADMLCR 365 (371)
Q Consensus 342 ~v~~~~~~~~~l~~~~~~~~~l~~ 365 (371)
.+.++.. .++.+++++.+
T Consensus 174 ~~~~~~~------~ad~v~~~~~e 191 (201)
T 4ap9_A 174 AVGREIP------GADLLVKDLKE 191 (201)
T ss_dssp EESSCCT------TCSEEESSHHH
T ss_pred EECCCCc------cccEEEccHHH
Confidence 4443322 45555444433
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=99.70 E-value=5.6e-18 Score=154.43 Aligned_cols=103 Identities=11% Similarity=0.054 Sum_probs=76.9
Q ss_pred CCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHHHH
Q 017455 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLAT 264 (371)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~ 264 (371)
+.||+.++|+.|+++|++++|+||+. ......+++. +.++|+.++.+.+.. .+.
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~---~~~~~~~l~~--l~~~f~~i~~~~~~~------------~~~--------- 142 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRS---PTKTETVSKT--LADNFHIPATNMNPV------------IFA--------- 142 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSC---CCSSCCHHHH--HHHHTTCCTTTBCCC------------EEC---------
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCc---HHHHHHHHHH--HHHhcCccccccchh------------hhc---------
Confidence 67899999999999999999999964 3333344444 445555421111000 000
Q ss_pred HHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEC
Q 017455 265 EARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 344 (371)
Q Consensus 265 ~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~ 344 (371)
..||+|++ |+.+++++|+ |+||||+.+|+.+|+++||++|++.
T Consensus 143 -------------------~~KP~p~~--------------~~~~~~~~g~----~l~VGDs~~Di~aA~~aG~~~i~v~ 185 (211)
T 2b82_A 143 -------------------GDKPGQNT--------------KSQWLQDKNI----RIFYGDSDNDITAARDVGARGIRIL 185 (211)
T ss_dssp -------------------CCCTTCCC--------------SHHHHHHTTE----EEEEESSHHHHHHHHHTTCEEEECC
T ss_pred -------------------CCCCCHHH--------------HHHHHHHCCC----EEEEECCHHHHHHHHHCCCeEEEEe
Confidence 13899998 9999999998 9999999999999999999999998
Q ss_pred CCCCCC
Q 017455 345 SRCITT 350 (371)
Q Consensus 345 ~~~~~~ 350 (371)
++....
T Consensus 186 ~g~~~~ 191 (211)
T 2b82_A 186 RASNST 191 (211)
T ss_dssp CCTTCS
T ss_pred cCCCCc
Confidence 876543
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.70 E-value=1.9e-17 Score=157.04 Aligned_cols=111 Identities=11% Similarity=0.130 Sum_probs=85.0
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhH
Q 017455 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (371)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~ 261 (371)
..+++||+.++|+.|+++|++++|+|| +....+..+++.+|+.++|+.++
T Consensus 161 ~~~~~~g~~~~l~~L~~~g~~~~i~T~---~~~~~~~~~l~~~gl~~~f~~i~--------------------------- 210 (287)
T 3a1c_A 161 SDTLKESAKPAVQELKRMGIKVGMITG---DNWRSAEAISRELNLDLVIAEVL--------------------------- 210 (287)
T ss_dssp ECCBCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHTCSEEECSCC---------------------------
T ss_pred ccccchhHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHhCCceeeeecC---------------------------
Confidence 357999999999999999999999999 44788899999999998876531
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 017455 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (371)
Q Consensus 262 ~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v 341 (371)
| .+ ...+++++++. ++|+||||+.+|+.+|+++||. |
T Consensus 211 -------------------------~-------~~---------K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~-v 247 (287)
T 3a1c_A 211 -------------------------P-------HQ---------KSEEVKKLQAK-EVVAFVGDGINDAPALAQADLG-I 247 (287)
T ss_dssp -------------------------T-------TC---------HHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEE-E
T ss_pred -------------------------h-------HH---------HHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCee-E
Confidence 0 00 35668899999 9999999999999999999998 4
Q ss_pred EECCCCCCCcccccccccc--hHHHHhh
Q 017455 342 VMRSRCITTLPVSKTQRLA--DMLCRIL 367 (371)
Q Consensus 342 ~v~~~~~~~~~l~~~~~~~--~~l~~~l 367 (371)
.+.++. ......++.++ +++.+++
T Consensus 248 ~~~~~~--~~~~~~ad~v~~~~~~~~l~ 273 (287)
T 3a1c_A 248 AVGSGS--DVAVESGDIVLIRDDLRDVV 273 (287)
T ss_dssp EECCCS--CCSSCCSSEEESSSCTHHHH
T ss_pred EeCCCC--HHHHhhCCEEEeCCCHHHHH
Confidence 444332 22233455565 5554443
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.1e-17 Score=155.71 Aligned_cols=65 Identities=12% Similarity=0.128 Sum_probs=54.7
Q ss_pred HHHHHHHcCCCCCcEEEEeCC-HhhHHHHHHcCCcEEEECCCCCCCcccc----cccccchHHHHhhhhc
Q 017455 306 LRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRSRCITTLPVS----KTQRLADMLCRILKSI 370 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs-~~Di~aA~~aGm~~v~v~~~~~~~~~l~----~~~~~~~~l~~~l~~i 370 (371)
|+.+++++|++|++|++|||+ .+|+.+|+.+|+.+|++.++......+. .++.+++++.++++-|
T Consensus 201 ~~~~~~~lgi~~~e~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~i~~l~el~~~l 270 (271)
T 1vjr_A 201 VDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKAV 270 (271)
T ss_dssp HHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHH
T ss_pred HHHHHHHhCCCCceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHh
Confidence 999999999999999999999 5999999999999999998876544443 4667788887776543
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.68 E-value=7.4e-18 Score=155.07 Aligned_cols=63 Identities=19% Similarity=0.270 Sum_probs=50.9
Q ss_pred HHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCcEEEECCCCCC-Cccc---ccccccchHHHHhhh
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCIT-TLPV---SKTQRLADMLCRILK 368 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~-~Di~aA~~aGm~~v~v~~~~~~-~~~l---~~~~~~~~~l~~~l~ 368 (371)
|+.+++++|++|++|++|||+. +|+.+|+.+|+.+++|.++... .... ..++.+++++.++++
T Consensus 196 ~~~~~~~lgi~~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~el~~ 263 (271)
T 2x4d_A 196 FKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEVKADGYVDNLAEAVD 263 (271)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCGGGGGCSSCCCSEEESSHHHHHH
T ss_pred HHHHHHHhCCCcceEEEECCCcHHHHHHHHHCCCcEEEEcCCCCCchhhcccCCCCCEEeCCHHHHHH
Confidence 9999999999999999999998 9999999999999999987432 2222 235667777666554
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.4e-16 Score=132.36 Aligned_cols=103 Identities=17% Similarity=0.283 Sum_probs=87.6
Q ss_pred CCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHHHH
Q 017455 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLAT 264 (371)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~ 264 (371)
++||+.++|+.|+++|++++|+||.. ...+...++.+|+.++|+.++.+. +.
T Consensus 19 ~~~~~~~~l~~L~~~G~~~~i~S~~~---~~~~~~~l~~~~l~~~f~~i~~~~-~~------------------------ 70 (137)
T 2pr7_A 19 DQRRWRNLLAAAKKNGVGTVILSNDP---GGLGAAPIRELETNGVVDKVLLSG-EL------------------------ 70 (137)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECSC---CGGGGHHHHHHHHTTSSSEEEEHH-HH------------------------
T ss_pred cCccHHHHHHHHHHCCCEEEEEeCCC---HHHHHHHHHHCChHhhccEEEEec-cC------------------------
Confidence 56899999999999999999999954 666778889999999988754322 21
Q ss_pred HHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEC
Q 017455 265 EARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 344 (371)
Q Consensus 265 ~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~ 344 (371)
...||+|++ |+.+++++|++|++|+||||+.+|+.+|+++||.+|++.
T Consensus 71 ------------------~~~Kp~~~~--------------~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~i~~~ 118 (137)
T 2pr7_A 71 ------------------GVEKPEEAA--------------FQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQ 118 (137)
T ss_dssp ------------------SCCTTSHHH--------------HHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEEEECS
T ss_pred ------------------CCCCCCHHH--------------HHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEEEEeC
Confidence 124888888 999999999999999999999999999999999999998
Q ss_pred CCC
Q 017455 345 SRC 347 (371)
Q Consensus 345 ~~~ 347 (371)
++.
T Consensus 119 ~~~ 121 (137)
T 2pr7_A 119 QFD 121 (137)
T ss_dssp CHH
T ss_pred ChH
Confidence 643
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=4.1e-17 Score=141.30 Aligned_cols=84 Identities=19% Similarity=0.114 Sum_probs=74.7
Q ss_pred HHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHHHHHHHHHHh
Q 017455 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (371)
Q Consensus 192 lL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~ 271 (371)
+|+.|+++|++++|+||. ....+..+++++|+.++|...
T Consensus 39 ~l~~l~~~g~~~~i~T~~---~~~~~~~~~~~~gl~~~~~~~-------------------------------------- 77 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGE---KTEIVRRRAEKLKVDYLFQGV-------------------------------------- 77 (164)
T ss_dssp HHHHHHHTTCCEEEECSS---CCHHHHHHHHHTTCSEEECSC--------------------------------------
T ss_pred HHHHHHHCCCEEEEEeCC---ChHHHHHHHHHcCCCEeeccc--------------------------------------
Confidence 688999999999999994 478899999999999887541
Q ss_pred HHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEC
Q 017455 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 344 (371)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~ 344 (371)
||+|++ |+.+++++|++|++|+||||+.+|+.+|+++|+.+++.+
T Consensus 78 --------------kpk~~~--------------~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~ 122 (164)
T 3e8m_A 78 --------------VDKLSA--------------AEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPAS 122 (164)
T ss_dssp --------------SCHHHH--------------HHHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECCTT
T ss_pred --------------CChHHH--------------HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcCC
Confidence 677777 999999999999999999999999999999999877643
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=1.6e-16 Score=147.45 Aligned_cols=87 Identities=16% Similarity=0.215 Sum_probs=69.4
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHHH
Q 017455 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 263 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~ 263 (371)
+++||+.++|+.|+++|++++|+|| +....+..+++.+|+.++|+.++ +.+.+.
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~---~~~~~~~~~~~~~gl~~~f~~~~-~~~k~~---------------------- 197 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTG---DNRFVAKWVAEELGLDDYFAEVL-PHEKAE---------------------- 197 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHTCSEEECSCC-GGGHHH----------------------
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHHHcCChhHhHhcC-HHHHHH----------------------
Confidence 6899999999999999999999999 45788999999999999887642 222211
Q ss_pred HHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 264 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 264 ~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
..||.|+. + +|++|||+.+|+.||+.+|+.+++
T Consensus 198 --------------------~~k~~~~~--------------~------------~~~~vGD~~nDi~~~~~Ag~~va~ 230 (280)
T 3skx_A 198 --------------------KVKEVQQK--------------Y------------VTAMVGDGVNDAPALAQADVGIAI 230 (280)
T ss_dssp --------------------HHHHHHTT--------------S------------CEEEEECTTTTHHHHHHSSEEEEC
T ss_pred --------------------HHHHHHhc--------------C------------CEEEEeCCchhHHHHHhCCceEEe
Confidence 22555555 3 889999999999999999974443
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.7e-17 Score=156.23 Aligned_cols=106 Identities=9% Similarity=0.129 Sum_probs=78.2
Q ss_pred ccHHHHHHHHHHCCCcEEEEcCCCCCCcHHH--H--HHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHH
Q 017455 187 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIA--R--SVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (371)
Q Consensus 187 pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~--~--~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~ 262 (371)
+...++++.|+++|++ +|+||... ... . .++...++.++|+. ++.++.+..
T Consensus 148 ~~~~~l~~~L~~~g~~-~i~tn~~~---~~~~~~~~~~~~~~~l~~~f~~---------------~~~~~~~~~------ 202 (284)
T 2hx1_A 148 HDLNKTVNLLRKRTIP-AIVANTDN---TYPLTKTDVAIAIGGVATMIES---------------ILGRRFIRF------ 202 (284)
T ss_dssp HHHHHHHHHHHHCCCC-EEEECCCS---EEECSSSCEEECHHHHHHHHHH---------------HHCSCEEEE------
T ss_pred ccHHHHHHHHhcCCCe-EEEECCCc---cccCcCCCccccCChHHHHHHH---------------HhCCceeEe------
Confidence 3777788899999999 99999642 211 1 11233445555554 233333322
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHc----CCCCCcEEEEeCCH-hhHHHHHHcC
Q 017455 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA----EKPVRNCFLIAGSQ-SGVAGAQRIG 337 (371)
Q Consensus 263 ~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~l----gv~p~e~I~IgDs~-~Di~aA~~aG 337 (371)
.||+|++ |+.+++++ |++|++|+||||+. +||.+|+++|
T Consensus 203 ----------------------~KP~p~~--------------~~~a~~~l~~~~~~~~~~~~~VGD~~~~Di~~A~~aG 246 (284)
T 2hx1_A 203 ----------------------GKPDSQM--------------FMFAYDMLRQKMEISKREILMVGDTLHTDILGGNKFG 246 (284)
T ss_dssp ----------------------STTSSHH--------------HHHHHHHHHTTSCCCGGGEEEEESCTTTHHHHHHHHT
T ss_pred ----------------------cCCCHHH--------------HHHHHHHHhhccCCCcceEEEECCCcHHHHHHHHHcC
Confidence 2888888 99999999 99999999999995 9999999999
Q ss_pred CcEEEECCCCCCCccc
Q 017455 338 MPCVVMRSRCITTLPV 353 (371)
Q Consensus 338 m~~v~v~~~~~~~~~l 353 (371)
|++|++.++.....++
T Consensus 247 ~~~i~v~~g~~~~~~l 262 (284)
T 2hx1_A 247 LDTALVLTGNTRIDDA 262 (284)
T ss_dssp CEEEEESSSSSCGGGH
T ss_pred CeEEEECCCCCCHHHH
Confidence 9999999887655444
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.6e-16 Score=137.23 Aligned_cols=89 Identities=16% Similarity=0.081 Sum_probs=76.3
Q ss_pred CccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHHHHH
Q 017455 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATE 265 (371)
Q Consensus 186 ~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~ 265 (371)
.|++.++|+.|+++|++++|+||. ....+..+++++|+..+|+.
T Consensus 38 ~~~~~~~l~~l~~~g~~~~i~T~~---~~~~~~~~l~~~gl~~~~~~--------------------------------- 81 (162)
T 2p9j_A 38 NVLDGIGIKLLQKMGITLAVISGR---DSAPLITRLKELGVEEIYTG--------------------------------- 81 (162)
T ss_dssp EHHHHHHHHHHHTTTCEEEEEESC---CCHHHHHHHHHTTCCEEEEC---------------------------------
T ss_pred cccHHHHHHHHHHCCCEEEEEeCC---CcHHHHHHHHHcCCHhhccC---------------------------------
Confidence 456678999999999999999994 47889999999999887643
Q ss_pred HHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEE
Q 017455 266 ARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (371)
Q Consensus 266 ~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v 343 (371)
.||+|++ |+.+++++|++|++|+||||+.+|+.+|+++|+.+++.
T Consensus 82 -------------------~kp~~~~--------------~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~ 126 (162)
T 2p9j_A 82 -------------------SYKKLEI--------------YEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVR 126 (162)
T ss_dssp -------------------C--CHHH--------------HHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT
T ss_pred -------------------CCCCHHH--------------HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEec
Confidence 1677777 99999999999999999999999999999999997754
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.61 E-value=3.9e-15 Score=138.40 Aligned_cols=65 Identities=14% Similarity=0.245 Sum_probs=56.5
Q ss_pred HHHHHHHcCCCCCcEEEEeCC-HhhHHHHHHcCCcEEEECCCCCCCcccc--------cccccchHHHHhhhhc
Q 017455 306 LRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRSRCITTLPVS--------KTQRLADMLCRILKSI 370 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs-~~Di~aA~~aGm~~v~v~~~~~~~~~l~--------~~~~~~~~l~~~l~~i 370 (371)
|+.+++++|++|++|++|||+ .+|+.+|+++|+++|+|.++......+. .++++++++.++++-|
T Consensus 193 ~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~~~el~~~l 266 (268)
T 3qgm_A 193 MREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIERHGLKPDYVFNSLKDMVEAL 266 (268)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEESSHHHHHHTC
T ss_pred HHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHHhhccccCCCCCEEECCHHHHHHHH
Confidence 999999999999999999999 5999999999999999999887666655 5677888877776544
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=3.6e-17 Score=156.13 Aligned_cols=129 Identities=10% Similarity=0.036 Sum_probs=89.0
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHH-HHHHHcC-ccccchheeecchhHHhhhhccccccccccCCchh
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIAR-SVVEKLG-SERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~-~~l~~lg-l~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~ 260 (371)
..++|++.++++.|+++|+ ++++||...... ... ..+..+| +..+ |+.++..+.+..+
T Consensus 155 ~~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~-~~~~~~~~~~g~l~~~---------------~~~~~~~~~~~~~--- 214 (306)
T 2oyc_A 155 HFSFAKLREACAHLRDPEC-LLVATDRDPWHP-LSDGSRTPGTGSLAAA---------------VETASGRQALVVG--- 214 (306)
T ss_dssp TCCHHHHHHHHHHHTSTTS-EEEESCCCCEEE-CTTSCEEECHHHHHHH---------------HHHHHTCCCEECS---
T ss_pred CCCHHHHHHHHHHHHcCCC-EEEEEcCCcccc-CCCCCcCCCCcHHHHH---------------HHHHhCCCceeeC---
Confidence 4568999999999999999 999999642110 000 1111112 2222 3333333333333
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCc
Q 017455 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMP 339 (371)
Q Consensus 261 ~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~-~Di~aA~~aGm~ 339 (371)
||+|.+ |+.+++++|++|++|++|||+. +||.+|+++||+
T Consensus 215 -------------------------KP~~~~--------------~~~~~~~lgi~~~e~l~vGD~~~~Di~~a~~aG~~ 255 (306)
T 2oyc_A 215 -------------------------KPSPYM--------------FECITENFSIDPARTLMVGDRLETDILFGHRCGMT 255 (306)
T ss_dssp -------------------------TTSTHH--------------HHHHHHHSCCCGGGEEEEESCTTTHHHHHHHHTCE
T ss_pred -------------------------CCCHHH--------------HHHHHHHcCCChHHEEEECCCchHHHHHHHHCCCe
Confidence 788887 9999999999999999999996 999999999999
Q ss_pred EEEECCCCCCCccc----------ccccccchHHHHhhhhc
Q 017455 340 CVVMRSRCITTLPV----------SKTQRLADMLCRILKSI 370 (371)
Q Consensus 340 ~v~v~~~~~~~~~l----------~~~~~~~~~l~~~l~~i 370 (371)
+|+|.+|......+ ..++.+++++.++++.|
T Consensus 256 ~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~el~~~l 296 (306)
T 2oyc_A 256 TVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTEGL 296 (306)
T ss_dssp EEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGGGGGGGC
T ss_pred EEEECCCCCCHHHHHhhhcccccCCCCCEEECCHHHHHHHH
Confidence 99999887654333 23556667666665543
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.61 E-value=6.5e-17 Score=142.90 Aligned_cols=82 Identities=11% Similarity=0.133 Sum_probs=70.7
Q ss_pred HHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHHHHHHHHHHh
Q 017455 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (371)
Q Consensus 192 lL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~ 271 (371)
+|+.|+++|++++|+|| +....+..+++.+|++ +|...
T Consensus 47 ~l~~L~~~g~~~~i~T~---~~~~~~~~~~~~lgi~-~~~~~-------------------------------------- 84 (176)
T 3mmz_A 47 GIAALRKSGLTMLILST---EQNPVVAARARKLKIP-VLHGI-------------------------------------- 84 (176)
T ss_dssp HHHHHHHTTCEEEEEES---SCCHHHHHHHHHHTCC-EEESC--------------------------------------
T ss_pred HHHHHHHCCCeEEEEEC---cChHHHHHHHHHcCCe-eEeCC--------------------------------------
Confidence 78999999999999999 4478899999999998 54321
Q ss_pred HHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEE
Q 017455 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (371)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v 343 (371)
||.|+. ++.+++++|+++++|++|||+.+|+.+++.+|+.+++.
T Consensus 85 --------------~~k~~~--------------l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~ 128 (176)
T 3mmz_A 85 --------------DRKDLA--------------LKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVA 128 (176)
T ss_dssp --------------SCHHHH--------------HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT
T ss_pred --------------CChHHH--------------HHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECC
Confidence 455555 99999999999999999999999999999999876653
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.61 E-value=8.8e-17 Score=146.83 Aligned_cols=84 Identities=8% Similarity=0.050 Sum_probs=73.3
Q ss_pred HHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHHHHHHHHHHh
Q 017455 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (371)
Q Consensus 192 lL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~ 271 (371)
+|+.|+++|++++|+|| +....+..+++.+|+..+|..+
T Consensus 84 ~L~~L~~~G~~l~I~T~---~~~~~~~~~l~~lgi~~~f~~~-------------------------------------- 122 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITG---RRAKLLEDRANTLGITHLYQGQ-------------------------------------- 122 (211)
T ss_dssp HHHHHHHTTCEEEEECS---SCCHHHHHHHHHHTCCEEECSC--------------------------------------
T ss_pred HHHHHHHCCCEEEEEeC---CCHHHHHHHHHHcCCchhhccc--------------------------------------
Confidence 88999999999999999 4578899999999999887642
Q ss_pred HHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEC
Q 017455 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 344 (371)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~ 344 (371)
||.|++ ++.+++++|++|++|++|||+.+|+.+++++|+.+++..
T Consensus 123 --------------k~K~~~--------------l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~ 167 (211)
T 3ij5_A 123 --------------SDKLVA--------------YHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVAD 167 (211)
T ss_dssp --------------SSHHHH--------------HHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTT
T ss_pred --------------CChHHH--------------HHHHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeCC
Confidence 344444 899999999999999999999999999999999877643
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=99.60 E-value=1.3e-15 Score=138.35 Aligned_cols=135 Identities=14% Similarity=0.157 Sum_probs=96.6
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCc---------------HHHHHHHHHcCccccchheeecchhHHhhhhcc
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGD---------------RIARSVVEKLGSERISKIKIVGNEEVERSLYGQ 247 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~---------------~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~ 247 (371)
.+++||+.++|+.|+++|++++|+||. .. ..+...++.+|+. |+..+.+..... +.
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~---~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--~~~~~~~~~~~~----g~ 125 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQ---SGIARGYFGWSAFAAVNGRVLELLREEGVF--VDMVLACAYHEA----GV 125 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEEC---HHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCCTT----CC
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCc---CCCCcccccHHHHHHHHHHHHHHHHHcCCc--eeeEEEeecCCC----Cc
Confidence 458999999999999999999999994 34 5677888898875 332211110000 00
Q ss_pred cc-ccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 017455 248 FV-LGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS 326 (371)
Q Consensus 248 ~v-~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs 326 (371)
++ ..+.+. ..||+|.+ |+.+++++|++|++|+||||+
T Consensus 126 ~~~~~~~~~----------------------------~~KP~~~~--------------~~~~~~~~~i~~~~~~~VGD~ 163 (218)
T 2o2x_A 126 GPLAIPDHP----------------------------MRKPNPGM--------------LVEAGKRLALDLQRSLIVGDK 163 (218)
T ss_dssp STTCCSSCT----------------------------TSTTSCHH--------------HHHHHHHHTCCGGGCEEEESS
T ss_pred eeecccCCc----------------------------cCCCCHHH--------------HHHHHHHcCCCHHHEEEEeCC
Confidence 00 001111 34788888 999999999999999999999
Q ss_pred HhhHHHHHHcCCcE-EEECCCCCCCccc-ccccccchHHHHhhh
Q 017455 327 QSGVAGAQRIGMPC-VVMRSRCITTLPV-SKTQRLADMLCRILK 368 (371)
Q Consensus 327 ~~Di~aA~~aGm~~-v~v~~~~~~~~~l-~~~~~~~~~l~~~l~ 368 (371)
.+||.+|+++||++ |++.++....... ..++.+++++.++++
T Consensus 164 ~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~~l~el~~ 207 (218)
T 2o2x_A 164 LADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGDLLA 207 (218)
T ss_dssp HHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecccHHHHHH
Confidence 99999999999999 9999886544332 245566666666554
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=4.4e-16 Score=137.54 Aligned_cols=111 Identities=12% Similarity=0.135 Sum_probs=84.4
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCC------------CcHHHHHHHHHcCccccchheeecchhHHhhhhccccc
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS------------GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 250 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~------------~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~ 250 (371)
.+++||+.++|+.|+++|++++|+||.... ....+..+++.+|+. |+.++++....
T Consensus 41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~v~~s~~~~---------- 108 (176)
T 2fpr_A 41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLP---------- 108 (176)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCG----------
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--eeEEEEcCCCC----------
Confidence 458999999999999999999999995200 356788889999987 76654431000
Q ss_pred cccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhH
Q 017455 251 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 330 (371)
Q Consensus 251 g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di 330 (371)
.+.+ ...||+|++ |+.+++++|++|++||||||+.+|+
T Consensus 109 ~~~~----------------------------~~~KP~p~~--------------~~~~~~~~gi~~~~~l~VGD~~~Di 146 (176)
T 2fpr_A 109 ADEC----------------------------DCRKPKVKL--------------VERYLAEQAMDRANSYVIGDRATDI 146 (176)
T ss_dssp GGCC----------------------------SSSTTSCGG--------------GGGGC----CCGGGCEEEESSHHHH
T ss_pred cccc----------------------------cccCCCHHH--------------HHHHHHHcCCCHHHEEEEcCCHHHH
Confidence 0111 134899999 9999999999999999999999999
Q ss_pred HHHHHcCCcEEEECCCC
Q 017455 331 AGAQRIGMPCVVMRSRC 347 (371)
Q Consensus 331 ~aA~~aGm~~v~v~~~~ 347 (371)
.+|+++||++|++.++.
T Consensus 147 ~~A~~aG~~~i~v~~~~ 163 (176)
T 2fpr_A 147 QLAENMGINGLRYDRET 163 (176)
T ss_dssp HHHHHHTSEEEECBTTT
T ss_pred HHHHHcCCeEEEEcCCc
Confidence 99999999999998763
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.59 E-value=2.8e-16 Score=146.54 Aligned_cols=123 Identities=10% Similarity=0.050 Sum_probs=85.1
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHH--HHHHHH-cCccccchheeecchhHHhhhhccccccccccCCch
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIA--RSVVEK-LGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVD 259 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~--~~~l~~-lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~ 259 (371)
..++|++.++++.|+ +|+++ |+||... ... ...+.. .++..+| +.++..+.+..+
T Consensus 129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~~---~~~~~~~~l~~~~~l~~~~---------------~~~~~~~~~~~~-- 186 (263)
T 1zjj_A 129 DLTYEKLKYATLAIR-NGATF-IGTNPDA---TLPGEEGIYPGAGSIIAAL---------------KVATNVEPIIIG-- 186 (263)
T ss_dssp TCBHHHHHHHHHHHH-TTCEE-EESCCCS---EEEETTEEEECHHHHHHHH---------------HHHHCCCCEECS--
T ss_pred CCCHHHHHHHHHHHH-CCCEE-EEECCCc---cccCCCCCcCCcHHHHHHH---------------HHHhCCCccEec--
Confidence 467999999999999 89998 9999642 111 011111 2223333 333333333333
Q ss_pred hHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCC
Q 017455 260 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGM 338 (371)
Q Consensus 260 ~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~-~Di~aA~~aGm 338 (371)
||+|++ |+.++++ ++|++|+||||+. +||.+|+++||
T Consensus 187 --------------------------KP~~~~--------------~~~~~~~--~~~~~~~~VGD~~~~Di~~A~~aG~ 224 (263)
T 1zjj_A 187 --------------------------KPNEPM--------------YEVVREM--FPGEELWMVGDRLDTDIAFAKKFGM 224 (263)
T ss_dssp --------------------------TTSHHH--------------HHHHHHH--STTCEEEEEESCTTTHHHHHHHTTC
T ss_pred --------------------------CCCHHH--------------HHHHHHh--CCcccEEEECCChHHHHHHHHHcCC
Confidence 788888 9999999 9999999999996 99999999999
Q ss_pred cEEEECCCCCCCcccc----cccccchHHHHhhhh
Q 017455 339 PCVVMRSRCITTLPVS----KTQRLADMLCRILKS 369 (371)
Q Consensus 339 ~~v~v~~~~~~~~~l~----~~~~~~~~l~~~l~~ 369 (371)
.+|+|.++......+. .++.+++++.+.++-
T Consensus 225 ~~i~v~~g~~~~~~~~~~~~~p~~~~~~l~el~~~ 259 (263)
T 1zjj_A 225 KAIMVLTGVSSLEDIKKSEYKPDLVLPSVYELIDY 259 (263)
T ss_dssp EEEEESSSSCCHHHHTTCSSCCSEEESSGGGGGGG
T ss_pred eEEEECCCCCChHHHHhcCCCCCEEECCHHHHHHH
Confidence 9999998876544433 355666666655543
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.58 E-value=1.8e-16 Score=141.69 Aligned_cols=83 Identities=11% Similarity=0.131 Sum_probs=71.2
Q ss_pred HHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHHHHHHHHHHh
Q 017455 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (371)
Q Consensus 192 lL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~ 271 (371)
+|+.|+++|++++|+|| +....+..+++.+|+.++|+.+
T Consensus 54 ~l~~L~~~g~~~~i~T~---~~~~~~~~~~~~lgl~~~f~~~-------------------------------------- 92 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISG---RKTAIVERRAKSLGIEHLFQGR-------------------------------------- 92 (189)
T ss_dssp HHHHHHHTTCEEEEECS---SCCHHHHHHHHHHTCSEEECSC--------------------------------------
T ss_pred HHHHHHHCCCEEEEEEC---cChHHHHHHHHHcCCHHHhcCc--------------------------------------
Confidence 78999999999999999 4478899999999999887642
Q ss_pred HHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEE
Q 017455 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (371)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v 343 (371)
++.|++ ++.+++++|++|++|++|||+.+|+.+|+++|+.+++.
T Consensus 93 --------------~~K~~~--------------~~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~ 136 (189)
T 3mn1_A 93 --------------EDKLVV--------------LDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVA 136 (189)
T ss_dssp --------------SCHHHH--------------HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT
T ss_pred --------------CChHHH--------------HHHHHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEeC
Confidence 111233 89999999999999999999999999999999986653
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=99.57 E-value=2.1e-15 Score=140.50 Aligned_cols=71 Identities=10% Similarity=0.089 Sum_probs=59.0
Q ss_pred hccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCC-HhhHHHHHHcCCcEEEECCCCCCCcccc----cccc
Q 017455 284 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRSRCITTLPVS----KTQR 358 (371)
Q Consensus 284 ~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs-~~Di~aA~~aGm~~v~v~~~~~~~~~l~----~~~~ 358 (371)
..||+|.+ |+.+++++|++|++|++|||+ .+||.+|+++|+++|+|.+|......+. .+++
T Consensus 180 ~~Kp~~~~--------------~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~pd~ 245 (264)
T 3epr_A 180 IGKPNAII--------------MNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSY 245 (264)
T ss_dssp CSTTSHHH--------------HHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCGGGGGGCSSCCSE
T ss_pred CCCCCHHH--------------HHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCE
Confidence 34777777 999999999999999999999 6999999999999999999887766665 4566
Q ss_pred cchHHHHhhh
Q 017455 359 LADMLCRILK 368 (371)
Q Consensus 359 ~~~~l~~~l~ 368 (371)
+++++.+++.
T Consensus 246 ~~~~l~~l~~ 255 (264)
T 3epr_A 246 VLASLDEWTF 255 (264)
T ss_dssp EESCGGGCCS
T ss_pred EECCHHHHhc
Confidence 6666665543
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.57 E-value=7.6e-15 Score=129.00 Aligned_cols=114 Identities=12% Similarity=0.080 Sum_probs=63.2
Q ss_pred CceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHHH
Q 017455 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (371)
Q Consensus 83 ~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~ 162 (371)
.+++|||||||||+|++.. +..+|++ .+|.+ ++.+.+. |.... . . ++. . .+
T Consensus 3 m~~~viFD~DGtL~Ds~~~-~~~~~~~---~~g~~---~~~~~~~-------g~~~~--~-~---~~~--~--~~----- 53 (180)
T 3bwv_A 3 TRQRIAIDMDEVLADTLGA-VVKAVNE---RADLN---IKMESLN-------GKKLK--H-M---IPE--H--EG----- 53 (180)
T ss_dssp CCCEEEEETBTTTBCHHHH-HHHHHHH---HSCCC---CCGGGCT-------TCCC------------------C-----
T ss_pred cccEEEEeCCCcccccHHH-HHHHHHH---HhCCC---CCHHHHc-------CccHH--H-H---CCc--h--HH-----
Confidence 3589999999999999986 7777776 56765 3333221 11100 0 0 110 0 00
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCc--HHHHHHHHH-cCccccchh
Q 017455 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGD--RIARSVVEK-LGSERISKI 232 (371)
Q Consensus 163 ~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~--~~~~~~l~~-lgl~~~f~~ 232 (371)
.+.+.. +.+.+ ....+++||+.++|+.|++. ++++|+||+..... ......+.. ++...+|+.
T Consensus 54 --~~~~~~---~~~~~-~~~~~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~ 119 (180)
T 3bwv_A 54 --LVMDIL---KEPGF-FRNLDVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHF 119 (180)
T ss_dssp --HHHHHH---HSTTG-GGSCCBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGE
T ss_pred --HHHHHH---hCcch-hccCCCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccE
Confidence 111111 11111 22477999999999999985 99999999521022 122333444 455555544
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=5.2e-15 Score=148.20 Aligned_cols=100 Identities=18% Similarity=0.222 Sum_probs=79.4
Q ss_pred CCccHHHHHHHHHHCCCcEEEEcCCCC------CCc---HHHHHHHHHcCccccchheeecchhHHhhhhcccccccccc
Q 017455 185 LRPGVEDFVDDAYNEGIPLIVLTAYGK------SGD---RIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 255 (371)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~IvTn~~~------~~~---~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~ 255 (371)
++||+.++|+.|+++|++++|+||... +.. ..+..+++.+|+. |+.++ ++++ +.
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~--fd~i~-~~~~--------------~~ 150 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLV-ATHA--------------GL 150 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC--CEEEE-ECSS--------------ST
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC--EEEEE-ECCC--------------CC
Confidence 789999999999999999999999320 001 2267788889884 66533 2222 21
Q ss_pred CCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcC----CCCCcEEEEeCCH----
Q 017455 256 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE----KPVRNCFLIAGSQ---- 327 (371)
Q Consensus 256 ~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lg----v~p~e~I~IgDs~---- 327 (371)
..||+|++ |+.+++++| ++|++|+||||+.
T Consensus 151 ----------------------------~~KP~p~~--------------~~~a~~~l~~~~~v~~~~~l~VGDs~gr~~ 188 (416)
T 3zvl_A 151 ----------------------------NRKPVSGM--------------WDHLQEQANEGIPISVEDSVFVGDAAGRLA 188 (416)
T ss_dssp ----------------------------TSTTSSHH--------------HHHHHHHSSTTCCCCGGGCEEECSCSCBCT
T ss_pred ----------------------------CCCCCHHH--------------HHHHHHHhCCCCCCCHHHeEEEECCCCCcc
Confidence 23899999 999999998 9999999999997
Q ss_pred -------------hhHHHHHHcCCcEEEE
Q 017455 328 -------------SGVAGAQRIGMPCVVM 343 (371)
Q Consensus 328 -------------~Di~aA~~aGm~~v~v 343 (371)
.|+.+|+++||+++..
T Consensus 189 ~~~~~~~~~d~s~~Di~~A~~aGi~f~~p 217 (416)
T 3zvl_A 189 NWAPGRKKKDFSCADRLFALNVGLPFATP 217 (416)
T ss_dssp TSSTTCCSCCSCCHHHHHHHHHTCCEECH
T ss_pred cccccccccCCChhhHHHHHHcCCcccCc
Confidence 8999999999998864
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.54 E-value=2.9e-15 Score=135.03 Aligned_cols=83 Identities=14% Similarity=0.115 Sum_probs=72.3
Q ss_pred HHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHHHHHHHHHHh
Q 017455 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (371)
Q Consensus 192 lL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~ 271 (371)
.|+.|+++|++++|+|| +....+..+++.+|+.++|...
T Consensus 60 ~l~~L~~~G~~~~ivT~---~~~~~~~~~l~~lgi~~~~~~~-------------------------------------- 98 (195)
T 3n07_A 60 GVKALMNAGIEIAIITG---RRSQIVENRMKALGISLIYQGQ-------------------------------------- 98 (195)
T ss_dssp HHHHHHHTTCEEEEECS---SCCHHHHHHHHHTTCCEEECSC--------------------------------------
T ss_pred HHHHHHHCCCEEEEEEC---cCHHHHHHHHHHcCCcEEeeCC--------------------------------------
Confidence 37889999999999999 4588999999999999876541
Q ss_pred HHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEE
Q 017455 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (371)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v 343 (371)
||.|.. ++.+++++|++|++|++|||+.+|+.+++++|+.+++.
T Consensus 99 --------------k~k~~~--------------~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~ 142 (195)
T 3n07_A 99 --------------DDKVQA--------------YYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVA 142 (195)
T ss_dssp --------------SSHHHH--------------HHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECT
T ss_pred --------------CCcHHH--------------HHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEEC
Confidence 555555 99999999999999999999999999999999987653
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=5.2e-16 Score=145.72 Aligned_cols=113 Identities=12% Similarity=0.157 Sum_probs=87.6
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhH
Q 017455 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (371)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~ 261 (371)
..+++||+.++|+.|+++|++++++|| +....+..+++.+|+.++|+.++
T Consensus 134 ~~~~~~g~~~~l~~L~~~g~~~~i~T~---~~~~~~~~~~~~~gl~~~f~~~~--------------------------- 183 (263)
T 2yj3_A 134 SDVPRPNLKDYLEKLKNEGLKIIILSG---DKEDKVKELSKELNIQEYYSNLS--------------------------- 183 (263)
Confidence 356999999999999999999999999 44788899999999998886531
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 017455 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (371)
Q Consensus 262 ~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v 341 (371)
|+. +..++++++.++++|+||||+.+|+.+|+++|+.+.
T Consensus 184 ---------------------------p~~--------------k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va 222 (263)
T 2yj3_A 184 ---------------------------PED--------------KVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVA 222 (263)
Confidence 111 566789999999999999999999999999998655
Q ss_pred EECCCCCCCcccccccccc--hHHHHhhh
Q 017455 342 VMRSRCITTLPVSKTQRLA--DMLCRILK 368 (371)
Q Consensus 342 ~v~~~~~~~~~l~~~~~~~--~~l~~~l~ 368 (371)
+- .........++.++ +++.++++
T Consensus 223 ~g---~~~~~~~~~ad~v~~~~~l~~l~~ 248 (263)
T 2yj3_A 223 MG---NGVDISKNVADIILVSNDIGTLLG 248 (263)
Confidence 43 22223334556666 66665544
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=8.8e-15 Score=129.26 Aligned_cols=86 Identities=14% Similarity=0.017 Sum_probs=74.4
Q ss_pred HHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHHHHHHHH
Q 017455 189 VEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARK 268 (371)
Q Consensus 189 v~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k 268 (371)
..++|+.|+++|++++++||. ....+..+++.+|+..+|+..
T Consensus 40 ~~~~l~~L~~~G~~~~i~Tg~---~~~~~~~~~~~lgl~~~~~~~----------------------------------- 81 (180)
T 1k1e_A 40 DGLGIKMLMDADIQVAVLSGR---DSPILRRRIADLGIKLFFLGK----------------------------------- 81 (180)
T ss_dssp HHHHHHHHHHTTCEEEEEESC---CCHHHHHHHHHHTCCEEEESC-----------------------------------
T ss_pred hHHHHHHHHHCCCeEEEEeCC---CcHHHHHHHHHcCCceeecCC-----------------------------------
Confidence 346899999999999999994 478899999999998876431
Q ss_pred HHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEE
Q 017455 269 AVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (371)
Q Consensus 269 ~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v 343 (371)
||.|++ ++.+++++|++|++|++|||+.+|+.+++.+|+.+++.
T Consensus 82 -----------------k~k~~~--------------~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~ 125 (180)
T 1k1e_A 82 -----------------LEKETA--------------CFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA 125 (180)
T ss_dssp -----------------SCHHHH--------------HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT
T ss_pred -----------------CCcHHH--------------HHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeC
Confidence 555555 99999999999999999999999999999999998864
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=1.1e-14 Score=129.52 Aligned_cols=83 Identities=11% Similarity=0.089 Sum_probs=72.9
Q ss_pred HHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHHHHHHHHHHh
Q 017455 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (371)
Q Consensus 192 lL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~ 271 (371)
+|+.|+++|++++|+||. ....+..+++.+|+..+|..
T Consensus 61 ~l~~L~~~g~~v~ivT~~---~~~~~~~~l~~lgl~~~~~~--------------------------------------- 98 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGR---KAKLVEDRCATLGITHLYQG--------------------------------------- 98 (188)
T ss_dssp HHHHHHTTTCEEEEECSS---CCHHHHHHHHHHTCCEEECS---------------------------------------
T ss_pred HHHHHHHCCCeEEEEeCC---ChHHHHHHHHHcCCceeecC---------------------------------------
Confidence 788999999999999994 47889999999999877643
Q ss_pred HHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEE
Q 017455 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (371)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v 343 (371)
.||.|++ |+.+++++|++|++|+||||+.+|+.+|+++|+.+++.
T Consensus 99 -------------~kpk~~~--------------~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~ 143 (188)
T 2r8e_A 99 -------------QSNKLIA--------------FSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVA 143 (188)
T ss_dssp -------------CSCSHHH--------------HHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECT
T ss_pred -------------CCCCHHH--------------HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEec
Confidence 1666666 99999999999999999999999999999999998764
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.52 E-value=1.8e-14 Score=133.81 Aligned_cols=64 Identities=8% Similarity=0.181 Sum_probs=51.5
Q ss_pred HHHHHHHcCCCCCcEEEEeCC-HhhHHHHHHcCCcEEEECCCCCCCccccc----ccccchHHHHhhhh
Q 017455 306 LRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRSRCITTLPVSK----TQRLADMLCRILKS 369 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs-~~Di~aA~~aGm~~v~v~~~~~~~~~l~~----~~~~~~~l~~~l~~ 369 (371)
|+.+++++|++++++++|||+ .+||.+|+.+|+.++++.+|......+.. ++++++++.++.+.
T Consensus 189 ~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~~~~el~~~ 257 (266)
T 3pdw_A 189 MEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHAIDSLTEWIPY 257 (266)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEEESSGGGGHHH
T ss_pred HHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEeCCHHHHHHH
Confidence 999999999999999999999 79999999999999999998877666654 67777777776654
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.52 E-value=7.7e-15 Score=131.40 Aligned_cols=82 Identities=13% Similarity=0.087 Sum_probs=72.6
Q ss_pred HHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHHHHHHHHHHh
Q 017455 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (371)
Q Consensus 192 lL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~ 271 (371)
.|+.|+++|++++|+||. ....+...++.+|+..+|+..
T Consensus 54 ~l~~L~~~g~~~~ivTn~---~~~~~~~~l~~lgl~~~~~~~-------------------------------------- 92 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTA---QNAVVDHRMEQLGITHYYKGQ-------------------------------------- 92 (191)
T ss_dssp HHHHHHHTTCEEEEECSC---CSHHHHHHHHHHTCCEEECSC--------------------------------------
T ss_pred HHHHHHHCCCeEEEEeCc---ChHHHHHHHHHcCCccceeCC--------------------------------------
Confidence 478889999999999994 478899999999999877642
Q ss_pred HHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
||.|++ ++.+++++|++|++|+||||+.+|+.+++.+|+.+++
T Consensus 93 --------------kpk~~~--------------~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~ 135 (191)
T 3n1u_A 93 --------------VDKRSA--------------YQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAV 135 (191)
T ss_dssp --------------SSCHHH--------------HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred --------------CChHHH--------------HHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCEEEe
Confidence 666666 9999999999999999999999999999999999854
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.44 E-value=3.5e-14 Score=133.78 Aligned_cols=112 Identities=18% Similarity=0.049 Sum_probs=73.4
Q ss_pred CCCccHHHHHHHHHHC-CCcEEEEcCCCCC------------------CcHHHHHHHHHcCccccchheeecchhHHhhh
Q 017455 184 PLRPGVEDFVDDAYNE-GIPLIVLTAYGKS------------------GDRIARSVVEKLGSERISKIKIVGNEEVERSL 244 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~-Gi~v~IvTn~~~~------------------~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~ 244 (371)
.+++++.++++.++++ |+++++.|+.... ....+..+++.+|+..+|... . .. .+.
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---~-~~-~~~ 196 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRC---N-PL-AGD 196 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEEC---C-GG-GTC
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEc---c-cc-ccC
Confidence 5789999999999998 9999999973100 234556667777776555321 0 00 000
Q ss_pred hccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEe
Q 017455 245 YGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIA 324 (371)
Q Consensus 245 f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~Ig 324 (371)
.+....++.+..+ ||.+.. ++.+++++|++|++|++||
T Consensus 197 ~~~~~~~~~~~~~----------------------------~~k~~~--------------~~~~~~~~~~~~~~~~~~G 234 (289)
T 3gyg_A 197 PEDSYDVDFIPIG----------------------------TGKNEI--------------VTFMLEKYNLNTERAIAFG 234 (289)
T ss_dssp CTTEEEEEEEESC----------------------------CSHHHH--------------HHHHHHHHTCCGGGEEEEE
T ss_pred CCCceEEEEEeCC----------------------------CCHHHH--------------HHHHHHHcCCChhhEEEEc
Confidence 0000111111111 222333 8999999999999999999
Q ss_pred CCHhhHHHHHHcCCcEEE
Q 017455 325 GSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 325 Ds~~Di~aA~~aGm~~v~ 342 (371)
|+.+|+.+++.+|+.+++
T Consensus 235 Ds~~D~~~~~~ag~~~~~ 252 (289)
T 3gyg_A 235 DSGNDVRMLQTVGNGYLL 252 (289)
T ss_dssp CSGGGHHHHTTSSEEEEC
T ss_pred CCHHHHHHHHhCCcEEEE
Confidence 999999999999976544
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=99.39 E-value=5.3e-13 Score=126.70 Aligned_cols=104 Identities=13% Similarity=0.028 Sum_probs=81.9
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHH--------cCccccchheeecchhHHhhhhccccccccc
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK--------LGSERISKIKIVGNEEVERSLYGQFVLGKGI 254 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~--------lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v 254 (371)
.+++||+.++|+.|+++|++++|+||........+...++. +|+ .|+.++.++ +.
T Consensus 187 ~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~-~~-------------- 249 (301)
T 1ltq_A 187 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV--PLVMQCQRE-QG-------------- 249 (301)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC--CCSEEEECC-TT--------------
T ss_pred cCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC--Cchheeecc-CC--------------
Confidence 45799999999999999999999999653323334566777 888 366543322 11
Q ss_pred cCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCc-EEEEeCCHhhHHHH
Q 017455 255 SSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRN-CFLIAGSQSGVAGA 333 (371)
Q Consensus 255 ~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e-~I~IgDs~~Di~aA 333 (371)
..||+|++ +..++++++.++.+ |+||||+..|+.+|
T Consensus 250 -----------------------------~~kp~p~~--------------~~~~~~~~~~~~~~~~~~vgD~~~di~~a 286 (301)
T 1ltq_A 250 -----------------------------DTRKDDVV--------------KEEIFWKHIAPHFDVKLAIDDRTQVVEMW 286 (301)
T ss_dssp -----------------------------CCSCHHHH--------------HHHHHHHHTTTTCEEEEEEECCHHHHHHH
T ss_pred -----------------------------CCcHHHHH--------------HHHHHHHHhccccceEEEeCCcHHHHHHH
Confidence 11777777 89999999888755 79999999999999
Q ss_pred HHcCCcEEEECCC
Q 017455 334 QRIGMPCVVMRSR 346 (371)
Q Consensus 334 ~~aGm~~v~v~~~ 346 (371)
+++||++|+|.+|
T Consensus 287 ~~aG~~~~~v~~G 299 (301)
T 1ltq_A 287 RRIGVECWQVASG 299 (301)
T ss_dssp HHTTCCEEECSCC
T ss_pred HHcCCeEEEecCC
Confidence 9999999999987
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=99.38 E-value=5.5e-13 Score=125.33 Aligned_cols=51 Identities=18% Similarity=0.293 Sum_probs=39.8
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcc--ccchh
Q 017455 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE--RISKI 232 (371)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~--~~f~~ 232 (371)
..++.||+.++|+.|+++|++++|+||........+...++.+|+. .+|+.
T Consensus 99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~v 151 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHI 151 (258)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTE
T ss_pred CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceE
Confidence 4668999999999999999999999994321134566778888987 55554
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.33 E-value=4.5e-13 Score=125.05 Aligned_cols=37 Identities=14% Similarity=0.075 Sum_probs=34.2
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
++.+++++|+++++|++|||+.||++|++.+|+.+++
T Consensus 202 l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam 238 (279)
T 4dw8_A 202 LSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAM 238 (279)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred HHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEc
Confidence 8999999999999999999999999999999965444
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.32 E-value=2e-12 Score=121.36 Aligned_cols=37 Identities=11% Similarity=0.054 Sum_probs=34.8
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
++.+++++|+++++|++|||+.||++|++.+|+.+++
T Consensus 207 l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam 243 (290)
T 3dnp_A 207 LALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAM 243 (290)
T ss_dssp HHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred HHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEe
Confidence 8999999999999999999999999999999986555
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.29 E-value=8.2e-13 Score=122.20 Aligned_cols=38 Identities=8% Similarity=0.114 Sum_probs=35.5
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 305 ~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
+++.+++++|+++++|++|||+.||++|++.+|+.+++
T Consensus 187 ~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam 224 (258)
T 2pq0_A 187 GIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAM 224 (258)
T ss_dssp HHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEE
T ss_pred HHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEe
Confidence 48999999999999999999999999999999997775
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.27 E-value=1.2e-11 Score=113.19 Aligned_cols=40 Identities=8% Similarity=0.210 Sum_probs=36.4
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEECCC
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 346 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~ 346 (371)
++.+++++|++++++++|||+.+|+.+++.+|+. +.+.++
T Consensus 158 ~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~-v~~~~~ 197 (231)
T 1wr8_A 158 IEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYK-VAVAQA 197 (231)
T ss_dssp HHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEE-EECTTS
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCe-EEecCC
Confidence 8999999999999999999999999999999998 456554
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.22 E-value=3.1e-12 Score=120.41 Aligned_cols=37 Identities=11% Similarity=0.046 Sum_probs=34.5
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
++.+++++|++++++++|||+.||++|++.+|+.+++
T Consensus 216 l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam 252 (283)
T 3dao_A 216 LSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAV 252 (283)
T ss_dssp HHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred HHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEc
Confidence 8999999999999999999999999999999976555
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.20 E-value=9.8e-12 Score=115.95 Aligned_cols=37 Identities=5% Similarity=0.082 Sum_probs=32.2
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
++.+++++|+++++|++|||+.||++|++.+|+.+++
T Consensus 202 l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam 238 (279)
T 3mpo_A 202 LSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAM 238 (279)
T ss_dssp HHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC
T ss_pred HHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeec
Confidence 8999999999999999999999999999999975444
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.19 E-value=1.1e-12 Score=124.83 Aligned_cols=37 Identities=3% Similarity=-0.076 Sum_probs=34.4
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
++.+++++|++++++++|||+.||++|++.+|+.+++
T Consensus 233 l~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam 269 (304)
T 3l7y_A 233 LQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAM 269 (304)
T ss_dssp HHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEEC
T ss_pred HHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEc
Confidence 8999999999999999999999999999999976554
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=1.2e-12 Score=128.40 Aligned_cols=54 Identities=15% Similarity=0.294 Sum_probs=42.5
Q ss_pred CCCcEEEEeCCH-hhHHHHHHcCCcEEEECCCCCCCcc---cccccccchHHHHhhhh
Q 017455 316 PVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCITTLP---VSKTQRLADMLCRILKS 369 (371)
Q Consensus 316 ~p~e~I~IgDs~-~Di~aA~~aGm~~v~v~~~~~~~~~---l~~~~~~~~~l~~~l~~ 369 (371)
++++++||||+. +||.+|+++||++|+|.+|...... ...++.+++++.++++.
T Consensus 289 ~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~pd~vi~~l~el~~~ 346 (352)
T 3kc2_A 289 PFHAVFMVGDNPASDIIGAQNYGWNSCLVKTGVYNEGDDLKECKPTLIVNDVFDAVTK 346 (352)
T ss_dssp TSSEEEEEESCTTTHHHHHHHHTCEEEECSSSSCCTTCCCTTCCCSEECSSHHHHHHH
T ss_pred CcceEEEEecCcHHHHHHHHHcCCEEEEEccCCCCcccccccCCCCEEECCHHHHHHH
Confidence 679999999999 5999999999999999988654433 23456677777776654
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.13 E-value=1.7e-12 Score=120.52 Aligned_cols=37 Identities=0% Similarity=-0.019 Sum_probs=34.7
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
++.+++++|+++++|++|||+.+|+.|++.+|+.+++
T Consensus 192 ~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~ 228 (261)
T 2rbk_A 192 IDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM 228 (261)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEe
Confidence 8999999999999999999999999999999996554
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.07 E-value=6.5e-11 Score=109.57 Aligned_cols=37 Identities=8% Similarity=0.051 Sum_probs=34.4
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
++.+++++|++++++++|||+.||++|++.+|+.+++
T Consensus 205 l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam 241 (274)
T 3fzq_A 205 IKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAM 241 (274)
T ss_dssp HHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEE
T ss_pred HHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEe
Confidence 8999999999999999999999999999999975554
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.00 E-value=2.4e-10 Score=107.66 Aligned_cols=41 Identities=20% Similarity=0.172 Sum_probs=36.9
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEECCC
Q 017455 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 346 (371)
Q Consensus 305 ~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~ 346 (371)
+++.+++++|+++++|++|||+.||+.|++.+|+ .|.+.++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~-~va~~~~ 260 (288)
T 1nrw_A 220 ALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGK-GVAMGNA 260 (288)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSE-EEECTTC
T ss_pred HHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCc-EEEEcCC
Confidence 3899999999999999999999999999999999 5666654
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.97 E-value=7.8e-11 Score=110.08 Aligned_cols=40 Identities=10% Similarity=-0.007 Sum_probs=35.9
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEECCC
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 346 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~ 346 (371)
++.+++++|+++++|++|||+.+|+.+++.+|+.++ +.++
T Consensus 196 ~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va-~~na 235 (271)
T 1rlm_A 196 ISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFA-MGNA 235 (271)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEE-CTTC
T ss_pred HHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEE-eCCc
Confidence 899999999999999999999999999999999644 5543
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.95 E-value=1.7e-10 Score=108.47 Aligned_cols=37 Identities=16% Similarity=0.298 Sum_probs=34.3
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
++.+++++|++++++++|||+.||++|++.+|+.+++
T Consensus 214 l~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm 250 (285)
T 3pgv_A 214 LEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIM 250 (285)
T ss_dssp HHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred HHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEc
Confidence 8999999999999999999999999999999966554
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=98.93 E-value=4.3e-09 Score=98.78 Aligned_cols=51 Identities=12% Similarity=0.237 Sum_probs=42.9
Q ss_pred CCCCCCccHHHHHHHHHHCCCcEEEEcCCCCC-CcHHHHHHHHHcCccccch
Q 017455 181 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKS-GDRIARSVVEKLGSERISK 231 (371)
Q Consensus 181 ~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~-~~~~~~~~l~~lgl~~~f~ 231 (371)
...+++||+.++|+.|+++|++++|+||.... ....+...++.+|+..+++
T Consensus 98 g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~ 149 (260)
T 3pct_A 98 RQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVND 149 (260)
T ss_dssp TCCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCST
T ss_pred CCCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCcccc
Confidence 45679999999999999999999999996532 3468888999999987664
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=98.92 E-value=2.6e-09 Score=100.38 Aligned_cols=50 Identities=14% Similarity=0.189 Sum_probs=42.1
Q ss_pred CCCCCCccHHHHHHHHHHCCCcEEEEcCCCCC-CcHHHHHHHHHcCccccc
Q 017455 181 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKS-GDRIARSVVEKLGSERIS 230 (371)
Q Consensus 181 ~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~-~~~~~~~~l~~lgl~~~f 230 (371)
...+++||+.++|+.|+++|++++|+||.... ....+...++++|+..++
T Consensus 98 ~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~ 148 (262)
T 3ocu_A 98 RQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVE 148 (262)
T ss_dssp TCCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCS
T ss_pred CCCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCccc
Confidence 34679999999999999999999999996532 346888889999998765
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.90 E-value=1.5e-10 Score=104.22 Aligned_cols=98 Identities=13% Similarity=0.115 Sum_probs=80.7
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHH
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~ 262 (371)
+.++||+.+||+.+++. ++++|+|+ +...++..+++.+++..+|+.+ ++.++... +
T Consensus 67 v~~RPgv~efL~~l~~~-~~i~I~Ts---s~~~~a~~vl~~ld~~~~f~~~-l~rd~~~~--------------~----- 122 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQL-FECVLFTA---SLAKYADPVADLLDRWGVFRAR-LFRESCVF--------------H----- 122 (195)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECS---SCHHHHHHHHHHHCCSSCEEEE-ECGGGCEE--------------E-----
T ss_pred EEeCcCHHHHHHHHHcC-CeEEEEcC---CCHHHHHHHHHHhCCcccEEEE-EEccccee--------------c-----
Confidence 45899999999999998 99999999 4589999999999999988874 33333211 0
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 263 ~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
| +. |.++++.+|.++++||+|||+..++.++.++||.++.
T Consensus 123 -----------------------k---~~--------------~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~~ 162 (195)
T 2hhl_A 123 -----------------------R---GN--------------YVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQS 162 (195)
T ss_dssp -----------------------T---TE--------------EECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEECCC
T ss_pred -----------------------C---Cc--------------eeeeHhHhCCChhHEEEEECCHHHhhhCccCccEEee
Confidence 1 12 5667899999999999999999999999999998765
Q ss_pred EC
Q 017455 343 MR 344 (371)
Q Consensus 343 v~ 344 (371)
+.
T Consensus 163 ~~ 164 (195)
T 2hhl_A 163 WF 164 (195)
T ss_dssp CS
T ss_pred ec
Confidence 54
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.87 E-value=1.6e-09 Score=95.26 Aligned_cols=37 Identities=11% Similarity=0.076 Sum_probs=35.2
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
++.+++++|++|++|+||||+.+|+.+++.+|+.+++
T Consensus 88 l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~ 124 (168)
T 3ewi_A 88 VDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVP 124 (168)
T ss_dssp HHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEEC
T ss_pred HHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEe
Confidence 8999999999999999999999999999999999664
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.86 E-value=1.5e-09 Score=100.45 Aligned_cols=37 Identities=14% Similarity=0.160 Sum_probs=34.6
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
++.+++++|++++++++|||+.||++|++.+|+.+++
T Consensus 199 l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam 235 (268)
T 3r4c_A 199 LSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAM 235 (268)
T ss_dssp HHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred HHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEe
Confidence 8999999999999999999999999999999977554
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=98.85 E-value=4.2e-09 Score=96.32 Aligned_cols=40 Identities=10% Similarity=-0.062 Sum_probs=35.6
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEECCC
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 346 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~ 346 (371)
++.+++++|++++++++|||+.||+.+++.+|+. |.+.++
T Consensus 158 l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~-va~~n~ 197 (227)
T 1l6r_A 158 VNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRK-ACPANA 197 (227)
T ss_dssp HHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEE-EECTTS
T ss_pred HHHHHHHhCcCHHHEEEECCcHHhHHHHHHcCce-EEecCc
Confidence 7889999999999999999999999999999996 445543
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=98.81 E-value=8.1e-10 Score=98.17 Aligned_cols=95 Identities=15% Similarity=0.156 Sum_probs=77.8
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHH
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~ 262 (371)
..++||+.+||+.+++. ++++|+|+ +...++..+++.+++..+|..++ +.++....
T Consensus 54 v~~rPg~~efL~~l~~~-~~i~I~T~---~~~~~a~~vl~~ld~~~~f~~~~-~rd~~~~~------------------- 109 (181)
T 2ght_A 54 VLKRPHVDEFLQRMGEL-FECVLFTA---SLAKYADPVADLLDKWGAFRARL-FRESCVFH------------------- 109 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECS---SCHHHHHHHHHHHCTTCCEEEEE-CGGGSEEE-------------------
T ss_pred EEeCCCHHHHHHHHHhC-CCEEEEcC---CCHHHHHHHHHHHCCCCcEEEEE-eccCceec-------------------
Confidence 45899999999999998 99999999 45899999999999998887753 33222110
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 017455 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (371)
Q Consensus 263 ~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v 341 (371)
| +. |.+.++.+|.++++||+|||+..++.++.++||++.
T Consensus 110 -----------------------k---~~--------------~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i~ 148 (181)
T 2ght_A 110 -----------------------R---GN--------------YVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVA 148 (181)
T ss_dssp -----------------------T---TE--------------EECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCCC
T ss_pred -----------------------C---Cc--------------EeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEec
Confidence 0 11 556689999999999999999999999999999953
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.80 E-value=5.4e-09 Score=100.75 Aligned_cols=40 Identities=18% Similarity=0.224 Sum_probs=31.7
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCc
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 226 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl 226 (371)
..+.|++.++|+.|++ |++++++|+ +...++......+++
T Consensus 102 ~~~~~~~~~~l~~l~~-g~~~~i~t~---~~~~~~~~~~~~~~~ 141 (332)
T 1y8a_A 102 AKFVPDAEKAMATLQE-RWTPVVIST---SYTQYLRRTASMIGV 141 (332)
T ss_dssp CCBCTTHHHHHHHHHT-TCEEEEEEE---EEHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHc-CCcEEEEEC---CceEEEcccchhhhh
Confidence 3579999999999999 999999998 334556666666666
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=98.66 E-value=6.9e-08 Score=91.43 Aligned_cols=48 Identities=25% Similarity=0.484 Sum_probs=42.2
Q ss_pred HhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccc
Q 017455 178 LASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (371)
Q Consensus 178 l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~ 228 (371)
+.....+++||+.++++.|+++|++++++|+ +....++.+.+.+|+..
T Consensus 135 v~~~~i~l~~g~~e~i~~l~~~gi~v~ivSg---g~~~~i~~i~~~~g~~~ 182 (297)
T 4fe3_A 135 VADSDVMLKEGYENFFGKLQQHGIPVFIFSA---GIGDVLEEVIRQAGVYH 182 (297)
T ss_dssp HHTSCCCBCBTHHHHHHHHHHTTCCEEEEEE---EEHHHHHHHHHHTTCCC
T ss_pred HHhcCCCCCCcHHHHHHHHHHcCCeEEEEeC---CcHHHHHHHHHHcCCCc
Confidence 3344688999999999999999999999999 56899999999999864
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.60 E-value=2.5e-07 Score=86.04 Aligned_cols=36 Identities=11% Similarity=0.081 Sum_probs=33.7
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v 341 (371)
++.+++++|+++++|++|||+.+|+.|++.+|+.++
T Consensus 195 ~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~ 230 (268)
T 1nf2_A 195 LRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVA 230 (268)
T ss_dssp HHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEE
T ss_pred HHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEE
Confidence 899999999999999999999999999999999543
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.57 E-value=3.6e-08 Score=92.62 Aligned_cols=40 Identities=13% Similarity=0.155 Sum_probs=35.8
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEECCC
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 346 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~ 346 (371)
++.+++++|++++++++|||+.||+.+++.+|+ .|.+.++
T Consensus 203 l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~-~va~~n~ 242 (282)
T 1rkq_A 203 VKSLADVLGIKPEEIMAIGDQENDIAMIEYAGV-GVAVDNA 242 (282)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE-EEECTTS
T ss_pred HHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCc-EEEecCC
Confidence 899999999999999999999999999999998 4555543
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=7.4e-09 Score=95.80 Aligned_cols=38 Identities=11% Similarity=0.019 Sum_probs=34.8
Q ss_pred HHHHHHHcCCCC--CcEEEEeCCHhhHHHHHHcCCcEEEE
Q 017455 306 LRAGAEYAEKPV--RNCFLIAGSQSGVAGAQRIGMPCVVM 343 (371)
Q Consensus 306 ~~~a~~~lgv~p--~e~I~IgDs~~Di~aA~~aGm~~v~v 343 (371)
++.+++++|+++ +++++|||+.||+.|++.+|+.+++-
T Consensus 181 l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~ 220 (259)
T 3zx4_A 181 VARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVG 220 (259)
T ss_dssp HHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECS
T ss_pred HHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeC
Confidence 899999999999 99999999999999999999875543
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.49 E-value=2e-06 Score=85.05 Aligned_cols=41 Identities=17% Similarity=0.151 Sum_probs=37.7
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcc
Q 017455 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~ 227 (371)
+++||++++++.|+++|++++|||+ ++...++.+.+.+|+.
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSg---g~~~~v~~ia~~lg~~ 261 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSA---SFIDIVRAFATDTNNN 261 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHCTTSS
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcC---CcHHHHHHHHHHhCcc
Confidence 3799999999999999999999999 6699999999999874
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.34 E-value=5e-08 Score=92.89 Aligned_cols=40 Identities=3% Similarity=0.033 Sum_probs=35.9
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEECCC
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 346 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~ 346 (371)
++.+++.+|++++++++|||+.||+.+++.+|+. |.+.++
T Consensus 229 l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~na 268 (301)
T 2b30_A 229 INYLLKHYNISNDQVLVVGDAENDIAMLSNFKYS-FAVANA 268 (301)
T ss_dssp HHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEE-EECTTC
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCe-EEEcCC
Confidence 8999999999999999999999999999999995 455544
|
| >2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=1.7e-06 Score=88.48 Aligned_cols=125 Identities=10% Similarity=0.101 Sum_probs=81.7
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHc-C-------------ccccchheeecchhHHhhhhc--
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL-G-------------SERISKIKIVGNEEVERSLYG-- 246 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~l-g-------------l~~~f~~~i~~~~~~~~~~f~-- 246 (371)
+..-|++..+|..||+.| ++.++|| |....+..+++.+ | |.++|+++|+.+.-= .+|+
T Consensus 245 v~kdp~l~~~L~~Lr~~G-KlfLiTN---S~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A~KP--~FF~~~ 318 (555)
T 2jc9_A 245 VVKDGKLPLLLSRMKEVG-KVFLATN---SDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKP--LFFGEG 318 (555)
T ss_dssp BCCCTHHHHHHHHHHHHS-EEEEECS---SCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESCCTT--GGGTTC
T ss_pred cCCChHHHHHHHHHHHcC-CEEEEeC---CChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeCCCC--CcccCC
Confidence 445789999999999999 9999999 5588888988877 6 568899877654211 1122
Q ss_pred ----cccccccccC-CchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 017455 247 ----QFVLGKGISS-GVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (371)
Q Consensus 247 ----~~v~g~~v~~-~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I 321 (371)
.+.+..+... +.. .+..+ ...+|. .-. +..+++.+|+.+++++
T Consensus 319 ~pfr~Vd~~tg~l~~~~~----------------------~~~l~-~g~vY~-gGn--------~~~~~~llg~~g~eVL 366 (555)
T 2jc9_A 319 TVLRQVDTKTGKLKIGTY----------------------TGPLQ-HGIVYS-GGS--------SDTICDLLGAKGKDIL 366 (555)
T ss_dssp CCEEEEETTTTEECSSCC----------------------CSCCC-TTCCEE-ECC--------HHHHHHHHTCCGGGEE
T ss_pred CcceEeecCCCccccccc----------------------ccccc-CCceec-cCC--------HHHHHHHhCCCCCeEE
Confidence 0000000000 000 00000 001100 000 4888999999999999
Q ss_pred EEeCCH-hhHHHHH-HcCCcEEEECC
Q 017455 322 LIAGSQ-SGVAGAQ-RIGMPCVVMRS 345 (371)
Q Consensus 322 ~IgDs~-~Di~aA~-~aGm~~v~v~~ 345 (371)
||||+. .||..++ .+|+.|++|-.
T Consensus 367 YVGDhIftDIl~~kk~~GWrTiLViP 392 (555)
T 2jc9_A 367 YIGDHIFGDILKSKKRQGWRTFLVIP 392 (555)
T ss_dssp EEESCCCCCCHHHHHHHCCEEEEECT
T ss_pred EECCEehHhHHhHHhhcCeEEEEEEe
Confidence 999997 5999997 99999999963
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.19 E-value=3.8e-06 Score=88.32 Aligned_cols=87 Identities=10% Similarity=0.116 Sum_probs=67.5
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHHH
Q 017455 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 263 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~ 263 (371)
+++|++.+.|+.|+++|++++++|+ .....+..+.+.+|++.+|...
T Consensus 457 ~l~~~~~~~i~~L~~~Gi~v~~~TG---d~~~~a~~ia~~lgi~~~~~~~------------------------------ 503 (645)
T 3j08_A 457 TLKESAKPAVQELKRMGIKVGMITG---DNWRSAEAISRELNLDLVIAEV------------------------------ 503 (645)
T ss_dssp CCTTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHTCSEEECSC------------------------------
T ss_pred CchhHHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHHHcCCCEEEEeC------------------------------
Confidence 5899999999999999999999999 5588899999999998765331
Q ss_pred HHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 264 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 264 ~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
.|..+ ..+++.+... ++++||||+.||+.|.+.||+...+
T Consensus 504 -----------------------------~P~~K---------~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiam 543 (645)
T 3j08_A 504 -----------------------------LPHQK---------SEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAV 543 (645)
T ss_dssp -----------------------------CTTCH---------HHHHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEE
T ss_pred -----------------------------CHHhH---------HHHHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEe
Confidence 01111 2234444444 8999999999999999999965443
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.02 E-value=1.6e-05 Score=84.67 Aligned_cols=44 Identities=18% Similarity=0.244 Sum_probs=39.8
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccc
Q 017455 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f 230 (371)
+++|++.+.|+.|+++|++++++|+ .....+..+.+.+|++..+
T Consensus 535 ~~~~~~~~~i~~l~~~Gi~v~~~TG---d~~~~a~~ia~~lgi~~~~ 578 (723)
T 3j09_A 535 TLKESAKPAVQELKRMGIKVGMITG---DNWRSAEAISRELNLDLVI 578 (723)
T ss_dssp CSCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHTCSEEE
T ss_pred CcchhHHHHHHHHHHCCCEEEEECC---CCHHHHHHHHHHcCCcEEE
Confidence 5899999999999999999999999 5578899999999998654
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=0.00016 Score=69.88 Aligned_cols=38 Identities=18% Similarity=0.372 Sum_probs=34.5
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHc
Q 017455 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL 224 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~l 224 (371)
.++|++.+|++.|+++|+.++|||+ ++.+.++.+.+.+
T Consensus 143 ~~~~~~~~l~~~l~~~G~~v~ivSa---s~~~~v~~~a~~~ 180 (327)
T 4as2_A 143 RVFSGQRELYNKLMENGIEVYVISA---AHEELVRMVAADP 180 (327)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHTCG
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeC---CcHHHHHHHHhhc
Confidence 5899999999999999999999999 5689999888864
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00015 Score=79.78 Aligned_cols=44 Identities=20% Similarity=0.289 Sum_probs=39.2
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcccc
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~ 229 (371)
-+++|++.+.|+.|+++|++++++|+ .....+..+.+.+|+...
T Consensus 602 D~lr~~~~~~I~~l~~~Gi~v~miTG---D~~~ta~~ia~~lgi~~~ 645 (995)
T 3ar4_A 602 DPPRKEVMGSIQLCRDAGIRVIMITG---DNKGTAIAICRRIGIFGE 645 (995)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEES---SCHHHHHHHHHHHTSSCT
T ss_pred CCCchhHHHHHHHHHHcCCEEEEECC---CCHHHHHHHHHHcCcCCC
Confidence 36899999999999999999999999 557888999999999653
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=97.53 E-value=5.8e-05 Score=80.47 Aligned_cols=44 Identities=23% Similarity=0.496 Sum_probs=39.7
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccc
Q 017455 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f 230 (371)
+++|++.+.|+.|+++|++++++|+ .....+..+.+.+|+++++
T Consensus 554 ~i~~~~~~aI~~L~~~Gi~v~mlTG---d~~~~a~~ia~~lgi~~v~ 597 (736)
T 3rfu_A 554 PIKSSTPETILELQQSGIEIVMLTG---DSKRTAEAVAGTLGIKKVV 597 (736)
T ss_dssp CBCSSHHHHHHHHHHHTCEEEEECS---SCHHHHHHHHHHHTCCCEE
T ss_pred cchhhHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCCEEE
Confidence 5889999999999999999999999 5578899999999998754
|
| >3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} | Back alignment and structure |
|---|
Probab=97.34 E-value=2.7e-05 Score=70.33 Aligned_cols=96 Identities=13% Similarity=0.157 Sum_probs=70.8
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcc-ccchheeecchhHHhhhhccccccccccCCchhHH
Q 017455 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE-RISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~-~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~ 262 (371)
..+||+.+||+.+. +++.++|.|++ ...++..+++.++.. .+|...+.. +... . ..|.
T Consensus 59 ~~RPgl~eFL~~l~-~~yeivI~Tas---~~~ya~~vl~~LDp~~~~f~~rl~R-~~c~-------~-----~~g~---- 117 (204)
T 3qle_A 59 AKRPGADYFLGYLS-QYYEIVLFSSN---YMMYSDKIAEKLDPIHAFVSYNLFK-EHCV-------Y-----KDGV---- 117 (204)
T ss_dssp EECTTHHHHHHHHT-TTEEEEEECSS---CHHHHHHHHHHTSTTCSSEEEEECG-GGSE-------E-----ETTE----
T ss_pred EeCCCHHHHHHHHH-hCCEEEEEcCC---cHHHHHHHHHHhCCCCCeEEEEEEe-ccee-------E-----ECCe----
Confidence 48999999999998 67999999994 489999999999987 477654321 1110 0 0110
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 263 ~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
|.+.++.+|.++++||+|+|+...+......|+.+.-
T Consensus 118 -------------------------------------------y~KdL~~Lgrdl~~vIiIDDsp~~~~~~p~N~I~I~~ 154 (204)
T 3qle_A 118 -------------------------------------------HIKDLSKLNRDLSKVIIIDTDPNSYKLQPENAIPMEP 154 (204)
T ss_dssp -------------------------------------------EECCGGGSCSCGGGEEEEESCTTTTTTCGGGEEECCC
T ss_pred -------------------------------------------eeecHHHhCCChHHEEEEECCHHHHhhCccCceEeee
Confidence 3444788899999999999999888666666665544
Q ss_pred E
Q 017455 343 M 343 (371)
Q Consensus 343 v 343 (371)
.
T Consensus 155 ~ 155 (204)
T 3qle_A 155 W 155 (204)
T ss_dssp C
T ss_pred E
Confidence 3
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00074 Score=73.60 Aligned_cols=42 Identities=29% Similarity=0.330 Sum_probs=38.3
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccc
Q 017455 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~ 228 (371)
+++|++.+.|+.|+++|+++.++|+ .....+..+.+.+|+..
T Consensus 535 p~R~ea~~aI~~l~~aGI~v~MiTG---D~~~TA~aIA~~lGI~~ 576 (920)
T 1mhs_A 535 PPRHDTYKTVCEAKTLGLSIKMLTG---DAVGIARETSRQLGLGT 576 (920)
T ss_dssp CCCHHHHHHHHHHHHHTCEEEEEES---SCHHHHHHHHHHHTSSC
T ss_pred cccccHHHHHHHHhhcCceEEEEcC---CCHHHHHHHHHHcCCCc
Confidence 6899999999999999999999999 55788899999999963
|
| >4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0011 Score=66.78 Aligned_cols=121 Identities=9% Similarity=0.030 Sum_probs=79.5
Q ss_pred CCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHH-c--------CccccchheeecchhHHhhhhcc------cc
Q 017455 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-L--------GSERISKIKIVGNEEVERSLYGQ------FV 249 (371)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~-l--------gl~~~f~~~i~~~~~~~~~~f~~------~v 249 (371)
.-|.+..+|..|+++|-++-++|| |+-.++..++.. + .|.++||++|+.+.-= .+|.. +.
T Consensus 187 k~~~l~~~L~~lr~~GKklFLiTN---S~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~KP--~FF~~~~~~~~v~ 261 (470)
T 4g63_A 187 REKEVVEGLKHFIRYGKKIFILTN---SEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKP--RFFYDNLRFLSVN 261 (470)
T ss_dssp CCHHHHHHHHHHHTTTCEEEEECS---SCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCCTT--HHHHSCCCEEEEC
T ss_pred CCHhHHHHHHHHHHcCCeEEEeeC---CCchHHHHHHHhhcccCCCCCCChhhhcCEEEECCCCC--CcccCCCcceEEE
Confidence 468999999999999999999999 457777777764 3 4779999988875311 12311 11
Q ss_pred ccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCc-cccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCH-
Q 017455 250 LGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLS-VDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ- 327 (371)
Q Consensus 250 ~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~-p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~- 327 (371)
+..+..... .+|. +.+|. ... .....+.+|..-.++++|||+.
T Consensus 262 ~~~g~l~~~--------------------------~~~~~~~vY~-gGn--------~~~l~~llg~~g~~VLY~GDhi~ 306 (470)
T 4g63_A 262 PENGTMTNV--------------------------HGPIVPGVYQ-GGN--------AKKFTEDLGVGGDEILYIGDHIY 306 (470)
T ss_dssp TTTCCEEEC--------------------------CSSCCSEEEE-ECC--------HHHHHHHTTCCGGGEEEEESCCC
T ss_pred CCCCccccc--------------------------ccccCCceee-cCc--------HHHHHHHhCCCCCeEEEECCchH
Confidence 111110000 0010 11211 011 5667788899999999999997
Q ss_pred hhHHHHHH-cCCcEEEECC
Q 017455 328 SGVAGAQR-IGMPCVVMRS 345 (371)
Q Consensus 328 ~Di~aA~~-aGm~~v~v~~ 345 (371)
.||..++. .|+.|++|-.
T Consensus 307 ~Di~~~kk~~gWrT~~Ii~ 325 (470)
T 4g63_A 307 GDILRLKKDCNWRTALVVE 325 (470)
T ss_dssp SCHHHHHHSCCCEEEEECT
T ss_pred HHHHhhhhccCCeEEEEhH
Confidence 59877765 6999999863
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=97.07 E-value=0.00074 Score=57.37 Aligned_cols=43 Identities=16% Similarity=-0.069 Sum_probs=29.7
Q ss_pred CCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcc
Q 017455 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (371)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~ 227 (371)
+.|++.+.|+.|+++|++++|+|+.+......+...++.+|+.
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 3468888999999999999999994310123344455666664
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0021 Score=70.91 Aligned_cols=41 Identities=27% Similarity=0.413 Sum_probs=37.4
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcc
Q 017455 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~ 227 (371)
+++|++.+.|+.|+++|++++++|+ .....+..+.+.+|+.
T Consensus 599 plr~~~~~aI~~l~~aGI~v~miTG---D~~~tA~~ia~~lgi~ 639 (1028)
T 2zxe_A 599 PPRAAVPDAVGKCRSAGIKVIMVTG---DHPITAKAIAKGVGII 639 (1028)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHTSS
T ss_pred CCChhHHHHHHHHHHcCCEEEEECC---CCHHHHHHHHHHcCCC
Confidence 5899999999999999999999999 5578888999999986
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=96.73 E-value=0.003 Score=58.55 Aligned_cols=42 Identities=5% Similarity=-0.042 Sum_probs=37.3
Q ss_pred HHHHHHHHcC-CCCCc--EEEEeCCHhhHHHHHHcCCcEEEECCCC
Q 017455 305 ALRAGAEYAE-KPVRN--CFLIAGSQSGVAGAQRIGMPCVVMRSRC 347 (371)
Q Consensus 305 ~~~~a~~~lg-v~p~e--~I~IgDs~~Di~aA~~aGm~~v~v~~~~ 347 (371)
+++.+++++| +++++ +++|||+.||+.+++.+|+. |.+.++.
T Consensus 193 ~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~n~~ 237 (275)
T 1xvi_A 193 AANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYA-VIVKGLN 237 (275)
T ss_dssp HHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEE-EECCCCC
T ss_pred HHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCce-EEecCCC
Confidence 3888999999 99999 99999999999999999995 7776654
|
| >3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.00062 Score=66.83 Aligned_cols=51 Identities=18% Similarity=0.293 Sum_probs=43.4
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccc-cchheeecc
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGN 237 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~-~f~~~i~~~ 237 (371)
+.++||+.+||+.+. +++.++|.|++ ...++..+++.+++.. +|...+++.
T Consensus 74 v~~RPg~~eFL~~l~-~~yeivI~Tas---~~~yA~~vl~~LDp~~~~f~~ri~sr 125 (372)
T 3ef0_A 74 IKFRPGLAQFLQKIS-ELYELHIYTMG---TKAYAKEVAKIIDPTGKLFQDRVLSR 125 (372)
T ss_dssp EEECTTHHHHHHHHH-TTEEEEEECSS---CHHHHHHHHHHHCTTSCSSSSCEECT
T ss_pred EEECcCHHHHHHHHh-cCcEEEEEeCC---cHHHHHHHHHHhccCCceeeeEEEEe
Confidence 568999999999998 67999999994 4899999999999986 777555544
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=96.62 E-value=0.007 Score=66.82 Aligned_cols=42 Identities=26% Similarity=0.351 Sum_probs=37.6
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcc
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~ 227 (371)
-+++|++.+.|+.|+++|++++++|+ .....+..+.+.+|+.
T Consensus 603 Dp~r~~~~~aI~~l~~aGI~vvmiTG---d~~~tA~~ia~~lgi~ 644 (1034)
T 3ixz_A 603 DPPRATVPDAVLKCRTAGIRVIMVTG---DHPITAKAIAASVGII 644 (1034)
T ss_pred CCCchhHHHHHHHHHHcCCeEEEEeC---CCHHHHHHHHHHcCCC
Confidence 46899999999999999999999999 4577888899999985
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0016 Score=59.42 Aligned_cols=41 Identities=7% Similarity=0.081 Sum_probs=35.9
Q ss_pred HHHHHHHHcCC-CCCcEEEEeCCHhhHHHHHHcCCcEEEECCC
Q 017455 305 ALRAGAEYAEK-PVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 346 (371)
Q Consensus 305 ~~~~a~~~lgv-~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~ 346 (371)
|++.+++++|+ +++++++|||+.||++|.+.+|+. |.+.++
T Consensus 183 al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~-va~gna 224 (249)
T 2zos_A 183 AAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKV-FIVGSL 224 (249)
T ss_dssp HHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEE-EEESSC
T ss_pred HHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcE-EEeCCC
Confidence 38899999998 999999999999999999999996 555544
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0027 Score=68.94 Aligned_cols=41 Identities=22% Similarity=0.333 Sum_probs=37.4
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcc
Q 017455 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~ 227 (371)
+++|++.+.|+.|+++|+++.++|+ .....+..+.+.+|+.
T Consensus 488 p~R~~a~~aI~~l~~aGI~v~MiTG---D~~~tA~~iA~~lGi~ 528 (885)
T 3b8c_A 488 PPRHDSAETIRRALNLGVNVKMITG---DQLAIGKETGRRLGMG 528 (885)
T ss_dssp CCCHHHHHHHHHHHHTTCCCEEEES---SCHHHHTHHHHTTTCT
T ss_pred ccchhHHHHHHHHHHcCCcEEEEcC---CChHHHHHHHHHhCCc
Confidence 6899999999999999999999999 5578888899999995
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=96.36 E-value=0.0017 Score=59.11 Aligned_cols=40 Identities=8% Similarity=0.006 Sum_probs=35.4
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEECCC
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 346 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~ 346 (371)
++.+++++|++++++++|||+.||+.+++.+|+. |.+.++
T Consensus 167 l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~-va~~na 206 (244)
T 1s2o_A 167 TQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARG-VIVRNA 206 (244)
T ss_dssp HHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEE-EECTTC
T ss_pred HHHHHHHhCCCHHHEEEECCchhhHHHHhccCcE-EEEcCC
Confidence 8999999999999999999999999999999985 555443
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=95.93 E-value=0.0036 Score=57.99 Aligned_cols=18 Identities=33% Similarity=0.591 Sum_probs=15.8
Q ss_pred CCceEEEEecCCcccccc
Q 017455 82 PRDLAVLLEVDGVLVDAY 99 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~ 99 (371)
|.+|+|+||+||||++..
T Consensus 7 m~~~li~~DlDGTLl~~~ 24 (275)
T 1xvi_A 7 QQPLLVFSDLDGTLLDSH 24 (275)
T ss_dssp CCCEEEEEECTTTTSCSS
T ss_pred cCceEEEEeCCCCCCCCC
Confidence 678999999999999853
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=95.52 E-value=0.017 Score=52.60 Aligned_cols=34 Identities=12% Similarity=0.163 Sum_probs=24.1
Q ss_pred HHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccc
Q 017455 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (371)
Q Consensus 192 lL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~ 228 (371)
.|++|+++|++++++|+. +...+..+++.+|+..
T Consensus 25 ~l~~l~~~g~~~~i~Tgr---~~~~~~~~~~~~~~~~ 58 (249)
T 2zos_A 25 IIEELKDMGFEIIFNSSK---TRAEQEYYRKELEVET 58 (249)
T ss_dssp HHHHHHHTTEEEEEBCSS---CHHHHHHHHHHHTCCS
T ss_pred HHHHHHHCCCEEEEEeCC---CHHHHHHHHHHcCCCc
Confidence 455677888888888884 3556667777777653
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=95.23 E-value=0.033 Score=44.59 Aligned_cols=35 Identities=23% Similarity=0.254 Sum_probs=24.1
Q ss_pred HHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccc
Q 017455 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (371)
Q Consensus 192 lL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f 230 (371)
=+..+++.|++.+.++.. ......+.+.+|+..+|
T Consensus 103 di~~a~~~G~~~i~~~~~----~~~~~~l~~~~~~~~~f 137 (137)
T 2pr7_A 103 NVRGAVEAGLVGVYYQQF----DRAVVEIVGLFGLEGEF 137 (137)
T ss_dssp HHHHHHHHTCEEEECSCH----HHHHHHHHHHHTCCSCC
T ss_pred HHHHHHHCCCEEEEeCCh----HHHHHHHHHHhCCccCC
Confidence 477888889977766652 44555677788887654
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=95.02 E-value=0.053 Score=49.80 Aligned_cols=50 Identities=22% Similarity=0.216 Sum_probs=38.6
Q ss_pred CCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcc-ccchhee
Q 017455 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE-RISKIKI 234 (371)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~-~~f~~~i 234 (371)
+.|++.+.|+.++++|++++++||.+..........++.+|+. ..++.++
T Consensus 31 ~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~~~~~~~ii 81 (284)
T 2hx1_A 31 LLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLFSITADKII 81 (284)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCTTCCGGGEE
T ss_pred eChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcCCCCHhhEE
Confidence 4578889999999999999999984433456677778889987 6665543
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=94.74 E-value=0.016 Score=52.34 Aligned_cols=33 Identities=0% Similarity=-0.072 Sum_probs=28.0
Q ss_pred cCCCCCcEEEEeC----CHhhHHHHHHcCCcEEEECC
Q 017455 313 AEKPVRNCFLIAG----SQSGVAGAQRIGMPCVVMRS 345 (371)
Q Consensus 313 lgv~p~e~I~IgD----s~~Di~aA~~aGm~~v~v~~ 345 (371)
+|++++++++||| +.||++|.+.+|...+.+.+
T Consensus 197 ~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~N 233 (246)
T 2amy_A 197 ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA 233 (246)
T ss_dssp TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSS
T ss_pred hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeC
Confidence 8999999999999 99999999999987777764
|
| >3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=94.70 E-value=0.013 Score=58.68 Aligned_cols=51 Identities=18% Similarity=0.293 Sum_probs=43.4
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccc-cchheeecc
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGN 237 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~-~f~~~i~~~ 237 (371)
+..+||+.+||+.+. +.+.++|.|.+ ...++..+++.++... +|...+++.
T Consensus 82 V~~RPgl~eFL~~ls-~~yEivIfTas---~~~YA~~Vl~~LDp~~~~f~~Rl~sR 133 (442)
T 3ef1_A 82 IKFRPGLAQFLQKIS-ELYELHIYTMG---TKAYAKEVAKIIDPTGKLFQDRVLSR 133 (442)
T ss_dssp EEECTTHHHHHHHHT-TTEEEEEECSS---CHHHHHHHHHHHCTTSTTTTTCEECT
T ss_pred EEeCCCHHHHHHHHh-CCcEEEEEcCC---CHHHHHHHHHHhccCCccccceEEEe
Confidence 568999999999998 57999999994 4899999999999986 777655543
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=94.48 E-value=0.019 Score=52.45 Aligned_cols=30 Identities=3% Similarity=-0.145 Sum_probs=26.7
Q ss_pred CCCcEEEEeCC----HhhHHHHHHcCCcEEEECC
Q 017455 316 PVRNCFLIAGS----QSGVAGAQRIGMPCVVMRS 345 (371)
Q Consensus 316 ~p~e~I~IgDs----~~Di~aA~~aGm~~v~v~~ 345 (371)
+++++++|||+ .||++|.+.+|...+.|.+
T Consensus 198 ~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n 231 (246)
T 3f9r_A 198 DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTS 231 (246)
T ss_dssp TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSS
T ss_pred CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCC
Confidence 89999999995 9999999999987777764
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=94.45 E-value=0.02 Score=46.93 Aligned_cols=17 Identities=24% Similarity=0.440 Sum_probs=14.7
Q ss_pred ceEEEEecCCccccccc
Q 017455 84 DLAVLLEVDGVLVDAYR 100 (371)
Q Consensus 84 ~kaviFD~DGTL~d~~~ 100 (371)
+|+|+||+||||++...
T Consensus 1 ik~i~~DlDGTL~~~~~ 17 (126)
T 1xpj_A 1 MKKLIVDLDGTLTQANT 17 (126)
T ss_dssp CCEEEECSTTTTBCCCC
T ss_pred CCEEEEecCCCCCCCCC
Confidence 47999999999998754
|
| >3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=93.62 E-value=0.01 Score=56.98 Aligned_cols=41 Identities=22% Similarity=0.410 Sum_probs=36.6
Q ss_pred CCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcccc
Q 017455 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229 (371)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~ 229 (371)
.|||+.+||+.+.+ .+.++|.|.+ ...++..+++.+++...
T Consensus 165 ~RP~l~eFL~~l~~-~yeivIfTas---~~~ya~~vld~Ld~~~~ 205 (320)
T 3shq_A 165 MRPYLHEFLTSAYE-DYDIVIWSAT---SMRWIEEKMRLLGVASN 205 (320)
T ss_dssp BCTTHHHHHHHHHH-HEEEEEECSS---CHHHHHHHHHHTTCTTC
T ss_pred eCCCHHHHHHHHHh-CCEEEEEcCC---cHHHHHHHHHHhCCCCC
Confidence 79999999999995 5999999994 48999999999998654
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=93.39 E-value=0.29 Score=47.25 Aligned_cols=48 Identities=23% Similarity=0.183 Sum_probs=35.0
Q ss_pred CCccHHHHHHHHHHCCCcEEEEcCCCC-CCcHHHHHHHHHcCccccchh
Q 017455 185 LRPGVEDFVDDAYNEGIPLIVLTAYGK-SGDRIARSVVEKLGSERISKI 232 (371)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~IvTn~~~-~~~~~~~~~l~~lgl~~~f~~ 232 (371)
+.||+.++|+.|+++|++++++||.+. +....+..+.+.+|+.-..+.
T Consensus 30 ~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~~~ 78 (352)
T 3kc2_A 30 PIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPLQ 78 (352)
T ss_dssp ECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCGGG
T ss_pred eCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCChhh
Confidence 678999999999999999999999652 233444444447888644343
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=92.22 E-value=0.11 Score=47.32 Aligned_cols=37 Identities=5% Similarity=-0.090 Sum_probs=32.0
Q ss_pred HHHHHHHcCCCCCcEEEEeC----CHhhHHHHHHcCCcEEEECC
Q 017455 306 LRAGAEYAEKPVRNCFLIAG----SQSGVAGAQRIGMPCVVMRS 345 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgD----s~~Di~aA~~aGm~~v~v~~ 345 (371)
++.. +|++++++++||| +.||++|.+.+|+..+.+.+
T Consensus 202 l~~l---~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~N 242 (262)
T 2fue_A 202 LDSL---DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVS 242 (262)
T ss_dssp HHHH---TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSS
T ss_pred HHHH---HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecC
Confidence 4555 8999999999999 99999999999987777743
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=92.14 E-value=0.074 Score=48.57 Aligned_cols=31 Identities=29% Similarity=0.350 Sum_probs=21.3
Q ss_pred CceEEEEecCCccccccccCcHHHHHHHHHHc
Q 017455 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKL 114 (371)
Q Consensus 83 ~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~ 114 (371)
++|+|+||+||||++.... ..+...++++++
T Consensus 12 ~~kli~~DlDGTLl~~~~~-is~~~~~al~~l 42 (262)
T 2fue_A 12 ERVLCLFDVDGTLTPARQK-IDPEVAAFLQKL 42 (262)
T ss_dssp -CEEEEEESBTTTBSTTSC-CCHHHHHHHHHH
T ss_pred CeEEEEEeCccCCCCCCCc-CCHHHHHHHHHH
Confidence 5799999999999987653 334444555443
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=91.82 E-value=0.17 Score=45.59 Aligned_cols=35 Identities=11% Similarity=0.063 Sum_probs=30.2
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHc--CCcEEEEC
Q 017455 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI--GMPCVVMR 344 (371)
Q Consensus 305 ~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~a--Gm~~v~v~ 344 (371)
|++..++++| +++|||+.||+.|.+.+ |..+++=+
T Consensus 164 al~~l~~~~g-----via~GD~~ND~~Ml~~a~~g~~vam~N 200 (239)
T 1u02_A 164 AIRSVRGERP-----AIIAGDDATDEAAFEANDDALTIKVGE 200 (239)
T ss_dssp HHHHHHTTSC-----EEEEESSHHHHHHHHTTTTSEEEEESS
T ss_pred HHHHHHhhCC-----eEEEeCCCccHHHHHHhhCCcEEEECC
Confidence 4888899998 99999999999999999 87665543
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=90.90 E-value=0.73 Score=41.57 Aligned_cols=47 Identities=28% Similarity=0.438 Sum_probs=32.8
Q ss_pred CccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchh
Q 017455 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI 232 (371)
Q Consensus 186 ~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~ 232 (371)
.|++.++|+.++++|++++++||.+..........+..+|+....+.
T Consensus 19 ~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~ 65 (263)
T 1zjj_A 19 IPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSI 65 (263)
T ss_dssp CTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGG
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhh
Confidence 47889999999999999999999653222333344556787644444
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=89.67 E-value=2.1 Score=38.36 Aligned_cols=49 Identities=16% Similarity=0.293 Sum_probs=37.7
Q ss_pred ccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheee
Q 017455 187 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIV 235 (371)
Q Consensus 187 pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~ 235 (371)
|++.++|++++++|++++++||.+......+...++.+|+....+.++.
T Consensus 24 ~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~~~ii~ 72 (264)
T 3epr_A 24 PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYT 72 (264)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCCGGGEEE
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhheec
Confidence 7888999999999999999998654445666777888888755444433
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=89.38 E-value=0.15 Score=43.82 Aligned_cols=31 Identities=13% Similarity=0.204 Sum_probs=24.6
Q ss_pred HHHHHHHCCCcEEEEcCCCCCCcHHHHHHHH--HcCcc
Q 017455 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVE--KLGSE 227 (371)
Q Consensus 192 lL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~--~lgl~ 227 (371)
.|+.|+++|++++|+||. ..+..+++ .+|+.
T Consensus 44 ~L~~Lk~~Gi~~~I~Tg~-----~~~~~~l~~l~lgi~ 76 (168)
T 3ewi_A 44 GISLLKKSGIEVRLISER-----ACSKQTLSALKLDCK 76 (168)
T ss_dssp HHHHHHHTTCEEEEECSS-----CCCHHHHHTTCCCCC
T ss_pred HHHHHHHCCCEEEEEeCc-----HHHHHHHHHhCCCcE
Confidence 578999999999999993 45667788 66765
|
| >2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824} | Back alignment and structure |
|---|
Probab=89.05 E-value=1.5 Score=38.54 Aligned_cols=36 Identities=11% Similarity=0.106 Sum_probs=28.4
Q ss_pred HHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEECCCCC
Q 017455 308 AGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSRCI 348 (371)
Q Consensus 308 ~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~~~ 348 (371)
.-++.-|++ ++|||+.. ...|++.||+++++.++..
T Consensus 136 ~~l~~~G~~----vvVG~~~~-~~~A~~~Gl~~vli~sg~e 171 (196)
T 2q5c_A 136 SKVKTENIK----IVVSGKTV-TDEAIKQGLYGETINSGEE 171 (196)
T ss_dssp HHHHHTTCC----EEEECHHH-HHHHHHTTCEEEECCCCHH
T ss_pred HHHHHCCCe----EEECCHHH-HHHHHHcCCcEEEEecCHH
Confidence 335566777 79998875 7789999999999987643
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=88.62 E-value=0.099 Score=47.05 Aligned_cols=32 Identities=25% Similarity=0.341 Sum_probs=22.4
Q ss_pred CCCceEEEEecCCccccccccCcHHHHHHHHHH
Q 017455 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQK 113 (371)
Q Consensus 81 ~~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~ 113 (371)
.|++|+|+||+||||++.... ..+...+++++
T Consensus 3 ~~~~kli~~DlDGTLl~~~~~-i~~~~~~al~~ 34 (246)
T 2amy_A 3 APGPALCLFDVDGTLTAPRQK-ITKEMDDFLQK 34 (246)
T ss_dssp -CCSEEEEEESBTTTBCTTSC-CCHHHHHHHHH
T ss_pred CCCceEEEEECCCCcCCCCcc-cCHHHHHHHHH
Confidence 567899999999999987643 33444555544
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=88.07 E-value=0.23 Score=44.60 Aligned_cols=15 Identities=33% Similarity=0.481 Sum_probs=12.7
Q ss_pred ceEEEEecCCccccc
Q 017455 84 DLAVLLEVDGVLVDA 98 (371)
Q Consensus 84 ~kaviFD~DGTL~d~ 98 (371)
+|+|+||+||||++.
T Consensus 1 ikli~~DlDGTLl~~ 15 (239)
T 1u02_A 1 MSLIFLDYDGTLVPI 15 (239)
T ss_dssp -CEEEEECBTTTBCC
T ss_pred CeEEEEecCCCCcCC
Confidence 478999999999973
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=87.93 E-value=0.75 Score=41.30 Aligned_cols=48 Identities=10% Similarity=0.180 Sum_probs=36.0
Q ss_pred ccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchhee
Q 017455 187 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKI 234 (371)
Q Consensus 187 pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i 234 (371)
|++.++|++++++|++++++||.+......+...+..+|+....+.++
T Consensus 25 ~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~~~~ii 72 (266)
T 3pdw_A 25 EEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPATEEQVF 72 (266)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCCGGGEE
T ss_pred ccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHHHcc
Confidence 467788999999999999999955344566677788889865444433
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=85.15 E-value=0.47 Score=42.64 Aligned_cols=27 Identities=11% Similarity=0.171 Sum_probs=18.2
Q ss_pred eEEEEecCCccccccccCcHHHHHHHHHH
Q 017455 85 LAVLLEVDGVLVDAYRFGNRQAFNVAFQK 113 (371)
Q Consensus 85 kaviFD~DGTL~d~~~~~~~~a~~~~~~~ 113 (371)
.+|+||+||||++.... .....+++++
T Consensus 4 ~li~~DlDGTLl~~~~~--~~~~~~~l~~ 30 (244)
T 1s2o_A 4 LLLISDLDNTWVGDQQA--LEHLQEYLGD 30 (244)
T ss_dssp EEEEECTBTTTBSCHHH--HHHHHHHHHT
T ss_pred eEEEEeCCCCCcCCHHH--HHHHHHHHHH
Confidence 49999999999986532 2444444443
|
| >3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A | Back alignment and structure |
|---|
Probab=84.04 E-value=5.3 Score=36.75 Aligned_cols=39 Identities=13% Similarity=0.092 Sum_probs=35.0
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEECC
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~ 345 (371)
|+.+.+++| +...-++|||+.--=+||+..+|+++-+..
T Consensus 220 FerI~~RFG-~k~~yvvIGDG~eEe~AAk~~n~PFwrI~~ 258 (274)
T 3geb_A 220 FERIMQRFG-RKAVYVVIGDGVEEEQGAKKHNMPFWRISC 258 (274)
T ss_dssp HHHHHHHHC-TTSEEEEEESSHHHHHHHHHTTCCEEECCS
T ss_pred HHHHHHHhC-CCceEEEECCCHHHHHHHHHcCCCeEEeec
Confidence 999999998 456778999999999999999999999863
|
| >2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1 | Back alignment and structure |
|---|
Probab=83.91 E-value=3.6 Score=37.07 Aligned_cols=33 Identities=12% Similarity=0.102 Sum_probs=26.6
Q ss_pred HHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEECC
Q 017455 308 AGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (371)
Q Consensus 308 ~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~ 345 (371)
.-++.-|++ ++|||+.. ...|++.||+++++.+
T Consensus 148 ~~l~~~G~~----vVVG~~~~-~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 148 NELKANGTE----AVVGAGLI-TDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHTTCC----EEEESHHH-HHHHHHTTSEEEESSC
T ss_pred HHHHHCCCC----EEECCHHH-HHHHHHcCCcEEEECC
Confidence 345566776 79998875 7789999999999984
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 371 | ||||
| d1swva_ | 257 | c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Ba | 1e-05 | |
| d2bdua1 | 291 | c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III | 6e-05 | |
| d1cr6a1 | 222 | c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal | 0.003 |
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Score = 44.0 bits (102), Expect = 1e-05
Identities = 22/110 (20%), Positives = 38/110 (34%), Gaps = 5/110 (4%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDR-MLVLF 144
AV+ G VD F + F F K G+ TA + D R + +
Sbjct: 4 AVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVA---ITAEEARKPMGLLKIDHVRALTEMP 60
Query: 145 FNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVD 194
W +A ++ + +E + L L + A GV++ +
Sbjct: 61 RIASEWNRVFRQLPTEADIQEMYEEFEEILFAILP-RYASPINGVKEVIA 109
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Score = 41.9 bits (98), Expect = 6e-05
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 170 KKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229
K L E +A D L+ G E+F GIP+ + +A + V+ + G
Sbjct: 121 PKAKLKEIVADSDVMLKEGYENFFGKLQQHGIPVFIFSA---GIGDVLEEVIRQAGVYH- 176
Query: 230 SKIKIVGNE 238
S +K+V N
Sbjct: 177 SNVKVVSNF 185
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 222 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Score = 36.7 bits (83), Expect = 0.003
Identities = 19/141 (13%), Positives = 35/141 (24%), Gaps = 4/141 (2%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
++DGVL AF + + L L T+ + + F
Sbjct: 2 VAAFDLDGVLALPSIA---GAFRRSEEALALPRDFLLGAYQTEFPEGPTEQLMKGKITFS 58
Query: 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPL-I 204
+ KA N+ + + A + + +G I
Sbjct: 59 QWVPLMDESYRKSSKACGANLPENFSISQIFSQAMAARSINRPMLQAAIALKKKGFTTCI 118
Query: 205 VLTAYGKSGDRIARSVVEKLG 225
V + GD+
Sbjct: 119 VTNNWLDDGDKRDSLAQMMCE 139
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 371 | |||
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 99.96 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 99.96 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 99.95 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 99.95 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 99.95 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 99.94 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 99.94 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 99.93 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 99.93 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 99.92 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 99.91 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 99.9 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 99.9 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 99.9 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 99.87 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 99.86 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 99.85 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 99.83 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 99.82 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 99.8 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 99.74 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.73 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 99.71 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.71 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 99.7 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.69 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 99.68 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 99.67 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 99.67 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 99.64 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.59 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 99.43 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.25 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 98.84 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 98.83 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 98.72 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.69 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.5 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 98.48 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.45 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.33 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 98.32 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.28 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.2 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 98.09 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.06 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 98.06 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 97.82 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 97.54 | |
| d2bdea1 | 458 | Cytosolic IMP-GMP specific 5'-nucleotidase {Legion | 97.23 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 96.48 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 96.26 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 95.52 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 94.29 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 94.25 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 92.8 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 92.11 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 91.96 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 91.01 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 89.9 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 89.12 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 88.29 | |
| d2pjua1 | 186 | Propionate catabolism operon regulatory protein Pr | 85.68 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 84.52 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 83.31 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 83.09 |
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=99.96 E-value=1.9e-29 Score=225.93 Aligned_cols=209 Identities=17% Similarity=0.191 Sum_probs=151.9
Q ss_pred CceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHHH
Q 017455 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (371)
Q Consensus 83 ~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~ 162 (371)
++||||||+||||+|+... +..+|+++++++|++. +.+. .+....+.........+....++....
T Consensus 2 ~i~a~iFD~DGTL~dt~~~-~~~a~~~~~~~~g~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 67 (218)
T d1te2a_ 2 QILAAIFDMDGLLIDSEPL-WDRAELDVMASLGVDI---SRRN--ELPDTLGLRIDMVVDLWYARQPWNGPS-------- 67 (218)
T ss_dssp CCCEEEECCBTTTBCCHHH-HHHHHHHHHHHTTCCG---GGGG--GSCCCTTCCHHHHHHHHHHHSCCSSSC--------
T ss_pred cceEEEECCCCcccCCHHH-HHHHHHHHHHHcCCCC---CHHH--HHHHHhCCCccchhhhhhhcccccchh--------
Confidence 6899999999999999887 8899999999999873 3221 111122222333434444454554332
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHh
Q 017455 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (371)
Q Consensus 163 ~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~ 242 (371)
...+.....+.+.+.+. ...+++||+.++|+.|+++|++++|+|| ++...+..+++.+|+.++|+.++. ++++.
T Consensus 68 ~~~~~~~~~~~~~~~~~-~~~~~~pg~~~~l~~L~~~g~~~~i~T~---~~~~~~~~~l~~~~l~~~F~~i~~-~~~~~- 141 (218)
T d1te2a_ 68 RQEVVERVIARAISLVE-ETRPLLPGVREAVALCKEQGLLVGLASA---SPLHMLEKVLTMFDLRDSFDALAS-AEKLP- 141 (218)
T ss_dssp HHHHHHHHHHHHHHHHH-HHCCBCTTHHHHHHHHHHTTCEEEEEES---SCHHHHHHHHHHTTCGGGCSEEEE-CTTSS-
T ss_pred HHHHHHHHHHHHHHhhh-ccccccchHHHHHHHhhhcccccccccc---cccccccccccccccccccccccc-ccccc-
Confidence 12333333344444332 2356899999999999999999999999 558889999999999999987543 33321
Q ss_pred hhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEE
Q 017455 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (371)
Q Consensus 243 ~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~ 322 (371)
..||+|++ |+.+++++|++|++|+|
T Consensus 142 -----------------------------------------~~Kp~~~~--------------~~~~~~~l~~~~~~~l~ 166 (218)
T d1te2a_ 142 -----------------------------------------YSKPHPQV--------------YLDCAAKLGVDPLTCVA 166 (218)
T ss_dssp -----------------------------------------CCTTSTHH--------------HHHHHHHHTSCGGGEEE
T ss_pred -----------------------------------------cchhhHHH--------------HHHHHHHcCCCchhcEE
Confidence 22788888 99999999999999999
Q ss_pred EeCCHhhHHHHHHcCCcEEEECCCCCCCc-ccccccccchHHHHh
Q 017455 323 IAGSQSGVAGAQRIGMPCVVMRSRCITTL-PVSKTQRLADMLCRI 366 (371)
Q Consensus 323 IgDs~~Di~aA~~aGm~~v~v~~~~~~~~-~l~~~~~~~~~l~~~ 366 (371)
|||+.+||.+|+++||++|+|.++..... ....++.+++++.|+
T Consensus 167 igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~l~el 211 (218)
T d1te2a_ 167 LEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTEL 211 (218)
T ss_dssp EESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGC
T ss_pred EeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECChhhC
Confidence 99999999999999999999987655444 335566666666553
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=99.96 E-value=4.9e-30 Score=228.82 Aligned_cols=205 Identities=13% Similarity=0.114 Sum_probs=156.8
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHH
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (371)
|++|+||||+||||+|+... +..+|+++++++|.+ ++.+.+...+. +... ..+.+.+.... +
T Consensus 1 M~~k~viFD~DGTL~ds~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~~---~~~~----~~~~~~~~~~~----~--- 62 (207)
T d2hdoa1 1 MTYQALMFDIDGTLTNSQPA-YTTVMREVLATYGKP---FSPAQAQKTFP---MAAE----QAMTELGIAAS----E--- 62 (207)
T ss_dssp CCCSEEEECSBTTTEECHHH-HHHHHHHHHHTTTCC---CCHHHHHHHTT---SCHH----HHHHHTTCCGG----G---
T ss_pred CCCcEEEEeCCCCcCcCHHH-HHHHHHHHHHHcCCC---CCHHHHHHHhc---chhh----hhhhccccchh----h---
Confidence 67999999999999999986 889999999999987 55555554432 2222 23344443321 1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHH
Q 017455 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (371)
Q Consensus 162 ~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~ 241 (371)
.+.+...+.+.+.+.. ...+++||+.++|+.|++ +++++|+|| +....+..+++++|+.++|+.+ +++++..
T Consensus 63 -~~~~~~~~~~~~~~~~--~~~~~~~g~~~~L~~l~~-~~~~~ivT~---~~~~~~~~~l~~~~l~~~f~~i-~~~~~~~ 134 (207)
T d2hdoa1 63 -FDHFQAQYEDVMASHY--DQIELYPGITSLFEQLPS-ELRLGIVTS---QRRNELESGMRSYPFMMRMAVT-ISADDTP 134 (207)
T ss_dssp -HHHHHHHHHHHHTTCG--GGCEECTTHHHHHHHSCT-TSEEEEECS---SCHHHHHHHHTTSGGGGGEEEE-ECGGGSS
T ss_pred -HHHHHHHhhhhhcccc--cccccccchhhhhhhhcc-ccccccccc---cccccccccccccccccccccc-ccccccc
Confidence 2233333333333332 246799999999999975 699999999 4588899999999999999874 3333221
Q ss_pred hhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 017455 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (371)
Q Consensus 242 ~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I 321 (371)
..||+|++ |+.+++++|++|++||
T Consensus 135 ------------------------------------------~~KP~p~~--------------~~~~~~~~~~~~~~~l 158 (207)
T d2hdoa1 135 ------------------------------------------KRKPDPLP--------------LLTALEKVNVAPQNAL 158 (207)
T ss_dssp ------------------------------------------CCTTSSHH--------------HHHHHHHTTCCGGGEE
T ss_pred ------------------------------------------cchhhhhh--------------hcccccceeeecccee
Confidence 23788888 9999999999999999
Q ss_pred EEeCCHhhHHHHHHcCCcEEEECCCCCCCcccccccccchHHHHhhh
Q 017455 322 LIAGSQSGVAGAQRIGMPCVVMRSRCITTLPVSKTQRLADMLCRILK 368 (371)
Q Consensus 322 ~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l~~~~~~~~~l~~~l~ 368 (371)
||||+.+|+.+|+++||.+|++.+|.........++.+++++.|+++
T Consensus 159 ~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i~~l~dll~ 205 (207)
T d2hdoa1 159 FIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDILE 205 (207)
T ss_dssp EEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGGGG
T ss_pred EecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEeCCHHHHHh
Confidence 99999999999999999999999888887777777888887777765
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=99.95 E-value=2.3e-28 Score=219.20 Aligned_cols=190 Identities=16% Similarity=0.205 Sum_probs=140.6
Q ss_pred ceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCC-hHHHHHHHHHHcCCCCCCCcchhHHH
Q 017455 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGD-EDRMLVLFFNRIGWPTSVPTNEKKAF 162 (371)
Q Consensus 84 ~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~g~~~~~~~~~~~~~ 162 (371)
+|+||||+||||+|++.. +..+|++++.++|++. .. +.+... ..+. .......+....+... . .+.
T Consensus 2 ikaiiFD~DGTL~ds~~~-~~~a~~~~~~~~g~~~--~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~--~----~~~ 68 (221)
T d1o08a_ 2 FKAVLFDLDGVITDTAEY-HFRAWKALAEEIGING--VD-RQFNEQ---LKGVSREDSLQKILDLADKKV--S----AEE 68 (221)
T ss_dssp CCEEEECCBTTTBTHHHH-HHHHHHHHHHHTTCCC--CC-HHHHTT---TTTCCHHHHHHHHHTTSSSCC--C----HHH
T ss_pred CcEEEEcCCCCeEcCHHH-HHHHHHHHHHHcCCCC--Ch-HHHHHH---Hhhccchhhhhhccccccccc--h----hhh
Confidence 799999999999999887 8899999999999873 22 222222 1222 2233333443333222 2 222
Q ss_pred HHHHHHHHHHHHHHHHhc-CCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHH
Q 017455 163 VKNVLQEKKNALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (371)
Q Consensus 163 ~~~l~~~~~~~~~~~l~~-~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~ 241 (371)
+..+.+...+.|.+.+.. ...+++||+.++|+.|+++|++++++||+ ......++.+|+.++|+.++.+. +.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~-----~~~~~~l~~~~l~~~f~~i~~~~-~~- 141 (221)
T d1o08a_ 69 FKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS-----KNGPFLLERMNLTGYFDAIADPA-EV- 141 (221)
T ss_dssp HHHHHHHHHHHHHHHTTTCCGGGBCTTHHHHHHHHHHTTCEEEECCSC-----TTHHHHHHHTTCGGGCSEECCTT-TS-
T ss_pred hhhHHHHHHhhccccccccccccccCCceeccccccccccceEEEeec-----chhhHHHHhhccccccccccccc-cc-
Confidence 345555666666666533 24679999999999999999999999994 34678899999999998754332 22
Q ss_pred hhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 017455 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (371)
Q Consensus 242 ~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I 321 (371)
. ..||+|++ |+.+++++|++|++||
T Consensus 142 -------------~----------------------------~~KP~~~~--------------~~~~l~~~~i~~~~~l 166 (221)
T d1o08a_ 142 -------------A----------------------------ASKPAPDI--------------FIAAAHAVGVAPSESI 166 (221)
T ss_dssp -------------S----------------------------SCTTSTHH--------------HHHHHHHTTCCGGGEE
T ss_pred -------------c----------------------------ccccChHH--------------HHHHHHHcCCCCceEE
Confidence 1 23788888 9999999999999999
Q ss_pred EEeCCHhhHHHHHHcCCcEEEECCCCC
Q 017455 322 LIAGSQSGVAGAQRIGMPCVVMRSRCI 348 (371)
Q Consensus 322 ~IgDs~~Di~aA~~aGm~~v~v~~~~~ 348 (371)
||||+.+|+.+|+++||++|+|.++..
T Consensus 167 ~VgD~~~di~~A~~aG~~~i~v~~~~~ 193 (221)
T d1o08a_ 167 GLEDSQAGIQAIKDSGALPIGVGRPED 193 (221)
T ss_dssp EEESSHHHHHHHHHHTCEEEEESCHHH
T ss_pred EEecCHHHHHHHHHcCCEEEEECChhh
Confidence 999999999999999999999987543
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=99.95 E-value=1.3e-27 Score=213.46 Aligned_cols=216 Identities=15% Similarity=0.140 Sum_probs=154.9
Q ss_pred CceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcC--CCCCCCcchhH
Q 017455 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIG--WPTSVPTNEKK 160 (371)
Q Consensus 83 ~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~~ 160 (371)
++|+|+||+||||+|+... +..+++++++++|... .+.+.+..+.+. .........+.... ....+. .
T Consensus 3 ~~k~iiFD~DGTL~Ds~~~-~~~a~~~~~~~~g~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~----~ 72 (224)
T d2hsza1 3 QFKLIGFDLDGTLVNSLPD-LALSINSALKDVNLPQ--ASENLVMTWIGN---GADVLSQRAVDWACKQAEKELT----E 72 (224)
T ss_dssp SCSEEEECSBTTTEECHHH-HHHHHHHHHHHTTCCC--CCHHHHHHHCSS---CHHHHHHHHHHHHHHHHTCCCC----H
T ss_pred CCCEEEEeCCCCcccCHHH-HHHHHHHHHHHCCCCC--CcHHHHHHHhhh---hhhhhhhhhhhhhhhhhhhhhh----H
Confidence 5899999999999999886 8899999999999873 555555444321 22211111111110 111111 1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhH
Q 017455 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 240 (371)
Q Consensus 161 ~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~ 240 (371)
.............+.+.. .....++||+.++|..|+++|++++|+||+ ....+..+++.+|+.++|+.++.+. ++
T Consensus 73 ~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~---~~~~~~~~l~~~gl~~~f~~~~~~~-~~ 147 (224)
T d2hsza1 73 DEFKYFKRQFGFYYGENL-CNISRLYPNVKETLEALKAQGYILAVVTNK---PTKHVQPILTAFGIDHLFSEMLGGQ-SL 147 (224)
T ss_dssp HHHHHHHHHHHHHHHHHT-TSSCEECTTHHHHHHHHHHTTCEEEEECSS---CHHHHHHHHHHTTCGGGCSEEECTT-TS
T ss_pred HHHHHHHHHHHHHHHHhh-ccccchHHHHHHHHHHHhccCCcccccccc---cHHHHHHHHHhcCchhhcccccccc-cc
Confidence 112222222333333322 346779999999999999999999999994 4788999999999999998754333 22
Q ss_pred HhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcE
Q 017455 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (371)
Q Consensus 241 ~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~ 320 (371)
. ..||.|++ |..+++++|++|++|
T Consensus 148 ~------------------------------------------~~kp~p~~--------------~~~~~~~~~~~~~~~ 171 (224)
T d2hsza1 148 P------------------------------------------EIKPHPAP--------------FYYLCGKFGLYPKQI 171 (224)
T ss_dssp S------------------------------------------SCTTSSHH--------------HHHHHHHHTCCGGGE
T ss_pred c------------------------------------------cccccchh--------------hHHHHHHhhhhhhcc
Confidence 1 23788887 999999999999999
Q ss_pred EEEeCCHhhHHHHHHcCCcEEEECCCCCCCcccc--cccccchHHHHhhhh
Q 017455 321 FLIAGSQSGVAGAQRIGMPCVVMRSRCITTLPVS--KTQRLADMLCRILKS 369 (371)
Q Consensus 321 I~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l~--~~~~~~~~l~~~l~~ 369 (371)
|||||+.+|+.+|+++||++|++.+++....++. .++.+++++.|+++-
T Consensus 172 ~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~l~dL~~i 222 (224)
T d2hsza1 172 LFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKI 222 (224)
T ss_dssp EEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGG
T ss_pred chhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECCHHHHHHh
Confidence 9999999999999999999999998877665554 456778777777653
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=99.95 E-value=1.3e-27 Score=219.51 Aligned_cols=197 Identities=16% Similarity=0.087 Sum_probs=142.9
Q ss_pred CceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhc-------CChHHHHHHHHHHcCCCCCCC
Q 017455 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSA-------GDEDRMLVLFFNRIGWPTSVP 155 (371)
Q Consensus 83 ~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~-------g~~~~~~~~~~~~~g~~~~~~ 155 (371)
++|+||||+||||+|+....+..+|.+++.++|++ .+.+.+...++... .....+...+...++....
T Consensus 1 kIkaviFD~dGTL~d~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 75 (257)
T d1swva_ 1 KIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVA---ITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPT-- 75 (257)
T ss_dssp CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCC---CCHHHHHTTTTSCHHHHHHHHHHSHHHHHHHHHHHSSCCC--
T ss_pred CcEEEEEcCCCCeEeCcchHHHHHHHHHHHHcCCC---CCHHHHHHHhCCcHHHHHHHHhhhhhhhHHHHHHhcccCC--
Confidence 47999999999999987754588999999999987 55555433221100 0001111122223333221
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheee
Q 017455 156 TNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIV 235 (371)
Q Consensus 156 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~ 235 (371)
...++.+...+.+.+.+.+ .....++||+.++|+.|+++|++++|+|| ++...+..+++++|+.++|...++
T Consensus 76 ----~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~L~~Lk~~g~~i~i~Tn---~~~~~~~~~l~~~~l~~~f~d~~~ 147 (257)
T d1swva_ 76 ----EADIQEMYEEFEEILFAIL-PRYASPINGVKEVIASLRERGIKIGSTTG---YTREMMDIVAKEAALQGYKPDFLV 147 (257)
T ss_dssp ----HHHHHHHHHHHHHHHHHHG-GGGCCBCTTHHHHHHHHHHTTCEEEEBCS---SCHHHHHHHHHHHHHTTCCCSCCB
T ss_pred ----HHHHHHHHHHHHHHHHHHh-hccCccCCcHHHHHHHHHhcccceeecCC---CchhhHHHHHHHHhhccccccccc
Confidence 2234455566666666655 33467999999999999999999999999 458889999999999988733344
Q ss_pred cchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCC
Q 017455 236 GNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK 315 (371)
Q Consensus 236 ~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv 315 (371)
+++++. ..||+|++ |..+++++|+
T Consensus 148 ~~d~~~------------------------------------------~~KP~p~~--------------~~~~~~~l~~ 171 (257)
T d1swva_ 148 TPDDVP------------------------------------------AGRPYPWM--------------CYKNAMELGV 171 (257)
T ss_dssp CGGGSS------------------------------------------CCTTSSHH--------------HHHHHHHHTC
T ss_pred cccccc------------------------------------------ccccChHH--------------HHHHHHHhCC
Confidence 443332 23888888 9999999999
Q ss_pred C-CCcEEEEeCCHhhHHHHHHcCCcEEEECCCCC
Q 017455 316 P-VRNCFLIAGSQSGVAGAQRIGMPCVVMRSRCI 348 (371)
Q Consensus 316 ~-p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~~~ 348 (371)
. +++||||||+.+||.+|+++||.+|+|.+|..
T Consensus 172 ~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~ 205 (257)
T d1swva_ 172 YPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSS 205 (257)
T ss_dssp CSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCT
T ss_pred CCcceEEEEeCChhhHHHHHHCCCEEEEEccCCC
Confidence 6 58999999999999999999999999998864
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.94 E-value=5.2e-27 Score=208.28 Aligned_cols=183 Identities=18% Similarity=0.200 Sum_probs=135.1
Q ss_pred eEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHHHHH
Q 017455 85 LAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVK 164 (371)
Q Consensus 85 kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 164 (371)
+|+|||+||||+|+... +..+|+++++++|++ ++.+....+... .....+...+....+.. .
T Consensus 2 ~a~iFD~DGTL~ds~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-----------~- 63 (204)
T d2go7a1 2 TAFIWDLDGTLLDSYEA-ILSGIEETFAQFSIP---YDKEKVREFIFK--YSVQDLLVRVAEDRNLD-----------V- 63 (204)
T ss_dssp CEEEECTBTTTEECHHH-HHHHHHHHHHHHTCC---CCHHHHHHHHHH--SCHHHHHHHHHHHHTCC-----------H-
T ss_pred EEEEEcCCCcCccCHHH-HHHHHHHHHHHcCCC---CCHHHHHHhhcc--cccccccccccchhhhh-----------H-
Confidence 59999999999999886 889999999999987 555555544432 22334444444443332 1
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhh
Q 017455 165 NVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSL 244 (371)
Q Consensus 165 ~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~ 244 (371)
+........+.... .....++||+.++|+.|+++|++++|+||+. . .+..+++++|+.++|+.++ +++++.
T Consensus 64 ~~~~~~~~~~~~~~-~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~---~-~~~~~l~~~gl~~~f~~i~-~s~~~~--- 134 (204)
T d2go7a1 64 EVLNQVRAQSLAEK-NAQVVLMPGAREVLAWADESGIQQFIYTHKG---N-NAFTILKDLGVESYFTEIL-TSQSGF--- 134 (204)
T ss_dssp HHHHHHHHHHHTTC-GGGCEECTTHHHHHHHHHHTTCEEEEECSSC---T-HHHHHHHHHTCGGGEEEEE-CGGGCC---
T ss_pred HHHHHHHHHHHHhh-cccCcccchHHhhhhcccccccchhhhcccc---h-hhhhhhhhccccccccccc-cccccc---
Confidence 11122221221111 2346789999999999999999999999943 3 4567899999999998754 433332
Q ss_pred hccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEe
Q 017455 245 YGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIA 324 (371)
Q Consensus 245 f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~Ig 324 (371)
..||+|++ |+.+++++|++|++|+|||
T Consensus 135 ---------------------------------------~~Kp~~~~--------------~~~~~~~~~~~p~~~l~Vg 161 (204)
T d2go7a1 135 ---------------------------------------VRKPSPEA--------------ATYLLDKYQLNSDNTYYIG 161 (204)
T ss_dssp ---------------------------------------CCTTSSHH--------------HHHHHHHHTCCGGGEEEEE
T ss_pred ---------------------------------------ccchhHHH--------------HHHHHHHhCCCCceEEEEe
Confidence 23788888 9999999999999999999
Q ss_pred CCHhhHHHHHHcCCcEEEECCCC
Q 017455 325 GSQSGVAGAQRIGMPCVVMRSRC 347 (371)
Q Consensus 325 Ds~~Di~aA~~aGm~~v~v~~~~ 347 (371)
|+.+|+.+|+++||++|++.++.
T Consensus 162 D~~~Di~~A~~~G~~~i~v~~~~ 184 (204)
T d2go7a1 162 DRTLDVEFAQNSGIQSINFLEST 184 (204)
T ss_dssp SSHHHHHHHHHHTCEEEESSCCS
T ss_pred CCHHHHHHHHHcCCeEEEEcCCC
Confidence 99999999999999999998663
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.94 E-value=3.8e-26 Score=204.70 Aligned_cols=188 Identities=18% Similarity=0.198 Sum_probs=143.1
Q ss_pred ceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHHHH
Q 017455 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (371)
Q Consensus 84 ~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 163 (371)
+|+||||+||||+|++.. +..+|+++++++|++ ++.+.+...+. +.....+...+..+.+.+.. .
T Consensus 2 ~kaviFD~DGtL~dt~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~------~--- 66 (222)
T d2fdra1 2 FDLIIFDCDGVLVDSEII-AAQVESRLLTEAGYP---ISVEEMGERFA--GMTWKNILLQVESEASIPLS------A--- 66 (222)
T ss_dssp CSEEEECSBTTTBCCHHH-HHHHHHHHHHHTTCC---CCHHHHHHHHT--TCCHHHHHHHHHHHHCCCCC------T---
T ss_pred ceEEEECCCCcccCCHHH-HHHHHHHHHHHcCCC---CCHHHHHHHHh--hhcccccccccccccccccc------c---
Confidence 789999999999999887 899999999999987 56555544332 22344566666777776544 1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhh
Q 017455 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243 (371)
Q Consensus 164 ~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~ 243 (371)
...+.....+.+.+.. ...++||+.++|+.|+. +.+++||+ ....+...++++|+.++|+..+++.++...
T Consensus 67 -~~~~~~~~~~~~~~~~-~~~~~~g~~~~L~~l~~---~~~i~t~~---~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~- 137 (222)
T d2fdra1 67 -SLLDKSEKLLDMRLER-DVKIIDGVKFALSRLTT---PRCICSNS---SSHRLDMMLTKVGLKPYFAPHIYSAKDLGA- 137 (222)
T ss_dssp -HHHHHHHHHHHHHHHH-HCCBCTTHHHHHHHCCS---CEEEEESS---CHHHHHHHHHHTTCGGGTTTCEEEHHHHCT-
T ss_pred -cchhHHHHHHHHHhhh-ccchhhhHHHHhhhccc---cceeeeec---chhhhhhhhcccccccccceeecccccccc-
Confidence 2233333334333322 36699999999988764 56799994 478899999999999999987666544321
Q ss_pred hhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEE
Q 017455 244 LYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLI 323 (371)
Q Consensus 244 ~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~I 323 (371)
...||+|++ |..+++++|++|++||||
T Consensus 138 ---------------------------------------~~~KP~~~~--------------~~~~~~~l~~~p~~~l~v 164 (222)
T d2fdra1 138 ---------------------------------------DRVKPKPDI--------------FLHGAAQFGVSPDRVVVV 164 (222)
T ss_dssp ---------------------------------------TCCTTSSHH--------------HHHHHHHHTCCGGGEEEE
T ss_pred ---------------------------------------cccccCHHH--------------HHHHHHhhCCCCceEEEE
Confidence 123788888 999999999999999999
Q ss_pred eCCHhhHHHHHHcCCcEEEECCCCC
Q 017455 324 AGSQSGVAGAQRIGMPCVVMRSRCI 348 (371)
Q Consensus 324 gDs~~Di~aA~~aGm~~v~v~~~~~ 348 (371)
||+..|+.+|+++||++|++.++..
T Consensus 165 gDs~~dv~aA~~aG~~~i~v~~~~~ 189 (222)
T d2fdra1 165 EDSVHGIHGARAAGMRVIGFTGASH 189 (222)
T ss_dssp ESSHHHHHHHHHTTCEEEEECCSTT
T ss_pred cCCHHHHHHHHHcCCEEEEEccCCC
Confidence 9999999999999999999988754
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.93 E-value=5.7e-27 Score=208.37 Aligned_cols=205 Identities=15% Similarity=0.205 Sum_probs=150.2
Q ss_pred CceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHHH
Q 017455 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (371)
Q Consensus 83 ~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~ 162 (371)
++|+||||+||||+|+... +..+|+++++++|++. .+.+.+..+. |.... ..+ .+. ++...
T Consensus 3 ~ik~VifD~DGTL~ds~~~-~~~a~~~~~~~~g~~~--~~~~~~~~~~----~~~~~--~~~-~~~-----~~~~~---- 63 (210)
T d2ah5a1 3 SITAIFFDLDGTLVDSSIG-IHNAFTYTFKELGVPS--PDAKTIRGFM----GPPLE--SSF-ATC-----LSKDQ---- 63 (210)
T ss_dssp TCCEEEECSBTTTEECHHH-HHHHHHHHHHHHTCCC--CCHHHHHHTS----SSCHH--HHH-HTT-----SCGGG----
T ss_pred CCCEEEEeCCCccccCHHH-HHHHHHHHHHHCCCCC--CCHHHHHHhh----hcchh--hhc-ccc-----ccchh----
Confidence 4899999999999999886 8899999999999873 4444443332 22211 112 111 12222
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHh
Q 017455 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (371)
Q Consensus 163 ~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~ 242 (371)
+......+...+.+.. ....+++||+.++|+.++.+ ++++|+|| ++...++.+++.+|+..+|+.++.+. +.
T Consensus 64 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~-~~~~i~t~---~~~~~~~~~l~~~gl~~~fd~v~~~~-~~-- 135 (210)
T d2ah5a1 64 ISEAVQIYRSYYKAKG-IYEAQLFPQIIDLLEELSSS-YPLYITTT---KDTSTAQDMAKNLEIHHFFDGIYGSS-PE-- 135 (210)
T ss_dssp HHHHHHHHHHHHHHTG-GGSCEECTTHHHHHHHHHTT-SCEEEEEE---EEHHHHHHHHHHTTCGGGCSEEEEEC-SS--
T ss_pred hHHHHHHHHHHHHhhh-hhcccchhHHHHHHhhhhcc-cchhhccc---ccchhhhHHHHhhccccccccccccc-cc--
Confidence 2233344444444433 23567899999999999876 59999999 55899999999999999998754322 11
Q ss_pred hhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEE
Q 017455 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (371)
Q Consensus 243 ~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~ 322 (371)
.||.|++ |+.+++++|++|++|+|
T Consensus 136 ------------------------------------------~~~~p~~--------------~~~~~~~~~~~~~~~v~ 159 (210)
T d2ah5a1 136 ------------------------------------------APHKADV--------------IHQALQTHQLAPEQAII 159 (210)
T ss_dssp ------------------------------------------CCSHHHH--------------HHHHHHHTTCCGGGEEE
T ss_pred ------------------------------------------ccccccc--------------cchhhhhhhccccccee
Confidence 1556666 99999999999999999
Q ss_pred EeCCHhhHHHHHHcCCcEEEECCCCCCCcccc--cccccchHHHHhhhhc
Q 017455 323 IAGSQSGVAGAQRIGMPCVVMRSRCITTLPVS--KTQRLADMLCRILKSI 370 (371)
Q Consensus 323 IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l~--~~~~~~~~l~~~l~~i 370 (371)
|||+.+|+.+|+++||++|+|.+|.....++. +++.+++++.|++..|
T Consensus 160 VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l~el~~~l 209 (210)
T d2ah5a1 160 IGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAYF 209 (210)
T ss_dssp EESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHHT
T ss_pred ecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHHh
Confidence 99999999999999999999998877666664 3567787777776643
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.93 E-value=1.3e-25 Score=197.67 Aligned_cols=179 Identities=16% Similarity=0.160 Sum_probs=133.6
Q ss_pred CCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHH
Q 017455 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (371)
|++|+||||+||||+|+... +..+|+++++++|++ ++.+.....++. ...... +.+....
T Consensus 1 M~~k~viFD~DGTL~dt~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~---~~~~~~----~~~~~~~--------- 60 (187)
T d2fi1a1 1 MKYHDYIWDLGGTLLDNYET-STAAFVETLALYGIT---QDHDSVYQALKV---STPFAI----ETFAPNL--------- 60 (187)
T ss_dssp CCCSEEEECTBTTTBCHHHH-HHHHHHHHHHHTTCC---CCHHHHHHHHHH---CHHHHH----HHHCTTC---------
T ss_pred CCCCEEEEeCCCCcccCHHH-HHHHHHHHHHHcCCC---ccHHHHHhhhhc---cchhhh----hhhhHHH---------
Confidence 78999999999999999886 899999999999987 566666555543 222222 2222111
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHH
Q 017455 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (371)
Q Consensus 162 ~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~ 241 (371)
+...+.+.+.+.+.. ....++||+.++|+.|+++|++++|+||+. ... ...++++++..+|+.+ ++++++.
T Consensus 61 --~~~~~~~~~~~~~~~--~~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~---~~~-~~~l~~~~l~~~fd~i-~~~~~~~ 131 (187)
T d2fi1a1 61 --ENFLEKYKENEAREL--EHPILFEGVSDLLEDISNQGGRHFLVSHRN---DQV-LEILEKTSIAAYFTEV-VTSSSGF 131 (187)
T ss_dssp --TTHHHHHHHHHHHHT--TSCCBCTTHHHHHHHHHHTTCEEEEECSSC---THH-HHHHHHTTCGGGEEEE-ECGGGCC
T ss_pred --HHHHHHHHHHHHHHh--hcCcccchhHHHHHHHHhhhccccccccCc---cch-hhhhhhhccccccccc-ccccccc
Confidence 122333333333333 346789999999999999999999999943 444 4578999999999874 3333332
Q ss_pred hhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 017455 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (371)
Q Consensus 242 ~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I 321 (371)
..||+|++ |+.+++++|+ ++||
T Consensus 132 ------------------------------------------~~KP~p~~--------------~~~~~~~~~~--~~~l 153 (187)
T d2fi1a1 132 ------------------------------------------KRKPNPES--------------MLYLREKYQI--SSGL 153 (187)
T ss_dssp ------------------------------------------CCTTSCHH--------------HHHHHHHTTC--SSEE
T ss_pred ------------------------------------------ccCCCHHH--------------HHHHHHHcCC--CCeE
Confidence 23888888 9999999996 5699
Q ss_pred EEeCCHhhHHHHHHcCCcEEEECCCC
Q 017455 322 LIAGSQSGVAGAQRIGMPCVVMRSRC 347 (371)
Q Consensus 322 ~IgDs~~Di~aA~~aGm~~v~v~~~~ 347 (371)
||||+..|+.+|+++||++|+++++.
T Consensus 154 ~vgDs~~Di~aA~~aG~~~i~v~~~~ 179 (187)
T d2fi1a1 154 VIGDRPIDIEAGQAAGLDTHLFTSIV 179 (187)
T ss_dssp EEESSHHHHHHHHHTTCEEEECSCHH
T ss_pred EEeCCHHHHHHHHHcCCEEEEECCCC
Confidence 99999999999999999999998643
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.92 E-value=3.3e-26 Score=206.47 Aligned_cols=210 Identities=15% Similarity=0.167 Sum_probs=142.8
Q ss_pred ceEEEEecCCccccccccCcHHHHHHHHHHc-CCCCCCCChHHHHHHHHhhcCChHHHHHHHHHHcCCCCCCCcchhHHH
Q 017455 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKL-GLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (371)
Q Consensus 84 ~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~-g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~ 162 (371)
.|+||||+||||+|+... +..+|.+++.++ |... ..... . ............++...++.. .+..+.
T Consensus 2 ~klviFD~DGTL~d~~~~-~~~~~~~~~~~~~~~~~---~~~~~-~---~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 69 (228)
T d2hcfa1 2 RTLVLFDIDGTLLKVESM-NRRVLADALIEVYGTEG---STGSH-D---FSGKMDGAIIYEVLSNVGLER----AEIADK 69 (228)
T ss_dssp CEEEEECCBTTTEEECTH-HHHHHHHHHHHHHSCCC---CC----C---CTTCCHHHHHHHHHHTTTCCH----HHHHHH
T ss_pred ceEEEEeCCCCcccCHHH-HHHHHHHHHHHHcCCCc---cHHHH-H---HhcCchHHHHHHHHHHhCCCh----HHHHHH
Confidence 579999999999999987 889998887774 5442 11111 0 111122223334445544432 122233
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCC-CcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHH
Q 017455 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEG-IPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (371)
Q Consensus 163 ~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~G-i~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~ 241 (371)
+....+.+...+.+.......+++||+.++|+.|+++| ++++|+||+ ....+...++.+|+.++|+.++.++ ++.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~~v~t~~---~~~~~~~~l~~~gl~~~fd~i~~~~-~~~ 145 (228)
T d2hcfa1 70 FDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGN---FEASGRHKLKLPGIDHYFPFGAFAD-DAL 145 (228)
T ss_dssp HHHHHHHHHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSS---CHHHHHHHHHTTTCSTTCSCEECTT-TCS
T ss_pred HHHHHHHHHHHHHHHhhccCceecCchHHHHhhhhccccccccccCCC---cchhhhhhhhhhccccccccccccc-ccc
Confidence 44445555555555554455678999999999999997 899999994 4788999999999999998754332 221
Q ss_pred hhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHc---CCCCC
Q 017455 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA---EKPVR 318 (371)
Q Consensus 242 ~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~l---gv~p~ 318 (371)
..||.|.+ +...+..+ |++|+
T Consensus 146 ------------------------------------------~~k~~p~~--------------~~~~~~~~~~~~~~p~ 169 (228)
T d2hcfa1 146 ------------------------------------------DRNELPHI--------------ALERARRMTGANYSPS 169 (228)
T ss_dssp ------------------------------------------SGGGHHHH--------------HHHHHHHHHCCCCCGG
T ss_pred ------------------------------------------cccchhHH--------------HHHHhhhhcccCCChh
Confidence 12566665 44444443 78999
Q ss_pred cEEEEeCCHhhHHHHHHcCCcEEEECCCCCCCcccc--cccccchHHHH
Q 017455 319 NCFLIAGSQSGVAGAQRIGMPCVVMRSRCITTLPVS--KTQRLADMLCR 365 (371)
Q Consensus 319 e~I~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~l~--~~~~~~~~l~~ 365 (371)
+||||||+.+|+.+|+++||++|+|.+|.....++. +++.+++++.+
T Consensus 170 ~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~~~~e 218 (228)
T d2hcfa1 170 QIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAE 218 (228)
T ss_dssp GEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCC
T ss_pred HheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEECCHHH
Confidence 999999999999999999999999998876666554 35555544433
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.91 E-value=2.7e-24 Score=194.19 Aligned_cols=123 Identities=12% Similarity=0.160 Sum_probs=101.0
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHH
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~ 262 (371)
..++||+.++|+.|++ |++++++||+ ........++.+|+.++|+.++.+. ++
T Consensus 99 ~~~~p~~~~~L~~l~~-~~~i~i~Sn~---~~~~~~~~l~~~gl~~~fd~i~~s~-~~---------------------- 151 (230)
T d1x42a1 99 GELYPEVVEVLKSLKG-KYHVGMITDS---DTEYLMAHLDALGIKDLFDSITTSE-EA---------------------- 151 (230)
T ss_dssp CCBCTTHHHHHHHHBT-TBEEEEEESS---CHHHHHHHHHHHTCGGGCSEEEEHH-HH----------------------
T ss_pred CcccccHHHHHHHhhc-cCceeeeecc---ccccchhhhcccccccccccccccc-cc----------------------
Confidence 5689999999999975 7999999994 4788999999999999999865433 32
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCcEE
Q 017455 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCV 341 (371)
Q Consensus 263 ~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~-~Di~aA~~aGm~~v 341 (371)
+..||+|++ |+.+++++|++|++|+||||+. +||.+|+++||++|
T Consensus 152 --------------------~~~KP~~~~--------------~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v 197 (230)
T d1x42a1 152 --------------------GFFKPHPRI--------------FELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSI 197 (230)
T ss_dssp --------------------TBCTTSHHH--------------HHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEE
T ss_pred --------------------cccchhhHH--------------HHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEE
Confidence 134888888 9999999999999999999985 79999999999999
Q ss_pred EECCCCCCCcccccccccchHHHHh
Q 017455 342 VMRSRCITTLPVSKTQRLADMLCRI 366 (371)
Q Consensus 342 ~v~~~~~~~~~l~~~~~~~~~l~~~ 366 (371)
++..+.........++++++++.++
T Consensus 198 ~v~~~~~~~~~~~~~d~~i~~l~el 222 (230)
T d1x42a1 198 LLDRKGEKREFWDKCDFIVSDLREV 222 (230)
T ss_dssp EECTTSCCGGGGGGSSEEESSTTHH
T ss_pred EECCCCCCcccccCCCEEECCHHHH
Confidence 9987666555556667765544443
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=1.1e-23 Score=189.21 Aligned_cols=109 Identities=10% Similarity=0.019 Sum_probs=92.3
Q ss_pred CCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchh
Q 017455 181 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (371)
Q Consensus 181 ~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~ 260 (371)
....++||+.++|..|+++|++++|+||+ ........++.+|+.++|+....+.+++.
T Consensus 124 ~~~~~~pg~~e~l~~L~~~g~~l~i~Tn~---~~~~~~~~~~~~~~~~~~~~~~~~~d~~~------------------- 181 (253)
T d1zs9a1 124 MKAEFFADVVPAVRKWREAGMKVYIYSSG---SVEAQKLLFGHSTEGDILELVDGHFDTKI------------------- 181 (253)
T ss_dssp CCBCCCTTHHHHHHHHHHTTCEEEEECSS---CHHHHHHHHHTBTTBCCGGGCSEEECGGG-------------------
T ss_pred cccccCCCHHHHHHHHhhccCceeecCCC---cHHHHHHHHHHcCcchhhhhcceeecccc-------------------
Confidence 34678999999999999999999999994 47888889999999988886543332221
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcE
Q 017455 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (371)
Q Consensus 261 ~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~ 340 (371)
..||+|++ |+.+++++|++|++||||||+.+||.+|+++||++
T Consensus 182 -----------------------~~KP~p~~--------------~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~t 224 (253)
T d1zs9a1 182 -----------------------GHKVESES--------------YRKIADSIGCSTNNILFLTDVTREASAAEEADVHV 224 (253)
T ss_dssp -----------------------CCTTCHHH--------------HHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEE
T ss_pred -----------------------ccCCCcHH--------------HHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEE
Confidence 23788888 99999999999999999999999999999999999
Q ss_pred EEECCCCC
Q 017455 341 VVMRSRCI 348 (371)
Q Consensus 341 v~v~~~~~ 348 (371)
|+|..+..
T Consensus 225 i~v~r~g~ 232 (253)
T d1zs9a1 225 AVVVRPGN 232 (253)
T ss_dssp EEECCTTC
T ss_pred EEEeCCCC
Confidence 99975543
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.90 E-value=3.6e-24 Score=194.74 Aligned_cols=216 Identities=13% Similarity=0.160 Sum_probs=133.7
Q ss_pred CCCceEEEEecCCccccccccCcHHHHHHHHHHcCCCCCCCChHH--HHHHH-Hhhc--------CChHH----HHHHHH
Q 017455 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPI--YTDLL-RKSA--------GDEDR----MLVLFF 145 (371)
Q Consensus 81 ~~~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~g~~~~~~~~~~--~~~~~-~~~~--------g~~~~----~~~~~~ 145 (371)
..++|+|+||+||||+|+... ...++.++++.++... .+.... +.... .... ..... .+...+
T Consensus 3 m~~IKaviFD~dGTL~d~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (247)
T d2gfha1 3 LSRVRAVFFDLDNTLIDTAGA-SRRGMLEVIKLLQSKY-HYKEEAEIICDKVQVKLSKECFHPYSTCITDVRTSHWEEAI 80 (247)
T ss_dssp CCCCCEEEECCBTTTBCHHHH-HHHHHHHHHHHHHHTT-CCCTHHHHHHHHHHHHHHTCCCC----CHHHHHHHHHHHHH
T ss_pred CCCCcEEEEcCCCCcCcChHH-HHHHHHHHHHHhcccc-CcHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHH
Confidence 356899999999999998875 7777877776654332 121111 11110 0000 00000 111112
Q ss_pred HHcCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcC
Q 017455 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLG 225 (371)
Q Consensus 146 ~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lg 225 (371)
.+.+.... .. .+.......+.... .....++||+.++|+.|+ +|++++|+||+ +.......++.+|
T Consensus 81 ~~~~~~~~-----~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~L~~L~-~~~~l~i~Tn~---~~~~~~~~l~~~g 146 (247)
T d2gfha1 81 QETKGGAD-----NR----KLAEECYFLWKSTR-LQHMILADDVKAMLTELR-KEVRLLLLTNG---DRQTQREKIEACA 146 (247)
T ss_dssp HHHHCSSC-----CH----HHHHHHHHHHHHHH-HHTCCCCHHHHHHHHHHH-TTSEEEEEECS---CHHHHHHHHHHHT
T ss_pred HHhccccc-----hH----HHHHHHHHHHHHhh-hccCccCccHHHHHHHhh-cccceEEeecc---cchhhhhhhhhcc
Confidence 22221111 01 12222222222222 234679999999999998 58999999994 4788899999999
Q ss_pred ccccchheeecchhHHhhhhccccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHH
Q 017455 226 SERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAA 305 (371)
Q Consensus 226 l~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~ 305 (371)
+.++|+.++.+. ++. ..||+|++
T Consensus 147 l~~~fd~i~~s~-~~~------------------------------------------~~KP~p~~-------------- 169 (247)
T d2gfha1 147 CQSYFDAIVIGG-EQK------------------------------------------EEKPAPSI-------------- 169 (247)
T ss_dssp CGGGCSEEEEGG-GSS------------------------------------------SCTTCHHH--------------
T ss_pred cccccccccccc-ccc------------------------------------------cchhhhhh--------------
Confidence 999998765433 221 23888888
Q ss_pred HHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCcEEEECCCC--CCCcccccccccchH---HHHhhhh
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRC--ITTLPVSKTQRLADM---LCRILKS 369 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~-~Di~aA~~aGm~~v~v~~~~--~~~~~l~~~~~~~~~---l~~~l~~ 369 (371)
|+.+++++|++|++||||||+. +||.+|+++||+++++.++. ........+++++++ +.++|+.
T Consensus 170 ~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~~l~eL~~ll~~ 239 (247)
T d2gfha1 170 FYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPALLQS 239 (247)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHHHHHHH
T ss_pred HHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEECCHHHHHHHHHH
Confidence 9999999999999999999996 79999999999866543222 222223345555444 4444444
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=99.90 E-value=7.5e-23 Score=182.18 Aligned_cols=127 Identities=12% Similarity=0.077 Sum_probs=105.2
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhH
Q 017455 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (371)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~ 261 (371)
...++|++.++++.++++|++++++||+ ........+..+++..+|+.++.+.+..
T Consensus 91 ~~~~~~~~~~~l~~l~~~~~~~~i~tn~---~~~~~~~~~~~~~~~~~fd~~~~s~~~~--------------------- 146 (220)
T d1zrna_ 91 RLAPFSEVPDSLRELKRRGLKLAILSNG---SPQSIDAVVSHAGLRDGFDHLLSVDPVQ--------------------- 146 (220)
T ss_dssp GCEECTTHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHTTCGGGCSEEEESGGGT---------------------
T ss_pred cccccchhHHHHHHHHhcCCeEEeecch---HHHHHHHHHhhccccccccceeeeeeee---------------------
Confidence 4668999999999999999999999994 4788889999999999999865544222
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 017455 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (371)
Q Consensus 262 ~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v 341 (371)
..||+|++ |+.+++++|++|++|+||||+..||.+|+++||++|
T Consensus 147 ----------------------~~KP~p~~--------------~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v 190 (220)
T d1zrna_ 147 ----------------------VYKPDNRV--------------YELAEQALGLDRSAILFVASNAWDATGARYFGFPTC 190 (220)
T ss_dssp ----------------------CCTTSHHH--------------HHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEE
T ss_pred ----------------------ccccHHHH--------------HHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEE
Confidence 23888888 999999999999999999999999999999999999
Q ss_pred EECCCCCCCcc-cccccccchHHHHhhh
Q 017455 342 VMRSRCITTLP-VSKTQRLADMLCRILK 368 (371)
Q Consensus 342 ~v~~~~~~~~~-l~~~~~~~~~l~~~l~ 368 (371)
++.++.....+ ...++.+++++.++++
T Consensus 191 ~v~r~~~~~~~~~~~~d~~i~~l~el~~ 218 (220)
T d1zrna_ 191 WINRTGNVFEEMGQTPDWEVTSLRAVVE 218 (220)
T ss_dssp EECTTCCCCCSSSCCCSEEESSHHHHHT
T ss_pred EEcCCCCCcccccCCCCEEECCHHHHHh
Confidence 99755443333 3445777888877664
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=1.5e-22 Score=178.74 Aligned_cols=109 Identities=10% Similarity=0.024 Sum_probs=88.8
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCC-CcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhH
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS-GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~-~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~ 261 (371)
..++||+.++|..|+++|++++++||...+ ............++.++|+.++.+. ++
T Consensus 98 ~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~-~~--------------------- 155 (225)
T d1zd3a1 98 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESC-QV--------------------- 155 (225)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHH-HH---------------------
T ss_pred CCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEecc-cc---------------------
Confidence 458999999999999999999999996532 2234445556677888888765433 22
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 017455 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (371)
Q Consensus 262 ~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v 341 (371)
+..||+|++ |+.+++.+|++|++||||||+..||.+|+++||++|
T Consensus 156 ---------------------~~~KP~~~~--------------~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti 200 (225)
T d1zd3a1 156 ---------------------GMVKPEPQI--------------YKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTI 200 (225)
T ss_dssp ---------------------TCCTTCHHH--------------HHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEE
T ss_pred ---------------------ccchhHHHH--------------HHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEE
Confidence 234889888 999999999999999999999999999999999999
Q ss_pred EECCCCC
Q 017455 342 VMRSRCI 348 (371)
Q Consensus 342 ~v~~~~~ 348 (371)
+|.++..
T Consensus 201 ~v~~~~~ 207 (225)
T d1zd3a1 201 LVQDTDT 207 (225)
T ss_dssp ECSSHHH
T ss_pred EECCcch
Confidence 9986543
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.86 E-value=3.3e-23 Score=184.50 Aligned_cols=110 Identities=12% Similarity=0.085 Sum_probs=92.1
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCC-CCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhH
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGK-SGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~-~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~ 261 (371)
..++||+.++|..|+++|++++++||+.. .........+..+|+.++|+.++. ++++
T Consensus 96 ~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~-s~~~--------------------- 153 (222)
T d1cr6a1 96 RSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIE-SCQV--------------------- 153 (222)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEE-HHHH---------------------
T ss_pred CCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeee-hhhc---------------------
Confidence 56899999999999999999999998542 234456666788899999998544 3332
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 017455 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (371)
Q Consensus 262 ~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v 341 (371)
+..||+|++ |+.+++++|++|++||||||+.+||.+|+++||++|
T Consensus 154 ---------------------~~~KP~p~~--------------~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti 198 (222)
T d1cr6a1 154 ---------------------GMIKPEPQI--------------YNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTI 198 (222)
T ss_dssp ---------------------SCCTTCHHH--------------HHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEE
T ss_pred ---------------------cCCCCChHH--------------HHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEE
Confidence 234888888 999999999999999999999999999999999999
Q ss_pred EECCCCCC
Q 017455 342 VMRSRCIT 349 (371)
Q Consensus 342 ~v~~~~~~ 349 (371)
+|.++...
T Consensus 199 ~V~~~~~~ 206 (222)
T d1cr6a1 199 LVHNTASA 206 (222)
T ss_dssp ECCSSSHH
T ss_pred EECCcchH
Confidence 99876553
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.85 E-value=3.1e-22 Score=180.76 Aligned_cols=103 Identities=12% Similarity=0.133 Sum_probs=88.4
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhH
Q 017455 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (371)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~ 261 (371)
...++|++.++|+.|+ ++.++++|| +....+...+.++|+.++|+.++.+. ++.
T Consensus 91 ~~~~~~~~~~~L~~l~--~~~~~v~s~---~~~~~~~~~~~~~~~~~~fd~v~~s~-~~~-------------------- 144 (245)
T d1qq5a_ 91 RLTPYPDAAQCLAELA--PLKRAILSN---GAPDMLQALVANAGLTDSFDAVISVD-AKR-------------------- 144 (245)
T ss_dssp SCCBCTTHHHHHHHHT--TSEEEEEES---SCHHHHHHHHHHTTCGGGCSEEEEGG-GGT--------------------
T ss_pred ccccchhhhHHHHHHh--hhceeEEec---cchHHHHHHHhhcccccccccccccc-ccc--------------------
Confidence 4678999999999885 689999999 44788889999999999998754433 321
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 017455 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (371)
Q Consensus 262 ~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v 341 (371)
..||+|++ |+.+++++|++|++||||||+.+||.+|+++||++|
T Consensus 145 ----------------------~~KP~p~~--------------f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~tv 188 (245)
T d1qq5a_ 145 ----------------------VFKPHPDS--------------YALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVA 188 (245)
T ss_dssp ----------------------CCTTSHHH--------------HHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEE
T ss_pred ----------------------ccCccHHH--------------HHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCeEE
Confidence 23888888 999999999999999999999999999999999999
Q ss_pred EECCC
Q 017455 342 VMRSR 346 (371)
Q Consensus 342 ~v~~~ 346 (371)
+|+.+
T Consensus 189 ~v~r~ 193 (245)
T d1qq5a_ 189 RVARL 193 (245)
T ss_dssp EECCS
T ss_pred EEcCC
Confidence 99744
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=99.83 E-value=9.1e-22 Score=169.54 Aligned_cols=106 Identities=13% Similarity=0.210 Sum_probs=85.9
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHc-CccccchheeecchhHHhhhhccccccccccCCchh
Q 017455 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL-GSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (371)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~l-gl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~ 260 (371)
...+++|+.+++..++.+|++++++||+. .......+..+ ++.++|+.++.+. +.
T Consensus 82 ~~~~~~~~~~l~~~l~~~~~~~~i~t~~~---~~~~~~~~~~~~~l~~~fd~v~~s~-~~-------------------- 137 (197)
T d2b0ca1 82 FVALRPEVIAIMHKLREQGHRVVVLSNTN---RLHTTFWPEEYPEIRDAADHIYLSQ-DL-------------------- 137 (197)
T ss_dssp EEEECHHHHHHHHHHHHTTCEEEEEECCC---CCTTSCCGGGCHHHHHHCSEEEEHH-HH--------------------
T ss_pred ccccCchhHHHHHHHHhcCCeEEEEeCcc---HHHHHHHHHHcccchhhccceeecc-cc--------------------
Confidence 35689999999999999999999999954 33334445554 7778888754332 22
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcE
Q 017455 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (371)
Q Consensus 261 ~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~ 340 (371)
+..||+|++ |+.+++++|++|++||||||+.+|+++|+++||++
T Consensus 138 ----------------------~~~Kp~~~~--------------~~~~~~~~~~~~~~~l~vgDs~~di~~A~~aG~~t 181 (197)
T d2b0ca1 138 ----------------------GMRKPEARI--------------YQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITS 181 (197)
T ss_dssp ----------------------TCCTTCHHH--------------HHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred ----------------------cccccchHH--------------HHHHHHhcCCCCCeEEEEeCCHHHHHHHHHcCCEE
Confidence 234788888 99999999999999999999999999999999999
Q ss_pred EEECCCC
Q 017455 341 VVMRSRC 347 (371)
Q Consensus 341 v~v~~~~ 347 (371)
|+++.+.
T Consensus 182 i~v~~~~ 188 (197)
T d2b0ca1 182 ILVKDKT 188 (197)
T ss_dssp EECCSTT
T ss_pred EEECCCC
Confidence 9998654
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.82 E-value=4.7e-21 Score=165.66 Aligned_cols=103 Identities=13% Similarity=0.187 Sum_probs=87.5
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhH
Q 017455 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (371)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~ 261 (371)
.++++||+.++|+.|+++|++++|+||+. .....+..++.+++.++|..+..+
T Consensus 44 ~~~l~pgv~e~L~~L~~~G~~~~v~S~~~--~~~~~~~~l~~~~~~~~~~~~~~~------------------------- 96 (164)
T d1u7pa_ 44 NIQLYPEVPEVLGRLQSLGVPVAAASRTS--EIQGANQLLELFDLGKYFIQREIY------------------------- 96 (164)
T ss_dssp EECCCTTHHHHHHHHHHTTCCEEEEECCS--CHHHHHHHHHHTTCGGGCSEEEES-------------------------
T ss_pred ccccchHHHHHHHHHHHCCCcEEEEeccc--cchhhccchhcccccccceeeecc-------------------------
Confidence 46799999999999999999999999853 235667778899998887654211
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 017455 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (371)
Q Consensus 262 ~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v 341 (371)
.||+|+. |..+++++|++|++||||||+..|+++|+++||++|
T Consensus 97 -----------------------~kp~~~~--------------~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~i 139 (164)
T d1u7pa_ 97 -----------------------PGSKVTH--------------FERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCI 139 (164)
T ss_dssp -----------------------SSCHHHH--------------HHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred -----------------------cCCChHH--------------HHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEEE
Confidence 1666666 999999999999999999999999999999999999
Q ss_pred EECCCCC
Q 017455 342 VMRSRCI 348 (371)
Q Consensus 342 ~v~~~~~ 348 (371)
+|.+|.+
T Consensus 140 ~v~~G~~ 146 (164)
T d1u7pa_ 140 HIRDGMS 146 (164)
T ss_dssp ECSSCCC
T ss_pred EECCCCC
Confidence 9998864
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.80 E-value=1.2e-19 Score=160.57 Aligned_cols=101 Identities=8% Similarity=0.057 Sum_probs=74.7
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHH-----------HHHHcCccccchheeecchhHHhhhhccccc
Q 017455 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARS-----------VVEKLGSERISKIKIVGNEEVERSLYGQFVL 250 (371)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~-----------~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~ 250 (371)
...+.+++.+++. .+..+++.|+.. ...... .+..+|+.++|+.+ ++++..
T Consensus 95 ~~~~~~~~~~~~~----~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~l~~~Fd~v-~~~~~~---------- 156 (225)
T d2g80a1 95 KAPVYADAIDFIK----RKKRVFIYSSGS---VKAQKLLFGYVQDPNAPAHDSLDLNSYIDGY-FDINTS---------- 156 (225)
T ss_dssp CBCCCHHHHHHHH----HCSCEEEECSSC---HHHHHHHHHSBCCTTCTTSCCBCCGGGCCEE-ECHHHH----------
T ss_pred cccchhhHHHHHh----hHHhhhhhhhcc---chhhhhhhhhhhhhHHHHHHhcCCcccccee-eecccc----------
Confidence 3457777777764 456788888742 222222 23456777888764 333222
Q ss_pred cccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhH
Q 017455 251 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 330 (371)
Q Consensus 251 g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di 330 (371)
..||+|++ |+.+++++|++|++|+||||+.+||
T Consensus 157 ---------------------------------~~KP~p~~--------------f~~~~~~lg~~p~e~l~VgD~~~Dv 189 (225)
T d2g80a1 157 ---------------------------------GKKTETQS--------------YANILRDIGAKASEVLFLSDNPLEL 189 (225)
T ss_dssp ---------------------------------CCTTCHHH--------------HHHHHHHHTCCGGGEEEEESCHHHH
T ss_pred ---------------------------------CCCCChhH--------------hHHHHHhcccCchhceeecCCHHHH
Confidence 23888888 9999999999999999999999999
Q ss_pred HHHHHcCCcEEEECCCC
Q 017455 331 AGAQRIGMPCVVMRSRC 347 (371)
Q Consensus 331 ~aA~~aGm~~v~v~~~~ 347 (371)
.+|+++||++|+|..+.
T Consensus 190 ~~A~~aG~~ti~v~r~g 206 (225)
T d2g80a1 190 DAAAGVGIATGLASRPG 206 (225)
T ss_dssp HHHHTTTCEEEEECCTT
T ss_pred HHHHHcCCEEEEEeCCC
Confidence 99999999999997543
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=99.74 E-value=4.5e-18 Score=155.87 Aligned_cols=65 Identities=8% Similarity=0.135 Sum_probs=54.7
Q ss_pred HHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCcEEEECCCCCCCcccccccccchHHHHhhhhc
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCITTLPVSKTQRLADMLCRILKSI 370 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~-~Di~aA~~aGm~~v~v~~~~~~~~~l~~~~~~~~~l~~~l~~i 370 (371)
|+.+++++|++|++|+||||+. +||.+|+++||++|+|.+|......+......+|.+++.+.+|
T Consensus 182 ~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~~sl~eL 247 (250)
T d2c4na1 182 IRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEI 247 (250)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGC
T ss_pred HhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhCCCCCCEEECCHHHh
Confidence 9999999999999999999997 5999999999999999999877777765544456666666555
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.73 E-value=4e-18 Score=152.32 Aligned_cols=110 Identities=15% Similarity=0.109 Sum_probs=78.7
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchh-eeecchhHHhhhhccccccccccCCchhH
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI-KIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~-~i~~~~~~~~~~f~~~v~g~~v~~~~~~~ 261 (371)
.+++||+.++|+.|+++|++++++|| +....++.+++++|+.++|.. .+...++... ..+......
T Consensus 74 ~~l~pg~~~~l~~L~~~g~~~~ivS~---~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~------~~~~~~~~~---- 140 (226)
T d2feaa1 74 AKIREGFREFVAFINEHEIPFYVISG---GMDFFVYPLLEGIVEKDRIYCNHASFDNDYIH------IDWPHSCKG---- 140 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEE---EEHHHHHHHHTTTSCGGGEEEEEEECSSSBCE------EECTTCCCT----
T ss_pred cchhHHHHHHHHHHHhcccccccCCc---chhhhHHHHHHHcCCccceeeeeEEEeCCcce------ecccccccc----
Confidence 56999999999999999999999999 558999999999998776522 1111111000 000000000
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcE
Q 017455 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (371)
Q Consensus 262 ~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~ 340 (371)
...||.|.. ...+++++++++++|+||||+.+|+.||++||+.+
T Consensus 141 ---------------------~~~~~k~~~--------------~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~ 184 (226)
T d2feaa1 141 ---------------------TCSNQCGCC--------------KPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCF 184 (226)
T ss_dssp ---------------------TCCSCCSSC--------------HHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEE
T ss_pred ---------------------ccccCCHHH--------------HHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEE
Confidence 011344444 78889999999999999999999999999999744
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=99.71 E-value=9.9e-18 Score=150.91 Aligned_cols=53 Identities=9% Similarity=0.136 Sum_probs=48.3
Q ss_pred hccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEECCCCCCC
Q 017455 284 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSRCITT 350 (371)
Q Consensus 284 ~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~~~~~ 350 (371)
.+||+|.+ +..+++++|+++++|+||||+.+|+++|++|||+++++.++....
T Consensus 127 ~rKP~p~m--------------l~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~~~~ 179 (209)
T d2o2xa1 127 MRKPNPGM--------------LVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAV 179 (209)
T ss_dssp TSTTSCHH--------------HHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEE
T ss_pred cccccchh--------------hhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEeCCCCcc
Confidence 45888888 999999999999999999999999999999999999998776543
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.71 E-value=5.8e-18 Score=152.42 Aligned_cols=115 Identities=11% Similarity=0.166 Sum_probs=75.0
Q ss_pred cCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCch
Q 017455 180 SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVD 259 (371)
Q Consensus 180 ~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~ 259 (371)
.....++||+.++|+.|+++|++++|+|+ +....++.+++.+|++... +++++-.. ..++.++|..
T Consensus 78 ~~~~~l~pg~~~~i~~lk~~G~~~~ivS~---~~~~~v~~i~~~lgi~~~~---v~an~~~~--~~~G~~~g~~------ 143 (217)
T d1nnla_ 78 EQPPHLTPGIRELVSRLQERNVQVFLISG---GFRSIVEHVASKLNIPATN---VFANRLKF--YFNGEYAGFD------ 143 (217)
T ss_dssp HSCCCBCTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHTTCCGGG---EEEECEEE--CTTSCEEEEC------
T ss_pred hhccccCHHHHHHHHHHHhCCCEEEEECC---CchHHHHHHHHHhCCcccc---eeeeeeee--eehhccccce------
Confidence 34577999999999999999999999999 6689999999999997532 11110000 0011122211
Q ss_pred hHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCc
Q 017455 260 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 339 (371)
Q Consensus 260 ~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~ 339 (371)
++.|.. +.+....+ ++...+ +.++++|++||||.+|+.|++.+|+.
T Consensus 144 --------------------------~~~p~~---~~~~K~~~---v~~~~~--~~~~~~~~~vGDs~~Di~~~~~ag~~ 189 (217)
T d1nnla_ 144 --------------------------ETQPTA---ESGGKGKV---IKLLKE--KFHFKKIIMIGDGATDMEACPPADAF 189 (217)
T ss_dssp --------------------------TTSGGG---STTHHHHH---HHHHHH--HHCCSCEEEEESSHHHHTTTTTSSEE
T ss_pred --------------------------eeeeee---ccchHHHH---HHHHHh--ccCccccEEEEeCHhhHHHHHhCCce
Confidence 122211 11111122 344444 35689999999999999999999987
Q ss_pred EEE
Q 017455 340 CVV 342 (371)
Q Consensus 340 ~v~ 342 (371)
+++
T Consensus 190 va~ 192 (217)
T d1nnla_ 190 IGF 192 (217)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=99.70 E-value=6.5e-18 Score=146.11 Aligned_cols=111 Identities=12% Similarity=0.149 Sum_probs=74.4
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCC-----Cc-------HHHHHHHHHcCccccchheeecchhHHhhhhccccc
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS-----GD-------RIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 250 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~-----~~-------~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~ 250 (371)
+.++||+.++|+.|+++|++++++||.+.- .. ......+...|+.. +.+.+ ...+.
T Consensus 29 ~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~--~~i~~----------~~~~~ 96 (161)
T d2fpwa1 29 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQF--DEVLI----------CPHLP 96 (161)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCE--EEEEE----------ECCCG
T ss_pred ceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhcccccccc--ceeee----------ccccc
Confidence 458999999999999999999999994300 00 11233344444421 11001 00011
Q ss_pred cccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhH
Q 017455 251 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 330 (371)
Q Consensus 251 g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di 330 (371)
.++. ..+||+|++ ++.+++++|++|++|+||||+..|+
T Consensus 97 ~~~~----------------------------~~~KP~p~~--------------~~~~~~~~~id~~~~~~IGD~~~Di 134 (161)
T d2fpwa1 97 ADEC----------------------------DCRKPKVKL--------------VERYLAEQAMDRANSYVIGDRATDI 134 (161)
T ss_dssp GGCC----------------------------SSSTTSSGG--------------GGGGC----CCGGGCEEEESSHHHH
T ss_pred cccc----------------------------cccccccHH--------------HHHHHHhcCCChhcEEEECCCHHHH
Confidence 1111 134899999 9999999999999999999999999
Q ss_pred HHHHHcCCcEEEECCCC
Q 017455 331 AGAQRIGMPCVVMRSRC 347 (371)
Q Consensus 331 ~aA~~aGm~~v~v~~~~ 347 (371)
++|++|||++|++.+..
T Consensus 135 ~aA~~aG~~~i~i~~~~ 151 (161)
T d2fpwa1 135 QLAENMGINGLRYDRET 151 (161)
T ss_dssp HHHHHHTSEEEECBTTT
T ss_pred HHHHHcCCeEEEECCCC
Confidence 99999999999997553
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.69 E-value=6e-17 Score=158.06 Aligned_cols=136 Identities=14% Similarity=0.055 Sum_probs=98.1
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchhe-eecchhHHhhhhccccccccccCCchhH
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIK-IVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~-i~~~~~~~~~~f~~~v~g~~v~~~~~~~ 261 (371)
++|+||+.++|+.|+++|++++++|| .+...++.+++++|+.++|+.. +++.+++..... ......
T Consensus 214 i~p~~~v~~~l~~lk~aGi~v~i~Tg---~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~---~~~~~~------- 280 (380)
T d1qyia_ 214 LRPVDEVKVLLNDLKGAGFELGIATG---RPYTETVVPFENLGLLPYFEADFIATASDVLEAEN---MYPQAR------- 280 (380)
T ss_dssp SSCHHHHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHH---HSTTSC-------
T ss_pred ccchhhHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCcccCCcceEEecchhhhhhh---hccccc-------
Confidence 34677999999999999999999999 5589999999999999998643 344444322100 000001
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHH--------------cCCCCCcEEEEeCCH
Q 017455 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEY--------------AEKPVRNCFLIAGSQ 327 (371)
Q Consensus 262 ~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~--------------lgv~p~e~I~IgDs~ 327 (371)
...||+|++ |..++.. +++++++|+||||+.
T Consensus 281 ---------------------~~~KP~p~~--------------~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~ 325 (380)
T d1qyia_ 281 ---------------------PLGKPNPFS--------------YIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSL 325 (380)
T ss_dssp ---------------------CCCTTSTHH--------------HHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSH
T ss_pred ---------------------cccCCChHH--------------HHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCH
Confidence 123677766 6766644 567789999999999
Q ss_pred hhHHHHHHcCCcEEEECCCCCCCc---cc--ccccccchHHHHh
Q 017455 328 SGVAGAQRIGMPCVVMRSRCITTL---PV--SKTQRLADMLCRI 366 (371)
Q Consensus 328 ~Di~aA~~aGm~~v~v~~~~~~~~---~l--~~~~~~~~~l~~~ 366 (371)
+|+.||++||+++|+|.+|..... ++ .+++.+++++.++
T Consensus 326 ~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~el 369 (380)
T d1qyia_ 326 ADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGEL 369 (380)
T ss_dssp HHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGH
T ss_pred HHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEECCHHHH
Confidence 999999999999999988765432 22 2577776555444
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=99.68 E-value=6.5e-17 Score=148.33 Aligned_cols=65 Identities=11% Similarity=0.126 Sum_probs=54.7
Q ss_pred HHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCcEEEECCCCCCCccccc----ccccchHHHHhhhhc
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCITTLPVSK----TQRLADMLCRILKSI 370 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~-~Di~aA~~aGm~~v~v~~~~~~~~~l~~----~~~~~~~l~~~l~~i 370 (371)
|+.+++++|++|++|+||||+. +||.+|+++||++|+|.+|......+.. ++++++++.|+++-|
T Consensus 191 ~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~~~l 260 (261)
T d1vjra_ 191 VDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKAV 260 (261)
T ss_dssp HHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHH
T ss_pred HHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHh
Confidence 9999999999999999999996 5999999999999999998776655443 366777777776543
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=99.67 E-value=8.6e-17 Score=140.96 Aligned_cols=72 Identities=11% Similarity=0.166 Sum_probs=58.7
Q ss_pred hccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcE-EEECCCCCCCccc-ccccccch
Q 017455 284 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC-VVMRSRCITTLPV-SKTQRLAD 361 (371)
Q Consensus 284 ~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~-v~v~~~~~~~~~l-~~~~~~~~ 361 (371)
.+||+|.+ ++.++++++++|++++||||+.+|+++|++||+.+ +++.+++...... ..++++++
T Consensus 106 ~rKP~p~m--------------~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~ 171 (182)
T d2gmwa1 106 CRKPHPGM--------------LLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLN 171 (182)
T ss_dssp SSTTSCHH--------------HHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEES
T ss_pred ccCCcccc--------------ccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEEC
Confidence 45888888 99999999999999999999999999999999975 7788776554433 34677877
Q ss_pred HHHHhhhh
Q 017455 362 MLCRILKS 369 (371)
Q Consensus 362 ~l~~~l~~ 369 (371)
++.|+++-
T Consensus 172 ~l~dl~~~ 179 (182)
T d2gmwa1 172 SLADLPQA 179 (182)
T ss_dssp CGGGHHHH
T ss_pred CHHHHHHH
Confidence 77666654
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.67 E-value=6.9e-17 Score=147.79 Aligned_cols=66 Identities=8% Similarity=0.108 Sum_probs=55.6
Q ss_pred HHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCcEEEECCCCCCCcccccccccchHHHHhhhhcC
Q 017455 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSRCITTLPVSKTQRLADMLCRILKSIT 371 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs~-~Di~aA~~aGm~~v~v~~~~~~~~~l~~~~~~~~~l~~~l~~i~ 371 (371)
|+++++++|++|++|+||||+. +||++|+++||++|+|.+|......+......+|.+++.|+|++
T Consensus 186 ~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~sl~e~~ 252 (253)
T d1yv9a1 186 MERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEWT 252 (253)
T ss_dssp HHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGCC
T ss_pred HHHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhcCCCCCEEECCHHHcC
Confidence 9999999999999999999997 59999999999999999987766666555545667777777764
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=99.64 E-value=2.8e-16 Score=143.92 Aligned_cols=71 Identities=7% Similarity=0.080 Sum_probs=58.8
Q ss_pred cCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHh-hHHHHHHcCCcEEEECCCCCCCcccccccccchHHH
Q 017455 286 KLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQS-GVAGAQRIGMPCVVMRSRCITTLPVSKTQRLADMLC 364 (371)
Q Consensus 286 KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~-Di~aA~~aGm~~v~v~~~~~~~~~l~~~~~~~~~l~ 364 (371)
||+|.+ |+.+++++|++|++|+||||+.. ||.+|+++||++|+|.+|....+++......+|.++
T Consensus 180 KP~p~~--------------~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi 245 (253)
T d1wvia_ 180 KPEAVI--------------MNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVL 245 (253)
T ss_dssp TTSHHH--------------HHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEE
T ss_pred cCCccc--------------ceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEE
Confidence 788888 99999999999999999999975 999999999999999998777666665544455555
Q ss_pred Hhhhhc
Q 017455 365 RILKSI 370 (371)
Q Consensus 365 ~~l~~i 370 (371)
+.|.+|
T Consensus 246 ~sl~e~ 251 (253)
T d1wvia_ 246 SSLAEW 251 (253)
T ss_dssp SCGGGC
T ss_pred CCHHHc
Confidence 555554
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.59 E-value=1.1e-15 Score=132.91 Aligned_cols=111 Identities=13% Similarity=0.153 Sum_probs=81.0
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhH
Q 017455 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (371)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~ 261 (371)
..++.+|+.++++.++.+|+.++++|+ +..........+.+...++...+...+.... .......
T Consensus 73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~------- 137 (210)
T d1j97a_ 73 RITPTEGAEETIKELKNRGYVVAVVSG---GFDIAVNKIKEKLGLDYAFANRLIVKDGKLT-----GDVEGEV------- 137 (210)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHHTCSEEEEEEEEEETTEEE-----EEEECSS-------
T ss_pred hhhhhhhHHHHHHHHHHcCCEEEeecc---cccccccchhhccchhhhhhhhhcccccccc-----ccccccc-------
Confidence 356899999999999999999999999 5578888888888888776553322211100 0000001
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 017455 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (371)
Q Consensus 262 ~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v 341 (371)
+...+.+.. +...++.++++++++++|||+.+|+.|++.||+.++
T Consensus 138 --------------------------------~~~~~~~~~---~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va 182 (210)
T d1j97a_ 138 --------------------------------LKENAKGEI---LEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIA 182 (210)
T ss_dssp --------------------------------CSTTHHHHH---HHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEE
T ss_pred --------------------------------cccccccch---hhhHHHHhcccccceEEecCCcChHHHHHHCCCCEE
Confidence 111222222 788899999999999999999999999999999876
Q ss_pred E
Q 017455 342 V 342 (371)
Q Consensus 342 ~ 342 (371)
+
T Consensus 183 ~ 183 (210)
T d1j97a_ 183 F 183 (210)
T ss_dssp E
T ss_pred E
Confidence 5
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=99.43 E-value=1.2e-13 Score=115.59 Aligned_cols=42 Identities=19% Similarity=0.041 Sum_probs=34.0
Q ss_pred HHHHHHHcCCCCCc-EEEEeCCHhhHHHHHHcCCcEEEECCCC
Q 017455 306 LRAGAEYAEKPVRN-CFLIAGSQSGVAGAQRIGMPCVVMRSRC 347 (371)
Q Consensus 306 ~~~a~~~lgv~p~e-~I~IgDs~~Di~aA~~aGm~~v~v~~~~ 347 (371)
....+..+..+..+ +++|||+..||+||+++|++|+.|.+|.
T Consensus 106 k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~~Gd 148 (149)
T d1ltqa1 106 KEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASGD 148 (149)
T ss_dssp HHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCCC
T ss_pred HHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCcEEEeCCCC
Confidence 45556666666655 4678999999999999999999998773
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.25 E-value=6.7e-12 Score=108.32 Aligned_cols=105 Identities=13% Similarity=0.064 Sum_probs=75.3
Q ss_pred CCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchh
Q 017455 181 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (371)
Q Consensus 181 ~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~ 260 (371)
......++...++..++ .+++++++|. ++..........++....+.......... ......
T Consensus 66 ~~~~~~~~~~~~~~~~~-~~~~~~~~s~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~~~------- 127 (206)
T d1rkua_ 66 ATLKPLEGAVEFVDWLR-ERFQVVILSD---TFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------RVVGYQ------- 127 (206)
T ss_dssp TTCCCCTTHHHHHHHHH-TTSEEEEEEE---EEHHHHHHHHHHTTCCCEEEEEEEECTTS-------CEEEEE-------
T ss_pred hhccccchHHHHHHHhh-cCceEEEecc---CchHHHHHHHHHhCCchhhcceeeeeccc-------cccccc-------
Confidence 34678999999988775 6799999998 55788888888888876554332211110 000000
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcE
Q 017455 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (371)
Q Consensus 261 ~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~ 340 (371)
.+.+.. .+..++.+|.+++++++|||+.||+.|.+.||+..
T Consensus 128 -------------------------~~~~~~--------------~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gI 168 (206)
T d1rkua_ 128 -------------------------LRQKDP--------------KRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGI 168 (206)
T ss_dssp -------------------------CCSSSH--------------HHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEE
T ss_pred -------------------------ccchhh--------------HHHHHHHhcccccceEEecCCccCHHHHHhCCccE
Confidence 111111 56778999999999999999999999999999998
Q ss_pred EE
Q 017455 341 VV 342 (371)
Q Consensus 341 v~ 342 (371)
++
T Consensus 169 Am 170 (206)
T d1rkua_ 169 LF 170 (206)
T ss_dssp EE
T ss_pred EE
Confidence 88
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=98.84 E-value=7.8e-09 Score=91.57 Aligned_cols=107 Identities=10% Similarity=0.128 Sum_probs=70.0
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHH-HcCccccc-hheeecchhHHhhhhccccccccccCCchh
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVE-KLGSERIS-KIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~-~lgl~~~f-~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~ 260 (371)
..+.||+.+|++.++++|++|..+||........+...+. .+|+-... ..+++. +.
T Consensus 85 A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~--------------~~-------- 142 (209)
T d2b82a1 85 SIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFA--------------GD-------- 142 (209)
T ss_dssp CEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEEC--------------CC--------
T ss_pred cCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEee--------------CC--------
Confidence 4478999999999999999999999976554555555554 47773211 111111 11
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcE
Q 017455 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (371)
Q Consensus 261 ~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~ 340 (371)
+|+.. .+ +..++++++ .+++||..+|+.+|..+|+++
T Consensus 143 -------------------------~~~K~-----~r---------r~~Ik~y~I----~l~~GD~l~Df~aA~eagi~~ 179 (209)
T d2b82a1 143 -------------------------KPGQN-----TK---------SQWLQDKNI----RIFYGDSDNDITAARDVGARG 179 (209)
T ss_dssp -------------------------CTTCC-----CS---------HHHHHHTTE----EEEEESSHHHHHHHHHTTCEE
T ss_pred -------------------------CCCch-----HH---------HHHHHHcCe----EEEecCCHHHHhHHHHcCCCc
Confidence 01000 11 223366776 699999999999999999999
Q ss_pred EEECC-CCCCCcccc
Q 017455 341 VVMRS-RCITTLPVS 354 (371)
Q Consensus 341 v~v~~-~~~~~~~l~ 354 (371)
|-+-. ......+++
T Consensus 180 iRi~r~~~s~y~p~p 194 (209)
T d2b82a1 180 IRILRASNSTYKPLP 194 (209)
T ss_dssp EECCCCTTCSSCSCC
T ss_pred eEeeccCCCCCCCch
Confidence 99843 333333444
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=98.83 E-value=1.6e-08 Score=88.19 Aligned_cols=49 Identities=4% Similarity=0.063 Sum_probs=39.4
Q ss_pred CCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEECCC
Q 017455 294 SSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 346 (371)
Q Consensus 294 p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~ 346 (371)
|...+++.. ++..++++|++++++++|||+.||+.|++.+|+.++ +.++
T Consensus 148 ~~~~~K~~a---l~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~va-v~na 196 (230)
T d1wr8a_ 148 KPWINKGSG---IEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVA-VAQA 196 (230)
T ss_dssp CTTCCHHHH---HHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEE-CTTS
T ss_pred eCCcCcchh---hcccccccccchhheeeeecCccHHHHHHHCCeEEE-ECCC
Confidence 333444545 899999999999999999999999999999998644 4433
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.72 E-value=7.7e-09 Score=96.40 Aligned_cols=49 Identities=24% Similarity=0.480 Sum_probs=42.7
Q ss_pred HHhcCCCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccc
Q 017455 177 FLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (371)
Q Consensus 177 ~l~~~~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~ 228 (371)
.+....+.++||+.+|++.|+++|++++|+|+ +....+..+++++|+..
T Consensus 128 ~v~~~~i~Lr~G~~e~~~~l~~~~i~~~IvSg---G~~~~ie~vl~~lg~~~ 176 (291)
T d2bdua1 128 IVADSDVMLKEGYENFFGKLQQHGIPVFIFSA---GIGDVLEEVIRQAGVYH 176 (291)
T ss_dssp HHHHSCCCBCBTHHHHHHHHHHHTCCEEEEEE---EEHHHHHHHHHHTTCCB
T ss_pred HHHhcCCCcccCHHHHHHHHHHcCCeEEEEcC---ChHHHHHHHHHHcCCCc
Confidence 33334578999999999999999999999999 67999999999999863
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.69 E-value=4e-08 Score=88.39 Aligned_cols=38 Identities=13% Similarity=0.157 Sum_probs=34.7
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 305 ~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
|++.+++.++++++++++|||+.||+.|.+.+|..+++
T Consensus 201 al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am 238 (271)
T d1rkqa_ 201 GVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAV 238 (271)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred ccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEe
Confidence 48999999999999999999999999999999966544
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.50 E-value=2.5e-07 Score=83.52 Aligned_cols=38 Identities=16% Similarity=0.142 Sum_probs=34.6
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 305 ~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
|++..++++|++++++++|||+.||+.|.+.+|..+++
T Consensus 217 ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam 254 (285)
T d1nrwa_ 217 ALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAM 254 (285)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEEC
T ss_pred HHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEe
Confidence 48999999999999999999999999999999976644
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.48 E-value=1.3e-09 Score=96.49 Aligned_cols=38 Identities=13% Similarity=-0.033 Sum_probs=34.4
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 305 ~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
+++..++++|++++++++|||+.||+.+++.+|+.+++
T Consensus 155 ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav 192 (225)
T d1l6ra_ 155 AVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACP 192 (225)
T ss_dssp HHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEEC
T ss_pred HHHHHhhhhccchhheeeecCCcchHHHHHHCCeEEEE
Confidence 37889999999999999999999999999999975544
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.45 E-value=1.1e-06 Score=76.04 Aligned_cols=40 Identities=5% Similarity=0.012 Sum_probs=32.2
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEECC
Q 017455 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (371)
Q Consensus 305 ~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~ 345 (371)
++...++.+|++++++++|||+.||+.|.+.+|. .|.|.+
T Consensus 191 ~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~-~vaV~n 230 (232)
T d1xvia_ 191 WIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDY-AVIVKG 230 (232)
T ss_dssp HHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSE-EEECCC
T ss_pred HHHHHHHHcCCChhcEEEEcCCHhHHHHHHhCCe-EEEEeC
Confidence 3444445679999999999999999999999997 555543
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.33 E-value=2.2e-07 Score=82.37 Aligned_cols=38 Identities=8% Similarity=-0.031 Sum_probs=34.1
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 305 ~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
|++..++++|++++++++|||+.||+.|.+.+|..+++
T Consensus 166 a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav 203 (244)
T d1s2oa1 166 ATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIV 203 (244)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEEC
T ss_pred HHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEe
Confidence 38899999999999999999999999999999965543
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.32 E-value=3.9e-07 Score=79.78 Aligned_cols=98 Identities=19% Similarity=0.237 Sum_probs=70.1
Q ss_pred CCccHHHHHHHHHHCCCcEEEEcCCC------CCC---cHHHHHHHHHcCccccchheeecchhHHhhhhcccccccccc
Q 017455 185 LRPGVEDFVDDAYNEGIPLIVLTAYG------KSG---DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 255 (371)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~IvTn~~------~~~---~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~ 255 (371)
++|+|.+.|+.|.++|+.++|+||-+ .+. ......+++.++.... +..+ ..
T Consensus 51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~l~~~~~----i~~~-------------~~--- 110 (195)
T d1yj5a1 51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVPFQ----VLVA-------------TH--- 110 (195)
T ss_dssp SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHHHTSCCE----EEEE-------------CS---
T ss_pred ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHHcCCCcc----EEEe-------------cC---
Confidence 57999999999999999999999931 000 1223445555554311 1111 00
Q ss_pred CCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcC----CCCCcEEEEeCCH----
Q 017455 256 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE----KPVRNCFLIAGSQ---- 327 (371)
Q Consensus 256 ~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lg----v~p~e~I~IgDs~---- 327 (371)
+. ..+||.|.+ ++.+++.++ ++.++++||||..
T Consensus 111 ~~-------------------------~~RKP~~GM--------------~~~~~~~~n~~~~id~~~S~~IGD~~gr~~ 151 (195)
T d1yj5a1 111 AG-------------------------LNRKPVSGM--------------WDHLQEQANEGIPISVEDSVFVGDAAGRLA 151 (195)
T ss_dssp SS-------------------------SSSTTSTHH--------------HHHHHHTSSSSCCCCGGGCEEECSCCCBCT
T ss_pred cc-------------------------ccCCCccHH--------------HHHHHHHhcccccCCcCceEEEeCccCccc
Confidence 00 156999999 999999875 8899999999954
Q ss_pred -------------hhHHHHHHcCCcEE
Q 017455 328 -------------SGVAGAQRIGMPCV 341 (371)
Q Consensus 328 -------------~Di~aA~~aGm~~v 341 (371)
+|+..|+++|++..
T Consensus 152 ~~~~~~~~~D~S~sD~~fA~N~gikF~ 178 (195)
T d1yj5a1 152 NWAPGRKKKDFSCADRLFALNVGLPFA 178 (195)
T ss_dssp TSBTTBCSCCSCCHHHHHHHHHTCCEE
T ss_pred cccccccccCcchhHHHHHHHCCCccc
Confidence 89999999999965
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.28 E-value=6.8e-07 Score=80.39 Aligned_cols=41 Identities=15% Similarity=0.131 Sum_probs=35.7
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEECCC
Q 017455 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 346 (371)
Q Consensus 305 ~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~ 346 (371)
|++..++++|++++++++|||+.||+.|.+.+|..+ .+.++
T Consensus 194 ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sv-a~~na 234 (267)
T d1nf2a_ 194 ALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRV-AMENA 234 (267)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEE-ECTTS
T ss_pred HHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEE-EeCCC
Confidence 388999999999999999999999999999999864 44443
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.20 E-value=7.9e-07 Score=77.77 Aligned_cols=37 Identities=5% Similarity=0.042 Sum_probs=32.6
Q ss_pred HHHHHHHcC-CCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 017455 306 LRAGAEYAE-KPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (371)
Q Consensus 306 ~~~a~~~lg-v~p~e~I~IgDs~~Di~aA~~aGm~~v~ 342 (371)
+...+++++ ..++++++|||+.||+.|.+.+|..+++
T Consensus 184 l~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~ 221 (243)
T d1wzca1 184 AKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIV 221 (243)
T ss_dssp HHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEE
T ss_pred HHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCCcEEEe
Confidence 778888884 8899999999999999999999966555
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.09 E-value=5e-06 Score=68.28 Aligned_cols=44 Identities=18% Similarity=0.244 Sum_probs=39.6
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccc
Q 017455 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f 230 (371)
+++|++.+.|+.|++.|++++++|+ .....+..+-+.+|++..|
T Consensus 21 ~lr~~a~~~I~~L~~~Gi~v~ilTG---D~~~~a~~ia~~lgI~~v~ 64 (135)
T d2b8ea1 21 TLKESAKPAVQELKRMGIKVGMITG---DNWRSAEAISRELNLDLVI 64 (135)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHTCSEEE
T ss_pred CCCccHHHHHHHHHHcCCEEEEEcC---cchhhhhHHHhhhhhhhhc
Confidence 5899999999999999999999998 5588888999999998655
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.06 E-value=1.5e-06 Score=77.71 Aligned_cols=41 Identities=2% Similarity=0.029 Sum_probs=35.8
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEECCC
Q 017455 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 346 (371)
Q Consensus 305 ~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~ 346 (371)
+++..++.++++++++++|||+.||+.|.+.+|..++ +.++
T Consensus 211 ~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va-~~na 251 (283)
T d2b30a1 211 GINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFA-VANA 251 (283)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEE-CTTC
T ss_pred HHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEE-eCCC
Confidence 3889999999999999999999999999999997655 4443
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.06 E-value=3.5e-06 Score=72.64 Aligned_cols=32 Identities=13% Similarity=0.064 Sum_probs=28.5
Q ss_pred EEEeCCHhhHHHHHHcCCcEEEECCCCCCCcc
Q 017455 321 FLIAGSQSGVAGAQRIGMPCVVMRSRCITTLP 352 (371)
Q Consensus 321 I~IgDs~~Di~aA~~aGm~~v~v~~~~~~~~~ 352 (371)
++|+|++.++.++..+|+++|+...++.....
T Consensus 140 ~lIDD~p~n~~~~~~~g~~~il~~~~~N~~~~ 171 (195)
T d1q92a_ 140 LLIDDRPDITGAEPTPSWEHVLFTACHNQHLQ 171 (195)
T ss_dssp EEEESCSCCCCSCSSCSSEEEEECCTTTTTCC
T ss_pred EEecCcHHHHHHHhcCCCeEEEECCCcccCCC
Confidence 89999999999999999999999988876543
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=97.82 E-value=1.7e-05 Score=67.93 Aligned_cols=83 Identities=16% Similarity=0.103 Sum_probs=64.7
Q ss_pred HHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchheeecchhHHhhhhccccccccccCCchhHHHHHHHHHHhH
Q 017455 193 VDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSA 272 (371)
Q Consensus 193 L~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~~~~~~~f~~~v~g~~v~~~~~~~~~~~~~k~~~~ 272 (371)
|..|+..|+.++++|.. ....+......+++...+....
T Consensus 41 i~~l~~~gi~~~iis~~---~~~~v~~~~~~l~~~~~~~~~~-------------------------------------- 79 (177)
T d1k1ea_ 41 IKMLMDADIQVAVLSGR---DSPILRRRIADLGIKLFFLGKL-------------------------------------- 79 (177)
T ss_dssp HHHHHHTTCEEEEEESC---CCHHHHHHHHHHTCCEEEESCS--------------------------------------
T ss_pred HHHHhhhcEEEEEecCC---chhHHHHHHhhhcccccccccc--------------------------------------
Confidence 67788899999999994 3677888888888876443210
Q ss_pred HHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEC
Q 017455 273 QKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 344 (371)
Q Consensus 273 ~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~ 344 (371)
+.. .+++..++++|+++++|+||||..+|+.+.+.+|+.++.-+
T Consensus 80 --------------~K~--------------~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~n 123 (177)
T d1k1ea_ 80 --------------EKE--------------TACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVAD 123 (177)
T ss_dssp --------------CHH--------------HHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTT
T ss_pred --------------cHH--------------HHHHHHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEcCC
Confidence 000 02788899999999999999999999999999998766543
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=97.54 E-value=0.00013 Score=61.67 Aligned_cols=41 Identities=22% Similarity=0.342 Sum_probs=37.6
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcc
Q 017455 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~ 227 (371)
||+|++.+.|+.|++.|+++.++|+ .....+..+-+++|+.
T Consensus 20 p~R~~~~~~I~~l~~~GI~v~miTG---D~~~tA~~ia~~~Gi~ 60 (168)
T d1wpga2 20 PPRKEVMGSIQLCRDAGIRVIMITG---DNKGTAIAICRRIGIF 60 (168)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHTTSS
T ss_pred CCchhHHHHHHHHHHCcCEEEEECC---CCHHHHHHHHHHcCCC
Confidence 6899999999999999999999999 5578889999999984
|
| >d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5' nucleotidase-like domain: Cytosolic IMP-GMP specific 5'-nucleotidase species: Legionella pneumophila [TaxId: 446]
Probab=97.23 E-value=0.00024 Score=68.89 Aligned_cols=123 Identities=9% Similarity=0.026 Sum_probs=80.2
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHH-c--------CccccchheeecchhHHhhhhc------c
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-L--------GSERISKIKIVGNEEVERSLYG------Q 247 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~-l--------gl~~~f~~~i~~~~~~~~~~f~------~ 247 (371)
+..-|.+..+|..||++|-++-++|| |+-.++..++.. + .|.++||++|+.+.-= .+|. .
T Consensus 184 v~k~~~l~~~L~~lr~~GKklFLiTN---S~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~KP--~FF~~~~~~~~ 258 (458)
T d2bdea1 184 VIREKEVVEGLKHFIRYGKKIFILTN---SEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKP--RFFYDNLRFLS 258 (458)
T ss_dssp EECCHHHHHHHHHHHTTTCEEEEECS---SCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCCHH--HHHHSCCCEEE
T ss_pred hcCChhHHHHHHHHHHcCCeEEEEec---CcHHHHHHHhhhhcccCCCCCCChHHhceEEEeCCCCC--CccCCCCcceE
Confidence 33578999999999999999999999 457777766663 4 5679999988875421 1221 1
Q ss_pred ccccccccCCchhHHHHHHHHHHhHHHHHHHHHHHhhccCccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEeCCH
Q 017455 248 FVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ 327 (371)
Q Consensus 248 ~v~g~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~a~~~lgv~p~e~I~IgDs~ 327 (371)
+.+.++..... .+-.||- +|. ... .....+.+|..-.++++|||+.
T Consensus 259 v~~~~g~l~~~-----------------------~~~~~~~--vY~-gGn--------~~~l~~llg~~g~~VLY~GDhi 304 (458)
T d2bdea1 259 VNPENGTMTNV-----------------------HGPIVPG--VYQ-GGN--------AKKFTEDLGVGGDEILYIGDHI 304 (458)
T ss_dssp ECTTTCCEEEC-----------------------CSCCCSE--EEE-ECC--------HHHHHHHTTCCGGGEEEEESSC
T ss_pred EeCCCCccccC-----------------------CccccCC--ccc-cCC--------HHHHHHHhCCCCCcEEEECCcc
Confidence 11111110000 0001111 211 011 5667788899999999999997
Q ss_pred -hhHHHHH-HcCCcEEEEC
Q 017455 328 -SGVAGAQ-RIGMPCVVMR 344 (371)
Q Consensus 328 -~Di~aA~-~aGm~~v~v~ 344 (371)
.||..++ ..|+.|++|-
T Consensus 305 ~~Di~~~kk~~gWrT~~Ii 323 (458)
T d2bdea1 305 YGDILRLKKDCNWRTALVV 323 (458)
T ss_dssp CSCHHHHHHHHCSEEEEEC
T ss_pred chhhhhhhhhcCCceEEeh
Confidence 5977775 6799999986
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=96.48 E-value=0.00076 Score=59.34 Aligned_cols=40 Identities=8% Similarity=-0.046 Sum_probs=36.5
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEC
Q 017455 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 344 (371)
Q Consensus 305 ~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~ 344 (371)
|++..++++|++++++++|||+.||+.|.+.+|..+++-+
T Consensus 194 al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~N 233 (269)
T d1rlma_ 194 GISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGN 233 (269)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTT
T ss_pred HHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCC
Confidence 4889999999999999999999999999999999887643
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=96.26 E-value=0.0012 Score=58.02 Aligned_cols=41 Identities=5% Similarity=0.025 Sum_probs=36.3
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEECCC
Q 017455 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 346 (371)
Q Consensus 305 ~~~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~ 346 (371)
|++..++++|++++++++|||+.||+.|.+.+|.. |.+.++
T Consensus 190 al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~s-vav~na 230 (260)
T d2rbka1 190 GIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIG-VAMGQA 230 (260)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEE-EECTTS
T ss_pred HHHHHHHhccccHhheeEecCCcccHHHHHhCCeE-EEeCCC
Confidence 48999999999999999999999999999999995 555544
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.52 E-value=0.0033 Score=53.24 Aligned_cols=33 Identities=0% Similarity=-0.072 Sum_probs=27.2
Q ss_pred cCCCCCcEEEEeC----CHhhHHHHHHcCCcEEEECC
Q 017455 313 AEKPVRNCFLIAG----SQSGVAGAQRIGMPCVVMRS 345 (371)
Q Consensus 313 lgv~p~e~I~IgD----s~~Di~aA~~aGm~~v~v~~ 345 (371)
++.+++++++||| +.||++|.+.+|...+.+.+
T Consensus 194 ~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~ 230 (243)
T d2amya1 194 ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA 230 (243)
T ss_dssp TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSS
T ss_pred hCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCC
Confidence 4778999999999 77999999999977777764
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.29 E-value=0.033 Score=46.66 Aligned_cols=47 Identities=19% Similarity=0.221 Sum_probs=40.2
Q ss_pred CCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCccccchhe
Q 017455 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIK 233 (371)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~~~f~~~ 233 (371)
+..|||+.+||+.+.+. +.++|.|.+ ...++..+++.++....+...
T Consensus 54 v~~RP~l~eFL~~l~~~-yei~I~Ta~---~~~YA~~il~~ldp~~~~~~~ 100 (181)
T d1ta0a_ 54 VLKRPHVDEFLQRMGEL-FECVLFTAS---LAKYADPVADLLDKWGAFRAR 100 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSS---CHHHHHHHHHHHCSSCCEEEE
T ss_pred EecCCCHHHHHHHHHhc-eEEEEEcCC---cHHHHHHHHHHhccCCceeEE
Confidence 45899999999999876 999999995 489999999999887666543
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.25 E-value=0.83 Score=39.95 Aligned_cols=42 Identities=17% Similarity=0.232 Sum_probs=36.3
Q ss_pred CCCCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCcc
Q 017455 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (371)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl~ 227 (371)
.+.+.||+.++|+.+.+. ++.+|+|. +...+++.+-..+|.-
T Consensus 79 ~~~lvpgA~~~lk~l~~~-m~~yIvST---SY~qyi~al~~~~gfp 120 (308)
T d1y8aa1 79 SAKFVPDAEKAMATLQER-WTPVVIST---SYTQYLRRTASMIGVR 120 (308)
T ss_dssp HCCBCTTHHHHHHHHHTT-CEEEEEEE---EEHHHHHHHHHHTTCC
T ss_pred ceeecCCHHHHHHHHHhh-CCcEEEec---cHHHHHHHHHhhcCCC
Confidence 367999999999999876 89999998 6689999999998873
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.80 E-value=0.024 Score=47.41 Aligned_cols=38 Identities=5% Similarity=-0.097 Sum_probs=30.6
Q ss_pred HHHHHHHcCCCCCcEEEEeCC----HhhHHHHHHcCCcEEEECCC
Q 017455 306 LRAGAEYAEKPVRNCFLIAGS----QSGVAGAQRIGMPCVVMRSR 346 (371)
Q Consensus 306 ~~~a~~~lgv~p~e~I~IgDs----~~Di~aA~~aGm~~v~v~~~ 346 (371)
++..+ +.+++++++|||+ .||++|.+.+|...+.|.++
T Consensus 190 l~~L~---~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na 231 (244)
T d2fuea1 190 LDSLD---QDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSP 231 (244)
T ss_dssp HHHHT---TSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSH
T ss_pred HHHHh---cCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCH
Confidence 45444 4589999999997 49999999999878887743
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=92.11 E-value=0.032 Score=48.39 Aligned_cols=15 Identities=33% Similarity=0.580 Sum_probs=13.3
Q ss_pred eEEEEecCCcccccc
Q 017455 85 LAVLLEVDGVLVDAY 99 (371)
Q Consensus 85 kaviFD~DGTL~d~~ 99 (371)
|+|+||+||||++.+
T Consensus 2 k~if~DlDGTL~~~~ 16 (260)
T d2rbka1 2 KALFFDIDGTLVSFE 16 (260)
T ss_dssp CEEEECSBTTTBCTT
T ss_pred eEEEEECCCCCcCCC
Confidence 799999999999754
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.96 E-value=0.035 Score=46.53 Aligned_cols=31 Identities=26% Similarity=0.310 Sum_probs=21.7
Q ss_pred CceEEEEecCCccccccccCcHHHHHHHHHHc
Q 017455 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKL 114 (371)
Q Consensus 83 ~~kaviFD~DGTL~d~~~~~~~~a~~~~~~~~ 114 (371)
..|+++||+||||++.... ..+...++++++
T Consensus 2 ~~kl~~fDlDGTLl~~~~~-i~~~~~~al~~l 32 (243)
T d2amya1 2 GPALCLFDVDGTLTAPRQK-ITKEMDDFLQKL 32 (243)
T ss_dssp CSEEEEEESBTTTBCTTSC-CCHHHHHHHHHH
T ss_pred CCEEEEEcCcCCeeCCCCc-CCHHHHHHHHHH
Confidence 5789999999999986543 444445555443
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=91.01 E-value=0.067 Score=46.13 Aligned_cols=17 Identities=12% Similarity=0.403 Sum_probs=14.6
Q ss_pred ceEEEEecCCccccccc
Q 017455 84 DLAVLLEVDGVLVDAYR 100 (371)
Q Consensus 84 ~kaviFD~DGTL~d~~~ 100 (371)
+|+++||+||||++...
T Consensus 2 IKli~~DlDGTLl~~~~ 18 (269)
T d1rlma_ 2 VKVIVTDMDGTFLNDAK 18 (269)
T ss_dssp CCEEEECCCCCCSCTTS
T ss_pred EEEEEEeCCccCcCCCC
Confidence 68999999999997653
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=89.90 E-value=0.07 Score=44.21 Aligned_cols=28 Identities=7% Similarity=0.048 Sum_probs=22.7
Q ss_pred CCcEEEEeCCHhhHHHHHHcCCc-EEEEC
Q 017455 317 VRNCFLIAGSQSGVAGAQRIGMP-CVVMR 344 (371)
Q Consensus 317 p~e~I~IgDs~~Di~aA~~aGm~-~v~v~ 344 (371)
.+++++|||+.||+.|.+.+|.. +|.+.
T Consensus 170 ~~~~i~~GDs~ND~~Mf~~~~~~~av~~g 198 (229)
T d1u02a_ 170 ERPAIIAGDDATDEAAFEANDDALTIKVG 198 (229)
T ss_dssp TSCEEEEESSHHHHHHHHTTTTSEEEEES
T ss_pred cccceeecCCCChHHHHhccCCeEEEEeC
Confidence 37899999999999999999764 34444
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.12 E-value=0.088 Score=43.70 Aligned_cols=28 Identities=32% Similarity=0.364 Sum_probs=18.3
Q ss_pred EEEEecCCccccccccCcHHHHHHHHHHc
Q 017455 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKL 114 (371)
Q Consensus 86 aviFD~DGTL~d~~~~~~~~a~~~~~~~~ 114 (371)
.++||+||||++.... ..+...++++++
T Consensus 3 i~lFDlDGTLl~~~~~-is~~~~~~i~~l 30 (244)
T d2fuea1 3 LCLFDVDGTLTPARQK-IDPEVAAFLQKL 30 (244)
T ss_dssp EEEEESBTTTBSTTSC-CCHHHHHHHHHH
T ss_pred EEEEccccCccCCCCc-CCHHHHHHHHHH
Confidence 4568999999987653 434445555443
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=88.29 E-value=0.38 Score=39.40 Aligned_cols=13 Identities=38% Similarity=0.685 Sum_probs=11.4
Q ss_pred EEEEecCCccccc
Q 017455 86 AVLLEVDGVLVDA 98 (371)
Q Consensus 86 aviFD~DGTL~d~ 98 (371)
.|+||+||||++.
T Consensus 2 Li~~DlDGTL~~~ 14 (229)
T d1u02a_ 2 LIFLDYDGTLVPI 14 (229)
T ss_dssp EEEEECBTTTBCC
T ss_pred EEEEEecCCCCCC
Confidence 6899999999973
|
| >d2pjua1 c.92.3.1 (A:11-196) Propionate catabolism operon regulatory protein PrpR {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Chelatase-like superfamily: PrpR receptor domain-like family: PrpR receptor domain-like domain: Propionate catabolism operon regulatory protein PrpR species: Escherichia coli [TaxId: 562]
Probab=85.68 E-value=1.1 Score=37.18 Aligned_cols=35 Identities=11% Similarity=0.068 Sum_probs=27.4
Q ss_pred HHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCcEEEECCC
Q 017455 307 RAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 346 (371)
Q Consensus 307 ~~a~~~lgv~p~e~I~IgDs~~Di~aA~~aGm~~v~v~~~ 346 (371)
...++.-|++ ++|||+.. ...|+++||+.|++.++
T Consensus 135 v~~l~~~G~~----vVVG~~~~-~~~A~~~Gl~~vli~S~ 169 (186)
T d2pjua1 135 INELKANGTE----AVVGAGLI-TDLAEEAGMTGIFIYSA 169 (186)
T ss_dssp HHHHHHTTCC----EEEESHHH-HHHHHHTTSEEEESSCH
T ss_pred HHHHHHCCCC----EEECChHH-HHHHHHcCCCEEEEeCH
Confidence 3346677776 78999865 57889999999999765
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=84.52 E-value=0.29 Score=38.06 Aligned_cols=43 Identities=14% Similarity=-0.101 Sum_probs=30.6
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEcCCCCCCcHHHHHHHHHcCc
Q 017455 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 226 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~IvTn~~~~~~~~~~~~l~~lgl 226 (371)
+|.|++.++|+.|+++|+.|++.|+............+.+.|+
T Consensus 21 kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~~i 63 (122)
T d2obba1 21 EEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGL 63 (122)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTC
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHHcCC
Confidence 3789999999999999999999999542112233344455454
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=83.31 E-value=0.22 Score=39.03 Aligned_cols=26 Identities=19% Similarity=0.175 Sum_probs=24.0
Q ss_pred CCCccHHHHHHHHHHCCCcEEEEcCC
Q 017455 184 PLRPGVEDFVDDAYNEGIPLIVLTAY 209 (371)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~IvTn~ 209 (371)
.|.+++.++|..|++.|+++.|.|+.
T Consensus 24 ~P~~~~Ie~l~~l~~~G~~Iii~TaR 49 (124)
T d1xpja_ 24 LPRLDVIEQLREYHQLGFEIVISTAR 49 (124)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CcCHHHHHHHHHHHHCCCEEEEEecC
Confidence 37899999999999999999999995
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=83.09 E-value=0.17 Score=41.97 Aligned_cols=18 Identities=39% Similarity=0.460 Sum_probs=15.1
Q ss_pred CCceEEEEecCCcccccc
Q 017455 82 PRDLAVLLEVDGVLVDAY 99 (371)
Q Consensus 82 ~~~kaviFD~DGTL~d~~ 99 (371)
..+|++|||+||||+|..
T Consensus 3 ~~ik~~i~DvDGVlTDG~ 20 (177)
T d1k1ea_ 3 ENIKFVITDVDGVLTDGQ 20 (177)
T ss_dssp GGCCEEEEECTTTTSCSE
T ss_pred ccCeEEEEccCCcccCCe
Confidence 357999999999999853
|