Citrus Sinensis ID: 017514
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 370 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SPV4 | 359 | Salicylate O-methyltransf | N/A | no | 0.956 | 0.986 | 0.608 | 1e-130 | |
| Q9SBK6 | 392 | Jasmonate O-methyltransfe | N/A | no | 0.991 | 0.936 | 0.465 | 2e-91 | |
| Q9AR07 | 389 | Jasmonate O-methyltransfe | no | no | 0.989 | 0.940 | 0.470 | 3e-86 | |
| Q68CM3 | 365 | Probable caffeine synthas | N/A | no | 0.954 | 0.967 | 0.433 | 4e-82 | |
| Q9FYZ9 | 364 | Benzoate carboxyl methylt | N/A | no | 0.945 | 0.961 | 0.438 | 3e-81 | |
| Q9FZN8 | 369 | Caffeine synthase 1 OS=Ca | N/A | no | 0.945 | 0.948 | 0.431 | 4e-81 | |
| Q9AVK1 | 385 | Probable caffeine synthas | N/A | no | 0.962 | 0.924 | 0.405 | 1e-73 | |
| Q9AVK0 | 372 | 7-methylxanthosine syntha | N/A | no | 0.956 | 0.951 | 0.414 | 1e-73 | |
| A4GE69 | 372 | 7-methylxanthosine syntha | N/A | no | 0.956 | 0.951 | 0.414 | 2e-73 | |
| Q9AVL9 | 385 | Probable caffeine synthas | N/A | no | 0.962 | 0.924 | 0.405 | 3e-73 |
| >sp|Q9SPV4|SAMT_CLABR Salicylate O-methyltransferase OS=Clarkia breweri GN=SAMT PE=1 SV=1 | Back alignment and function desciption |
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Score = 464 bits (1195), Expect = e-130, Method: Compositional matrix adjust.
Identities = 225/370 (60%), Positives = 278/370 (75%), Gaps = 16/370 (4%)
Query: 1 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFC-STSPTKVAIADLGC 59
M+V QVLHM GG G SYA NS +Q +VISI KPITE A+T L+ T T++AIADLGC
Sbjct: 1 MDVRQVLHMKGGAGENSYAMNSFIQRQVISITKPITEAAITALYSGDTVTTRLAIADLGC 60
Query: 60 SSGPNTLLVASELIKVVNKICDKLGSQ-LPEFQVFLNDLPGNDFNTIFRSLASFQKILRK 118
SSGPN L +ELIK V ++ K+G + PE+Q+FLNDLPGNDFN IFRSL +
Sbjct: 61 SSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDV--- 117
Query: 119 QLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMA 178
G CF GVPGSFYGRLFPRN++H HSSYSL WLSQVP G+ESNKGNI+MA
Sbjct: 118 --------DGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMA 169
Query: 179 STSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELL 238
+T P VL AYY+QFQ D +LFL+CR++E+V GRMVLT LGR+S+D +S ECC IW+LL
Sbjct: 170 NTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRASTECCLIWQLL 229
Query: 239 ATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQN 298
A ALN MVSEGLIEEEK++ FNIPQYTPSP E+++E++KEGSF IDH+E SE+ W++
Sbjct: 230 AMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCT- 288
Query: 299 GFKFNEAVDAFNDGGYNVANCMRAVAEPLLVSQFGEAIIDELFKRYREIVADRMSKEKTK 358
K + + + GYNVA CMRAVAEPLL+ FGEAII+++F RY+ ++ +RMSKEKTK
Sbjct: 289 --KDGDGGGSVEEEGYNVARCMRAVAEPLLLDHFGEAIIEDVFHRYKLLIIERMSKEKTK 346
Query: 359 FINVTVSLTK 368
FINV VSL +
Sbjct: 347 FINVIVSLIR 356
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Catalyzes the methylation of the free carboxyl end of the plant hormone salicylic acid (SA). Converts SA to SA methyl ester (MSA). The volatile compound MSA is hypothesized to act as an airborne signal that triggers defense responses in uninfected plants. MSA is an important chemoattractant for moth pollinated flowering plants. Clarkia breweri (taxid: 36903) EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: nEC: 9 |
| >sp|Q9SBK6|JMT_BRARP Jasmonate O-methyltransferase OS=Brassica rapa subsp. pekinensis GN=JMT PE=1 SV=1 | Back alignment and function description |
|---|
Score = 336 bits (861), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 184/395 (46%), Positives = 247/395 (62%), Gaps = 28/395 (7%)
Query: 1 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSPT-KVAIADLGC 59
MEV+++LHMN G G TSYA NS+VQ +IS+ + + +EA+ KL S IADLGC
Sbjct: 1 MEVMRILHMNKGNGETSYAKNSIVQSNIISLGRRVMDEALKKLMIRNSEILSFGIADLGC 60
Query: 60 SSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQ 119
SSGPN+LL S +++ + +C L +PE + LNDLP NDFN IF SL F ++K+
Sbjct: 61 SSGPNSLLSISNIVETIQNLCHDLDRPVPELSLSLNDLPSNDFNYIFASLPEFYDRVKKR 120
Query: 120 ------LGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVP-------D 166
LG G+ G CF + VPGSFYGRLFPR S+H HSS SL WLSQVP D
Sbjct: 121 DNNYESLGFEHGSGGPCFVSAVPGSFYGRLFPRRSLHFVHSSSSLHWLSQVPCGEVNKKD 180
Query: 167 GLE-----SNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGR 221
G+ N+G I+++ TSP Y QFQ DFS+FL+ RSEELV GRMVL+FLGR
Sbjct: 181 GVVITADLDNRGKIYLSKTSPKSAHKVYALQFQTDFSVFLRSRSEELVPGGRMVLSFLGR 240
Query: 222 KSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSF 281
S DP+++E CY WELLA AL ++ EG+IEEE ++ FN P Y SP E+K + KEGSF
Sbjct: 241 SSPDPTTEESCYQWELLAQALMSLAKEGIIEEENIDAFNAPYYAASPEELKMAIEKEGSF 300
Query: 282 TIDHLEVSEVNWNAYQNGFKFNEAVDAFN------DGGYNVANCMRAVAEPLLVSQFGEA 335
+ID LE+S V+W + G +++ D G VA +RAV EP+L FG+
Sbjct: 301 SIDRLEISPVDW---EGGSISDDSYDIVRFKPEALASGRRVAKTIRAVVEPMLEPTFGQK 357
Query: 336 IIDELFKRYREIVADRMSKEKTKFINVTVSLTKIG 370
++DELF+RY ++V + + ++ V VSL ++G
Sbjct: 358 VMDELFERYAKLVGEYVYVSSPRYTIVIVSLLRMG 392
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Catalyzes the methylation of jasmonate into methyljasmonate, a plant volatile that acts as an important cellular regulator mediating diverse developmental processes and defense responses. Brassica rapa subsp. pekinensis (taxid: 51351) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 1 |
| >sp|Q9AR07|JMT_ARATH Jasmonate O-methyltransferase OS=Arabidopsis thaliana GN=JMT PE=1 SV=3 | Back alignment and function description |
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Score = 318 bits (816), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 185/393 (47%), Positives = 242/393 (61%), Gaps = 27/393 (6%)
Query: 1 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSP-TKVAIADLGC 59
MEV++VLHMN G G TSYA NS Q +IS+ + + +EA+ KL S S + + IADLGC
Sbjct: 1 MEVMRVLHMNKGNGETSYAKNSTAQSNIISLGRRVMDEALKKLMMSNSEISSIGIADLGC 60
Query: 60 SSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKIL--- 116
SSGPN+LL S ++ ++ +C L +PE +V LNDLP NDFN I SL F +
Sbjct: 61 SSGPNSLLSISNIVDTIHNLCPDLDRPVPELRVSLNDLPSNDFNYICASLPEFYDRVNNN 120
Query: 117 RKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVP----------- 165
++ LG G CF + VPGSFYGRLFPR S+H HSS SL WLSQVP
Sbjct: 121 KEGLGFGRGGGESCFVSAVPGSFYGRLFPRRSLHFVHSSSSLHWLSQVPCREAEKEDRTI 180
Query: 166 -DGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQ 224
LE N G I+++ TSP AY QFQ DF +FL+ RSEELV GRMVL+FLGR+S
Sbjct: 181 TADLE-NMGKIYISKTSPKSAHKAYALQFQTDFWVFLRSRSEELVPGGRMVLSFLGRRSL 239
Query: 225 DPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTID 284
DP+++E CY WELLA AL +M EG+IEEEK++ FN P Y S E+K + KEGSF+ID
Sbjct: 240 DPTTEESCYQWELLAQALMSMAKEGIIEEEKIDAFNAPYYAASSEELKMVIEKEGSFSID 299
Query: 285 HLEVSEVNWNAYQNGFKFNEAVDAFND-------GGYNVANCMRAVAEPLLVSQFGEAII 337
LE+S ++W + G E+ D G V+N +RAV EP+L FGE ++
Sbjct: 300 RLEISPIDW---EGGSISEESYDLVIRSKPEALASGRRVSNTIRAVVEPMLEPTFGENVM 356
Query: 338 DELFKRYREIVADRMSKEKTKFINVTVSLTKIG 370
DELF+RY +IV + ++ V +SL + G
Sbjct: 357 DELFERYAKIVGEYFYVSSPRYAIVILSLVRAG 389
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Catalyzes the methylation of jasmonate into methyljasmonate, a plant volatile that acts as an important cellular regulator mediating diverse developmental processes and defense responses. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 1 |
| >sp|Q68CM3|TCS2_CAMSI Probable caffeine synthase 2 OS=Camellia sinensis GN=TCS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 305 bits (781), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 163/376 (43%), Positives = 224/376 (59%), Gaps = 23/376 (6%)
Query: 2 EVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSPTKVAI--ADLGC 59
EV + L MN G G +SYA NS + V S+ P+ E A+ LF A+ DLGC
Sbjct: 3 EVKEALFMNKGEGESSYAQNSSFTQTVTSMTMPVLENAVETLFSKDFHLLQALNAVDLGC 62
Query: 60 SSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQ 119
++GP T V S + +++ K C +L Q E QV+LNDLPGNDFNT+F+ L S K++ +
Sbjct: 63 AAGPTTFTVISTIKRMMEKKCRELNCQTLELQVYLNDLPGNDFNTLFKGLPS--KVVGNK 120
Query: 120 LGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLES------NKG 173
S C+ GVPGSF+GRLFPRNS+HL HS YS+ WL+Q P GL S NKG
Sbjct: 121 CEEVS-----CYVVGVPGSFHGRLFPRNSLHLVHSCYSVHWLTQAPKGLTSKEGLALNKG 175
Query: 174 NIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCY 233
I+++ TSPP V AY QF DF++FL RS+E+V G MVL GR S DPS C+
Sbjct: 176 KIYISKTSPPVVREAYLSQFHEDFTMFLNSRSQEVVPNGCMVLILRGRLSSDPSDMGSCF 235
Query: 234 IWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNW 293
WELLA A+ +VS+GLI+E+K++ FN+P Y PS E+K V + GSFTIDH+E E++
Sbjct: 236 TWELLAVAIAELVSQGLIDEDKLDTFNVPSYFPSLEEVKDIVERNGSFTIDHMEGFELDS 295
Query: 294 NAYQNGFKFNEAVDAFNDGGYNVANCMRAVAEPLLVSQFGEAIIDELFKRYREIVADRMS 353
Q K+ G A RA EP++ +QFG I+D+L++++ IV
Sbjct: 296 PEMQENDKWVR--------GEKFATVARAFTEPIISNQFGHEIMDKLYEKFTHIVVSDFE 347
Query: 354 KEKTKFINVTVSLTKI 369
+ K ++ + L+KI
Sbjct: 348 AKIPKITSIILVLSKI 363
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May be involved in the biosynthesis of caffeine. Catalyzes the conversion of 7-methylxanthine (7mX) to theobromine and of theobromine to caffeine. Has 1-N-methylation activity. Camellia sinensis (taxid: 4442) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 6 EC: 0 |
| >sp|Q9FYZ9|BAMT_ANTMA Benzoate carboxyl methyltransferase OS=Antirrhinum majus GN=BAMT PE=1 SV=1 | Back alignment and function description |
|---|
Score = 302 bits (773), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 163/372 (43%), Positives = 236/372 (63%), Gaps = 22/372 (5%)
Query: 5 QVLHMN-GGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTS--PTKVAIADLGCSS 61
++L MN G G TSYA+NS +Q+ ++S + + +E + + P + D+GCSS
Sbjct: 6 KLLCMNIAGDGETSYANNSGLQKVMMSKSLHVLDETLKDIIGDHVGFPKCFKMMDMGCSS 65
Query: 62 GPNTLLVASELIKVVNKI-CDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL 120
GPN LLV S +I + + +K ++LPEF+VFLNDLP NDFN +F+ L
Sbjct: 66 GPNALLVMSGIINTIEDLYTEKNINELPEFEVFLNDLPDNDFNNLFKLL----------- 114
Query: 121 GSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLE-SNKGNIFMAS 179
S G CF G+PGSFYGRL P+ S+H +SSYS+ WLSQVP+GLE +N+ NI+MA+
Sbjct: 115 ---SHENGNCFVYGLPGSFYGRLLPKKSLHFAYSSYSIHWLSQVPEGLEDNNRQNIYMAT 171
Query: 180 TSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLA 239
SPP V AY +Q++RDFS FLK R EE+V GRMVLTF GR +DPSSK+ I+ LLA
Sbjct: 172 ESPPEVYKAYAKQYERDFSTFLKLRGEEIVPGGRMVLTFNGRSVEDPSSKDDLAIFTLLA 231
Query: 240 TALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQNG 299
L +MV+EGL++ + + FNIP Y+P E+++ ++ EGSFT+D LEV V W+A
Sbjct: 232 KTLVDMVAEGLVKMDDLYSFNIPIYSPCTREVEAAILSEGSFTLDRLEVFRVCWDASDYT 291
Query: 300 FKFNEAVDAF---NDGGYNVANCMRAVAEPLLVSQFGEAIIDELFKRYREIVADRMSKEK 356
++ + G VA+C+RA+ EP+L S FG I+D LF +Y + + + +S E
Sbjct: 292 DDDDQQDPSIFGKQRSGKFVADCVRAITEPMLASHFGSTIMDLLFGKYAKKIVEHLSVEN 351
Query: 357 TKFINVTVSLTK 368
+ + ++ VSL++
Sbjct: 352 SSYFSIVVSLSR 363
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Converts benzoic acid into the volatile ester methyl benzoates. This scent, mostly produced in a rhythmical, diurnal manner, attracts the pollinators. Antirrhinum majus (taxid: 4151) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q9FZN8|TCS1_CAMSI Caffeine synthase 1 OS=Camellia sinensis GN=TCS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 301 bits (772), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 163/378 (43%), Positives = 229/378 (60%), Gaps = 28/378 (7%)
Query: 2 EVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSPTK-VAIADLGCS 60
+V +VL MN G G +SYA NS ++V S+A+P E A+ LF + + ADLGC+
Sbjct: 8 KVNEVLFMNRGEGESSYAQNSSFTQQVASMAQPALENAVETLFSRDFHLQALNAADLGCA 67
Query: 61 SGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL 120
+GPNT V S + +++ K C +L Q E QV+LNDL GNDFNT+F+ L+S + +
Sbjct: 68 AGPNTFAVISTIKRMMEKKCRELNCQTLELQVYLNDLFGNDFNTLFKGLSS------EVI 121
Query: 121 GSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLES------NKGN 174
G+ C+ GVPGSF+GRLFPRNS+HL HSSYS+ WL+Q P GL S NKG
Sbjct: 122 GNKCEEV-PCYVMGVPGSFHGRLFPRNSLHLVHSSYSVHWLTQAPKGLTSREGLALNKGK 180
Query: 175 IFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYI 234
I+++ TSPP V AY QF DF++FL RS+E+V G MVL GR+ DPS + C+
Sbjct: 181 IYISKTSPPVVREAYLSQFHEDFTMFLNARSQEVVPNGCMVLILRGRQCSDPSDMQSCFT 240
Query: 235 WELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWN 294
WELLA A+ +VS+GLI+E+K++ FNIP Y S E+K V ++GSFTIDH+E
Sbjct: 241 WELLAMAIAELVSQGLIDEDKLDTFNIPSYFASLEEVKDIVERDGSFTIDHIE------- 293
Query: 295 AYQNGFKFNEAVDAFNDG---GYNVANCMRAVAEPLLVSQFGEAIIDELFKRYREIVADR 351
GF + ND G +RA EP++ +QFG I+D+L+ ++ IV
Sbjct: 294 ----GFDLDSVEMQENDKWVRGEKFTKVVRAFTEPIISNQFGPEIMDKLYDKFTHIVVSD 349
Query: 352 MSKEKTKFINVTVSLTKI 369
+ + K ++ + L+KI
Sbjct: 350 LEAKLPKTTSIILVLSKI 367
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Involved in the biosynthesis of caffeine. Catalyzes the conversion of 7-methylxanthine (7mX) to theobromine and of theobromine to caffeine. Has 3-N- and 1-N-methylation activity. Camellia sinensis (taxid: 4442) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 6 EC: 0 |
| >sp|Q9AVK1|CS3_COFAR Probable caffeine synthase 3 OS=Coffea arabica GN=CS3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 277 bits (708), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 158/390 (40%), Positives = 238/390 (61%), Gaps = 34/390 (8%)
Query: 1 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSPTK---VAIADL 57
ME+ +VLHMNGG G SYA NS + V++ KP+ E+ + +L + P + +ADL
Sbjct: 1 MELQEVLHMNGGEGDASYAKNSSFNQLVLAKVKPVLEQCVGELLRANLPNINKCIKVADL 60
Query: 58 GCSSGPNTLLVASELIKVVNKICDKLGSQL--PEFQVFLNDLPGNDFNTIFRSLASFQKI 115
GC+SGPNTLL ++++ ++K+ ++ ++L P QVFL DL NDFN++F L SF +
Sbjct: 61 GCASGPNTLLTVRDIVQSIDKVRQEMKNELERPTIQVFLTDLFQNDFNSVFMLLPSFYRK 120
Query: 116 LRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGL------E 169
L K+ G G+ C +PGSF+GRLFP S+H HSSYSLQ+LSQVP GL
Sbjct: 121 LEKENGRKIGS---CLIAAMPGSFHGRLFPEESMHFLHSSYSLQFLSQVPSGLVTELGIT 177
Query: 170 SNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFL--GRKSQDPS 227
+NK +I+ + SPP V AY +QF +DF+ FL+ RSEEL++ GRM+LT + G + P+
Sbjct: 178 ANKRSIYSSKASPPPVQKAYLDQFTKDFTTFLRIRSEELLSRGRMLLTCICKGDEFDGPN 237
Query: 228 SKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLE 287
+ +LL A+N++V EG +EEEK++ FN+P Y S E+K V +EGSF I +LE
Sbjct: 238 T------MDLLEMAINDLVVEGHLEEEKLDSFNVPIYAASVEELKCIVEEEGSFEILYLE 291
Query: 288 VSEVNWNAYQNGFKFNEAVDA------FND---GGYNVANCMRAVAEPLLVSQFGEAIID 338
++ ++A GF ++ ++D +VA+ +R+V EP+L + FGEAII
Sbjct: 292 TFKLRYDA---GFSIDDDCQVRSHSPEYSDEHARAAHVASLLRSVYEPILANHFGEAIIP 348
Query: 339 ELFKRYREIVADRMSKEKTKFINVTVSLTK 368
++F R+ A + K + N+ +SL K
Sbjct: 349 DIFHRFATNAAKVIRLGKGFYNNLIISLAK 378
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May be involved in the biosynthesis of caffeine. Coffea arabica (taxid: 13443) |
| >sp|Q9AVK0|XMT1_COFAR 7-methylxanthosine synthase 1 OS=Coffea arabica GN=XMT1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 276 bits (707), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 157/379 (41%), Positives = 231/379 (60%), Gaps = 25/379 (6%)
Query: 1 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSPTK---VAIADL 57
ME+ +VL MNGG G TSYA NS + V++ KP+ E+ + +L + P + +ADL
Sbjct: 1 MELQEVLRMNGGEGDTSYAKNSAYNQLVLAKVKPVLEQCVRELLRANLPNINKCIKVADL 60
Query: 58 GCSSGPNTLLVASELIKVVNKICDKLGSQL--PEFQVFLNDLPGNDFNTIFRSLASFQKI 115
GC+SGPNTLL ++++ ++K+ + ++L P Q+FLNDL NDFN++F+ L SF +
Sbjct: 61 GCASGPNTLLTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFPNDFNSVFKLLPSFYRK 120
Query: 116 LRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGL------E 169
L K+ G G+ C +PGSFY RLFP S+H HS Y LQWLSQVP GL
Sbjct: 121 LEKENGRKIGS---CLIGAMPGSFYSRLFPEESMHFLHSCYCLQWLSQVPSGLVTELGIS 177
Query: 170 SNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSK 229
+NKG+I+ + S V AY +QF +DF+ FL+ SEEL + GRM+LT + + + +
Sbjct: 178 TNKGSIYSSKASRLPVQKAYLDQFTKDFTTFLRIHSEELFSHGRMLLTCICKGVELDARN 237
Query: 230 ECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 289
+LL A+N++V EG +EEEK++ FN+P Y PS E+K V +EGSF I +LE
Sbjct: 238 AI----DLLEMAINDLVVEGHLEEEKLDSFNLPVYIPSAEEVKCIVEEEGSFEILYLETF 293
Query: 290 EVNWNAYQNGFKFNEAVDAFNDGGYNVANCMRAVAEPLLVSQFGEAIIDELFKRYREIVA 349
+V ++A GF ++D + VA+ +RAV EP+L S FGEAII ++F R+ + A
Sbjct: 294 KVLYDA---GF----SIDDEHIKAEYVASSVRAVYEPILASHFGEAIIPDIFHRFAKHAA 346
Query: 350 DRMSKEKTKFINVTVSLTK 368
+ K + N+ +SL K
Sbjct: 347 KVLPLGKGFYNNLIISLAK 365
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Involved in the biosynthesis of caffeine. Specific for xanthosine and could not use xanthosine 5'-monophosphate (XMP) as substrate. Catalyzes the 7-N-methylation activity of xanthosine, but does not have 1-N- or 3-N-methylation activity. Coffea arabica (taxid: 13443) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 5 EC: 8 |
| >sp|A4GE69|XMT1_COFCA 7-methylxanthosine synthase 1 OS=Coffea canephora GN=XMT1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 276 bits (705), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 157/379 (41%), Positives = 231/379 (60%), Gaps = 25/379 (6%)
Query: 1 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSPTK---VAIADL 57
ME+ +VL MNGG G TSYA NS + V++ KP+ E+ + +L + P + +ADL
Sbjct: 1 MELQEVLRMNGGEGDTSYAKNSAYNQLVLAKVKPVLEQCVRELLRANLPNINKCIKVADL 60
Query: 58 GCSSGPNTLLVASELIKVVNKICDKLGSQL--PEFQVFLNDLPGNDFNTIFRSLASFQKI 115
GC+SGPNTLL ++++ ++K+ + ++L P Q+FLNDL NDFN++F+ L SF +
Sbjct: 61 GCASGPNTLLTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFPNDFNSVFKLLPSFYRK 120
Query: 116 LRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGL------E 169
L K+ G G+ C +PGSFY RLFP S+H HS Y LQWLSQVP GL
Sbjct: 121 LEKENGRKIGS---CLIGAMPGSFYSRLFPEESMHFLHSCYCLQWLSQVPSGLVTELGIG 177
Query: 170 SNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSK 229
+NKG+I+ + S V AY +QF +DF+ FL+ SEEL + GRM+LT + + + +
Sbjct: 178 TNKGSIYSSKASRLPVQKAYLDQFTKDFTTFLRIHSEELFSHGRMLLTCICKGVELDARN 237
Query: 230 ECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 289
+LL A+N++V EG +EEEK++ FN+P Y PS E+K V +EGSF I +LE
Sbjct: 238 AI----DLLEMAINDLVVEGHLEEEKLDSFNLPVYIPSAEEVKCIVEEEGSFEILYLETF 293
Query: 290 EVNWNAYQNGFKFNEAVDAFNDGGYNVANCMRAVAEPLLVSQFGEAIIDELFKRYREIVA 349
+V ++A GF ++D + VA+ +RAV EP+L S FGEAII ++F R+ + A
Sbjct: 294 KVLYDA---GF----SIDDEHIKAEYVASSVRAVYEPILASHFGEAIIPDIFHRFAKHAA 346
Query: 350 DRMSKEKTKFINVTVSLTK 368
+ K + N+ +SL K
Sbjct: 347 KVLPLGKGFYNNLIISLAK 365
|
Involved in the biosynthesis of caffeine. Specific for xanthosine. Cannot use xanthosine 5'-monophosphate (XMP) as substrate. Directly produces 7-methylxanthine, and therefore the methyl transfer and nucleoside cleavage may be coupled. Catalyzes the 7-N-methylation of xanthosine, but does not have 1-N- or 3-N-methylation activity. Coffea canephora (taxid: 49390) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 5 EC: 8 |
| >sp|Q9AVL9|CS4_COFAR Probable caffeine synthase 4 OS=Coffea arabica GN=CS4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 275 bits (704), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 158/390 (40%), Positives = 238/390 (61%), Gaps = 34/390 (8%)
Query: 1 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSPTK---VAIADL 57
ME+ +VLHMNGG G SYA NS + V++ KP+ E+ + +L + P + +ADL
Sbjct: 1 MELQEVLHMNGGEGEASYAKNSSFNQLVLAKVKPVLEQCVRELLRANLPNINKCIKVADL 60
Query: 58 GCSSGPNTLLVASELIKVVNKICDKLGSQL--PEFQVFLNDLPGNDFNTIFRSLASFQKI 115
GC+SGPNTLL + ++ ++K+ ++ ++L P QVFL DL NDFN++F L SF +
Sbjct: 61 GCASGPNTLLTVWDTVQSIDKVKQEMKNELERPTIQVFLTDLFQNDFNSVFMLLPSFYRK 120
Query: 116 LRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGL------E 169
L K+ G G+ C +PGSF+GRLFP S+H HSSYSLQ+LSQVP GL
Sbjct: 121 LEKENGRKIGS---CLIAAMPGSFHGRLFPEESMHFLHSSYSLQFLSQVPSGLVTELGIT 177
Query: 170 SNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFL--GRKSQDPS 227
+NK +I+ + SPP V AY +QF +DF+ FL+ RSEEL++ GRM+LT + G + P+
Sbjct: 178 ANKRSIYSSKASPPPVQKAYLDQFTKDFTTFLRMRSEELLSRGRMLLTCICKGDECDGPN 237
Query: 228 SKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLE 287
+ +LL A+N++V+EG + EEK++ FN+P YT S E+K V +EGSF I +L+
Sbjct: 238 T------MDLLEMAINDLVAEGRLGEEKLDSFNVPIYTASVEEVKCMVEEEGSFEILYLQ 291
Query: 288 VSEVNWNAYQNGFKFNEAVD------AFND---GGYNVANCMRAVAEPLLVSQFGEAIID 338
++ ++A GF ++ ++D +VA+ +R+V EP+L S FGEAII
Sbjct: 292 TFKLRYDA---GFSIDDDCQVRSHSPVYSDEHARAAHVASLIRSVYEPILASHFGEAIIP 348
Query: 339 ELFKRYREIVADRMSKEKTKFINVTVSLTK 368
++F R+ A + K + N+ +SL K
Sbjct: 349 DIFHRFATNAAKVIRLGKGFYNNLIISLAK 378
|
May be involved in the biosynthesis of caffeine. Coffea arabica (taxid: 13443) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 370 | ||||||
| 224097038 | 364 | predicted protein [Populus trichocarpa] | 0.983 | 1.0 | 0.727 | 1e-153 | |
| 225430676 | 364 | PREDICTED: salicylate O-methyltransferas | 0.983 | 1.0 | 0.710 | 1e-153 | |
| 255561056 | 366 | Benzoate carboxyl methyltransferase, put | 0.983 | 0.994 | 0.693 | 1e-152 | |
| 359476667 | 364 | PREDICTED: salicylate O-methyltransferas | 0.983 | 1.0 | 0.702 | 1e-150 | |
| 359476672 | 363 | PREDICTED: salicylate O-methyltransferas | 0.981 | 1.0 | 0.705 | 1e-149 | |
| 225430680 | 363 | PREDICTED: salicylate O-methyltransferas | 0.981 | 1.0 | 0.7 | 1e-149 | |
| 440550959 | 367 | salicylic acid carboxyl methyltransferas | 0.986 | 0.994 | 0.699 | 1e-148 | |
| 255561060 | 366 | Benzoate carboxyl methyltransferase, put | 0.983 | 0.994 | 0.677 | 1e-147 | |
| 359476669 | 364 | PREDICTED: LOW QUALITY PROTEIN: salicyla | 0.983 | 1.0 | 0.689 | 1e-147 | |
| 356559353 | 370 | PREDICTED: salicylate O-methyltransferas | 0.986 | 0.986 | 0.665 | 1e-146 |
| >gi|224097038|ref|XP_002310820.1| predicted protein [Populus trichocarpa] gi|118486393|gb|ABK95036.1| unknown [Populus trichocarpa] gi|222853723|gb|EEE91270.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 269/370 (72%), Positives = 302/370 (81%), Gaps = 6/370 (1%)
Query: 1 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSPTKVAIADLGCS 60
MEV QVLHMNGG G TSYA NSLVQ KVISI I EEA+T ++C+T PT +AIADLGCS
Sbjct: 1 MEVAQVLHMNGGRGETSYAQNSLVQRKVISITMRIAEEAITNIYCNTFPTSLAIADLGCS 60
Query: 61 SGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL 120
SGPNTL SEL+KVV+++ KLG Q PE+QV LNDLPGNDFN IF+SLA FQ+ L+KQ+
Sbjct: 61 SGPNTLYAVSELVKVVDEVRRKLGHQSPEYQVLLNDLPGNDFNAIFKSLAGFQENLKKQM 120
Query: 121 GSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMAST 180
G G CFF GVPGSFY RLF S+H HSSYSL WLS+VP+GLE NKGNI+MAST
Sbjct: 121 GDGFGP---CFFAGVPGSFYCRLFRAKSLHFVHSSYSLMWLSRVPEGLEGNKGNIYMAST 177
Query: 181 SPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLAT 240
SPP VL AYY QFQ DF+LFLKCRSEELVA GRMVLT LGR+S+DPSSKECCYIWELLA
Sbjct: 178 SPPSVLKAYYMQFQTDFTLFLKCRSEELVAGGRMVLTILGRRSEDPSSKECCYIWELLAV 237
Query: 241 ALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQNGF 300
ALN MV EG+IEEEK + FNIPQYTPSP E++S+V KEGSFTID LEVS+VNWNAY N
Sbjct: 238 ALNEMVLEGIIEEEKFDSFNIPQYTPSPFEVESQVKKEGSFTIDRLEVSQVNWNAYDNEV 297
Query: 301 KFNEAVDAFNDGGYNVANCMRAVAEPLLVSQFGEAIIDELFKRYREIVADRMSKEKTKFI 360
+ A AF DGGYNVA CMRAVAEPLLVS FGEAIIDE+F RY EIVA RMSKEKT+F+
Sbjct: 298 -YQSA--AFEDGGYNVAKCMRAVAEPLLVSHFGEAIIDEVFSRYGEIVASRMSKEKTEFV 354
Query: 361 NVTVSLTKIG 370
NVTVS+T+ G
Sbjct: 355 NVTVSVTRKG 364
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225430676|ref|XP_002262676.1| PREDICTED: salicylate O-methyltransferase [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust.
Identities = 263/370 (71%), Positives = 302/370 (81%), Gaps = 6/370 (1%)
Query: 1 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSPTKVAIADLGCS 60
MEVVQVL M GG G TSYA NSLVQ+KVIS+ KPI EEA+T L+C+ PT + IADLGCS
Sbjct: 1 MEVVQVLCMKGGNGDTSYAKNSLVQKKVISLTKPIIEEAITNLYCNKFPTSLCIADLGCS 60
Query: 61 SGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL 120
SGPNTL E++ V+++ K+G QLPE QVFLNDLPGNDFNTIF+SL FQK L K++
Sbjct: 61 SGPNTLFAVLEVVTTVDRVGKKMGRQLPEIQVFLNDLPGNDFNTIFKSLPRFQKDLEKRM 120
Query: 121 GSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMAST 180
G+ A CF GVPGSFYGRLFP S+H HSSYSLQWLSQVP GLESNKGNI+MAS+
Sbjct: 121 GAG---AESCFINGVPGSFYGRLFPSKSLHFIHSSYSLQWLSQVPQGLESNKGNIYMASS 177
Query: 181 SPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLAT 240
SPPCVL YYEQF+ DFS+FL+CRSEEL+ G MVLTFLGR+S+DPSSKECCYIWELLA
Sbjct: 178 SPPCVLKVYYEQFRTDFSMFLRCRSEELLEGGSMVLTFLGRRSEDPSSKECCYIWELLAV 237
Query: 241 ALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQNGF 300
ALN+MV+EGLIEEEK++ FNIPQYTPSPAE+K EV KEGSFTI LEVSEVNWNAY F
Sbjct: 238 ALNDMVAEGLIEEEKMDSFNIPQYTPSPAEVKCEVEKEGSFTISKLEVSEVNWNAYHGEF 297
Query: 301 KFNEAVDAFNDGGYNVANCMRAVAEPLLVSQFGEAIIDELFKRYREIVADRMSKEKTKFI 360
DA DGGYNVA MRAVAEPLLVS FG+ II+E+F RY++IVADRMS+EKT+F+
Sbjct: 298 C---PSDAHKDGGYNVAKLMRAVAEPLLVSHFGDGIIEEVFSRYQKIVADRMSREKTEFV 354
Query: 361 NVTVSLTKIG 370
NVTVS+TK G
Sbjct: 355 NVTVSMTKRG 364
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255561056|ref|XP_002521540.1| Benzoate carboxyl methyltransferase, putative [Ricinus communis] gi|223539218|gb|EEF40811.1| Benzoate carboxyl methyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 258/372 (69%), Positives = 301/372 (80%), Gaps = 8/372 (2%)
Query: 1 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSPTKVAIADLGCS 60
MEV QVLHMNGG+G TSYA NSLVQ+KVIS+ KPITEEAMT L+CS SP ++IAD+GCS
Sbjct: 1 MEVGQVLHMNGGMGDTSYAQNSLVQQKVISMTKPITEEAMTNLYCSISPKSLSIADMGCS 60
Query: 61 SGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL 120
SGPN+L SELI+ V IC KLG Q PE+QVFLNDLPGNDFNTIFRSL F++ + KQ+
Sbjct: 61 SGPNSLFAVSELIRAVETICGKLGHQSPEYQVFLNDLPGNDFNTIFRSLTGFKEQVEKQV 120
Query: 121 GSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMAST 180
+ G CFF+GVPGSFYGRLFP ++H HSSYSLQWLSQVPDG+E N GNI+MAS
Sbjct: 121 ---EVSVGPCFFSGVPGSFYGRLFPSKALHFVHSSYSLQWLSQVPDGIEGNDGNIYMASD 177
Query: 181 SPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLAT 240
SPP VL AYY QFQ+DFS+FLKCRSEELV GRMVLTFLGR+S+DP+SKECCYIW+LLA
Sbjct: 178 SPPSVLQAYYRQFQKDFSMFLKCRSEELVPGGRMVLTFLGRRSEDPASKECCYIWKLLAM 237
Query: 241 ALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQNGF 300
L +V EG+I++EK FNIPQYTPSP E+++ + KEGSF+ID LEVSEVNWNAY N F
Sbjct: 238 VLGELVLEGVIDKEKFESFNIPQYTPSPFEVRTGIAKEGSFSIDRLEVSEVNWNAYHNEF 297
Query: 301 KFNEAVDAFNDGGYNVANCMRAVAEPLLVSQ--FGEAIIDELFKRYREIVADRMSKEKTK 358
+E AF DGG+NV CMRAVAEPLLV FG A ID++F RYR IVADRM+KEKT+
Sbjct: 298 NMSE---AFKDGGHNVTKCMRAVAEPLLVGHFGFGRATIDQVFCRYRSIVADRMAKEKTE 354
Query: 359 FINVTVSLTKIG 370
F+NVTVS+TK G
Sbjct: 355 FVNVTVSMTKTG 366
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359476667|ref|XP_002262759.2| PREDICTED: salicylate O-methyltransferase [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 536 bits (1381), Expect = e-150, Method: Compositional matrix adjust.
Identities = 260/370 (70%), Positives = 302/370 (81%), Gaps = 6/370 (1%)
Query: 1 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSPTKVAIADLGCS 60
MEVVQVL M GG G TSYA NSL+Q+KVIS+ KPIT+EA++ LFC+ P ++ IADLGCS
Sbjct: 1 MEVVQVLCMKGGNGDTSYAQNSLLQKKVISLTKPITDEAISNLFCNNFPARLCIADLGCS 60
Query: 61 SGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL 120
SGPNTL E + V+K+ K+G +LPE QVFLNDLPGNDFNTIF+SL +FQK L+K +
Sbjct: 61 SGPNTLFAVLEFVTTVDKVHKKMGHELPEIQVFLNDLPGNDFNTIFKSLPTFQKDLQKTM 120
Query: 121 GSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMAST 180
G+ A CF TGVPGSFYGRLF S+H HSSYSLQWLSQVP GLESNKGNI+MAS+
Sbjct: 121 GAG---AESCFVTGVPGSFYGRLFLGKSLHFVHSSYSLQWLSQVPRGLESNKGNIYMASS 177
Query: 181 SPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLAT 240
SPP VL AYYEQFQ DFS+FL+CRSEEL+ G MVLTFLGR S+DPSSKECCYIWELLA
Sbjct: 178 SPPSVLKAYYEQFQTDFSMFLRCRSEELLEGGSMVLTFLGRISEDPSSKECCYIWELLAV 237
Query: 241 ALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQNGF 300
ALN+MV+EGL+EEEK++ FNIPQYTPSPAE+K EV KEGSFTI+ LE SEVNWNAY F
Sbjct: 238 ALNDMVAEGLVEEEKMDSFNIPQYTPSPAEVKCEVEKEGSFTINRLEASEVNWNAYHGEF 297
Query: 301 KFNEAVDAFNDGGYNVANCMRAVAEPLLVSQFGEAIIDELFKRYREIVADRMSKEKTKFI 360
DA DGGYNVA MRAVAEPLLVS FG+ II+E+F RY++IVADRMS+EKT+F+
Sbjct: 298 C---PSDAHEDGGYNVAKLMRAVAEPLLVSYFGDGIIEEVFSRYQKIVADRMSREKTEFV 354
Query: 361 NVTVSLTKIG 370
NVTVS+TK G
Sbjct: 355 NVTVSMTKRG 364
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359476672|ref|XP_002263123.2| PREDICTED: salicylate O-methyltransferase-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 261/370 (70%), Positives = 300/370 (81%), Gaps = 7/370 (1%)
Query: 1 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSPTKVAIADLGCS 60
MEV QVL M GG G TSYA NSLVQ+KVIS+ KPI E+A+T L+C+ P + IADLGCS
Sbjct: 1 MEVAQVLCMKGGNGDTSYAKNSLVQKKVISLTKPIIEDAITNLYCNNFPASLCIADLGCS 60
Query: 61 SGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL 120
SGPNT E++ V+K+ K+G QLPE QVFLNDLPGNDFNTIF+SL FQK L+K +
Sbjct: 61 SGPNTFFAVLEVVTTVDKVGKKMGRQLPEIQVFLNDLPGNDFNTIFKSLPKFQKDLQKTM 120
Query: 121 GSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMAST 180
G+ A CF TGVPGSFYGRLFP S+H HSSYSLQWLSQVP GLE NKGNI+MAS+
Sbjct: 121 GAG---AESCFVTGVPGSFYGRLFPSKSLHFVHSSYSLQWLSQVPRGLE-NKGNIYMASS 176
Query: 181 SPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLAT 240
SPP VL AYYEQFQ DFS+FL+CRSEEL+ G MVLTFLGR+S+DPSSKECCYIWELLA
Sbjct: 177 SPPSVLKAYYEQFQSDFSMFLRCRSEELLGGGTMVLTFLGRRSEDPSSKECCYIWELLAV 236
Query: 241 ALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQNGF 300
ALN+MVSEGLI+EEK++ FNIPQYTPSPAE+K EV KEGSFTI+ LEVSEVNWNAY F
Sbjct: 237 ALNDMVSEGLIDEEKMDSFNIPQYTPSPAEVKCEVEKEGSFTINRLEVSEVNWNAYHGEF 296
Query: 301 KFNEAVDAFNDGGYNVANCMRAVAEPLLVSQFGEAIIDELFKRYREIVADRMSKEKTKFI 360
DA DGGYNVA MRAVAEPLLVS FG+ II+E+F RY++IVADRMS+EKT+F+
Sbjct: 297 C---PSDAHKDGGYNVAKLMRAVAEPLLVSHFGDGIIEEVFCRYKKIVADRMSREKTEFV 353
Query: 361 NVTVSLTKIG 370
NVTVS+TK G
Sbjct: 354 NVTVSMTKRG 363
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225430680|ref|XP_002263018.1| PREDICTED: salicylate O-methyltransferase [Vitis vinifera] gi|297735110|emb|CBI17472.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 532 bits (1371), Expect = e-149, Method: Compositional matrix adjust.
Identities = 259/370 (70%), Positives = 299/370 (80%), Gaps = 7/370 (1%)
Query: 1 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSPTKVAIADLGCS 60
MEV QVL M GG G TSYA NSLVQ+KVIS+ KPI E+A+T L+C+ P + IADLGCS
Sbjct: 1 MEVAQVLCMKGGNGDTSYAENSLVQKKVISLTKPIIEDAITNLYCNNFPASLCIADLGCS 60
Query: 61 SGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL 120
SGPNT E++ V+K+ K+G QLPE QVFLNDLPGNDFNTIF+SL FQK L+K +
Sbjct: 61 SGPNTFFAVLEVVTTVDKVGKKMGRQLPEIQVFLNDLPGNDFNTIFKSLPKFQKDLQKTM 120
Query: 121 GSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMAST 180
G+ A CF TGVPGSFY RLFP S+H HSSYSLQWLSQVP GLE NKGNI+MAS+
Sbjct: 121 GAG---AESCFVTGVPGSFYCRLFPSKSLHFVHSSYSLQWLSQVPRGLE-NKGNIYMASS 176
Query: 181 SPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLAT 240
SPP VL AYYEQFQ DFS+FL+CRSEEL+ G MVLTFLGR+S+DPSSKECCYIWELLA
Sbjct: 177 SPPSVLKAYYEQFQSDFSMFLRCRSEELLGGGTMVLTFLGRRSEDPSSKECCYIWELLAV 236
Query: 241 ALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQNGF 300
ALN+MVSEGLI+EEK++ FNIPQYTPSPAE+K EV KEGSFTI+ LEVSEVNWNAY F
Sbjct: 237 ALNDMVSEGLIDEEKMDSFNIPQYTPSPAEVKCEVEKEGSFTINRLEVSEVNWNAYHGEF 296
Query: 301 KFNEAVDAFNDGGYNVANCMRAVAEPLLVSQFGEAIIDELFKRYREIVADRMSKEKTKFI 360
DA DGGYNVA MRAVAEPLLVS FG+ II+E+F RY++IVADRM++EKT+F+
Sbjct: 297 C---PSDAHKDGGYNVAKLMRAVAEPLLVSHFGDGIIEEVFSRYKKIVADRMTREKTEFV 353
Query: 361 NVTVSLTKIG 370
NVTVS+TK G
Sbjct: 354 NVTVSMTKRG 363
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|440550959|gb|AGC11863.1| salicylic acid carboxyl methyltransferase [Camellia japonica] | Back alignment and taxonomy information |
|---|
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 258/369 (69%), Positives = 298/369 (80%), Gaps = 4/369 (1%)
Query: 1 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSPTKVAIADLGCS 60
MEV+QVLHMNGG+G TSYASNSLVQ+KVIS+ KPIT+EA+ L+CST+P + IADLGCS
Sbjct: 1 MEVIQVLHMNGGIGETSYASNSLVQKKVISLTKPITKEAIVDLYCSTNPMTLCIADLGCS 60
Query: 61 SGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL 120
SGPNT LV SEL++ V+ C KLG Q PEFQV+LNDLPGNDFNTIF+ L SF + +R Q+
Sbjct: 61 SGPNTFLVVSELMETVHNTCQKLGHQTPEFQVYLNDLPGNDFNTIFKCLPSFHEKMRNQM 120
Query: 121 GSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESN-KGNIFMAS 179
G G CF TGVPGSFY RLFP S+H HSSYSL WLSQVPDGLESN KGNI+MAS
Sbjct: 121 GLG---LGPCFVTGVPGSFYARLFPTKSLHFVHSSYSLMWLSQVPDGLESNNKGNIYMAS 177
Query: 180 TSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLA 239
+S VL AYY QFQ DFS FLKCRSEELV+ GRMVLT LGR+S DPSSKECCYIWELLA
Sbjct: 178 SSSKEVLKAYYHQFQIDFSEFLKCRSEELVSGGRMVLTILGRESDDPSSKECCYIWELLA 237
Query: 240 TALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQNG 299
ALN MVSEGLIEEEK++ FNIPQYTPSPAE+KSEV KEGSF+ID LEVS V+WNA +
Sbjct: 238 MALNQMVSEGLIEEEKMDSFNIPQYTPSPAEVKSEVQKEGSFSIDRLEVSRVDWNACKTE 297
Query: 300 FKFNEAVDAFNDGGYNVANCMRAVAEPLLVSQFGEAIIDELFKRYREIVADRMSKEKTKF 359
+ F + GY+VA CMRAVAE LLVS FG IIDE+F+RY++IV DRM+KE+T+F
Sbjct: 298 LCPSSTDQEFKEDGYDVAKCMRAVAESLLVSHFGVEIIDEVFERYKKIVTDRMAKERTEF 357
Query: 360 INVTVSLTK 368
NVTVS+T+
Sbjct: 358 FNVTVSMTR 366
|
Source: Camellia japonica Species: Camellia japonica Genus: Camellia Family: Theaceae Order: Ericales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255561060|ref|XP_002521542.1| Benzoate carboxyl methyltransferase, putative [Ricinus communis] gi|223539220|gb|EEF40813.1| Benzoate carboxyl methyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 252/372 (67%), Positives = 297/372 (79%), Gaps = 8/372 (2%)
Query: 1 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSPTKVAIADLGCS 60
MEV QVLHMNGG G TSYA NSL+Q+KVIS+ KPITEEAMT L+CS SP + IADLGCS
Sbjct: 1 MEVGQVLHMNGGTGETSYAQNSLLQQKVISMTKPITEEAMTNLYCSISPKSLLIADLGCS 60
Query: 61 SGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL 120
SGPNTL SELI+VV +C KLG Q PE+QVFLNDLPGNDFNTIFRSL F++ + ++
Sbjct: 61 SGPNTLFAVSELIRVVETVCGKLGHQSPEYQVFLNDLPGNDFNTIFRSLTGFKEKMEER- 119
Query: 121 GSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMAST 180
+ G CFFTGVPGSFYGRLFP ++H +SSY L WLSQVP+GLE NKGNI+MAS
Sbjct: 120 --TKVSVGPCFFTGVPGSFYGRLFPSKTLHFVYSSYCLHWLSQVPEGLEDNKGNIYMASA 177
Query: 181 SPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLAT 240
SPP VL AYY QFQ+DFS+FLKCRS+ELVA GRMVLTFLGR+S+DP+SKECCYIWELLA
Sbjct: 178 SPPSVLKAYYRQFQKDFSMFLKCRSQELVAGGRMVLTFLGRRSEDPTSKECCYIWELLAM 237
Query: 241 ALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQNGF 300
ALN +V EGLI++EK + FNIP+YTPSP E+KS++ EGSF ID LEVSEV+WNAY+N
Sbjct: 238 ALNELVLEGLIDKEKFDSFNIPKYTPSPFEVKSQIEAEGSFAIDCLEVSEVSWNAYENEV 297
Query: 301 KFNEAVDAFNDGGYNVANCMRAVAEPLLVSQFG--EAIIDELFKRYREIVADRMSKEKTK 358
DA DGG+NVA C+RAVAEPLL+ FG I D++F RYR I+ DRM+KEKT
Sbjct: 298 NIP---DACKDGGHNVAKCIRAVAEPLLIGHFGFDRVITDQVFNRYRLIITDRMAKEKTN 354
Query: 359 FINVTVSLTKIG 370
F+N+TVS+TK G
Sbjct: 355 FVNITVSMTKTG 366
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359476669|ref|XP_003631877.1| PREDICTED: LOW QUALITY PROTEIN: salicylate O-methyltransferase-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 526 bits (1355), Expect = e-147, Method: Compositional matrix adjust.
Identities = 255/370 (68%), Positives = 297/370 (80%), Gaps = 6/370 (1%)
Query: 1 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSPTKVAIADLGCS 60
MEV QVL M GG G TSYA NSLV +KVIS+ KPI E+A+T L+C+ P + IADLGCS
Sbjct: 1 MEVAQVLCMKGGNGDTSYAKNSLVXKKVISLTKPIIEDAITNLYCNNFPASLCIADLGCS 60
Query: 61 SGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL 120
S P+T E++ V+K+ K+G QLPE QVFLNDLPGNDFNTIF+SL FQK L+K +
Sbjct: 61 SXPDTFFAVLEVVTTVDKVGKKMGHQLPEIQVFLNDLPGNDFNTIFKSLPKFQKDLQKTM 120
Query: 121 GSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMAST 180
G+ A CF TGVPGSFYGRLFP S+H HSSYSLQWLSQVP GLESNKGNI+MAS
Sbjct: 121 GAG---AESCFVTGVPGSFYGRLFPSKSLHFVHSSYSLQWLSQVPRGLESNKGNIYMASW 177
Query: 181 SPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLAT 240
SPP VL AYYEQFQ DFS+FL+CRSEEL+ G +VLTFLGR+S+DPSSKECCYIWELLA
Sbjct: 178 SPPSVLKAYYEQFQGDFSMFLRCRSEELLGGGTVVLTFLGRRSEDPSSKECCYIWELLAV 237
Query: 241 ALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQNGF 300
ALN+MVSEGLI+EEK++ FNIPQYTPSPAE+K EV KEGS+TI+ LEVSEVNWNAY F
Sbjct: 238 ALNDMVSEGLIDEEKMDSFNIPQYTPSPAEVKCEVEKEGSYTINRLEVSEVNWNAYHGEF 297
Query: 301 KFNEAVDAFNDGGYNVANCMRAVAEPLLVSQFGEAIIDELFKRYREIVADRMSKEKTKFI 360
DA DGGYNVA MRAVAEPLLVS FG+ II+E+F RY++IVADRM++EKT+F+
Sbjct: 298 C---PSDAHKDGGYNVAKLMRAVAEPLLVSHFGDGIIEEVFGRYKKIVADRMTREKTEFV 354
Query: 361 NVTVSLTKIG 370
NVTV +TK G
Sbjct: 355 NVTVFMTKRG 364
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356559353|ref|XP_003547964.1| PREDICTED: salicylate O-methyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 523 bits (1347), Expect = e-146, Method: Compositional matrix adjust.
Identities = 247/371 (66%), Positives = 307/371 (82%), Gaps = 6/371 (1%)
Query: 1 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSPTKVAIADLGCS 60
M+V VLHMNGGVG SYA+NSLVQ+KVI + KPI EEA+T L+C+T P +A+ADLGCS
Sbjct: 1 MKVAHVLHMNGGVGHASYANNSLVQQKVICLTKPIREEAITSLYCNTVPRSLAVADLGCS 60
Query: 61 SGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL 120
SGPNTLLV SE IK+V K+C +L + PE++VFLNDLPGNDFN IF+SL SF++ LR ++
Sbjct: 61 SGPNTLLVVSEFIKIVEKLCRELNHKSPEYKVFLNDLPGNDFNNIFKSLDSFKEKLRDEM 120
Query: 121 GSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMAST 180
S G C+F GVPGSFYGR+FP S+H HSSYSLQWLS+VP+G+++N+GN+++ ST
Sbjct: 121 ESR---IGPCYFYGVPGSFYGRVFPNQSLHFVHSSYSLQWLSKVPEGVDNNRGNVYIGST 177
Query: 181 SPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLAT 240
SP V AYYEQFQRDFSLFLKCR+EELV G MVLTFLGR+S DPSSK+ YIWEL+AT
Sbjct: 178 SPTNVARAYYEQFQRDFSLFLKCRAEELVKGGCMVLTFLGRRSDDPSSKDGGYIWELMAT 237
Query: 241 ALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQ--N 298
ALN+MV +G+I+EE+++ FNIPQYTPSP+E+K EV+KEGSF I+ LEVSEVNW+A+ N
Sbjct: 238 ALNDMVLQGIIKEEQLDTFNIPQYTPSPSEVKLEVLKEGSFAINRLEVSEVNWDAFDDWN 297
Query: 299 GFKF-NEAVDAFNDGGYNVANCMRAVAEPLLVSQFGEAIIDELFKRYREIVADRMSKEKT 357
+F +E D+ +DGGYNVA CMRAVAEP+LVS FGEAII+E+F RY++I+ADRMSKEKT
Sbjct: 298 ALEFESERADSLSDGGYNVAQCMRAVAEPMLVSHFGEAIIEEVFSRYQQILADRMSKEKT 357
Query: 358 KFINVTVSLTK 368
KF NVT+ LTK
Sbjct: 358 KFTNVTILLTK 368
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 370 | ||||||
| TAIR|locus:2013149 | 389 | JMT "jasmonic acid carboxyl me | 0.997 | 0.948 | 0.471 | 1e-84 | |
| TAIR|locus:2080747 | 379 | BSMT1 [Arabidopsis thaliana (t | 0.940 | 0.918 | 0.456 | 2e-81 | |
| TAIR|locus:2154845 | 354 | AT5G66430 [Arabidopsis thalian | 0.940 | 0.983 | 0.430 | 1.3e-77 | |
| TAIR|locus:2179929 | 415 | NAMT1 [Arabidopsis thaliana (t | 0.951 | 0.848 | 0.455 | 2.7e-77 | |
| TAIR|locus:2144466 | 368 | AT5G38020 [Arabidopsis thalian | 0.964 | 0.970 | 0.431 | 2.1e-75 | |
| TAIR|locus:2179969 | 385 | AT5G04380 "AT5G04380" [Arabido | 0.945 | 0.909 | 0.436 | 4.6e-73 | |
| TAIR|locus:2095572 | 368 | AT3G21950 [Arabidopsis thalian | 0.964 | 0.970 | 0.417 | 5.9e-73 | |
| TAIR|locus:2115400 | 371 | AT4G36470 [Arabidopsis thalian | 0.948 | 0.946 | 0.444 | 1.1e-71 | |
| TAIR|locus:2053458 | 359 | AT2G14060 [Arabidopsis thalian | 0.954 | 0.983 | 0.397 | 3.1e-67 | |
| TAIR|locus:2161680 | 386 | IAMT1 "AT5G55250" [Arabidopsis | 0.956 | 0.917 | 0.366 | 3.2e-49 |
| TAIR|locus:2013149 JMT "jasmonic acid carboxyl methyltransferase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 848 (303.6 bits), Expect = 1.0e-84, P = 1.0e-84
Identities = 184/390 (47%), Positives = 241/390 (61%)
Query: 1 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSP-TKVAIADLGC 59
MEV++VLHMN G G TSYA NS Q +IS+ + + +EA+ KL S S + + IADLGC
Sbjct: 1 MEVMRVLHMNKGNGETSYAKNSTAQSNIISLGRRVMDEALKKLMMSNSEISSIGIADLGC 60
Query: 60 SSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKIL--- 116
SSGPN+LL S ++ ++ +C L +PE +V LNDLP NDFN I SL F +
Sbjct: 61 SSGPNSLLSISNIVDTIHNLCPDLDRPVPELRVSLNDLPSNDFNYICASLPEFYDRVNNN 120
Query: 117 RKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVP-------D--- 166
++ LG G CF + VPGSFYGRLFPR S+H HSS SL WLSQVP D
Sbjct: 121 KEGLGFGRGGGESCFVSAVPGSFYGRLFPRRSLHFVHSSSSLHWLSQVPCREAEKEDRTI 180
Query: 167 --GLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQ 224
LE N G I+++ TSP AY QFQ DF +FL+ RSEELV GRMVL+FLGR+S
Sbjct: 181 TADLE-NMGKIYISKTSPKSAHKAYALQFQTDFWVFLRSRSEELVPGGRMVLSFLGRRSL 239
Query: 225 DPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTID 284
DP+++E CY WELLA AL +M EG+IEEEK++ FN P Y S E+K + KEGSF+ID
Sbjct: 240 DPTTEESCYQWELLAQALMSMAKEGIIEEEKIDAFNAPYYAASSEELKMVIEKEGSFSID 299
Query: 285 HLEVSEVNWNAYQNGFKFNEAVDAFND----GGYNVANCMRAVAEPLLVSQFGEAIIDEL 340
LE+S ++W + + V G V+N +RAV EP+L FGE ++DEL
Sbjct: 300 RLEISPIDWEGGSISEESYDLVIRSKPEALASGRRVSNTIRAVVEPMLEPTFGENVMDEL 359
Query: 341 FKRYREIVADRMSKEKTKFINVTVSLTKIG 370
F+RY +IV + ++ V +SL + G
Sbjct: 360 FERYAKIVGEYFYVSSPRYAIVILSLVRAG 389
|
|
| TAIR|locus:2080747 BSMT1 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 817 (292.7 bits), Expect = 2.0e-81, P = 2.0e-81
Identities = 169/370 (45%), Positives = 238/370 (64%)
Query: 4 VQVLHMNGGVGGTSYASNSLVQEKVISIAKPI----TEEAMTKLFCSTSPTKVAIADLGC 59
V+ L M+GG G SY++NS +Q+KV+S+AKP+ TEE M L PT + +A+LGC
Sbjct: 26 VKALCMSGGDGANSYSANSRLQKKVLSMAKPVLVRNTEEMMMNL---DFPTYIKVAELGC 82
Query: 60 SSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQ 119
SSG N+ L E+I +N +C + PE LNDLP NDFNT F+ + F K L
Sbjct: 83 SSGQNSFLAIFEIINTINVLCQHVNKNSPEIDCCLNDLPENDFNTTFKFVPFFNKEL--M 140
Query: 120 LGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMAS 179
+ + S CF G PGSFY RLF RNS+HL HSSY+L WLS+VP+ LE+NKGN+++ S
Sbjct: 141 ITNKSS----CFVYGAPGSFYSRLFSRNSLHLIHSSYALHWLSKVPEKLENNKGNLYITS 196
Query: 180 TSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKS-QDPSSKECCYIWELL 238
+SP AY QFQ+DF++FL+ RSEE+V+ GRMVLTF+GR + DP ++CC+ W LL
Sbjct: 197 SSPQSAYKAYLNQFQKDFTMFLRLRSEEIVSNGRMVLTFIGRNTLNDPLYRDCCHFWTLL 256
Query: 239 ATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQN 298
+ +L ++V EGL+ E K++ FN+P Y P+ E+K + KEGSF E++E+ + +
Sbjct: 257 SNSLRDLVFEGLVSESKLDAFNMPFYDPNVQELKEVIQKEGSF-----EINELESHGFDL 311
Query: 299 GFKFNEAVDAFNDGGYNVANCMRAVAEPLLVSQFGEAIIDELFKRYREIVADRMSKEKTK 358
G + E D F + G N AN +RAV+EP+L++ FGE IID LF +Y V +
Sbjct: 312 GHYYEE--DDF-EAGRNEANGIRAVSEPMLIAHFGEEIIDTLFDKYAYHVTQHANCRNKT 368
Query: 359 FINVTVSLTK 368
+++ VSLTK
Sbjct: 369 TVSLVVSLTK 378
|
|
| TAIR|locus:2154845 AT5G66430 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 781 (280.0 bits), Expect = 1.3e-77, P = 1.3e-77
Identities = 157/365 (43%), Positives = 229/365 (62%)
Query: 9 MNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTS-PTKVAIADLGCSSGPNTLL 67
M+GG G SY++NSL+Q+KV+S AKP+ + + + + P + +ADLGC++G NT L
Sbjct: 1 MSGGDGDNSYSTNSLLQKKVLSKAKPVLVKNTKGMMINLNFPNYIKVADLGCATGENTFL 60
Query: 68 VASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILR-KQLGSASGA 126
+E++ +N +C + + PE LNDLP NDFNT F+ + F K ++ K+L
Sbjct: 61 TMAEIVNTINVLCQQCNQKPPEIDCCLNDLPDNDFNTTFKFVPFFNKRVKSKRL------ 114
Query: 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVL 186
CF +GVPGSFY RLFPR S+H HSSYSL WLS+VP GLE N ++++ ++SPP
Sbjct: 115 ---CFVSGVPGSFYSRLFPRKSLHFVHSSYSLHWLSKVPKGLEKNSSSVYITTSSPPNAY 171
Query: 187 TAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKS-QDPSSKECCYIWELLATALNNM 245
AY QFQ DF FL+ RSEE+V+ GRMVLTF+GRK+ DP ++CC+ W LL+T+L ++
Sbjct: 172 KAYLNQFQSDFKSFLEMRSEEMVSNGRMVLTFIGRKTLDDPLHRDCCHFWTLLSTSLRDL 231
Query: 246 VSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS--EVNWNAYQNGFKFN 303
V EGL+ KV+ FNIP Y PS E+ + EGSF I+ LE+ E+ + + + +
Sbjct: 232 VYEGLVSASKVDSFNIPFYDPSKEEVMEMIRNEGSFEINDLEIHGFELGLSNHDEDYMLH 291
Query: 304 EAVDAFNDGGYNVANCMRAVAEPLLVSQFGEAIIDELFKRYREIVADRMSKEKTKFINVT 363
+ + G ANC+RAV+E +LV+ FG I+D LFK++ V+ S + +
Sbjct: 292 SQI---SKAGQREANCIRAVSESMLVADFGVDIMDTLFKKFAYHVSQHASCTNKTTVTLV 348
Query: 364 VSLTK 368
VSL +
Sbjct: 349 VSLIR 353
|
|
| TAIR|locus:2179929 NAMT1 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 778 (278.9 bits), Expect = 2.7e-77, P = 2.7e-77
Identities = 167/367 (45%), Positives = 224/367 (61%)
Query: 4 VQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTS-PTKVAIADLGCSSG 62
V L M GG G SY+SNSL+Q +V+S AKP+ + L + + PT + +ADLGCSSG
Sbjct: 55 VSPLCMRGGDGYNSYSSNSLLQRRVLSKAKPVLVKNTKDLMINLNFPTYIKVADLGCSSG 114
Query: 63 PNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGS 122
NT L SE+I +N C + PE LNDLP NDFNT F+ + F G
Sbjct: 115 QNTFLAMSEIINTINVFCQQRNQNPPEIDCCLNDLPSNDFNTTFKFIQFFN-------GM 167
Query: 123 ASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSP 182
+ F GVPGSFY RLFPR S+H HSSY L WLS+VP+GLE NK ++++ ++SP
Sbjct: 168 NITSKESYFVYGVPGSFYSRLFPRRSLHFVHSSYGLHWLSKVPEGLEKNKMSVYITNSSP 227
Query: 183 PCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQD-PSSKECCYIWELLATA 241
AY QFQRDF+ FLK RSEE+V+ GRMVLTF+GR + D P ++CC+ W LL+ +
Sbjct: 228 LSTYKAYLNQFQRDFATFLKLRSEEMVSNGRMVLTFIGRNTIDNPLHRDCCHFWTLLSKS 287
Query: 242 LNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQNGFK 301
L ++V+EGL+ KV+ F +P Y P+ EIK V KEGSF I LE + Y G
Sbjct: 288 LRDLVAEGLVSASKVDSFYLPFYDPNEKEIKEMVQKEGSFEIRDLET-----HGYDLGH- 341
Query: 302 FNEAVDAFNDGGYNVANCMRAVAEPLLVSQFGEAIIDELFKRYREIVADRMSKEKTKFIN 361
N+ + G N AN +RAV+EPLL + FG+AII+ LF ++ V+ +S ++
Sbjct: 342 CNQDESKRSKSGQNEANYIRAVSEPLLAAHFGDAIINILFNKFACHVSQHVSCRNKTTVS 401
Query: 362 VTVSLTK 368
+ VSLTK
Sbjct: 402 IVVSLTK 408
|
|
| TAIR|locus:2144466 AT5G38020 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
Identities = 160/371 (43%), Positives = 229/371 (61%)
Query: 6 VLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTS-PTKVAIADLGCSSGPN 64
VL M GG G SYA+NS Q+++ S AKP+ E + ++ T P + +ADLGCSSG N
Sbjct: 3 VLSMKGGDGEHSYANNSEGQKRLASDAKPVVVETVKEMIVKTDFPGCIKVADLGCSSGEN 62
Query: 65 TLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSAS 124
TLLV SE++ + + G LPE LNDLP NDFNT F+ + +F K+L+ +
Sbjct: 63 TLLVMSEIVNTIITSYQQKGKNLPEINCCLNDLPDNDFNTTFKLVPAFHKLLKMDV---- 118
Query: 125 GAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPC 184
G+CF +GVPGSFY RLFP S+H HSS L WLS+VPDGLE NK N+++ S PP
Sbjct: 119 --KGKCFISGVPGSFYSRLFPSKSLHFVHSSLCLHWLSKVPDGLEDNKKNVYLRSPCPPN 176
Query: 185 VLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNN 244
V +Y QF+ DFSLFL+ R++E V GRM LTF+GRKS DP SK+C W ++ +L +
Sbjct: 177 VYKSYLTQFKNDFSLFLRLRADETVPNGRMALTFVGRKSLDPLSKDCFQNWSSISDSLLD 236
Query: 245 MVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQNG-FKFN 303
+VSEG+++E V+ FN+P Y P +E++ + EGSF I + E +Y+ G +
Sbjct: 237 LVSEGIVKESDVDSFNLPFYNPDESEVREVIESEGSFKISNFETIFGLLFSYKTGRTEVK 296
Query: 304 EAVDAFNDG-GYNV----ANCMRAVAEPLLVSQFGEAIIDELFKRYREIVADRMSKEKTK 358
+ D + + V A+ +R++ EP+L + FG+AI+D LF+RY +A+R + K
Sbjct: 297 DDDDNLDQSCRFEVIRKRASIIRSITEPMLGAHFGDAIMDRLFERYTYHLAERYDTLRNK 356
Query: 359 -FINVTVSLTK 368
+ VSLT+
Sbjct: 357 PTVQFFVSLTR 367
|
|
| TAIR|locus:2179969 AT5G04380 "AT5G04380" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 738 (264.8 bits), Expect = 4.6e-73, P = 4.6e-73
Identities = 162/371 (43%), Positives = 222/371 (59%)
Query: 4 VQVLHMNGGVGGTSYASNSLVQEKVISIAKPI----TEEAMTKLFCSTSPTKVAIADLGC 59
V L MNGG SY + SL+Q++V+SI PI TEE +T L P + +ADLGC
Sbjct: 29 VGALCMNGGDVDNSYTTKSLLQKRVLSITNPILVKNTEEMLTNL---DFPKCIKVADLGC 85
Query: 60 SSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQ 119
SSG NT L SE++ +N +C K PE LNDLP NDFNT F+ + F K L
Sbjct: 86 SSGQNTFLAMSEIVNTINVLCQKWNQSRPEIDCCLNDLPTNDFNTTFKFITFFNKKLTSN 145
Query: 120 LGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMAS 179
G CF +GVPGSFY RLFPR S+H +S YS+ +LS+VPDGLE NK ++++ S
Sbjct: 146 --------GSCFVSGVPGSFYSRLFPRKSLHFIYSIYSIHFLSKVPDGLEKNKMSVYITS 197
Query: 180 TSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQD-PSSKECCYIWELL 238
+SP AY QF+RDF+ FL+ RSEE+V GRMVLT +GR + D P ++CC+ W LL
Sbjct: 198 SSPLSEYKAYLNQFKRDFTTFLRMRSEEMVHNGRMVLTLIGRNTLDNPLYRDCCHCWTLL 257
Query: 239 ATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQN 298
+ +L ++V EGL+ KV F +P Y P+ E+K + EGSF I+ LE+ E + +
Sbjct: 258 SNSLRDLVFEGLLSASKVYSFKMPFYDPNEEEVKEIIRNEGSFQINDLEMHEFDLGHSKE 317
Query: 299 GFKFNEAVDAFNDGGYNVANCMRAVAEPLLVSQFGEAIIDELFKRYREIVADRMS-KEKT 357
++ A G A+C+RAV E +LV+ FG+ IID LF +Y V+ S + KT
Sbjct: 318 KCSL-QSHKA--KAGQKEASCIRAVTETMLVAHFGDDIIDALFHKYAHHVSQHASCRVKT 374
Query: 358 KFINVTVSLTK 368
+ + VSL +
Sbjct: 375 S-VTLIVSLVR 384
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| TAIR|locus:2095572 AT3G21950 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 737 (264.5 bits), Expect = 5.9e-73, P = 5.9e-73
Identities = 155/371 (41%), Positives = 223/371 (60%)
Query: 6 VLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTS-PTKVAIADLGCSSGPN 64
V+ M GG G SYA+NS Q+ + S AKP +++ ++ P + +ADLGCSSG N
Sbjct: 3 VVSMKGGDGEHSYANNSEAQKSITSDAKPEVMKSVNEMIVKMDFPGCIKVADLGCSSGEN 62
Query: 65 TLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSAS 124
T LV SE++ + + G LPE LNDLP NDFNT F+ + SF + L+ +
Sbjct: 63 TFLVMSEIVNTIITTYQQNGQNLPEIDCCLNDLPENDFNTTFKLIPSFHEKLKMNV---- 118
Query: 125 GAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPC 184
G C+ +G PGSFY RLFP S+H HSS+ L WLS+VPDGLE NK N+++ S PP
Sbjct: 119 --KGNCYVSGCPGSFYTRLFPSKSLHFVHSSFCLHWLSKVPDGLEENKKNVYLRSPCPPN 176
Query: 185 VLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNN 244
+ +Y+ QF++DFS+FL+ R+EE + GRM LT +GRK+ DP SKEC W L++ +L +
Sbjct: 177 LYESYWNQFKKDFSMFLRMRAEETMPSGRMALTLVGRKTLDPLSKECFKDWSLVSDSLLD 236
Query: 245 MVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQNGFKF-- 302
+VSEG+++E + FN+P Y+P +E+K + EGSF I + E +Y+ G
Sbjct: 237 LVSEGVVKESDLESFNLPYYSPDESEVKEVIENEGSFEIKNFETIFGLLFSYKTGHSEVK 296
Query: 303 NEAVDAFNDGGYNV----ANCMRAVAEPLLVSQFGEAIIDELFKRYREIVADRMSKEKTK 358
++ D + + V AN R++ EP+LV+ FGEAIID LF +Y R + K
Sbjct: 297 DDDDDVDHSRRFEVVKTRANMTRSIIEPMLVAHFGEAIIDRLFDKYIYHACQRYDTLRNK 356
Query: 359 -FINVTVSLTK 368
+N VSLT+
Sbjct: 357 PTVNFFVSLTR 367
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| TAIR|locus:2115400 AT4G36470 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 725 (260.3 bits), Expect = 1.1e-71, P = 1.1e-71
Identities = 164/369 (44%), Positives = 223/369 (60%)
Query: 8 HMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLL 67
+M GG G TSYA NS +Q+K AK IT E + +L+ T P + IADLGCSSGPNTL
Sbjct: 11 YMTGGDGKTSYARNSSLQKKASDTAKHITLETLQQLYKETRPKSLGIADLGCSSGPNTLS 70
Query: 68 VASELIKVVNKICDK-LGSQ-LPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASG 125
++ IK V + + Q LPEF +FLNDLPGNDFN IF+SL F L++ + +G
Sbjct: 71 TITDFIKTVQVAHHREIPIQPLPEFSIFLNDLPGNDFNFIFKSLPDFHIELKRD--NNNG 128
Query: 126 AAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVP------DGLESNKGNIFMAS 179
F PGSFYGRLFP N++H ++S+SL WLS+VP G NKG + + S
Sbjct: 129 DCPSVFIAAYPGSFYGRLFPENTIHFVYASHSLHWLSKVPTALYDEQGKSINKGCVSICS 188
Query: 180 TSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLA 239
S V AY QF+ DFS+FL+CRS+E+V+ GRMVL LGR+ D + + WELL+
Sbjct: 189 LSSEAVSKAYCSQFKEDFSIFLRCRSKEMVSAGRMVLIILGREGPDHVDRGNSFFWELLS 248
Query: 240 TALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQNG 299
++ ++V++G EEEK++ +++ Y PS EI+ EV KEGSF ++ LE+ EV +
Sbjct: 249 RSIADLVAQGETEEEKLDSYDMHFYAPSADEIEGEVDKEGSFELERLEMLEVKKD----- 303
Query: 300 FKFNEAVDAFNDGGYNVANCMRAVAEPLLVSQFGEAIIDELFKRYREIVADRMSKEKTKF 359
K N D G VA +RAV E +LV FGE I+D+LF Y +V D ++KE +
Sbjct: 304 -KGNTEGDI--SYGKAVAKTVRAVQESMLVQHFGEKILDKLFDTYCRMVDDELAKEDIRP 360
Query: 360 INVTVSLTK 368
I V L K
Sbjct: 361 ITFVVVLRK 369
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| TAIR|locus:2053458 AT2G14060 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
Identities = 145/365 (39%), Positives = 214/365 (58%)
Query: 9 MNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTS-PTKVAIADLGCSSGPNTLL 67
M GG G SYA+NS Q V +P+ E + ++ P + +ADLGCS+G NT+L
Sbjct: 1 MKGGTGDHSYATNSHYQRSVFYEIQPLVIENVREMLLKNGFPGCIKVADLGCSTGQNTVL 60
Query: 68 VASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAA 127
S + + + ++ PE +LNDLP NDFNT F+ SFQ+ L+ ++
Sbjct: 61 AMSAIAYTIMESYQQMSKNPPEIDCYLNDLPENDFNTTFKLFHSFQEKLKPEV------K 114
Query: 128 GQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLT 187
G+ F +GVPGSFY RLFPR S+H HS++S+ WLS++PDGLESN +I + P V
Sbjct: 115 GKWFVSGVPGSFYSRLFPRKSLHFVHSAFSIHWLSRIPDGLESNTKSIHIKYPYPSNVYK 174
Query: 188 AYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVS 247
+Y QF+ DFSLFLK RSEE+V G MVLTF+GRK D SK+C +W LL+ L ++ S
Sbjct: 175 SYLNQFKIDFSLFLKMRSEEVVHNGHMVLTFVGRKVSDTLSKDCFQVWSLLSDCLLDLAS 234
Query: 248 EGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQNGFKFNEAVD 307
EG + + V FN+P Y P+ E++ ++KEGSF I +E + + Y+ + +
Sbjct: 235 EGFVNDSMVKSFNMPFYNPNEEEVREFILKEGSFEITKIEKFD-HVVPYKIDREEEDEEQ 293
Query: 308 AFN-DGGYNVANCMRAVAEPLLVSQFGEAIIDELFKRYREIVADRMS---KEKTKFINVT 363
+ + G A+ R + EPLLV+ FG+AII+ +F +Y +A +S + + +
Sbjct: 294 SLQLEAGIKHASWARCITEPLLVAHFGDAIIEPVFNKYAHYMAKYLSVSNHRRNMTLVIV 353
Query: 364 VSLTK 368
VSLT+
Sbjct: 354 VSLTR 358
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| TAIR|locus:2161680 IAMT1 "AT5G55250" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 141/385 (36%), Positives = 197/385 (51%)
Query: 1 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTK--LFCSTSPTKVAIADLG 58
M++ ++L M GG G SYA+NS Q + EE + L S SP DLG
Sbjct: 13 MKLERLLSMKGGKGQDSYANNSQAQAMHARSMLHLLEETLENVHLNSSASPPPFTAVDLG 72
Query: 59 CSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASF-QKILR 117
CSSG NT+ + ++K ++K D G PEF F +DLP NDFNT+F+ L
Sbjct: 73 CSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCM 132
Query: 118 KQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLES------N 171
++ +A G F GVPGSFY RLFP ++ FHS++SL WLSQVP+ + N
Sbjct: 133 EECLAADGNRSY-FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYN 191
Query: 172 KGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKEC 231
+G +F+ TAY QFQ D + FL+ R+ E+ G M L LGR S DP+ +
Sbjct: 192 RGRVFIHGAGEKTT-TAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRTSVDPTDQGG 250
Query: 232 CYIWELLAT----ALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLE 287
+ L T A +++V EGL+ EK + FNIP Y PS + K V GSF ID L
Sbjct: 251 AGL--LFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAIDKLV 308
Query: 288 VSEVNWNAYQNGFKF--NEAVDAFNDGGYNVANCMRAVAEPLLVSQFGEAIIDELFKRYR 345
V Y+ G NE DA G ++C R+VA L+ + GE + ++LF R
Sbjct: 309 V-------YKGGSPLVVNEPDDASEVGRAFASSC-RSVAGVLVEAHIGEELSNKLFSRV- 359
Query: 346 EIVADRMSKE---KTKFINVTVSLT 367
E A +K+ +F ++ SL+
Sbjct: 360 ESRATSHAKDVLVNLQFFHIVASLS 384
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9SPV4 | SAMT_CLABR | 2, ., 1, ., 1, ., n, 9 | 0.6081 | 0.9567 | 0.9860 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.1.1 | 0.921 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | eugene3.00071131 | SubName- Full=Putative uncharacterized protein; (365 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 370 | |||
| pfam03492 | 331 | pfam03492, Methyltransf_7, SAM dependent carboxyl | 1e-161 | |
| PLN02668 | 386 | PLN02668, PLN02668, indole-3-acetate carboxyl meth | 3e-72 |
| >gnl|CDD|217591 pfam03492, Methyltransf_7, SAM dependent carboxyl methyltransferase | Back alignment and domain information |
|---|
Score = 455 bits (1172), Expect = e-161
Identities = 178/345 (51%), Positives = 223/345 (64%), Gaps = 25/345 (7%)
Query: 36 TEEAMTKLFC-STSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLG-SQLPEFQVF 93
EEA+++L + P + IADLGCSSGPNT L S +I V K K + PEFQVF
Sbjct: 1 LEEAISELLLRNLFPNSIKIADLGCSSGPNTFLAVSNIIDTVEKKYQKENILEPPEFQVF 60
Query: 94 LNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFH 153
NDLP NDFNT+F+ L FQK R F +GVPGSFYGRLFPRNS+H H
Sbjct: 61 FNDLPSNDFNTLFKLLPPFQKKKRS-----------YFVSGVPGSFYGRLFPRNSLHFVH 109
Query: 154 SSYSLQWLSQVPDGLES------NKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207
SSYSL WLSQVP GLE NKGNI+++ SP V AY +QF++DFSLFL+ R+EE
Sbjct: 110 SSYSLHWLSQVPKGLEDKESPAWNKGNIYISGASPEEVYKAYLDQFKKDFSLFLRARAEE 169
Query: 208 LVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPS 267
LV+ G MVLTFLGR S DPS EC W+LL ALN++VSEGLIEEEK++ FNIP Y PS
Sbjct: 170 LVSGGLMVLTFLGRPSVDPSETECGIFWDLLGDALNDLVSEGLIEEEKLDSFNIPIYAPS 229
Query: 268 PAEIKSEVIKEGSFTIDHLEVSEVNWNAYQNGFKFNEAVDAFNDGGYNVANCMRAVAEPL 327
P E+K + KEGSFTI+ LE+ + + + G VA+ +RAV EP+
Sbjct: 230 PEEVKEIIEKEGSFTIERLEIIKHPNGEVPWD---ESDSEDKVEDGRFVASSVRAVVEPM 286
Query: 328 LVSQFGEAIIDELFKRYREIVADRMSKEK---TKFINVTVSLTKI 369
LV+ FGE I+D+LF RY + +++ +SKE K INV VSL++
Sbjct: 287 LVAHFGEDIMDKLFDRYAKKLSEHLSKELQNAKKTINVVVSLSRK 331
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This family of plant methyltransferases contains enzymes that act on a variety of substrates including salicylic acid, jasmonic acid and 7-Methylxanthine. Caffeine is synthesised through sequential three-step methylation of xanthine derivatives at positions 7-N, 3-N, and 1-N. The protein 7-methylxanthine methyltransferase (designated as CaMXMT) catalyzes the second step to produce theobromine. Length = 331 |
| >gnl|CDD|178273 PLN02668, PLN02668, indole-3-acetate carboxyl methyltransferase | Back alignment and domain information |
|---|
Score = 229 bits (586), Expect = 3e-72
Identities = 145/386 (37%), Positives = 206/386 (53%), Gaps = 33/386 (8%)
Query: 1 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSPTK-VAIADLGC 59
M++ ++L M GG G SYA+NS Q + EE + + ++SP DLGC
Sbjct: 13 MKLEKLLCMKGGKGEGSYANNSQAQALHARSMLHLLEETLDNVHLNSSPEVPFTAVDLGC 72
Query: 60 SSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFR---SLASFQKIL 116
SSG NT+ + ++K ++K + G PEF F +DLP NDFNT+F+ LA++ +
Sbjct: 73 SSGSNTIHIIDVIVKHMSKRYESAGLDPPEFSAFFSDLPSNDFNTLFQLLPPLANYGGSM 132
Query: 117 RKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLES------ 170
+ L A+ F GVPGSFY RLFP S+ +FHS++SL WLSQVP+ +
Sbjct: 133 EECL--AASGHRSYFAAGVPGSFYRRLFPARSIDVFHSAFSLHWLSQVPESVTDKRSAAY 190
Query: 171 NKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKE 230
NKG +F+ S AY QFQ D + FL+ R++E+ G M L LGR S DP+ +
Sbjct: 191 NKGRVFIHGASES-TANAYKRQFQADLAGFLRARAQEMKRGGAMFLVCLGRTSVDPTDQG 249
Query: 231 CCYIWELLAT----ALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHL 286
+ L T A +++V EGL+ EK + FNIP Y PS + K V GSF ID L
Sbjct: 250 GAGL--LFGTHFQDAWDDLVQEGLVTSEKRDSFNIPVYAPSLQDFKEVVEANGSFAIDKL 307
Query: 287 EVSEVNWNAYQNG--FKFNEAVDAFNDGGYNVANCMRAVAEPLLVSQFGEAIIDELFKRY 344
EV ++ G NE DA + G +AN R+VA L+ + GE + +ELF R
Sbjct: 308 EV-------FKGGSPLVVNEPDDA-AEVGRAMANSCRSVAGVLVDAHIGEELSNELFLRV 359
Query: 345 REIVADRMSK---EKTKFINVTVSLT 367
E A +K EK +F ++ SL+
Sbjct: 360 -ERRATSHAKELLEKLQFFHIVASLS 384
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Length = 386 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 370 | |||
| PLN02668 | 386 | indole-3-acetate carboxyl methyltransferase | 100.0 | |
| PF03492 | 334 | Methyltransf_7: SAM dependent carboxyl methyltrans | 100.0 | |
| PRK01683 | 258 | trans-aconitate 2-methyltransferase; Provisional | 99.48 | |
| PRK14103 | 255 | trans-aconitate 2-methyltransferase; Provisional | 99.46 | |
| TIGR02072 | 240 | BioC biotin biosynthesis protein BioC. This enzyme | 99.19 | |
| PRK10258 | 251 | biotin biosynthesis protein BioC; Provisional | 99.13 | |
| TIGR00740 | 239 | methyltransferase, putative. A simple BLAST search | 98.83 | |
| TIGR02752 | 231 | MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me | 98.8 | |
| PTZ00098 | 263 | phosphoethanolamine N-methyltransferase; Provision | 98.76 | |
| PLN02336 | 475 | phosphoethanolamine N-methyltransferase | 98.71 | |
| PLN02233 | 261 | ubiquinone biosynthesis methyltransferase | 98.68 | |
| PRK15068 | 322 | tRNA mo(5)U34 methyltransferase; Provisional | 98.67 | |
| PLN02244 | 340 | tocopherol O-methyltransferase | 98.67 | |
| PRK11036 | 255 | putative S-adenosyl-L-methionine-dependent methylt | 98.66 | |
| PRK08317 | 241 | hypothetical protein; Provisional | 98.65 | |
| COG4106 | 257 | Tam Trans-aconitate methyltransferase [General fun | 98.64 | |
| PRK00216 | 239 | ubiE ubiquinone/menaquinone biosynthesis methyltra | 98.62 | |
| PF13489 | 161 | Methyltransf_23: Methyltransferase domain; PDB: 3J | 98.61 | |
| PLN02396 | 322 | hexaprenyldihydroxybenzoate methyltransferase | 98.55 | |
| PRK15451 | 247 | tRNA cmo(5)U34 methyltransferase; Provisional | 98.54 | |
| PRK06202 | 232 | hypothetical protein; Provisional | 98.53 | |
| COG2226 | 238 | UbiE Methylase involved in ubiquinone/menaquinone | 98.52 | |
| PF08241 | 95 | Methyltransf_11: Methyltransferase domain; InterPr | 98.52 | |
| PRK11705 | 383 | cyclopropane fatty acyl phospholipid synthase; Pro | 98.48 | |
| TIGR00452 | 314 | methyltransferase, putative. Known examples to dat | 98.45 | |
| PLN02490 | 340 | MPBQ/MSBQ methyltransferase | 98.45 | |
| smart00828 | 224 | PKS_MT Methyltransferase in polyketide synthase (P | 98.44 | |
| TIGR01934 | 223 | MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis | 98.42 | |
| PRK11207 | 197 | tellurite resistance protein TehB; Provisional | 98.42 | |
| PF01209 | 233 | Ubie_methyltran: ubiE/COQ5 methyltransferase famil | 98.37 | |
| PRK12335 | 287 | tellurite resistance protein TehB; Provisional | 98.27 | |
| TIGR00477 | 195 | tehB tellurite resistance protein TehB. Part of a | 98.18 | |
| TIGR02716 | 306 | C20_methyl_CrtF C-20 methyltransferase BchU. Membe | 98.18 | |
| PF02353 | 273 | CMAS: Mycolic acid cyclopropane synthetase; InterP | 98.14 | |
| TIGR02021 | 219 | BchM-ChlM magnesium protoporphyrin O-methyltransfe | 98.05 | |
| PRK11873 | 272 | arsM arsenite S-adenosylmethyltransferase; Reviewe | 98.04 | |
| PF12847 | 112 | Methyltransf_18: Methyltransferase domain; PDB: 3G | 98.03 | |
| PRK06922 | 677 | hypothetical protein; Provisional | 98.02 | |
| PF13847 | 152 | Methyltransf_31: Methyltransferase domain; PDB: 3T | 97.99 | |
| TIGR02081 | 194 | metW methionine biosynthesis protein MetW. This pr | 97.99 | |
| PF03848 | 192 | TehB: Tellurite resistance protein TehB; InterPro: | 97.95 | |
| TIGR03438 | 301 | probable methyltransferase. This model represents | 97.94 | |
| PRK07580 | 230 | Mg-protoporphyrin IX methyl transferase; Validated | 97.93 | |
| smart00138 | 264 | MeTrc Methyltransferase, chemotaxis proteins. Meth | 97.91 | |
| PRK00121 | 202 | trmB tRNA (guanine-N(7)-)-methyltransferase; Revie | 97.9 | |
| PF08242 | 99 | Methyltransf_12: Methyltransferase domain; InterPr | 97.89 | |
| PLN02336 | 475 | phosphoethanolamine N-methyltransferase | 97.88 | |
| KOG2361 | 264 | consensus Predicted methyltransferase [General fun | 97.86 | |
| KOG3010 | 261 | consensus Methyltransferase [General function pred | 97.86 | |
| TIGR01983 | 224 | UbiG ubiquinone biosynthesis O-methyltransferase. | 97.8 | |
| PRK05785 | 226 | hypothetical protein; Provisional | 97.76 | |
| COG2230 | 283 | Cfa Cyclopropane fatty acid synthase and related m | 97.74 | |
| TIGR00138 | 181 | gidB 16S rRNA methyltransferase GidB. GidB (glucos | 97.69 | |
| KOG1540 | 296 | consensus Ubiquinone biosynthesis methyltransferas | 97.67 | |
| PRK11088 | 272 | rrmA 23S rRNA methyltransferase A; Provisional | 97.65 | |
| KOG2940 | 325 | consensus Predicted methyltransferase [General fun | 97.62 | |
| PRK05134 | 233 | bifunctional 3-demethylubiquinone-9 3-methyltransf | 97.58 | |
| PRK09489 | 342 | rsmC 16S ribosomal RNA m2G1207 methyltransferase; | 97.56 | |
| PF13649 | 101 | Methyltransf_25: Methyltransferase domain; PDB: 3B | 97.53 | |
| PF08003 | 315 | Methyltransf_9: Protein of unknown function (DUF16 | 97.52 | |
| PRK15001 | 378 | SAM-dependent 23S ribosomal RNA mG1835 methyltrans | 97.51 | |
| TIGR03840 | 213 | TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d | 97.47 | |
| KOG1541 | 270 | consensus Predicted protein carboxyl methylase [Ge | 97.46 | |
| TIGR03587 | 204 | Pse_Me-ase pseudaminic acid biosynthesis-associate | 97.46 | |
| TIGR02469 | 124 | CbiT precorrin-6Y C5,15-methyltransferase (decarbo | 97.44 | |
| PLN02585 | 315 | magnesium protoporphyrin IX methyltransferase | 97.44 | |
| TIGR00091 | 194 | tRNA (guanine-N(7)-)-methyltransferase. In E. coli | 97.44 | |
| PRK11188 | 209 | rrmJ 23S rRNA methyltransferase J; Provisional | 97.43 | |
| TIGR00537 | 179 | hemK_rel_arch HemK-related putative methylase. The | 97.4 | |
| PF05401 | 201 | NodS: Nodulation protein S (NodS); InterPro: IPR00 | 97.38 | |
| KOG1270 | 282 | consensus Methyltransferases [Coenzyme transport a | 97.35 | |
| PRK13255 | 218 | thiopurine S-methyltransferase; Reviewed | 97.32 | |
| PF00891 | 241 | Methyltransf_2: O-methyltransferase; InterPro: IPR | 97.29 | |
| cd02440 | 107 | AdoMet_MTases S-adenosylmethionine-dependent methy | 97.28 | |
| PF05175 | 170 | MTS: Methyltransferase small domain; InterPro: IPR | 97.19 | |
| PRK08287 | 187 | cobalt-precorrin-6Y C(15)-methyltransferase; Valid | 97.17 | |
| PF06080 | 204 | DUF938: Protein of unknown function (DUF938); Inte | 97.15 | |
| PRK00107 | 187 | gidB 16S rRNA methyltransferase GidB; Reviewed | 97.08 | |
| TIGR03533 | 284 | L3_gln_methyl protein-(glutamine-N5) methyltransfe | 97.07 | |
| PLN02232 | 160 | ubiquinone biosynthesis methyltransferase | 97.01 | |
| COG4123 | 248 | Predicted O-methyltransferase [General function pr | 96.99 | |
| PRK14121 | 390 | tRNA (guanine-N(7)-)-methyltransferase; Provisiona | 96.96 | |
| TIGR03534 | 251 | RF_mod_PrmC protein-(glutamine-N5) methyltransfera | 96.94 | |
| TIGR00080 | 215 | pimt protein-L-isoaspartate(D-aspartate) O-methylt | 96.91 | |
| PRK13944 | 205 | protein-L-isoaspartate O-methyltransferase; Provis | 96.91 | |
| PRK04266 | 226 | fibrillarin; Provisional | 96.84 | |
| PRK14967 | 223 | putative methyltransferase; Provisional | 96.83 | |
| PF03141 | 506 | Methyltransf_29: Putative S-adenosyl-L-methionine- | 96.77 | |
| PRK11805 | 307 | N5-glutamine S-adenosyl-L-methionine-dependent met | 96.73 | |
| KOG3178 | 342 | consensus Hydroxyindole-O-methyltransferase and re | 96.73 | |
| PF07021 | 193 | MetW: Methionine biosynthesis protein MetW; InterP | 96.69 | |
| PTZ00146 | 293 | fibrillarin; Provisional | 96.61 | |
| PRK13942 | 212 | protein-L-isoaspartate O-methyltransferase; Provis | 96.56 | |
| PRK01544 | 506 | bifunctional N5-glutamine S-adenosyl-L-methionine- | 96.55 | |
| PHA03411 | 279 | putative methyltransferase; Provisional | 96.54 | |
| PRK00312 | 212 | pcm protein-L-isoaspartate O-methyltransferase; Re | 96.53 | |
| COG2242 | 187 | CobL Precorrin-6B methylase 2 [Coenzyme metabolism | 96.47 | |
| COG2227 | 243 | UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- | 96.4 | |
| PF13659 | 117 | Methyltransf_26: Methyltransferase domain; PDB: 3G | 96.37 | |
| PF05891 | 218 | Methyltransf_PK: AdoMet dependent proline di-methy | 96.32 | |
| PRK14968 | 188 | putative methyltransferase; Provisional | 96.28 | |
| TIGR00438 | 188 | rrmJ cell division protein FtsJ. | 96.23 | |
| PLN03075 | 296 | nicotianamine synthase; Provisional | 96.21 | |
| PF05148 | 219 | Methyltransf_8: Hypothetical methyltransferase; In | 96.2 | |
| TIGR00536 | 284 | hemK_fam HemK family putative methylases. The gene | 96.13 | |
| PRK09328 | 275 | N5-glutamine S-adenosyl-L-methionine-dependent met | 96.12 | |
| PF03291 | 331 | Pox_MCEL: mRNA capping enzyme; InterPro: IPR004971 | 96.1 | |
| PRK14966 | 423 | unknown domain/N5-glutamine S-adenosyl-L-methionin | 96.08 | |
| TIGR00406 | 288 | prmA ribosomal protein L11 methyltransferase. Ribo | 96.05 | |
| KOG2904 | 328 | consensus Predicted methyltransferase [General fun | 95.98 | |
| PRK00377 | 198 | cbiT cobalt-precorrin-6Y C(15)-methyltransferase; | 95.9 | |
| TIGR00563 | 426 | rsmB ribosomal RNA small subunit methyltransferase | 95.89 | |
| COG2890 | 280 | HemK Methylase of polypeptide chain release factor | 95.82 | |
| COG2813 | 300 | RsmC 16S RNA G1207 methylase RsmC [Translation, ri | 95.75 | |
| KOG3045 | 325 | consensus Predicted RNA methylase involved in rRNA | 95.75 | |
| PRK10901 | 427 | 16S rRNA methyltransferase B; Provisional | 95.73 | |
| PRK14904 | 445 | 16S rRNA methyltransferase B; Provisional | 95.63 | |
| TIGR03704 | 251 | PrmC_rel_meth putative protein-(glutamine-N5) meth | 95.51 | |
| KOG4300 | 252 | consensus Predicted methyltransferase [General fun | 95.43 | |
| PRK14903 | 431 | 16S rRNA methyltransferase B; Provisional | 95.24 | |
| PRK00811 | 283 | spermidine synthase; Provisional | 94.64 | |
| PF02390 | 195 | Methyltransf_4: Putative methyltransferase ; Inter | 94.62 | |
| PRK00517 | 250 | prmA ribosomal protein L11 methyltransferase; Revi | 94.49 | |
| PRK14902 | 444 | 16S rRNA methyltransferase B; Provisional | 94.45 | |
| PRK01544 | 506 | bifunctional N5-glutamine S-adenosyl-L-methionine- | 94.24 | |
| TIGR03439 | 319 | methyl_EasF probable methyltransferase domain, Eas | 94.05 | |
| PRK07402 | 196 | precorrin-6B methylase; Provisional | 93.99 | |
| PF12147 | 311 | Methyltransf_20: Putative methyltransferase; Inter | 93.79 | |
| PRK14901 | 434 | 16S rRNA methyltransferase B; Provisional | 93.66 | |
| PRK04457 | 262 | spermidine synthase; Provisional | 93.65 | |
| TIGR01177 | 329 | conserved hypothetical protein TIGR01177. This fam | 93.1 | |
| COG2518 | 209 | Pcm Protein-L-isoaspartate carboxylmethyltransfera | 92.95 | |
| TIGR00446 | 264 | nop2p NOL1/NOP2/sun family putative RNA methylase. | 92.67 | |
| KOG1331 | 293 | consensus Predicted methyltransferase [General fun | 92.65 | |
| PRK13943 | 322 | protein-L-isoaspartate O-methyltransferase; Provis | 92.54 | |
| PF01135 | 209 | PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl | 91.99 | |
| PLN02672 | 1082 | methionine S-methyltransferase | 91.94 | |
| TIGR00417 | 270 | speE spermidine synthase. the SpeE subunit of sper | 91.37 | |
| PF05724 | 218 | TPMT: Thiopurine S-methyltransferase (TPMT); Inter | 90.99 | |
| KOG3191 | 209 | consensus Predicted N6-DNA-methyltransferase [Tran | 90.59 | |
| KOG1499 | 346 | consensus Protein arginine N-methyltransferase PRM | 90.28 | |
| PF10294 | 173 | Methyltransf_16: Putative methyltransferase; Inter | 90.17 | |
| PHA03412 | 241 | putative methyltransferase; Provisional | 90.08 | |
| PRK03612 | 521 | spermidine synthase; Provisional | 89.61 | |
| PLN02366 | 308 | spermidine synthase | 89.28 | |
| KOG1975 | 389 | consensus mRNA cap methyltransferase [RNA processi | 88.85 | |
| PRK00274 | 272 | ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 | 88.03 | |
| PRK13256 | 226 | thiopurine S-methyltransferase; Reviewed | 87.57 | |
| smart00650 | 169 | rADc Ribosomal RNA adenine dimethylases. | 87.2 | |
| PF01234 | 256 | NNMT_PNMT_TEMT: NNMT/PNMT/TEMT family; InterPro: I | 87.15 | |
| PLN02781 | 234 | Probable caffeoyl-CoA O-methyltransferase | 85.13 | |
| PRK01581 | 374 | speE spermidine synthase; Validated | 84.9 | |
| PRK10611 | 287 | chemotaxis methyltransferase CheR; Provisional | 84.35 | |
| PF01739 | 196 | CheR: CheR methyltransferase, SAM binding domain; | 84.33 | |
| PRK15128 | 396 | 23S rRNA m(5)C1962 methyltransferase; Provisional | 83.99 | |
| COG1352 | 268 | CheR Methylase of chemotaxis methyl-accepting prot | 83.8 | |
| PF13679 | 141 | Methyltransf_32: Methyltransferase domain | 82.79 | |
| COG0220 | 227 | Predicted S-adenosylmethionine-dependent methyltra | 82.12 | |
| PRK11783 | 702 | rlmL 23S rRNA m(2)G2445 methyltransferase; Provisi | 81.63 | |
| KOG2899 | 288 | consensus Predicted methyltransferase [General fun | 80.97 |
| >PLN02668 indole-3-acetate carboxyl methyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-103 Score=780.07 Aligned_cols=356 Identities=38% Similarity=0.621 Sum_probs=324.5
Q ss_pred CcccceeeccCCCCCchhHhhhHHHHHHHHHhHHHHHHHHHhhcccCCC-CceEEEeecCCCCcchHHHHHHHHHHHHHH
Q 017514 1 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSP-TKVAIADLGCSSGPNTLLVASELIKVVNKI 79 (370)
Q Consensus 1 m~~~~~l~M~gg~G~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~-~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~ 79 (370)
|+++++|||+||+|++||++||.+|++++..++|+|+++|++++....+ ++++|||||||+|+||+++++.||++|+++
T Consensus 13 m~~~~~l~M~gG~g~~SYa~nS~~Q~~~~~~~k~~leeai~~~~~~~~p~~~~~iaDlGcs~G~ntl~~vs~iI~~i~~~ 92 (386)
T PLN02668 13 MKLEKLLCMKGGKGEGSYANNSQAQALHARSMLHLLEETLDNVHLNSSPEVPFTAVDLGCSSGSNTIHIIDVIVKHMSKR 92 (386)
T ss_pred ceeccccccCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcceeEEEecCCCCccHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999999999998654334 789999999999999999999999999999
Q ss_pred HHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHH------HHhhCCCCCCCCceEEeecCCCcccccCCCCceeEEE
Q 017514 80 CDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKIL------RKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFH 153 (370)
Q Consensus 80 ~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~------~~~~~~~~~~~~~~f~~~vpgSFy~~l~p~~sv~~~~ 153 (370)
|.+.+.++|+|||||||||+||||+||++||.+.+.+ .+..+. ++||++|||||||+||||++||||+|
T Consensus 93 ~~~~~~~~pe~qv~~nDLP~NDFNtlF~~L~~~~~~~~~~~~~~~~~~~-----~~~f~~gvpGSFY~RLfP~~Slh~~~ 167 (386)
T PLN02668 93 YESAGLDPPEFSAFFSDLPSNDFNTLFQLLPPLANYGGSMEECLAASGH-----RSYFAAGVPGSFYRRLFPARSIDVFH 167 (386)
T ss_pred hhhcCCCCCcceEEecCCCCCCHHHHHhhchhhhhhhcchhhhccccCC-----CceEEEecCccccccccCCCceEEEE
Confidence 9877777889999999999999999999999875532 111111 46999999999999999999999999
Q ss_pred eccccccccCCCCCccC------CCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeccCCCCCC
Q 017514 154 SSYSLQWLSQVPDGLES------NKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPS 227 (370)
Q Consensus 154 S~~alhWls~~P~~~~~------nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~~~~~~ 227 (370)
|++||||||++|+.+.+ |||+||+++++ ++|.+||++||++||..||++||+||+|||+||++++||++.++.
T Consensus 168 Ss~slHWLS~vP~~l~d~~s~~~Nkg~iyi~~~s-~~v~~aY~~Qf~~D~~~FL~~Ra~ELvpGG~mvl~~~Gr~~~~~~ 246 (386)
T PLN02668 168 SAFSLHWLSQVPESVTDKRSAAYNKGRVFIHGAS-ESTANAYKRQFQADLAGFLRARAQEMKRGGAMFLVCLGRTSVDPT 246 (386)
T ss_pred eeccceecccCchhhccCCcccccCCceEecCCC-HHHHHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEEecCCCCCcc
Confidence 99999999999998864 99999999887 789999999999999999999999999999999999999988777
Q ss_pred Cch-hhhHHHH-HHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEEEeecccccccCcccccc
Q 017514 228 SKE-CCYIWEL-LATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQNGFKFNEA 305 (370)
Q Consensus 228 ~~~-~~~~~~~-l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~~~~w~~~~~~~~~~D~ 305 (370)
.++ .+.+|+. +.++|+|||.||+|++||+|+||+|+|+||++|++++|+++|+|+|+++|+++..|+.+.+.. +|
T Consensus 247 ~~~~~~~~~~~~l~~al~dlv~eGlI~eek~dsFniP~Y~ps~eEv~~~Ie~~gsF~I~~le~~~~~~~~~~~~~--~d- 323 (386)
T PLN02668 247 DQGGAGLLFGTHFQDAWDDLVQEGLVTSEKRDSFNIPVYAPSLQDFKEVVEANGSFAIDKLEVFKGGSPLVVNEP--DD- 323 (386)
T ss_pred cCCchhHHHHHHHHHHHHHHHHcCCCCHHHHhcccCcccCCCHHHHHHHHhhcCCEEeeeeEEeeccCcccccCc--cc-
Confidence 665 5667877 999999999999999999999999999999999999999999999999999999998755431 23
Q ss_pred ccccccccchhhhhhHhhhhhHHHHhhChhHHHHHHHHHHHHHHhhhhh--cCCcEEEEEEEEEe
Q 017514 306 VDAFNDGGYNVANCMRAVAEPLLVSQFGEAIIDELFKRYREIVADRMSK--EKTKFINVTVSLTK 368 (370)
Q Consensus 306 ~~~~~~~a~~~a~~~RA~~epll~~hfg~~i~Delf~r~~~~v~~~~~~--~~~~~~~~~~~L~r 368 (370)
....++.+++++||++||+|++|||++|+|+||+||+++++++++. +++++++++++|+-
T Consensus 324 ---~~~~g~~~a~~~RA~~E~ll~~HFG~~i~D~lF~r~~~~v~~~~~~~~~~~~~~~~~~sL~~ 385 (386)
T PLN02668 324 ---AAEVGRAMANSCRSVAGVLVDAHIGEELSNELFLRVERRATSHAKELLEKLQFFHIVASLSF 385 (386)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhcccCceEEEEEEEec
Confidence 4567889999999999999999999999999999999999999998 89999999999873
|
|
| >PF03492 Methyltransf_7: SAM dependent carboxyl methyltransferase; InterPro: IPR005299 This family of plant methyltransferases contains enzymes that act on a variety of substrates including salicylic acid, jasmonic acid and 7-Methylxanthine | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-96 Score=721.00 Aligned_cols=322 Identities=57% Similarity=0.933 Sum_probs=273.7
Q ss_pred HHHHHHhhcc-cCCCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcC-CCCCcceEEeCCCCCCchHHHHHhhHHHH
Q 017514 36 TEEAMTKLFC-STSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLG-SQLPEFQVFLNDLPGNDFNTIFRSLASFQ 113 (370)
Q Consensus 36 l~~ai~~~~~-~~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~-~~~p~i~v~~nDlp~NDFntLF~~l~~~~ 113 (370)
|++||++++. ...+++++|||||||+|+||+.+++.||++|+++|.+.+ +++|+|||||||||+||||+||++|+.+.
T Consensus 1 ~~~ai~~~~~~~~~~~~~~iaD~GcS~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~e~~v~~nDlP~NDFn~lF~~l~~~~ 80 (334)
T PF03492_consen 1 LEEAIKELYNSSNNPKPFRIADLGCSSGPNSLLAVSNIIDAIRERCRSSNNQPPPEFQVFFNDLPSNDFNTLFKSLPSFQ 80 (334)
T ss_dssp -HHHHHHHHHSTTTTTEEEEEEES--SSHHHHHHHHHHHHHHHHHHHCTT-SS--EEEEEEEE-TTS-HHHHHHCHHHHH
T ss_pred ChHHHHHHHhcCCCCCceEEEecCCCCCccHHHHHHHHHHHHHHHhhhhcCCCCCeEEEEeCCCCCccHHHHHHhChhhh
Confidence 5889998875 347899999999999999999999999999999998766 67889999999999999999999999998
Q ss_pred HHHHHhhCCCCCCCCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccC------CCceeeecCCCCHHHHH
Q 017514 114 KILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLES------NKGNIFMASTSPPCVLT 187 (370)
Q Consensus 114 ~~~~~~~~~~~~~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~------nk~~i~~~~~s~~~v~~ 187 (370)
+++.+ . ++||++|||||||+||||++||||+||++||||||++|+.+.+ |||+||++++++++|.+
T Consensus 81 ~~~~~--~------~~~f~~gvpgSFy~rLfP~~Svh~~~Ss~alHWLS~vP~~l~~~~~~~~Nkg~i~~~~~~~~~v~~ 152 (334)
T PF03492_consen 81 QSLKK--F------RNYFVSGVPGSFYGRLFPSNSVHFGHSSYALHWLSQVPEELVDKSSPAWNKGNIYISRTSPPEVAK 152 (334)
T ss_dssp HHHHH--T------TSEEEEEEES-TTS--S-TT-EEEEEEES-TTB-SSS-CCCCTTTSTTTSTTTSSSSTTS-HHHHH
T ss_pred hccCC--C------ceEEEEecCchhhhccCCCCceEEEEEechhhhcccCCcccccccccccccCcEEEecCCCHHHHH
Confidence 88765 1 6899999999999999999999999999999999999999988 99999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCC
Q 017514 188 AYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPS 267 (370)
Q Consensus 188 ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s 267 (370)
||++||++||.+||++||+||+|||+|||+++||++.++...+.+.+|++|+++|+|||.||+|++||+|+||+|+|+||
T Consensus 153 ay~~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~~~~~~~~~~l~~~l~dMv~eGlI~~ek~dsfniP~Y~ps 232 (334)
T PF03492_consen 153 AYAKQFQKDFSSFLKARAEELVPGGRMVLTFLGRDEEDPSSTGSCMLWDLLADALRDMVAEGLISEEKVDSFNIPIYFPS 232 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEE-STSSTTSTTCCCHHHHHHHHHHHHHHTTSS-HCCCCTG--SBB---
T ss_pred HHHHHHHHHHHHHHHHhhheeccCcEEEEEEeeccccccccCCcchHHHHHHHHHHHHHHcCCcCHHHhhceeCCccCCC
Confidence 99999999999999999999999999999999999977776666789999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCceEEEEEEEEeeccccccc-CccccccccccccccchhhhhhHhhhhhHHHHhhChhHHHHHHHHHHH
Q 017514 268 PAEIKSEVIKEGSFTIDHLEVSEVNWNAYQN-GFKFNEAVDAFNDGGYNVANCMRAVAEPLLVSQFGEAIIDELFKRYRE 346 (370)
Q Consensus 268 ~eE~~~~ie~~GsF~i~~le~~~~~w~~~~~-~~~~~D~~~~~~~~a~~~a~~~RA~~epll~~hfg~~i~Delf~r~~~ 346 (370)
.+||+++|+++|+|+|+++|+++.+|..... ....+| ...+|+.+++++|||+||+|++|||++|+|+||+||++
T Consensus 233 ~eEv~~~I~~~gsF~I~~le~~~~~~~~~~~~~~~~~d----~~~~~~~~~~~iRA~~e~~l~~hfG~ei~D~LF~r~~~ 308 (334)
T PF03492_consen 233 PEEVRAIIEEEGSFEIEKLELFEQPWWSVPDDESWKED----AKEYARNVANYIRAVFEPLLKAHFGEEIMDELFERYAK 308 (334)
T ss_dssp HHHHHHHHHHHTSEEEEEEEEEEEETCCTCTTT-STTT----HHCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEEEEEEeecccccchhhhcccc----hhhhHHHHHHhHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 9999999999999999999999977554332 111123 67889999999999999999999999999999999999
Q ss_pred HHHhhhhhcC---CcEEEEEEEEEec
Q 017514 347 IVADRMSKEK---TKFINVTVSLTKI 369 (370)
Q Consensus 347 ~v~~~~~~~~---~~~~~~~~~L~r~ 369 (370)
+++++++.++ +++++++++|+||
T Consensus 309 ~v~~~~~~~~~~~~~~~~i~~~L~Rk 334 (334)
T PF03492_consen 309 KVAEHLEKEKSRNMKFVNIVVSLTRK 334 (334)
T ss_dssp HHHHHHHHTHTT-BEEEEEEEEEEE-
T ss_pred HHHHHHHHhhccCCCcEEEEEEEeeC
Confidence 9999998766 8899999999997
|
Caffeine is synthesized through sequential three-step methylation of xanthine derivatives at positions 7-N, 3-N, and 1-N. The protein 7-methylxanthine methyltransferase (designated as CaMXMT) catalyses the second step to produce theobromine [].; GO: 0008168 methyltransferase activity; PDB: 2EFJ_A 1M6E_X 2EG5_C 3B5I_B. |
| >PRK01683 trans-aconitate 2-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=5.4e-12 Score=119.45 Aligned_cols=251 Identities=14% Similarity=0.183 Sum_probs=148.7
Q ss_pred ccCCCCCchhHhhhHHHHHHHHHhHHHHHHHHHhhcccCCCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCC
Q 017514 9 MNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLP 88 (370)
Q Consensus 9 M~gg~G~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p 88 (370)
|..++. ..|.+++..|.+....++. .+. .....+|+|+|||+|..+..+. +++ |
T Consensus 1 ~~~w~~-~~Y~~~~~~~~~~~~~ll~-------~~~---~~~~~~vLDiGcG~G~~~~~la--------~~~-------~ 54 (258)
T PRK01683 1 MSDWNP-SLYLKFEDERTRPARDLLA-------RVP---LENPRYVVDLGCGPGNSTELLV--------ERW-------P 54 (258)
T ss_pred CCCCCH-HHHHHHHHHhhcHHHHHHh-------hCC---CcCCCEEEEEcccCCHHHHHHH--------HHC-------C
Confidence 555665 7899999888766544332 111 1345799999999999887655 321 3
Q ss_pred cceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCc
Q 017514 89 EFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGL 168 (370)
Q Consensus 89 ~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~ 168 (370)
.-+|+..|+. +.......+... +--|..+ ++ ..+.|++++|+++|+.++||+.. +
T Consensus 55 ~~~v~gvD~s-----------~~~i~~a~~~~~------~~~~~~~---d~-~~~~~~~~fD~v~~~~~l~~~~d-~--- 109 (258)
T PRK01683 55 AARITGIDSS-----------PAMLAEARSRLP------DCQFVEA---DI-ASWQPPQALDLIFANASLQWLPD-H--- 109 (258)
T ss_pred CCEEEEEECC-----------HHHHHHHHHhCC------CCeEEEC---ch-hccCCCCCccEEEEccChhhCCC-H---
Confidence 4688889975 332222222111 1234433 55 35567889999999999999643 1
Q ss_pred cCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhc
Q 017514 169 ESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSE 248 (370)
Q Consensus 169 ~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~e 248 (370)
..+|+.-.+-|+|||.+++.+.+.... + .+. .+.++...
T Consensus 110 -----------------------------~~~l~~~~~~LkpgG~~~~~~~~~~~~-~-------~~~----~~~~~~~~ 148 (258)
T PRK01683 110 -----------------------------LELFPRLVSLLAPGGVLAVQMPDNLDE-P-------SHV----LMREVAEN 148 (258)
T ss_pred -----------------------------HHHHHHHHHhcCCCcEEEEECCCCCCC-H-------HHH----HHHHHHcc
Confidence 125667788999999999986432111 1 111 12222211
Q ss_pred CCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEEEeecccccccCccccccccccccccchhhhhhHhh-hhhH
Q 017514 249 GLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQNGFKFNEAVDAFNDGGYNVANCMRAV-AEPL 327 (370)
Q Consensus 249 G~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~~~~w~~~~~~~~~~D~~~~~~~~a~~~a~~~RA~-~epl 327 (370)
......-...-..+.+.++++++...+.+.| +.++..+.. +... -...+.+..|+++. +.|+
T Consensus 149 ~~w~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~v~~~~~~---~~~~-------------~~~~~~~~~~~~~~~~~~~ 211 (258)
T PRK01683 149 GPWEQNLPDRGARRAPLPPPHAYYDALAPAA-CRVDIWHTT---YYHP-------------MPSAQAIVEWVKGTGLRPF 211 (258)
T ss_pred CchHHHhccccccCcCCCCHHHHHHHHHhCC-Cceeeeeee---eeee-------------cCCchhhhhhhhhccHHHH
Confidence 1111110011122346789999999999999 555443332 1110 01134566677764 3666
Q ss_pred HHHhhChhHHHHHHHHHHHHHHhhhh-hcC----CcEEEEEEEEEec
Q 017514 328 LVSQFGEAIIDELFKRYREIVADRMS-KEK----TKFINVTVSLTKI 369 (370)
Q Consensus 328 l~~hfg~~i~Delf~r~~~~v~~~~~-~~~----~~~~~~~~~L~r~ 369 (370)
+ .+++++..+++.++|.+.+.+... ... ..|.-++++-+|+
T Consensus 212 ~-~~l~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 257 (258)
T PRK01683 212 L-DPLTESEQAAFLAAYLARIAEAYPLQADGKVLLAFPRLFIVARRK 257 (258)
T ss_pred H-hhCCHHHHHHHHHHHHHHHHHHCCCCCCCcEEcccceEEEEEEec
Confidence 6 569999999999999999988753 222 3455556666554
|
|
| >PRK14103 trans-aconitate 2-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=9.6e-12 Score=117.94 Aligned_cols=225 Identities=16% Similarity=0.204 Sum_probs=137.9
Q ss_pred chhHhhhHHHHHHHHHhHHHHHHHHHhhcccCCCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeC
Q 017514 16 TSYASNSLVQEKVISIAKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLN 95 (370)
Q Consensus 16 ~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~n 95 (370)
..|.+++..|.+....++..+. .....+|+|+|||+|..+..+. +++ |..+|+.-
T Consensus 5 ~~y~~~~~~~~~~~~~ll~~l~----------~~~~~~vLDlGcG~G~~~~~l~--------~~~-------p~~~v~gv 59 (255)
T PRK14103 5 DVYLAFADHRGRPFYDLLARVG----------AERARRVVDLGCGPGNLTRYLA--------RRW-------PGAVIEAL 59 (255)
T ss_pred HHHHHHHhHhhCHHHHHHHhCC----------CCCCCEEEEEcCCCCHHHHHHH--------HHC-------CCCEEEEE
Confidence 5799999999876644332221 1245799999999998776544 321 34678888
Q ss_pred CCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCcee
Q 017514 96 DLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNI 175 (370)
Q Consensus 96 Dlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i 175 (370)
|+- +.....-.+ . +-.|.. +++ ..+.|++++|+++|+.+|||+.. |.
T Consensus 60 D~s-----------~~~~~~a~~---~-----~~~~~~---~d~-~~~~~~~~fD~v~~~~~l~~~~d-~~--------- 106 (255)
T PRK14103 60 DSS-----------PEMVAAARE---R-----GVDART---GDV-RDWKPKPDTDVVVSNAALQWVPE-HA--------- 106 (255)
T ss_pred ECC-----------HHHHHHHHh---c-----CCcEEE---cCh-hhCCCCCCceEEEEehhhhhCCC-HH---------
Confidence 874 222111111 1 113433 365 46677889999999999999643 11
Q ss_pred eecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeccCCCCCCCchhhhHHHHHH--HHHHHHHhcCCcch
Q 017514 176 FMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLA--TALNNMVSEGLIEE 253 (370)
Q Consensus 176 ~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~--~al~~mv~eG~i~~ 253 (370)
.+|+.=++-|+|||++++++.+.... + . ......+. ..|.....
T Consensus 107 -----------------------~~l~~~~~~LkpgG~l~~~~~~~~~~-~-~---~~~~~~~~~~~~w~~~~~------ 152 (255)
T PRK14103 107 -----------------------DLLVRWVDELAPGSWIAVQVPGNFDA-P-S---HAAVRALARREPWAKLLR------ 152 (255)
T ss_pred -----------------------HHHHHHHHhCCCCcEEEEEcCCCcCC-h-h---HHHHHHHhccCchhHHhc------
Confidence 14555578899999999987653211 1 0 01111111 12322211
Q ss_pred hhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEEEeecccccccCccccccccccccccchhhhhhHhh-hhhHHHHhh
Q 017514 254 EKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQNGFKFNEAVDAFNDGGYNVANCMRAV-AEPLLVSQF 332 (370)
Q Consensus 254 e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~~~~w~~~~~~~~~~D~~~~~~~~a~~~a~~~RA~-~epll~~hf 332 (370)
-..+..+....+++++...+++.| |++...+..... .. .....+..|+++. +.+++. .+
T Consensus 153 --~~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~~~~--~~--------------~~~~~~~~~~~~~~~~~~~~-~l 212 (255)
T PRK14103 153 --DIPFRVGAVVQTPAGYAELLTDAG-CKVDAWETTYVH--QL--------------TGEDPVLDWITGTALRPVRE-RL 212 (255)
T ss_pred --ccccccCcCCCCHHHHHHHHHhCC-CeEEEEeeeeee--eC--------------CCchhhhhhhhccchhhhhh-hC
Confidence 011234556789999999999999 987655542211 11 1123455566654 356666 59
Q ss_pred ChhHHHHHHHHHHHHHHhhh
Q 017514 333 GEAIIDELFKRYREIVADRM 352 (370)
Q Consensus 333 g~~i~Delf~r~~~~v~~~~ 352 (370)
+++..+++-+.+.+.+++.+
T Consensus 213 ~~~~~~~~~~~~~~~l~~~~ 232 (255)
T PRK14103 213 SDDSWEQFRAELIPLLREAY 232 (255)
T ss_pred CHHHHHHHHHHHHHHHHHHC
Confidence 99999999999999998875
|
|
| >TIGR02072 BioC biotin biosynthesis protein BioC | Back alignment and domain information |
|---|
Probab=99.19 E-value=5e-10 Score=103.45 Aligned_cols=134 Identities=19% Similarity=0.253 Sum_probs=91.5
Q ss_pred CchhHhhhHHHHHHHHHhHHHHHHHHHhhcccCCCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEe
Q 017514 15 GTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFL 94 (370)
Q Consensus 15 ~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~ 94 (370)
..+|.+.+..|+.+...+.+.+.... ..++.+|+|+|||+|..+..+. +. + |..+++.
T Consensus 6 ~~~y~~~~~~q~~~~~~l~~~~~~~~-------~~~~~~vLDlG~G~G~~~~~l~--------~~----~---~~~~~~~ 63 (240)
T TIGR02072 6 AKTYDRHAKIQREMAKRLLALLKEKG-------IFIPASVLDIGCGTGYLTRALL--------KR----F---PQAEFIA 63 (240)
T ss_pred hhchhHHHHHHHHHHHHHHHHhhhhc-------cCCCCeEEEECCCccHHHHHHH--------Hh----C---CCCcEEE
Confidence 36799999999988888777665431 1335789999999999877555 22 1 3467888
Q ss_pred CCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCce
Q 017514 95 NDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGN 174 (370)
Q Consensus 95 nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~ 174 (370)
.|+. +.......+.... +-.|+.+ ++....+|++++|+++++.++||+.. |
T Consensus 64 ~D~~-----------~~~~~~~~~~~~~-----~~~~~~~---d~~~~~~~~~~fD~vi~~~~l~~~~~-~--------- 114 (240)
T TIGR02072 64 LDIS-----------AGMLAQAKTKLSE-----NVQFICG---DAEKLPLEDSSFDLIVSNLALQWCDD-L--------- 114 (240)
T ss_pred EeCh-----------HHHHHHHHHhcCC-----CCeEEec---chhhCCCCCCceeEEEEhhhhhhccC-H---------
Confidence 8875 2222222221111 1234443 66566678899999999999999643 1
Q ss_pred eeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeccC
Q 017514 175 IFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRK 222 (370)
Q Consensus 175 i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~ 222 (370)
..+|+...+-|+|||.+++..++..
T Consensus 115 -----------------------~~~l~~~~~~L~~~G~l~~~~~~~~ 139 (240)
T TIGR02072 115 -----------------------SQALSELARVLKPGGLLAFSTFGPG 139 (240)
T ss_pred -----------------------HHHHHHHHHHcCCCcEEEEEeCCcc
Confidence 2367888999999999999876543
|
This enzyme, which is found in biotin biosynthetic gene clusters in proteobacteria, firmicutes, green-sulfur bacteria, fusobacterium and bacteroides, is believed to carry out an enzymatic step prior to the formation of pimeloyl-CoA (although attribution of this annotation is not traceable). The enzyme appears related to methyltransferases by homology. |
| >PRK10258 biotin biosynthesis protein BioC; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=4e-09 Score=99.50 Aligned_cols=172 Identities=15% Similarity=0.163 Sum_probs=107.3
Q ss_pred chhHhhhHHHHHHHHHhHHHHHHHHHhhcccCCCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeC
Q 017514 16 TSYASNSLVQEKVISIAKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLN 95 (370)
Q Consensus 16 ~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~n 95 (370)
.+|.+++.+|+.+...+...+. ....-+|+|+|||+|.++..+. +. ..+|+..
T Consensus 18 ~~Y~~~~~~q~~~a~~l~~~l~----------~~~~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~~~ 70 (251)
T PRK10258 18 AHYEQHAELQRQSADALLAMLP----------QRKFTHVLDAGCGPGWMSRYWR--------ER---------GSQVTAL 70 (251)
T ss_pred HhHhHHHHHHHHHHHHHHHhcC----------ccCCCeEEEeeCCCCHHHHHHH--------Hc---------CCeEEEE
Confidence 4688888888887766554432 1134689999999998776442 21 2578888
Q ss_pred CCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCcee
Q 017514 96 DLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNI 175 (370)
Q Consensus 96 Dlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i 175 (370)
|+- +...+...+. .. ...|+.+ ++-.--+|++++|+++|+.++||....+
T Consensus 71 D~s-----------~~~l~~a~~~-~~-----~~~~~~~---d~~~~~~~~~~fD~V~s~~~l~~~~d~~---------- 120 (251)
T PRK10258 71 DLS-----------PPMLAQARQK-DA-----ADHYLAG---DIESLPLATATFDLAWSNLAVQWCGNLS---------- 120 (251)
T ss_pred ECC-----------HHHHHHHHhh-CC-----CCCEEEc---CcccCcCCCCcEEEEEECchhhhcCCHH----------
Confidence 875 3322222211 11 1234443 5533346788999999999999955421
Q ss_pred eecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhh
Q 017514 176 FMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEK 255 (370)
Q Consensus 176 ~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~ 255 (370)
.+|+.-.+-|+|||.++++.++.++. .-+.++|..+- +
T Consensus 121 -----------------------~~l~~~~~~Lk~gG~l~~~~~~~~~~-----------~el~~~~~~~~--~------ 158 (251)
T PRK10258 121 -----------------------TALRELYRVVRPGGVVAFTTLVQGSL-----------PELHQAWQAVD--E------ 158 (251)
T ss_pred -----------------------HHHHHHHHHcCCCeEEEEEeCCCCch-----------HHHHHHHHHhc--c------
Confidence 25666678999999999999876532 22445554331 1
Q ss_pred hccCCcCcccCCHHHHHHHHHhcCceEEEEEEEEee
Q 017514 256 VNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEV 291 (370)
Q Consensus 256 ~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~~~ 291 (370)
-....-+++.+|+...+...+ +++ ..+.+..
T Consensus 159 ---~~~~~~~~~~~~l~~~l~~~~-~~~-~~~~~~~ 189 (251)
T PRK10258 159 ---RPHANRFLPPDAIEQALNGWR-YQH-HIQPITL 189 (251)
T ss_pred ---CCccccCCCHHHHHHHHHhCC-cee-eeeEEEE
Confidence 112233578999999998766 554 3344433
|
|
| >TIGR00740 methyltransferase, putative | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.1e-07 Score=89.17 Aligned_cols=161 Identities=20% Similarity=0.217 Sum_probs=95.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHh---hCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQ---LGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~---~~~~~~~ 126 (370)
...+|+|+|||+|..+..+. +++ ..|..+++.-|+- +......++. .+...
T Consensus 53 ~~~~iLDlGcG~G~~~~~l~--------~~~-----~~p~~~v~gvD~s-----------~~ml~~a~~~~~~~~~~~-- 106 (239)
T TIGR00740 53 PDSNVYDLGCSRGAATLSAR--------RNI-----NQPNVKIIGIDNS-----------QPMVERCRQHIAAYHSEI-- 106 (239)
T ss_pred CCCEEEEecCCCCHHHHHHH--------Hhc-----CCCCCeEEEEeCC-----------HHHHHHHHHHHHhcCCCC--
Confidence 34689999999999887666 321 1245888888874 2222211111 11110
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
+-.| +-+++..- |..+.|++++++++||++. .|...+|+.-.+
T Consensus 107 -~v~~---~~~d~~~~--~~~~~d~v~~~~~l~~~~~-------------------------------~~~~~~l~~i~~ 149 (239)
T TIGR00740 107 -PVEI---LCNDIRHV--EIKNASMVILNFTLQFLPP-------------------------------EDRIALLTKIYE 149 (239)
T ss_pred -CeEE---EECChhhC--CCCCCCEEeeecchhhCCH-------------------------------HHHHHHHHHHHH
Confidence 1133 33477432 3335789999999999642 223347888899
Q ss_pred hhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHh-cCCcchhhh----ccCCcCcccCCHHHHHHHHHhcCce
Q 017514 207 ELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVS-EGLIEEEKV----NCFNIPQYTPSPAEIKSEVIKEGSF 281 (370)
Q Consensus 207 EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~-eG~i~~e~~----d~f~~P~y~~s~eE~~~~ie~~GsF 281 (370)
-|+|||++++.-..+.+... ..+.+...+..+.. +|. +++++ +.+.-.....|++|+++.+++.| |
T Consensus 150 ~LkpgG~l~i~d~~~~~~~~-------~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aG-F 220 (239)
T TIGR00740 150 GLNPNGVLVLSEKFRFEDTK-------INHLLIDLHHQFKRANGY-SELEISQKRTALENVMRTDSIETHKARLKNVG-F 220 (239)
T ss_pred hcCCCeEEEEeecccCCCHh-------HHHHHHHHHHHHHHHcCC-CHHHHHHHHHHHhccCCCCCHHHHHHHHHHcC-C
Confidence 99999999998654433211 12233333333333 343 44333 22223344579999999999999 7
Q ss_pred E
Q 017514 282 T 282 (370)
Q Consensus 282 ~ 282 (370)
+
T Consensus 221 ~ 221 (239)
T TIGR00740 221 S 221 (239)
T ss_pred c
Confidence 5
|
A simple BLAST search finds all members of this family and weaker hits to a large number of known and predicted methyltransferases. A single iteration with PSI-BLAST, keeping only clear members of the family, leads to a large number of highly significant hits to a set of known and predicted methyltransferases with a large repertoire of different specifities. This model is restricted to a subfamily found so far only in the Proteobacteria, sharing consistent length, full-length homology, and on average better than 35 % identity. It is reasonable to predict equivalent function within this subfamily. |
| >TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.8e-08 Score=92.32 Aligned_cols=173 Identities=12% Similarity=0.149 Sum_probs=94.7
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhh-CCCCCCCCc
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAAGQ 129 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~-~~~~~~~~~ 129 (370)
.-+|+|+|||+|..+..+. +.+ .|..+|+..|+. +......+... .... .+-
T Consensus 46 ~~~vLDiGcG~G~~~~~la--------~~~------~~~~~v~gvD~s-----------~~~~~~a~~~~~~~~~--~~v 98 (231)
T TIGR02752 46 GTSALDVCCGTADWSIALA--------EAV------GPEGHVIGLDFS-----------ENMLSVGRQKVKDAGL--HNV 98 (231)
T ss_pred CCEEEEeCCCcCHHHHHHH--------HHh------CCCCEEEEEECC-----------HHHHHHHHHHHHhcCC--Cce
Confidence 4699999999999877555 321 134678888874 22221111111 1111 012
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
.++. +++..--+|++++|++++..++||++.. ..+|+.-.+-|+
T Consensus 99 ~~~~---~d~~~~~~~~~~fD~V~~~~~l~~~~~~---------------------------------~~~l~~~~~~Lk 142 (231)
T TIGR02752 99 ELVH---GNAMELPFDDNSFDYVTIGFGLRNVPDY---------------------------------MQVLREMYRVVK 142 (231)
T ss_pred EEEE---echhcCCCCCCCccEEEEecccccCCCH---------------------------------HHHHHHHHHHcC
Confidence 3333 3554434678999999999999996431 125666678899
Q ss_pred cCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEEE
Q 017514 210 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 289 (370)
Q Consensus 210 ~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~ 289 (370)
|||++++.-.+.++......-....+..+-..+......+........ ..-..+++.+|+++.+++.| |++.+++.+
T Consensus 143 ~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~aG-f~~~~~~~~ 219 (231)
T TIGR02752 143 PGGKVVCLETSQPTIPGFKQLYFFYFKYIMPLFGKLFAKSYKEYSWLQ--ESTRDFPGMDELAEMFQEAG-FKDVEVKSY 219 (231)
T ss_pred cCeEEEEEECCCCCChHHHHHHHHHHcChhHHhhHHhcCCHHHHHHHH--HHHHHcCCHHHHHHHHHHcC-CCeeEEEEc
Confidence 999999876554332100000000111111112211111110000000 01235789999999999999 988777655
|
MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species. |
| >PTZ00098 phosphoethanolamine N-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.1e-06 Score=84.11 Aligned_cols=195 Identities=11% Similarity=0.052 Sum_probs=111.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
...+|+|+|||+|..+..+. +. ...+|+..|+. +.......+...... +-
T Consensus 52 ~~~~VLDiGcG~G~~a~~la--------~~--------~~~~v~giD~s-----------~~~~~~a~~~~~~~~---~i 101 (263)
T PTZ00098 52 ENSKVLDIGSGLGGGCKYIN--------EK--------YGAHVHGVDIC-----------EKMVNIAKLRNSDKN---KI 101 (263)
T ss_pred CCCEEEEEcCCCChhhHHHH--------hh--------cCCEEEEEECC-----------HHHHHHHHHHcCcCC---ce
Confidence 45799999999999876554 22 12578888875 332222222111110 22
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
.|.. +++...-+|++++|+++|..+++++ |. .|...+|+.-++-|+
T Consensus 102 ~~~~---~D~~~~~~~~~~FD~V~s~~~l~h~---~~----------------------------~d~~~~l~~i~r~Lk 147 (263)
T PTZ00098 102 EFEA---NDILKKDFPENTFDMIYSRDAILHL---SY----------------------------ADKKKLFEKCYKWLK 147 (263)
T ss_pred EEEE---CCcccCCCCCCCeEEEEEhhhHHhC---CH----------------------------HHHHHHHHHHHHHcC
Confidence 3433 4775555789999999998887663 21 234457788889999
Q ss_pred cCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEEE
Q 017514 210 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 289 (370)
Q Consensus 210 ~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~ 289 (370)
|||+++++-....+.... -+.+...+. .. ....++++++.+.+++.| |+....+-.
T Consensus 148 PGG~lvi~d~~~~~~~~~-------~~~~~~~~~----~~------------~~~~~~~~~~~~~l~~aG-F~~v~~~d~ 203 (263)
T PTZ00098 148 PNGILLITDYCADKIENW-------DEEFKAYIK----KR------------KYTLIPIQEYGDLIKSCN-FQNVVAKDI 203 (263)
T ss_pred CCcEEEEEEeccccccCc-------HHHHHHHHH----hc------------CCCCCCHHHHHHHHHHCC-CCeeeEEeC
Confidence 999999987655432110 111111111 10 113469999999999999 887665533
Q ss_pred eecccccccCccccccccccccccchhhhhhHhhhhhHHHHhhChhHHHHHHHHHHHHHH
Q 017514 290 EVNWNAYQNGFKFNEAVDAFNDGGYNVANCMRAVAEPLLVSQFGEAIIDELFKRYREIVA 349 (370)
Q Consensus 290 ~~~w~~~~~~~~~~D~~~~~~~~a~~~a~~~RA~~epll~~hfg~~i~Delf~r~~~~v~ 349 (370)
...|.. .+. .+...+++- +.-+...+|++..+.+-.-+...+.
T Consensus 204 ~~~~~~---------------~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (263)
T PTZ00098 204 SDYWLE---------------LLQ-VELKKLEEK-KEEFLKLYSEKEYNSLKDGWTRKIK 246 (263)
T ss_pred cHHHHH---------------HHH-HHHHHHHHh-HHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 222211 111 222222222 2333445787776666666655554
|
|
| >PLN02336 phosphoethanolamine N-methyltransferase | Back alignment and domain information |
|---|
Probab=98.71 E-value=8.4e-07 Score=91.48 Aligned_cols=192 Identities=15% Similarity=0.191 Sum_probs=115.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHh-hCCCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQ-LGSASGAAG 128 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~-~~~~~~~~~ 128 (370)
...+|+|+|||+|..++.+. +. ...+|+--|+. +.....-.+. .+... +
T Consensus 266 ~~~~vLDiGcG~G~~~~~la--------~~--------~~~~v~gvDiS-----------~~~l~~A~~~~~~~~~---~ 315 (475)
T PLN02336 266 PGQKVLDVGCGIGGGDFYMA--------EN--------FDVHVVGIDLS-----------VNMISFALERAIGRKC---S 315 (475)
T ss_pred CCCEEEEEeccCCHHHHHHH--------Hh--------cCCEEEEEECC-----------HHHHHHHHHHhhcCCC---c
Confidence 34699999999998766544 22 12578888875 2211111111 11110 2
Q ss_pred ceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
-.|..+ ++....+|++++|+++|..+++|+.. |. .+|+.-++-|
T Consensus 316 v~~~~~---d~~~~~~~~~~fD~I~s~~~l~h~~d-~~--------------------------------~~l~~~~r~L 359 (475)
T PLN02336 316 VEFEVA---DCTKKTYPDNSFDVIYSRDTILHIQD-KP--------------------------------ALFRSFFKWL 359 (475)
T ss_pred eEEEEc---CcccCCCCCCCEEEEEECCcccccCC-HH--------------------------------HHHHHHHHHc
Confidence 234444 77666678899999999999999643 11 2566678899
Q ss_pred ccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEE
Q 017514 209 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEV 288 (370)
Q Consensus 209 ~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~ 288 (370)
+|||++++....+....+. . .+...+. ..| ...++.+++...+++.| |++...+.
T Consensus 360 kpgG~l~i~~~~~~~~~~~-~-------~~~~~~~---~~g-------------~~~~~~~~~~~~l~~aG-F~~i~~~d 414 (475)
T PLN02336 360 KPGGKVLISDYCRSPGTPS-P-------EFAEYIK---QRG-------------YDLHDVQAYGQMLKDAG-FDDVIAED 414 (475)
T ss_pred CCCeEEEEEEeccCCCCCc-H-------HHHHHHH---hcC-------------CCCCCHHHHHHHHHHCC-Ceeeeeec
Confidence 9999999998876543221 1 1111111 111 24578999999999999 98875553
Q ss_pred EeecccccccCccccccccccccccchhhhhhHhhhh--hHHHHhhChhHHHHHHHHHHHHHHhh
Q 017514 289 SEVNWNAYQNGFKFNEAVDAFNDGGYNVANCMRAVAE--PLLVSQFGEAIIDELFKRYREIVADR 351 (370)
Q Consensus 289 ~~~~w~~~~~~~~~~D~~~~~~~~a~~~a~~~RA~~e--pll~~hfg~~i~Delf~r~~~~v~~~ 351 (370)
+.. .+...++.+..++.. .-+.+.+|++..+.+...+...+...
T Consensus 415 ~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 460 (475)
T PLN02336 415 RTD-------------------QFLQVLQRELDAVEKEKDEFISDFSEEDYNDIVGGWKAKLVRS 460 (475)
T ss_pred chH-------------------HHHHHHHHHHHHHHhCHHHHHHhcCHHHHHHHHHhHHHHHhhh
Confidence 321 122333333333211 12234588888888888887777654
|
|
| >PLN02233 ubiquinone biosynthesis methyltransferase | Back alignment and domain information |
|---|
Probab=98.68 E-value=4.9e-07 Score=86.43 Aligned_cols=165 Identities=13% Similarity=0.142 Sum_probs=93.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhC----CCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLG----SASG 125 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~----~~~~ 125 (370)
..-+|+|+|||+|..+..+. +++ .|.-+|+--|+- +...+...++.. ...
T Consensus 73 ~~~~VLDlGcGtG~~~~~la--------~~~------~~~~~V~gvD~S-----------~~ml~~A~~r~~~~~~~~~- 126 (261)
T PLN02233 73 MGDRVLDLCCGSGDLAFLLS--------EKV------GSDGKVMGLDFS-----------SEQLAVAASRQELKAKSCY- 126 (261)
T ss_pred CCCEEEEECCcCCHHHHHHH--------HHh------CCCCEEEEEECC-----------HHHHHHHHHHhhhhhhccC-
Confidence 35799999999999776544 321 134578888875 333322221110 000
Q ss_pred CCCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 126 AAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRS 205 (370)
Q Consensus 126 ~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra 205 (370)
.+-.|+.+ +...--+|++|+|++++++++||+.+ | ..+|+.-+
T Consensus 127 -~~i~~~~~---d~~~lp~~~~sfD~V~~~~~l~~~~d-~--------------------------------~~~l~ei~ 169 (261)
T PLN02233 127 -KNIEWIEG---DATDLPFDDCYFDAITMGYGLRNVVD-R--------------------------------LKAMQEMY 169 (261)
T ss_pred -CCeEEEEc---ccccCCCCCCCEeEEEEecccccCCC-H--------------------------------HHHHHHHH
Confidence 01234444 44222358899999999999999643 1 12567778
Q ss_pred HhhccCceEEEEeeccCCCCCCCchhhhHHHHH-HHHHHHHHh-cCCcchhhhccCCcC---cccCCHHHHHHHHHhcCc
Q 017514 206 EELVAEGRMVLTFLGRKSQDPSSKECCYIWELL-ATALNNMVS-EGLIEEEKVNCFNIP---QYTPSPAEIKSEVIKEGS 280 (370)
Q Consensus 206 ~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l-~~al~~mv~-eG~i~~e~~d~f~~P---~y~~s~eE~~~~ie~~Gs 280 (370)
+-|+|||++++.-++.++... . ..++... ...+.-+.. -|. .+++.. ++ -.+++.+|+.+.+++.|
T Consensus 170 rvLkpGG~l~i~d~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~--~~~y~~--l~~s~~~f~s~~el~~ll~~aG- 240 (261)
T PLN02233 170 RVLKPGSRVSILDFNKSTQPF-T---TSMQEWMIDNVVVPVATGYGL--AKEYEY--LKSSINEYLTGEELEKLALEAG- 240 (261)
T ss_pred HHcCcCcEEEEEECCCCCcHH-H---HHHHHHHHhhhhhHHHHHhCC--hHHHHH--HHHHHHhcCCHHHHHHHHHHCC-
Confidence 899999999999887664311 0 1111111 111111100 021 111100 01 12789999999999999
Q ss_pred eEEEEE
Q 017514 281 FTIDHL 286 (370)
Q Consensus 281 F~i~~l 286 (370)
|++.+.
T Consensus 241 F~~~~~ 246 (261)
T PLN02233 241 FSSAKH 246 (261)
T ss_pred CCEEEE
Confidence 876543
|
|
| >PRK15068 tRNA mo(5)U34 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.3e-07 Score=93.26 Aligned_cols=152 Identities=20% Similarity=0.250 Sum_probs=93.1
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc-
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ- 129 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~- 129 (370)
.-+|+|+|||+|..++.+. +. | + -+|+--| |+-.+..-|+.... ..+.. .+
T Consensus 123 g~~VLDIGCG~G~~~~~la--------~~----g---~-~~V~GiD-~S~~~l~q~~a~~~-------~~~~~----~~i 174 (322)
T PRK15068 123 GRTVLDVGCGNGYHMWRML--------GA----G---A-KLVVGID-PSQLFLCQFEAVRK-------LLGND----QRA 174 (322)
T ss_pred CCEEEEeccCCcHHHHHHH--------Hc----C---C-CEEEEEc-CCHHHHHHHHHHHH-------hcCCC----CCe
Confidence 3699999999999988655 22 2 3 2477778 43333322222211 11111 12
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
.| +++++ +.+-.++++|+++|..+|||... | ..+|+.-++-|+
T Consensus 175 ~~---~~~d~-e~lp~~~~FD~V~s~~vl~H~~d-p--------------------------------~~~L~~l~~~Lk 217 (322)
T PRK15068 175 HL---LPLGI-EQLPALKAFDTVFSMGVLYHRRS-P--------------------------------LDHLKQLKDQLV 217 (322)
T ss_pred EE---EeCCH-HHCCCcCCcCEEEECChhhccCC-H--------------------------------HHHHHHHHHhcC
Confidence 33 33455 44444789999999999998543 2 125777788999
Q ss_pred cCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEEE
Q 017514 210 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 289 (370)
Q Consensus 210 ~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~ 289 (370)
|||.+++..+..+..... . . ...+.+..+.-.++.||.+++...+++.| |++.+++-.
T Consensus 218 pGG~lvl~~~~i~~~~~~----~-l----------------~p~~~y~~~~~~~~lps~~~l~~~L~~aG-F~~i~~~~~ 275 (322)
T PRK15068 218 PGGELVLETLVIDGDENT----V-L----------------VPGDRYAKMRNVYFIPSVPALKNWLERAG-FKDVRIVDV 275 (322)
T ss_pred CCcEEEEEEEEecCCCcc----c-c----------------CchhHHhcCccceeCCCHHHHHHHHHHcC-CceEEEEeC
Confidence 999999987655433210 0 0 11111223333456789999999999999 987766643
|
|
| >PLN02244 tocopherol O-methyltransferase | Back alignment and domain information |
|---|
Probab=98.67 E-value=9.4e-07 Score=87.65 Aligned_cols=157 Identities=15% Similarity=0.150 Sum_probs=91.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHH---HhhCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILR---KQLGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~---~~~~~~~~~ 126 (370)
..-+|+|+|||+|.++..+. +++ ..+|+--|+. +....... ...+...
T Consensus 118 ~~~~VLDiGCG~G~~~~~La--------~~~--------g~~v~gvD~s-----------~~~i~~a~~~~~~~g~~~-- 168 (340)
T PLN02244 118 RPKRIVDVGCGIGGSSRYLA--------RKY--------GANVKGITLS-----------PVQAARANALAAAQGLSD-- 168 (340)
T ss_pred CCCeEEEecCCCCHHHHHHH--------Hhc--------CCEEEEEECC-----------HHHHHHHHHHHHhcCCCC--
Confidence 45789999999999988766 221 1456666653 22111111 1112110
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
+-.|..+ ++.+--||++++|+++|..++|++.+. ..+|+.-.+
T Consensus 169 -~v~~~~~---D~~~~~~~~~~FD~V~s~~~~~h~~d~---------------------------------~~~l~e~~r 211 (340)
T PLN02244 169 -KVSFQVA---DALNQPFEDGQFDLVWSMESGEHMPDK---------------------------------RKFVQELAR 211 (340)
T ss_pred -ceEEEEc---CcccCCCCCCCccEEEECCchhccCCH---------------------------------HHHHHHHHH
Confidence 2245444 665545789999999999999885321 125666678
Q ss_pred hhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEE
Q 017514 207 ELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHL 286 (370)
Q Consensus 207 EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~l 286 (370)
-|+|||++++......+..+.... +...-...+..+. ..+.+| ...+.+|+...+++.| |...+.
T Consensus 212 vLkpGG~lvi~~~~~~~~~~~~~~---l~~~~~~~~~~i~----------~~~~~p-~~~s~~~~~~~l~~aG-f~~v~~ 276 (340)
T PLN02244 212 VAAPGGRIIIVTWCHRDLEPGETS---LKPDEQKLLDKIC----------AAYYLP-AWCSTSDYVKLAESLG-LQDIKT 276 (340)
T ss_pred HcCCCcEEEEEEeccccccccccc---CCHHHHHHHHHHH----------hhccCC-CCCCHHHHHHHHHHCC-CCeeEe
Confidence 899999999987655433221111 0001111222221 122344 2358999999999999 877554
Q ss_pred E
Q 017514 287 E 287 (370)
Q Consensus 287 e 287 (370)
+
T Consensus 277 ~ 277 (340)
T PLN02244 277 E 277 (340)
T ss_pred e
Confidence 4
|
|
| >PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=4e-07 Score=86.36 Aligned_cols=162 Identities=19% Similarity=0.295 Sum_probs=95.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHh---hCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQ---LGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~---~~~~~~~ 126 (370)
...+|+|+|||+|..+..+. +. ..+|+..|+- +......++. .+...
T Consensus 44 ~~~~vLDiGcG~G~~a~~la--------~~---------g~~v~~vD~s-----------~~~l~~a~~~~~~~g~~~-- 93 (255)
T PRK11036 44 RPLRVLDAGGGEGQTAIKLA--------EL---------GHQVILCDLS-----------AEMIQRAKQAAEAKGVSD-- 93 (255)
T ss_pred CCCEEEEeCCCchHHHHHHH--------Hc---------CCEEEEEECC-----------HHHHHHHHHHHHhcCCcc--
Confidence 45799999999999887665 21 1567888874 3332222211 12110
Q ss_pred CCceEEeecCCCcccc-cCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGR-LFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRS 205 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~-l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra 205 (370)
+-.|+.+ ++.+- -++++++|++++..+|||+.. |. .+|+.-+
T Consensus 94 -~v~~~~~---d~~~l~~~~~~~fD~V~~~~vl~~~~~-~~--------------------------------~~l~~~~ 136 (255)
T PRK11036 94 -NMQFIHC---AAQDIAQHLETPVDLILFHAVLEWVAD-PK--------------------------------SVLQTLW 136 (255)
T ss_pred -ceEEEEc---CHHHHhhhcCCCCCEEEehhHHHhhCC-HH--------------------------------HHHHHHH
Confidence 1134443 44321 146789999999999999764 21 1455557
Q ss_pred HhhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEE
Q 017514 206 EELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDH 285 (370)
Q Consensus 206 ~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~ 285 (370)
+-|+|||++++.+...... .+-.++..-|. .+..|+...+.. . -.|.+..+++++.+.+++.| |++++
T Consensus 137 ~~LkpgG~l~i~~~n~~~~--------~~~~~~~~~~~-~~~~~~~~~~~~-~-~~p~~~~~~~~l~~~l~~aG-f~~~~ 204 (255)
T PRK11036 137 SVLRPGGALSLMFYNANGL--------LMHNMVAGNFD-YVQAGMPKRKKR-T-LSPDYPLDPEQVYQWLEEAG-WQIMG 204 (255)
T ss_pred HHcCCCeEEEEEEECccHH--------HHHHHHccChH-HHHhcCcccccc-C-CCCCCCCCHHHHHHHHHHCC-CeEee
Confidence 7899999999887653211 01111111111 122333222111 1 23667789999999999999 99877
Q ss_pred EEEEe
Q 017514 286 LEVSE 290 (370)
Q Consensus 286 le~~~ 290 (370)
..-+.
T Consensus 205 ~~gi~ 209 (255)
T PRK11036 205 KTGVR 209 (255)
T ss_pred eeeEE
Confidence 66554
|
|
| >PRK08317 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=4.3e-06 Score=76.87 Aligned_cols=221 Identities=17% Similarity=0.175 Sum_probs=117.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHh-hCCCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQ-LGSASGAAG 128 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~-~~~~~~~~~ 128 (370)
...+|+|+|||+|..+..+. +.+ + |..+++.-|+. +.......+. ..... .
T Consensus 19 ~~~~vLdiG~G~G~~~~~~a--------~~~---~---~~~~v~~~d~~-----------~~~~~~a~~~~~~~~~---~ 70 (241)
T PRK08317 19 PGDRVLDVGCGPGNDARELA--------RRV---G---PEGRVVGIDRS-----------EAMLALAKERAAGLGP---N 70 (241)
T ss_pred CCCEEEEeCCCCCHHHHHHH--------Hhc---C---CCcEEEEEeCC-----------HHHHHHHHHHhhCCCC---c
Confidence 45799999999998777555 221 1 34678888874 2211111111 01110 2
Q ss_pred ceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
-.|..+ ++...-++++++|++++..++||+.+ | ..+|+.-.+-|
T Consensus 71 ~~~~~~---d~~~~~~~~~~~D~v~~~~~~~~~~~-~--------------------------------~~~l~~~~~~L 114 (241)
T PRK08317 71 VEFVRG---DADGLPFPDGSFDAVRSDRVLQHLED-P--------------------------------ARALAEIARVL 114 (241)
T ss_pred eEEEec---ccccCCCCCCCceEEEEechhhccCC-H--------------------------------HHHHHHHHHHh
Confidence 234433 54444467889999999999999754 2 12566778899
Q ss_pred ccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEE
Q 017514 209 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEV 288 (370)
Q Consensus 209 ~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~ 288 (370)
+|||.+++....-+...... .....+..+.+.|.. .+.-| .+..++...+++.| |+..+++.
T Consensus 115 ~~gG~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-------------~~~~~---~~~~~~~~~l~~aG-f~~~~~~~ 176 (241)
T PRK08317 115 RPGGRVVVLDTDWDTLVWHS-GDRALMRKILNFWSD-------------HFADP---WLGRRLPGLFREAG-LTDIEVEP 176 (241)
T ss_pred cCCcEEEEEecCCCceeecC-CChHHHHHHHHHHHh-------------cCCCC---cHHHHHHHHHHHcC-CCceeEEE
Confidence 99999998865322111000 011122222233321 11111 24568999999999 98877777
Q ss_pred EeecccccccCccccccccccccccchhhhhhHhhhhhHHHHhhChhHHHHHHHHHHHHHHhhhhhcCC-cEEEEEEEEE
Q 017514 289 SEVNWNAYQNGFKFNEAVDAFNDGGYNVANCMRAVAEPLLVSQFGEAIIDELFKRYREIVADRMSKEKT-KFINVTVSLT 367 (370)
Q Consensus 289 ~~~~w~~~~~~~~~~D~~~~~~~~a~~~a~~~RA~~epll~~hfg~~i~Delf~r~~~~v~~~~~~~~~-~~~~~~~~L~ 367 (370)
....+..... ......+....+.+.+ ..-..++-+++++..+++... .... -++.+++...
T Consensus 177 ~~~~~~~~~~-----------~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~~ 238 (241)
T PRK08317 177 YTLIETDLKE-----------ADKGFGLIRAARRAVE---AGGISADEADAWLADLAQLAR----AGEFFFSVTGFLVVG 238 (241)
T ss_pred EEEeccCcch-----------hhHHHHHHHHHHHHHH---cCCCCHHHHHHHHHHHHHHHh----cCCEEEEEEEEEEEE
Confidence 6544322111 1112233333333322 122234455666665555432 2222 2367777777
Q ss_pred ecC
Q 017514 368 KIG 370 (370)
Q Consensus 368 r~~ 370 (370)
||+
T Consensus 239 ~kp 241 (241)
T PRK08317 239 RKP 241 (241)
T ss_pred eCC
Confidence 775
|
|
| >COG4106 Tam Trans-aconitate methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.3e-06 Score=80.64 Aligned_cols=220 Identities=18% Similarity=0.297 Sum_probs=132.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
.+-+|+|+|||.|..|-++. +++ |.-++.--|-. +.+..+-... .. .-
T Consensus 30 ~~~~v~DLGCGpGnsTelL~--------~Rw-------P~A~i~GiDsS-----------~~Mla~Aa~r-lp-----~~ 77 (257)
T COG4106 30 RPRRVVDLGCGPGNSTELLA--------RRW-------PDAVITGIDSS-----------PAMLAKAAQR-LP-----DA 77 (257)
T ss_pred ccceeeecCCCCCHHHHHHH--------HhC-------CCCeEeeccCC-----------HHHHHHHHHh-CC-----CC
Confidence 57899999999999998887 665 56777776754 5544433222 11 12
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
.|.-| +- ...-|+...|++||+.+||||.+=|. .|..=-.+|.
T Consensus 78 ~f~~a---Dl-~~w~p~~~~dllfaNAvlqWlpdH~~---------------------------------ll~rL~~~L~ 120 (257)
T COG4106 78 TFEEA---DL-RTWKPEQPTDLLFANAVLQWLPDHPE---------------------------------LLPRLVSQLA 120 (257)
T ss_pred ceecc---cH-hhcCCCCccchhhhhhhhhhccccHH---------------------------------HHHHHHHhhC
Confidence 44333 33 45679999999999999999544332 2334457899
Q ss_pred cCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCc-CcccCCHHHHHHHHHhcCceEEEEEEE
Q 017514 210 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNI-PQYTPSPAEIKSEVIKEGSFTIDHLEV 288 (370)
Q Consensus 210 ~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~-P~y~~s~eE~~~~ie~~GsF~i~~le~ 288 (370)
|||.|.+.+++--++ | -+.++. +.++++=- +.++..+.. =---+|+.-+-.++...+ =+|+--++
T Consensus 121 Pgg~LAVQmPdN~de-p-------sH~~mr----~~A~~~p~-~~~l~~~~~~r~~v~s~a~Yy~lLa~~~-~rvDiW~T 186 (257)
T COG4106 121 PGGVLAVQMPDNLDE-P-------SHRLMR----ETADEAPF-AQELGGRGLTRAPLPSPAAYYELLAPLA-CRVDIWHT 186 (257)
T ss_pred CCceEEEECCCccCc-h-------hHHHHH----HHHhcCch-hhhhCccccccCCCCCHHHHHHHhCccc-ceeeeeee
Confidence 999999999864432 1 122222 22222211 111222111 111346777777776655 23322222
Q ss_pred EeecccccccCccccccccccccccchhhhhhHhhhh-hHHHHhhChhHHHHHHHHHHHHHHhhhhh-cCC----cEEEE
Q 017514 289 SEVNWNAYQNGFKFNEAVDAFNDGGYNVANCMRAVAE-PLLVSQFGEAIIDELFKRYREIVADRMSK-EKT----KFINV 362 (370)
Q Consensus 289 ~~~~w~~~~~~~~~~D~~~~~~~~a~~~a~~~RA~~e-pll~~hfg~~i~Delf~r~~~~v~~~~~~-~~~----~~~~~ 362 (370)
. + ++. -..+..+..|+++..- |.|.. ++++-...+.++|..++.+.+-. ... .|.-+
T Consensus 187 ~---Y--~h~-----------l~~a~aIvdWvkgTgLrP~L~~-L~e~~~~~FL~~Y~~~l~~aYP~~~dGr~ll~FpRl 249 (257)
T COG4106 187 T---Y--YHQ-----------LPGADAIVDWVKGTGLRPYLDR-LDEEERQRFLDRYLALLAEAYPPRADGRVLLAFPRL 249 (257)
T ss_pred e---c--ccc-----------CCCccchhhheeccccceeccc-cCHHHHHHHHHHHHHHHHHhCCCccCCcEEeecceE
Confidence 2 1 111 1235677888876544 77776 89999999999999999987643 222 35566
Q ss_pred EEEEEec
Q 017514 363 TVSLTKI 369 (370)
Q Consensus 363 ~~~L~r~ 369 (370)
+++-+|+
T Consensus 250 FiVA~~~ 256 (257)
T COG4106 250 FIVATRG 256 (257)
T ss_pred EEEEecC
Confidence 6666664
|
|
| >PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.62 E-value=7.3e-07 Score=82.42 Aligned_cols=173 Identities=16% Similarity=0.208 Sum_probs=96.2
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCC-CCCCCCc
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGS-ASGAAGQ 129 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~-~~~~~~~ 129 (370)
..+|+|+|||+|..+..+. +.+ ++..+++..|+. +.......+.... .. ..+-
T Consensus 52 ~~~vldiG~G~G~~~~~l~--------~~~------~~~~~v~~~D~s-----------~~~~~~a~~~~~~~~~-~~~~ 105 (239)
T PRK00216 52 GDKVLDLACGTGDLAIALA--------KAV------GKTGEVVGLDFS-----------EGMLAVGREKLRDLGL-SGNV 105 (239)
T ss_pred CCeEEEeCCCCCHHHHHHH--------HHc------CCCCeEEEEeCC-----------HHHHHHHHHhhccccc-ccCe
Confidence 4799999999999887665 321 124788899985 2221111111110 00 0012
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
.|.. +++.+..++++++|++++++++|++.+.+ .+|+...+-|+
T Consensus 106 ~~~~---~d~~~~~~~~~~~D~I~~~~~l~~~~~~~---------------------------------~~l~~~~~~L~ 149 (239)
T PRK00216 106 EFVQ---GDAEALPFPDNSFDAVTIAFGLRNVPDID---------------------------------KALREMYRVLK 149 (239)
T ss_pred EEEe---cccccCCCCCCCccEEEEecccccCCCHH---------------------------------HHHHHHHHhcc
Confidence 3333 36655556788999999999999865422 25677788899
Q ss_pred cCceEEEEeeccCCCCCCCchhhhHHHHHHH-H---HHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEE
Q 017514 210 AEGRMVLTFLGRKSQDPSSKECCYIWELLAT-A---LNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDH 285 (370)
Q Consensus 210 ~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~-a---l~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~ 285 (370)
|||++++.-...+.... ....++.... . ...+........+.+. +.--.+++.+|+...+++.| |++.+
T Consensus 150 ~gG~li~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~aG-f~~~~ 222 (239)
T PRK00216 150 PGGRLVILEFSKPTNPP----LKKAYDFYLFKVLPLIGKLISKNAEAYSYLA--ESIRAFPDQEELAAMLEEAG-FERVR 222 (239)
T ss_pred CCcEEEEEEecCCCchH----HHHHHHHHHHhhhHHHHHHHcCCcHHHHHHH--HHHHhCCCHHHHHHHHHhCC-Cceee
Confidence 99999887665443211 0111111100 0 1111111100000000 00023579999999999999 98877
Q ss_pred EEEEeec
Q 017514 286 LEVSEVN 292 (370)
Q Consensus 286 le~~~~~ 292 (370)
...+...
T Consensus 223 ~~~~~~~ 229 (239)
T PRK00216 223 YRNLTGG 229 (239)
T ss_pred eeeeecC
Confidence 7765433
|
|
| >PF13489 Methyltransf_23: Methyltransferase domain; PDB: 3JWJ_A 3JWH_B 2AOV_B 2AOT_A 1JQD_B 2AOX_A 1JQE_A 2AOU_B 2AOW_A 3DLI_C | Back alignment and domain information |
|---|
Probab=98.61 E-value=5.3e-07 Score=78.03 Aligned_cols=138 Identities=23% Similarity=0.253 Sum_probs=88.2
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (370)
+...+|+|+|||.|.++..+. +. + .++...|.- +..... . .
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~--------~~--------~-~~~~g~D~~-----------~~~~~~------~-----~ 61 (161)
T PF13489_consen 21 KPGKRVLDIGCGTGSFLRALA--------KR--------G-FEVTGVDIS-----------PQMIEK------R-----N 61 (161)
T ss_dssp TTTSEEEEESSTTSHHHHHHH--------HT--------T-SEEEEEESS-----------HHHHHH------T-----T
T ss_pred CCCCEEEEEcCCCCHHHHHHH--------Hh--------C-CEEEEEECC-----------HHHHhh------h-----h
Confidence 456899999999997755443 22 2 488888874 322111 0 0
Q ss_pred ceEEeecCCCcc--cccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 129 QCFFTGVPGSFY--GRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 129 ~~f~~~vpgSFy--~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
..+. .|. ...+|++++|+++|+.+|||+.. | ..+|+.-.+
T Consensus 62 ~~~~-----~~~~~~~~~~~~~fD~i~~~~~l~~~~d-~--------------------------------~~~l~~l~~ 103 (161)
T PF13489_consen 62 VVFD-----NFDAQDPPFPDGSFDLIICNDVLEHLPD-P--------------------------------EEFLKELSR 103 (161)
T ss_dssp SEEE-----EEECHTHHCHSSSEEEEEEESSGGGSSH-H--------------------------------HHHHHHHHH
T ss_pred hhhh-----hhhhhhhhccccchhhHhhHHHHhhccc-H--------------------------------HHHHHHHHH
Confidence 1111 121 44568899999999999999764 2 236778889
Q ss_pred hhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEE
Q 017514 207 ELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDH 285 (370)
Q Consensus 207 EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~ 285 (370)
=|+|||++++..+.+... ....+..+ ...... . --..+.+.++++..+++.| |+|.+
T Consensus 104 ~LkpgG~l~~~~~~~~~~-------------~~~~~~~~---~~~~~~---~--~~~~~~~~~~~~~ll~~~G-~~iv~ 160 (161)
T PF13489_consen 104 LLKPGGYLVISDPNRDDP-------------SPRSFLKW---RYDRPY---G--GHVHFFSPDELRQLLEQAG-FEIVE 160 (161)
T ss_dssp CEEEEEEEEEEEEBTTSH-------------HHHHHHHC---CGTCHH---T--TTTEEBBHHHHHHHHHHTT-EEEEE
T ss_pred hcCCCCEEEEEEcCCcch-------------hhhHHHhc---CCcCcc---C--ceeccCCHHHHHHHHHHCC-CEEEE
Confidence 999999999999987531 11111111 110110 0 1126669999999999999 88754
|
... |
| >PLN02396 hexaprenyldihydroxybenzoate methyltransferase | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.5e-06 Score=85.70 Aligned_cols=157 Identities=14% Similarity=0.090 Sum_probs=91.8
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCce
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (370)
..+|+|+|||.|..+..+. + +..+|+.-|.- +...+.............+-.
T Consensus 132 g~~ILDIGCG~G~~s~~La--------~---------~g~~V~GID~s-----------~~~i~~Ar~~~~~~~~~~~i~ 183 (322)
T PLN02396 132 GLKFIDIGCGGGLLSEPLA--------R---------MGATVTGVDAV-----------DKNVKIARLHADMDPVTSTIE 183 (322)
T ss_pred CCEEEEeeCCCCHHHHHHH--------H---------cCCEEEEEeCC-----------HHHHHHHHHHHHhcCccccee
Confidence 4699999999999876444 2 12577777875 222221111111000000123
Q ss_pred EEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 017514 131 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 210 (370)
Q Consensus 131 f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~ 210 (370)
|..+ ++.+--++++++|++++..+|||+.+.+ .||+.-++-|+|
T Consensus 184 ~~~~---dae~l~~~~~~FD~Vi~~~vLeHv~d~~---------------------------------~~L~~l~r~LkP 227 (322)
T PLN02396 184 YLCT---TAEKLADEGRKFDAVLSLEVIEHVANPA---------------------------------EFCKSLSALTIP 227 (322)
T ss_pred EEec---CHHHhhhccCCCCEEEEhhHHHhcCCHH---------------------------------HHHHHHHHHcCC
Confidence 4333 5532224678999999999999966521 277777888999
Q ss_pred CceEEEEeeccCCCCCCCchhhhHHHHH--HHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEE
Q 017514 211 EGRMVLTFLGRKSQDPSSKECCYIWELL--ATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEV 288 (370)
Q Consensus 211 GG~lvl~~~g~~~~~~~~~~~~~~~~~l--~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~ 288 (370)
||++++..+.+... ..+..+ ..-+...+..| ......+.+++|+...+++.| |++..+.-
T Consensus 228 GG~liist~nr~~~--------~~~~~i~~~eyi~~~lp~g---------th~~~~f~tp~eL~~lL~~aG-f~i~~~~G 289 (322)
T PLN02396 228 NGATVLSTINRTMR--------AYASTIVGAEYILRWLPKG---------THQWSSFVTPEELSMILQRAS-VDVKEMAG 289 (322)
T ss_pred CcEEEEEECCcCHH--------HHHHhhhhHHHHHhcCCCC---------CcCccCCCCHHHHHHHHHHcC-CeEEEEee
Confidence 99999998754311 011111 11111111122 011224789999999999999 88877764
Q ss_pred E
Q 017514 289 S 289 (370)
Q Consensus 289 ~ 289 (370)
+
T Consensus 290 ~ 290 (322)
T PLN02396 290 F 290 (322)
T ss_pred e
Confidence 4
|
|
| >PRK15451 tRNA cmo(5)U34 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=2.5e-06 Score=80.72 Aligned_cols=161 Identities=19% Similarity=0.218 Sum_probs=95.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhh---CCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL---GSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~---~~~~~~ 126 (370)
..-+|+|+|||+|.+++.+. +.. ..|..+++.-|+- +...+.-++.. +...
T Consensus 56 ~~~~vLDlGcGtG~~~~~l~--------~~~-----~~~~~~v~gvD~S-----------~~ml~~A~~~~~~~~~~~-- 109 (247)
T PRK15451 56 PGTQVYDLGCSLGAATLSVR--------RNI-----HHDNCKIIAIDNS-----------PAMIERCRRHIDAYKAPT-- 109 (247)
T ss_pred CCCEEEEEcccCCHHHHHHH--------Hhc-----CCCCCeEEEEeCC-----------HHHHHHHHHHHHhcCCCC--
Confidence 45789999999999877655 211 1245788888874 44333222221 1110
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
+-.| +.+++.+ + |....|+++++.++||++. + +...+|+.-++
T Consensus 110 -~v~~---~~~d~~~-~-~~~~~D~vv~~~~l~~l~~-~------------------------------~~~~~l~~i~~ 152 (247)
T PRK15451 110 -PVDV---IEGDIRD-I-AIENASMVVLNFTLQFLEP-S------------------------------ERQALLDKIYQ 152 (247)
T ss_pred -CeEE---EeCChhh-C-CCCCCCEEehhhHHHhCCH-H------------------------------HHHHHHHHHHH
Confidence 1133 3346633 2 3345899999999999753 1 12236777788
Q ss_pred hhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccC----CcCcccCCHHHHHHHHHhcCce
Q 017514 207 ELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCF----NIPQYTPSPAEIKSEVIKEGSF 281 (370)
Q Consensus 207 EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f----~~P~y~~s~eE~~~~ie~~GsF 281 (370)
-|+|||.+++.-.-..+... ..+.+...|.++....=.+++++..+ .--...-|+++..+.+++.| |
T Consensus 153 ~LkpGG~l~l~e~~~~~~~~-------~~~~~~~~~~~~~~~~g~s~~ei~~~~~~~~~~~~~~~~~~~~~~L~~aG-F 223 (247)
T PRK15451 153 GLNPGGALVLSEKFSFEDAK-------VGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARLHKAG-F 223 (247)
T ss_pred hcCCCCEEEEEEecCCCcch-------hHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHcC-c
Confidence 99999999997533322211 12334445555544444555555331 11122258999999999999 6
|
|
| >PRK06202 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=7e-06 Score=76.66 Aligned_cols=168 Identities=14% Similarity=0.161 Sum_probs=89.9
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (370)
++..+|+|+|||+|.++..+. +..++ ..|..+|+..|+- +.....-.+..... +
T Consensus 59 ~~~~~iLDlGcG~G~~~~~L~----~~~~~-------~g~~~~v~gvD~s-----------~~~l~~a~~~~~~~----~ 112 (232)
T PRK06202 59 DRPLTLLDIGCGGGDLAIDLA----RWARR-------DGLRLEVTAIDPD-----------PRAVAFARANPRRP----G 112 (232)
T ss_pred CCCcEEEEeccCCCHHHHHHH----HHHHh-------CCCCcEEEEEcCC-----------HHHHHHHHhccccC----C
Confidence 456899999999999877554 11211 1134789999985 33332222211110 1
Q ss_pred ceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
--+..+....+ -++++++|+++|+.+|||+.. | ++..+|+.-++-+
T Consensus 113 ~~~~~~~~~~l---~~~~~~fD~V~~~~~lhh~~d-~------------------------------~~~~~l~~~~r~~ 158 (232)
T PRK06202 113 VTFRQAVSDEL---VAEGERFDVVTSNHFLHHLDD-A------------------------------EVVRLLADSAALA 158 (232)
T ss_pred CeEEEEecccc---cccCCCccEEEECCeeecCCh-H------------------------------HHHHHHHHHHHhc
Confidence 12333322222 126789999999999999754 1 1222444444444
Q ss_pred ccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcC-CcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEE
Q 017514 209 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEG-LIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLE 287 (370)
Q Consensus 209 ~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG-~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le 287 (370)
+ |.+++.-+.++.. .+.... ........| .+..+. ...-.-+++.+|+.+.+++ | |++.+.-
T Consensus 159 ~--~~~~i~dl~~~~~---------~~~~~~-~~~~~~~~~~~~~~d~---~~s~~~~~~~~el~~ll~~-G-f~~~~~~ 221 (232)
T PRK06202 159 R--RLVLHNDLIRSRL---------AYALFW-AGTRLLSRSSFVHTDG---LLSVRRSYTPAELAALAPQ-G-WRVERQW 221 (232)
T ss_pred C--eeEEEeccccCHH---------HHHHHH-HHHHHhccCceeeccc---hHHHHhhcCHHHHHHHhhC-C-CeEEecc
Confidence 4 5555555555421 111111 111111112 222222 2222347899999999998 7 9988776
Q ss_pred EEeecc
Q 017514 288 VSEVNW 293 (370)
Q Consensus 288 ~~~~~w 293 (370)
.+...|
T Consensus 222 ~~~~~~ 227 (232)
T PRK06202 222 PFRYLL 227 (232)
T ss_pred ceeeEE
Confidence 665443
|
|
| >COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.5e-06 Score=82.06 Aligned_cols=169 Identities=22% Similarity=0.315 Sum_probs=103.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
+..+|+|+|||+|--++.+. +.. | .-+|+.-|.. +.+..--+++... .+...-
T Consensus 51 ~g~~vLDva~GTGd~a~~~~--------k~~---g----~g~v~~~D~s-----------~~ML~~a~~k~~~-~~~~~i 103 (238)
T COG2226 51 PGDKVLDVACGTGDMALLLA--------KSV---G----TGEVVGLDIS-----------ESMLEVAREKLKK-KGVQNV 103 (238)
T ss_pred CCCEEEEecCCccHHHHHHH--------Hhc---C----CceEEEEECC-----------HHHHHHHHHHhhc-cCccce
Confidence 46999999999999888776 432 1 4788888875 3332222222111 000012
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
.|+.| +.-+=-||++|+|++.+++.||++.+.+. .|+--++=|+
T Consensus 104 ~fv~~---dAe~LPf~D~sFD~vt~~fglrnv~d~~~---------------------------------aL~E~~RVlK 147 (238)
T COG2226 104 EFVVG---DAENLPFPDNSFDAVTISFGLRNVTDIDK---------------------------------ALKEMYRVLK 147 (238)
T ss_pred EEEEe---chhhCCCCCCccCEEEeeehhhcCCCHHH---------------------------------HHHHHHHhhc
Confidence 45665 77555579999999999999999777543 3556678999
Q ss_pred cCceEEEEeeccCCCCCCCchhh-hHHHHHHHHHHHHHhcCCcchhhhc-cCCcCcccCCHHHHHHHHHhcCceEEEE
Q 017514 210 AEGRMVLTFLGRKSQDPSSKECC-YIWELLATALNNMVSEGLIEEEKVN-CFNIPQYTPSPAEIKSEVIKEGSFTIDH 285 (370)
Q Consensus 210 ~GG~lvl~~~g~~~~~~~~~~~~-~~~~~l~~al~~mv~eG~i~~e~~d-~f~~P~y~~s~eE~~~~ie~~GsF~i~~ 285 (370)
|||++++.=++.++..+...... ..+..+--.+-.++.++ .+++. -....--+|+.+++...+++.| |+...
T Consensus 148 pgG~~~vle~~~p~~~~~~~~~~~~~~~~v~P~~g~~~~~~---~~~y~yL~eSi~~~p~~~~l~~~~~~~g-f~~i~ 221 (238)
T COG2226 148 PGGRLLVLEFSKPDNPVLRKAYILYYFKYVLPLIGKLVAKD---AEAYEYLAESIRRFPDQEELKQMIEKAG-FEEVR 221 (238)
T ss_pred CCeEEEEEEcCCCCchhhHHHHHHHHHHhHhhhhceeeecC---hHHHHHHHHHHHhCCCHHHHHHHHHhcC-ceEEe
Confidence 99999999888876543221111 11111111222222111 12222 2234456899999999999999 76544
|
|
| >PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=98.52 E-value=7.7e-07 Score=69.81 Aligned_cols=95 Identities=28% Similarity=0.338 Sum_probs=63.1
Q ss_pred EeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCceEEee
Q 017514 55 ADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTG 134 (370)
Q Consensus 55 aD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~f~~~ 134 (370)
+|+|||+|.++..+. ++ +..+|+-.|.- +......++..... ...+..+
T Consensus 1 LdiG~G~G~~~~~l~--------~~--------~~~~v~~~D~~-----------~~~~~~~~~~~~~~----~~~~~~~ 49 (95)
T PF08241_consen 1 LDIGCGTGRFAAALA--------KR--------GGASVTGIDIS-----------EEMLEQARKRLKNE----GVSFRQG 49 (95)
T ss_dssp EEET-TTSHHHHHHH--------HT--------TTCEEEEEES------------HHHHHHHHHHTTTS----TEEEEES
T ss_pred CEecCcCCHHHHHHH--------hc--------cCCEEEEEeCC-----------HHHHHHHHhccccc----Cchheee
Confidence 699999999988777 32 23788888875 33333333322221 2235444
Q ss_pred cCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceE
Q 017514 135 VPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRM 214 (370)
Q Consensus 135 vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~l 214 (370)
++..--||++|+|++++..++||+ + |...+|+.-.+-|+|||++
T Consensus 50 ---d~~~l~~~~~sfD~v~~~~~~~~~---~------------------------------~~~~~l~e~~rvLk~gG~l 93 (95)
T PF08241_consen 50 ---DAEDLPFPDNSFDVVFSNSVLHHL---E------------------------------DPEAALREIYRVLKPGGRL 93 (95)
T ss_dssp ---BTTSSSS-TT-EEEEEEESHGGGS---S------------------------------HHHHHHHHHHHHEEEEEEE
T ss_pred ---hHHhCccccccccccccccceeec---c------------------------------CHHHHHHHHHHHcCcCeEE
Confidence 776667799999999999999997 2 2233777889999999999
Q ss_pred EE
Q 017514 215 VL 216 (370)
Q Consensus 215 vl 216 (370)
++
T Consensus 94 ~~ 95 (95)
T PF08241_consen 94 VI 95 (95)
T ss_dssp EE
T ss_pred eC
Confidence 86
|
The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B .... |
| >PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.5e-05 Score=80.42 Aligned_cols=200 Identities=14% Similarity=0.199 Sum_probs=119.5
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCce
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (370)
..+|+|+|||+|..++.+. +.+ ..+|+--|+- +...+...+.. ... .-.
T Consensus 168 g~rVLDIGcG~G~~a~~la--------~~~--------g~~V~giDlS-----------~~~l~~A~~~~-~~l---~v~ 216 (383)
T PRK11705 168 GMRVLDIGCGWGGLARYAA--------EHY--------GVSVVGVTIS-----------AEQQKLAQERC-AGL---PVE 216 (383)
T ss_pred CCEEEEeCCCccHHHHHHH--------HHC--------CCEEEEEeCC-----------HHHHHHHHHHh-ccC---eEE
Confidence 4699999999999887664 221 2567777774 32222221211 111 111
Q ss_pred EEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 017514 131 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 210 (370)
Q Consensus 131 f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~ 210 (370)
+ ..+++ ..+ ++++|.++|...++|+ +. +++..+|+.-.+-|+|
T Consensus 217 ~---~~~D~-~~l--~~~fD~Ivs~~~~ehv---g~----------------------------~~~~~~l~~i~r~Lkp 259 (383)
T PRK11705 217 I---RLQDY-RDL--NGQFDRIVSVGMFEHV---GP----------------------------KNYRTYFEVVRRCLKP 259 (383)
T ss_pred E---EECch-hhc--CCCCCEEEEeCchhhC---Ch----------------------------HHHHHHHHHHHHHcCC
Confidence 2 22344 333 5789999999988884 21 2344577778899999
Q ss_pred CceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCc-ccCCHHHHHHHHHhcCceEEEEEEEE
Q 017514 211 EGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQ-YTPSPAEIKSEVIKEGSFTIDHLEVS 289 (370)
Q Consensus 211 GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~-y~~s~eE~~~~ie~~GsF~i~~le~~ 289 (370)
||++++...+.+..... . ..-++.+.+|- +.|+.+++....+ .| |+|..++.+
T Consensus 260 GG~lvl~~i~~~~~~~~--~----------------------~~~i~~yifp~g~lps~~~i~~~~~-~~-~~v~d~~~~ 313 (383)
T PRK11705 260 DGLFLLHTIGSNKTDTN--V----------------------DPWINKYIFPNGCLPSVRQIAQASE-GL-FVMEDWHNF 313 (383)
T ss_pred CcEEEEEEccCCCCCCC--C----------------------CCCceeeecCCCcCCCHHHHHHHHH-CC-cEEEEEecC
Confidence 99999998876643110 0 01133455663 6889999999877 35 888777644
Q ss_pred eecccccccCccccccccccccccchhhhhhHhhhhh--HHHHhhChhHHHHHHHHHHHHHHhhhhhcCCcEEEEEE
Q 017514 290 EVNWNAYQNGFKFNEAVDAFNDGGYNVANCMRAVAEP--LLVSQFGEAIIDELFKRYREIVADRMSKEKTKFINVTV 364 (370)
Q Consensus 290 ~~~w~~~~~~~~~~D~~~~~~~~a~~~a~~~RA~~ep--ll~~hfg~~i~Delf~r~~~~v~~~~~~~~~~~~~~~~ 364 (370)
. ..|++++..|.+.+... -+.+-+|++. -.+|..|-.-.+..+........++++
T Consensus 314 ~-------------------~hy~~TL~~W~~~f~~~~~~~~~~~~~~~-~r~w~~yl~~~~~~F~~~~~~~~q~~~ 370 (383)
T PRK11705 314 G-------------------ADYDRTLMAWHENFEAAWPELADNYSERF-YRMWRYYLLSCAGAFRARDIQLWQVVF 370 (383)
T ss_pred h-------------------hhHHHHHHHHHHHHHHHHHHHHHhCCHHH-HHHHHHHHHHHHHHHhCCCceEEEEEE
Confidence 2 12344444444433321 1233455544 345777777777777777777666543
|
|
| >TIGR00452 methyltransferase, putative | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.6e-06 Score=85.16 Aligned_cols=153 Identities=21% Similarity=0.203 Sum_probs=89.7
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCce
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (370)
.-+|+|+|||+|..+..++ .. | + -.|+--|.. -.|-.-|+.+. +..+.. ..+
T Consensus 122 g~~VLDvGCG~G~~~~~~~--------~~----g---~-~~v~GiDpS-~~ml~q~~~~~-------~~~~~~----~~v 173 (314)
T TIGR00452 122 GRTILDVGCGSGYHMWRML--------GH----G---A-KSLVGIDPT-VLFLCQFEAVR-------KLLDND----KRA 173 (314)
T ss_pred CCEEEEeccCCcHHHHHHH--------Hc----C---C-CEEEEEcCC-HHHHHHHHHHH-------HHhccC----CCe
Confidence 4699999999999876554 21 1 2 245555642 11211111111 111111 122
Q ss_pred EEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 017514 131 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 210 (370)
Q Consensus 131 f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~ 210 (370)
.+ .++++ +.+.+.+++|.++|+.+|||+.. |. .+|+.-++-|+|
T Consensus 174 ~~--~~~~i-e~lp~~~~FD~V~s~gvL~H~~d-p~--------------------------------~~L~el~r~Lkp 217 (314)
T TIGR00452 174 IL--EPLGI-EQLHELYAFDTVFSMGVLYHRKS-PL--------------------------------EHLKQLKHQLVI 217 (314)
T ss_pred EE--EECCH-HHCCCCCCcCEEEEcchhhccCC-HH--------------------------------HHHHHHHHhcCC
Confidence 11 23344 56666679999999999999533 21 267777899999
Q ss_pred CceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEEE
Q 017514 211 EGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 289 (370)
Q Consensus 211 GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~ 289 (370)
||.|++..+..+..... .+ ...+.+..+.-.++.||.+++...+++.| |+..++...
T Consensus 218 GG~Lvletl~i~g~~~~---------~l------------~p~~ry~k~~nv~flpS~~~L~~~L~~aG-F~~V~i~~~ 274 (314)
T TIGR00452 218 KGELVLETLVIDGDLNT---------VL------------VPKDRYAKMKNVYFIPSVSALKNWLEKVG-FENFRILDV 274 (314)
T ss_pred CCEEEEEEEEecCcccc---------cc------------CchHHHHhccccccCCCHHHHHHHHHHCC-CeEEEEEec
Confidence 99999987654322100 00 01111223333456789999999999999 887665543
|
Known examples to date are restricted to the proteobacteria. |
| >PLN02490 MPBQ/MSBQ methyltransferase | Back alignment and domain information |
|---|
Probab=98.45 E-value=4.6e-06 Score=82.79 Aligned_cols=149 Identities=18% Similarity=0.199 Sum_probs=90.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
...+|+|+|||+|..++.+. +.. +..+++..|+. +.......++.... +-
T Consensus 113 ~~~~VLDLGcGtG~~~l~La--------~~~-------~~~~VtgVD~S-----------~~mL~~A~~k~~~~----~i 162 (340)
T PLN02490 113 RNLKVVDVGGGTGFTTLGIV--------KHV-------DAKNVTILDQS-----------PHQLAKAKQKEPLK----EC 162 (340)
T ss_pred CCCEEEEEecCCcHHHHHHH--------HHC-------CCCEEEEEECC-----------HHHHHHHHHhhhcc----CC
Confidence 34799999999999887655 221 22578888874 22222111111110 11
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
-+ +.++...--++++++|+++++.++|++.+ | ...|+.-.+-|+
T Consensus 163 ~~---i~gD~e~lp~~~~sFDvVIs~~~L~~~~d-~--------------------------------~~~L~e~~rvLk 206 (340)
T PLN02490 163 KI---IEGDAEDLPFPTDYADRYVSAGSIEYWPD-P--------------------------------QRGIKEAYRVLK 206 (340)
T ss_pred eE---EeccHHhCCCCCCceeEEEEcChhhhCCC-H--------------------------------HHHHHHHHHhcC
Confidence 23 34466444467889999999999998443 1 114667788999
Q ss_pred cCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEEE
Q 017514 210 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 289 (370)
Q Consensus 210 ~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~ 289 (370)
|||++++.-....+ .| +..-+.++ -..+++.+|+.+.+++.| |+..+++.+
T Consensus 207 PGG~LvIi~~~~p~----------~~--~~r~~~~~----------------~~~~~t~eEl~~lL~~aG-F~~V~i~~i 257 (340)
T PLN02490 207 IGGKACLIGPVHPT----------FW--LSRFFADV----------------WMLFPKEEEYIEWFTKAG-FKDVKLKRI 257 (340)
T ss_pred CCcEEEEEEecCcc----------hh--HHHHhhhh----------------hccCCCHHHHHHHHHHCC-CeEEEEEEc
Confidence 99999886332111 01 11111110 012478999999999999 988777766
Q ss_pred eecc
Q 017514 290 EVNW 293 (370)
Q Consensus 290 ~~~w 293 (370)
...|
T Consensus 258 ~~~~ 261 (340)
T PLN02490 258 GPKW 261 (340)
T ss_pred Chhh
Confidence 4444
|
|
| >smart00828 PKS_MT Methyltransferase in polyketide synthase (PKS) enzymes | Back alignment and domain information |
|---|
Probab=98.44 E-value=7.7e-06 Score=75.59 Aligned_cols=142 Identities=15% Similarity=0.177 Sum_probs=86.3
Q ss_pred EEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCCCCc
Q 017514 53 AIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGAAGQ 129 (370)
Q Consensus 53 ~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~~~~ 129 (370)
+|+|+|||+|..+..+. +.+ |..+|+--|+. +........ ..+... +-
T Consensus 2 ~vLDiGcG~G~~~~~la--------~~~-------~~~~v~gid~s-----------~~~~~~a~~~~~~~gl~~---~i 52 (224)
T smart00828 2 RVLDFGCGYGSDLIDLA--------ERH-------PHLQLHGYTIS-----------PEQAEVGRERIRALGLQG---RI 52 (224)
T ss_pred eEEEECCCCCHHHHHHH--------HHC-------CCCEEEEEECC-----------HHHHHHHHHHHHhcCCCc---ce
Confidence 69999999999876554 322 23567777763 111111111 111110 11
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
.|.. +++....+ ++++|+++|..++|++.+ +..+|+.-++-|+
T Consensus 53 ~~~~---~d~~~~~~-~~~fD~I~~~~~l~~~~~---------------------------------~~~~l~~~~~~Lk 95 (224)
T smart00828 53 RIFY---RDSAKDPF-PDTYDLVFGFEVIHHIKD---------------------------------KMDLFSNISRHLK 95 (224)
T ss_pred EEEe---cccccCCC-CCCCCEeehHHHHHhCCC---------------------------------HHHHHHHHHHHcC
Confidence 3333 24433323 468999999999999533 1236777789999
Q ss_pred cCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEEE
Q 017514 210 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 289 (370)
Q Consensus 210 ~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~ 289 (370)
|||++++.-...+...+ +.. -..+.|.++.+|+...+++.| |++.+.+.+
T Consensus 96 pgG~l~i~~~~~~~~~~------------------------~~~-----~~~~~~~~s~~~~~~~l~~~G-f~~~~~~~~ 145 (224)
T smart00828 96 DGGHLVLADFIANLLSA------------------------IEH-----EETTSYLVTREEWAELLARNN-LRVVEGVDA 145 (224)
T ss_pred CCCEEEEEEcccccCcc------------------------ccc-----cccccccCCHHHHHHHHHHCC-CeEEEeEEC
Confidence 99999987653221000 000 123456899999999999999 988777665
Q ss_pred e
Q 017514 290 E 290 (370)
Q Consensus 290 ~ 290 (370)
.
T Consensus 146 ~ 146 (224)
T smart00828 146 S 146 (224)
T ss_pred c
Confidence 3
|
|
| >TIGR01934 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis methyltransferases | Back alignment and domain information |
|---|
Probab=98.42 E-value=6.8e-06 Score=75.14 Aligned_cols=167 Identities=16% Similarity=0.194 Sum_probs=95.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
...+|+|+|||.|..+..+. +.. + +..+++.-|+. +............. .+-
T Consensus 39 ~~~~vldiG~G~G~~~~~~~--------~~~-----~-~~~~~~~iD~~-----------~~~~~~~~~~~~~~---~~i 90 (223)
T TIGR01934 39 KGQKVLDVACGTGDLAIELA--------KSA-----P-DRGKVTGVDFS-----------SEMLEVAKKKSELP---LNI 90 (223)
T ss_pred CCCeEEEeCCCCChhHHHHH--------Hhc-----C-CCceEEEEECC-----------HHHHHHHHHHhccC---CCc
Confidence 45799999999999877665 221 1 12578888874 22211111111100 022
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
.|.. +++.+-.++++++|+++++..+|++.. ...+|+.-.+-|+
T Consensus 91 ~~~~---~d~~~~~~~~~~~D~i~~~~~~~~~~~---------------------------------~~~~l~~~~~~L~ 134 (223)
T TIGR01934 91 EFIQ---ADAEALPFEDNSFDAVTIAFGLRNVTD---------------------------------IQKALREMYRVLK 134 (223)
T ss_pred eEEe---cchhcCCCCCCcEEEEEEeeeeCCccc---------------------------------HHHHHHHHHHHcC
Confidence 3433 366565577889999999999998543 1236788889999
Q ss_pred cCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHh---cCCcchhhhccCC----cCcccCCHHHHHHHHHhcCceE
Q 017514 210 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVS---EGLIEEEKVNCFN----IPQYTPSPAEIKSEVIKEGSFT 282 (370)
Q Consensus 210 ~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~---eG~i~~e~~d~f~----~P~y~~s~eE~~~~ie~~GsF~ 282 (370)
|||++++.-.......+ +..+.+.+..... .+..+.. .+.+. ...-+++.+|++..+++.| |+
T Consensus 135 ~gG~l~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~aG-f~ 204 (223)
T TIGR01934 135 PGGRLVILEFSKPANAL--------LKKFYKFYLKNVLPSIGGLISKN-AEAYTYLPESIRAFPSQEELAAMLKEAG-FE 204 (223)
T ss_pred CCcEEEEEEecCCCchh--------hHHHHHHHHHHhhhhhhhhhcCC-chhhHHHHHHHHhCCCHHHHHHHHHHcC-Cc
Confidence 99999986654332211 1122222211100 0111111 11111 0122578999999999999 98
Q ss_pred EEEEEEEe
Q 017514 283 IDHLEVSE 290 (370)
Q Consensus 283 i~~le~~~ 290 (370)
+...+.+.
T Consensus 205 ~~~~~~~~ 212 (223)
T TIGR01934 205 EVRYRSLT 212 (223)
T ss_pred cceeeeee
Confidence 87777653
|
Note that a number of non-orthologous genes which are members of pfam03737 have been erroneously annotated as MenG methyltransferases. |
| >PRK11207 tellurite resistance protein TehB; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=3.7e-06 Score=76.96 Aligned_cols=137 Identities=15% Similarity=0.171 Sum_probs=81.6
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhh-CCCCCCCCc
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAAGQ 129 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~-~~~~~~~~~ 129 (370)
..+|+|+|||+|.+++.+. ++ -.+|+.-|+. +...+..++.. .... .+
T Consensus 31 ~~~vLDiGcG~G~~a~~La--------~~---------g~~V~gvD~S-----------~~~i~~a~~~~~~~~~---~~ 79 (197)
T PRK11207 31 PGKTLDLGCGNGRNSLYLA--------AN---------GFDVTAWDKN-----------PMSIANLERIKAAENL---DN 79 (197)
T ss_pred CCcEEEECCCCCHHHHHHH--------HC---------CCEEEEEeCC-----------HHHHHHHHHHHHHcCC---Cc
Confidence 4699999999999998766 21 1567777874 22222111111 1111 11
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
+..+..++- .+-+++++|+++|+.++||+.. .|...+++.-++-|+
T Consensus 80 --v~~~~~d~~-~~~~~~~fD~I~~~~~~~~~~~-------------------------------~~~~~~l~~i~~~Lk 125 (197)
T PRK11207 80 --LHTAVVDLN-NLTFDGEYDFILSTVVLMFLEA-------------------------------KTIPGLIANMQRCTK 125 (197)
T ss_pred --ceEEecChh-hCCcCCCcCEEEEecchhhCCH-------------------------------HHHHHHHHHHHHHcC
Confidence 122223552 3334578999999999999642 234457788888999
Q ss_pred cCceEEEE-eeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEE
Q 017514 210 AEGRMVLT-FLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLE 287 (370)
Q Consensus 210 ~GG~lvl~-~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le 287 (370)
|||++++. .+...+ .+.. .| |-+..+.+|+.+.++ | |++.+.+
T Consensus 126 pgG~~~~~~~~~~~~-~~~~-------------------~~------------~~~~~~~~el~~~~~--~-~~~~~~~ 169 (197)
T PRK11207 126 PGGYNLIVAAMDTAD-YPCT-------------------VG------------FPFAFKEGELRRYYE--G-WEMVKYN 169 (197)
T ss_pred CCcEEEEEEEecCCC-CCCC-------------------CC------------CCCccCHHHHHHHhC--C-CeEEEee
Confidence 99996554 333221 1100 01 236678999998887 6 8776553
|
|
| >PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities [] | Back alignment and domain information |
|---|
Probab=98.37 E-value=2.7e-07 Score=86.96 Aligned_cols=162 Identities=20% Similarity=0.293 Sum_probs=66.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhC-CCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLG-SASGAAG 128 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~-~~~~~~~ 128 (370)
...+|+|+|||+|-.|+.+. ++ -.|..+|+.-|.. +.+...-+++.. ... .+
T Consensus 47 ~g~~vLDv~~GtG~~~~~l~--------~~------~~~~~~v~~vD~s-----------~~ML~~a~~k~~~~~~--~~ 99 (233)
T PF01209_consen 47 PGDRVLDVACGTGDVTRELA--------RR------VGPNGKVVGVDIS-----------PGMLEVARKKLKREGL--QN 99 (233)
T ss_dssp S--EEEEET-TTSHHHHHHG--------GG------SS---EEEEEES------------HHHHHHHHHHHHHTT----S
T ss_pred CCCEEEEeCCChHHHHHHHH--------HH------CCCccEEEEecCC-----------HHHHHHHHHHHHhhCC--CC
Confidence 35799999999998887665 32 1245788888986 544333322211 111 01
Q ss_pred ceEEeecCCCccccc-CCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017514 129 QCFFTGVPGSFYGRL-FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l-~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~E 207 (370)
--|+.| +. +.| ||++|+|.+++++.||-+.+.+ ..|+.-.+-
T Consensus 100 i~~v~~---da-~~lp~~d~sfD~v~~~fglrn~~d~~---------------------------------~~l~E~~RV 142 (233)
T PF01209_consen 100 IEFVQG---DA-EDLPFPDNSFDAVTCSFGLRNFPDRE---------------------------------RALREMYRV 142 (233)
T ss_dssp EEEEE----BT-TB--S-TT-EEEEEEES-GGG-SSHH---------------------------------HHHHHHHHH
T ss_pred eeEEEc---CH-HHhcCCCCceeEEEHHhhHHhhCCHH---------------------------------HHHHHHHHH
Confidence 245555 55 344 6899999999999999864411 145666788
Q ss_pred hccCceEEEEeeccCCCCCCCchhhhHHHH----HHHHHHHHHhcCCcchhhhccCC----cCcccCCHHHHHHHHHhcC
Q 017514 208 LVAEGRMVLTFLGRKSQDPSSKECCYIWEL----LATALNNMVSEGLIEEEKVNCFN----IPQYTPSPAEIKSEVIKEG 279 (370)
Q Consensus 208 L~~GG~lvl~~~g~~~~~~~~~~~~~~~~~----l~~al~~mv~eG~i~~e~~d~f~----~P~y~~s~eE~~~~ie~~G 279 (370)
|+|||++++.=++++.... ...+|.. +--.+- ++++.+ .+.+. .-.-+|+.+|+.+.+++.|
T Consensus 143 LkPGG~l~ile~~~p~~~~----~~~~~~~y~~~ilP~~g-----~l~~~~-~~~Y~yL~~Si~~f~~~~~~~~~l~~~G 212 (233)
T PF01209_consen 143 LKPGGRLVILEFSKPRNPL----LRALYKFYFKYILPLIG-----RLLSGD-REAYRYLPESIRRFPSPEELKELLEEAG 212 (233)
T ss_dssp EEEEEEEEEEEEEB-SSHH----HHHHHHH--------------------------------------------------
T ss_pred cCCCeEEEEeeccCCCCch----hhceeeeeecccccccc-----cccccc-cccccccccccccccccccccccccccc
Confidence 9999999999888876421 1112211 111221 223332 22221 2224689999999999999
Q ss_pred ceEEEEE
Q 017514 280 SFTIDHL 286 (370)
Q Consensus 280 sF~i~~l 286 (370)
|+..+.
T Consensus 213 -f~~v~~ 218 (233)
T PF01209_consen 213 -FKNVEY 218 (233)
T ss_dssp -------
T ss_pred -cccccc
Confidence 864333
|
Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C. |
| >PRK12335 tellurite resistance protein TehB; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=8.9e-06 Score=78.71 Aligned_cols=135 Identities=18% Similarity=0.199 Sum_probs=82.8
Q ss_pred eEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhC-CCCCCCCce
Q 017514 52 VAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLG-SASGAAGQC 130 (370)
Q Consensus 52 ~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~-~~~~~~~~~ 130 (370)
-+|+|+|||+|.|++.+. +. -.+|+.-|.. +...+...+... .. -++
T Consensus 122 ~~vLDlGcG~G~~~~~la--------~~---------g~~V~avD~s-----------~~ai~~~~~~~~~~~----l~v 169 (287)
T PRK12335 122 GKALDLGCGQGRNSLYLA--------LL---------GFDVTAVDIN-----------QQSLENLQEIAEKEN----LNI 169 (287)
T ss_pred CCEEEeCCCCCHHHHHHH--------HC---------CCEEEEEECC-----------HHHHHHHHHHHHHcC----Cce
Confidence 499999999999998776 21 1577777874 222222211111 11 111
Q ss_pred EEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 017514 131 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 210 (370)
Q Consensus 131 f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~ 210 (370)
..+.+++- ...+++++|+++|+.+||+++. .++..+|+.-.+-|+|
T Consensus 170 --~~~~~D~~-~~~~~~~fD~I~~~~vl~~l~~-------------------------------~~~~~~l~~~~~~Lkp 215 (287)
T PRK12335 170 --RTGLYDIN-SASIQEEYDFILSTVVLMFLNR-------------------------------ERIPAIIKNMQEHTNP 215 (287)
T ss_pred --EEEEechh-cccccCCccEEEEcchhhhCCH-------------------------------HHHHHHHHHHHHhcCC
Confidence 11222332 2224789999999999999642 2445578888899999
Q ss_pred CceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcC-cccCCHHHHHHHHHhcCceEEEEEE
Q 017514 211 EGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIP-QYTPSPAEIKSEVIKEGSFTIDHLE 287 (370)
Q Consensus 211 GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P-~y~~s~eE~~~~ie~~GsF~i~~le 287 (370)
||++++......+..+ ...| -+..+.+|+++.+.. |+|.+.+
T Consensus 216 gG~~l~v~~~~~~~~~--------------------------------~~~p~~~~~~~~el~~~~~~---~~i~~~~ 258 (287)
T PRK12335 216 GGYNLIVCAMDTEDYP--------------------------------CPMPFSFTFKEGELKDYYQD---WEIVKYN 258 (287)
T ss_pred CcEEEEEEecccccCC--------------------------------CCCCCCcccCHHHHHHHhCC---CEEEEEe
Confidence 9997775443222111 1123 356789999998863 8877664
|
|
| >TIGR00477 tehB tellurite resistance protein TehB | Back alignment and domain information |
|---|
Probab=98.18 E-value=8.4e-06 Score=74.45 Aligned_cols=137 Identities=11% Similarity=0.076 Sum_probs=81.0
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhh-CCCCCCCCc
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAAGQ 129 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~-~~~~~~~~~ 129 (370)
+.+|+|+|||+|.+++.+. ++ -.+|+.-|+. +.......... ..+. .-
T Consensus 31 ~~~vLDiGcG~G~~a~~la--------~~---------g~~V~~iD~s-----------~~~l~~a~~~~~~~~~---~v 79 (195)
T TIGR00477 31 PCKTLDLGCGQGRNSLYLS--------LA---------GYDVRAWDHN-----------PASIASVLDMKARENL---PL 79 (195)
T ss_pred CCcEEEeCCCCCHHHHHHH--------HC---------CCeEEEEECC-----------HHHHHHHHHHHHHhCC---Cc
Confidence 4699999999999998776 21 1577888875 22222111111 0111 11
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
.+.. .+. ....+++++|+++|+.++||++. .++..+++.-++-|+
T Consensus 80 ~~~~---~d~-~~~~~~~~fD~I~~~~~~~~~~~-------------------------------~~~~~~l~~~~~~Lk 124 (195)
T TIGR00477 80 RTDA---YDI-NAAALNEDYDFIFSTVVFMFLQA-------------------------------GRVPEIIANMQAHTR 124 (195)
T ss_pred eeEe---ccc-hhccccCCCCEEEEecccccCCH-------------------------------HHHHHHHHHHHHHhC
Confidence 1111 122 12223568999999999999643 234457788889999
Q ss_pred cCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEE
Q 017514 210 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLE 287 (370)
Q Consensus 210 ~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le 287 (370)
|||++++...-..+..+. | . .|-|-.+++|+++.++ + |++.+.+
T Consensus 125 pgG~lli~~~~~~~~~~~---------------------~---------~-~~~~~~~~~el~~~f~--~-~~~~~~~ 168 (195)
T TIGR00477 125 PGGYNLIVAAMDTADYPC---------------------H---------M-PFSFTFKEDELRQYYA--D-WELLKYN 168 (195)
T ss_pred CCcEEEEEEecccCCCCC---------------------C---------C-CcCccCCHHHHHHHhC--C-CeEEEee
Confidence 999966544322211110 1 0 1236788999999886 3 7776665
|
Part of a tellurite-reducing operon tehA and tehB |
| >TIGR02716 C20_methyl_CrtF C-20 methyltransferase BchU | Back alignment and domain information |
|---|
Probab=98.18 E-value=0.00013 Score=71.12 Aligned_cols=155 Identities=15% Similarity=0.164 Sum_probs=88.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (370)
.+..+|+|+|||+|..++.+. +++ |..+++.-|+|. ....... .. .+.+.. .
T Consensus 148 ~~~~~vlDiG~G~G~~~~~~~--------~~~-------p~~~~~~~D~~~-----~~~~a~~---~~-~~~gl~----~ 199 (306)
T TIGR02716 148 DGVKKMIDVGGGIGDISAAML--------KHF-------PELDSTILNLPG-----AIDLVNE---NA-AEKGVA----D 199 (306)
T ss_pred CCCCEEEEeCCchhHHHHHHH--------HHC-------CCCEEEEEecHH-----HHHHHHH---HH-HhCCcc----c
Confidence 345799999999998877666 432 567888889861 1111111 11 111211 1
Q ss_pred ceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
+ +..++|+|++.-+|+ .|+++.+..+|-. ++ ++-..+|+.-++-|
T Consensus 200 r--v~~~~~d~~~~~~~~--~D~v~~~~~lh~~---~~----------------------------~~~~~il~~~~~~L 244 (306)
T TIGR02716 200 R--MRGIAVDIYKESYPE--ADAVLFCRILYSA---NE----------------------------QLSTIMCKKAFDAM 244 (306)
T ss_pred e--EEEEecCccCCCCCC--CCEEEeEhhhhcC---Ch----------------------------HHHHHHHHHHHHhc
Confidence 2 233566998755565 4988888888832 21 11223677778899
Q ss_pred ccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEE
Q 017514 209 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTID 284 (370)
Q Consensus 209 ~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~ 284 (370)
+|||++++.=...++... . .+..+...+..+ |+.. .+.-.++.+|+.+++++.| |+..
T Consensus 245 ~pgG~l~i~d~~~~~~~~--~----~~~~~~~~~~~~---~~~~--------~~~~~~~~~e~~~ll~~aG-f~~v 302 (306)
T TIGR02716 245 RSGGRLLILDMVIDDPEN--P----NFDYLSHYILGA---GMPF--------SVLGFKEQARYKEILESLG-YKDV 302 (306)
T ss_pred CCCCEEEEEEeccCCCCC--c----hhhHHHHHHHHc---cccc--------ccccCCCHHHHHHHHHHcC-CCee
Confidence 999999888443332211 1 112222222211 2110 1123556899999999999 8643
|
Members of this protein family are the S-adenosylmethionine-depenedent C-20 methyltransferase BchU, part of the pathway of bacteriochlorophyll c production in photosynthetic green sulfur bacteria. The position modified by this enzyme represents the difference between bacteriochlorophylls c and d; strains lacking this protein can only produced bacteriochlorophyll d. |
| >PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4) | Back alignment and domain information |
|---|
Probab=98.14 E-value=0.00017 Score=69.64 Aligned_cols=151 Identities=19% Similarity=0.271 Sum_probs=79.4
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH----hhCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK----QLGSASGA 126 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~----~~~~~~~~ 126 (370)
-.+|+|+|||-|..++.+. +++ | .+|.--.|. ..+..+.+ +.|..
T Consensus 63 G~~vLDiGcGwG~~~~~~a--------~~~---g-----~~v~gitlS------------~~Q~~~a~~~~~~~gl~--- 111 (273)
T PF02353_consen 63 GDRVLDIGCGWGGLAIYAA--------ERY---G-----CHVTGITLS------------EEQAEYARERIREAGLE--- 111 (273)
T ss_dssp T-EEEEES-TTSHHHHHHH--------HHH----------EEEEEES-------------HHHHHHHHHHHHCSTSS---
T ss_pred CCEEEEeCCCccHHHHHHH--------HHc---C-----cEEEEEECC------------HHHHHHHHHHHHhcCCC---
Confidence 3699999999999988777 443 1 333333331 22222211 11211
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
..+-+.- .+| ..+ |. +.|-++|.-++.-+ +. +++..|++.-++
T Consensus 112 -~~v~v~~--~D~-~~~-~~-~fD~IvSi~~~Ehv---g~----------------------------~~~~~~f~~~~~ 154 (273)
T PF02353_consen 112 -DRVEVRL--QDY-RDL-PG-KFDRIVSIEMFEHV---GR----------------------------KNYPAFFRKISR 154 (273)
T ss_dssp -STEEEEE--S-G-GG-----S-SEEEEESEGGGT---CG----------------------------GGHHHHHHHHHH
T ss_pred -CceEEEE--eec-ccc-CC-CCCEEEEEechhhc---Ch----------------------------hHHHHHHHHHHH
Confidence 2222211 255 333 22 88998888776553 21 456668999999
Q ss_pred hhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCc-ccCCHHHHHHHHHhcCceEEEE
Q 017514 207 ELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQ-YTPSPAEIKSEVIKEGSFTIDH 285 (370)
Q Consensus 207 EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~-y~~s~eE~~~~ie~~GsF~i~~ 285 (370)
=|+|||++++...+..+.. ... . ...+-+-+....+|- +.|+.+|+...+++.| |+|.+
T Consensus 155 ~LkpgG~~~lq~i~~~~~~---------~~~-~---------~~~~~~~i~kyiFPgg~lps~~~~~~~~~~~~-l~v~~ 214 (273)
T PF02353_consen 155 LLKPGGRLVLQTITHRDPP---------YHA-E---------RRSSSDFIRKYIFPGGYLPSLSEILRAAEDAG-LEVED 214 (273)
T ss_dssp HSETTEEEEEEEEEE--HH---------HHH-C---------TTCCCHHHHHHTSTTS---BHHHHHHHHHHTT--EEEE
T ss_pred hcCCCcEEEEEeccccccc---------chh-h---------cCCCceEEEEeeCCCCCCCCHHHHHHHHhcCC-EEEEE
Confidence 9999999999988765431 000 0 000001122233454 6689999999889888 98877
Q ss_pred EEEE
Q 017514 286 LEVS 289 (370)
Q Consensus 286 le~~ 289 (370)
.+.+
T Consensus 215 ~~~~ 218 (273)
T PF02353_consen 215 VENL 218 (273)
T ss_dssp EEE-
T ss_pred EEEc
Confidence 6655
|
All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: |
| >TIGR02021 BchM-ChlM magnesium protoporphyrin O-methyltransferase | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.00017 Score=66.73 Aligned_cols=30 Identities=10% Similarity=0.168 Sum_probs=25.4
Q ss_pred CcCcccCCHHHHHHHHHhcCceEEEEEEEEe
Q 017514 260 NIPQYTPSPAEIKSEVIKEGSFTIDHLEVSE 290 (370)
Q Consensus 260 ~~P~y~~s~eE~~~~ie~~GsF~i~~le~~~ 290 (370)
..++++++++|+..++++.| |++...+.+.
T Consensus 179 ~~~~~~~~~~~~~~~l~~~G-f~v~~~~~~~ 208 (219)
T TIGR02021 179 ATSAYLHPMTDLERALGELG-WKIVREGLVS 208 (219)
T ss_pred ccceEEecHHHHHHHHHHcC-ceeeeeeccc
Confidence 35678899999999999999 9998887553
|
This model represents the S-adenosylmethionine-dependent O-methyltransferase responsible for methylation of magnesium protoporphyrin IX. This step is essentiasl for the biosynthesis of both chlorophyll and bacteriochlorophyll. This model encompasses two closely related clades, from cyanobacteria (and plants) where it is called ChlM and other photosynthetic bacteria where it is known as BchM. |
| >PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.04 E-value=9.7e-05 Score=70.55 Aligned_cols=151 Identities=19% Similarity=0.189 Sum_probs=85.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~ 126 (370)
..-+|+|+|||+|..++.+. +.. + +.-+|+.-|.- +...+..++ ..+..
T Consensus 77 ~g~~VLDiG~G~G~~~~~~a--------~~~---g---~~~~v~gvD~s-----------~~~l~~A~~~~~~~g~~--- 128 (272)
T PRK11873 77 PGETVLDLGSGGGFDCFLAA--------RRV---G---PTGKVIGVDMT-----------PEMLAKARANARKAGYT--- 128 (272)
T ss_pred CCCEEEEeCCCCCHHHHHHH--------HHh---C---CCCEEEEECCC-----------HHHHHHHHHHHHHcCCC---
Confidence 34699999999997766443 221 1 33578888874 222222111 11211
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
+-.|.. +++..--+|++++|+++|..++||....+ ..|+.-.+
T Consensus 129 -~v~~~~---~d~~~l~~~~~~fD~Vi~~~v~~~~~d~~---------------------------------~~l~~~~r 171 (272)
T PRK11873 129 -NVEFRL---GEIEALPVADNSVDVIISNCVINLSPDKE---------------------------------RVFKEAFR 171 (272)
T ss_pred -CEEEEE---cchhhCCCCCCceeEEEEcCcccCCCCHH---------------------------------HHHHHHHH
Confidence 223433 36533235788999999999999842211 13455577
Q ss_pred hhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEE
Q 017514 207 ELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHL 286 (370)
Q Consensus 207 EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~l 286 (370)
-|+|||++++.-.......+ ..+...+.-. .|. .....+.+|+...+++.| |...++
T Consensus 172 ~LkpGG~l~i~~~~~~~~~~---------~~~~~~~~~~--~~~-----------~~~~~~~~e~~~~l~~aG-f~~v~i 228 (272)
T PRK11873 172 VLKPGGRFAISDVVLRGELP---------EEIRNDAELY--AGC-----------VAGALQEEEYLAMLAEAG-FVDITI 228 (272)
T ss_pred HcCCCcEEEEEEeeccCCCC---------HHHHHhHHHH--hcc-----------ccCCCCHHHHHHHHHHCC-CCceEE
Confidence 89999999997554322111 1111111111 011 112457899999999999 776655
Q ss_pred EE
Q 017514 287 EV 288 (370)
Q Consensus 287 e~ 288 (370)
..
T Consensus 229 ~~ 230 (272)
T PRK11873 229 QP 230 (272)
T ss_pred Ee
Confidence 43
|
|
| >PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A | Back alignment and domain information |
|---|
Probab=98.03 E-value=8.4e-05 Score=60.63 Aligned_cols=105 Identities=22% Similarity=0.286 Sum_probs=66.8
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhh---CCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL---GSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~---~~~~~~~ 127 (370)
.-+|+|+|||+|..++.+. ++. |..+|+--|.- |...+...+.. +...
T Consensus 2 ~~~vLDlGcG~G~~~~~l~--------~~~-------~~~~v~gvD~s-----------~~~~~~a~~~~~~~~~~~--- 52 (112)
T PF12847_consen 2 GGRVLDLGCGTGRLSIALA--------RLF-------PGARVVGVDIS-----------PEMLEIARERAAEEGLSD--- 52 (112)
T ss_dssp TCEEEEETTTTSHHHHHHH--------HHH-------TTSEEEEEESS-----------HHHHHHHHHHHHHTTTTT---
T ss_pred CCEEEEEcCcCCHHHHHHH--------hcC-------CCCEEEEEeCC-----------HHHHHHHHHHHHhcCCCC---
Confidence 3589999999999999877 321 45778888874 43333322222 2110
Q ss_pred CceEEeecCCCcccccC-CCCceeEEEecc-ccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 128 GQCFFTGVPGSFYGRLF-PRNSVHLFHSSY-SLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRS 205 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~-p~~sv~~~~S~~-alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra 205 (370)
+-.|..+ ++ .... ..+.+|++++.. ++|++-.. .+...+|+.-.
T Consensus 53 ~i~~~~~---d~-~~~~~~~~~~D~v~~~~~~~~~~~~~------------------------------~~~~~~l~~~~ 98 (112)
T PF12847_consen 53 RITFVQG---DA-EFDPDFLEPFDLVICSGFTLHFLLPL------------------------------DERRRVLERIR 98 (112)
T ss_dssp TEEEEES---CC-HGGTTTSSCEEEEEECSGSGGGCCHH------------------------------HHHHHHHHHHH
T ss_pred CeEEEEC---cc-ccCcccCCCCCEEEECCCccccccch------------------------------hHHHHHHHHHH
Confidence 2345444 55 2222 334599999999 77753221 24455788889
Q ss_pred HhhccCceEEEEe
Q 017514 206 EELVAEGRMVLTF 218 (370)
Q Consensus 206 ~EL~~GG~lvl~~ 218 (370)
+-|+|||+|++..
T Consensus 99 ~~L~pgG~lvi~~ 111 (112)
T PF12847_consen 99 RLLKPGGRLVINT 111 (112)
T ss_dssp HHEEEEEEEEEEE
T ss_pred HhcCCCcEEEEEE
Confidence 9999999999874
|
... |
| >PRK06922 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=1.9e-05 Score=83.79 Aligned_cols=114 Identities=18% Similarity=0.195 Sum_probs=73.1
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhC-CCCCCCCc
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLG-SASGAAGQ 129 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~-~~~~~~~~ 129 (370)
..+|+|+|||+|..+..+. +++ |..+|+.-|+. +......+.... ... +.
T Consensus 419 g~rVLDIGCGTG~ls~~LA--------~~~-------P~~kVtGIDIS-----------~~MLe~Ararl~~~g~---~i 469 (677)
T PRK06922 419 GDTIVDVGAGGGVMLDMIE--------EET-------EDKRIYGIDIS-----------ENVIDTLKKKKQNEGR---SW 469 (677)
T ss_pred CCEEEEeCCCCCHHHHHHH--------HhC-------CCCEEEEEECC-----------HHHHHHHHHHhhhcCC---Ce
Confidence 4799999999997765444 321 45889999987 443333222111 110 22
Q ss_pred eEEeecCCCcc--cccCCCCceeEEEeccccccc-cCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 130 CFFTGVPGSFY--GRLFPRNSVHLFHSSYSLQWL-SQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 130 ~f~~~vpgSFy--~~l~p~~sv~~~~S~~alhWl-s~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
.++.| +.- ...||++++|++++++++||+ +.+|..-. +|. .+|...+|+.-.+
T Consensus 470 e~I~g---Da~dLp~~fedeSFDvVVsn~vLH~L~syIp~~g~------------------~f~---~edl~kiLreI~R 525 (677)
T PRK06922 470 NVIKG---DAINLSSSFEKESVDTIVYSSILHELFSYIEYEGK------------------KFN---HEVIKKGLQSAYE 525 (677)
T ss_pred EEEEc---chHhCccccCCCCEEEEEEchHHHhhhhhcccccc------------------ccc---HHHHHHHHHHHHH
Confidence 33333 332 223788999999999999974 55553110 000 1577789999999
Q ss_pred hhccCceEEEE
Q 017514 207 ELVAEGRMVLT 217 (370)
Q Consensus 207 EL~~GG~lvl~ 217 (370)
-|+|||++++.
T Consensus 526 VLKPGGrLII~ 536 (677)
T PRK06922 526 VLKPGGRIIIR 536 (677)
T ss_pred HcCCCcEEEEE
Confidence 99999999996
|
|
| >PF13847 Methyltransf_31: Methyltransferase domain; PDB: 3T0I_B 3SVZ_B 3SXJ_A 3F4K_A 3GU3_B 2GH1_A 1R8Y_E 1R8X_B 2B3T_A 1T43_A | Back alignment and domain information |
|---|
Probab=97.99 E-value=5.9e-05 Score=65.67 Aligned_cols=104 Identities=21% Similarity=0.300 Sum_probs=69.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~ 126 (370)
+..+|+|+|||+|..+..+.. . .+ |..+++.-|+- +..-+..++ +.+..
T Consensus 3 ~~~~iLDlGcG~G~~~~~l~~--------~---~~---~~~~i~gvD~s-----------~~~i~~a~~~~~~~~~~--- 54 (152)
T PF13847_consen 3 SNKKILDLGCGTGRLLIQLAK--------E---LN---PGAKIIGVDIS-----------EEMIEYAKKRAKELGLD--- 54 (152)
T ss_dssp TTSEEEEET-TTSHHHHHHHH--------H---ST---TTSEEEEEESS-----------HHHHHHHHHHHHHTTST---
T ss_pred CCCEEEEecCcCcHHHHHHHH--------h---cC---CCCEEEEEECc-----------HHHHHHhhccccccccc---
Confidence 458999999999999887662 2 11 34789999986 444333322 12221
Q ss_pred CCceEEeecCCCccccc---CCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRL---FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKC 203 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l---~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~ 203 (370)
+-.|..+ ++.+ + ++ +.+|++++..++||+.. ...+|+.
T Consensus 55 -ni~~~~~---d~~~-l~~~~~-~~~D~I~~~~~l~~~~~---------------------------------~~~~l~~ 95 (152)
T PF13847_consen 55 -NIEFIQG---DIED-LPQELE-EKFDIIISNGVLHHFPD---------------------------------PEKVLKN 95 (152)
T ss_dssp -TEEEEES---BTTC-GCGCSS-TTEEEEEEESTGGGTSH---------------------------------HHHHHHH
T ss_pred -ccceEEe---ehhc-cccccC-CCeeEEEEcCchhhccC---------------------------------HHHHHHH
Confidence 2355554 5544 3 33 89999999999999554 1225667
Q ss_pred HHHhhccCceEEEEeec
Q 017514 204 RSEELVAEGRMVLTFLG 220 (370)
Q Consensus 204 Ra~EL~~GG~lvl~~~g 220 (370)
-.+-|++||.+++....
T Consensus 96 ~~~~lk~~G~~i~~~~~ 112 (152)
T PF13847_consen 96 IIRLLKPGGILIISDPN 112 (152)
T ss_dssp HHHHEEEEEEEEEEEEE
T ss_pred HHHHcCCCcEEEEEECC
Confidence 78899999999999886
|
... |
| >TIGR02081 metW methionine biosynthesis protein MetW | Back alignment and domain information |
|---|
Probab=97.99 E-value=9.7e-05 Score=67.14 Aligned_cols=26 Identities=8% Similarity=-0.175 Sum_probs=23.3
Q ss_pred cccCCHHHHHHHHHhcCceEEEEEEEE
Q 017514 263 QYTPSPAEIKSEVIKEGSFTIDHLEVS 289 (370)
Q Consensus 263 ~y~~s~eE~~~~ie~~GsF~i~~le~~ 289 (370)
..+++.+|+.+.+++.| |++.....+
T Consensus 143 ~~~~s~~~~~~ll~~~G-f~v~~~~~~ 168 (194)
T TIGR02081 143 IHFCTIADFEDLCGELN-LRILDRAAF 168 (194)
T ss_pred cccCcHHHHHHHHHHCC-CEEEEEEEe
Confidence 46789999999999999 999888877
|
This protein is found alongside MetX, of the enzyme that acylates homoserine as a first step toward methionine biosynthesis, in many species. It appears to act in methionine biosynthesis but is not fully characterized. |
| >PF03848 TehB: Tellurite resistance protein TehB; InterPro: IPR015985 Tellurite resistance protein TehB is part of a tellurite-reducing operon tehA and tehB | Back alignment and domain information |
|---|
Probab=97.95 E-value=4.2e-05 Score=70.07 Aligned_cols=119 Identities=15% Similarity=0.125 Sum_probs=67.5
Q ss_pred HHhHHHHHHHHHhhcccCCCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhh
Q 017514 30 SIAKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSL 109 (370)
Q Consensus 30 ~~~~~~l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l 109 (370)
....+.+.+++.. -++-+++|+|||.|+||+.+. ++ | +.|..-|.-
T Consensus 16 ~~~hs~v~~a~~~------~~~g~~LDlgcG~GRNalyLA--------~~----G-----~~VtAvD~s----------- 61 (192)
T PF03848_consen 16 TPTHSEVLEAVPL------LKPGKALDLGCGEGRNALYLA--------SQ----G-----FDVTAVDIS----------- 61 (192)
T ss_dssp ----HHHHHHCTT------S-SSEEEEES-TTSHHHHHHH--------HT----T------EEEEEESS-----------
T ss_pred CCCcHHHHHHHhh------cCCCcEEEcCCCCcHHHHHHH--------HC----C-----CeEEEEECC-----------
Confidence 3445556666421 235799999999999999888 32 2 788888875
Q ss_pred HHHHHHHHHhh-CCCCCCCCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHH
Q 017514 110 ASFQKILRKQL-GSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTA 188 (370)
Q Consensus 110 ~~~~~~~~~~~-~~~~~~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~a 188 (370)
+.-.+++.+.. ..+. ++ ...-.++-+. -++...|+++|...+|.|.. +
T Consensus 62 ~~al~~l~~~a~~~~l----~i--~~~~~Dl~~~-~~~~~yD~I~st~v~~fL~~-~----------------------- 110 (192)
T PF03848_consen 62 PVALEKLQRLAEEEGL----DI--RTRVADLNDF-DFPEEYDFIVSTVVFMFLQR-E----------------------- 110 (192)
T ss_dssp HHHHHHHHHHHHHTT-----TE--EEEE-BGCCB-S-TTTEEEEEEESSGGGS-G-G-----------------------
T ss_pred HHHHHHHHHHHhhcCc----ee--EEEEecchhc-cccCCcCEEEEEEEeccCCH-H-----------------------
Confidence 22222221111 0111 11 1111244222 34578999999999999764 1
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCceEEEEeec
Q 017514 189 YYEQFQRDFSLFLKCRSEELVAEGRMVLTFLG 220 (370)
Q Consensus 189 y~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g 220 (370)
.+..+++...+.++|||.+++..+-
T Consensus 111 -------~~~~i~~~m~~~~~pGG~~li~~~~ 135 (192)
T PF03848_consen 111 -------LRPQIIENMKAATKPGGYNLIVTFM 135 (192)
T ss_dssp -------GHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred -------HHHHHHHHHHhhcCCcEEEEEEEec
Confidence 1223677778999999998886553
|
When present in high copy number, TehB is responsible for potassium tellurite resistance, probably by increasing the reduction rate of tellurite to metallic tellurium within the bacterium. TehB is a cytoplasmic protein which possesses three conserved motifs (I, II, and III) found in S-adenosyl-L-methionine (SAM)-dependent non-nucleic acid methyltransferases []. Conformational changes in TehB are observed upon binding of both tellurite and SAM, suggesting that TehB utilises a methyltransferase activity in the detoxification of tellurite. This entry represents the methyltransferase domain found in all TehB proteins.; PDB: 2KW5_A 3MER_B 3M70_A 2I6G_A 4DQ0_D 2XVA_B 2XVM_A. |
| >TIGR03438 probable methyltransferase | Back alignment and domain information |
|---|
Probab=97.94 E-value=8e-05 Score=72.66 Aligned_cols=131 Identities=19% Similarity=0.189 Sum_probs=77.9
Q ss_pred HHHHHHHHhhcccCCCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHH
Q 017514 34 PITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQ 113 (370)
Q Consensus 34 ~~l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~ 113 (370)
.++++..+++.... +...+|+|+|||+|..|..+++... . ..+++--|+. +.+.
T Consensus 48 ~il~~~~~~ia~~~-~~~~~iLELGcGtG~~t~~Ll~~l~-------------~-~~~~~~iDiS-----------~~mL 101 (301)
T TIGR03438 48 AILERHADEIAAAT-GAGCELVELGSGSSRKTRLLLDALR-------------Q-PARYVPIDIS-----------ADAL 101 (301)
T ss_pred HHHHHHHHHHHHhh-CCCCeEEecCCCcchhHHHHHHhhc-------------c-CCeEEEEECC-----------HHHH
Confidence 34444444443221 2346899999999999998872211 0 2778888986 4332
Q ss_pred HHHHHhhCCCCCCCCceEEeecCCCccccc-CCCC----ceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHH
Q 017514 114 KILRKQLGSASGAAGQCFFTGVPGSFYGRL-FPRN----SVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTA 188 (370)
Q Consensus 114 ~~~~~~~~~~~~~~~~~f~~~vpgSFy~~l-~p~~----sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~a 188 (370)
....++....+ +.+=+.++-|+|.+.+ +|+. ...++++.+++++++ |
T Consensus 102 ~~a~~~l~~~~---p~~~v~~i~gD~~~~~~~~~~~~~~~~~~~~~gs~~~~~~--~----------------------- 153 (301)
T TIGR03438 102 KESAAALAADY---PQLEVHGICADFTQPLALPPEPAAGRRLGFFPGSTIGNFT--P----------------------- 153 (301)
T ss_pred HHHHHHHHhhC---CCceEEEEEEcccchhhhhcccccCCeEEEEecccccCCC--H-----------------------
Confidence 22211111111 1233444556886543 2332 456777778888864 2
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCceEEEEeeccCCC
Q 017514 189 YYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQ 224 (370)
Q Consensus 189 y~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~~~ 224 (370)
.|...||+.-++-|+|||+|++.+-...+.
T Consensus 154 ------~e~~~~L~~i~~~L~pgG~~lig~d~~~~~ 183 (301)
T TIGR03438 154 ------EEAVAFLRRIRQLLGPGGGLLIGVDLVKDP 183 (301)
T ss_pred ------HHHHHHHHHHHHhcCCCCEEEEeccCCCCH
Confidence 234558888889999999999877655443
|
This model represents a distinct set of uncharacterized proteins found in the bacteria. Analysis by PSI-BLAST shows remote sequence homology to methyltransferases |
| >PRK07580 Mg-protoporphyrin IX methyl transferase; Validated | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.0004 Score=64.13 Aligned_cols=32 Identities=16% Similarity=0.228 Sum_probs=25.5
Q ss_pred CcCcccCCHHHHHHHHHhcCceEEEEEEEEeec
Q 017514 260 NIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVN 292 (370)
Q Consensus 260 ~~P~y~~s~eE~~~~ie~~GsF~i~~le~~~~~ 292 (370)
..+.+..+.+++...++..| |++.+.+.+...
T Consensus 187 ~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~~~ 218 (230)
T PRK07580 187 TTRIYPHREKGIRRALAAAG-FKVVRTERISSG 218 (230)
T ss_pred CCCccccCHHHHHHHHHHCC-CceEeeeeccch
Confidence 34567789999999999999 998887766433
|
|
| >smart00138 MeTrc Methyltransferase, chemotaxis proteins | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00018 Score=69.08 Aligned_cols=43 Identities=21% Similarity=0.288 Sum_probs=33.2
Q ss_pred CCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEE
Q 017514 144 FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLT 217 (370)
Q Consensus 144 ~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~ 217 (370)
+|.+++|+++|.+.|||++. | +...+|+.=++-|+|||.|++.
T Consensus 199 ~~~~~fD~I~crnvl~yf~~-~------------------------------~~~~~l~~l~~~L~pGG~L~lg 241 (264)
T smart00138 199 PPLGDFDLIFCRNVLIYFDE-P------------------------------TQRKLLNRFAEALKPGGYLFLG 241 (264)
T ss_pred CccCCCCEEEechhHHhCCH-H------------------------------HHHHHHHHHHHHhCCCeEEEEE
Confidence 46889999999999999754 2 1223566678899999999874
|
Methylates methyl-accepting chemotaxis proteins to form gamma-glutamyl methyl ester residues. |
| >PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=97.90 E-value=9e-05 Score=68.08 Aligned_cols=158 Identities=15% Similarity=0.094 Sum_probs=89.6
Q ss_pred HHHHHHHHhHHHHHHHHHhhcccCCCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchH
Q 017514 24 VQEKVISIAKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFN 103 (370)
Q Consensus 24 ~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFn 103 (370)
+|+.+.....|++-.....+.........+|+|+|||+|..+..+. +.+ |..+|+..|.-
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VLDiGcGtG~~~~~la--------~~~-------p~~~v~gVD~s----- 73 (202)
T PRK00121 14 GQQRAIEELWPRLSPAPLDWAELFGNDAPIHLEIGFGKGEFLVEMA--------KAN-------PDINFIGIEVH----- 73 (202)
T ss_pred chhhhhcccchhhcCCCCCHHHHcCCCCCeEEEEccCCCHHHHHHH--------HHC-------CCccEEEEEec-----
Confidence 4556666666666333222211112246799999999999988665 321 44678888875
Q ss_pred HHHHhhHHHHHHHHHhhC-CCCCCCCceEEeecCCCc---ccccCCCCceeEEEeccccccccCCCCCccCCCceeeecC
Q 017514 104 TIFRSLASFQKILRKQLG-SASGAAGQCFFTGVPGSF---YGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMAS 179 (370)
Q Consensus 104 tLF~~l~~~~~~~~~~~~-~~~~~~~~~f~~~vpgSF---y~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~ 179 (370)
+.......+... ... .+-.|+.+ +. +.+.++++++|.++++++.+|... +.. +..
T Consensus 74 ------~~~i~~a~~~~~~~~~--~~v~~~~~---d~~~~l~~~~~~~~~D~V~~~~~~p~~~~-~~~----~~~----- 132 (202)
T PRK00121 74 ------EPGVGKALKKIEEEGL--TNLRLLCG---DAVEVLLDMFPDGSLDRIYLNFPDPWPKK-RHH----KRR----- 132 (202)
T ss_pred ------hHHHHHHHHHHHHcCC--CCEEEEec---CHHHHHHHHcCccccceEEEECCCCCCCc-ccc----ccc-----
Confidence 322222221111 011 02233333 44 234578899999999988888553 111 000
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCc
Q 017514 180 TSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLI 251 (370)
Q Consensus 180 ~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i 251 (370)
.+...||+.=++-|+|||.+++.... .+.+...+..|.+.|+-
T Consensus 133 ---------------~~~~~~l~~i~~~LkpgG~l~i~~~~--------------~~~~~~~~~~~~~~g~~ 175 (202)
T PRK00121 133 ---------------LVQPEFLALYARKLKPGGEIHFATDW--------------EGYAEYMLEVLSAEGGF 175 (202)
T ss_pred ---------------cCCHHHHHHHHHHcCCCCEEEEEcCC--------------HHHHHHHHHHHHhCccc
Confidence 11234777778999999999987632 23445566666666653
|
|
| >PF08242 Methyltransf_12: Methyltransferase domain; InterPro: IPR013217 Methyl transfer from the ubiquitous donor S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=97.89 E-value=1e-05 Score=65.06 Aligned_cols=95 Identities=21% Similarity=0.217 Sum_probs=47.4
Q ss_pred EeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHH----HHHHHhhCCCCCCCCce
Q 017514 55 ADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQ----KILRKQLGSASGAAGQC 130 (370)
Q Consensus 55 aD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~----~~~~~~~~~~~~~~~~~ 130 (370)
+|+|||+|..+..++ +.+ |..+++..|.- +... ..+.+ .+.. ...
T Consensus 1 LdiGcG~G~~~~~l~--------~~~-------~~~~~~~~D~s-----------~~~l~~a~~~~~~-~~~~----~~~ 49 (99)
T PF08242_consen 1 LDIGCGTGRLLRALL--------EEL-------PDARYTGVDIS-----------PSMLERARERLAE-LGND----NFE 49 (99)
T ss_dssp -EESTTTS-TTTTHH--------HHC--------EEEEEEEESS-----------SSTTSTTCCCHHH-CT-------EE
T ss_pred CEeCccChHHHHHHH--------HhC-------CCCEEEEEECC-----------HHHHHHHHHHhhh-cCCc----cee
Confidence 699999999999877 432 45888888875 2221 11111 1110 122
Q ss_pred EEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 017514 131 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 210 (370)
Q Consensus 131 f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~ 210 (370)
.+.....+.. ...+++++|+++++.+|||+ + |+..+|+.-++-|+|
T Consensus 50 ~~~~~~~~~~-~~~~~~~fD~V~~~~vl~~l---~------------------------------~~~~~l~~~~~~L~p 95 (99)
T PF08242_consen 50 RLRFDVLDLF-DYDPPESFDLVVASNVLHHL---E------------------------------DIEAVLRNIYRLLKP 95 (99)
T ss_dssp EEE--SSS----CCC----SEEEEE-TTS-----S-------------------------------HHHHHHHHTTT-TS
T ss_pred EEEeecCChh-hcccccccceehhhhhHhhh---h------------------------------hHHHHHHHHHHHcCC
Confidence 3333333332 22233799999999999998 2 223367788899999
Q ss_pred CceE
Q 017514 211 EGRM 214 (370)
Q Consensus 211 GG~l 214 (370)
||+|
T Consensus 96 gG~l 99 (99)
T PF08242_consen 96 GGIL 99 (99)
T ss_dssp S-EE
T ss_pred CCCC
Confidence 9986
|
The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] Fatty acid synthase (2.3.1.85 from EC), a biosynthetic enzyme catalysing the formation of long-chain fatty acids Glycine N-methyltransferase (2.1.1.20 from EC) which catalyses the SAM-dependent methylation of glycine to form sarcosine and may play a role in regulating the methylation potential of the cell [] Enniatin synthetase, involved in non-ribosomal biosynthesis of cyclohexadepsipeptidase, enniatin [] Histamine N-methyltransferase (2.1.1.8 from EC), a SAM-dependent histamine-inactivating enzyme [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ].; PDB: 2VZ8_A 2VZ9_A. |
| >PLN02336 phosphoethanolamine N-methyltransferase | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00018 Score=74.28 Aligned_cols=102 Identities=22% Similarity=0.177 Sum_probs=63.6
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCce
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (370)
..+|+|+|||+|.+|..+. +.+ -+|+..|.- . .+...-....+.. ..-.
T Consensus 38 ~~~vLDlGcG~G~~~~~la--------~~~---------~~v~giD~s-----~------~~l~~a~~~~~~~---~~i~ 86 (475)
T PLN02336 38 GKSVLELGAGIGRFTGELA--------KKA---------GQVIALDFI-----E------SVIKKNESINGHY---KNVK 86 (475)
T ss_pred CCEEEEeCCCcCHHHHHHH--------hhC---------CEEEEEeCC-----H------HHHHHHHHHhccC---CceE
Confidence 3589999999999998766 221 245555642 2 2111111111110 0123
Q ss_pred EEeecCCCccc--ccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 131 FFTGVPGSFYG--RLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 131 f~~~vpgSFy~--~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
|+.+ ++.. --+|++++|++++..++||++. .++..+|+.-++-|
T Consensus 87 ~~~~---d~~~~~~~~~~~~fD~I~~~~~l~~l~~-------------------------------~~~~~~l~~~~r~L 132 (475)
T PLN02336 87 FMCA---DVTSPDLNISDGSVDLIFSNWLLMYLSD-------------------------------KEVENLAERMVKWL 132 (475)
T ss_pred EEEe---cccccccCCCCCCEEEEehhhhHHhCCH-------------------------------HHHHHHHHHHHHhc
Confidence 4444 4422 1257899999999999999743 23345788888999
Q ss_pred ccCceEEEE
Q 017514 209 VAEGRMVLT 217 (370)
Q Consensus 209 ~~GG~lvl~ 217 (370)
+|||+|++.
T Consensus 133 k~gG~l~~~ 141 (475)
T PLN02336 133 KVGGYIFFR 141 (475)
T ss_pred CCCeEEEEE
Confidence 999999875
|
|
| >KOG2361 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00027 Score=66.46 Aligned_cols=198 Identities=17% Similarity=0.183 Sum_probs=112.5
Q ss_pred hhHhhhHHHHHHHHH--------hHHHHHHHHHhhcccCCCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCC
Q 017514 17 SYASNSLVQEKVISI--------AKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLP 88 (370)
Q Consensus 17 sY~~nS~~Q~~~~~~--------~~~~l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p 88 (370)
-|.+++..+...... -..+|.....++..-......+|+++|||.|...+.++ + ..+.|
T Consensus 30 ~y~~~~~k~wD~fy~~~~~rFfkdR~wL~~Efpel~~~~~~~~~~ilEvGCGvGNtvfPll--------~-----~~~n~ 96 (264)
T KOG2361|consen 30 KYEREASKYWDTFYKIHENRFFKDRNWLLREFPELLPVDEKSAETILEVGCGVGNTVFPLL--------K-----TSPNN 96 (264)
T ss_pred hhhcchhhhhhhhhhhccccccchhHHHHHhhHHhhCccccChhhheeeccCCCcccchhh--------h-----cCCCC
Confidence 355555555444432 34566666666554322234499999999997766665 2 22344
Q ss_pred cceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc--eEEeecCCCcccccCCCCceeEEEeccccccccCCCC
Q 017514 89 EFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ--CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPD 166 (370)
Q Consensus 89 ~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~--~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~ 166 (370)
.+.||+.|-. |.-.+-+++..+.+. .. .|+.=.-++=-..-++++|+|++.--+. ||-+|+
T Consensus 97 ~l~v~acDfs-----------p~Ai~~vk~~~~~~e---~~~~afv~Dlt~~~~~~~~~~~svD~it~IFv---LSAi~p 159 (264)
T KOG2361|consen 97 RLKVYACDFS-----------PRAIELVKKSSGYDE---SRVEAFVWDLTSPSLKEPPEEGSVDIITLIFV---LSAIHP 159 (264)
T ss_pred CeEEEEcCCC-----------hHHHHHHHhccccch---hhhcccceeccchhccCCCCcCccceEEEEEE---EeccCh
Confidence 5999999975 333333332211110 11 2222222222344456677777654443 344443
Q ss_pred CccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHH
Q 017514 167 GLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMV 246 (370)
Q Consensus 167 ~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv 246 (370)
. -+..-+..-.+=|+|||.|++-=.|+.+.. .+. -+
T Consensus 160 e----------------------------k~~~a~~nl~~llKPGG~llfrDYg~~Dla-----------qlR----F~- 195 (264)
T KOG2361|consen 160 E----------------------------KMQSVIKNLRTLLKPGGSLLFRDYGRYDLA-----------QLR----FK- 195 (264)
T ss_pred H----------------------------HHHHHHHHHHHHhCCCcEEEEeecccchHH-----------HHh----cc-
Confidence 2 122235555778999999999877765431 110 00
Q ss_pred hcCCcchhhhc-cCCcCcccCCHHHHHHHHHhcCceEEEEEEEE
Q 017514 247 SEGLIEEEKVN-CFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 289 (370)
Q Consensus 247 ~eG~i~~e~~d-~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~ 289 (370)
++-.|++..+- .=-.+.|+.+.+|++.++.+.| |...++++.
T Consensus 196 ~~~~i~~nfYVRgDGT~~YfF~~eeL~~~f~~ag-f~~~~~~~~ 238 (264)
T KOG2361|consen 196 KGQCISENFYVRGDGTRAYFFTEEELDELFTKAG-FEEVQLEVD 238 (264)
T ss_pred CCceeecceEEccCCceeeeccHHHHHHHHHhcc-cchhcccce
Confidence 33334433332 2236889999999999999999 887777654
|
|
| >KOG3010 consensus Methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.0003 Score=66.21 Aligned_cols=104 Identities=18% Similarity=0.286 Sum_probs=65.5
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCce
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (370)
.-.+.|+|||+|..++.+. +. + =+|+..|+- +...+...+... ..
T Consensus 34 h~~a~DvG~G~Gqa~~~ia--------e~--------~-k~VIatD~s-----------~~mL~~a~k~~~-------~~ 78 (261)
T KOG3010|consen 34 HRLAWDVGTGNGQAARGIA--------EH--------Y-KEVIATDVS-----------EAMLKVAKKHPP-------VT 78 (261)
T ss_pred cceEEEeccCCCcchHHHH--------Hh--------h-hhheeecCC-----------HHHHHHhhcCCC-------cc
Confidence 3489999999996665554 22 2 346677764 333222222111 11
Q ss_pred EEeecCCCcc----cccC-CCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 131 FFTGVPGSFY----GRLF-PRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRS 205 (370)
Q Consensus 131 f~~~vpgSFy----~~l~-p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra 205 (370)
| .=+|-++= ..|. +++|||++.+.-|+||. |+.+|++.-.
T Consensus 79 y-~~t~~~ms~~~~v~L~g~e~SVDlI~~Aqa~HWF----------------------------------dle~fy~~~~ 123 (261)
T KOG3010|consen 79 Y-CHTPSTMSSDEMVDLLGGEESVDLITAAQAVHWF----------------------------------DLERFYKEAY 123 (261)
T ss_pred c-ccCCccccccccccccCCCcceeeehhhhhHHhh----------------------------------chHHHHHHHH
Confidence 1 11233332 2344 69999999999999993 4556888888
Q ss_pred HhhccCceEEEEeeccCCC
Q 017514 206 EELVAEGRMVLTFLGRKSQ 224 (370)
Q Consensus 206 ~EL~~GG~lvl~~~g~~~~ 224 (370)
+-|++.|-++....=+++.
T Consensus 124 rvLRk~Gg~iavW~Y~dd~ 142 (261)
T KOG3010|consen 124 RVLRKDGGLIAVWNYNDDF 142 (261)
T ss_pred HHcCCCCCEEEEEEccCCC
Confidence 9999988777777766543
|
|
| >TIGR01983 UbiG ubiquinone biosynthesis O-methyltransferase | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00088 Score=61.66 Aligned_cols=159 Identities=13% Similarity=0.191 Sum_probs=84.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
...+|+|+|||+|..+..+. +. + ..+...|+. +.............. ...-
T Consensus 45 ~~~~vLdlG~G~G~~~~~l~--------~~----~-----~~v~~iD~s-----------~~~~~~a~~~~~~~~-~~~~ 95 (224)
T TIGR01983 45 FGLRVLDVGCGGGLLSEPLA--------RL----G-----ANVTGIDAS-----------EENIEVAKLHAKKDP-LLKI 95 (224)
T ss_pred CCCeEEEECCCCCHHHHHHH--------hc----C-----CeEEEEeCC-----------HHHHHHHHHHHHHcC-CCce
Confidence 46799999999998776543 11 1 347777764 222111111111000 0011
Q ss_pred eEEeecCCCcccccCC-CCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 130 CFFTGVPGSFYGRLFP-RNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p-~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
.|..+ ++-+-..+ ++++|++++..++|+... | ..+|+.-.+-|
T Consensus 96 ~~~~~---d~~~~~~~~~~~~D~i~~~~~l~~~~~-~--------------------------------~~~l~~~~~~L 139 (224)
T TIGR01983 96 EYRCT---SVEDLAEKGAKSFDVVTCMEVLEHVPD-P--------------------------------QAFIRACAQLL 139 (224)
T ss_pred EEEeC---CHHHhhcCCCCCccEEEehhHHHhCCC-H--------------------------------HHHHHHHHHhc
Confidence 23222 33222222 478999999999888533 1 22677777889
Q ss_pred ccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEE
Q 017514 209 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEV 288 (370)
Q Consensus 209 ~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~ 288 (370)
+|||.+++....++.. ......+. .++. .+.+... -.....+.+.+++.+.+++.| |+|..+.-
T Consensus 140 ~~gG~l~i~~~~~~~~-------~~~~~~~~---~~~~-~~~~~~~----~~~~~~~~~~~~l~~~l~~~G-~~i~~~~~ 203 (224)
T TIGR01983 140 KPGGILFFSTINRTPK-------SYLLAIVG---AEYI-LRIVPKG----THDWEKFIKPSELTSWLESAG-LRVKDVKG 203 (224)
T ss_pred CCCcEEEEEecCCCch-------HHHHHHHh---hhhh-hhcCCCC----cCChhhcCCHHHHHHHHHHcC-Ceeeeeee
Confidence 9999988776532210 01111111 0111 0111110 001113458899999999998 99987774
Q ss_pred E
Q 017514 289 S 289 (370)
Q Consensus 289 ~ 289 (370)
+
T Consensus 204 ~ 204 (224)
T TIGR01983 204 L 204 (224)
T ss_pred E
Confidence 4
|
This model represents an O-methyltransferase believed to act at two points in the ubiquinone biosynthetic pathway in bacteria (UbiG) and fungi (COQ3). A separate methylase (MenG/UbiE) catalyzes the single C-methylation step. The most commonly used names for genes in this family do not indicate whether this gene is an O-methyl, or C-methyl transferase. |
| >PRK05785 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00063 Score=63.69 Aligned_cols=74 Identities=19% Similarity=0.222 Sum_probs=47.4
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCce
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (370)
.-+|+|+|||+|.++..+. +++ ..+|+--|+- +.+.+.-.+ ..-
T Consensus 52 ~~~VLDlGcGtG~~~~~l~--------~~~--------~~~v~gvD~S-----------~~Ml~~a~~---------~~~ 95 (226)
T PRK05785 52 PKKVLDVAAGKGELSYHFK--------KVF--------KYYVVALDYA-----------ENMLKMNLV---------ADD 95 (226)
T ss_pred CCeEEEEcCCCCHHHHHHH--------Hhc--------CCEEEEECCC-----------HHHHHHHHh---------ccc
Confidence 5799999999998877554 221 1477888874 333221111 112
Q ss_pred EEeecCCCcccccCCCCceeEEEeccccccccC
Q 017514 131 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQ 163 (370)
Q Consensus 131 f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~ 163 (370)
++. +++-.-=||++|+|+++|+++|||+.+
T Consensus 96 ~~~---~d~~~lp~~d~sfD~v~~~~~l~~~~d 125 (226)
T PRK05785 96 KVV---GSFEALPFRDKSFDVVMSSFALHASDN 125 (226)
T ss_pred eEE---echhhCCCCCCCEEEEEecChhhccCC
Confidence 333 355333358999999999999999654
|
|
| >COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.0043 Score=60.07 Aligned_cols=71 Identities=23% Similarity=0.276 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHhhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcC-cccCCHHHHHH
Q 017514 195 RDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIP-QYTPSPAEIKS 273 (370)
Q Consensus 195 ~D~~~fL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P-~y~~s~eE~~~ 273 (370)
+.+..|++.-.+-|+|||+|++-..+....... ... .-.+.+.+| -+.||..++..
T Consensus 153 ~~~~~ff~~~~~~L~~~G~~llh~I~~~~~~~~----------~~~-------------~~i~~yiFPgG~lPs~~~i~~ 209 (283)
T COG2230 153 ENYDDFFKKVYALLKPGGRMLLHSITGPDQEFR----------RFP-------------DFIDKYIFPGGELPSISEILE 209 (283)
T ss_pred ccHHHHHHHHHhhcCCCceEEEEEecCCCcccc----------cch-------------HHHHHhCCCCCcCCCHHHHHH
Confidence 456669999999999999999999987764210 001 112233344 36689999999
Q ss_pred HHHhcCceEEEEEEEE
Q 017514 274 EVIKEGSFTIDHLEVS 289 (370)
Q Consensus 274 ~ie~~GsF~i~~le~~ 289 (370)
.+++.| |.+...+.+
T Consensus 210 ~~~~~~-~~v~~~~~~ 224 (283)
T COG2230 210 LASEAG-FVVLDVESL 224 (283)
T ss_pred HHHhcC-cEEehHhhh
Confidence 999998 766544433
|
|
| >TIGR00138 gidB 16S rRNA methyltransferase GidB | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00028 Score=63.89 Aligned_cols=128 Identities=20% Similarity=0.214 Sum_probs=73.1
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHH---HhhCCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILR---KQLGSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~---~~~~~~~~~~ 127 (370)
..+|+|+|||+|..++.+. ... |..+|+.-|.- +...+... ++.+.+
T Consensus 43 ~~~vLDiGcGtG~~s~~la--------~~~-------~~~~V~~iD~s-----------~~~~~~a~~~~~~~~~~---- 92 (181)
T TIGR00138 43 GKKVIDIGSGAGFPGIPLA--------IAR-------PELKLTLLESN-----------HKKVAFLREVKAELGLN---- 92 (181)
T ss_pred CCeEEEecCCCCccHHHHH--------HHC-------CCCeEEEEeCc-----------HHHHHHHHHHHHHhCCC----
Confidence 4799999999999888664 211 34678888875 22211111 111211
Q ss_pred CceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017514 128 GQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~E 207 (370)
+-.| +.++. ..+.+.+++|+++|.. +|++ | .+++.-.+-
T Consensus 93 ~i~~---i~~d~-~~~~~~~~fD~I~s~~-~~~~---~---------------------------------~~~~~~~~~ 131 (181)
T TIGR00138 93 NVEI---VNGRA-EDFQHEEQFDVITSRA-LASL---N---------------------------------VLLELTLNL 131 (181)
T ss_pred CeEE---Eecch-hhccccCCccEEEehh-hhCH---H---------------------------------HHHHHHHHh
Confidence 1123 33355 3355678999999864 3321 1 133333566
Q ss_pred hccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcC
Q 017514 208 LVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIP 262 (370)
Q Consensus 208 L~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P 262 (370)
|+|||++++.. |... ..-+..+...+..+|+ .+.+.++++.|
T Consensus 132 LkpgG~lvi~~-~~~~-----------~~~~~~~~e~~~~~~~-~~~~~~~~~~~ 173 (181)
T TIGR00138 132 LKVGGYFLAYK-GKKY-----------LDEIEEAKRKCQVLGV-EPLEVPPLTGP 173 (181)
T ss_pred cCCCCEEEEEc-CCCc-----------HHHHHHHHHhhhhcCc-eEeeccccCCC
Confidence 99999999874 2111 1234444466666774 45557788887
|
GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA. |
| >KOG1540 consensus Ubiquinone biosynthesis methyltransferase COQ5 [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.0004 Score=65.87 Aligned_cols=173 Identities=14% Similarity=0.212 Sum_probs=99.5
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhh-CCCCC-C
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASG-A 126 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~-~~~~~-~ 126 (370)
.+.++++|++||+|-.+++++..+-..- + . -+-+|...|.- |+....-+++. ...+. +
T Consensus 99 ~~~m~~lDvaGGTGDiaFril~~v~s~~-------~-~-~~~~V~v~Din-----------p~mL~vgkqRa~~~~l~~~ 158 (296)
T KOG1540|consen 99 GKGMKVLDVAGGTGDIAFRILRHVKSQF-------G-D-RESKVTVLDIN-----------PHMLAVGKQRAKKRPLKAS 158 (296)
T ss_pred CCCCeEEEecCCcchhHHHHHHhhcccc-------C-C-CCceEEEEeCC-----------HHHHHHHHHHHhhcCCCcC
Confidence 3569999999999999998873322221 1 1 23677778875 55443333222 11110 0
Q ss_pred CCceEEeecCCCccccc-CCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRL-FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRS 205 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l-~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra 205 (370)
.+-.+ +.|+- +.| ||++|.|...+++.+--..+++. .+.+||
T Consensus 159 ~~~~w---~~~dA-E~LpFdd~s~D~yTiafGIRN~th~~k-----------------~l~EAY---------------- 201 (296)
T KOG1540|consen 159 SRVEW---VEGDA-EDLPFDDDSFDAYTIAFGIRNVTHIQK-----------------ALREAY---------------- 201 (296)
T ss_pred CceEE---EeCCc-ccCCCCCCcceeEEEecceecCCCHHH-----------------HHHHHH----------------
Confidence 01233 33355 444 69999999999999876444332 344555
Q ss_pred HhhccCceEEEEeeccCCCCCCCch-hhhHH---HHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCce
Q 017514 206 EELVAEGRMVLTFLGRKSQDPSSKE-CCYIW---ELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSF 281 (370)
Q Consensus 206 ~EL~~GG~lvl~~~g~~~~~~~~~~-~~~~~---~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF 281 (370)
+-|||||++.+.-+..-+..+...- ..+.+ -.+.+.+....+.+.+=-|-+. -+|+.||+...|+++| |
T Consensus 202 RVLKpGGrf~cLeFskv~~~~l~~fy~~ysf~VlpvlG~~iagd~~sYqYLveSI~------rfp~qe~f~~miedaG-F 274 (296)
T KOG1540|consen 202 RVLKPGGRFSCLEFSKVENEPLKWFYDQYSFDVLPVLGEIIAGDRKSYQYLVESIR------RFPPQEEFASMIEDAG-F 274 (296)
T ss_pred HhcCCCcEEEEEEccccccHHHHHHHHhhhhhhhchhhHhhhhhHhhhhhHHhhhh------cCCCHHHHHHHHHHcC-C
Confidence 6799999999888877664221100 01112 2333344333333321111111 2688999999999999 7
Q ss_pred EEEE
Q 017514 282 TIDH 285 (370)
Q Consensus 282 ~i~~ 285 (370)
....
T Consensus 275 ~~~~ 278 (296)
T KOG1540|consen 275 SSVN 278 (296)
T ss_pred cccc
Confidence 6654
|
|
| >PRK11088 rrmA 23S rRNA methyltransferase A; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00059 Score=65.40 Aligned_cols=76 Identities=22% Similarity=0.262 Sum_probs=43.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
...+|+|+|||+|..+..+. +... .....+++-.|+- +.......+. .. .-
T Consensus 85 ~~~~vLDiGcG~G~~~~~l~--------~~~~----~~~~~~v~giD~s-----------~~~l~~A~~~-~~-----~~ 135 (272)
T PRK11088 85 KATALLDIGCGEGYYTHALA--------DALP----EITTMQLFGLDIS-----------KVAIKYAAKR-YP-----QV 135 (272)
T ss_pred CCCeEEEECCcCCHHHHHHH--------Hhcc----cccCCeEEEECCC-----------HHHHHHHHHh-CC-----CC
Confidence 34689999999999887665 2210 0012578888874 2222211111 11 22
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYS 157 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~a 157 (370)
.|..+ +..+--++++|+|+++|..+
T Consensus 136 ~~~~~---d~~~lp~~~~sfD~I~~~~~ 160 (272)
T PRK11088 136 TFCVA---SSHRLPFADQSLDAIIRIYA 160 (272)
T ss_pred eEEEe---ecccCCCcCCceeEEEEecC
Confidence 44444 44333367899999998653
|
|
| >KOG2940 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00023 Score=66.58 Aligned_cols=93 Identities=27% Similarity=0.462 Sum_probs=67.1
Q ss_pred CCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeccCC
Q 017514 144 FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKS 223 (370)
Q Consensus 144 ~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~~ 223 (370)
|-+||+|+++|+.++||..++|.. .......|||.|.++-.++|-+.
T Consensus 133 f~ens~DLiisSlslHW~NdLPg~---------------------------------m~~ck~~lKPDg~FiasmlggdT 179 (325)
T KOG2940|consen 133 FKENSVDLIISSLSLHWTNDLPGS---------------------------------MIQCKLALKPDGLFIASMLGGDT 179 (325)
T ss_pred ccccchhhhhhhhhhhhhccCchH---------------------------------HHHHHHhcCCCccchhHHhcccc
Confidence 578999999999999999999952 22335789999999999998552
Q ss_pred CCCCCchhhhHHHH-HHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEE
Q 017514 224 QDPSSKECCYIWEL-LATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLE 287 (370)
Q Consensus 224 ~~~~~~~~~~~~~~-l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le 287 (370)
++++ .+--|.+|..||=||+- .-|+ .-..++-..+...| |....+.
T Consensus 180 ----------LyELR~slqLAelER~GGiSph-----iSPf--~qvrDiG~LL~rAG-F~m~tvD 226 (325)
T KOG2940|consen 180 ----------LYELRCSLQLAELEREGGISPH-----ISPF--TQVRDIGNLLTRAG-FSMLTVD 226 (325)
T ss_pred ----------HHHHHHHhhHHHHHhccCCCCC-----cChh--hhhhhhhhHHhhcC-cccceec
Confidence 3442 45667888888876653 2232 24566777788888 7654443
|
|
| >PRK05134 bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00071 Score=62.88 Aligned_cols=95 Identities=12% Similarity=0.191 Sum_probs=57.2
Q ss_pred CCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeccCCC
Q 017514 145 PRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQ 224 (370)
Q Consensus 145 p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~~~ 224 (370)
+++.+|+++++..+++.... ..+|+.-.+-|+|||+|++...++...
T Consensus 111 ~~~~fD~Ii~~~~l~~~~~~---------------------------------~~~l~~~~~~L~~gG~l~v~~~~~~~~ 157 (233)
T PRK05134 111 HPGQFDVVTCMEMLEHVPDP---------------------------------ASFVRACAKLVKPGGLVFFSTLNRNLK 157 (233)
T ss_pred cCCCccEEEEhhHhhccCCH---------------------------------HHHHHHHHHHcCCCcEEEEEecCCChH
Confidence 56789999999888874321 125677788899999999887653211
Q ss_pred CCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEE
Q 017514 225 DPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEV 288 (370)
Q Consensus 225 ~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~ 288 (370)
........ .+.+..++ .. .......+.+++|+.+.+++.| |++.+..-
T Consensus 158 -------~~~~~~~~---~~~~~~~~-~~----~~~~~~~~~~~~~~~~~l~~~G-f~~v~~~~ 205 (233)
T PRK05134 158 -------SYLLAIVG---AEYVLRML-PK----GTHDYKKFIKPSELAAWLRQAG-LEVQDITG 205 (233)
T ss_pred -------HHHHHHhh---HHHHhhhc-Cc----ccCchhhcCCHHHHHHHHHHCC-CeEeeeee
Confidence 01111111 11111111 10 0111234678999999999999 98877653
|
|
| >PRK09489 rsmC 16S ribosomal RNA m2G1207 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00029 Score=70.09 Aligned_cols=107 Identities=16% Similarity=0.222 Sum_probs=66.2
Q ss_pred eEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCceE
Q 017514 52 VAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCF 131 (370)
Q Consensus 52 ~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~f 131 (370)
-+|+|+|||+|..++.+. +++ |..+|+..|.. - ..+..-..... ..+ . ...+
T Consensus 198 g~VLDlGCG~G~ls~~la--------~~~-------p~~~v~~vDis---~----~Al~~A~~nl~-~n~--l---~~~~ 249 (342)
T PRK09489 198 GKVLDVGCGAGVLSAVLA--------RHS-------PKIRLTLSDVS---A----AALESSRATLA-ANG--L---EGEV 249 (342)
T ss_pred CeEEEeccCcCHHHHHHH--------HhC-------CCCEEEEEECC---H----HHHHHHHHHHH-HcC--C---CCEE
Confidence 489999999998877555 331 55789999985 1 11111111111 111 1 1122
Q ss_pred EeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 017514 132 FTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAE 211 (370)
Q Consensus 132 ~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~G 211 (370)
++++.+.. .++++|+++|+-.+||.-.. . ..+...|++.=++-|+||
T Consensus 250 ---~~~D~~~~--~~~~fDlIvsNPPFH~g~~~----------------~------------~~~~~~~i~~a~~~Lkpg 296 (342)
T PRK09489 250 ---FASNVFSD--IKGRFDMIISNPPFHDGIQT----------------S------------LDAAQTLIRGAVRHLNSG 296 (342)
T ss_pred ---EEcccccc--cCCCccEEEECCCccCCccc----------------c------------HHHHHHHHHHHHHhcCcC
Confidence 23455543 36789999999999973210 0 124456888888999999
Q ss_pred ceEEEEee
Q 017514 212 GRMVLTFL 219 (370)
Q Consensus 212 G~lvl~~~ 219 (370)
|.|+++..
T Consensus 297 G~L~iVan 304 (342)
T PRK09489 297 GELRIVAN 304 (342)
T ss_pred CEEEEEEe
Confidence 99998754
|
|
| >PF13649 Methyltransf_25: Methyltransferase domain; PDB: 3BXO_B 3GGD_A 3PX2_A 3PX3_A 3PFH_D 3PFG_A 1Y8C_A | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00024 Score=57.43 Aligned_cols=98 Identities=22% Similarity=0.291 Sum_probs=59.3
Q ss_pred EEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhC-CCCCCCCceEE
Q 017514 54 IADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLG-SASGAAGQCFF 132 (370)
Q Consensus 54 IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~-~~~~~~~~~f~ 132 (370)
|+|+|||+|.++..+. +.+ ...|+.+++.-|+- +...+..++... ..+ ..-|+
T Consensus 1 ILDlgcG~G~~~~~l~--------~~~----~~~~~~~~~gvD~s-----------~~~l~~~~~~~~~~~~---~~~~~ 54 (101)
T PF13649_consen 1 ILDLGCGTGRVTRALA--------RRF----DAGPSSRVIGVDIS-----------PEMLELAKKRFSEDGP---KVRFV 54 (101)
T ss_dssp -EEET-TTSHHHHHHH--------HHS---------SEEEEEES------------HHHHHHHHHHSHHTTT---TSEEE
T ss_pred CEEeecCCcHHHHHHH--------HHh----hhcccceEEEEECC-----------HHHHHHHHHhchhcCC---ceEEE
Confidence 7999999999988777 222 11145888999985 433332222211 111 23455
Q ss_pred eecCCCcccccC-CCCceeEEEeccc-cccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 017514 133 TGVPGSFYGRLF-PRNSVHLFHSSYS-LQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 210 (370)
Q Consensus 133 ~~vpgSFy~~l~-p~~sv~~~~S~~a-lhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~ 210 (370)
.+ ++ ..+- +.+++|+++++.+ +|++++ +++..+|+.-++=|+|
T Consensus 55 ~~---D~-~~l~~~~~~~D~v~~~~~~~~~~~~-------------------------------~~~~~ll~~~~~~l~p 99 (101)
T PF13649_consen 55 QA---DA-RDLPFSDGKFDLVVCSGLSLHHLSP-------------------------------EELEALLRRIARLLRP 99 (101)
T ss_dssp ES---CT-TCHHHHSSSEEEEEE-TTGGGGSSH-------------------------------HHHHHHHHHHHHTEEE
T ss_pred EC---CH-hHCcccCCCeeEEEEcCCccCCCCH-------------------------------HHHHHHHHHHHHHhCC
Confidence 55 55 3333 6779999999766 998654 4566688888999999
Q ss_pred Cc
Q 017514 211 EG 212 (370)
Q Consensus 211 GG 212 (370)
||
T Consensus 100 gG 101 (101)
T PF13649_consen 100 GG 101 (101)
T ss_dssp EE
T ss_pred CC
Confidence 98
|
|
| >PF08003 Methyltransf_9: Protein of unknown function (DUF1698); InterPro: IPR010017 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0011 Score=64.66 Aligned_cols=147 Identities=22% Similarity=0.262 Sum_probs=100.1
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCce
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (370)
--+|+|+||+.|.-++.+. .+ | | -.|+--| |+=.|..=|+.+..+. +.+ ..+
T Consensus 116 gk~VLDIGC~nGY~~frM~--------~~----G---A-~~ViGiD-P~~lf~~QF~~i~~~l-------g~~----~~~ 167 (315)
T PF08003_consen 116 GKRVLDIGCNNGYYSFRML--------GR----G---A-KSVIGID-PSPLFYLQFEAIKHFL-------GQD----PPV 167 (315)
T ss_pred CCEEEEecCCCcHHHHHHh--------hc----C---C-CEEEEEC-CChHHHHHHHHHHHHh-------CCC----ccE
Confidence 4699999999999998776 22 2 3 3455555 5556666666665431 222 345
Q ss_pred EEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 017514 131 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 210 (370)
Q Consensus 131 f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~ 210 (370)
|.. |-.. +.|.+.+++|.+||.--|=-++. | -. .|+.-..-|+|
T Consensus 168 ~~l--plgv-E~Lp~~~~FDtVF~MGVLYHrr~-P-----------------l~---------------~L~~Lk~~L~~ 211 (315)
T PF08003_consen 168 FEL--PLGV-EDLPNLGAFDTVFSMGVLYHRRS-P-----------------LD---------------HLKQLKDSLRP 211 (315)
T ss_pred EEc--Ccch-hhccccCCcCEEEEeeehhccCC-H-----------------HH---------------HHHHHHHhhCC
Confidence 544 2223 56666789999999866655443 3 22 35555678999
Q ss_pred CceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEE
Q 017514 211 EGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTI 283 (370)
Q Consensus 211 GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i 283 (370)
||.|||..+..+..... -++.++.+..|+-=++.||..-++..+++.| |+-
T Consensus 212 gGeLvLETlvi~g~~~~---------------------~L~P~~rYa~m~nv~FiPs~~~L~~wl~r~g-F~~ 262 (315)
T PF08003_consen 212 GGELVLETLVIDGDENT---------------------VLVPEDRYAKMRNVWFIPSVAALKNWLERAG-FKD 262 (315)
T ss_pred CCEEEEEEeeecCCCce---------------------EEccCCcccCCCceEEeCCHHHHHHHHHHcC-Cce
Confidence 99999999876644211 2356666788888889999999999999999 753
|
The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. This entry represents a set of bacterial AdoMet-dependent tRNA (mo5U34)-methyltransferases. These enzymes catalyse the conversion of 5-hydroxyuridine (ho5U) to 5-methoxyuridine (mo5U) at the wobble position (34) of tRNA []. The 5-methoxyuridine is subsequently converted to uridine-5-oxyacetic acid, a modified nucleoside that is apparently necessary for the efficient decoding of G-ending Pro, Ala, and Val codons in these organisms [].; GO: 0016300 tRNA (uracil) methyltransferase activity, 0002098 tRNA wobble uridine modification |
| >PRK15001 SAM-dependent 23S ribosomal RNA mG1835 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00058 Score=68.84 Aligned_cols=111 Identities=15% Similarity=0.110 Sum_probs=65.0
Q ss_pred eEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCceE
Q 017514 52 VAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCF 131 (370)
Q Consensus 52 ~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~f 131 (370)
-+|+|+|||+|..++.+. +++ |..+|+..|.. ...+..-..-.. ..+.. +..+-.|
T Consensus 230 ~~VLDLGCGtGvi~i~la--------~~~-------P~~~V~~vD~S-------~~Av~~A~~N~~-~n~~~-~~~~v~~ 285 (378)
T PRK15001 230 GEIVDLGCGNGVIGLTLL--------DKN-------PQAKVVFVDES-------PMAVASSRLNVE-TNMPE-ALDRCEF 285 (378)
T ss_pred CeEEEEeccccHHHHHHH--------HhC-------CCCEEEEEECC-------HHHHHHHHHHHH-HcCcc-cCceEEE
Confidence 489999999998877555 332 67899999985 111111111111 11110 0001123
Q ss_pred EeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 017514 132 FTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAE 211 (370)
Q Consensus 132 ~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~G 211 (370)
. .++.+..+ ++.++|+++|+--+|+.-.++. .+ ...+++.=.+-|+||
T Consensus 286 ~---~~D~l~~~-~~~~fDlIlsNPPfh~~~~~~~-----------------~i-----------a~~l~~~a~~~LkpG 333 (378)
T PRK15001 286 M---INNALSGV-EPFRFNAVLCNPPFHQQHALTD-----------------NV-----------AWEMFHHARRCLKIN 333 (378)
T ss_pred E---EccccccC-CCCCEEEEEECcCcccCccCCH-----------------HH-----------HHHHHHHHHHhcccC
Confidence 2 33555544 5678999999988887433221 11 123555556789999
Q ss_pred ceEEEEe
Q 017514 212 GRMVLTF 218 (370)
Q Consensus 212 G~lvl~~ 218 (370)
|.|+++.
T Consensus 334 G~L~iV~ 340 (378)
T PRK15001 334 GELYIVA 340 (378)
T ss_pred CEEEEEE
Confidence 9999985
|
|
| >TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0069 Score=56.31 Aligned_cols=145 Identities=18% Similarity=0.187 Sum_probs=85.0
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCC------
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSAS------ 124 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~------ 124 (370)
.-+|+|+|||.|+|++.+. ++ | .+|+--|+. +.-.+...++.+...
T Consensus 35 ~~rvLd~GCG~G~da~~LA--------~~----G-----~~V~gvD~S-----------~~Ai~~~~~~~~~~~~~~~~~ 86 (213)
T TIGR03840 35 GARVFVPLCGKSLDLAWLA--------EQ----G-----HRVLGVELS-----------EIAVEQFFAENGLTPTVTQQG 86 (213)
T ss_pred CCeEEEeCCCchhHHHHHH--------hC----C-----CeEEEEeCC-----------HHHHHHHHHHcCCCcceeccc
Confidence 4699999999999999877 32 2 677777775 222222111111100
Q ss_pred -----CCCCceEEeecCCCcccccC-CCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHH
Q 017514 125 -----GAAGQCFFTGVPGSFYGRLF-PRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFS 198 (370)
Q Consensus 125 -----~~~~~~f~~~vpgSFy~~l~-p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~ 198 (370)
...+--|..+ +|++--. +...+|.++-..++| .+|+ .+..
T Consensus 87 ~~~~~~~~~v~~~~~---D~~~~~~~~~~~fD~i~D~~~~~---~l~~----------------------------~~R~ 132 (213)
T TIGR03840 87 EFTRYRAGNIEIFCG---DFFALTAADLGPVDAVYDRAALI---ALPE----------------------------EMRQ 132 (213)
T ss_pred cceeeecCceEEEEc---cCCCCCcccCCCcCEEEechhhc---cCCH----------------------------HHHH
Confidence 0001122222 5543211 124578888877776 3443 2334
Q ss_pred HHHHHHHHhhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhc
Q 017514 199 LFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKE 278 (370)
Q Consensus 199 ~fL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~ 278 (370)
.+++.-.+-|+|||++++..+..+.... .-|-|.-+++|+++.+..
T Consensus 133 ~~~~~l~~lLkpgG~~ll~~~~~~~~~~---------------------------------~gpp~~~~~~eL~~~f~~- 178 (213)
T TIGR03840 133 RYAAHLLALLPPGARQLLITLDYDQSEM---------------------------------AGPPFSVSPAEVEALYGG- 178 (213)
T ss_pred HHHHHHHHHcCCCCeEEEEEEEcCCCCC---------------------------------CCcCCCCCHHHHHHHhcC-
Confidence 4677788999999987777765432210 114478899999998863
Q ss_pred CceEEEEEEEEeec
Q 017514 279 GSFTIDHLEVSEVN 292 (370)
Q Consensus 279 GsF~i~~le~~~~~ 292 (370)
.|+|+.++-.+.+
T Consensus 179 -~~~i~~~~~~~~~ 191 (213)
T TIGR03840 179 -HYEIELLESRDVL 191 (213)
T ss_pred -CceEEEEeecccc
Confidence 3888877765533
|
Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity. |
| >KOG1541 consensus Predicted protein carboxyl methylase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00079 Score=62.72 Aligned_cols=137 Identities=22% Similarity=0.252 Sum_probs=84.4
Q ss_pred chhHhhhHH---HHHHHHHhHHHHHHHHHhhcccCCCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceE
Q 017514 16 TSYASNSLV---QEKVISIAKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQV 92 (370)
Q Consensus 16 ~sY~~nS~~---Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v 92 (370)
.-|.+||.+ |..+.+.++.++ ... .+++--|+|+|||+|--+-.+- .+.-++
T Consensus 21 ~kYt~nsri~~IQ~em~eRaLELL-------alp-~~~~~~iLDIGCGsGLSg~vL~-----------------~~Gh~w 75 (270)
T KOG1541|consen 21 PKYTQNSRIVLIQAEMAERALELL-------ALP-GPKSGLILDIGCGSGLSGSVLS-----------------DSGHQW 75 (270)
T ss_pred hhccccceeeeehHHHHHHHHHHh-------hCC-CCCCcEEEEeccCCCcchheec-----------------cCCceE
Confidence 568889876 555554444433 221 3468899999999996543221 123667
Q ss_pred EeCCCCCCchHHHHHhhHHHHHHHH-HhhCCCCCCCCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCC
Q 017514 93 FLNDLPGNDFNTIFRSLASFQKILR-KQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESN 171 (370)
Q Consensus 93 ~~nDlp~NDFntLF~~l~~~~~~~~-~~~~~~~~~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~n 171 (370)
+--|.. |++.+--. .+...++ -.--+|- +==|+++++|-++|-.|+|||=..-+...
T Consensus 76 iGvDiS-----------psML~~a~~~e~egdl----il~DMG~-----GlpfrpGtFDg~ISISAvQWLcnA~~s~~-- 133 (270)
T KOG1541|consen 76 IGVDIS-----------PSMLEQAVERELEGDL----ILCDMGE-----GLPFRPGTFDGVISISAVQWLCNADKSLH-- 133 (270)
T ss_pred EeecCC-----------HHHHHHHHHhhhhcCe----eeeecCC-----CCCCCCCccceEEEeeeeeeecccCcccc--
Confidence 777775 54433221 2211111 0111221 12259999999999999999765432111
Q ss_pred CceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEee
Q 017514 172 KGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFL 219 (370)
Q Consensus 172 k~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~ 219 (370)
.+ ++.+.+|+..-..-|++|++-|+.+-
T Consensus 134 -----------~P---------~~Rl~~FF~tLy~~l~rg~raV~QfY 161 (270)
T KOG1541|consen 134 -----------VP---------KKRLLRFFGTLYSCLKRGARAVLQFY 161 (270)
T ss_pred -----------Ch---------HHHHHHHhhhhhhhhccCceeEEEec
Confidence 11 26677899999999999999999985
|
|
| >TIGR03587 Pse_Me-ase pseudaminic acid biosynthesis-associated methylase | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.002 Score=59.42 Aligned_cols=105 Identities=19% Similarity=0.283 Sum_probs=61.2
Q ss_pred CCchhHhhhHHHHHHHHHhHHHHHHHHHhhcccCCCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEE
Q 017514 14 GGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVF 93 (370)
Q Consensus 14 G~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~ 93 (370)
|.. |-+....+.. ......++.+.+..+ +..-+|+|+|||+|.++..+. +. .|..+++
T Consensus 14 g~~-~~~rn~~~~~-~~~~~~~~~~~l~~~-----~~~~~VLDiGCG~G~~~~~L~--------~~-------~~~~~v~ 71 (204)
T TIGR03587 14 GKE-YIDRNSRQSL-VAAKLAMFARALNRL-----PKIASILELGANIGMNLAALK--------RL-------LPFKHIY 71 (204)
T ss_pred cch-hhhccccHHH-HHHHHHHHHHHHHhc-----CCCCcEEEEecCCCHHHHHHH--------Hh-------CCCCeEE
Confidence 544 4444433322 333455566665433 234689999999998877554 22 1336777
Q ss_pred eCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCceEEeecCCCcccccCCCCceeEEEeccccccc
Q 017514 94 LNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWL 161 (370)
Q Consensus 94 ~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWl 161 (370)
.-|+- +......++... ...+.. ++..+ -+|++++|++++..+||++
T Consensus 72 giDiS-----------~~~l~~A~~~~~------~~~~~~---~d~~~-~~~~~sfD~V~~~~vL~hl 118 (204)
T TIGR03587 72 GVEIN-----------EYAVEKAKAYLP------NINIIQ---GSLFD-PFKDNFFDLVLTKGVLIHI 118 (204)
T ss_pred EEECC-----------HHHHHHHHhhCC------CCcEEE---eeccC-CCCCCCEEEEEECChhhhC
Confidence 77875 333222222111 112333 35555 5789999999999999876
|
Members of this small clade are methyltransferases of the pfam08241 family and are observed within operons for the biosynthesis of pseudaminic acid, a component of exopolysaccharide and flagellin glycosyl modifications. Notable among these genomes is Pseudomonas fluorescens PfO-1. Possibly one of the two hydroxyl groups of pseudaminic acid, at positions 4 and 8 is converted to a methoxy group by this enzyme |
| >TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00061 Score=56.13 Aligned_cols=21 Identities=29% Similarity=0.361 Sum_probs=18.3
Q ss_pred HHHHHHHHhhccCceEEEEee
Q 017514 199 LFLKCRSEELVAEGRMVLTFL 219 (370)
Q Consensus 199 ~fL~~Ra~EL~~GG~lvl~~~ 219 (370)
.+++.-.+.|+|||.+++.+.
T Consensus 103 ~~l~~~~~~Lk~gG~li~~~~ 123 (124)
T TIGR02469 103 EILEAIWRRLRPGGRIVLNAI 123 (124)
T ss_pred HHHHHHHHHcCCCCEEEEEec
Confidence 578888999999999999863
|
This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL. |
| >PLN02585 magnesium protoporphyrin IX methyltransferase | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0075 Score=59.46 Aligned_cols=27 Identities=19% Similarity=0.447 Sum_probs=23.0
Q ss_pred cccCCHHHHHHHHHhcCceEEEEEEEEe
Q 017514 263 QYTPSPAEIKSEVIKEGSFTIDHLEVSE 290 (370)
Q Consensus 263 ~y~~s~eE~~~~ie~~GsF~i~~le~~~ 290 (370)
.|+.+.+|++..+++.| |+|.+.+...
T Consensus 275 ~y~~s~eel~~lL~~AG-f~v~~~~~~~ 301 (315)
T PLN02585 275 AYLHAEADVERALKKAG-WKVARREMTA 301 (315)
T ss_pred eeeCCHHHHHHHHHHCC-CEEEEEEEee
Confidence 46779999999999999 9998777654
|
|
| >TIGR00091 tRNA (guanine-N(7)-)-methyltransferase | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0018 Score=59.04 Aligned_cols=112 Identities=17% Similarity=0.215 Sum_probs=66.8
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhh-CCCCCCCCc
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAAGQ 129 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~-~~~~~~~~~ 129 (370)
.-+|+|+|||+|..++.+. +++ |..+|+.-|+- +.......+.. ..+. .+
T Consensus 17 ~~~ilDiGcG~G~~~~~la--------~~~-------p~~~v~gvD~~-----------~~~l~~a~~~~~~~~l---~n 67 (194)
T TIGR00091 17 APLHLEIGCGKGRFLIDMA--------KQN-------PDKNFLGIEIH-----------TPIVLAANNKANKLGL---KN 67 (194)
T ss_pred CceEEEeCCCccHHHHHHH--------HhC-------CCCCEEEEEee-----------HHHHHHHHHHHHHhCC---CC
Confidence 3589999999999887666 321 55778888874 22211111110 1111 23
Q ss_pred eEEeecCCCcc---cccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 130 CFFTGVPGSFY---GRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 130 ~f~~~vpgSFy---~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
+- -+-++.. ..++|++++|.++.++..+|..+ +. .|..+. ...||+.=++
T Consensus 68 i~--~i~~d~~~~~~~~~~~~~~d~v~~~~pdpw~k~-~h----~~~r~~--------------------~~~~l~~~~r 120 (194)
T TIGR00091 68 LH--VLCGDANELLDKFFPDGSLSKVFLNFPDPWPKK-RH----NKRRIT--------------------QPHFLKEYAN 120 (194)
T ss_pred EE--EEccCHHHHHHhhCCCCceeEEEEECCCcCCCC-Cc----cccccC--------------------CHHHHHHHHH
Confidence 22 1333543 34467889999999999999432 11 011110 1237777789
Q ss_pred hhccCceEEEEe
Q 017514 207 ELVAEGRMVLTF 218 (370)
Q Consensus 207 EL~~GG~lvl~~ 218 (370)
-|+|||.+++..
T Consensus 121 ~LkpgG~l~~~t 132 (194)
T TIGR00091 121 VLKKGGVIHFKT 132 (194)
T ss_pred HhCCCCEEEEEe
Confidence 999999998876
|
In E. coli, this protein flanks the DNA repair protein MutY, also called micA. |
| >PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0014 Score=60.59 Aligned_cols=109 Identities=17% Similarity=0.237 Sum_probs=67.1
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCce
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (370)
.-+|+|+|||+|..|..++ ++. + +.-+|+.-|+-. .+ .++ +-.
T Consensus 52 ~~~VLDlG~GtG~~t~~l~--------~~~---~---~~~~V~aVDi~~--~~----~~~-----------------~v~ 94 (209)
T PRK11188 52 GMTVVDLGAAPGGWSQYAV--------TQI---G---DKGRVIACDILP--MD----PIV-----------------GVD 94 (209)
T ss_pred CCEEEEEcccCCHHHHHHH--------HHc---C---CCceEEEEeccc--cc----CCC-----------------CcE
Confidence 4589999999999877666 321 1 235677777632 10 000 113
Q ss_pred EEeecCCCcccc--------cCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHH
Q 017514 131 FFTGVPGSFYGR--------LFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLK 202 (370)
Q Consensus 131 f~~~vpgSFy~~--------l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~ 202 (370)
|+.| ++... -++++++|+++|..+.||... |. .+ . ..+ .......|+
T Consensus 95 ~i~~---D~~~~~~~~~i~~~~~~~~~D~V~S~~~~~~~g~-~~--~d-------------~-----~~~-~~~~~~~L~ 149 (209)
T PRK11188 95 FLQG---DFRDELVLKALLERVGDSKVQVVMSDMAPNMSGT-PA--VD-------------I-----PRA-MYLVELALD 149 (209)
T ss_pred EEec---CCCChHHHHHHHHHhCCCCCCEEecCCCCccCCC-hH--HH-------------H-----HHH-HHHHHHHHH
Confidence 3333 66542 257889999999999999432 21 00 0 000 111346788
Q ss_pred HHHHhhccCceEEEEeecc
Q 017514 203 CRSEELVAEGRMVLTFLGR 221 (370)
Q Consensus 203 ~Ra~EL~~GG~lvl~~~g~ 221 (370)
.=.+-|+|||.|++..+..
T Consensus 150 ~~~~~LkpGG~~vi~~~~~ 168 (209)
T PRK11188 150 MCRDVLAPGGSFVVKVFQG 168 (209)
T ss_pred HHHHHcCCCCEEEEEEecC
Confidence 8889999999999976543
|
|
| >TIGR00537 hemK_rel_arch HemK-related putative methylase | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0013 Score=58.85 Aligned_cols=123 Identities=15% Similarity=0.117 Sum_probs=68.5
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhC-CCCCCCCc
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLG-SASGAAGQ 129 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~-~~~~~~~~ 129 (370)
.-+|+|+|||+|..++.+. +. + + +|+..|+- +.......+... .+. ..
T Consensus 20 ~~~vLdlG~G~G~~~~~l~--------~~----~---~--~v~~vD~s-----------~~~~~~a~~~~~~~~~---~~ 68 (179)
T TIGR00537 20 PDDVLEIGAGTGLVAIRLK--------GK----G---K--CILTTDIN-----------PFAVKELRENAKLNNV---GL 68 (179)
T ss_pred CCeEEEeCCChhHHHHHHH--------hc----C---C--EEEEEECC-----------HHHHHHHHHHHHHcCC---ce
Confidence 3579999999999877655 22 1 2 78888875 433332222111 111 11
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
.+ +.+++++. +.+++|+++|+..+|.....+.. ++..++-.. ..+ .-...+..||+.=.+-|+
T Consensus 69 ~~---~~~d~~~~--~~~~fD~Vi~n~p~~~~~~~~~~--~~~~~~~~~-~~~---------~~~~~~~~~l~~~~~~Lk 131 (179)
T TIGR00537 69 DV---VMTDLFKG--VRGKFDVILFNPPYLPLEDDLRR--GDWLDVAID-GGK---------DGRKVIDRFLDELPEILK 131 (179)
T ss_pred EE---EEcccccc--cCCcccEEEECCCCCCCcchhcc--cchhhhhhh-cCC---------chHHHHHHHHHhHHHhhC
Confidence 22 33466553 34599999999888765432210 000000000 000 001224568888889999
Q ss_pred cCceEEEEeecc
Q 017514 210 AEGRMVLTFLGR 221 (370)
Q Consensus 210 ~GG~lvl~~~g~ 221 (370)
|||++++...+.
T Consensus 132 ~gG~~~~~~~~~ 143 (179)
T TIGR00537 132 EGGRVQLIQSSL 143 (179)
T ss_pred CCCEEEEEEecc
Confidence 999999987543
|
The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes. |
| >PF05401 NodS: Nodulation protein S (NodS); InterPro: IPR008715 This entry consists of nodulation S (NodS) proteins | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00095 Score=61.25 Aligned_cols=106 Identities=21% Similarity=0.289 Sum_probs=60.9
Q ss_pred CCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCC
Q 017514 48 SPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAA 127 (370)
Q Consensus 48 ~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~ 127 (370)
.+..-+++|+|||.|..|..+. .+| -.+.-.|.. +.-...-.+......
T Consensus 41 ~~ry~~alEvGCs~G~lT~~LA--------~rC---------d~LlavDis-----------~~Al~~Ar~Rl~~~~--- 89 (201)
T PF05401_consen 41 RRRYRRALEVGCSIGVLTERLA--------PRC---------DRLLAVDIS-----------PRALARARERLAGLP--- 89 (201)
T ss_dssp TSSEEEEEEE--TTSHHHHHHG--------GGE---------EEEEEEES------------HHHHHHHHHHTTT-S---
T ss_pred ccccceeEecCCCccHHHHHHH--------Hhh---------CceEEEeCC-----------HHHHHHHHHhcCCCC---
Confidence 3567889999999999998776 333 233344442 111111111111100
Q ss_pred CceEEee-cCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 128 GQCFFTG-VPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 128 ~~~f~~~-vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
+-.|..+ +| +..|++++|+++-+-.+++|+.. .|+..++..-.+
T Consensus 90 ~V~~~~~dvp-----~~~P~~~FDLIV~SEVlYYL~~~------------------------------~~L~~~l~~l~~ 134 (201)
T PF05401_consen 90 HVEWIQADVP-----EFWPEGRFDLIVLSEVLYYLDDA------------------------------EDLRAALDRLVA 134 (201)
T ss_dssp SEEEEES-TT-----T---SS-EEEEEEES-GGGSSSH------------------------------HHHHHHHHHHHH
T ss_pred CeEEEECcCC-----CCCCCCCeeEEEEehHhHcCCCH------------------------------HHHHHHHHHHHH
Confidence 1122222 44 23589999999999999998752 356667888889
Q ss_pred hhccCceEEEEee
Q 017514 207 ELVAEGRMVLTFL 219 (370)
Q Consensus 207 EL~~GG~lvl~~~ 219 (370)
-|.|||.||+.-.
T Consensus 135 ~L~pgG~LV~g~~ 147 (201)
T PF05401_consen 135 ALAPGGHLVFGHA 147 (201)
T ss_dssp TEEEEEEEEEEEE
T ss_pred HhCCCCEEEEEEe
Confidence 9999999999654
|
The products of the rhizobial nodulation genes are involved in the biosynthesis of lipochitin oligosaccharides (LCOs), which are host-specific signal molecules required for nodule formation. NodS is an S-adenosyl-L-methionine (SAM)-dependent methyltransferase involved in N methylation of LCOs. NodS uses N-deacetylated chitooligosaccharides, the products of the NodBC proteins, as its methyl acceptors [].; GO: 0008757 S-adenosylmethionine-dependent methyltransferase activity, 0009312 oligosaccharide biosynthetic process, 0009877 nodulation; PDB: 3OFK_D 3OFJ_A. |
| >KOG1270 consensus Methyltransferases [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00099 Score=63.47 Aligned_cols=77 Identities=25% Similarity=0.337 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHhhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHH
Q 017514 195 RDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSE 274 (370)
Q Consensus 195 ~D~~~fL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ 274 (370)
+|...||.+-.+-|+|||+++++..-|.-.-... .+ .+.+.....|-.|.- .+--+.+++|+..+
T Consensus 172 ~dp~~~l~~l~~~lkP~G~lfittinrt~lS~~~----~i--~~~E~vl~ivp~Gth---------~~ekfi~p~e~~~~ 236 (282)
T KOG1270|consen 172 KDPQEFLNCLSALLKPNGRLFITTINRTILSFAG----TI--FLAEIVLRIVPKGTH---------TWEKFINPEELTSI 236 (282)
T ss_pred hCHHHHHHHHHHHhCCCCceEeeehhhhHHHhhc----cc--cHHHHHHHhcCCCCc---------CHHHcCCHHHHHHH
Confidence 4666799999999999999999998664221000 01 223333336666643 34457889999999
Q ss_pred HHhcCceEEEEEE
Q 017514 275 VIKEGSFTIDHLE 287 (370)
Q Consensus 275 ie~~GsF~i~~le 287 (370)
++.++ +.++.+.
T Consensus 237 l~~~~-~~v~~v~ 248 (282)
T KOG1270|consen 237 LNANG-AQVNDVV 248 (282)
T ss_pred HHhcC-cchhhhh
Confidence 99987 6665554
|
|
| >PRK13255 thiopurine S-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.016 Score=54.16 Aligned_cols=160 Identities=19% Similarity=0.247 Sum_probs=88.4
Q ss_pred hHHHHHHHHHhhcccCCCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHH
Q 017514 32 AKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLAS 111 (370)
Q Consensus 32 ~~~~l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~ 111 (370)
.-|.|.+.+..+.. +..-||+|.|||.|+|++.+. ++ | .+|+--|+. +.
T Consensus 22 p~~~L~~~~~~~~~---~~~~rvL~~gCG~G~da~~LA--------~~----G-----~~V~avD~s-----------~~ 70 (218)
T PRK13255 22 VNPLLQKYWPALAL---PAGSRVLVPLCGKSLDMLWLA--------EQ----G-----HEVLGVELS-----------EL 70 (218)
T ss_pred CCHHHHHHHHhhCC---CCCCeEEEeCCCChHhHHHHH--------hC----C-----CeEEEEccC-----------HH
Confidence 44555555543322 234699999999999999877 22 2 667777765 22
Q ss_pred HHHHHHHhhCCCC-----C------CCCceEEeecCCCcccccC-CCCceeEEEeccccccccCCCCCccCCCceeeecC
Q 017514 112 FQKILRKQLGSAS-----G------AAGQCFFTGVPGSFYGRLF-PRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMAS 179 (370)
Q Consensus 112 ~~~~~~~~~~~~~-----~------~~~~~f~~~vpgSFy~~l~-p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~ 179 (370)
-.+...++.+..+ + ...-.+..+ +++.--. +...+|+++...++|= +|+
T Consensus 71 Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~---D~~~l~~~~~~~fd~v~D~~~~~~---l~~------------- 131 (218)
T PRK13255 71 AVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCG---DFFALTAADLADVDAVYDRAALIA---LPE------------- 131 (218)
T ss_pred HHHHHHHHcCCCccccccccccccccCceEEEEC---cccCCCcccCCCeeEEEehHhHhh---CCH-------------
Confidence 1111111111100 0 000112222 4433211 1136778887777773 332
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccC
Q 017514 180 TSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCF 259 (370)
Q Consensus 180 ~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f 259 (370)
.+...+++.-++-|+|||++++......+...
T Consensus 132 ---------------~~R~~~~~~l~~lL~pgG~~~l~~~~~~~~~~--------------------------------- 163 (218)
T PRK13255 132 ---------------EMRERYVQQLAALLPAGCRGLLVTLDYPQEEL--------------------------------- 163 (218)
T ss_pred ---------------HHHHHHHHHHHHHcCCCCeEEEEEEEeCCccC---------------------------------
Confidence 23344666778999999986665554332110
Q ss_pred CcCcccCCHHHHHHHHHhcCceEEEEEEEEee
Q 017514 260 NIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEV 291 (370)
Q Consensus 260 ~~P~y~~s~eE~~~~ie~~GsF~i~~le~~~~ 291 (370)
.-|-|..+.+|+++.+. +.|+|+.++....
T Consensus 164 ~gPp~~~~~~el~~~~~--~~~~i~~~~~~~~ 193 (218)
T PRK13255 164 AGPPFSVSDEEVEALYA--GCFEIELLERQDV 193 (218)
T ss_pred CCCCCCCCHHHHHHHhc--CCceEEEeeeccc
Confidence 12447889999999885 2388888886543
|
|
| >PF00891 Methyltransf_2: O-methyltransferase; InterPro: IPR001077 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.013 Score=54.79 Aligned_cols=105 Identities=22% Similarity=0.441 Sum_probs=71.6
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (370)
++.-+|+|+|+|+|..+..++ +++ |.++++.=|||. + ++. ... .. +
T Consensus 99 ~~~~~vvDvGGG~G~~~~~l~--------~~~-------P~l~~~v~Dlp~-----v---~~~----~~~--~~-----r 144 (241)
T PF00891_consen 99 SGFKTVVDVGGGSGHFAIALA--------RAY-------PNLRATVFDLPE-----V---IEQ----AKE--AD-----R 144 (241)
T ss_dssp TTSSEEEEET-TTSHHHHHHH--------HHS-------TTSEEEEEE-HH-----H---HCC----HHH--TT-----T
T ss_pred cCccEEEeccCcchHHHHHHH--------HHC-------CCCcceeeccHh-----h---hhc----ccc--cc-----c
Confidence 455689999999999887766 543 779999999981 1 111 111 11 2
Q ss_pred ceEEeecCCCcccccCCCCceeEEEeccccc-cccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQ-WLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~~alh-Wls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~E 207 (370)
-.| +||+|+ .=+|. .|+++-.+.|| | |+ +|-..+|+.-++-
T Consensus 145 v~~---~~gd~f-~~~P~--~D~~~l~~vLh~~----~d----------------------------~~~~~iL~~~~~a 186 (241)
T PF00891_consen 145 VEF---VPGDFF-DPLPV--ADVYLLRHVLHDW----SD----------------------------EDCVKILRNAAAA 186 (241)
T ss_dssp EEE---EES-TT-TCCSS--ESEEEEESSGGGS-----H----------------------------HHHHHHHHHHHHH
T ss_pred ccc---ccccHH-hhhcc--ccceeeehhhhhc----ch----------------------------HHHHHHHHHHHHH
Confidence 233 778999 55666 99999999997 6 32 3445589999999
Q ss_pred hccC--ceEEEEeeccCCCC
Q 017514 208 LVAE--GRMVLTFLGRKSQD 225 (370)
Q Consensus 208 L~~G--G~lvl~~~g~~~~~ 225 (370)
|+|| |++++.=.-.++..
T Consensus 187 l~pg~~g~llI~e~~~~~~~ 206 (241)
T PF00891_consen 187 LKPGKDGRLLIIEMVLPDDR 206 (241)
T ss_dssp SEECTTEEEEEEEEEECSSS
T ss_pred hCCCCCCeEEEEeeccCCCC
Confidence 9999 99999877665543
|
The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. This domain includes a range of O-methyltransferases some of which utilise S-adenosyl methionine as substrate []. In prokaryotes, the major role of DNA methylation is to protect host DNA against degradation by restriction enzymes. In eukaryotes, DNA methylation has been implicated in the control of several cellular processes, including differentiation, gene regulation, and embryonic development. O-methyltransferases have a common catalytic domain structure, which might be universal among S-adenosyl-L-methionine (AdoMet)-dependent methyltransferases []. Comparative analysis of the predicted amino acid sequences of a number of plant O-methyltransferase cDNA clones show that they share some 32-71% sequence identity, and can be grouped according to the different compounds they utilise as substrates [].; GO: 0008171 O-methyltransferase activity; PDB: 1FPQ_A 1FP1_D 3P9K_B 3P9I_D 3P9C_A 3I53_A 3I5U_A 3I64_A 3I58_A 1ZG3_A .... |
| >cd02440 AdoMet_MTases S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy) | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0031 Score=48.60 Aligned_cols=102 Identities=25% Similarity=0.247 Sum_probs=60.2
Q ss_pred EEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCceEE
Q 017514 53 AIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFF 132 (370)
Q Consensus 53 ~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~f~ 132 (370)
+|+|+|||.|.++..+.. .+..+++..|+..+-....-+ ........ ...|.
T Consensus 1 ~ildig~G~G~~~~~~~~----------------~~~~~~~~~d~~~~~~~~~~~--------~~~~~~~~----~~~~~ 52 (107)
T cd02440 1 RVLDLGCGTGALALALAS----------------GPGARVTGVDISPVALELARK--------AAAALLAD----NVEVL 52 (107)
T ss_pred CeEEEcCCccHHHHHHhc----------------CCCCEEEEEeCCHHHHHHHHH--------HHhccccc----ceEEE
Confidence 589999999998776651 123678888875211111110 00000110 22333
Q ss_pred eecCCCcccccC-CCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 017514 133 TGVPGSFYGRLF-PRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAE 211 (370)
Q Consensus 133 ~~vpgSFy~~l~-p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~G 211 (370)
.+ ++..... +.+++|+++....+++. + .+...+++.-.+-|+||
T Consensus 53 ~~---~~~~~~~~~~~~~d~i~~~~~~~~~---~-----------------------------~~~~~~l~~~~~~l~~~ 97 (107)
T cd02440 53 KG---DAEELPPEADESFDVIISDPPLHHL---V-----------------------------EDLARFLEEARRLLKPG 97 (107)
T ss_pred Ec---ChhhhccccCCceEEEEEccceeeh---h-----------------------------hHHHHHHHHHHHHcCCC
Confidence 32 4433333 67789999999998886 1 23334666667778999
Q ss_pred ceEEEE
Q 017514 212 GRMVLT 217 (370)
Q Consensus 212 G~lvl~ 217 (370)
|.+++.
T Consensus 98 g~~~~~ 103 (107)
T cd02440 98 GVLVLT 103 (107)
T ss_pred CEEEEE
Confidence 999886
|
There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.). |
| >PF05175 MTS: Methyltransferase small domain; InterPro: IPR007848 This domain is found in ribosomal RNA small subunit methyltransferase C and in other methyltransferases | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0029 Score=56.39 Aligned_cols=110 Identities=20% Similarity=0.222 Sum_probs=65.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhh-CCCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAAG 128 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~-~~~~~~~~ 128 (370)
..-+|+|+|||+|..++.+. +++ |...|+..|.- +......+... .... .
T Consensus 31 ~~~~vLDlG~G~G~i~~~la--------~~~-------~~~~v~~vDi~-----------~~a~~~a~~n~~~n~~---~ 81 (170)
T PF05175_consen 31 KGGRVLDLGCGSGVISLALA--------KRG-------PDAKVTAVDIN-----------PDALELAKRNAERNGL---E 81 (170)
T ss_dssp TTCEEEEETSTTSHHHHHHH--------HTS-------TCEEEEEEESB-----------HHHHHHHHHHHHHTTC---T
T ss_pred cCCeEEEecCChHHHHHHHH--------HhC-------CCCEEEEEcCC-----------HHHHHHHHHHHHhcCc---c
Confidence 34689999999999988776 332 55778888875 22212111111 1111 2
Q ss_pred ceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
. +..+..+.++.+. +.++|+++|+-=+|+-. .... .-+..|++.=.+-|
T Consensus 82 ~--v~~~~~d~~~~~~-~~~fD~Iv~NPP~~~~~--------------------~~~~--------~~~~~~i~~a~~~L 130 (170)
T PF05175_consen 82 N--VEVVQSDLFEALP-DGKFDLIVSNPPFHAGG--------------------DDGL--------DLLRDFIEQARRYL 130 (170)
T ss_dssp T--EEEEESSTTTTCC-TTCEEEEEE---SBTTS--------------------HCHH--------HHHHHHHHHHHHHE
T ss_pred c--ccccccccccccc-ccceeEEEEccchhccc--------------------ccch--------hhHHHHHHHHHHhc
Confidence 2 3334567777655 88999999974333311 1111 12344677778999
Q ss_pred ccCceEEEEee
Q 017514 209 VAEGRMVLTFL 219 (370)
Q Consensus 209 ~~GG~lvl~~~ 219 (370)
+|||.+++..-
T Consensus 131 k~~G~l~lv~~ 141 (170)
T PF05175_consen 131 KPGGRLFLVIN 141 (170)
T ss_dssp EEEEEEEEEEE
T ss_pred cCCCEEEEEee
Confidence 99999998664
|
; GO: 0008168 methyltransferase activity; PDB: 1WY7_A 1DUS_A 2OZV_A 2PJD_A 1VQ1_A 1NV9_A 1SG9_C 1NV8_A 3Q87_B 3DMF_A .... |
| >PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0014 Score=59.16 Aligned_cols=34 Identities=21% Similarity=0.273 Sum_probs=25.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLP 98 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp 98 (370)
...+|+|+|||+|..++.+. +++ |..+|+.-|.-
T Consensus 31 ~~~~vLDiG~G~G~~~~~la--------~~~-------~~~~v~~vD~s 64 (187)
T PRK08287 31 RAKHLIDVGAGTGSVSIEAA--------LQF-------PSLQVTAIERN 64 (187)
T ss_pred CCCEEEEECCcCCHHHHHHH--------HHC-------CCCEEEEEECC
Confidence 45689999999999888766 321 44778888874
|
|
| >PF06080 DUF938: Protein of unknown function (DUF938); InterPro: IPR010342 This family consists of several hypothetical proteins from both prokaryotes and eukaryotes | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.016 Score=53.66 Aligned_cols=180 Identities=12% Similarity=0.063 Sum_probs=108.3
Q ss_pred HHHhHHHHHHHHHhhcccCCCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHh
Q 017514 29 ISIAKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRS 108 (370)
Q Consensus 29 ~~~~~~~l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~ 108 (370)
.++-++-|.++++.+... .+. +|+++|||+|--..... +. .|.+++-=+|+..+-+.++-.-
T Consensus 7 aeRNk~pIl~vL~~~l~~--~~~-~vLEiaSGtGqHa~~FA--------~~-------lP~l~WqPSD~~~~~~~sI~a~ 68 (204)
T PF06080_consen 7 AERNKDPILEVLKQYLPD--SGT-RVLEIASGTGQHAVYFA--------QA-------LPHLTWQPSDPDDNLRPSIRAW 68 (204)
T ss_pred hhhCHhHHHHHHHHHhCc--cCc-eEEEEcCCccHHHHHHH--------HH-------CCCCEEcCCCCChHHHhhHHHH
Confidence 344444455566654332 122 79999999997766555 32 3678999999997776666554
Q ss_pred hHHHHHHHHHhhCCCCCCCCceEEee-cCCCccc--ccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHH
Q 017514 109 LASFQKILRKQLGSASGAAGQCFFTG-VPGSFYG--RLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCV 185 (370)
Q Consensus 109 l~~~~~~~~~~~~~~~~~~~~~f~~~-vpgSFy~--~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v 185 (370)
+... .+.+ . -.+..+=. -+..=.. --++..++|.++|.+.+|-.+- + .+
T Consensus 69 ~~~~--~~~N-----v--~~P~~lDv~~~~w~~~~~~~~~~~~~D~i~~~N~lHI~p~-~------------------~~ 120 (204)
T PF06080_consen 69 IAEA--GLPN-----V--RPPLALDVSAPPWPWELPAPLSPESFDAIFCINMLHISPW-S------------------AV 120 (204)
T ss_pred HHhc--CCcc-----c--CCCeEeecCCCCCccccccccCCCCcceeeehhHHHhcCH-H------------------HH
Confidence 4321 0000 0 02222211 1100001 0126789999999999998433 1 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCccc
Q 017514 186 LTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYT 265 (370)
Q Consensus 186 ~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ 265 (370)
..+++.=++-|++||.|++.-+=..++..++.. + ..+.+.|++. +.-|=.
T Consensus 121 ------------~~lf~~a~~~L~~gG~L~~YGPF~~~G~~ts~S-N---~~FD~sLr~r--------------dp~~Gi 170 (204)
T PF06080_consen 121 ------------EGLFAGAARLLKPGGLLFLYGPFNRDGKFTSES-N---AAFDASLRSR--------------DPEWGI 170 (204)
T ss_pred ------------HHHHHHHHHhCCCCCEEEEeCCcccCCEeCCcH-H---HHHHHHHhcC--------------CCCcCc
Confidence 125666689999999999988766665444433 2 2344555432 444678
Q ss_pred CCHHHHHHHHHhcCceEEEE
Q 017514 266 PSPAEIKSEVIKEGSFTIDH 285 (370)
Q Consensus 266 ~s~eE~~~~ie~~GsF~i~~ 285 (370)
|..+++.+.-+++| ++++.
T Consensus 171 RD~e~v~~lA~~~G-L~l~~ 189 (204)
T PF06080_consen 171 RDIEDVEALAAAHG-LELEE 189 (204)
T ss_pred cCHHHHHHHHHHCC-CccCc
Confidence 99999999999999 65433
|
The function of this family is unknown. |
| >PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0033 Score=57.38 Aligned_cols=101 Identities=19% Similarity=0.108 Sum_probs=60.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhh-CCCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAAG 128 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~-~~~~~~~~ 128 (370)
...+|+|+|||+|..++.+. ... |..+|+.-|.- +......++.. .... .
T Consensus 45 ~g~~VLDiGcGtG~~al~la--------~~~-------~~~~V~giD~s-----------~~~l~~A~~~~~~~~l---~ 95 (187)
T PRK00107 45 GGERVLDVGSGAGFPGIPLA--------IAR-------PELKVTLVDSL-----------GKKIAFLREVAAELGL---K 95 (187)
T ss_pred CCCeEEEEcCCCCHHHHHHH--------HHC-------CCCeEEEEeCc-----------HHHHHHHHHHHHHcCC---C
Confidence 36899999999998888666 221 34678888874 33222221111 1111 1
Q ss_pred ceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
+ +.-+.++..+ +.+++++|++++... .++..|++..++-|
T Consensus 96 ~--i~~~~~d~~~-~~~~~~fDlV~~~~~-------------------------------------~~~~~~l~~~~~~L 135 (187)
T PRK00107 96 N--VTVVHGRAEE-FGQEEKFDVVTSRAV-------------------------------------ASLSDLVELCLPLL 135 (187)
T ss_pred C--EEEEeccHhh-CCCCCCccEEEEccc-------------------------------------cCHHHHHHHHHHhc
Confidence 2 2223334422 334678999998520 12334788889999
Q ss_pred ccCceEEEEee
Q 017514 209 VAEGRMVLTFL 219 (370)
Q Consensus 209 ~~GG~lvl~~~ 219 (370)
+|||++++...
T Consensus 136 kpGG~lv~~~~ 146 (187)
T PRK00107 136 KPGGRFLALKG 146 (187)
T ss_pred CCCeEEEEEeC
Confidence 99999998853
|
|
| >TIGR03533 L3_gln_methyl protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0064 Score=58.95 Aligned_cols=122 Identities=20% Similarity=0.190 Sum_probs=66.2
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~~ 127 (370)
..+|+|+|||+|..++.+. +++ |..+|+..|.- +.......+ ..+.. .
T Consensus 122 ~~~vLDlG~GsG~i~~~la--------~~~-------~~~~v~avDis-----------~~al~~A~~n~~~~~~~---~ 172 (284)
T TIGR03533 122 VKRILDLCTGSGCIAIACA--------YAF-------PEAEVDAVDIS-----------PDALAVAEINIERHGLE---D 172 (284)
T ss_pred CCEEEEEeCchhHHHHHHH--------HHC-------CCCEEEEEECC-----------HHHHHHHHHHHHHcCCC---C
Confidence 4689999999999888766 321 44788888874 222111111 11210 0
Q ss_pred CceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHH----HHHH--HHHHHHHHHHH
Q 017514 128 GQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVL----TAYY--EQFQRDFSLFL 201 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~----~ay~--~Q~~~D~~~fL 201 (370)
+-.|.. +++++.+ |++++|+++|+ |+.+..+. + . ..++++. .|.. ..--.....|+
T Consensus 173 ~i~~~~---~D~~~~~-~~~~fD~Iv~N---------PPy~~~~~--~--~-~l~~~~~~ep~~al~gg~dGl~~~~~il 234 (284)
T TIGR03533 173 RVTLIQ---SDLFAAL-PGRKYDLIVSN---------PPYVDAED--M--A-DLPAEYHHEPELALASGEDGLDLVRRIL 234 (284)
T ss_pred cEEEEE---Cchhhcc-CCCCccEEEEC---------CCCCCccc--h--h-hCCHhhhcCHHHHhcCCCcHHHHHHHHH
Confidence 113333 4665543 66789999987 44332110 0 0 0011110 0000 00112345688
Q ss_pred HHHHHhhccCceEEEEee
Q 017514 202 KCRSEELVAEGRMVLTFL 219 (370)
Q Consensus 202 ~~Ra~EL~~GG~lvl~~~ 219 (370)
+.-.+-|+|||++++.+.
T Consensus 235 ~~a~~~L~~gG~l~~e~g 252 (284)
T TIGR03533 235 AEAADHLNENGVLVVEVG 252 (284)
T ss_pred HHHHHhcCCCCEEEEEEC
Confidence 888889999999998764
|
Members of this protein family methylate ribosomal protein L3 on a glutamine side chain. This family is related to HemK, a protein-glutamine methyltranferase for peptide chain release factors. |
| >PLN02232 ubiquinone biosynthesis methyltransferase | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.002 Score=57.03 Aligned_cols=110 Identities=11% Similarity=0.132 Sum_probs=63.3
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
-|+.| +...=-++++++|++++.+++||+.+ ...+|+.-.+-|+
T Consensus 29 ~~~~~---d~~~lp~~~~~fD~v~~~~~l~~~~d---------------------------------~~~~l~ei~rvLk 72 (160)
T PLN02232 29 EWIEG---DAIDLPFDDCEFDAVTMGYGLRNVVD---------------------------------RLRAMKEMYRVLK 72 (160)
T ss_pred EEEEe---chhhCCCCCCCeeEEEecchhhcCCC---------------------------------HHHHHHHHHHHcC
Confidence 35444 55322357889999999999999643 1226777788999
Q ss_pred cCceEEEEeeccCCCCCCCchhhhHHHHH-HHHHHHHHhcCCcchhhhccCCcC----cccCCHHHHHHHHHhcCceEEE
Q 017514 210 AEGRMVLTFLGRKSQDPSSKECCYIWELL-ATALNNMVSEGLIEEEKVNCFNIP----QYTPSPAEIKSEVIKEGSFTID 284 (370)
Q Consensus 210 ~GG~lvl~~~g~~~~~~~~~~~~~~~~~l-~~al~~mv~eG~i~~e~~d~f~~P----~y~~s~eE~~~~ie~~GsF~i~ 284 (370)
|||++++.-++.++.... ...+... ... +..-|.+... ...+..- ..+++++|+.+.+++.| |+-.
T Consensus 73 pGG~l~i~d~~~~~~~~~----~~~~~~~~~~~---~~~~~~~~~~-~~~y~yl~~si~~f~~~~el~~ll~~aG-F~~~ 143 (160)
T PLN02232 73 PGSRVSILDFNKSNQSVT----TFMQGWMIDNV---VVPVATVYDL-AKEYEYLKYSINGYLTGEELETLALEAG-FSSA 143 (160)
T ss_pred cCeEEEEEECCCCChHHH----HHHHHHHccch---HhhhhHHhCC-hHHHHhHHHHHHHCcCHHHHHHHHHHcC-CCcc
Confidence 999999987775443110 0111100 000 0000111111 1122111 24689999999999999 8643
|
|
| >COG4123 Predicted O-methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0036 Score=59.56 Aligned_cols=61 Identities=11% Similarity=0.143 Sum_probs=45.5
Q ss_pred CCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEee
Q 017514 144 FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFL 219 (370)
Q Consensus 144 ~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~ 219 (370)
.+..++|+++|+ |+.-..++. ..+.+.++-.+.+..-++..+++.=++=|+|||.+.++..
T Consensus 111 ~~~~~fD~Ii~N---------PPyf~~~~~------~~~~~~~~~Ar~e~~~~le~~i~~a~~~lk~~G~l~~V~r 171 (248)
T COG4123 111 LVFASFDLIICN---------PPYFKQGSR------LNENPLRAIARHEITLDLEDLIRAAAKLLKPGGRLAFVHR 171 (248)
T ss_pred ccccccCEEEeC---------CCCCCCccc------cCcChhhhhhhhhhcCCHHHHHHHHHHHccCCCEEEEEec
Confidence 344478999986 765544322 1244566777778888999999999999999999999874
|
|
| >PRK14121 tRNA (guanine-N(7)-)-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0035 Score=63.38 Aligned_cols=109 Identities=19% Similarity=0.195 Sum_probs=67.4
Q ss_pred eEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhh-CCCCCCCCce
Q 017514 52 VAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAAGQC 130 (370)
Q Consensus 52 ~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~-~~~~~~~~~~ 130 (370)
-.++|+|||+|..++.+. ++ .|+..++--|+- +..-....+.. ..+. .++
T Consensus 124 p~vLEIGcGsG~~ll~lA--------~~-------~P~~~~iGIEI~-----------~~~i~~a~~ka~~~gL---~NV 174 (390)
T PRK14121 124 KILIEIGFGSGRHLLYQA--------KN-------NPNKLFIGIEIH-----------TPSIEQVLKQIELLNL---KNL 174 (390)
T ss_pred CeEEEEcCcccHHHHHHH--------Hh-------CCCCCEEEEECC-----------HHHHHHHHHHHHHcCC---CcE
Confidence 489999999998887665 32 266888888874 22111111111 1111 343
Q ss_pred EEeecCCCc--ccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 131 FFTGVPGSF--YGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 131 f~~~vpgSF--y~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
.+. .++. .-..+|++|+|.++.++...|..+ +. .++ -...||+.-++-|
T Consensus 175 ~~i--~~DA~~ll~~~~~~s~D~I~lnFPdPW~Kk-rH------RRl--------------------v~~~fL~e~~RvL 225 (390)
T PRK14121 175 LII--NYDARLLLELLPSNSVEKIFVHFPVPWDKK-PH------RRV--------------------ISEDFLNEALRVL 225 (390)
T ss_pred EEE--ECCHHHhhhhCCCCceeEEEEeCCCCcccc-ch------hhc--------------------cHHHHHHHHHHHc
Confidence 322 2333 124689999999999888888222 10 011 1234888889999
Q ss_pred ccCceEEEEe
Q 017514 209 VAEGRMVLTF 218 (370)
Q Consensus 209 ~~GG~lvl~~ 218 (370)
+|||.+.+..
T Consensus 226 kpGG~l~l~T 235 (390)
T PRK14121 226 KPGGTLELRT 235 (390)
T ss_pred CCCcEEEEEE
Confidence 9999998876
|
|
| >TIGR03534 RF_mod_PrmC protein-(glutamine-N5) methyltransferase, release factor-specific | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0054 Score=57.24 Aligned_cols=125 Identities=20% Similarity=0.241 Sum_probs=67.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~ 126 (370)
...+|+|+|||+|..++.+. +.+ |..+++..|.- +........ ..+.+
T Consensus 87 ~~~~ilDig~G~G~~~~~l~--------~~~-------~~~~v~~iD~~-----------~~~~~~a~~~~~~~~~~--- 137 (251)
T TIGR03534 87 GPLRVLDLGTGSGAIALALA--------KER-------PDARVTAVDIS-----------PEALAVARKNAARLGLD--- 137 (251)
T ss_pred CCCeEEEEeCcHhHHHHHHH--------HHC-------CCCEEEEEECC-----------HHHHHHHHHHHHHcCCC---
Confidence 34689999999998887665 221 34678888864 222111111 11211
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccCC---CCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQV---PDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKC 203 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~---P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~ 203 (370)
+--+ +.+++.. .+|++++|+++++--.+..+.. +..+... .|..... -......++..|++.
T Consensus 138 -~~~~---~~~d~~~-~~~~~~fD~Vi~npPy~~~~~~~~~~~~~~~~---------e~~~~~~-~~~~~~~~~~~~i~~ 202 (251)
T TIGR03534 138 -NVTF---LQSDWFE-PLPGGKFDLIVSNPPYIPEADIHLLDPEVRFH---------EPRLALF-GGEDGLDFYRRIIAQ 202 (251)
T ss_pred -eEEE---EECchhc-cCcCCceeEEEECCCCCchhhhhhcChhhhhc---------CCHHHHc-CCCcHHHHHHHHHHH
Confidence 1123 3346655 4578899999996443332221 1110000 0000000 001123456778888
Q ss_pred HHHhhccCceEEEEe
Q 017514 204 RSEELVAEGRMVLTF 218 (370)
Q Consensus 204 Ra~EL~~GG~lvl~~ 218 (370)
=.+-|+|||.+++..
T Consensus 203 ~~~~L~~gG~~~~~~ 217 (251)
T TIGR03534 203 APRLLKPGGWLLLEI 217 (251)
T ss_pred HHHhcccCCEEEEEE
Confidence 899999999999854
|
Members of this protein family are HemK (PrmC), a protein once thought to be involved in heme biosynthesis but now recognized to be a protein-glutamine methyltransferase that modifies the peptide chain release factors. All members of the seed alignment are encoded next to the release factor 1 gene (prfA) and confirmed by phylogenetic analysis. SIMBAL analysis (manuscript in prep.) shows the motif [LIV]PRx[DE]TE (in Escherichia coli, IPRPDTE) confers specificity for the release factors rather than for ribosomal protein L3. |
| >TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.008 Score=55.51 Aligned_cols=77 Identities=13% Similarity=0.088 Sum_probs=43.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHH---HhhCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILR---KQLGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~---~~~~~~~~~ 126 (370)
..-+|+|+|||+|.+|..+. +.+ .++.+|+-.|.- +......+ ++.+.+
T Consensus 77 ~~~~VLDiG~GsG~~a~~la--------~~~------~~~g~V~~vD~~-----------~~~~~~A~~~~~~~g~~--- 128 (215)
T TIGR00080 77 PGMKVLEIGTGSGYQAAVLA--------EIV------GRDGLVVSIERI-----------PELAEKAERRLRKLGLD--- 128 (215)
T ss_pred CcCEEEEECCCccHHHHHHH--------HHh------CCCCEEEEEeCC-----------HHHHHHHHHHHHHCCCC---
Confidence 34699999999999998655 321 123567777763 22221111 111211
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEecccc
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSL 158 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~al 158 (370)
+-.|+.+ +...-+.+.+++|++++..+.
T Consensus 129 -~v~~~~~---d~~~~~~~~~~fD~Ii~~~~~ 156 (215)
T TIGR00080 129 -NVIVIVG---DGTQGWEPLAPYDRIYVTAAG 156 (215)
T ss_pred -CeEEEEC---CcccCCcccCCCCEEEEcCCc
Confidence 2234433 654444455689998876553
|
Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt. |
| >PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0052 Score=56.49 Aligned_cols=80 Identities=11% Similarity=0.081 Sum_probs=44.5
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhh-CCCCCCCCc
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAAGQ 129 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~-~~~~~~~~~ 129 (370)
..+|+|+|||+|..|..+. +.. + +.-+|+--|.- +.....-.+.. ..++ ..+
T Consensus 73 ~~~VLDiG~GsG~~~~~la--------~~~---~---~~g~V~~iD~~-----------~~~~~~a~~~l~~~~~--~~~ 125 (205)
T PRK13944 73 GMKILEVGTGSGYQAAVCA--------EAI---E---RRGKVYTVEIV-----------KELAIYAAQNIERLGY--WGV 125 (205)
T ss_pred CCEEEEECcCccHHHHHHH--------Hhc---C---CCCEEEEEeCC-----------HHHHHHHHHHHHHcCC--CCc
Confidence 4689999999999987665 221 1 12467777764 22221111111 0111 011
Q ss_pred -eEEeecCCCcccccCCCCceeEEEecccccc
Q 017514 130 -CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQW 160 (370)
Q Consensus 130 -~f~~~vpgSFy~~l~p~~sv~~~~S~~alhW 160 (370)
.+.. +++.+-+.+..++|.+++..++++
T Consensus 126 v~~~~---~d~~~~~~~~~~fD~Ii~~~~~~~ 154 (205)
T PRK13944 126 VEVYH---GDGKRGLEKHAPFDAIIVTAAAST 154 (205)
T ss_pred EEEEE---CCcccCCccCCCccEEEEccCcch
Confidence 2333 365444445578999999988765
|
|
| >PRK04266 fibrillarin; Provisional | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.028 Score=52.83 Aligned_cols=22 Identities=18% Similarity=0.158 Sum_probs=17.6
Q ss_pred HHHHHHHhhccCceEEEEeecc
Q 017514 200 FLKCRSEELVAEGRMVLTFLGR 221 (370)
Q Consensus 200 fL~~Ra~EL~~GG~lvl~~~g~ 221 (370)
+|+.-.+-|+|||++++++..+
T Consensus 158 ~L~~~~r~LKpGG~lvI~v~~~ 179 (226)
T PRK04266 158 AIDNAEFFLKDGGYLLLAIKAR 179 (226)
T ss_pred HHHHHHHhcCCCcEEEEEEecc
Confidence 4556677899999999987764
|
|
| >PRK14967 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.019 Score=53.39 Aligned_cols=165 Identities=15% Similarity=0.086 Sum_probs=82.0
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhh-CCCCCCCCc
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAAGQ 129 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~-~~~~~~~~~ 129 (370)
.-+|+|+|||+|..++.+. +. +.-+++..|+. +.......... ..+. ..
T Consensus 37 ~~~vLDlGcG~G~~~~~la--------~~--------~~~~v~~vD~s-----------~~~l~~a~~n~~~~~~---~~ 86 (223)
T PRK14967 37 GRRVLDLCTGSGALAVAAA--------AA--------GAGSVTAVDIS-----------RRAVRSARLNALLAGV---DV 86 (223)
T ss_pred CCeEEEecCCHHHHHHHHH--------Hc--------CCCeEEEEECC-----------HHHHHHHHHHHHHhCC---ee
Confidence 3699999999999877554 11 11366777764 21111111100 0011 11
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHH--HHHHHHHHHHHHHHHh
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYE--QFQRDFSLFLKCRSEE 207 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~--Q~~~D~~~fL~~Ra~E 207 (370)
.+ +-+++.. .++++++|+++++--.+.-+... ..+ ++ ...+|.. --..++..|++.=.+-
T Consensus 87 ~~---~~~d~~~-~~~~~~fD~Vi~npPy~~~~~~~--~~~-~~-----------~~~~~~~~~~~~~~~~~~l~~a~~~ 148 (223)
T PRK14967 87 DV---RRGDWAR-AVEFRPFDVVVSNPPYVPAPPDA--PPS-RG-----------PARAWDAGPDGRAVLDRLCDAAPAL 148 (223)
T ss_pred EE---EECchhh-hccCCCeeEEEECCCCCCCCccc--ccc-cC-----------hhHhhhCCCcHHHHHHHHHHHHHHh
Confidence 22 2347755 45788999999874322211110 000 00 0011110 0123466788877889
Q ss_pred hccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcC
Q 017514 208 LVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEG 279 (370)
Q Consensus 208 L~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~G 279 (370)
|+|||++++......+ +.+++..+...|+ .-+.+.+..+|+ .+..-.....+++.|
T Consensus 149 Lk~gG~l~~~~~~~~~--------------~~~~~~~l~~~g~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 204 (223)
T PRK14967 149 LAPGGSLLLVQSELSG--------------VERTLTRLSEAGL-DAEVVASQWIPF-GPVLRARAAWLERRG 204 (223)
T ss_pred cCCCcEEEEEEecccC--------------HHHHHHHHHHCCC-CeEEEEeeccCc-cHHHHHHHHHHHHcC
Confidence 9999999977654321 1233333333342 344445555663 332223445567777
|
|
| >PF03141 Methyltransf_29: Putative S-adenosyl-L-methionine-dependent methyltransferase; InterPro: IPR004159 Members of this family of hypothetical plant proteins are putative methyltransferases | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0038 Score=64.40 Aligned_cols=49 Identities=29% Similarity=0.319 Sum_probs=34.8
Q ss_pred cccC-CCCceeEEEeccccc-cccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEe
Q 017514 141 GRLF-PRNSVHLFHSSYSLQ-WLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTF 218 (370)
Q Consensus 141 ~~l~-p~~sv~~~~S~~alh-Wls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~ 218 (370)
+||. |++++|++||+-|+. |.+.- | ++ |----+-|+|||.++++-
T Consensus 173 ~rLPfp~~~fDmvHcsrc~i~W~~~~--------g-~~------------------------l~evdRvLRpGGyfv~S~ 219 (506)
T PF03141_consen 173 QRLPFPSNAFDMVHCSRCLIPWHPND--------G-FL------------------------LFEVDRVLRPGGYFVLSG 219 (506)
T ss_pred ccccCCccchhhhhcccccccchhcc--------c-ce------------------------eehhhhhhccCceEEecC
Confidence 3665 999999999999985 74442 1 11 222267799999999987
Q ss_pred eccC
Q 017514 219 LGRK 222 (370)
Q Consensus 219 ~g~~ 222 (370)
+-..
T Consensus 220 ppv~ 223 (506)
T PF03141_consen 220 PPVY 223 (506)
T ss_pred Cccc
Confidence 7544
|
; GO: 0008168 methyltransferase activity |
| >PRK11805 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.02 Score=56.12 Aligned_cols=71 Identities=20% Similarity=0.241 Sum_probs=42.3
Q ss_pred eEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCCCC
Q 017514 52 VAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGAAG 128 (370)
Q Consensus 52 ~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~~~ 128 (370)
.+|+|+|||+|..++.+. +.+ |..+|+..|+- +.......+ ..+... +
T Consensus 135 ~~VLDlG~GsG~iai~la--------~~~-------p~~~V~avDis-----------~~al~~A~~n~~~~~l~~---~ 185 (307)
T PRK11805 135 TRILDLCTGSGCIAIACA--------YAF-------PDAEVDAVDIS-----------PDALAVAEINIERHGLED---R 185 (307)
T ss_pred CEEEEEechhhHHHHHHH--------HHC-------CCCEEEEEeCC-----------HHHHHHHHHHHHHhCCCC---c
Confidence 689999999999887665 221 45788888884 222111111 112110 1
Q ss_pred ceEEeecCCCcccccCCCCceeEEEec
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSS 155 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~ 155 (370)
-.|+. +++.+.+ |++++|+++|+
T Consensus 186 i~~~~---~D~~~~l-~~~~fDlIvsN 208 (307)
T PRK11805 186 VTLIE---SDLFAAL-PGRRYDLIVSN 208 (307)
T ss_pred EEEEE---CchhhhC-CCCCccEEEEC
Confidence 23433 4665543 66789999996
|
|
| >KOG3178 consensus Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.036 Score=54.95 Aligned_cols=186 Identities=17% Similarity=0.263 Sum_probs=114.1
Q ss_pred ccCCCCCchhHhhhHHHHHHHHHhHHHHHHHHHhhcccCCCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCC
Q 017514 9 MNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLP 88 (370)
Q Consensus 9 M~gg~G~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p 88 (370)
|-||-|..+|.-+-.+|+.+-.. ..++.+.+...+.. ....-..+|.|-|.|+.+-.++ ..+ |
T Consensus 138 ~l~~~~~~~~~~~~~~~~sm~~l-~~~~~~~il~~~~G-f~~v~~avDvGgGiG~v~k~ll--------~~f-------p 200 (342)
T KOG3178|consen 138 MLGGYGGADERFSKDFNGSMSFL-STLVMKKILEVYTG-FKGVNVAVDVGGGIGRVLKNLL--------SKY-------P 200 (342)
T ss_pred hhhhhcccccccHHHHHHHHHHH-HHHHHHhhhhhhcc-cccCceEEEcCCcHhHHHHHHH--------HhC-------C
Confidence 56777766666556666554333 33333333333322 4567889999999999877666 333 5
Q ss_pred cceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCceE---EeecCCCcccccCCCCceeEEEeccccc-cccCC
Q 017514 89 EFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCF---FTGVPGSFYGRLFPRNSVHLFHSSYSLQ-WLSQV 164 (370)
Q Consensus 89 ~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~f---~~~vpgSFy~~l~p~~sv~~~~S~~alh-Wls~~ 164 (370)
.+..+==||| . -... .+++ +-=|.|.+++. .|+.- ++|--|+|| |
T Consensus 201 ~ik~infdlp------------~---v~~~---------a~~~~~gV~~v~gdmfq~-~P~~d--aI~mkWiLhdw---- 249 (342)
T KOG3178|consen 201 HIKGINFDLP------------F---VLAA---------APYLAPGVEHVAGDMFQD-TPKGD--AIWMKWILHDW---- 249 (342)
T ss_pred CCceeecCHH------------H---HHhh---------hhhhcCCcceeccccccc-CCCcC--eEEEEeecccC----
Confidence 6777666776 1 0100 1111 22266788988 77776 888888887 5
Q ss_pred CCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeccCCCCCCC---chhhhHHHHHHHH
Q 017514 165 PDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSS---KECCYIWELLATA 241 (370)
Q Consensus 165 P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~~~~~~~---~~~~~~~~~l~~a 241 (370)
++ +|...||+...+-|.|||.+++.=.-.+.+...+ ....-..+++..+
T Consensus 250 tD----------------------------edcvkiLknC~~sL~~~GkIiv~E~V~p~e~~~dd~~s~v~~~~d~lm~~ 301 (342)
T KOG3178|consen 250 TD----------------------------EDCVKILKNCKKSLPPGGKIIVVENVTPEEDKFDDIDSSVTRDMDLLMLT 301 (342)
T ss_pred Ch----------------------------HHHHHHHHHHHHhCCCCCEEEEEeccCCCCCCccccccceeehhHHHHHH
Confidence 32 6888999999999999999998755333321111 1111123333333
Q ss_pred HHHHHhc-CCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEEE
Q 017514 242 LNNMVSE-GLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 289 (370)
Q Consensus 242 l~~mv~e-G~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~ 289 (370)
. .+ | -.|+.+|++..+.++| |.+-..-..
T Consensus 302 ~----~~~G--------------kert~~e~q~l~~~~g-F~~~~~~~~ 331 (342)
T KOG3178|consen 302 Q----TSGG--------------KERTLKEFQALLPEEG-FPVCMVALT 331 (342)
T ss_pred H----hccc--------------eeccHHHHHhcchhhc-CceeEEEec
Confidence 2 22 3 3578999999999999 876544443
|
|
| >PF07021 MetW: Methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.011 Score=54.05 Aligned_cols=103 Identities=19% Similarity=0.231 Sum_probs=69.7
Q ss_pred CCccccc--CCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceE
Q 017514 137 GSFYGRL--FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRM 214 (370)
Q Consensus 137 gSFy~~l--~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~l 214 (370)
++--+-| ||++|+|.++-+-+|+=+.+ |..+. .+-|+.|...
T Consensus 62 ~Dld~gL~~f~d~sFD~VIlsqtLQ~~~~-P~~vL-----------------------------------~EmlRVgr~~ 105 (193)
T PF07021_consen 62 GDLDEGLADFPDQSFDYVILSQTLQAVRR-PDEVL-----------------------------------EEMLRVGRRA 105 (193)
T ss_pred CCHHHhHhhCCCCCccEEehHhHHHhHhH-HHHHH-----------------------------------HHHHHhcCeE
Confidence 3444444 79999999999999998766 64322 3457889999
Q ss_pred EEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcc------cCCHHHHHHHHHhcCceEEEEEEE
Q 017514 215 VLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQY------TPSPAEIKSEVIKEGSFTIDHLEV 288 (370)
Q Consensus 215 vl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y------~~s~eE~~~~ie~~GsF~i~~le~ 288 (370)
+++|+.- ..|..- ..+.-.|..+..+. +..+|| +-|..++++..++.| ++|++-..
T Consensus 106 IVsFPNF-----------g~W~~R----~~l~~~GrmPvt~~--lPy~WYdTPNih~~Ti~DFe~lc~~~~-i~I~~~~~ 167 (193)
T PF07021_consen 106 IVSFPNF-----------GHWRNR----LQLLLRGRMPVTKA--LPYEWYDTPNIHLCTIKDFEDLCRELG-IRIEERVF 167 (193)
T ss_pred EEEecCh-----------HHHHHH----HHHHhcCCCCCCCC--CCCcccCCCCcccccHHHHHHHHHHCC-CEEEEEEE
Confidence 9999631 134322 23334477776633 334444 569999999999998 88888777
Q ss_pred Eeecc
Q 017514 289 SEVNW 293 (370)
Q Consensus 289 ~~~~w 293 (370)
+...|
T Consensus 168 ~~~~~ 172 (193)
T PF07021_consen 168 LDGGR 172 (193)
T ss_pred EcCCC
Confidence 75443
|
Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, Gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In P. putida, as in Gram-positive bacteria and certain fungi, the second and third steps are a direct sulphydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells []. |
| >PTZ00146 fibrillarin; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.04 Score=53.77 Aligned_cols=45 Identities=18% Similarity=0.231 Sum_probs=26.6
Q ss_pred hHhhhHHHHHHHHHhHHHHHHHHHhhcccCCCCceEEEeecCCCCcchHHHH
Q 017514 18 YASNSLVQEKVISIAKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVA 69 (370)
Q Consensus 18 Y~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~ 69 (370)
|..=++.+.+....+ ..-+..+.. .+ -.+|+|+|||+|..|..+.
T Consensus 107 yR~w~p~rSKlaa~i----~~g~~~l~I--kp-G~~VLDLGaG~G~~t~~lA 151 (293)
T PTZ00146 107 YRVWNPFRSKLAAAI----IGGVANIPI--KP-GSKVLYLGAASGTTVSHVS 151 (293)
T ss_pred eeeeCCcccHHHHHH----HCCcceecc--CC-CCEEEEeCCcCCHHHHHHH
Confidence 665566665554332 112222221 22 3689999999999887665
|
|
| >PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.024 Score=52.49 Aligned_cols=20 Identities=25% Similarity=0.464 Sum_probs=16.8
Q ss_pred CceEEEeecCCCCcchHHHH
Q 017514 50 TKVAIADLGCSSGPNTLLVA 69 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~ 69 (370)
...+|+|+|||+|..|..+.
T Consensus 76 ~g~~VLdIG~GsG~~t~~la 95 (212)
T PRK13942 76 EGMKVLEIGTGSGYHAAVVA 95 (212)
T ss_pred CcCEEEEECCcccHHHHHHH
Confidence 34799999999999987665
|
|
| >PRK01544 bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.017 Score=60.49 Aligned_cols=125 Identities=13% Similarity=0.168 Sum_probs=65.4
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~~ 127 (370)
..+|+|+|||+|..++.+. ... |..+|+.-|+. +........ ..+.. .
T Consensus 139 ~~~VLDlG~GsG~iai~la--------~~~-------p~~~v~avDis-----------~~al~~A~~N~~~~~l~---~ 189 (506)
T PRK01544 139 FLNILELGTGSGCIAISLL--------CEL-------PNANVIATDIS-----------LDAIEVAKSNAIKYEVT---D 189 (506)
T ss_pred CCEEEEccCchhHHHHHHH--------HHC-------CCCeEEEEECC-----------HHHHHHHHHHHHHcCCc---c
Confidence 4689999999999888665 221 45788999984 222111111 11210 0
Q ss_pred CceEEeecCCCcccccCCCCceeEEEeccccccccCCCC---CccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017514 128 GQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPD---GLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCR 204 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~---~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~R 204 (370)
+-.+ +-+++++. ++++++|+++|+--....+..+. .+.+..-.+ +--+.+...+ .+..+++.-
T Consensus 190 ~v~~---~~~D~~~~-~~~~~fDlIvsNPPYi~~~~~~~l~~~v~~~EP~~--AL~gg~dGl~--------~~~~il~~a 255 (506)
T PRK01544 190 RIQI---IHSNWFEN-IEKQKFDFIVSNPPYISHSEKSEMAIETINYEPSI--ALFAEEDGLQ--------AYFIIAENA 255 (506)
T ss_pred ceee---eecchhhh-CcCCCccEEEECCCCCCchhhhhcCchhhccCcHH--HhcCCccHHH--------HHHHHHHHH
Confidence 1123 33476554 36678999999743332222111 000000000 0000111122 344588877
Q ss_pred HHhhccCceEEEEe
Q 017514 205 SEELVAEGRMVLTF 218 (370)
Q Consensus 205 a~EL~~GG~lvl~~ 218 (370)
.+-|+|||.+++.+
T Consensus 256 ~~~L~~gG~l~lEi 269 (506)
T PRK01544 256 KQFLKPNGKIILEI 269 (506)
T ss_pred HHhccCCCEEEEEE
Confidence 88999999999864
|
|
| >PHA03411 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.018 Score=55.71 Aligned_cols=115 Identities=13% Similarity=0.168 Sum_probs=68.0
Q ss_pred eEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCceE
Q 017514 52 VAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCF 131 (370)
Q Consensus 52 ~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~f 131 (370)
-+|+|+|||+|..++.+. ++. +..+|+..|+- +......++... +..+
T Consensus 66 grVLDLGcGsGilsl~la--------~r~-------~~~~V~gVDis-----------p~al~~Ar~n~~------~v~~ 113 (279)
T PHA03411 66 GKVLDLCAGIGRLSFCML--------HRC-------KPEKIVCVELN-----------PEFARIGKRLLP------EAEW 113 (279)
T ss_pred CeEEEcCCCCCHHHHHHH--------HhC-------CCCEEEEEECC-----------HHHHHHHHHhCc------CCEE
Confidence 589999999998776554 221 23678888875 222221111111 1233
Q ss_pred EeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHH----HHH--HHHHHHHHHH
Q 017514 132 FTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQ----FQR--DFSLFLKCRS 205 (370)
Q Consensus 132 ~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q----~~~--D~~~fL~~Ra 205 (370)
.. +++.+ +.++.++|+++|+-.++++.. .+. .+.|+.+ -.+ .+..||+..+
T Consensus 114 v~---~D~~e-~~~~~kFDlIIsNPPF~~l~~-~d~------------------~~~~~~~GG~~g~~~l~~~~~l~~v~ 170 (279)
T PHA03411 114 IT---SDVFE-FESNEKFDVVISNPPFGKINT-TDT------------------KDVFEYTGGEFEFKVMTLGQKFADVG 170 (279)
T ss_pred EE---Cchhh-hcccCCCcEEEEcCCccccCc-hhh------------------hhhhhhccCccccccccHHHHHhhhH
Confidence 33 36643 345678999999999998543 110 0111111 001 1567999999
Q ss_pred HhhccCceEEEEeecc
Q 017514 206 EELVAEGRMVLTFLGR 221 (370)
Q Consensus 206 ~EL~~GG~lvl~~~g~ 221 (370)
.=|+|+|...+...|+
T Consensus 171 ~~L~p~G~~~~~yss~ 186 (279)
T PHA03411 171 YFIVPTGSAGFAYSGR 186 (279)
T ss_pred heecCCceEEEEEecc
Confidence 9999999877775443
|
|
| >PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.035 Score=50.93 Aligned_cols=20 Identities=20% Similarity=0.355 Sum_probs=16.3
Q ss_pred CceEEEeecCCCCcchHHHH
Q 017514 50 TKVAIADLGCSSGPNTLLVA 69 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~ 69 (370)
...+|+|+|||+|..|..+.
T Consensus 78 ~~~~VLeiG~GsG~~t~~la 97 (212)
T PRK00312 78 PGDRVLEIGTGSGYQAAVLA 97 (212)
T ss_pred CCCEEEEECCCccHHHHHHH
Confidence 45799999999999887433
|
|
| >COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.043 Score=49.98 Aligned_cols=36 Identities=28% Similarity=0.363 Sum_probs=23.7
Q ss_pred HHHHHHHHhhcccC--CCCceEEEeecCCCCcchHHHH
Q 017514 34 PITEEAMTKLFCST--SPTKVAIADLGCSSGPNTLLVA 69 (370)
Q Consensus 34 ~~l~~ai~~~~~~~--~~~~~~IaD~Gcs~G~Ns~~~~ 69 (370)
|+-.+.|+.+..+. ..+--++.|+|||+|.-|+..+
T Consensus 16 p~TK~EIRal~ls~L~~~~g~~l~DIGaGtGsi~iE~a 53 (187)
T COG2242 16 PMTKEEIRALTLSKLRPRPGDRLWDIGAGTGSITIEWA 53 (187)
T ss_pred CCcHHHHHHHHHHhhCCCCCCEEEEeCCCccHHHHHHH
Confidence 44555566543322 2234599999999999988655
|
|
| >COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.0076 Score=56.87 Aligned_cols=151 Identities=19% Similarity=0.210 Sum_probs=86.2
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~~ 127 (370)
-.+|+|+|||-|-.|..+. + .| ..|+-.|+- +...+--+. +.+-.
T Consensus 60 g~~vLDvGCGgG~Lse~mA--------r----~G-----a~VtgiD~s-----------e~~I~~Ak~ha~e~gv~---- 107 (243)
T COG2227 60 GLRVLDVGCGGGILSEPLA--------R----LG-----ASVTGIDAS-----------EKPIEVAKLHALESGVN---- 107 (243)
T ss_pred CCeEEEecCCccHhhHHHH--------H----CC-----CeeEEecCC-----------hHHHHHHHHhhhhcccc----
Confidence 4899999999996666544 2 23 889999985 333221111 11111
Q ss_pred CceEEeecCCCcccccC-CCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 128 GQCFFTGVPGSFYGRLF-PRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~-p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
--|..+ .- +.|. ..+++|+|.|.--|+- +|.. + .|+++-++
T Consensus 108 -i~y~~~---~~-edl~~~~~~FDvV~cmEVlEH---v~dp----------------~--------------~~~~~c~~ 149 (243)
T COG2227 108 -IDYRQA---TV-EDLASAGGQFDVVTCMEVLEH---VPDP----------------E--------------SFLRACAK 149 (243)
T ss_pred -ccchhh---hH-HHHHhcCCCccEEEEhhHHHc---cCCH----------------H--------------HHHHHHHH
Confidence 002111 11 3444 4478999987655554 6641 1 28999999
Q ss_pred hhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEE
Q 017514 207 ELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHL 286 (370)
Q Consensus 207 EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~l 286 (370)
=++|||.|+++..-|.-. +. ....-..+-+++ ++-.|.-+-++ +..++|+...+...+ |++...
T Consensus 150 lvkP~G~lf~STinrt~k---a~--~~~i~~ae~vl~-~vP~gTH~~~k---------~irp~El~~~~~~~~-~~~~~~ 213 (243)
T COG2227 150 LVKPGGILFLSTINRTLK---AY--LLAIIGAEYVLR-IVPKGTHDYRK---------FIKPAELIRWLLGAN-LKIIDR 213 (243)
T ss_pred HcCCCcEEEEeccccCHH---HH--HHHHHHHHHHHH-hcCCcchhHHH---------hcCHHHHHHhcccCC-ceEEee
Confidence 999999999998865421 10 001122333443 54444222221 345788888888766 555444
Q ss_pred E
Q 017514 287 E 287 (370)
Q Consensus 287 e 287 (370)
.
T Consensus 214 ~ 214 (243)
T COG2227 214 K 214 (243)
T ss_pred c
Confidence 4
|
|
| >PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.024 Score=46.35 Aligned_cols=110 Identities=20% Similarity=0.208 Sum_probs=62.9
Q ss_pred eEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHh---hCCCCCCCC
Q 017514 52 VAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQ---LGSASGAAG 128 (370)
Q Consensus 52 ~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~---~~~~~~~~~ 128 (370)
.+|+|.|||+|..++.+. +. + ..+++..|+- |......... .+.. .+
T Consensus 2 ~~vlD~~~G~G~~~~~~~--------~~----~----~~~~~gvdi~-----------~~~~~~a~~~~~~~~~~---~~ 51 (117)
T PF13659_consen 2 DRVLDPGCGSGTFLLAAL--------RR----G----AARVTGVDID-----------PEAVELARRNLPRNGLD---DR 51 (117)
T ss_dssp EEEEEETSTTCHHHHHHH--------HH----C----TCEEEEEESS-----------HHHHHHHHHHCHHCTTT---TT
T ss_pred CEEEEcCcchHHHHHHHH--------HH----C----CCeEEEEEEC-----------HHHHHHHHHHHHHccCC---ce
Confidence 589999999998877666 22 1 2677787774 2221111111 1111 02
Q ss_pred ceEEeecCCCccccc--CCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 129 QCFFTGVPGSFYGRL--FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l--~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
..+..+ ++..-. ++++++|+++++-=.+.....+. . -.++...|++.=.+
T Consensus 52 ~~~~~~---D~~~~~~~~~~~~~D~Iv~npP~~~~~~~~~-----------------~--------~~~~~~~~~~~~~~ 103 (117)
T PF13659_consen 52 VEVIVG---DARDLPEPLPDGKFDLIVTNPPYGPRSGDKA-----------------A--------LRRLYSRFLEAAAR 103 (117)
T ss_dssp EEEEES---HHHHHHHTCTTT-EEEEEE--STTSBTT-----------------------------GGCHHHHHHHHHHH
T ss_pred EEEEEC---chhhchhhccCceeEEEEECCCCccccccch-----------------h--------hHHHHHHHHHHHHH
Confidence 344444 554433 78899999998743322111110 0 01155678999999
Q ss_pred hhccCceEEEEee
Q 017514 207 ELVAEGRMVLTFL 219 (370)
Q Consensus 207 EL~~GG~lvl~~~ 219 (370)
=|+|||.+++.+.
T Consensus 104 ~L~~gG~~~~~~~ 116 (117)
T PF13659_consen 104 LLKPGGVLVFITP 116 (117)
T ss_dssp HEEEEEEEEEEEE
T ss_pred HcCCCeEEEEEeC
Confidence 9999999999875
|
... |
| >PF05891 Methyltransf_PK: AdoMet dependent proline di-methyltransferase; InterPro: IPR008576 This family consists of several eukaryotic proteins of unknown function that are S-adenosyl-L-methionine-dependent methyltransferase-like | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.013 Score=54.73 Aligned_cols=143 Identities=22% Similarity=0.292 Sum_probs=83.2
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcce-EEeCCCCCCchHHHHHhhHHHHHHHHHhhCC---CC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQ-VFLNDLPGNDFNTIFRSLASFQKILRKQLGS---AS 124 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~-v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~---~~ 124 (370)
.+..+.+|.|||.|+-|-.++ .|.++ |=+.|.. +.|.+..++..+. ..
T Consensus 54 ~~~~~alDcGAGIGRVTk~lL-----------------l~~f~~VDlVEp~-----------~~Fl~~a~~~l~~~~~~v 105 (218)
T PF05891_consen 54 PKFNRALDCGAGIGRVTKGLL-----------------LPVFDEVDLVEPV-----------EKFLEQAKEYLGKDNPRV 105 (218)
T ss_dssp ---SEEEEET-TTTHHHHHTC-----------------CCC-SEEEEEES------------HHHHHHHHHHTCCGGCCE
T ss_pred CCcceEEecccccchhHHHHH-----------------HHhcCEeEEeccC-----------HHHHHHHHHHhcccCCCc
Confidence 468999999999999887554 12222 3333332 4444443332222 22
Q ss_pred CCCCceEEeecCCCcccccCCC-CceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017514 125 GAAGQCFFTGVPGSFYGRLFPR-NSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKC 203 (370)
Q Consensus 125 ~~~~~~f~~~vpgSFy~~l~p~-~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~ 203 (370)
..+|..|.- +| -|+ ++.|++|.-||+-.|.+ +||..||+.
T Consensus 106 ---~~~~~~gLQ-~f----~P~~~~YDlIW~QW~lghLTD-------------------------------~dlv~fL~R 146 (218)
T PF05891_consen 106 ---GEFYCVGLQ-DF----TPEEGKYDLIWIQWCLGHLTD-------------------------------EDLVAFLKR 146 (218)
T ss_dssp ---EEEEES-GG-G--------TT-EEEEEEES-GGGS-H-------------------------------HHHHHHHHH
T ss_pred ---ceEEecCHh-hc----cCCCCcEeEEEehHhhccCCH-------------------------------HHHHHHHHH
Confidence 467877744 33 365 79999999998887665 789999999
Q ss_pred HHHhhccCceEEEEe-eccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceE
Q 017514 204 RSEELVAEGRMVLTF-LGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFT 282 (370)
Q Consensus 204 Ra~EL~~GG~lvl~~-~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~ 282 (370)
..+-|+|||.+++== .+.... ..+|.= =-...||.+.++.+++++| ++
T Consensus 147 Ck~~L~~~G~IvvKEN~~~~~~-----------------------------~~~D~~-DsSvTRs~~~~~~lF~~AG-l~ 195 (218)
T PF05891_consen 147 CKQALKPNGVIVVKENVSSSGF-----------------------------DEFDEE-DSSVTRSDEHFRELFKQAG-LR 195 (218)
T ss_dssp HHHHEEEEEEEEEEEEEESSSE-----------------------------EEEETT-TTEEEEEHHHHHHHHHHCT--E
T ss_pred HHHhCcCCcEEEEEecCCCCCC-----------------------------cccCCc-cCeeecCHHHHHHHHHHcC-CE
Confidence 999999999888731 111100 011111 1246789999999999999 77
Q ss_pred EEEEEEE
Q 017514 283 IDHLEVS 289 (370)
Q Consensus 283 i~~le~~ 289 (370)
|.+.+.-
T Consensus 196 ~v~~~~Q 202 (218)
T PF05891_consen 196 LVKEEKQ 202 (218)
T ss_dssp EEEEEE-
T ss_pred EEEeccc
Confidence 7666543
|
; GO: 0008168 methyltransferase activity; PDB: 1XTP_A 2EX4_B. |
| >PRK14968 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.12 Score=45.74 Aligned_cols=24 Identities=25% Similarity=0.230 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHhhccCceEEEEee
Q 017514 196 DFSLFLKCRSEELVAEGRMVLTFL 219 (370)
Q Consensus 196 D~~~fL~~Ra~EL~~GG~lvl~~~ 219 (370)
.+..|++.-.+-|+|||.+++...
T Consensus 126 ~~~~~i~~~~~~Lk~gG~~~~~~~ 149 (188)
T PRK14968 126 VIDRFLDEVGRYLKPGGRILLLQS 149 (188)
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEc
Confidence 356788888999999999988763
|
|
| >TIGR00438 rrmJ cell division protein FtsJ | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.028 Score=50.67 Aligned_cols=25 Identities=24% Similarity=0.295 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHhhccCceEEEEee
Q 017514 195 RDFSLFLKCRSEELVAEGRMVLTFL 219 (370)
Q Consensus 195 ~D~~~fL~~Ra~EL~~GG~lvl~~~ 219 (370)
++...+|+.-.+-|+|||++++...
T Consensus 123 ~~~~~~l~~~~~~LkpgG~lvi~~~ 147 (188)
T TIGR00438 123 DLVELALDIAKEVLKPKGNFVVKVF 147 (188)
T ss_pred HHHHHHHHHHHHHccCCCEEEEEEc
Confidence 3566788888999999999999753
|
|
| >PLN03075 nicotianamine synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.063 Score=52.50 Aligned_cols=108 Identities=13% Similarity=0.151 Sum_probs=62.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhC--CCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLG--SASGAA 127 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~--~~~~~~ 127 (370)
.+-+|||+|||.|+.|.+++. +.. .|.-++.--|.- +...+.-++... .++ ..
T Consensus 123 ~p~~VldIGcGpgpltaiila------a~~-------~p~~~~~giD~d-----------~~ai~~Ar~~~~~~~gL-~~ 177 (296)
T PLN03075 123 VPTKVAFVGSGPLPLTSIVLA------KHH-------LPTTSFHNFDID-----------PSANDVARRLVSSDPDL-SK 177 (296)
T ss_pred CCCEEEEECCCCcHHHHHHHH------Hhc-------CCCCEEEEEeCC-----------HHHHHHHHHHhhhccCc-cC
Confidence 568999999999998776661 111 144566666664 222111111110 111 00
Q ss_pred CceEEeecCCCcccccCC-CCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 128 GQCFFTGVPGSFYGRLFP-RNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~p-~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
+-.|..+ +--+ +.+ .+.+|++|+. ++|-+++.++ . ..|+.=++
T Consensus 178 rV~F~~~---Da~~-~~~~l~~FDlVF~~-ALi~~dk~~k----------------~---------------~vL~~l~~ 221 (296)
T PLN03075 178 RMFFHTA---DVMD-VTESLKEYDVVFLA-ALVGMDKEEK----------------V---------------KVIEHLGK 221 (296)
T ss_pred CcEEEEC---chhh-cccccCCcCEEEEe-cccccccccH----------------H---------------HHHHHHHH
Confidence 2356555 2212 332 3689999999 7665544111 1 14666688
Q ss_pred hhccCceEEEEe
Q 017514 207 ELVAEGRMVLTF 218 (370)
Q Consensus 207 EL~~GG~lvl~~ 218 (370)
-|+|||.+++-+
T Consensus 222 ~LkPGG~Lvlr~ 233 (296)
T PLN03075 222 HMAPGALLMLRS 233 (296)
T ss_pred hcCCCcEEEEec
Confidence 999999999877
|
|
| >PF05148 Methyltransf_8: Hypothetical methyltransferase; InterPro: IPR007823 This family consists of uncharacterised eukaryotic proteins which are related to S-adenosyl-L-methionine-dependent methyltransferases | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.017 Score=53.69 Aligned_cols=42 Identities=17% Similarity=0.183 Sum_probs=28.9
Q ss_pred CCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEee
Q 017514 144 FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFL 219 (370)
Q Consensus 144 ~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~ 219 (370)
++++|+|+++..-||.= .||..||+-=.+-|+|||.|.+.=.
T Consensus 118 L~~~svDv~VfcLSLMG----------------------------------Tn~~~fi~EA~RvLK~~G~L~IAEV 159 (219)
T PF05148_consen 118 LEDESVDVAVFCLSLMG----------------------------------TNWPDFIREANRVLKPGGILKIAEV 159 (219)
T ss_dssp --TT-EEEEEEES---S----------------------------------S-HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCceeEEEEEhhhhC----------------------------------CCcHHHHHHHHheeccCcEEEEEEe
Confidence 48999999988766542 3667788888899999999988643
|
; GO: 0008168 methyltransferase activity; PDB: 2ZFU_B. |
| >TIGR00536 hemK_fam HemK family putative methylases | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.047 Score=52.77 Aligned_cols=123 Identities=17% Similarity=0.217 Sum_probs=63.8
Q ss_pred eEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCCCC
Q 017514 52 VAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGAAG 128 (370)
Q Consensus 52 ~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~~~ 128 (370)
.+|+|+|||+|..++.+. ..+ |..+|+..|.- +.......+ ..+.. .+
T Consensus 116 ~~vLDlG~GsG~i~l~la--------~~~-------~~~~v~avDis-----------~~al~~a~~n~~~~~~~---~~ 166 (284)
T TIGR00536 116 LHILDLGTGSGCIALALA--------YEF-------PNAEVIAVDIS-----------PDALAVAEENAEKNQLE---HR 166 (284)
T ss_pred CEEEEEeccHhHHHHHHH--------HHC-------CCCEEEEEECC-----------HHHHHHHHHHHHHcCCC---Cc
Confidence 689999999998877665 221 34788888874 221111111 11111 01
Q ss_pred ceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCC----ceeeecCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNK----GNIFMASTSPPCVLTAYYEQFQRDFSLFLKCR 204 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk----~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~R 204 (370)
-.|+. |++++.+ |++++|+++|+ |+.+..+. ..+. .-.|..+.-. -.---.+...|++.-
T Consensus 167 v~~~~---~d~~~~~-~~~~fDlIvsN---------PPyi~~~~~~~~~~~~--~~eP~~AL~g-g~dgl~~~~~ii~~a 230 (284)
T TIGR00536 167 VEFIQ---SNLFEPL-AGQKIDIIVSN---------PPYIDEEDLADLPNVV--RFEPLLALVG-GDDGLNILRQIIELA 230 (284)
T ss_pred EEEEE---CchhccC-cCCCccEEEEC---------CCCCCcchhhcCCccc--ccCcHHHhcC-CCcHHHHHHHHHHHH
Confidence 23433 4666543 55689999986 22221100 0000 0001000000 000113556688888
Q ss_pred HHhhccCceEEEEee
Q 017514 205 SEELVAEGRMVLTFL 219 (370)
Q Consensus 205 a~EL~~GG~lvl~~~ 219 (370)
.+-|+|||.+++.+.
T Consensus 231 ~~~L~~gG~l~~e~g 245 (284)
T TIGR00536 231 PDYLKPNGFLVCEIG 245 (284)
T ss_pred HHhccCCCEEEEEEC
Confidence 889999999988774
|
The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. Both E. coli and H. influenzae have two members rather than one. The members from the Mycoplasmas have an additional C-terminal domain. |
| >PRK09328 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.047 Score=51.81 Aligned_cols=125 Identities=18% Similarity=0.274 Sum_probs=63.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhh--CCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL--GSASGAA 127 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~--~~~~~~~ 127 (370)
+..+|+|+|||+|..++.+. ... |..+++..|.- +......+... ....
T Consensus 108 ~~~~vLDiG~GsG~~~~~la--------~~~-------~~~~v~~iDis-----------~~~l~~a~~n~~~~~~~--- 158 (275)
T PRK09328 108 EPLRVLDLGTGSGAIALALA--------KER-------PDAEVTAVDIS-----------PEALAVARRNAKHGLGA--- 158 (275)
T ss_pred CCCEEEEEcCcHHHHHHHHH--------HHC-------CCCEEEEEECC-----------HHHHHHHHHHHHhCCCC---
Confidence 45789999999998887665 221 34788888874 22111111111 1100
Q ss_pred CceEEeecCCCcccccCCCCceeEEEeccccc---cccCCCCCccCCCceeeecCCCCHHHHHHHH-HHHHHHHHHHHHH
Q 017514 128 GQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQ---WLSQVPDGLESNKGNIFMASTSPPCVLTAYY-EQFQRDFSLFLKC 203 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alh---Wls~~P~~~~~nk~~i~~~~~s~~~v~~ay~-~Q~~~D~~~fL~~ 203 (370)
+-.|+.+ +++.. ++++++|+++|+--.. -+..+++.+... .|.. +.+. ...-+++..|++.
T Consensus 159 ~i~~~~~---d~~~~-~~~~~fD~Iv~npPy~~~~~~~~~~~~v~~~---------ep~~--al~~g~~g~~~~~~~~~~ 223 (275)
T PRK09328 159 RVEFLQG---DWFEP-LPGGRFDLIVSNPPYIPEADIHLLQPEVRDH---------EPHL--ALFGGEDGLDFYRRIIEQ 223 (275)
T ss_pred cEEEEEc---cccCc-CCCCceeEEEECCCcCCcchhhhCCchhhhc---------CCch--hhcCCCCHHHHHHHHHHH
Confidence 2233333 55433 3467999999852110 000011111100 0000 0000 0112455668888
Q ss_pred HHHhhccCceEEEEe
Q 017514 204 RSEELVAEGRMVLTF 218 (370)
Q Consensus 204 Ra~EL~~GG~lvl~~ 218 (370)
-.+-|+|||.+++..
T Consensus 224 ~~~~Lk~gG~l~~e~ 238 (275)
T PRK09328 224 APRYLKPGGWLLLEI 238 (275)
T ss_pred HHHhcccCCEEEEEE
Confidence 889999999999854
|
|
| >PF03291 Pox_MCEL: mRNA capping enzyme; InterPro: IPR004971 This is a family of viral mRNA capping enzymes | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.044 Score=54.45 Aligned_cols=49 Identities=18% Similarity=0.226 Sum_probs=36.6
Q ss_pred cCCCC--ceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeec
Q 017514 143 LFPRN--SVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLG 220 (370)
Q Consensus 143 l~p~~--sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g 220 (370)
.+++. .+|++-+-+|||..=... +-..+||+.-++-|+|||.++.+++.
T Consensus 138 ~~~~~~~~FDvVScQFalHY~Fese-----------------------------~~ar~~l~Nvs~~Lk~GG~FIgT~~d 188 (331)
T PF03291_consen 138 KLPPRSRKFDVVSCQFALHYAFESE-----------------------------EKARQFLKNVSSLLKPGGYFIGTTPD 188 (331)
T ss_dssp TSSSTTS-EEEEEEES-GGGGGSSH-----------------------------HHHHHHHHHHHHTEEEEEEEEEEEE-
T ss_pred hccccCCCcceeehHHHHHHhcCCH-----------------------------HHHHHHHHHHHHhcCCCCEEEEEecC
Confidence 45544 999999999999954411 23456999999999999999999983
|
The enzyme catalyses the first two reactions in the mRNA cap formation pathway. It is a heterodimer consisting of a large and small subunit. This entry is the large subunit. ; GO: 0006370 mRNA capping; PDB: 3EPP_A 3BGV_C 2VDW_C 1RI5_A 1RI3_A 1RI1_A 1Z3C_A 1RI2_A 2HV9_A 1RI4_A. |
| >PRK14966 unknown domain/N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase fusion protein; Provisional | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.039 Score=56.37 Aligned_cols=121 Identities=19% Similarity=0.213 Sum_probs=64.5
Q ss_pred eEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhh-CCCCCCCCce
Q 017514 52 VAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAAGQC 130 (370)
Q Consensus 52 ~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~-~~~~~~~~~~ 130 (370)
.+|+|+|||+|..++.+. +. .|..+|+..|+- +...+..++.. .... +-.
T Consensus 253 ~rVLDLGcGSG~IaiaLA--------~~-------~p~a~VtAVDiS-----------~~ALe~AreNa~~~g~---rV~ 303 (423)
T PRK14966 253 GRVWDLGTGSGAVAVTVA--------LE-------RPDAFVRASDIS-----------PPALETARKNAADLGA---RVE 303 (423)
T ss_pred CEEEEEeChhhHHHHHHH--------Hh-------CCCCEEEEEECC-----------HHHHHHHHHHHHHcCC---cEE
Confidence 489999999999887665 22 145788888884 32222221111 1110 223
Q ss_pred EEeecCCCcccccCC-CCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHH----HHHHHH--HHHHHHHHHHHH
Q 017514 131 FFTGVPGSFYGRLFP-RNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCV----LTAYYE--QFQRDFSLFLKC 203 (370)
Q Consensus 131 f~~~vpgSFy~~l~p-~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v----~~ay~~--Q~~~D~~~fL~~ 203 (370)
|. -+++.+..+| .+++|+++|+ |+.+...+..+ .++.+ ..|... ---..+..+++.
T Consensus 304 fi---~gDl~e~~l~~~~~FDLIVSN---------PPYI~~~e~~l-----~~~~v~~EP~~AL~gG~dGL~~yr~Ii~~ 366 (423)
T PRK14966 304 FA---HGSWFDTDMPSEGKWDIIVSN---------PPYIENGDKHL-----LQGDLRFEPQIALTDFSDGLSCIRTLAQG 366 (423)
T ss_pred EE---EcchhccccccCCCccEEEEC---------CCCCCcchhhh-----cchhhhcCHHHHhhCCCchHHHHHHHHHH
Confidence 43 3477665554 4689999996 44332211000 00000 011100 001124567777
Q ss_pred HHHhhccCceEEEEe
Q 017514 204 RSEELVAEGRMVLTF 218 (370)
Q Consensus 204 Ra~EL~~GG~lvl~~ 218 (370)
=.+-|+|||.+++..
T Consensus 367 a~~~LkpgG~lilEi 381 (423)
T PRK14966 367 APDRLAEGGFLLLEH 381 (423)
T ss_pred HHHhcCCCcEEEEEE
Confidence 778899999988755
|
|
| >TIGR00406 prmA ribosomal protein L11 methyltransferase | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.021 Score=55.36 Aligned_cols=21 Identities=14% Similarity=0.078 Sum_probs=16.1
Q ss_pred HHHHHHHhhccCceEEEEeec
Q 017514 200 FLKCRSEELVAEGRMVLTFLG 220 (370)
Q Consensus 200 fL~~Ra~EL~~GG~lvl~~~g 220 (370)
++..-.+-|+|||.+++....
T Consensus 241 ll~~~~~~LkpgG~li~sgi~ 261 (288)
T TIGR00406 241 LYPQFSRLVKPGGWLILSGIL 261 (288)
T ss_pred HHHHHHHHcCCCcEEEEEeCc
Confidence 455556789999999987654
|
Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis. |
| >KOG2904 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.19 Score=48.63 Aligned_cols=28 Identities=18% Similarity=0.208 Sum_probs=23.5
Q ss_pred HHHHHHHHHHhhccCceEEEEeeccCCC
Q 017514 197 FSLFLKCRSEELVAEGRMVLTFLGRKSQ 224 (370)
Q Consensus 197 ~~~fL~~Ra~EL~~GG~lvl~~~g~~~~ 224 (370)
+..|+..-.+-|+|||.+.+...+++..
T Consensus 264 ~~~~~~~a~R~Lq~gg~~~le~~~~~~~ 291 (328)
T KOG2904|consen 264 LVHYWLLATRMLQPGGFEQLELVERKEH 291 (328)
T ss_pred HHHHHHhhHhhcccCCeEEEEecccccC
Confidence 5567888889999999999999988543
|
|
| >PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.054 Score=49.31 Aligned_cols=35 Identities=26% Similarity=0.430 Sum_probs=24.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLP 98 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp 98 (370)
..-+|+|+|||+|..++.+. +. .+ +.-+|+.-|.-
T Consensus 40 ~~~~vlDlG~GtG~~s~~~a--------~~---~~---~~~~v~avD~~ 74 (198)
T PRK00377 40 KGDMILDIGCGTGSVTVEAS--------LL---VG---ETGKVYAVDKD 74 (198)
T ss_pred CcCEEEEeCCcCCHHHHHHH--------HH---hC---CCCEEEEEECC
Confidence 34699999999998887655 21 11 34678888874
|
|
| >TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.097 Score=53.59 Aligned_cols=128 Identities=16% Similarity=0.055 Sum_probs=71.5
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhC-CCCCCCCc
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLG-SASGAAGQ 129 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~-~~~~~~~~ 129 (370)
.-+|+|+|||.|.-|+.+. +.. +.-+|+..|.- +.......+... .+. .
T Consensus 239 g~~VLDlcag~G~kt~~la--------~~~-------~~~~v~a~D~~-----------~~~l~~~~~n~~r~g~---~- 288 (426)
T TIGR00563 239 EETILDACAAPGGKTTHIL--------ELA-------PQAQVVALDIH-----------EHRLKRVYENLKRLGL---T- 288 (426)
T ss_pred CCeEEEeCCCccHHHHHHH--------HHc-------CCCeEEEEeCC-----------HHHHHHHHHHHHHcCC---C-
Confidence 3699999999999998766 321 13578888874 222222211111 111 1
Q ss_pred eEEeecCCCcccc--cCCCCceeEEEe---ccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017514 130 CFFTGVPGSFYGR--LFPRNSVHLFHS---SYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCR 204 (370)
Q Consensus 130 ~f~~~vpgSFy~~--l~p~~sv~~~~S---~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~R 204 (370)
+-+..+.++...- ..+.+++|.++. .+++.-+.+.|+... ..++..+. +..+.-..+|..=
T Consensus 289 ~~v~~~~~d~~~~~~~~~~~~fD~VllDaPcSg~G~~~~~p~~~~---------~~~~~~~~-----~l~~lQ~~lL~~a 354 (426)
T TIGR00563 289 IKAETKDGDGRGPSQWAENEQFDRILLDAPCSATGVIRRHPDIKW---------LRKPRDIA-----ELAELQSEILDAI 354 (426)
T ss_pred eEEEEeccccccccccccccccCEEEEcCCCCCCcccccCcchhh---------cCCHHHHH-----HHHHHHHHHHHHH
Confidence 2222223333221 125678999985 345555556665321 01222232 2233445578877
Q ss_pred HHhhccCceEEEEeeccC
Q 017514 205 SEELVAEGRMVLTFLGRK 222 (370)
Q Consensus 205 a~EL~~GG~lvl~~~g~~ 222 (370)
++-|+|||+|+.+.+.-.
T Consensus 355 ~~~LkpgG~lvystcs~~ 372 (426)
T TIGR00563 355 WPLLKTGGTLVYATCSVL 372 (426)
T ss_pred HHhcCCCcEEEEEeCCCC
Confidence 888999999999988654
|
The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles. |
| >COG2890 HemK Methylase of polypeptide chain release factors [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.072 Score=51.63 Aligned_cols=125 Identities=17% Similarity=0.165 Sum_probs=68.1
Q ss_pred EEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHH-HhhCCCCCCCCceE
Q 017514 53 AIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILR-KQLGSASGAAGQCF 131 (370)
Q Consensus 53 ~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~-~~~~~~~~~~~~~f 131 (370)
+|+|+|||||.-++.+. ..+ |...|+..|+- +.-...-. +....+. .+..+
T Consensus 113 ~ilDlGTGSG~iai~la--------~~~-------~~~~V~a~Dis-----------~~Al~~A~~Na~~~~l--~~~~~ 164 (280)
T COG2890 113 RILDLGTGSGAIAIALA--------KEG-------PDAEVIAVDIS-----------PDALALARENAERNGL--VRVLV 164 (280)
T ss_pred cEEEecCChHHHHHHHH--------hhC-------cCCeEEEEECC-----------HHHHHHHHHHHHHcCC--ccEEE
Confidence 89999999999888776 432 55799999985 32211111 1111111 02233
Q ss_pred EeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHH-HHHHHHHHHHHHHHhhcc
Q 017514 132 FTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQ-FQRDFSLFLKCRSEELVA 210 (370)
Q Consensus 132 ~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q-~~~D~~~fL~~Ra~EL~~ 210 (370)
+.+ +.+..+-. .+|+++|+ |+.+..+.-..-...-.-++....+..- --....+|+..=..-|+|
T Consensus 165 ~~~---dlf~~~~~--~fDlIVsN---------PPYip~~~~~~~~~~~~~EP~~Al~~g~dGl~~~~~i~~~a~~~l~~ 230 (280)
T COG2890 165 VQS---DLFEPLRG--KFDLIVSN---------PPYIPAEDPELLPEVVRYEPLLALVGGGDGLEVYRRILGEAPDILKP 230 (280)
T ss_pred Eee---ecccccCC--ceeEEEeC---------CCCCCCcccccChhhhccCHHHHHccCccHHHHHHHHHHhhHHHcCC
Confidence 222 66666655 89999996 7766643000000000000001111111 112345588888888999
Q ss_pred CceEEEEee
Q 017514 211 EGRMVLTFL 219 (370)
Q Consensus 211 GG~lvl~~~ 219 (370)
||.+++...
T Consensus 231 ~g~l~le~g 239 (280)
T COG2890 231 GGVLILEIG 239 (280)
T ss_pred CcEEEEEEC
Confidence 999888764
|
|
| >COG2813 RsmC 16S RNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.078 Score=51.77 Aligned_cols=107 Identities=20% Similarity=0.252 Sum_probs=64.0
Q ss_pred eEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc-e
Q 017514 52 VAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ-C 130 (370)
Q Consensus 52 ~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~-~ 130 (370)
.+|+|+|||-|..++.+. +. .|..++.+.|.- ++.+..-+.-+. .+.. .+ +
T Consensus 160 ~~vlDlGCG~Gvlg~~la--------~~-------~p~~~vtmvDvn-------~~Av~~ar~Nl~---~N~~---~~~~ 211 (300)
T COG2813 160 GKVLDLGCGYGVLGLVLA--------KK-------SPQAKLTLVDVN-------ARAVESARKNLA---ANGV---ENTE 211 (300)
T ss_pred CcEEEeCCCccHHHHHHH--------Hh-------CCCCeEEEEecC-------HHHHHHHHHhHH---HcCC---CccE
Confidence 499999999999888766 43 267999999974 333332111111 1111 22 3
Q ss_pred EEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 017514 131 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 210 (370)
Q Consensus 131 f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~ 210 (370)
.... +-|..+.. ++|+++|+ |+-.. .......+. ..++..=++-|++
T Consensus 212 v~~s---~~~~~v~~--kfd~IisN---------PPfh~--------G~~v~~~~~-----------~~~i~~A~~~L~~ 258 (300)
T COG2813 212 VWAS---NLYEPVEG--KFDLIISN---------PPFHA--------GKAVVHSLA-----------QEIIAAAARHLKP 258 (300)
T ss_pred EEEe---cccccccc--cccEEEeC---------CCccC--------CcchhHHHH-----------HHHHHHHHHhhcc
Confidence 3333 56677666 89999986 43111 110011111 1266666788999
Q ss_pred CceEEEEee
Q 017514 211 EGRMVLTFL 219 (370)
Q Consensus 211 GG~lvl~~~ 219 (370)
||.|.++.-
T Consensus 259 gGeL~iVan 267 (300)
T COG2813 259 GGELWIVAN 267 (300)
T ss_pred CCEEEEEEc
Confidence 999999886
|
|
| >KOG3045 consensus Predicted RNA methylase involved in rRNA processing [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.033 Score=53.25 Aligned_cols=25 Identities=16% Similarity=0.246 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHhhccCceEEEEee
Q 017514 195 RDFSLFLKCRSEELVAEGRMVLTFL 219 (370)
Q Consensus 195 ~D~~~fL~~Ra~EL~~GG~lvl~~~ 219 (370)
.||..|++--.+-|++||.+.+.=.
T Consensus 241 tn~~df~kEa~RiLk~gG~l~IAEv 265 (325)
T KOG3045|consen 241 TNLADFIKEANRILKPGGLLYIAEV 265 (325)
T ss_pred ccHHHHHHHHHHHhccCceEEEEeh
Confidence 4677799999999999999998754
|
|
| >PRK10901 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.079 Score=54.28 Aligned_cols=125 Identities=14% Similarity=0.084 Sum_probs=66.9
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhC-CCCCCCCc
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLG-SASGAAGQ 129 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~-~~~~~~~~ 129 (370)
.-+|+|+|||+|.-|+.+. +.. +...|+..|+- +......++... .+. ..
T Consensus 245 g~~VLDlgaG~G~~t~~la--------~~~-------~~~~v~a~D~s-----------~~~l~~~~~n~~~~g~---~~ 295 (427)
T PRK10901 245 GERVLDACAAPGGKTAHIL--------ELA-------PQAQVVALDID-----------AQRLERVRENLQRLGL---KA 295 (427)
T ss_pred CCEEEEeCCCCChHHHHHH--------HHc-------CCCEEEEEeCC-----------HHHHHHHHHHHHHcCC---Ce
Confidence 4689999999999988666 321 12567888874 222222211111 111 12
Q ss_pred eEEeecCCCccc--ccCCCCceeEEEec---cccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017514 130 CFFTGVPGSFYG--RLFPRNSVHLFHSS---YSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCR 204 (370)
Q Consensus 130 ~f~~~vpgSFy~--~l~p~~sv~~~~S~---~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~R 204 (370)
.++.+ +..+ ..++++++|.+++. +...-+.+-|+... . ..++- ...+......+|..=
T Consensus 296 ~~~~~---D~~~~~~~~~~~~fD~Vl~D~Pcs~~G~~~~~p~~~~--------~--~~~~~----l~~l~~~q~~iL~~a 358 (427)
T PRK10901 296 TVIVG---DARDPAQWWDGQPFDRILLDAPCSATGVIRRHPDIKW--------L--RRPED----IAALAALQSEILDAL 358 (427)
T ss_pred EEEEc---CcccchhhcccCCCCEEEECCCCCcccccccCccccc--------c--CCHHH----HHHHHHHHHHHHHHH
Confidence 23332 4422 23456789999842 22222233343211 0 01111 122334556688888
Q ss_pred HHhhccCceEEEEeecc
Q 017514 205 SEELVAEGRMVLTFLGR 221 (370)
Q Consensus 205 a~EL~~GG~lvl~~~g~ 221 (370)
.+-|+|||+|+.+.+..
T Consensus 359 ~~~LkpGG~lvystcs~ 375 (427)
T PRK10901 359 WPLLKPGGTLLYATCSI 375 (427)
T ss_pred HHhcCCCCEEEEEeCCC
Confidence 89999999999887643
|
|
| >PRK14904 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.1 Score=53.76 Aligned_cols=125 Identities=11% Similarity=0.014 Sum_probs=70.2
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhC-CCCCCCCc
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLG-SASGAAGQ 129 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~-~~~~~~~~ 129 (370)
.-+|+|+|||+|..|+.+. +.. + +.-+|+..|+- +......++... .+. .+
T Consensus 251 g~~VLDlgaG~G~kt~~la--------~~~---~---~~~~V~avD~s-----------~~~l~~~~~~~~~~g~---~~ 302 (445)
T PRK14904 251 GSTVLDLCAAPGGKSTFMA--------ELM---Q---NRGQITAVDRY-----------PQKLEKIRSHASALGI---TI 302 (445)
T ss_pred CCEEEEECCCCCHHHHHHH--------HHh---C---CCcEEEEEECC-----------HHHHHHHHHHHHHhCC---Ce
Confidence 3689999999999998666 221 1 12578888886 333222222111 011 12
Q ss_pred -eEEeecCCCcccccCCCCceeEEEe----ccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017514 130 -CFFTGVPGSFYGRLFPRNSVHLFHS----SYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCR 204 (370)
Q Consensus 130 -~f~~~vpgSFy~~l~p~~sv~~~~S----~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~R 204 (370)
.++.+ +. ..+.|++++|.++. +.+-+|-. -|+... ..++..+ .+..+.-..+|..=
T Consensus 303 v~~~~~---Da-~~~~~~~~fD~Vl~D~Pcsg~g~~~r-~p~~~~---------~~~~~~~-----~~l~~~q~~iL~~a 363 (445)
T PRK14904 303 IETIEG---DA-RSFSPEEQPDAILLDAPCTGTGVLGR-RAELRW---------KLTPEKL-----AELVGLQAELLDHA 363 (445)
T ss_pred EEEEeC---cc-cccccCCCCCEEEEcCCCCCcchhhc-Ccchhh---------cCCHHHH-----HHHHHHHHHHHHHH
Confidence 33333 44 23447778999883 33333332 243211 0112222 22334556689988
Q ss_pred HHhhccCceEEEEeeccC
Q 017514 205 SEELVAEGRMVLTFLGRK 222 (370)
Q Consensus 205 a~EL~~GG~lvl~~~g~~ 222 (370)
++-|+|||+|+...+...
T Consensus 364 ~~~lkpgG~lvystcs~~ 381 (445)
T PRK14904 364 ASLLKPGGVLVYATCSIE 381 (445)
T ss_pred HHhcCCCcEEEEEeCCCC
Confidence 999999999999887654
|
|
| >TIGR03704 PrmC_rel_meth putative protein-(glutamine-N5) methyltransferase, unknown substrate-specific | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.17 Score=48.09 Aligned_cols=33 Identities=21% Similarity=0.374 Sum_probs=24.8
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLP 98 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp 98 (370)
..+|+|+|||+|..++.+. +.+ |..+|+..|.-
T Consensus 87 ~~~vLDlg~GsG~i~l~la--------~~~-------~~~~v~~vDis 119 (251)
T TIGR03704 87 TLVVVDLCCGSGAVGAALA--------AAL-------DGIELHAADID 119 (251)
T ss_pred CCEEEEecCchHHHHHHHH--------HhC-------CCCEEEEEECC
Confidence 4689999999999988766 221 34678888874
|
This protein family is closely related to two different families of protein-(glutamine-N5) methyltransferase. The first is PrmB, which modifies ribosomal protein L3 in some bacteria. The second is PrmC (HemK), which modifies peptide chain release factors 1 and 2 in most bacteria and also in eukaryotes. The glutamine side chain-binding motif NPPY shared by PrmB and PrmC is N[VAT]PY in this family. The protein substrate is unknown. |
| >KOG4300 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.085 Score=49.02 Aligned_cols=157 Identities=16% Similarity=0.116 Sum_probs=87.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHH----HHhhCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKIL----RKQLGSASG 125 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~----~~~~~~~~~ 125 (370)
.-.-++++|||+|+|=- +. .-.|--.|.+-|=- +.+.+-. .++....+
T Consensus 76 ~K~~vLEvgcGtG~Nfk-------------fy---~~~p~~svt~lDpn-----------~~mee~~~ks~~E~k~~~~- 127 (252)
T KOG4300|consen 76 GKGDVLEVGCGTGANFK-------------FY---PWKPINSVTCLDPN-----------EKMEEIADKSAAEKKPLQV- 127 (252)
T ss_pred CccceEEecccCCCCcc-------------cc---cCCCCceEEEeCCc-----------HHHHHHHHHHHhhccCcce-
Confidence 34678999999999921 11 11244566666643 3332222 22222222
Q ss_pred CCCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 126 AAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRS 205 (370)
Q Consensus 126 ~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra 205 (370)
..|+.|-+.+. -| +|+.|+|.+++..+|-= ..++.. -|+.-.
T Consensus 128 ---~~fvva~ge~l-~~-l~d~s~DtVV~TlvLCS------------------ve~~~k---------------~L~e~~ 169 (252)
T KOG4300|consen 128 ---ERFVVADGENL-PQ-LADGSYDTVVCTLVLCS------------------VEDPVK---------------QLNEVR 169 (252)
T ss_pred ---EEEEeechhcC-cc-cccCCeeeEEEEEEEec------------------cCCHHH---------------HHHHHH
Confidence 35777766433 12 29999999998876632 111222 355557
Q ss_pred HhhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEE
Q 017514 206 EELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDH 285 (370)
Q Consensus 206 ~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~ 285 (370)
+-|+|||++++.=-|+..-+ ....+|+...+-+-.+..+| +.=..|.-+.++++. |++.+
T Consensus 170 rlLRpgG~iifiEHva~~y~----~~n~i~q~v~ep~~~~~~dG---------------C~ltrd~~e~Leda~-f~~~~ 229 (252)
T KOG4300|consen 170 RLLRPGGRIIFIEHVAGEYG----FWNRILQQVAEPLWHLESDG---------------CVLTRDTGELLEDAE-FSIDS 229 (252)
T ss_pred HhcCCCcEEEEEecccccch----HHHHHHHHHhchhhheeccc---------------eEEehhHHHHhhhcc-cccch
Confidence 78999999999877665431 12234443333333343334 222345556677664 88887
Q ss_pred EEEEeec
Q 017514 286 LEVSEVN 292 (370)
Q Consensus 286 le~~~~~ 292 (370)
++.+..+
T Consensus 230 ~kr~~~~ 236 (252)
T KOG4300|consen 230 CKRFNFG 236 (252)
T ss_pred hhcccCC
Confidence 7766543
|
|
| >PRK14903 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.1 Score=53.68 Aligned_cols=125 Identities=12% Similarity=0.110 Sum_probs=72.9
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~~ 127 (370)
.-+|+|+|||+|.-|+.+. +.. + +.-+|+..|+- +.......+ ..|.
T Consensus 238 g~~VLD~cagpGgkt~~la--------~~~---~---~~g~V~a~Dis-----------~~rl~~~~~n~~r~g~----- 287 (431)
T PRK14903 238 GLRVLDTCAAPGGKTTAIA--------ELM---K---DQGKILAVDIS-----------REKIQLVEKHAKRLKL----- 287 (431)
T ss_pred CCEEEEeCCCccHHHHHHH--------HHc---C---CCCEEEEEECC-----------HHHHHHHHHHHHHcCC-----
Confidence 3589999999999998766 321 1 24689999985 222111111 1121
Q ss_pred Cc-eEEeecCCCccccc--CCCCceeEEEe---ccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHH
Q 017514 128 GQ-CFFTGVPGSFYGRL--FPRNSVHLFHS---SYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFL 201 (370)
Q Consensus 128 ~~-~f~~~vpgSFy~~l--~p~~sv~~~~S---~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL 201 (370)
.+ .+..+ +.. .+ +.++++|.++. .+.+..+.+-|+... ..++.. ..+..+.-..+|
T Consensus 288 ~~v~~~~~---Da~-~l~~~~~~~fD~Vl~DaPCsg~G~~~~~p~~~~---------~~~~~~-----~~~l~~~Q~~iL 349 (431)
T PRK14903 288 SSIEIKIA---DAE-RLTEYVQDTFDRILVDAPCTSLGTARNHPEVLR---------RVNKED-----FKKLSEIQLRIV 349 (431)
T ss_pred CeEEEEEC---chh-hhhhhhhccCCEEEECCCCCCCccccCChHHHH---------hCCHHH-----HHHHHHHHHHHH
Confidence 12 23332 321 11 23567899885 355666666664321 011111 233444556788
Q ss_pred HHHHHhhccCceEEEEeeccCC
Q 017514 202 KCRSEELVAEGRMVLTFLGRKS 223 (370)
Q Consensus 202 ~~Ra~EL~~GG~lvl~~~g~~~ 223 (370)
..=++-|+|||+|+.+.+....
T Consensus 350 ~~a~~~LkpGG~LvYsTCs~~~ 371 (431)
T PRK14903 350 SQAWKLLEKGGILLYSTCTVTK 371 (431)
T ss_pred HHHHHhcCCCCEEEEEECCCCh
Confidence 8889999999999999887543
|
|
| >PRK00811 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=94.64 E-value=0.18 Score=48.80 Aligned_cols=22 Identities=18% Similarity=0.196 Sum_probs=17.8
Q ss_pred CCCceEEEeecCCCCcchHHHH
Q 017514 48 SPTKVAIADLGCSSGPNTLLVA 69 (370)
Q Consensus 48 ~~~~~~IaD~Gcs~G~Ns~~~~ 69 (370)
.+++-+|+|+|||+|..+..++
T Consensus 74 ~~~p~~VL~iG~G~G~~~~~~l 95 (283)
T PRK00811 74 HPNPKRVLIIGGGDGGTLREVL 95 (283)
T ss_pred CCCCCEEEEEecCchHHHHHHH
Confidence 3567899999999998877655
|
|
| >PF02390 Methyltransf_4: Putative methyltransferase ; InterPro: IPR003358 This entry represents tRNA (guanine-N-7) methyltransferase (2 | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.14 Score=46.88 Aligned_cols=113 Identities=23% Similarity=0.405 Sum_probs=66.1
Q ss_pred EEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc-eE
Q 017514 53 AIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ-CF 131 (370)
Q Consensus 53 ~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~-~f 131 (370)
.++|+|||.|...+... .. .|+..++--|.- .+.+.+.+.. ... .+. .+ .+
T Consensus 20 l~lEIG~G~G~~l~~~A--------~~-------~Pd~n~iGiE~~---~~~v~~a~~~----~~~-~~l-----~Nv~~ 71 (195)
T PF02390_consen 20 LILEIGCGKGEFLIELA--------KR-------NPDINFIGIEIR---KKRVAKALRK----AEK-RGL-----KNVRF 71 (195)
T ss_dssp EEEEET-TTSHHHHHHH--------HH-------STTSEEEEEES----HHHHHHHHHH----HHH-HTT-----SSEEE
T ss_pred eEEEecCCCCHHHHHHH--------HH-------CCCCCEEEEecc---hHHHHHHHHH----HHh-hcc-----cceEE
Confidence 89999999998876554 32 267888888874 2233333221 111 122 34 44
Q ss_pred EeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 017514 132 FTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAE 211 (370)
Q Consensus 132 ~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~G 211 (370)
+.+=...+...++|++||+-++=.+-=-| |..-- .|.++. ++ .||..=++-|+||
T Consensus 72 ~~~da~~~l~~~~~~~~v~~i~i~FPDPW----pK~rH-~krRl~----~~----------------~fl~~~~~~L~~g 126 (195)
T PF02390_consen 72 LRGDARELLRRLFPPGSVDRIYINFPDPW----PKKRH-HKRRLV----NP----------------EFLELLARVLKPG 126 (195)
T ss_dssp EES-CTTHHHHHSTTTSEEEEEEES---------SGGG-GGGSTT----SH----------------HHHHHHHHHEEEE
T ss_pred EEccHHHHHhhcccCCchheEEEeCCCCC----cccch-hhhhcC----Cc----------------hHHHHHHHHcCCC
Confidence 44445566788999999999998887777 43110 122221 11 2788889999999
Q ss_pred ceEEEEe
Q 017514 212 GRMVLTF 218 (370)
Q Consensus 212 G~lvl~~ 218 (370)
|.+.+..
T Consensus 127 G~l~~~T 133 (195)
T PF02390_consen 127 GELYFAT 133 (195)
T ss_dssp EEEEEEE
T ss_pred CEEEEEe
Confidence 9887664
|
1.1.33 from EC), which catalyses the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. Capping of the pre-mRNA 5' end by addition a monomethylated guanosine cap (m(7)G) is an essential and the earliest modification in the biogenesis of mRNA []. The reaction is catalysed by three enzymes: triphosphatase, guanylyltransferase, and tRNA (guanine-N-7) methyltransferase [, ].; GO: 0008176 tRNA (guanine-N7-)-methyltransferase activity, 0006400 tRNA modification; PDB: 3DXZ_A 3DXY_A 3DXX_A 3CKK_A 3P2I_B 3P2K_D 3P2E_A 3MTE_B 3PB3_B 1YZH_B .... |
| >PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=94.49 E-value=0.11 Score=49.06 Aligned_cols=18 Identities=28% Similarity=0.560 Sum_probs=14.4
Q ss_pred CceEEEeecCCCCcchHH
Q 017514 50 TKVAIADLGCSSGPNTLL 67 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~ 67 (370)
..-+|+|+|||+|..++.
T Consensus 119 ~~~~VLDiGcGsG~l~i~ 136 (250)
T PRK00517 119 PGKTVLDVGCGSGILAIA 136 (250)
T ss_pred CCCEEEEeCCcHHHHHHH
Confidence 347999999999976654
|
|
| >PRK14902 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=94.45 E-value=0.39 Score=49.36 Aligned_cols=124 Identities=15% Similarity=0.093 Sum_probs=65.7
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~~ 127 (370)
.-+|+|+|||+|..|+.+. +.. + +.-+|+..|+- +.......+ ..|-
T Consensus 251 g~~VLDlgaG~G~~t~~la--------~~~---~---~~~~v~avDi~-----------~~~l~~~~~n~~~~g~----- 300 (444)
T PRK14902 251 GDTVLDACAAPGGKTTHIA--------ELL---K---NTGKVVALDIH-----------EHKLKLIEENAKRLGL----- 300 (444)
T ss_pred CCEEEEeCCCCCHHHHHHH--------HHh---C---CCCEEEEEeCC-----------HHHHHHHHHHHHHcCC-----
Confidence 3689999999999998766 221 1 23578888874 221111111 1121
Q ss_pred CceEEeecCCCcccc--cCCCCceeEEEec---cccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHH
Q 017514 128 GQCFFTGVPGSFYGR--LFPRNSVHLFHSS---YSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLK 202 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~--l~p~~sv~~~~S~---~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~ 202 (370)
.+ +.-+-+++..- -++ +++|++++. +.+..+++.|+.... .++..+ ....+--..+|+
T Consensus 301 ~~--v~~~~~D~~~~~~~~~-~~fD~Vl~D~Pcsg~G~~~~~p~~~~~---------~~~~~~-----~~l~~~q~~iL~ 363 (444)
T PRK14902 301 TN--IETKALDARKVHEKFA-EKFDKILVDAPCSGLGVIRRKPDIKYN---------KTKEDI-----ESLQEIQLEILE 363 (444)
T ss_pred Ce--EEEEeCCcccccchhc-ccCCEEEEcCCCCCCeeeccCcchhhc---------CCHHHH-----HHHHHHHHHHHH
Confidence 12 11222344221 123 789999863 334444444542110 111111 112223345788
Q ss_pred HHHHhhccCceEEEEeecc
Q 017514 203 CRSEELVAEGRMVLTFLGR 221 (370)
Q Consensus 203 ~Ra~EL~~GG~lvl~~~g~ 221 (370)
.=.+-|+|||+|+.+.+..
T Consensus 364 ~a~~~LkpGG~lvystcs~ 382 (444)
T PRK14902 364 SVAQYLKKGGILVYSTCTI 382 (444)
T ss_pred HHHHHcCCCCEEEEEcCCC
Confidence 8888999999999766543
|
|
| >PRK01544 bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=94.24 E-value=0.25 Score=51.82 Aligned_cols=140 Identities=17% Similarity=0.154 Sum_probs=85.8
Q ss_pred HHHHHHHHHhHHHHHHHHHhhcccCCCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCch
Q 017514 23 LVQEKVISIAKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDF 102 (370)
Q Consensus 23 ~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDF 102 (370)
..|++.++...|.+.-....+.. .+.-.++|+|||.|..++... +. .|+.-++--|.-.
T Consensus 323 ~~q~~~~e~~~p~~~i~~eklf~---~~~p~~lEIG~G~G~~~~~~A--------~~-------~p~~~~iGiE~~~--- 381 (506)
T PRK01544 323 GVQQNLLDNELPKYLFSKEKLVN---EKRKVFLEIGFGMGEHFINQA--------KM-------NPDALFIGVEVYL--- 381 (506)
T ss_pred HHHHHHHHhhhhhhCCCHHHhCC---CCCceEEEECCCchHHHHHHH--------Hh-------CCCCCEEEEEeeH---
Confidence 37888888888876644333322 345789999999998877555 32 2556666666542
Q ss_pred HHHHHhhHHHHHHHHHhhCCCCCCCCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCC
Q 017514 103 NTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSP 182 (370)
Q Consensus 103 ntLF~~l~~~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~ 182 (370)
+.+-+.+.. . .+.+ . .++.+..--..+....||++|||-++-++.=-| |+.-- .|.++. ++
T Consensus 382 ~~~~~~~~~----~-~~~~--l---~N~~~~~~~~~~~~~~~~~~sv~~i~i~FPDPW----pKkrh-~krRl~----~~ 442 (506)
T PRK01544 382 NGVANVLKL----A-GEQN--I---TNFLLFPNNLDLILNDLPNNSLDGIYILFPDPW----IKNKQ-KKKRIF----NK 442 (506)
T ss_pred HHHHHHHHH----H-HHcC--C---CeEEEEcCCHHHHHHhcCcccccEEEEECCCCC----CCCCC-cccccc----CH
Confidence 233333321 1 1112 2 344443222233567789999999999998888 54211 233331 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEe
Q 017514 183 PCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTF 218 (370)
Q Consensus 183 ~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~ 218 (370)
.||+.=++-|+|||.+.+..
T Consensus 443 ----------------~fl~~~~~~Lk~gG~i~~~T 462 (506)
T PRK01544 443 ----------------ERLKILQDKLKDNGNLVFAS 462 (506)
T ss_pred ----------------HHHHHHHHhcCCCCEEEEEc
Confidence 27888899999999998764
|
|
| >TIGR03439 methyl_EasF probable methyltransferase domain, EasF family | Back alignment and domain information |
|---|
Probab=94.05 E-value=0.53 Score=46.55 Aligned_cols=121 Identities=18% Similarity=0.278 Sum_probs=66.1
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhC-CCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLG-SASGAA 127 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~-~~~~~~ 127 (370)
+...+|+|||||+|.-|..+++.+. +. . ..+.++--|+. .+.......... ..+
T Consensus 75 ~~~~~lIELGsG~~~Kt~~LL~aL~----~~------~-~~~~Y~plDIS-----------~~~L~~a~~~L~~~~~--- 129 (319)
T TIGR03439 75 PSGSMLVELGSGNLRKVGILLEALE----RQ------K-KSVDYYALDVS-----------RSELQRTLAELPLGNF--- 129 (319)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHH----hc------C-CCceEEEEECC-----------HHHHHHHHHhhhhccC---
Confidence 3456899999999999998885553 11 1 13788888885 222111111112 223
Q ss_pred CceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCC-----CCHHHHHHHHHHHHHHHHHHHH
Q 017514 128 GQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMAST-----SPPCVLTAYYEQFQRDFSLFLK 202 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~-----s~~~v~~ay~~Q~~~D~~~fL~ 202 (370)
+.+=+.|+-|+|.. .++||.+ |.. ..++..++.-.+ .|++ -..||+
T Consensus 130 p~l~v~~l~gdy~~---------------~l~~l~~-~~~-~~~~r~~~flGSsiGNf~~~e------------a~~fL~ 180 (319)
T TIGR03439 130 SHVRCAGLLGTYDD---------------GLAWLKR-PEN-RSRPTTILWLGSSIGNFSRPE------------AAAFLA 180 (319)
T ss_pred CCeEEEEEEecHHH---------------HHhhccc-ccc-cCCccEEEEeCccccCCCHHH------------HHHHHH
Confidence 44666777788843 3445433 100 011111221111 2222 234776
Q ss_pred HHHH-hhccCceEEEEeeccCC
Q 017514 203 CRSE-ELVAEGRMVLTFLGRKS 223 (370)
Q Consensus 203 ~Ra~-EL~~GG~lvl~~~g~~~ 223 (370)
.-++ -|.|||.|++.+=+.++
T Consensus 181 ~~~~~~l~~~d~lLiG~D~~k~ 202 (319)
T TIGR03439 181 GFLATALSPSDSFLIGLDGCKD 202 (319)
T ss_pred HHHHhhCCCCCEEEEecCCCCC
Confidence 6667 89999999997755443
|
This model represents an uncharacterized domain of about 300 amino acids with homology to S-adenosylmethionine-dependent methyltransferases. Proteins with this domain are exclusively fungal. A few, such as EasF from Neotyphodium lolii, are associated with the biosynthesis of ergot alkaloids, a class of fungal secondary metabolites. EasF may, in fact, be the AdoMet:dimethylallyltryptophan N-methyltransferase, the enzyme that follows tryptophan dimethylallyltransferase (DMATS) in ergot alkaloid biosynthesis. Several other members of this family, including mug158 (meiotically up-regulated gene 158 protein) from Schizosaccharomyces pombe, contain an additional uncharacterized domain DUF323 (pfam03781). |
| >PRK07402 precorrin-6B methylase; Provisional | Back alignment and domain information |
|---|
Probab=93.99 E-value=0.48 Score=42.89 Aligned_cols=23 Identities=26% Similarity=0.222 Sum_probs=18.1
Q ss_pred HHHHHHHHHHhhccCceEEEEee
Q 017514 197 FSLFLKCRSEELVAEGRMVLTFL 219 (370)
Q Consensus 197 ~~~fL~~Ra~EL~~GG~lvl~~~ 219 (370)
+..+|+.-.+-|+|||++++...
T Consensus 121 ~~~~l~~~~~~LkpgG~li~~~~ 143 (196)
T PRK07402 121 IKEILQAVWQYLKPGGRLVATAS 143 (196)
T ss_pred HHHHHHHHHHhcCCCeEEEEEee
Confidence 34567776777999999999875
|
|
| >PF12147 Methyltransf_20: Putative methyltransferase; InterPro: IPR022744 This C-terminal region is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=93.79 E-value=4.4 Score=39.70 Aligned_cols=166 Identities=19% Similarity=0.226 Sum_probs=91.2
Q ss_pred hHHHHHHHHHhhcccCCCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHH
Q 017514 32 AKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLAS 111 (370)
Q Consensus 32 ~~~~l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~ 111 (370)
+..+|+++|..+.. ...+++|+|+-||+|+- +++++.+. ...| .+|.++|.- +.
T Consensus 119 l~~~i~~ai~~L~~--~g~pvrIlDIAaG~GRY-------vlDal~~~-----~~~~-~~i~LrDys-----------~~ 172 (311)
T PF12147_consen 119 LEELIRQAIARLRE--QGRPVRILDIAAGHGRY-------VLDALEKH-----PERP-DSILLRDYS-----------PI 172 (311)
T ss_pred HHHHHHHHHHHHHh--cCCceEEEEeccCCcHH-------HHHHHHhC-----CCCC-ceEEEEeCC-----------HH
Confidence 55666777766643 36789999999999986 55666543 1124 688999875 43
Q ss_pred HHHH---HHHhhCCCCCCCCceEEeecCCCc--ccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHH
Q 017514 112 FQKI---LRKQLGSASGAAGQCFFTGVPGSF--YGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVL 186 (370)
Q Consensus 112 ~~~~---~~~~~~~~~~~~~~~f~~~vpgSF--y~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~ 186 (370)
+-.. +..+.|-.- -.-|.-+=.-+. |..|-|.-.+ +.++. +.
T Consensus 173 Nv~~g~~li~~~gL~~---i~~f~~~dAfd~~~l~~l~p~P~l-------------------------~iVsG-----L~ 219 (311)
T PF12147_consen 173 NVEKGRALIAERGLED---IARFEQGDAFDRDSLAALDPAPTL-------------------------AIVSG-----LY 219 (311)
T ss_pred HHHHHHHHHHHcCCcc---ceEEEecCCCCHhHhhccCCCCCE-------------------------EEEec-----ch
Confidence 3222 122223210 113444411111 2222222111 12221 22
Q ss_pred HHHHHHHHHHH-HHHHHHHHHhhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCccc
Q 017514 187 TAYYEQFQRDF-SLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYT 265 (370)
Q Consensus 187 ~ay~~Q~~~D~-~~fL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ 265 (370)
+-|.+ .|+ .+=|+--+.-+.|||.|+.+.- + -.| -.+.+..+|...- +| -||.+
T Consensus 220 ElF~D---n~lv~~sl~gl~~al~pgG~lIyTgQ--P-wHP-------Qle~IAr~LtsHr-~g-----------~~WvM 274 (311)
T PF12147_consen 220 ELFPD---NDLVRRSLAGLARALEPGGYLIYTGQ--P-WHP-------QLEMIARVLTSHR-DG-----------KAWVM 274 (311)
T ss_pred hhCCc---HHHHHHHHHHHHHHhCCCcEEEEcCC--C-CCc-------chHHHHHHHhccc-CC-----------CceEE
Confidence 22221 222 2245666888999999988742 1 111 1356777775441 23 57765
Q ss_pred --CCHHHHHHHHHhcCceE
Q 017514 266 --PSPAEIKSEVIKEGSFT 282 (370)
Q Consensus 266 --~s~eE~~~~ie~~GsF~ 282 (370)
||..|+..+++.+| |+
T Consensus 275 RrRsq~EmD~Lv~~aG-F~ 292 (311)
T PF12147_consen 275 RRRSQAEMDQLVEAAG-FE 292 (311)
T ss_pred EecCHHHHHHHHHHcC-Cc
Confidence 79999999999999 64
|
It is found in association with PF00561 from PFAM. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. This domain belongs to the S-adenosyl-L-methionine-dependent methyltransferases superfamily. |
| >PRK14901 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=93.66 E-value=0.63 Score=47.81 Aligned_cols=28 Identities=14% Similarity=0.020 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHhhccCceEEEEeecc
Q 017514 194 QRDFSLFLKCRSEELVAEGRMVLTFLGR 221 (370)
Q Consensus 194 ~~D~~~fL~~Ra~EL~~GG~lvl~~~g~ 221 (370)
.+.-..+|..=++-|+|||+||.+.+..
T Consensus 360 ~~~Q~~iL~~a~~~lkpgG~lvystcsi 387 (434)
T PRK14901 360 APLQAELLESLAPLLKPGGTLVYATCTL 387 (434)
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEeCCC
Confidence 3444678888899999999999877654
|
|
| >PRK04457 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=93.65 E-value=0.47 Score=45.42 Aligned_cols=24 Identities=21% Similarity=0.386 Sum_probs=19.2
Q ss_pred HHHHHHHHhhccCceEEEEeeccC
Q 017514 199 LFLKCRSEELVAEGRMVLTFLGRK 222 (370)
Q Consensus 199 ~fL~~Ra~EL~~GG~lvl~~~g~~ 222 (370)
.|++.-.+-|+|||+++++..+++
T Consensus 158 efl~~~~~~L~pgGvlvin~~~~~ 181 (262)
T PRK04457 158 PFFDDCRNALSSDGIFVVNLWSRD 181 (262)
T ss_pred HHHHHHHHhcCCCcEEEEEcCCCc
Confidence 377777788999999999877543
|
|
| >TIGR01177 conserved hypothetical protein TIGR01177 | Back alignment and domain information |
|---|
Probab=93.10 E-value=1.1 Score=44.21 Aligned_cols=24 Identities=29% Similarity=0.219 Sum_probs=19.6
Q ss_pred HHHHHHHHHhhccCceEEEEeecc
Q 017514 198 SLFLKCRSEELVAEGRMVLTFLGR 221 (370)
Q Consensus 198 ~~fL~~Ra~EL~~GG~lvl~~~g~ 221 (370)
..+|+.=++-|+|||++++.++..
T Consensus 274 ~~~l~~~~r~Lk~gG~lv~~~~~~ 297 (329)
T TIGR01177 274 ERSLEEFHEVLKSEGWIVYAVPTR 297 (329)
T ss_pred HHHHHHHHHHccCCcEEEEEEcCC
Confidence 457777788999999999998754
|
This family is found exclusively in the Archaea. |
| >COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=92.95 E-value=0.56 Score=43.61 Aligned_cols=24 Identities=17% Similarity=0.325 Sum_probs=18.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHH
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIK 74 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~ 74 (370)
...+|+|+|||||.+|.. +++++.
T Consensus 72 ~g~~VLEIGtGsGY~aAv-la~l~~ 95 (209)
T COG2518 72 PGDRVLEIGTGSGYQAAV-LARLVG 95 (209)
T ss_pred CCCeEEEECCCchHHHHH-HHHHhC
Confidence 458999999999999874 444443
|
|
| >TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase | Back alignment and domain information |
|---|
Probab=92.67 E-value=0.85 Score=43.60 Aligned_cols=30 Identities=10% Similarity=0.067 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHhhccCceEEEEeeccC
Q 017514 193 FQRDFSLFLKCRSEELVAEGRMVLTFLGRK 222 (370)
Q Consensus 193 ~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~ 222 (370)
..+.-..+|+.=++-|+|||+|+.......
T Consensus 174 l~~~q~~iL~~a~~~lkpgG~lvYstcs~~ 203 (264)
T TIGR00446 174 ISALQKELIDSAFDALKPGGVLVYSTCSLE 203 (264)
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEEeCCCC
Confidence 334445688888899999999998876543
|
|
| >KOG1331 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.65 E-value=0.38 Score=46.65 Aligned_cols=135 Identities=18% Similarity=0.164 Sum_probs=82.8
Q ss_pred hhHhhhHHHHHHHHHhHHHHHHHHHhhcccCCCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCC
Q 017514 17 SYASNSLVQEKVISIAKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLND 96 (370)
Q Consensus 17 sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nD 96 (370)
-|.+.+..=...-....|++.+.+... +.-..+.|.|||.|.-. +.. |-..++-.|
T Consensus 17 IYd~ia~~fs~tr~~~Wp~v~qfl~~~-----~~gsv~~d~gCGngky~------------------~~~-p~~~~ig~D 72 (293)
T KOG1331|consen 17 IYDKIATHFSATRAAPWPMVRQFLDSQ-----PTGSVGLDVGCGNGKYL------------------GVN-PLCLIIGCD 72 (293)
T ss_pred HHHHhhhhccccccCccHHHHHHHhcc-----CCcceeeecccCCcccC------------------cCC-Ccceeeecc
Confidence 355555542333344567777776543 33578999999999542 223 447788888
Q ss_pred CCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceee
Q 017514 97 LPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIF 176 (370)
Q Consensus 97 lp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~ 176 (370)
+. +.++.. .+..|. ...++.-+ -.-.+++.|+|...|.+.+||||.--.
T Consensus 73 ~c-------~~l~~~-----ak~~~~----~~~~~ad~-----l~~p~~~~s~d~~lsiavihhlsT~~R---------- 121 (293)
T KOG1331|consen 73 LC-------TGLLGG-----AKRSGG----DNVCRADA-----LKLPFREESFDAALSIAVIHHLSTRER---------- 121 (293)
T ss_pred hh-------hhhccc-----cccCCC----ceeehhhh-----hcCCCCCCccccchhhhhhhhhhhHHH----------
Confidence 75 111111 111111 01233222 234568899999999999999987221
Q ss_pred ecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeccCCCCC
Q 017514 177 MASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDP 226 (370)
Q Consensus 177 ~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~~~~~ 226 (370)
+.. .|+.-.+.|+|||.+.+..-+.....+
T Consensus 122 -----R~~---------------~l~e~~r~lrpgg~~lvyvwa~~q~~~ 151 (293)
T KOG1331|consen 122 -----RER---------------ALEELLRVLRPGGNALVYVWALEQHQS 151 (293)
T ss_pred -----HHH---------------HHHHHHHHhcCCCceEEEEehhhccCc
Confidence 111 355567899999999999998876654
|
|
| >PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=92.54 E-value=0.97 Score=44.75 Aligned_cols=19 Identities=16% Similarity=0.440 Sum_probs=16.6
Q ss_pred ceEEEeecCCCCcchHHHH
Q 017514 51 KVAIADLGCSSGPNTLLVA 69 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~ 69 (370)
.-+|+|+|||+|.+++.+.
T Consensus 81 g~~VLDIG~GtG~~a~~LA 99 (322)
T PRK13943 81 GMRVLEIGGGTGYNAAVMS 99 (322)
T ss_pred CCEEEEEeCCccHHHHHHH
Confidence 4699999999999988766
|
|
| >PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2 | Back alignment and domain information |
|---|
Probab=91.99 E-value=0.37 Score=44.77 Aligned_cols=19 Identities=26% Similarity=0.410 Sum_probs=14.8
Q ss_pred ceEEEeecCCCCcchHHHH
Q 017514 51 KVAIADLGCSSGPNTLLVA 69 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~ 69 (370)
-.+++|+|||+|.+|.++.
T Consensus 73 g~~VLeIGtGsGY~aAlla 91 (209)
T PF01135_consen 73 GDRVLEIGTGSGYQAALLA 91 (209)
T ss_dssp T-EEEEES-TTSHHHHHHH
T ss_pred CCEEEEecCCCcHHHHHHH
Confidence 4799999999999988665
|
1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A .... |
| >PLN02672 methionine S-methyltransferase | Back alignment and domain information |
|---|
Probab=91.94 E-value=0.84 Score=52.00 Aligned_cols=24 Identities=17% Similarity=0.198 Sum_probs=19.5
Q ss_pred HHHHHHHHHhhccCceEEEEeecc
Q 017514 198 SLFLKCRSEELVAEGRMVLTFLGR 221 (370)
Q Consensus 198 ~~fL~~Ra~EL~~GG~lvl~~~g~ 221 (370)
.+++..-.+-|+|||.|++.+..+
T Consensus 258 r~i~~~a~~~L~pgG~l~lEiG~~ 281 (1082)
T PLN02672 258 ARAVEEGISVIKPMGIMIFNMGGR 281 (1082)
T ss_pred HHHHHHHHHhccCCCEEEEEECcc
Confidence 457777788999999999998643
|
|
| >TIGR00417 speE spermidine synthase | Back alignment and domain information |
|---|
Probab=91.37 E-value=0.98 Score=43.27 Aligned_cols=19 Identities=21% Similarity=0.274 Sum_probs=16.0
Q ss_pred HHHHHHHHhhccCceEEEE
Q 017514 199 LFLKCRSEELVAEGRMVLT 217 (370)
Q Consensus 199 ~fL~~Ra~EL~~GG~lvl~ 217 (370)
.|++.-++-|+|||++++.
T Consensus 167 ef~~~~~~~L~pgG~lv~~ 185 (270)
T TIGR00417 167 EFYELLKKALNEDGIFVAQ 185 (270)
T ss_pred HHHHHHHHHhCCCcEEEEc
Confidence 3677777889999999987
|
the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM. |
| >PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes | Back alignment and domain information |
|---|
Probab=90.99 E-value=8.4 Score=35.92 Aligned_cols=162 Identities=22% Similarity=0.245 Sum_probs=91.2
Q ss_pred HhHHHHHHHHHhhcccCCCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhH
Q 017514 31 IAKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLA 110 (370)
Q Consensus 31 ~~~~~l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~ 110 (370)
...|.|.+.+..+. .+..-+|++-|||.|...+.+. ++ | .+|+--|+. +
T Consensus 21 ~~~p~L~~~~~~l~---~~~~~rvLvPgCG~g~D~~~La--------~~----G-----~~VvGvDls-----------~ 69 (218)
T PF05724_consen 21 EPNPALVEYLDSLA---LKPGGRVLVPGCGKGYDMLWLA--------EQ----G-----HDVVGVDLS-----------P 69 (218)
T ss_dssp TSTHHHHHHHHHHT---TSTSEEEEETTTTTSCHHHHHH--------HT----T-----EEEEEEES------------H
T ss_pred CCCHHHHHHHHhcC---CCCCCeEEEeCCCChHHHHHHH--------HC----C-----CeEEEEecC-----------H
Confidence 35667777766532 2345799999999999977666 32 2 677777764 2
Q ss_pred HHHHHHHHhhCCC--CCCCCceE------EeecCCCcccccCCCC--ceeEEEeccccccccCCCCCccCCCceeeecCC
Q 017514 111 SFQKILRKQLGSA--SGAAGQCF------FTGVPGSFYGRLFPRN--SVHLFHSSYSLQWLSQVPDGLESNKGNIFMAST 180 (370)
Q Consensus 111 ~~~~~~~~~~~~~--~~~~~~~f------~~~vpgSFy~~l~p~~--sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~ 180 (370)
.--....++.+.. ........ +.-+-|+||. +-|.. ++|+++=.++|+=| |+
T Consensus 70 ~Ai~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~gDfF~-l~~~~~g~fD~iyDr~~l~Al---pp-------------- 131 (218)
T PF05724_consen 70 TAIEQAFEENNLEPTVTSVGGFKRYQAGRITIYCGDFFE-LPPEDVGKFDLIYDRTFLCAL---PP-------------- 131 (218)
T ss_dssp HHHHHHHHHCTTEEECTTCTTEEEETTSSEEEEES-TTT-GGGSCHHSEEEEEECSSTTTS----G--------------
T ss_pred HHHHHHHHHhccCCCcccccceeeecCCceEEEEccccc-CChhhcCCceEEEEecccccC---CH--------------
Confidence 2111111111110 00000111 1223348877 33333 48999999988763 43
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCC
Q 017514 181 SPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFN 260 (370)
Q Consensus 181 s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~ 260 (370)
+..++|++ .-++=|+|||++++..+-.+... ..
T Consensus 132 ---~~R~~Ya~-----------~l~~ll~p~g~~lLi~l~~~~~~---------------------------------~~ 164 (218)
T PF05724_consen 132 ---EMRERYAQ-----------QLASLLKPGGRGLLITLEYPQGE---------------------------------ME 164 (218)
T ss_dssp ---GGHHHHHH-----------HHHHCEEEEEEEEEEEEES-CSC---------------------------------SS
T ss_pred ---HHHHHHHH-----------HHHHHhCCCCcEEEEEEEcCCcC---------------------------------CC
Confidence 34566666 44688999999666555322110 11
Q ss_pred cCcccCCHHHHHHHHHhcCceEEEEEEEEe
Q 017514 261 IPQYTPSPAEIKSEVIKEGSFTIDHLEVSE 290 (370)
Q Consensus 261 ~P~y~~s~eE~~~~ie~~GsF~i~~le~~~ 290 (370)
-|=|.-+.+||++.+. .+ |+|+.++..+
T Consensus 165 GPPf~v~~~ev~~l~~-~~-f~i~~l~~~~ 192 (218)
T PF05724_consen 165 GPPFSVTEEEVRELFG-PG-FEIEELEEED 192 (218)
T ss_dssp SSS----HHHHHHHHT-TT-EEEEEEEEEE
T ss_pred CcCCCCCHHHHHHHhc-CC-cEEEEEeccc
Confidence 3556678999999999 44 9999999854
|
Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B. |
| >KOG3191 consensus Predicted N6-DNA-methyltransferase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=90.59 E-value=4.8 Score=36.89 Aligned_cols=143 Identities=15% Similarity=0.131 Sum_probs=85.7
Q ss_pred hHHHHHHHHHhhcccCCCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHH
Q 017514 32 AKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLAS 111 (370)
Q Consensus 32 ~~~~l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~ 111 (370)
+++.||+...++... .+.-.+|+|||||--|-.+.+.+. |...++..|+- |.
T Consensus 28 LlDaLekd~~eL~~~---~~~i~lEIG~GSGvvstfL~~~i~--------------~~~~~latDiN-----------p~ 79 (209)
T KOG3191|consen 28 LLDALEKDAAELKGH---NPEICLEIGCGSGVVSTFLASVIG--------------PQALYLATDIN-----------PE 79 (209)
T ss_pred HHHHHHHHHHHHhhc---CceeEEEecCCcchHHHHHHHhcC--------------CCceEEEecCC-----------HH
Confidence 567777777766432 267789999999977666653322 34777888874 33
Q ss_pred HHHHHHHhhCCCCCCCCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHH-
Q 017514 112 FQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYY- 190 (370)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~- 190 (370)
-...-+..... +.+-+--|--|+..-|-+ +|+|+..= .|+.+....+.|- ......||+
T Consensus 80 A~~~Tl~TA~~-----n~~~~~~V~tdl~~~l~~-~~VDvLvf---------NPPYVpt~~~~i~-----~~~i~~a~aG 139 (209)
T KOG3191|consen 80 ALEATLETARC-----NRVHIDVVRTDLLSGLRN-ESVDVLVF---------NPPYVPTSDEEIG-----DEGIASAWAG 139 (209)
T ss_pred HHHHHHHHHHh-----cCCccceeehhHHhhhcc-CCccEEEE---------CCCcCcCCcccch-----hHHHHHHHhc
Confidence 22221111000 112233355577666667 88887542 3665553222221 123445565
Q ss_pred -HHHHHHHHHHHHHHHHhhccCceEEEEeeccC
Q 017514 191 -EQFQRDFSLFLKCRSEELVAEGRMVLTFLGRK 222 (370)
Q Consensus 191 -~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~ 222 (370)
+--++=..+||..--.-|.|-|.+.+...-++
T Consensus 140 G~~Gr~v~d~ll~~v~~iLSp~Gv~Ylv~~~~N 172 (209)
T KOG3191|consen 140 GKDGREVTDRLLPQVPDILSPRGVFYLVALRAN 172 (209)
T ss_pred CcchHHHHHHHHhhhhhhcCcCceEEeeehhhc
Confidence 44555577888888888999999999887654
|
|
| >KOG1499 consensus Protein arginine N-methyltransferase PRMT1 and related enzymes [Posttranslational modification, protein turnover, chaperones; Transcription; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=90.28 E-value=0.74 Score=45.82 Aligned_cols=105 Identities=21% Similarity=0.313 Sum_probs=67.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
+.-+|+|.|||+|-.|+... +. |. -.|+.-| ++.+. ....++.+.++- .
T Consensus 60 ~dK~VlDVGcGtGILS~F~a--------kA----GA----~~V~aVe-----~S~ia----~~a~~iv~~N~~------~ 108 (346)
T KOG1499|consen 60 KDKTVLDVGCGTGILSMFAA--------KA----GA----RKVYAVE-----ASSIA----DFARKIVKDNGL------E 108 (346)
T ss_pred CCCEEEEcCCCccHHHHHHH--------Hh----Cc----ceEEEEe-----chHHH----HHHHHHHHhcCc------c
Confidence 45789999999999998777 32 31 2333332 23333 222333332232 1
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
--+--+.|.-.+-.+|...||+++|=|-=+||-. +.=|...|-+|-+=|+
T Consensus 109 ~ii~vi~gkvEdi~LP~eKVDiIvSEWMGy~Ll~------------------------------EsMldsVl~ARdkwL~ 158 (346)
T KOG1499|consen 109 DVITVIKGKVEDIELPVEKVDIIVSEWMGYFLLY------------------------------ESMLDSVLYARDKWLK 158 (346)
T ss_pred ceEEEeecceEEEecCccceeEEeehhhhHHHHH------------------------------hhhhhhhhhhhhhccC
Confidence 2344466677677778899999999887777543 2234457889999999
Q ss_pred cCceEE
Q 017514 210 AEGRMV 215 (370)
Q Consensus 210 ~GG~lv 215 (370)
|||.++
T Consensus 159 ~~G~i~ 164 (346)
T KOG1499|consen 159 EGGLIY 164 (346)
T ss_pred CCceEc
Confidence 999985
|
|
| >PF10294 Methyltransf_16: Putative methyltransferase; InterPro: IPR019410 There are a number of unidentified genes that have a high probability of coding for methyltransferases | Back alignment and domain information |
|---|
Probab=90.17 E-value=0.72 Score=41.26 Aligned_cols=114 Identities=18% Similarity=0.196 Sum_probs=54.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
...+|+|+|||+|--++.+... . ..-.|+++|++. +...+..+-. .++... ...
T Consensus 45 ~~~~VLELGaG~Gl~gi~~a~~--------~-------~~~~Vv~TD~~~-----~l~~l~~Ni~----~N~~~~--~~~ 98 (173)
T PF10294_consen 45 RGKRVLELGAGTGLPGIAAAKL--------F-------GAARVVLTDYNE-----VLELLRRNIE----LNGSLL--DGR 98 (173)
T ss_dssp TTSEEEETT-TTSHHHHHHHHT----------------T-SEEEEEE-S------HHHHHHHHHH----TT---------
T ss_pred CCceEEEECCccchhHHHHHhc--------c-------CCceEEEeccch-----hhHHHHHHHH----hccccc--ccc
Confidence 4579999999999888766621 1 237899999873 3333332211 111000 012
Q ss_pred eEEee--cCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017514 130 CFFTG--VPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (370)
Q Consensus 130 ~f~~~--vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~E 207 (370)
+-+.. .+.......+.++++|+++.+=++.+ + +.+..+++.-..=
T Consensus 99 v~v~~L~Wg~~~~~~~~~~~~~D~IlasDv~Y~----~-----------------------------~~~~~L~~tl~~l 145 (173)
T PF10294_consen 99 VSVRPLDWGDELDSDLLEPHSFDVILASDVLYD----E-----------------------------ELFEPLVRTLKRL 145 (173)
T ss_dssp -EEEE--TTS-HHHHHHS-SSBSEEEEES--S-----G-----------------------------GGHHHHHHHHHHH
T ss_pred ccCcEEEecCcccccccccccCCEEEEecccch----H-----------------------------HHHHHHHHHHHHH
Confidence 22221 22222233345566777776666654 1 1222355556778
Q ss_pred hccCceEEEEeeccC
Q 017514 208 LVAEGRMVLTFLGRK 222 (370)
Q Consensus 208 L~~GG~lvl~~~g~~ 222 (370)
|.++|.+++...-|.
T Consensus 146 l~~~~~vl~~~~~R~ 160 (173)
T PF10294_consen 146 LKPNGKVLLAYKRRR 160 (173)
T ss_dssp BTT-TTEEEEEE-S-
T ss_pred hCCCCEEEEEeCEec
Confidence 899999777776663
|
They make up approximately 0.6-1.6% of the genes in the yeast, human, mouse, Drosophila melanogaster, Caenorhabditis elegans, Arabidopsis thaliana, and Escherichia coli genomes []. This entry represents putative nicotinamide N-methyltransferases involved in rDNA silencing and in lifespan determination. ; PDB: 3BZB_A. |
| >PHA03412 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=90.08 E-value=2.1 Score=40.67 Aligned_cols=36 Identities=11% Similarity=0.112 Sum_probs=24.4
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLP 98 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp 98 (370)
..+|+|+|||+|..++.+. ++.. ..+..+|+.-|+-
T Consensus 50 ~grVLDlG~GSG~Lalala--------~~~~----~~~~~~V~aVEID 85 (241)
T PHA03412 50 SGSVVDLCAGIGGLSFAMV--------HMMM----YAKPREIVCVELN 85 (241)
T ss_pred CCEEEEccChHHHHHHHHH--------Hhcc----cCCCcEEEEEECC
Confidence 4699999999998877655 2210 1124678877874
|
|
| >PRK03612 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=89.61 E-value=2.6 Score=44.43 Aligned_cols=21 Identities=19% Similarity=0.086 Sum_probs=16.4
Q ss_pred CCceEEEeecCCCCcchHHHH
Q 017514 49 PTKVAIADLGCSSGPNTLLVA 69 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~ 69 (370)
+++-+|+|+|||+|..+..++
T Consensus 296 ~~~~rVL~IG~G~G~~~~~ll 316 (521)
T PRK03612 296 ARPRRVLVLGGGDGLALREVL 316 (521)
T ss_pred CCCCeEEEEcCCccHHHHHHH
Confidence 456799999999998665444
|
|
| >PLN02366 spermidine synthase | Back alignment and domain information |
|---|
Probab=89.28 E-value=2.3 Score=41.83 Aligned_cols=21 Identities=14% Similarity=0.153 Sum_probs=16.1
Q ss_pred CCCceEEEeecCCCCcchHHH
Q 017514 48 SPTKVAIADLGCSSGPNTLLV 68 (370)
Q Consensus 48 ~~~~~~IaD~Gcs~G~Ns~~~ 68 (370)
.+++-+|+++|||.|.....+
T Consensus 89 ~~~pkrVLiIGgG~G~~~rel 109 (308)
T PLN02366 89 IPNPKKVLVVGGGDGGVLREI 109 (308)
T ss_pred CCCCCeEEEEcCCccHHHHHH
Confidence 356789999999999864433
|
|
| >KOG1975 consensus mRNA cap methyltransferase [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=88.85 E-value=1.6 Score=43.29 Aligned_cols=60 Identities=13% Similarity=0.260 Sum_probs=41.5
Q ss_pred eEEeecCCCcccccC-----CCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017514 130 CFFTGVPGSFYGRLF-----PRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCR 204 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~-----p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~R 204 (370)
.|++| -+|+++|. ++-++|++=|=+|+|+-=. +. +-...+|+.-
T Consensus 175 ~f~~~--Dc~~~~l~d~~e~~dp~fDivScQF~~HYaFe-----------------te------------e~ar~~l~Nv 223 (389)
T KOG1975|consen 175 VFIAA--DCFKERLMDLLEFKDPRFDIVSCQFAFHYAFE-----------------TE------------ESARIALRNV 223 (389)
T ss_pred EEEEe--ccchhHHHHhccCCCCCcceeeeeeeEeeeec-----------------cH------------HHHHHHHHHH
Confidence 45444 56665542 3445999999999998221 11 1123478889
Q ss_pred HHhhccCceEEEEeec
Q 017514 205 SEELVAEGRMVLTFLG 220 (370)
Q Consensus 205 a~EL~~GG~lvl~~~g 220 (370)
++-|+|||.|+-+++.
T Consensus 224 a~~LkpGG~FIgTiPd 239 (389)
T KOG1975|consen 224 AKCLKPGGVFIGTIPD 239 (389)
T ss_pred HhhcCCCcEEEEecCc
Confidence 9999999999999874
|
|
| >PRK00274 ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein; Reviewed | Back alignment and domain information |
|---|
Probab=88.03 E-value=0.66 Score=44.56 Aligned_cols=20 Identities=15% Similarity=0.119 Sum_probs=17.6
Q ss_pred ceEEEeecCCCCcchHHHHH
Q 017514 51 KVAIADLGCSSGPNTLLVAS 70 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~ 70 (370)
.-+|+|+|||+|..|..+..
T Consensus 43 ~~~VLEiG~G~G~lt~~L~~ 62 (272)
T PRK00274 43 GDNVLEIGPGLGALTEPLLE 62 (272)
T ss_pred cCeEEEeCCCccHHHHHHHH
Confidence 46899999999999998875
|
|
| >PRK13256 thiopurine S-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=87.57 E-value=12 Score=35.31 Aligned_cols=35 Identities=11% Similarity=0.075 Sum_probs=24.5
Q ss_pred hHHHHHHHHHhhcccCCCCceEEEeecCCCCcchHHHH
Q 017514 32 AKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVA 69 (370)
Q Consensus 32 ~~~~l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~ 69 (370)
.-|.|.+.+..+.. +..-||++.|||.|.+...+.
T Consensus 28 pnp~L~~~~~~l~~---~~~~rvLvPgCGkg~D~~~LA 62 (226)
T PRK13256 28 PNEFLVKHFSKLNI---NDSSVCLIPMCGCSIDMLFFL 62 (226)
T ss_pred CCHHHHHHHHhcCC---CCCCeEEEeCCCChHHHHHHH
Confidence 34556555554332 234699999999999988777
|
|
| >smart00650 rADc Ribosomal RNA adenine dimethylases | Back alignment and domain information |
|---|
Probab=87.20 E-value=2.1 Score=37.68 Aligned_cols=19 Identities=16% Similarity=0.167 Sum_probs=16.7
Q ss_pred ceEEEeecCCCCcchHHHH
Q 017514 51 KVAIADLGCSSGPNTLLVA 69 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~ 69 (370)
.-+|+|+|||+|..|..++
T Consensus 14 ~~~vLEiG~G~G~lt~~l~ 32 (169)
T smart00650 14 GDTVLEIGPGKGALTEELL 32 (169)
T ss_pred cCEEEEECCCccHHHHHHH
Confidence 3589999999999998776
|
|
| >PF01234 NNMT_PNMT_TEMT: NNMT/PNMT/TEMT family; InterPro: IPR000940 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=87.15 E-value=1 Score=43.18 Aligned_cols=82 Identities=22% Similarity=0.261 Sum_probs=56.3
Q ss_pred CceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeccCCCCC
Q 017514 147 NSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDP 226 (370)
Q Consensus 147 ~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~~~~~ 226 (370)
...|.+.|++||.=.++-+ +.|. +=|+.-+.-|||||.|++...-..+.
T Consensus 157 ~~~D~v~s~fcLE~a~~d~---------------------~~y~--------~al~ni~~lLkpGG~Lil~~~l~~t~-- 205 (256)
T PF01234_consen 157 PKFDCVISSFCLESACKDL---------------------DEYR--------RALRNISSLLKPGGHLILAGVLGSTY-- 205 (256)
T ss_dssp SSEEEEEEESSHHHH-SSH---------------------HHHH--------HHHHHHHTTEEEEEEEEEEEESS-SE--
T ss_pred cchhhhhhhHHHHHHcCCH---------------------HHHH--------HHHHHHHHHcCCCcEEEEEEEcCcee--
Confidence 3599999999998866632 2233 35667788999999999988743321
Q ss_pred CCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEE
Q 017514 227 SSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLE 287 (370)
Q Consensus 227 ~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le 287 (370)
+ || | .-.+|.+.-+.+.++++|+++| |.|+..+
T Consensus 206 Y-----------------~v--G--------~~~F~~l~l~ee~v~~al~~aG-~~i~~~~ 238 (256)
T PF01234_consen 206 Y-----------------MV--G--------GHKFPCLPLNEEFVREALEEAG-FDIEDLE 238 (256)
T ss_dssp E-----------------EE--T--------TEEEE---B-HHHHHHHHHHTT-EEEEEEE
T ss_pred E-----------------EE--C--------CEecccccCCHHHHHHHHHHcC-CEEEecc
Confidence 1 11 1 1237888899999999999999 9998888
|
The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. Several cytoplasmic vertebrate methyltransferases are evolutionary related [], including nicotinamide N-methyltransferase (2.1.1.1 from EC) (NNMT); phenylethanolamine N-methyltransferase (2.1.1.28 from EC) (PNMT); and thioether S-methyltransferase (2.1.1.96 from EC) (TEMT). NNMT catalyzes the N-methylation of nicotinamide and other pyridines to form pyridinium ions. This activity is important for the biotransformation of many drugs and xenobiotic compounds. PNMT catalyzes the last step in catecholamine biosynthesis, the conversion of noradrenalin to adrenalin; and TEMT catalyzes the methylation of dimethyl sulphide into trimethylsulphonium. These three enzymes use S-adenosyl-L-methionine as the methyl donor. They are proteins of 30 to 32 kDa.; GO: 0008168 methyltransferase activity; PDB: 2IIP_C 3ROD_A 2OBF_A 3HCA_B 2ONY_B 3KR1_A 2OPB_B 3KQP_B 2AN4_B 3KQM_A .... |
| >PLN02781 Probable caffeoyl-CoA O-methyltransferase | Back alignment and domain information |
|---|
Probab=85.13 E-value=4.2 Score=38.18 Aligned_cols=35 Identities=14% Similarity=0.105 Sum_probs=25.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLP 98 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp 98 (370)
++-+|+|+||++|.-++.+. ... ++.-+|+.-|..
T Consensus 68 ~~~~vLEiGt~~G~s~l~la--------~~~------~~~g~v~tiD~d 102 (234)
T PLN02781 68 NAKNTLEIGVFTGYSLLTTA--------LAL------PEDGRITAIDID 102 (234)
T ss_pred CCCEEEEecCcccHHHHHHH--------HhC------CCCCEEEEEECC
Confidence 46799999999999888665 221 134678887775
|
|
| >PRK01581 speE spermidine synthase; Validated | Back alignment and domain information |
|---|
Probab=84.90 E-value=6.4 Score=39.79 Aligned_cols=19 Identities=16% Similarity=0.169 Sum_probs=15.6
Q ss_pred HHHHHHHHhhccCceEEEE
Q 017514 199 LFLKCRSEELVAEGRMVLT 217 (370)
Q Consensus 199 ~fL~~Ra~EL~~GG~lvl~ 217 (370)
.|++.-.+-|+|||+|++.
T Consensus 249 EFy~~~~~~LkPgGV~V~Q 267 (374)
T PRK01581 249 ELFARIATFLTEDGAFVCQ 267 (374)
T ss_pred HHHHHHHHhcCCCcEEEEe
Confidence 3667777889999999887
|
|
| >PRK10611 chemotaxis methyltransferase CheR; Provisional | Back alignment and domain information |
|---|
Probab=84.35 E-value=2.5 Score=41.27 Aligned_cols=42 Identities=17% Similarity=0.292 Sum_probs=25.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLP 98 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp 98 (370)
+++||-.-|||+|-=.-.+.--+.+.+. ...-.++|+-.|+-
T Consensus 115 ~~irIWSAgCStGEEpYSlAmll~e~~~-------~~~~~~~I~atDIs 156 (287)
T PRK10611 115 GEYRVWSAAASTGEEPYSIAMTLADTLG-------TAPGRWKVFASDID 156 (287)
T ss_pred CCEEEEEccccCCHHHHHHHHHHHHhhc-------ccCCCcEEEEEECC
Confidence 4699999999999433222211222221 11125899999985
|
|
| >PF01739 CheR: CheR methyltransferase, SAM binding domain; InterPro: IPR022642 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=84.33 E-value=11 Score=34.54 Aligned_cols=44 Identities=23% Similarity=0.427 Sum_probs=23.2
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLP 98 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp 98 (370)
.+++||-..|||+|-=.-.+.--+-+... +...-.++++-+|+-
T Consensus 30 ~~~lrIWSagCStGeE~YSlAmll~e~~~------~~~~~~~~I~atDi~ 73 (196)
T PF01739_consen 30 GRPLRIWSAGCSTGEEPYSLAMLLLELLP------GALGWDFRILATDIS 73 (196)
T ss_dssp -S-EEEEETT-TTTHHHHHHHHHHHHHH-------S-TT-SEEEEEEES-
T ss_pred CCCeEEEECCCCCChhHHHHHHHHHHHhc------ccCCCceEEEEEECC
Confidence 46899999999999543322211222111 111225999999984
|
The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. Flagellated bacteria swim towards favourable chemicals and away from deleterious ones. Sensing of chemoeffector gradients involves chemotaxis receptors, transmembrane (TM) proteins that detect stimuli through their periplasmic domains and transduce the signals via their cytoplasmic domains []. Signalling outputs from these receptors are influenced both by the binding of the chemoeffector ligand to their periplasmic domains and by methylation of specific glutamate residues on their cytoplasmic domains. Methylation is catalysed by CheR, an S-adenosylmethionine-dependent methyltransferase [], which reversibly methylates specific glutamate residues within a coiled coil region, to form gamma-glutamyl methyl ester residues [, ]. The structure of the Salmonella typhimurium chemotaxis receptor methyltransferase CheR, bound to S-adenosylhomocysteine, has been determined to a resolution of 2.0 A []. The structure reveals CheR to be a two-domain protein, with a smaller N-terminal helical domain linked via a single polypeptide connection to a larger C-terminal alpha/beta domain. The C-terminal domain has the characteristics of a nucleotide-binding fold, with an insertion of a small anti-parallel beta-sheet subdomain. The S-adenosylhomocysteine-binding site is formed mainly by the large domain, with contributions from residues within the N-terminal domain and the linker region []. CheR proteins are part of the chemotaxis signaling mechanism which methylates the chemotaxis receptor at specific glutamate residues. This entry refers to the C-terminal SAM-binding domain of the CherR-type MCP methyltransferases, which are found in bacteria, archaea and green plants. This entry is found in association with PF03705 from PFAM. ; PDB: 1AF7_A 1BC5_A. |
| >PRK15128 23S rRNA m(5)C1962 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=83.99 E-value=14 Score=37.71 Aligned_cols=27 Identities=11% Similarity=-0.057 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHhhccCceEEEEee
Q 017514 193 FQRDFSLFLKCRSEELVAEGRMVLTFL 219 (370)
Q Consensus 193 ~~~D~~~fL~~Ra~EL~~GG~lvl~~~ 219 (370)
..+++..++..=.+=|+|||.+++...
T Consensus 314 ~~~~y~~l~~~a~~lLk~gG~lv~~sc 340 (396)
T PRK15128 314 ACRGYKDINMLAIQLLNPGGILLTFSC 340 (396)
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 455677777777788999999987653
|
|
| >COG1352 CheR Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=83.80 E-value=27 Score=33.78 Aligned_cols=43 Identities=19% Similarity=0.298 Sum_probs=28.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLP 98 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp 98 (370)
+++||--.|||+|-=.-.+.-.+.+.... ..+..++|+.+|+-
T Consensus 96 ~~irIWSaaCStGEEpYSiAm~l~e~~~~------~~~~~~~I~AtDId 138 (268)
T COG1352 96 RPIRIWSAACSTGEEPYSLAMLLLEALGK------LAGFRVKILATDID 138 (268)
T ss_pred CceEEEecCcCCCccHHHHHHHHHHHhcc------ccCCceEEEEEECC
Confidence 68999999999996544333333333321 12335999999984
|
|
| >PF13679 Methyltransf_32: Methyltransferase domain | Back alignment and domain information |
|---|
Probab=82.79 E-value=2 Score=36.95 Aligned_cols=38 Identities=16% Similarity=0.177 Sum_probs=26.2
Q ss_pred HHhHHHHHHHHHhhcccCCCCceEEEeecCCCCcchHHHH
Q 017514 30 SIAKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVA 69 (370)
Q Consensus 30 ~~~~~~l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~ 69 (370)
+.+..++...++... ....+.+|+|+|||.|..|+.+.
T Consensus 7 ~~~~~~i~~~~~~~~--~~~~~~~vvD~GsG~GyLs~~La 44 (141)
T PF13679_consen 7 ERMAELIDSLCDSVG--ESKRCITVVDLGSGKGYLSRALA 44 (141)
T ss_pred HHHHHHHHHHHHHhh--ccCCCCEEEEeCCChhHHHHHHH
Confidence 344555555554331 23467999999999999999777
|
|
| >COG0220 Predicted S-adenosylmethionine-dependent methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=82.12 E-value=7 Score=36.80 Aligned_cols=146 Identities=16% Similarity=0.174 Sum_probs=79.4
Q ss_pred hhhHHHHHHHHHhHHHHHHHHHhhcc---cCCCC--ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEe
Q 017514 20 SNSLVQEKVISIAKPITEEAMTKLFC---STSPT--KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFL 94 (370)
Q Consensus 20 ~nS~~Q~~~~~~~~~~l~~ai~~~~~---~~~~~--~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~ 94 (370)
+....|+..+..-.|.+-.--..... ...+. .-.++|+|||.|.-.+... ++ .|+.-++-
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~pi~lEIGfG~G~~l~~~A--------~~-------nP~~nfiG 77 (227)
T COG0220 13 RLTKAQKNALEDNWPRLGLDPQEEPGDWSALFGNNNAPIVLEIGFGMGEFLVEMA--------KK-------NPEKNFLG 77 (227)
T ss_pred cccHHHHHHHHhcccccCCChhhccchHHHHhCCCCCcEEEEECCCCCHHHHHHH--------HH-------CCCCCEEE
Confidence 45566666665544433222111000 00122 2589999999998766444 32 25555555
Q ss_pred CCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCceEEeec-CCCcccccCCCCceeEEEeccccccccCCCCCccCCCc
Q 017514 95 NDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGV-PGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKG 173 (370)
Q Consensus 95 nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~f~~~v-pgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~ 173 (370)
-+.- .+.+-+.+.. . .+.+. .++.+.=. ..-+...++|++|||=++=++.=-| |+.-- +|.
T Consensus 78 iEi~---~~~v~~~l~k----~-~~~~l-----~Nlri~~~DA~~~l~~~~~~~sl~~I~i~FPDPW----pKkRH-~KR 139 (227)
T COG0220 78 IEIR---VPGVAKALKK----I-KELGL-----KNLRLLCGDAVEVLDYLIPDGSLDKIYINFPDPW----PKKRH-HKR 139 (227)
T ss_pred EEEe---hHHHHHHHHH----H-HHcCC-----CcEEEEcCCHHHHHHhcCCCCCeeEEEEECCCCC----CCccc-ccc
Confidence 5543 1222222221 1 11122 13333321 1234466778889999999988888 54211 444
Q ss_pred eeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEe
Q 017514 174 NIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTF 218 (370)
Q Consensus 174 ~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~ 218 (370)
+|- .+ .||+.=++-|+|||.+.+..
T Consensus 140 Rl~----~~----------------~fl~~~a~~Lk~gG~l~~aT 164 (227)
T COG0220 140 RLT----QP----------------EFLKLYARKLKPGGVLHFAT 164 (227)
T ss_pred ccC----CH----------------HHHHHHHHHccCCCEEEEEe
Confidence 442 22 28888899999999998875
|
|
| >PRK11783 rlmL 23S rRNA m(2)G2445 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=81.63 E-value=8 Score=42.35 Aligned_cols=116 Identities=14% Similarity=0.128 Sum_probs=61.5
Q ss_pred eEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhh-CCCCCCCCce
Q 017514 52 VAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAAGQC 130 (370)
Q Consensus 52 ~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~-~~~~~~~~~~ 130 (370)
-+|+|+||++|..|+.+. .. | .-+|+.-|+- +...+..++.. .+++...+--
T Consensus 540 ~rVLDlf~gtG~~sl~aa--------~~----G----a~~V~~vD~s-----------~~al~~a~~N~~~ng~~~~~v~ 592 (702)
T PRK11783 540 KDFLNLFAYTGTASVHAA--------LG----G----AKSTTTVDMS-----------NTYLEWAERNFALNGLSGRQHR 592 (702)
T ss_pred CeEEEcCCCCCHHHHHHH--------HC----C----CCEEEEEeCC-----------HHHHHHHHHHHHHhCCCccceE
Confidence 589999999999998766 21 1 1357778875 22222111111 0111000123
Q ss_pred EEeecCCCcccccC-CCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 131 FFTGVPGSFYGRLF-PRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 131 f~~~vpgSFy~~l~-p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
|+.+ +.++-+- ..+++|++++. |+.....+. ...+ ....+|+..++..=.+-|+
T Consensus 593 ~i~~---D~~~~l~~~~~~fDlIilD---------PP~f~~~~~--------~~~~-----~~~~~~y~~l~~~a~~lL~ 647 (702)
T PRK11783 593 LIQA---DCLAWLKEAREQFDLIFID---------PPTFSNSKR--------MEDS-----FDVQRDHVALIKDAKRLLR 647 (702)
T ss_pred EEEc---cHHHHHHHcCCCcCEEEEC---------CCCCCCCCc--------cchh-----hhHHHHHHHHHHHHHHHcC
Confidence 4333 5433110 15678988875 554332110 0011 1234566667777678899
Q ss_pred cCceEEEEee
Q 017514 210 AEGRMVLTFL 219 (370)
Q Consensus 210 ~GG~lvl~~~ 219 (370)
|||.+++...
T Consensus 648 ~gG~l~~~~~ 657 (702)
T PRK11783 648 PGGTLYFSNN 657 (702)
T ss_pred CCCEEEEEeC
Confidence 9999887653
|
|
| >KOG2899 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=80.97 E-value=9.7 Score=36.51 Aligned_cols=23 Identities=22% Similarity=0.278 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHhhccCceEEEE
Q 017514 195 RDFSLFLKCRSEELVAEGRMVLT 217 (370)
Q Consensus 195 ~D~~~fL~~Ra~EL~~GG~lvl~ 217 (370)
+.+.+||+.-++-|.|||+||+.
T Consensus 186 ~GL~~ff~kis~ll~pgGiLvvE 208 (288)
T KOG2899|consen 186 DGLRRFFRKISSLLHPGGILVVE 208 (288)
T ss_pred HHHHHHHHHHHHhhCcCcEEEEc
Confidence 46888999999999999999984
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 370 | ||||
| 1m6e_X | 359 | Crystal Structure Of Salicylic Acid Carboxyl Methyl | 1e-131 | ||
| 2eg5_A | 372 | The Structure Of Xanthosine Methyltransferase Lengt | 2e-74 | ||
| 2efj_A | 384 | The Structure Of 1,7 Dimethylxanthine Methyltransfe | 3e-70 | ||
| 3b5i_A | 374 | Crystal Structure Of Indole-3-Acetic Acid Methyltra | 1e-53 |
| >pdb|1M6E|X Chain X, Crystal Structure Of Salicylic Acid Carboxyl Methyltransferase (Samt) Length = 359 | Back alignment and structure |
|
| >pdb|2EG5|A Chain A, The Structure Of Xanthosine Methyltransferase Length = 372 | Back alignment and structure |
|
| >pdb|2EFJ|A Chain A, The Structure Of 1,7 Dimethylxanthine Methyltransferase Length = 384 | Back alignment and structure |
|
| >pdb|3B5I|A Chain A, Crystal Structure Of Indole-3-Acetic Acid Methyltransferase Length = 374 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35 Length = 359 | Back alignment and structure |
|---|
Score = 423 bits (1088), Expect = e-148
Identities = 223/370 (60%), Positives = 276/370 (74%), Gaps = 16/370 (4%)
Query: 1 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTS-PTKVAIADLGC 59
M+V QVLHM GG G SYA NS +Q +VISI KPITE A+T L+ + T++AIADLGC
Sbjct: 1 MDVRQVLHMKGGAGENSYAMNSFIQRQVISITKPITEAAITALYSGDTVTTRLAIADLGC 60
Query: 60 SSGPNTLLVASELIKVVNKICDKLGSQL-PEFQVFLNDLPGNDFNTIFRSLASFQKILRK 118
SSGPN L +ELIK V ++ K+G + PE+Q+FLNDLPGNDFN IFRSL
Sbjct: 61 SSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEND---- 116
Query: 119 QLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMA 178
G CF GVPGSFYGRLFPRN++H HSSYSL WLSQVP G+ESNKGNI+MA
Sbjct: 117 -------VDGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMA 169
Query: 179 STSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELL 238
+T P VL AYY+QFQ D +LFL+CR++E+V GRMVLT LGR+S+D +S ECC IW+LL
Sbjct: 170 NTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRASTECCLIWQLL 229
Query: 239 ATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQN 298
A ALN MVSEGLIEEEK++ FNIPQYTPSP E+++E++KEGSF IDH+E SE+ W++
Sbjct: 230 AMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCTK 289
Query: 299 GFKFNEAVDAFNDGGYNVANCMRAVAEPLLVSQFGEAIIDELFKRYREIVADRMSKEKTK 358
+ + + GYNVA CMRAVAEPLL+ FGEAII+++F RY+ ++ +RMSKEKTK
Sbjct: 290 ---DGDGGGSVEEEGYNVARCMRAVAEPLLLDHFGEAIIEDVFHRYKLLIIERMSKEKTK 346
Query: 359 FINVTVSLTK 368
FINV VSL +
Sbjct: 347 FINVIVSLIR 356
|
| >3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana} Length = 374 | Back alignment and structure |
|---|
Score = 415 bits (1067), Expect = e-145
Identities = 131/380 (34%), Positives = 185/380 (48%), Gaps = 19/380 (5%)
Query: 1 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLF--CSTSPTKVAIADLG 58
M++ ++L M GG G SYA+NSL Q + EE + + S SP DLG
Sbjct: 1 MKLERLLSMKGGKGQDSYANNSLAQAMHARSMLHLLEETLENVHLNSSASPPPFTAVDLG 60
Query: 59 CSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK 118
CSSG NT+ + ++K ++K D G PEF F +DLP NDFNT+F+ L
Sbjct: 61 CSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCM 120
Query: 119 QLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLES------NK 172
+ A+ F GVPGSFY RLFP ++ FHS++SL WLSQVP+ + N+
Sbjct: 121 EECLAADGNRSYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNR 180
Query: 173 GNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECC 232
G +F+ TAY QFQ D + FL+ R+ E+ G M L LGR S DP+ +
Sbjct: 181 GRVFIHGAGEK-TTTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRTSVDPTDQGGA 239
Query: 233 Y--IWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSE 290
A +++V EGL+ EK + FNIP Y PS + K V GSF ID L V +
Sbjct: 240 GLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAIDKLVVYK 299
Query: 291 VNWNAYQNGFKFNEAVDAFNDGGYNVANCMRAVAEPLLVSQFGEAIIDELFKRYREIVAD 350
N D ++ G A+ R+VA L+ + GE + ++LF R
Sbjct: 300 GGSPLVVNEP------DDASEVGRAFASSCRSVAGVLVEAHIGEELSNKLFSRVESRATS 353
Query: 351 RMSK--EKTKFINVTVSLTK 368
+F ++ SL+
Sbjct: 354 HAKDVLVNLQFFHIVASLSF 373
|
| >2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A* Length = 384 | Back alignment and structure |
|---|
Score = 403 bits (1035), Expect = e-140
Identities = 147/385 (38%), Positives = 219/385 (56%), Gaps = 25/385 (6%)
Query: 1 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSP---TKVAIADL 57
ME+ +VLHMNGG G TSYA NS +I KP+ E+ + +L + P + DL
Sbjct: 1 MELQEVLHMNGGEGDTSYAKNSSYNLFLIR-VKPVLEQCIQELLRANLPNINKCFKVGDL 59
Query: 58 GCSSGPNTLLVASELIKVVNKICDKL--GSQLPEFQVFLNDLPGNDFNTIFRSLASFQKI 115
GC+SGPNT ++++ ++K+ + + P Q+FLNDL NDFN++F+ L SF +
Sbjct: 60 GCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRN 119
Query: 116 LRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLES----- 170
L K+ G G C +PGSFY RLFP S+H HS Y L WLSQVP GL +
Sbjct: 120 LEKENGRKIG---SCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGIS 176
Query: 171 -NKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSK 229
NKG I+ + S P + AY +QF +DF+ FL+ SEEL++ GRM+LTF+ ++ +
Sbjct: 177 VNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSEELISRGRMLLTFICKEDEFD--- 233
Query: 230 ECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 289
+LL ++N++V EG +EEEK++ FN+P Y PS E+K V +EGSF I +LE
Sbjct: 234 -HPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLETF 292
Query: 290 EVNWNAYQN------GFKFNEAVDAFNDGGYNVANCMRAVAEPLLVSQFGEAIIDELFKR 343
++A + G + + +VA+ +R++ EP+L S FGEAI+ +L R
Sbjct: 293 NAPYDAGFSIDDDYQGRSHSPVSCDEHARAAHVASVVRSIYEPILASHFGEAILPDLSHR 352
Query: 344 YREIVADRMSKEKTKFINVTVSLTK 368
+ A + K + +V +SL K
Sbjct: 353 IAKNAAKVLRSGKGFYDSVIISLAK 377
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.5 bits (130), Expect = 3e-08
Identities = 49/418 (11%), Positives = 124/418 (29%), Gaps = 121/418 (28%)
Query: 8 HMNGGVGGTSYASNSLVQEKVISIAKPI----TEEAMTKLFCSTSPTKVAIADLGCSSGP 63
HM+ G Y ++ + ++ + + ++
Sbjct: 6 HMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMS-------K 58
Query: 64 NTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSA 123
+ + S +++ + K ++ Q F+ ++ ++ + + +
Sbjct: 59 DAV---SGTLRLFWTLLSK-QEEM--VQKFVEEVLRINYKFLMSPIKT------------ 100
Query: 124 SGAAGQCFFTGVPGSFY----GRLFPRNSVHLFHSSYSL----------QWLSQVPDGLE 169
+ + Y RL+ N +F + Y++ Q L + L
Sbjct: 101 -----EQRQPSMMTRMYIEQRDRLY--NDNQVF-AKYNVSRLQPYLKLRQALLE----LR 148
Query: 170 SNKGNIF---MAST--SPPCVLTA-----YYEQFQRDFSLF-L---KCRSEELVAE---- 211
K N+ + + + + Y Q + DF +F L C S E V E
Sbjct: 149 PAK-NVLIDGVLGSGKT---WVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQK 204
Query: 212 --GRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSE-----GLI------EEEKVNC 258
++ + R + K + L ++ L+ + N
Sbjct: 205 LLYQIDPNWTSRSDHSSNIKLRI---HSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNA 261
Query: 259 FNIPQYTPSPAEIKSEVI-----KEGSFTIDHLEVSEVNWNAYQNGFKFNEAVDAFNDGG 313
FN+ +++ K+ + + + ++ + + +E
Sbjct: 262 FNL----------SCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL--- 308
Query: 314 YNVANC----MRAVAE---PLLVSQFGEAIIDEL--FKRYREIVADRMSKEKTKFINV 362
+C + P +S E+I D L + ++ + D+++ +NV
Sbjct: 309 -KYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNV 365
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.9 bits (126), Expect = 1e-07
Identities = 67/449 (14%), Positives = 123/449 (27%), Gaps = 144/449 (32%)
Query: 6 VLH-MNGGVGGTSYASNSLVQEKV----------ISIAKPITEEA----MTKLFCSTSPT 50
++ + G G T A + + KV +++ + E + KL P
Sbjct: 154 LIDGV-LGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPN 212
Query: 51 KVAIADLGCS-------------------SGPNTLLVASELIKVVNKICDKLGSQLPEFQ 91
+ +D + N LL V+ + + +
Sbjct: 213 WTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL-------VLLNVQNA--------K 257
Query: 92 VFLNDLPGNDFNTIFRSLASFQKIL---R-KQLGSASGAAGQCFFTGVPGSFYGRLFPRN 147
+ N FN KIL R KQ+ AA + S L P
Sbjct: 258 AW------NAFN--LSC-----KILLTTRFKQVTDFLSAATTTHISLDHHS--MTLTPDE 302
Query: 148 SVHLFHSSYSLQWLSQVPDGL--ESNKGN-----IFMASTSPPCVLTAYYEQFQ------ 194
L L++L P L E N I S ++
Sbjct: 303 VKSLL-----LKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTT 357
Query: 195 ------------------RDFSLFLK---------CR--SEELVAEGRMVLTFLGRKS-- 223
S+F + + ++ +V+ L + S
Sbjct: 358 IIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLV 417
Query: 224 -QDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEG--- 279
+ P I + + +E + V+ +NIP+ S I + +
Sbjct: 418 EKQPKEST-ISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYL--DQYFY 474
Query: 280 SFTIDHLEVSEVNWNAYQNGFKFNEAVDAFNDGGYNVANCMRAVAEPLLVSQFGEAIIDE 339
S HL+ E + + F D + + +R + S +I++
Sbjct: 475 SHIGHHLKNIE-------HPERMTLFRMVFLDFRF-LEQKIRHDSTAWNASG---SILNT 523
Query: 340 L--FKRYREIVAD------RMSKEKTKFI 360
L K Y+ + D R+ F+
Sbjct: 524 LQQLKFYKPYICDNDPKYERLVNAILDFL 552
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 50.6 bits (120), Expect = 6e-07
Identities = 59/354 (16%), Positives = 102/354 (28%), Gaps = 106/354 (29%)
Query: 16 TSYASN----SLVQEKVISI---AKPITEEAMTKLF---------------CSTSPTKVA 53
T + S IS+ + +T + + L +T+P +++
Sbjct: 272 TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLS 331
Query: 54 -IADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASF 112
IA+ G T + K VN CDKL + + + LN L ++ +F L+ F
Sbjct: 332 IIAES-IRDGLATW----DNWKHVN--CDKLTTII---ESSLNVLEPAEYRKMFDRLSVF 381
Query: 113 QK----------IL------------RKQLGSASGAAGQCFFTGVPGSF--YGRLF---- 144
++ +L S Q +
Sbjct: 382 PPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQ----PKESTISIPSIYLELKV 437
Query: 145 -PRNSVHLFH----SSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSL 199
N L H Y +P +S+ PP L Y+ +
Sbjct: 438 KLENEYAL-HRSIVDHY------NIPKTFDSDD-------LIPPY-LDQYFYSH-----I 477
Query: 200 ---FLKCRSEELVAEGRMV---LTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEE 253
E + RMV FL +K + W + LN + L
Sbjct: 478 GHHLKNIEHPERMTLFRMVFLDFRFLEQK-----IRHDSTAWNASGSILNTLQQ--LKFY 530
Query: 254 EKVNCFNIPQYTPSPAEIKSEVIKEGSFTI--DHLEVSEVNWNAYQNGFKFNEA 305
+ C N P+Y I + K I + ++ + ++ F EA
Sbjct: 531 KPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALM-AEDEAIFEEA 583
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 370 | |||
| 1m6e_X | 359 | S-adenosyl-L-methionnine:salicylic acid carboxyl m | 100.0 | |
| 2efj_A | 384 | 3,7-dimethylxanthine methyltransferase; SAM-depend | 100.0 | |
| 3b5i_A | 374 | S-adenosyl-L-methionine:salicylic acid carboxyl me | 100.0 | |
| 3ccf_A | 279 | Cyclopropane-fatty-acyl-phospholipid synthase; YP_ | 99.5 | |
| 2p35_A | 259 | Trans-aconitate 2-methyltransferase; SAM dependent | 99.46 | |
| 2yqz_A | 263 | Hypothetical protein TTHA0223; RNA methyltransfera | 99.34 | |
| 3dtn_A | 234 | Putative methyltransferase MM_2633; structural gen | 99.24 | |
| 3bus_A | 273 | REBM, methyltransferase; rebeccamycin synthesis; H | 99.15 | |
| 3hem_A | 302 | Cyclopropane-fatty-acyl-phospholipid synthase 2; p | 99.07 | |
| 3ujc_A | 266 | Phosphoethanolamine N-methyltransferase; parasite; | 99.06 | |
| 3f4k_A | 257 | Putative methyltransferase; structural genomics, P | 99.03 | |
| 3kkz_A | 267 | Uncharacterized protein Q5LES9; putative methyltra | 99.02 | |
| 2aot_A | 292 | HMT, histamine N-methyltransferase; classic methyl | 98.98 | |
| 3h2b_A | 203 | SAM-dependent methyltransferase; alpha-beta protei | 98.98 | |
| 3sm3_A | 235 | SAM-dependent methyltransferases; NESG, structural | 98.96 | |
| 3hnr_A | 220 | Probable methyltransferase BT9727_4108; structural | 98.95 | |
| 3mgg_A | 276 | Methyltransferase; NYSGXRC, PSI-II, protein struct | 98.94 | |
| 4htf_A | 285 | S-adenosylmethionine-dependent methyltransferase; | 98.91 | |
| 4gek_A | 261 | TRNA (CMO5U34)-methyltransferase; structural genom | 98.91 | |
| 3ou2_A | 218 | SAM-dependent methyltransferase; O-methyltransfera | 98.9 | |
| 2o57_A | 297 | Putative sarcosine dimethylglycine methyltransfera | 98.87 | |
| 1kpg_A | 287 | CFA synthase;, cyclopropane-fatty-acyl-phospholipi | 98.87 | |
| 3lcc_A | 235 | Putative methyl chloride transferase; halide methy | 98.86 | |
| 1pjz_A | 203 | Thiopurine S-methyltransferase; polymorphism, S-ad | 98.8 | |
| 3dli_A | 240 | Methyltransferase; PSI-II, NYSGXRC, structural gen | 98.79 | |
| 1vl5_A | 260 | Unknown conserved protein BH2331; putative methylt | 98.77 | |
| 3l8d_A | 242 | Methyltransferase; structural genomics, PSI, nysgr | 98.76 | |
| 4hg2_A | 257 | Methyltransferase type 11; structural genomics, PS | 98.76 | |
| 3dlc_A | 219 | Putative S-adenosyl-L-methionine-dependent methylt | 98.76 | |
| 3e23_A | 211 | Uncharacterized protein RPA2492; alpha-beta protei | 98.75 | |
| 1xxl_A | 239 | YCGJ protein; structural genomics, protein structu | 98.73 | |
| 1xtp_A | 254 | LMAJ004091AAA; SGPP, structural genomics, PSI, pro | 98.73 | |
| 3ege_A | 261 | Putative methyltransferase from antibiotic biosyn | 98.73 | |
| 3g5l_A | 253 | Putative S-adenosylmethionine dependent methyltran | 98.73 | |
| 2fk8_A | 318 | Methoxy mycolic acid synthase 4; S-adenosylmethion | 98.72 | |
| 2p7i_A | 250 | Hypothetical protein; putative methyltransferase, | 98.71 | |
| 3i53_A | 332 | O-methyltransferase; CO-complex, rossmann-like fol | 98.69 | |
| 2qe6_A | 274 | Uncharacterized protein TFU_2867; putative methylt | 98.68 | |
| 3dh0_A | 219 | SAM dependent methyltransferase; cystal structure, | 98.68 | |
| 2g72_A | 289 | Phenylethanolamine N-methyltransferase; HET: SAM F | 98.68 | |
| 3g5t_A | 299 | Trans-aconitate 3-methyltransferase; structural ge | 98.67 | |
| 2a14_A | 263 | Indolethylamine N-methyltransferase; SGC,INMT, str | 98.67 | |
| 1ri5_A | 298 | MRNA capping enzyme; methyltransferase, M7G, messe | 98.65 | |
| 3gwz_A | 369 | MMCR; methyltransferase, mitomycin, S-adenosyl met | 98.65 | |
| 2ex4_A | 241 | Adrenal gland protein AD-003; methyltransferase, s | 98.65 | |
| 3bgv_A | 313 | MRNA CAP guanine-N7 methyltransferase; alternative | 98.65 | |
| 3reo_A | 368 | (ISO)eugenol O-methyltransferase; directed evoluti | 98.65 | |
| 3mcz_A | 352 | O-methyltransferase; adomet_mtases, S-adenosylmeth | 98.64 | |
| 2gb4_A | 252 | Thiopurine S-methyltransferase; 18204406, thiopuri | 98.63 | |
| 3p9c_A | 364 | Caffeic acid O-methyltransferase; S-adenosylmethio | 98.61 | |
| 1nkv_A | 256 | Hypothetical protein YJHP; structural genomics, PS | 98.61 | |
| 3lst_A | 348 | CALO1 methyltransferase; calicheamicin, enediyne, | 98.61 | |
| 3cc8_A | 230 | Putative methyltransferase; structural genomics, j | 98.61 | |
| 3e8s_A | 227 | Putative SAM dependent methyltransferase; NP_74470 | 98.6 | |
| 4a6d_A | 353 | Hydroxyindole O-methyltransferase; melatonin, circ | 98.56 | |
| 3vc1_A | 312 | Geranyl diphosphate 2-C-methyltransferase; rossman | 98.56 | |
| 3dp7_A | 363 | SAM-dependent methyltransferase; structural genomi | 98.54 | |
| 3g2m_A | 299 | PCZA361.24; SAM-dependent methyltransferase, glyco | 98.54 | |
| 1vlm_A | 219 | SAM-dependent methyltransferase; possible histamin | 98.54 | |
| 2ip2_A | 334 | Probable phenazine-specific methyltransferase; pyo | 98.53 | |
| 3bkx_A | 275 | SAM-dependent methyltransferase; YP_807781.1, cycl | 98.52 | |
| 1y8c_A | 246 | S-adenosylmethionine-dependent methyltransferase; | 98.51 | |
| 3ocj_A | 305 | Putative exported protein; structural genomics, PS | 98.51 | |
| 3bkw_A | 243 | MLL3908 protein, S-adenosylmethionine dependent me | 98.5 | |
| 1qzz_A | 374 | RDMB, aclacinomycin-10-hydroxylase; anthracycline, | 98.49 | |
| 2r3s_A | 335 | Uncharacterized protein; methyltransferase domain, | 98.49 | |
| 3pfg_A | 263 | N-methyltransferase; N,N-dimethyltransferase, SAM | 98.48 | |
| 3cgg_A | 195 | SAM-dependent methyltransferase; NP_600671.1, meth | 98.48 | |
| 1x19_A | 359 | CRTF-related protein; methyltransferase, bacterioc | 98.46 | |
| 2kw5_A | 202 | SLR1183 protein; structural genomics, northeast st | 98.45 | |
| 2i62_A | 265 | Nicotinamide N-methyltransferase; structural genom | 98.44 | |
| 3jwg_A | 219 | HEN1, methyltransferase type 12; 1.90A {Clostridiu | 98.42 | |
| 3giw_A | 277 | Protein of unknown function DUF574; rossmann-fold | 98.41 | |
| 2vdw_A | 302 | Vaccinia virus capping enzyme D1 subunit; nucleoti | 98.41 | |
| 4fsd_A | 383 | Arsenic methyltransferase; rossmann fold; 1.75A {C | 98.4 | |
| 1fp1_D | 372 | Isoliquiritigenin 2'-O-methyltransferase; protein- | 98.38 | |
| 3jwh_A | 217 | HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena | 98.38 | |
| 1tw3_A | 360 | COMT, carminomycin 4-O-methyltransferase; anthracy | 98.38 | |
| 4e2x_A | 416 | TCAB9; kijanose, tetronitrose, tetradeoxy sugar, s | 98.36 | |
| 2gs9_A | 211 | Hypothetical protein TT1324; methyl transferase, s | 98.36 | |
| 3gu3_A | 284 | Methyltransferase; alpha-beta protein, structural | 98.35 | |
| 3i9f_A | 170 | Putative type 11 methyltransferase; structural gen | 98.32 | |
| 3ofk_A | 216 | Nodulation protein S; NODS, N-methyltransferase, S | 98.31 | |
| 3ggd_A | 245 | SAM-dependent methyltransferase; YP_325210.1, stru | 98.31 | |
| 2xvm_A | 199 | Tellurite resistance protein TEHB; antibiotic resi | 98.3 | |
| 3g07_A | 292 | 7SK snRNA methylphosphate capping enzyme; structur | 98.27 | |
| 3m70_A | 286 | Tellurite resistance protein TEHB homolog; structu | 98.26 | |
| 2ld4_A | 176 | Anamorsin; methyltransferase-like fold, alpha/beta | 98.23 | |
| 2avn_A | 260 | Ubiquinone/menaquinone biosynthesis methyltransfe | 98.21 | |
| 2zfu_A | 215 | Nucleomethylin, cerebral protein 1; nucleolar prot | 98.21 | |
| 1zg3_A | 358 | Isoflavanone 4'-O-methyltransferase; rossman fold, | 98.19 | |
| 2p8j_A | 209 | S-adenosylmethionine-dependent methyltransferase; | 98.18 | |
| 1fp2_A | 352 | Isoflavone O-methyltransferase; protein-product co | 98.16 | |
| 3d2l_A | 243 | SAM-dependent methyltransferase; ZP_00538691.1, st | 98.12 | |
| 3q87_B | 170 | N6 adenine specific DNA methylase; SAM-methyltrans | 98.04 | |
| 1ve3_A | 227 | Hypothetical protein PH0226; dimer, riken structur | 98.02 | |
| 3bxo_A | 239 | N,N-dimethyltransferase; desosamine, sugar, carboh | 98.02 | |
| 3thr_A | 293 | Glycine N-methyltransferase; GNMT, folate, methylt | 98.02 | |
| 1yzh_A | 214 | TRNA (guanine-N(7)-)-methyltransferase; alpha-beta | 98.0 | |
| 4df3_A | 233 | Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; | 98.0 | |
| 3mq2_A | 218 | 16S rRNA methyltransferase; methyltranferase, ribo | 97.98 | |
| 1wzn_A | 252 | SAM-dependent methyltransferase; structural genomi | 97.98 | |
| 3grz_A | 205 | L11 mtase, ribosomal protein L11 methyltransferase | 97.94 | |
| 2pxx_A | 215 | Uncharacterized protein MGC2408; structural genomi | 97.88 | |
| 3iv6_A | 261 | Putative Zn-dependent alcohol dehydrogenase; alpha | 97.87 | |
| 3hm2_A | 178 | Precorrin-6Y C5,15-methyltransferase; alpha-beta-s | 97.83 | |
| 3dmg_A | 381 | Probable ribosomal RNA small subunit methyltransf; | 97.81 | |
| 3m33_A | 226 | Uncharacterized protein; structural genomics, PSI- | 97.81 | |
| 2fca_A | 213 | TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bac | 97.8 | |
| 3e05_A | 204 | Precorrin-6Y C5,15-methyltransferase (decarboxyla; | 97.8 | |
| 3opn_A | 232 | Putative hemolysin; structural genomics, PSI-2, pr | 97.79 | |
| 3dxy_A | 218 | TRNA (guanine-N(7)-)-methyltransferase; rossmann f | 97.76 | |
| 1dus_A | 194 | MJ0882; hypothetical protein, methanococcus jannas | 97.7 | |
| 2plw_A | 201 | Ribosomal RNA methyltransferase, putative; malaria | 97.7 | |
| 3q7e_A | 349 | Protein arginine N-methyltransferase 1; HET: SAH; | 97.69 | |
| 1ej0_A | 180 | FTSJ; methyltransferase, adoMet, adenosyl methioni | 97.65 | |
| 1zx0_A | 236 | Guanidinoacetate N-methyltransferase; structural g | 97.64 | |
| 3mti_A | 185 | RRNA methylase; SAM-dependent, PSI, MCSG, structur | 97.63 | |
| 2pjd_A | 343 | Ribosomal RNA small subunit methyltransferase C; g | 97.59 | |
| 1fbn_A | 230 | MJ fibrillarin homologue; MJ proteins, ribosomal R | 97.57 | |
| 3r0q_C | 376 | Probable protein arginine N-methyltransferase 4.2; | 97.55 | |
| 3ckk_A | 235 | TRNA (guanine-N(7)-)-methyltransferase; mettl1, S- | 97.53 | |
| 3lbf_A | 210 | Protein-L-isoaspartate O-methyltransferase; modifi | 97.52 | |
| 4dcm_A | 375 | Ribosomal RNA large subunit methyltransferase G; 2 | 97.52 | |
| 2nxc_A | 254 | L11 mtase, ribosomal protein L11 methyltransferase | 97.51 | |
| 3p9n_A | 189 | Possible methyltransferase (methylase); RV2966C, a | 97.46 | |
| 3hp7_A | 291 | Hemolysin, putative; structural genomics, APC64019 | 97.45 | |
| 1nt2_A | 210 | Fibrillarin-like PRE-rRNA processing protein; adeM | 97.44 | |
| 1l3i_A | 192 | Precorrin-6Y methyltransferase/putative decarboxyl | 97.41 | |
| 1p91_A | 269 | Ribosomal RNA large subunit methyltransferase A; R | 97.4 | |
| 1af7_A | 274 | Chemotaxis receptor methyltransferase CHER; chemot | 97.39 | |
| 1xdz_A | 240 | Methyltransferase GIDB; MCSG, protein structure in | 97.36 | |
| 3fzg_A | 200 | 16S rRNA methylase; methyltransferase, plasmid, tr | 97.35 | |
| 3eey_A | 197 | Putative rRNA methylase; rRNA methylation, S-adeno | 97.35 | |
| 2fyt_A | 340 | Protein arginine N-methyltransferase 3; structural | 97.35 | |
| 3evz_A | 230 | Methyltransferase; NYSGXRC, NEW YORK SGX research | 97.34 | |
| 1o9g_A | 250 | RRNA methyltransferase; antibiotic resistance, Se- | 97.32 | |
| 4hc4_A | 376 | Protein arginine N-methyltransferase 6; HRMT1L6, S | 97.31 | |
| 2nyu_A | 196 | Putative ribosomal RNA methyltransferase 2; SAM, s | 97.3 | |
| 1vbf_A | 231 | 231AA long hypothetical protein-L-isoaspartate O- | 97.29 | |
| 3id6_C | 232 | Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; | 97.27 | |
| 1jsx_A | 207 | Glucose-inhibited division protein B; methyltransf | 97.25 | |
| 3htx_A | 950 | HEN1; HEN1, small RNA methyltransferase, protein-R | 97.24 | |
| 3bwc_A | 304 | Spermidine synthase; SAM, SGPP, structura genomics | 97.23 | |
| 3sso_A | 419 | Methyltransferase; macrolide, natural product, ros | 97.23 | |
| 4dzr_A | 215 | Protein-(glutamine-N5) methyltransferase, release | 97.23 | |
| 2yxd_A | 183 | Probable cobalt-precorrin-6Y C(15)-methyltransfer | 97.23 | |
| 2yxe_A | 215 | Protein-L-isoaspartate O-methyltransferase; rossma | 97.21 | |
| 2b3t_A | 276 | Protein methyltransferase HEMK; translation termin | 97.21 | |
| 3p2e_A | 225 | 16S rRNA methylase; methyltransferase, transferase | 97.2 | |
| 3orh_A | 236 | Guanidinoacetate N-methyltransferase; structura ge | 97.18 | |
| 3lpm_A | 259 | Putative methyltransferase; structural genomics, p | 97.16 | |
| 2ozv_A | 260 | Hypothetical protein ATU0636; structural genomics, | 97.14 | |
| 1i1n_A | 226 | Protein-L-isoaspartate O-methyltransferase; S-aden | 97.13 | |
| 1g6q_1 | 328 | HnRNP arginine N-methyltransferase; SAM-binding do | 97.08 | |
| 3mb5_A | 255 | SAM-dependent methyltransferase; RNA methyltransfe | 97.08 | |
| 2pbf_A | 227 | Protein-L-isoaspartate O-methyltransferase beta-A | 97.07 | |
| 2esr_A | 177 | Methyltransferase; structural genomics, hypothetic | 97.06 | |
| 3uwp_A | 438 | Histone-lysine N-methyltransferase, H3 lysine-79; | 97.04 | |
| 3tfw_A | 248 | Putative O-methyltransferase; PSI-biology, nysgrc, | 96.94 | |
| 1i9g_A | 280 | Hypothetical protein RV2118C; mtase, adoMet, cryst | 96.93 | |
| 2y1w_A | 348 | Histone-arginine methyltransferase CARM1; histone | 96.91 | |
| 1r18_A | 227 | Protein-L-isoaspartate(D-aspartate)-O-methyltrans; | 96.89 | |
| 1yb2_A | 275 | Hypothetical protein TA0852; structural genomics, | 96.87 | |
| 2b25_A | 336 | Hypothetical protein; structural genomics, methyl | 96.85 | |
| 2ift_A | 201 | Putative methylase HI0767; NESG, Y767_haein, struc | 96.83 | |
| 3bzb_A | 281 | Uncharacterized protein; RED ALGA, protein structu | 96.82 | |
| 2ipx_A | 233 | RRNA 2'-O-methyltransferase fibrillarin; FBL, stru | 96.82 | |
| 1u2z_A | 433 | Histone-lysine N-methyltransferase, H3 lysine-79 s | 96.81 | |
| 1jg1_A | 235 | PIMT;, protein-L-isoaspartate O-methyltransferase; | 96.79 | |
| 2gpy_A | 233 | O-methyltransferase; structural genomics, PSI, pro | 96.78 | |
| 1dl5_A | 317 | Protein-L-isoaspartate O-methyltransferase; isoasp | 96.78 | |
| 2vdv_E | 246 | TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl | 96.75 | |
| 1o54_A | 277 | SAM-dependent O-methyltransferase; TM0748, structu | 96.73 | |
| 3fpf_A | 298 | Mtnas, putative uncharacterized protein; thermonic | 96.72 | |
| 2fhp_A | 187 | Methylase, putative; alpha-beta-alpha sandwich, st | 96.7 | |
| 2pwy_A | 258 | TRNA (adenine-N(1)-)-methyltransferase; mtase, ado | 96.69 | |
| 3duw_A | 223 | OMT, O-methyltransferase, putative; alternating of | 96.67 | |
| 3gjy_A | 317 | Spermidine synthase; APC62791, structural genomics | 96.65 | |
| 3ntv_A | 232 | MW1564 protein; rossmann fold, putative methyltran | 96.65 | |
| 3adn_A | 294 | Spermidine synthase; aminopropyltransferase, polya | 96.64 | |
| 1g8a_A | 227 | Fibrillarin-like PRE-rRNA processing protein; rRNA | 96.62 | |
| 3njr_A | 204 | Precorrin-6Y methylase; methyltransferase, decarbo | 96.61 | |
| 2fpo_A | 202 | Methylase YHHF; structural genomics, putative meth | 96.58 | |
| 3dou_A | 191 | Ribosomal RNA large subunit methyltransferase J; c | 96.58 | |
| 1ws6_A | 171 | Methyltransferase; structural genomics, riken stru | 96.56 | |
| 3gdh_A | 241 | Trimethylguanosine synthase homolog; M7G, CAP, dim | 96.47 | |
| 2frn_A | 278 | Hypothetical protein PH0793; structural genomics, | 96.45 | |
| 1uir_A | 314 | Polyamine aminopropyltransferase; spermidien synth | 96.41 | |
| 3u81_A | 221 | Catechol O-methyltransferase; neurotransmitter deg | 96.4 | |
| 3g89_A | 249 | Ribosomal RNA small subunit methyltransferase G; 1 | 96.38 | |
| 2pt6_A | 321 | Spermidine synthase; transferase, structural genom | 96.37 | |
| 2h00_A | 254 | Methyltransferase 10 domain containing protein; st | 96.27 | |
| 1ixk_A | 315 | Methyltransferase; open beta sheet; 1.90A {Pyrococ | 96.26 | |
| 3dr5_A | 221 | Putative O-methyltransferase; Q8NRD3, CGL1119, PF0 | 96.22 | |
| 1sqg_A | 429 | SUN protein, FMU protein; rossmann-fold, mixed bet | 96.17 | |
| 2xyq_A | 290 | Putative 2'-O-methyl transferase; transferase-vira | 96.17 | |
| 3tr6_A | 225 | O-methyltransferase; cellular processes; HET: SAH; | 96.14 | |
| 3frh_A | 253 | 16S rRNA methylase; methyltransferase domain, heli | 96.11 | |
| 2hnk_A | 239 | SAM-dependent O-methyltransferase; modified rossma | 96.1 | |
| 2bm8_A | 236 | Cephalosporin hydroxylase CMCI; cephamycin biosynt | 96.09 | |
| 1xj5_A | 334 | Spermidine synthase 1; structural genomics, protei | 96.08 | |
| 2oxt_A | 265 | Nucleoside-2'-O-methyltransferase; flavivirus, vir | 95.97 | |
| 3tma_A | 354 | Methyltransferase; thump domain; 2.05A {Thermus th | 95.92 | |
| 2i7c_A | 283 | Spermidine synthase; transferase, structural genom | 95.89 | |
| 2yvl_A | 248 | TRMI protein, hypothetical protein; tRNA, methyltr | 95.87 | |
| 2wa2_A | 276 | Non-structural protein 5; transferase, S-adenosyl- | 95.85 | |
| 2p41_A | 305 | Type II methyltransferase; vizier, viral enzymes i | 95.79 | |
| 3ajd_A | 274 | Putative methyltransferase MJ0026; tRNA, M5C, ross | 95.79 | |
| 2o07_A | 304 | Spermidine synthase; structural genomics, structur | 95.77 | |
| 3r3h_A | 242 | O-methyltransferase, SAM-dependent; structural gen | 95.76 | |
| 3b3j_A | 480 | Histone-arginine methyltransferase CARM1; protein | 95.74 | |
| 2b2c_A | 314 | Spermidine synthase; beta-alpha, transferase; 2.50 | 95.72 | |
| 1inl_A | 296 | Spermidine synthase; beta-barrel, rossman fold, st | 95.72 | |
| 1mjf_A | 281 | Spermidine synthase; spermidine synthetase, struct | 95.62 | |
| 2avd_A | 229 | Catechol-O-methyltransferase; structural genomics, | 95.6 | |
| 3lcv_B | 281 | Sisomicin-gentamicin resistance methylase SGM; ant | 95.59 | |
| 2frx_A | 479 | Hypothetical protein YEBU; rossmann-type S-adenosy | 95.57 | |
| 2yxl_A | 450 | PH0851 protein, 450AA long hypothetical FMU protei | 95.54 | |
| 3a27_A | 272 | TYW2, uncharacterized protein MJ1557; wybutosine m | 95.43 | |
| 1iy9_A | 275 | Spermidine synthase; rossmann fold, structural gen | 95.29 | |
| 3m6w_A | 464 | RRNA methylase; rRNA methyltransferase, 5-methylcy | 95.25 | |
| 3cbg_A | 232 | O-methyltransferase; cyanobacterium; HET: SAH FER | 95.23 | |
| 1nv8_A | 284 | HEMK protein; class I adoMet-dependent methyltrans | 95.19 | |
| 2igt_A | 332 | SAM dependent methyltransferase; alpha-beta sandwi | 95.09 | |
| 1wxx_A | 382 | TT1595, hypothetical protein TTHA1280; thermus the | 95.03 | |
| 3c3p_A | 210 | Methyltransferase; NP_951602.1, structural genomic | 94.87 | |
| 1ne2_A | 200 | Hypothetical protein TA1320; structural genomics, | 94.85 | |
| 1sui_A | 247 | Caffeoyl-COA O-methyltransferase; rossmann fold, p | 94.76 | |
| 3c3y_A | 237 | Pfomt, O-methyltransferase; plant secondary metabo | 94.7 | |
| 2f8l_A | 344 | Hypothetical protein LMO1582; structural genomics, | 94.55 | |
| 2ih2_A | 421 | Modification methylase TAQI; DNA, DNA methyltransf | 94.52 | |
| 2as0_A | 396 | Hypothetical protein PH1915; RNA methyltransferase | 94.41 | |
| 4gqb_A | 637 | Protein arginine N-methyltransferase 5; TIM barrel | 94.4 | |
| 3lec_A | 230 | NADB-rossmann superfamily protein; PSI, MCSG, stru | 94.26 | |
| 3gnl_A | 244 | Uncharacterized protein, DUF633, LMOF2365_1472; st | 94.16 | |
| 3kr9_A | 225 | SAM-dependent methyltransferase; class I rossmann- | 94.15 | |
| 4dmg_A | 393 | Putative uncharacterized protein TTHA1493; rRNA, m | 94.05 | |
| 2b78_A | 385 | Hypothetical protein SMU.776; structure genomics, | 93.39 | |
| 3m4x_A | 456 | NOL1/NOP2/SUN family protein; mtase domain, PUA do | 93.02 | |
| 2cmg_A | 262 | Spermidine synthase; transferase, putrescine amino | 92.82 | |
| 2qm3_A | 373 | Predicted methyltransferase; putative methyltransf | 92.53 | |
| 3c0k_A | 396 | UPF0064 protein YCCW; PUA domain, adoMet dependent | 91.95 | |
| 1wy7_A | 207 | Hypothetical protein PH1948; seven-stranded beta s | 91.67 | |
| 2yx1_A | 336 | Hypothetical protein MJ0883; methyl transferase, t | 91.5 | |
| 3v97_A | 703 | Ribosomal RNA large subunit methyltransferase L; Y | 90.97 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 90.83 | |
| 3k6r_A | 278 | Putative transferase PH0793; structural genomics, | 90.72 | |
| 3khk_A | 544 | Type I restriction-modification system methylation | 90.42 | |
| 3tm4_A | 373 | TRNA (guanine N2-)-methyltransferase TRM14; rossma | 90.31 | |
| 1zq9_A | 285 | Probable dimethyladenosine transferase; SGC, struc | 90.29 | |
| 3tqs_A | 255 | Ribosomal RNA small subunit methyltransferase A; p | 90.01 | |
| 3s1s_A | 878 | Restriction endonuclease bpusi; PD--(D/E)XK cataly | 89.95 | |
| 3evf_A | 277 | RNA-directed RNA polymerase NS5; NS5 methyltransfe | 89.82 | |
| 3gru_A | 295 | Dimethyladenosine transferase; rossman fold, ribos | 89.65 | |
| 2jjq_A | 425 | Uncharacterized RNA methyltransferase pyrab10780; | 87.0 | |
| 2h1r_A | 299 | Dimethyladenosine transferase, putative; SGC toron | 86.07 | |
| 3k0b_A | 393 | Predicted N6-adenine-specific DNA methylase; methy | 85.18 | |
| 2okc_A | 445 | Type I restriction enzyme stysji M protein; NP_813 | 84.66 | |
| 3fut_A | 271 | Dimethyladenosine transferase; methyltransferase, | 84.56 | |
| 3ldu_A | 385 | Putative methylase; structural genomics, PSI-2, pr | 84.18 | |
| 3ldg_A | 384 | Putative uncharacterized protein SMU.472; YPSC, me | 82.3 | |
| 1qam_A | 244 | ERMC' methyltransferase; rRNA methyltransferase ER | 80.35 |
| >1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-104 Score=780.86 Aligned_cols=356 Identities=63% Similarity=1.076 Sum_probs=334.0
Q ss_pred CcccceeeccCCCCCchhHhhhHHHHHHHHHhHHHHHHHHHhhcccC-CCCceEEEeecCCCCcchHHHHHHHHHHHHHH
Q 017514 1 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCST-SPTKVAIADLGCSSGPNTLLVASELIKVVNKI 79 (370)
Q Consensus 1 m~~~~~l~M~gg~G~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~-~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~ 79 (370)
|+++++|||+||+|++||++||.+|++++..++|++++||++++... .+++++|||||||+|+||+++++.||++|+++
T Consensus 1 m~~~~~~~m~gg~G~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~ 80 (359)
T 1m6e_X 1 MDVRQVLHMKGGAGENSYAMNSFIQRQVISITKPITEAAITALYSGDTVTTRLAIADLGCSSGPNALFAVTELIKTVEEL 80 (359)
T ss_dssp CCCHHHHCCCCCTTSTTTTSSCHHHHHHHHHTHHHHHHHHHHHHSSSSSSSEECCEEESCCSSTTTTTGGGTTHHHHHHH
T ss_pred CCcccccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEecCCCCCcchHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999988765 67899999999999999999999999999999
Q ss_pred HHhcCC-CCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCceEEeecCCCcccccCCCCceeEEEecccc
Q 017514 80 CDKLGS-QLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSL 158 (370)
Q Consensus 80 ~~~~~~-~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~al 158 (370)
|.+.++ ++|+|||||||||+||||+||++|+.++ ..+ ++||++|||||||+||||++|+|++||++||
T Consensus 81 ~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~-------~~~----~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aL 149 (359)
T 1m6e_X 81 RKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN-------DVD----GVCFINGVPGSFYGRLFPRNTLHFIHSSYSL 149 (359)
T ss_dssp HHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC-------SCT----TCEEEEEEESCSSSCCSCTTCBSCEEEESCT
T ss_pred HHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc-------ccC----CCEEEEecchhhhhccCCCCceEEEEehhhh
Confidence 987776 6789999999999999999999999753 111 4799999999999999999999999999999
Q ss_pred ccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeccCCCCCCCchhhhHHHHH
Q 017514 159 QWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELL 238 (370)
Q Consensus 159 hWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l 238 (370)
||||++|+.+.+|||+||+++++|++|.+||++||++||..||++|++||||||+||++++|+++.++++++++.+|++|
T Consensus 150 HWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~l 229 (359)
T 1m6e_X 150 MWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRASTECCLIWQLL 229 (359)
T ss_dssp TBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEECSSSSSSSTTTSTTTHHH
T ss_pred hhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEecCCCCCccccchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888878899999
Q ss_pred HHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEEEeecccccccCccccccccccccccchhhh
Q 017514 239 ATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQNGFKFNEAVDAFNDGGYNVAN 318 (370)
Q Consensus 239 ~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~~~~w~~~~~~~~~~D~~~~~~~~a~~~a~ 318 (370)
.++|++||.||+|++|++|+||+|+|+||++|++++|+++|+|+|+++|+++.+|++++++ +|...+....|+.+++
T Consensus 230 ~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~e~~~~~~~~~~~~---~d~~~~~~~~g~~~a~ 306 (359)
T 1m6e_X 230 AMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCTKD---GDGGGSVEEEGYNVAR 306 (359)
T ss_dssp HHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEEEEEEETTCCSSC---TTCCSSTTTTTTHHHH
T ss_pred HHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEEEEEeeccCcccch---hhhhhhhhHhHhHhhh
Confidence 9999999999999999999999999999999999999999999999999999999876542 2322234678999999
Q ss_pred hhHhhhhhHHHHhhChhHHHHHHHHHHHHHHhhhhhcCCcEEEEEEEEEecC
Q 017514 319 CMRAVAEPLLVSQFGEAIIDELFKRYREIVADRMSKEKTKFINVTVSLTKIG 370 (370)
Q Consensus 319 ~~RA~~epll~~hfg~~i~Delf~r~~~~v~~~~~~~~~~~~~~~~~L~r~~ 370 (370)
++|||+||+|.+|||++++|+||+||++++++++..+++++++++++|+||.
T Consensus 307 ~~Ra~~e~ll~~hfG~~i~d~lf~ry~~~~~~~~~~~~~~~~~~~~~L~k~~ 358 (359)
T 1m6e_X 307 CMRAVAEPLLLDHFGEAIIEDVFHRYKLLIIERMSKEKTKFINVIVSLIRKS 358 (359)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHSSCCEEEEEEEEEEBCC
T ss_pred hhhhhcchhhHHhccHHHHHHHHHHHHHHHHHHHhhCCCceEEEEEEEEeCC
Confidence 9999999999999999999999999999999999999999999999999984
|
| >2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-101 Score=764.33 Aligned_cols=360 Identities=41% Similarity=0.707 Sum_probs=315.1
Q ss_pred CcccceeeccCCCCCchhHhhhHHHHHHHHHhHHHHHHHHHhhcccCCCC---ceEEEeecCCCCcchHHHHHHHHHHHH
Q 017514 1 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSPT---KVAIADLGCSSGPNTLLVASELIKVVN 77 (370)
Q Consensus 1 m~~~~~l~M~gg~G~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~---~~~IaD~Gcs~G~Ns~~~~~~ii~~i~ 77 (370)
|+++++|||+||+|++||++||. |++++..++|++++||++++....++ +++|||||||+|+||+++++.||++|+
T Consensus 1 m~~~~~~~M~gg~G~~sY~~nS~-Q~~~~~~~~~~~~~ai~~l~~~~~~~~~~~~~IaDlGCssG~NT~~~v~~ii~~i~ 79 (384)
T 2efj_A 1 MELQEVLHMNGGEGDTSYAKNSS-YNLFLIRVKPVLEQCIQELLRANLPNINKCFKVGDLGCASGPNTFSTVRDIVQSID 79 (384)
T ss_dssp --CTTTCCCCC----CCHHHHCC-TTTTHHHHHHHHHHHHHHHHHTTCTTTTTEEEEEEETCCSSHHHHHHHHHHHHHHT
T ss_pred CCcccccccCCCCChhhHHHhHH-HHHHHHHHHHHHHHHHHHhhhcccCCcCCceEEEecCCCCCchHHHHHHHHHHHHH
Confidence 89999999999999999999999 99999999999999999988754555 999999999999999999999999999
Q ss_pred HHHHh--cCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCceEEeecCCCcccccCCCCceeEEEec
Q 017514 78 KICDK--LGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSS 155 (370)
Q Consensus 78 ~~~~~--~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~ 155 (370)
++|.+ .+.++|+|||||||||+||||+||++||.+.+++.+..+... ++||++|||||||+||||++|+|++||+
T Consensus 80 ~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~---~~~f~~gvpgSFy~rlfp~~S~d~v~Ss 156 (384)
T 2efj_A 80 KVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKI---GSCLIGAMPGSFYSRLFPEESMHFLHSC 156 (384)
T ss_dssp CC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCT---TSEEEEECCSCTTSCCSCTTCEEEEEEE
T ss_pred HHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCC---CceEEEecchhhhhccCCCCceEEEEec
Confidence 99865 555678999999999999999999999999998877666544 6899999999999999999999999999
Q ss_pred cccccccCCCCCccC------CCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeccCCC--CCC
Q 017514 156 YSLQWLSQVPDGLES------NKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQ--DPS 227 (370)
Q Consensus 156 ~alhWls~~P~~~~~------nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~~~--~~~ 227 (370)
+||||||++|+.+.+ |||+||+++++|++|.+||++||++||.+||++|++||||||+|+++++|+++. ++.
T Consensus 157 ~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra~eL~pGG~mvl~~~gr~~~~~~~~ 236 (384)
T 2efj_A 157 YCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSEELISRGRMLLTFICKEDEFDHPN 236 (384)
T ss_dssp SCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCTTTCCCC
T ss_pred ceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCCcccCcc
Confidence 999999999998886 999999999999999999999999999999999999999999999999999998 765
Q ss_pred CchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEEEeeccccc---ccCcc-cc
Q 017514 228 SKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAY---QNGFK-FN 303 (370)
Q Consensus 228 ~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~~~~w~~~---~~~~~-~~ 303 (370)
++ +.|.++|++||.||+|++|++|+||+|+|+||++|++++|+++|+|+|+++|+++.+|+++ ++... .+
T Consensus 237 ~~------~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~le~~~~~~~~~~~~~~~~~~~~ 310 (384)
T 2efj_A 237 SM------DLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLETFNAPYDAGFSIDDDYQGRS 310 (384)
T ss_dssp HH------HHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEEEEEEEETTTTCCC--------
T ss_pred cH------HHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEEEEEeecccccccccccccccc
Confidence 43 3899999999999999999999999999999999999999999999999999999999876 33100 01
Q ss_pred ccc--cccccccchhhhhhHhhhhhHHHHhhChhHHHHHHHHHHHHHHhhhhhcCCcEEEEEEEEEecC
Q 017514 304 EAV--DAFNDGGYNVANCMRAVAEPLLVSQFGEAIIDELFKRYREIVADRMSKEKTKFINVTVSLTKIG 370 (370)
Q Consensus 304 D~~--~~~~~~a~~~a~~~RA~~epll~~hfg~~i~Delf~r~~~~v~~~~~~~~~~~~~~~~~L~r~~ 370 (370)
|.. .+....|+.+++++||++||+|.+|||++|+|+||+||++++++++..+++++++++++|+||+
T Consensus 311 ~~~~~~d~~~~g~~~a~~iRa~~epll~~hfG~~i~d~lF~ry~~~~~~~~~~~~~~~~~~~~~L~k~~ 379 (384)
T 2efj_A 311 HSPVSCDEHARAAHVASVVRSIYEPILASHFGEAILPDLSHRIAKNAAKVLRSGKGFYDSVIISLAKKP 379 (384)
T ss_dssp -CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEEECC
T ss_pred cccccchHhHhHHHhhhhhHHhhhhhhHHhccHHHHHHHHHHHHHHHHHHHhhCCCceEEEEEEEEEcc
Confidence 100 0135678999999999999999999999999999999999999999999999999999999984
|
| >3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-97 Score=738.38 Aligned_cols=357 Identities=36% Similarity=0.592 Sum_probs=299.5
Q ss_pred CcccceeeccCCCCCchhHhhhHHHHHHHHHhHHHHHHHHHhhcccC--CCCceEEEeecCCCCcchHHHHHHHHHHHHH
Q 017514 1 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCST--SPTKVAIADLGCSSGPNTLLVASELIKVVNK 78 (370)
Q Consensus 1 m~~~~~l~M~gg~G~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~--~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~ 78 (370)
|+++++|||+||+|++||++||.+|++++..++|++++||+++.... .+++++|||||||+|+||+.+++.||++|++
T Consensus 1 m~~~~~~~m~gg~g~~sY~~nS~~Q~~~~~~~~~~~~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~ 80 (374)
T 3b5i_A 1 MKLERLLSMKGGKGQDSYANNSLAQAMHARSMLHLLEETLENVHLNSSASPPPFTAVDLGCSSGANTVHIIDFIVKHISK 80 (374)
T ss_dssp -------------------------CTTHHHHHHHHHHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHHHHHHHHHH
T ss_pred CCcccccCCCCCCCcchHHHhhHHHHHHHHHHHHHHHHHHHHhhccccCCCCceEEEecCCCCChhHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999987754 4679999999999999999999999999999
Q ss_pred HHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCCCCceEEeecCCCcccccCCCCceeEEEec
Q 017514 79 ICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSS 155 (370)
Q Consensus 79 ~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~ 155 (370)
+|.+.+.++|++||+|||||+||||+||++|+.+++++.. ..+... ++||++|||||||+||||++|+|++||+
T Consensus 81 ~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~---~~~f~~gvpgSFy~rlfP~~S~d~v~Ss 157 (374)
T 3b5i_A 81 RFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGN---RSYFVAGVPGSFYRRLFPARTIDFFHSA 157 (374)
T ss_dssp HHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCC---BCSEEEEEESCTTSCCSCTTCEEEEEEE
T ss_pred HHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCC---CceEEEecChhhhcccCCCcceEEEEec
Confidence 9988887888999999999999999999999986542210 011111 5799999999999999999999999999
Q ss_pred cccccccCCCCCccC------CCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeccCCCCCCC-
Q 017514 156 YSLQWLSQVPDGLES------NKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSS- 228 (370)
Q Consensus 156 ~alhWls~~P~~~~~------nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~~~~~~~- 228 (370)
+||||||++|+.+.+ |||+||+++++|+ |.+||++||++||..||++|++||||||+||++++|+++.++.+
T Consensus 158 ~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~-v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~gr~~~~~~~~ 236 (374)
T 3b5i_A 158 FSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEK-TTTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRTSVDPTDQ 236 (374)
T ss_dssp SCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHH-HHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCSSTTCC
T ss_pred ceeeeeccCchhhhccccccccCCceEeCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEecCCCCccccc
Confidence 999999999998875 9999999999998 99999999999999999999999999999999999999988776
Q ss_pred chhhhHH-HHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEEEeecccccccCcccccccc
Q 017514 229 KECCYIW-ELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQNGFKFNEAVD 307 (370)
Q Consensus 229 ~~~~~~~-~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~~~~w~~~~~~~~~~D~~~ 307 (370)
.+.+.+| ++|.++|++|+.||+|+++++|+|++|+|+||++|++++|+++|+|+|+++|+++.+|+++.+.. +|
T Consensus 237 ~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F~I~~le~~~~~~~~~~~~~--~~--- 311 (374)
T 3b5i_A 237 GGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAIDKLVVYKGGSPLVVNEP--DD--- 311 (374)
T ss_dssp HHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSEEEEEEEEEECCCCCCCSST--TC---
T ss_pred cchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCCcEEEEEEEEeecCCcccccc--ch---
Confidence 4456788 99999999999999999999999999999999999999999888899999999999998764421 23
Q ss_pred ccccccchhhhhhHhhhhhHHHHhhChhHHHHHHHHHHHHHHhhhh--hcCCc--EEEEEEEEE
Q 017514 308 AFNDGGYNVANCMRAVAEPLLVSQFGEAIIDELFKRYREIVADRMS--KEKTK--FINVTVSLT 367 (370)
Q Consensus 308 ~~~~~a~~~a~~~RA~~epll~~hfg~~i~Delf~r~~~~v~~~~~--~~~~~--~~~~~~~L~ 367 (370)
....|+.+++++|||+||+|.+|||++++|+||+||++++++++. .++.+ +++++++|+
T Consensus 312 -~~~~g~~~a~~~Ra~~e~ll~~hfg~~i~d~lf~ry~~~~~~~~~~~~~~~~~~~~~~~~~l~ 374 (374)
T 3b5i_A 312 -ASEVGRAFASSCRSVAGVLVEAHIGEELSNKLFSRVESRATSHAKDVLVNLQFFHIVASLSFT 374 (374)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTCHHHHTTCCCEEEEEEEEEC
T ss_pred -hHHHHHHHHHHHHHhccchhHhhccHHHHHHHHHHHHHHHHHhHHHhhhccccceEEEEEEeC
Confidence 356789999999999999999999999999999999999999988 67777 899998885
|
| >3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=99.50 E-value=9.5e-13 Score=123.65 Aligned_cols=228 Identities=21% Similarity=0.254 Sum_probs=140.2
Q ss_pred CchhHhhhHHHHHHHHHhHHHHHHHHHhhcccCCCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEe
Q 017514 15 GTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFL 94 (370)
Q Consensus 15 ~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~ 94 (370)
...|.++...|......+. +.+. .....+|+|+|||+|..+..+. + +..+|+.
T Consensus 32 a~~y~~~~~~~~~~~~~l~-------~~l~---~~~~~~vLDiGcG~G~~~~~l~--------~---------~~~~v~g 84 (279)
T 3ccf_A 32 ATLYQDKHSFVWQYGEDLL-------QLLN---PQPGEFILDLGCGTGQLTEKIA--------Q---------SGAEVLG 84 (279)
T ss_dssp ---------CCSSSCCHHH-------HHHC---CCTTCEEEEETCTTSHHHHHHH--------H---------TTCEEEE
T ss_pred HHHHhhcchHHHHHHHHHH-------HHhC---CCCCCEEEEecCCCCHHHHHHH--------h---------CCCeEEE
Confidence 3567776666543332221 1111 1235699999999999887665 1 2367888
Q ss_pred CCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCce
Q 017514 95 NDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGN 174 (370)
Q Consensus 95 nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~ 174 (370)
.|+. +.......+.. . +-.|..+ ++ ..+.+++++|+++++.++||+...
T Consensus 85 vD~s-----------~~~~~~a~~~~-~-----~~~~~~~---d~-~~~~~~~~fD~v~~~~~l~~~~d~---------- 133 (279)
T 3ccf_A 85 TDNA-----------ATMIEKARQNY-P-----HLHFDVA---DA-RNFRVDKPLDAVFSNAMLHWVKEP---------- 133 (279)
T ss_dssp EESC-----------HHHHHHHHHHC-T-----TSCEEEC---CT-TTCCCSSCEEEEEEESCGGGCSCH----------
T ss_pred EECC-----------HHHHHHHHhhC-C-----CCEEEEC---Ch-hhCCcCCCcCEEEEcchhhhCcCH----------
Confidence 8875 33322222221 1 2244444 55 334457899999999999996531
Q ss_pred eeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchh
Q 017514 175 IFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEE 254 (370)
Q Consensus 175 i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e 254 (370)
..+|+.-++-|+|||++++...+..+. ..+.+.+...+... |.-
T Consensus 134 -----------------------~~~l~~~~~~LkpgG~l~~~~~~~~~~-------~~~~~~~~~~~~~~---~~~--- 177 (279)
T 3ccf_A 134 -----------------------EAAIASIHQALKSGGRFVAEFGGKGNI-------KYILEALYNALETL---GIH--- 177 (279)
T ss_dssp -----------------------HHHHHHHHHHEEEEEEEEEEEECTTTT-------HHHHHHHHHHHHHH---TCC---
T ss_pred -----------------------HHHHHHHHHhcCCCcEEEEEecCCcch-------HHHHHHHHHHHHhc---CCc---
Confidence 126777788999999999998865432 12344444444333 321
Q ss_pred hhccCCcCcccCCHHHHHHHHHhcCceEEEEEEEEeecccccccCccccccccccccccchhhhhhHhhhhhHHHHhhCh
Q 017514 255 KVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQNGFKFNEAVDAFNDGGYNVANCMRAVAEPLLVSQFGE 334 (370)
Q Consensus 255 ~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~~~~w~~~~~~~~~~D~~~~~~~~a~~~a~~~RA~~epll~~hfg~ 334 (370)
......|+++++.+++...+++.| |++..++.+..++.. . ...+.+..|++++..+++.. +++
T Consensus 178 -~~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~~~~~~~-~-------------~~~~~~~~~l~~~~~~~~~~-~~~ 240 (279)
T 3ccf_A 178 -NPQALNPWYFPSIGEYVNILEKQG-FDVTYAALFNRPTTL-A-------------EGEFGMANWIQMFASAFLVG-LTP 240 (279)
T ss_dssp -CGGGGCCCCCCCHHHHHHHHHHHT-EEEEEEEEEECCEEC-S-------------SGGGHHHHHHHHHCHHHHTT-CCH
T ss_pred -cccCcCceeCCCHHHHHHHHHHcC-CEEEEEEEecccccc-c-------------CCHHHHHHHHHHhhHHHhcc-CCH
Confidence 233456788899999999999999 999888877655332 1 01235667777776666543 788
Q ss_pred hHHHHHHHHHHHHHHhhhh
Q 017514 335 AIIDELFKRYREIVADRMS 353 (370)
Q Consensus 335 ~i~Delf~r~~~~v~~~~~ 353 (370)
+..+++.+++.+.+.+...
T Consensus 241 ~~~~~~~~~~~~~~~~~~~ 259 (279)
T 3ccf_A 241 DQQVQLIRKVEATLQDKLY 259 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHE
T ss_pred HHHHHHHHHHHHHHHhhcc
Confidence 8888888888888877654
|
| >2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.46 E-value=3.2e-12 Score=117.76 Aligned_cols=230 Identities=13% Similarity=0.138 Sum_probs=138.1
Q ss_pred CchhHhhhHHHHHHHHHhHHHHHHHHHhhcccCCCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEe
Q 017514 15 GTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFL 94 (370)
Q Consensus 15 ~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~ 94 (370)
...|.+.+..|...... .+..+. .....+|+|+|||+|..+..+. +++ |..+|+.
T Consensus 8 ~~~y~~~~~~~~~~~~~-------l~~~~~---~~~~~~vLdiG~G~G~~~~~l~--------~~~-------~~~~v~~ 62 (259)
T 2p35_A 8 AQQYLKFEDERTRPARD-------LLAQVP---LERVLNGYDLGCGPGNSTELLT--------DRY-------GVNVITG 62 (259)
T ss_dssp CGGGBCCCCGGGHHHHH-------HHTTCC---CSCCSSEEEETCTTTHHHHHHH--------HHH-------CTTSEEE
T ss_pred HHHHHHHHHHHHHHHHH-------HHHhcC---CCCCCEEEEecCcCCHHHHHHH--------HhC-------CCCEEEE
Confidence 36788888877665532 222221 2345799999999999988665 332 3467888
Q ss_pred CCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCce
Q 017514 95 NDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGN 174 (370)
Q Consensus 95 nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~ 174 (370)
.|+. +.......+. .. +-.|..+ ++. .+.|++++|+++|+.++||+..
T Consensus 63 ~D~s-----------~~~~~~a~~~-~~-----~~~~~~~---d~~-~~~~~~~fD~v~~~~~l~~~~~----------- 110 (259)
T 2p35_A 63 IDSD-----------DDMLEKAADR-LP-----NTNFGKA---DLA-TWKPAQKADLLYANAVFQWVPD----------- 110 (259)
T ss_dssp EESC-----------HHHHHHHHHH-ST-----TSEEEEC---CTT-TCCCSSCEEEEEEESCGGGSTT-----------
T ss_pred EECC-----------HHHHHHHHHh-CC-----CcEEEEC---Chh-hcCccCCcCEEEEeCchhhCCC-----------
Confidence 8875 3333222222 11 2245444 553 3447889999999999999632
Q ss_pred eeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchh
Q 017514 175 IFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEE 254 (370)
Q Consensus 175 i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e 254 (370)
...+|+.-.+-|+|||++++..++.... .... .+.++...+.....
T Consensus 111 ----------------------~~~~l~~~~~~L~pgG~l~~~~~~~~~~--------~~~~----~~~~~~~~~~~~~~ 156 (259)
T 2p35_A 111 ----------------------HLAVLSQLMDQLESGGVLAVQMPDNLQE--------PTHI----AMHETADGGPWKDA 156 (259)
T ss_dssp ----------------------HHHHHHHHGGGEEEEEEEEEEEECCTTS--------HHHH----HHHHHHHHSTTGGG
T ss_pred ----------------------HHHHHHHHHHhcCCCeEEEEEeCCCCCc--------HHHH----HHHHHhcCcchHHH
Confidence 1236777789999999999998754221 1111 22222222111111
Q ss_pred hhccCCcCcccCCHHHHHHHHHhcCceEEEEEEEEeecccccccCccccccccccccccchhhhhhHhhh-hhHHHHhhC
Q 017514 255 KVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQNGFKFNEAVDAFNDGGYNVANCMRAVA-EPLLVSQFG 333 (370)
Q Consensus 255 ~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~~~~w~~~~~~~~~~D~~~~~~~~a~~~a~~~RA~~-epll~~hfg 333 (370)
.......+..+++.+++.+.+++.| |+|+..+... .+ .+ .....+..++++.. .+++ ..++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~~-~~-~~--------------~~~~~~~~~l~~~~~~~~~-~~~~ 218 (259)
T 2p35_A 157 FSGGGLRRKPLPPPSDYFNALSPKS-SRVDVWHTVY-NH-PM--------------KDADSIVEWVKGTGLRPYL-AAAG 218 (259)
T ss_dssp C-------CCCCCHHHHHHHHGGGE-EEEEEEEEEE-EE-EE--------------SCHHHHHHHHTTTTTTHHH-HTTC
T ss_pred hccccccccCCCCHHHHHHHHHhcC-CceEEEEEEe-ee-cc--------------CCchHHhhhhhcCcchHHH-HhCC
Confidence 1111123567789999999999999 8876555321 11 11 11245566666653 3444 4588
Q ss_pred hhHHHHHHHHHHHHHHhhhh
Q 017514 334 EAIIDELFKRYREIVADRMS 353 (370)
Q Consensus 334 ~~i~Delf~r~~~~v~~~~~ 353 (370)
++..+++.+++.+.+.+.+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~ 238 (259)
T 2p35_A 219 EENREAFLADYTRRIAAAYP 238 (259)
T ss_dssp GGGHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHhCC
Confidence 88889999999888887654
|
| >2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A | Back alignment and structure |
|---|
Probab=99.34 E-value=5.1e-11 Score=109.76 Aligned_cols=222 Identities=12% Similarity=0.130 Sum_probs=135.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
...+|+|+|||+|..+..+. +. ..+|+..|+. +.......+...... .+-
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~--------~~---------~~~v~~vD~s-----------~~~~~~a~~~~~~~~--~~~ 88 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLI--------AR---------GYRYIALDAD-----------AAMLEVFRQKIAGVD--RKV 88 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHH--------TT---------TCEEEEEESC-----------HHHHHHHHHHTTTSC--TTE
T ss_pred CCCEEEEeCCcCCHHHHHHH--------HC---------CCEEEEEECC-----------HHHHHHHHHHhhccC--Cce
Confidence 45799999999999988665 21 2567788874 333222222211100 022
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
.|..+ ++..--+|++++|+++++.++||+... ..+|+.-.+-|+
T Consensus 89 ~~~~~---d~~~~~~~~~~fD~v~~~~~l~~~~~~---------------------------------~~~l~~~~~~L~ 132 (263)
T 2yqz_A 89 QVVQA---DARAIPLPDESVHGVIVVHLWHLVPDW---------------------------------PKVLAEAIRVLK 132 (263)
T ss_dssp EEEES---CTTSCCSCTTCEEEEEEESCGGGCTTH---------------------------------HHHHHHHHHHEE
T ss_pred EEEEc---ccccCCCCCCCeeEEEECCchhhcCCH---------------------------------HHHHHHHHHHCC
Confidence 44433 664433678999999999999996431 126667788899
Q ss_pred cCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEEE
Q 017514 210 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 289 (370)
Q Consensus 210 ~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~ 289 (370)
|||++++.+...+ . +.. ......+...+..+ |. + ...+....+.+++...+++.| |++...+..
T Consensus 133 pgG~l~~~~~~~~-~---~~~-~~~~~~~~~~~~~~---~~-~------~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~ 196 (263)
T 2yqz_A 133 PGGALLEGWDQAE-A---SPE-WTLQERWRAFAAEE---GF-P------VERGLHAKRLKEVEEALRRLG-LKPRTREVA 196 (263)
T ss_dssp EEEEEEEEEEEEC-C---CHH-HHHHHHHHHHHHHH---TC-C------CCCCHHHHHHHHHHHHHHHTT-CCCEEEEEE
T ss_pred CCcEEEEEecCCC-c---cHH-HHHHHHHHHHHHHh---CC-C------cccccccCCHHHHHHHHHHcC-CCcceEEEe
Confidence 9999999944321 1 100 01223333333222 31 0 122456778999999999999 987766544
Q ss_pred eecccccccCccccccccccccccchhhhhhHhhhhhHHHHhhChhHHHHHHHHHHHHHHhhhhhcCC---cEEEEEEEE
Q 017514 290 EVNWNAYQNGFKFNEAVDAFNDGGYNVANCMRAVAEPLLVSQFGEAIIDELFKRYREIVADRMSKEKT---KFINVTVSL 366 (370)
Q Consensus 290 ~~~w~~~~~~~~~~D~~~~~~~~a~~~a~~~RA~~epll~~hfg~~i~Delf~r~~~~v~~~~~~~~~---~~~~~~~~L 366 (370)
+|... ...+.+..++++.+.+.+ .+++++..+++.+++.+.+.+.+..... -+..++++.
T Consensus 197 --~~~~~--------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 259 (263)
T 2yqz_A 197 --RWREE--------------RTPREALEALSERLYSFT-QGLPEPVHARVMERLWAWAEAELGDLDRPFPVEKRFLLRV 259 (263)
T ss_dssp --EEEEE--------------ECHHHHHHHHHTTCSGGG-SSSCHHHHHHHHHHHHHHHHHHSSCTTSCEEEEEEEEEEE
T ss_pred --eeecC--------------CCHHHHHHHHHHhhcccc-cCCCHHHHHHHHHHHHHHHHHhcCCcCccccccceeEEEe
Confidence 34321 112345556665555544 4578888888899998888877543222 246677777
Q ss_pred EecC
Q 017514 367 TKIG 370 (370)
Q Consensus 367 ~r~~ 370 (370)
.||+
T Consensus 260 ~rkp 263 (263)
T 2yqz_A 260 SRLG 263 (263)
T ss_dssp EECC
T ss_pred eecC
Confidence 8875
|
| >3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei} | Back alignment and structure |
|---|
Probab=99.24 E-value=1e-09 Score=99.64 Aligned_cols=173 Identities=15% Similarity=0.123 Sum_probs=115.1
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (370)
.+..+|+|+|||+|..+..+. +.+ |..+++.-|+. +...+...+...... +
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~--------~~~-------~~~~v~~vD~s-----------~~~~~~a~~~~~~~~---~ 93 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLM--------EKY-------PEATFTLVDMS-----------EKMLEIAKNRFRGNL---K 93 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHH--------HHC-------TTCEEEEEESC-----------HHHHHHHHHHTCSCT---T
T ss_pred CCCCeEEEecCCCCHHHHHHH--------HhC-------CCCeEEEEECC-----------HHHHHHHHHhhccCC---C
Confidence 456899999999999887666 331 45788888985 333333322222110 1
Q ss_pred ceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
-.|+. +++.. +.+++++|+++++.++||+.. | +...+|+.-.+-|
T Consensus 94 ~~~~~---~d~~~-~~~~~~fD~v~~~~~l~~~~~-~------------------------------~~~~~l~~~~~~L 138 (234)
T 3dtn_A 94 VKYIE---ADYSK-YDFEEKYDMVVSALSIHHLED-E------------------------------DKKELYKRSYSIL 138 (234)
T ss_dssp EEEEE---SCTTT-CCCCSCEEEEEEESCGGGSCH-H------------------------------HHHHHHHHHHHHE
T ss_pred EEEEe---Cchhc-cCCCCCceEEEEeCccccCCH-H------------------------------HHHHHHHHHHHhc
Confidence 23433 47643 444499999999999999633 1 2234677778899
Q ss_pred ccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCC---cCcccCCHHHHHHHHHhcCceEEEE
Q 017514 209 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFN---IPQYTPSPAEIKSEVIKEGSFTIDH 285 (370)
Q Consensus 209 ~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~---~P~y~~s~eE~~~~ie~~GsF~i~~ 285 (370)
+|||++++.....++. ..........|.....++-++.+++..+. --.+.++.+|+.+.+++.| |++.+
T Consensus 139 kpgG~l~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG-F~~v~ 210 (234)
T 3dtn_A 139 KESGIFINADLVHGET-------AFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQLNWLKEAG-FRDVS 210 (234)
T ss_dssp EEEEEEEEEEECBCSS-------HHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHHHHHHHTT-CEEEE
T ss_pred CCCcEEEEEEecCCCC-------hhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHHHHHHHcC-CCcee
Confidence 9999999998766543 12345556677777777667776655421 2335579999999999999 98877
Q ss_pred EEEEeecc
Q 017514 286 LEVSEVNW 293 (370)
Q Consensus 286 le~~~~~w 293 (370)
+.....+|
T Consensus 211 ~~~~~~~~ 218 (234)
T 3dtn_A 211 CIYKYYQF 218 (234)
T ss_dssp EEEEETTE
T ss_pred eeeeecce
Confidence 76655443
|
| >3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes} | Back alignment and structure |
|---|
Probab=99.15 E-value=2.8e-09 Score=98.95 Aligned_cols=153 Identities=13% Similarity=0.044 Sum_probs=96.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~ 126 (370)
...+|+|+|||+|..+..+. +.+ ..+|+.-|+. +.......+ ..+...
T Consensus 61 ~~~~vLDiGcG~G~~~~~l~--------~~~--------~~~v~gvD~s-----------~~~~~~a~~~~~~~~~~~-- 111 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRLA--------TAR--------DVRVTGISIS-----------RPQVNQANARATAAGLAN-- 111 (273)
T ss_dssp TTCEEEEESCTTSHHHHHHH--------HHS--------CCEEEEEESC-----------HHHHHHHHHHHHHTTCTT--
T ss_pred CCCEEEEeCCCCCHHHHHHH--------Hhc--------CCEEEEEeCC-----------HHHHHHHHHHHHhcCCCc--
Confidence 45799999999999888666 221 2577777774 222111111 112110
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
+-.|.. +++..--+|++++|+++|..++||+... ..+|+.-.+
T Consensus 112 -~~~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~~---------------------------------~~~l~~~~~ 154 (273)
T 3bus_A 112 -RVTFSY---ADAMDLPFEDASFDAVWALESLHHMPDR---------------------------------GRALREMAR 154 (273)
T ss_dssp -TEEEEE---CCTTSCCSCTTCEEEEEEESCTTTSSCH---------------------------------HHHHHHHHT
T ss_pred -ceEEEE---CccccCCCCCCCccEEEEechhhhCCCH---------------------------------HHHHHHHHH
Confidence 224433 3665544678999999999999996331 136777789
Q ss_pred hhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEE
Q 017514 207 ELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHL 286 (370)
Q Consensus 207 EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~l 286 (370)
-|+|||++++..+...+... .. . ...+..+. ..+ ...+.++.+++.+.+++.| |++.+.
T Consensus 155 ~L~pgG~l~i~~~~~~~~~~--~~----~---~~~~~~~~----------~~~-~~~~~~~~~~~~~~l~~aG-f~~~~~ 213 (273)
T 3bus_A 155 VLRPGGTVAIADFVLLAPVE--GA----K---KEAVDAFR----------AGG-GVLSLGGIDEYESDVRQAE-LVVTST 213 (273)
T ss_dssp TEEEEEEEEEEEEEESSCCC--HH----H---HHHHHHHH----------HHH-TCCCCCCHHHHHHHHHHTT-CEEEEE
T ss_pred HcCCCeEEEEEEeeccCCCC--hh----H---HHHHHHHH----------hhc-CccCCCCHHHHHHHHHHcC-CeEEEE
Confidence 99999999999887654311 11 1 11111111 001 1235689999999999999 998877
Q ss_pred EEE
Q 017514 287 EVS 289 (370)
Q Consensus 287 e~~ 289 (370)
+.+
T Consensus 214 ~~~ 216 (273)
T 3bus_A 214 VDI 216 (273)
T ss_dssp EEC
T ss_pred EEC
Confidence 765
|
| >3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=2.6e-08 Score=94.32 Aligned_cols=223 Identities=12% Similarity=0.131 Sum_probs=130.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHh---hCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQ---LGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~---~~~~~~~ 126 (370)
...+|+|+|||+|..++.+. +++ + .+|+.-|+- +.......+. .+...
T Consensus 72 ~~~~vLDiGcG~G~~~~~la--------~~~-------~-~~v~gvD~s-----------~~~~~~a~~~~~~~~~~~-- 122 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAV--------AEY-------D-VNVIGLTLS-----------ENQYAHDKAMFDEVDSPR-- 122 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HHH-------C-CEEEEEECC-----------HHHHHHHHHHHHHSCCSS--
T ss_pred CcCEEEEeeccCcHHHHHHH--------HhC-------C-CEEEEEECC-----------HHHHHHHHHHHHhcCCCC--
Confidence 34799999999999988766 332 3 678888874 3222222111 12110
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
+-.|..+ ++ ..+ ++++|+++|..++|++.+ |+.... .+++..+|+.-.+
T Consensus 123 -~v~~~~~---d~-~~~--~~~fD~v~~~~~~~~~~d-~~~~~~-----------------------~~~~~~~l~~~~~ 171 (302)
T 3hem_A 123 -RKEVRIQ---GW-EEF--DEPVDRIVSLGAFEHFAD-GAGDAG-----------------------FERYDTFFKKFYN 171 (302)
T ss_dssp -CEEEEEC---CG-GGC--CCCCSEEEEESCGGGTTC-CSSCCC-----------------------TTHHHHHHHHHHH
T ss_pred -ceEEEEC---CH-HHc--CCCccEEEEcchHHhcCc-cccccc-----------------------hhHHHHHHHHHHH
Confidence 1234444 55 334 789999999999999766 321100 0356668888899
Q ss_pred hhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCc-ccCCHHHHHHHHHhcCceEEEE
Q 017514 207 ELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQ-YTPSPAEIKSEVIKEGSFTIDH 285 (370)
Q Consensus 207 EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~-y~~s~eE~~~~ie~~GsF~i~~ 285 (370)
-|+|||++++...+..+.... ......+..-...+.+.. ....+|. +.|+.+++...+++.| |++..
T Consensus 172 ~LkpgG~l~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----------~~~~~p~~~~~s~~~~~~~l~~aG-f~~~~ 239 (302)
T 3hem_A 172 LTPDDGRMLLHTITIPDKEEA-QELGLTSPMSLLRFIKFI----------LTEIFPGGRLPRISQVDYYSSNAG-WKVER 239 (302)
T ss_dssp SSCTTCEEEEEEEECCCHHHH-HHHTCCCCHHHHHHHHHH----------HHHTCTTCCCCCHHHHHHHHHHHT-CEEEE
T ss_pred hcCCCcEEEEEEEeccCccch-hhccccccccccchHHHH----------HHhcCCCCCCCCHHHHHHHHHhCC-cEEEE
Confidence 999999999998876532100 000000000001111111 1223343 6789999999999999 98888
Q ss_pred EEEEeecccccccCccccccccccccccchhhhhhHhhhh--hHHHHhhChhHHHHHHHHHHHHHHhhhhhcCCcEEEEE
Q 017514 286 LEVSEVNWNAYQNGFKFNEAVDAFNDGGYNVANCMRAVAE--PLLVSQFGEAIIDELFKRYREIVADRMSKEKTKFINVT 363 (370)
Q Consensus 286 le~~~~~w~~~~~~~~~~D~~~~~~~~a~~~a~~~RA~~e--pll~~hfg~~i~Delf~r~~~~v~~~~~~~~~~~~~~~ 363 (370)
++.+.. .+++.+..|.+.+-. +-+.+.++++..+ .|..|-.-.+..+........+++
T Consensus 240 ~~~~~~-------------------~y~~tl~~w~~~~~~~~~~~~~~~~~~~~~-~w~~yl~~~~~~f~~~~~~~~q~~ 299 (302)
T 3hem_A 240 YHRIGA-------------------NYVPTLNAWADALQAHKDEAIALKGQETCD-IYMHYLRGCSDLFRDKYTDVCQFT 299 (302)
T ss_dssp EEECGG-------------------GHHHHHHHHHHHHHHTHHHHHHHHCHHHHH-HHHHHHHHHHHHHHTTSSEEEEEE
T ss_pred EEeCch-------------------hHHHHHHHHHHHHHHhHHHHHHHhCHHHHH-HHHHHHHHHHHHHhCCCCeEEEEE
Confidence 765421 123333333333222 2233447766665 577777777777777877777755
Q ss_pred E
Q 017514 364 V 364 (370)
Q Consensus 364 ~ 364 (370)
+
T Consensus 300 ~ 300 (302)
T 3hem_A 300 L 300 (302)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=2.9e-08 Score=91.13 Aligned_cols=152 Identities=11% Similarity=0.103 Sum_probs=98.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
...+|+|+|||+|..+..+. +++ ..+|+.-|+. +.......+...... +-
T Consensus 55 ~~~~vLdiG~G~G~~~~~l~--------~~~--------~~~v~~vD~s-----------~~~~~~a~~~~~~~~---~~ 104 (266)
T 3ujc_A 55 ENSKVLDIGSGLGGGCMYIN--------EKY--------GAHTHGIDIC-----------SNIVNMANERVSGNN---KI 104 (266)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HHH--------CCEEEEEESC-----------HHHHHHHHHTCCSCT---TE
T ss_pred CCCEEEEECCCCCHHHHHHH--------HHc--------CCEEEEEeCC-----------HHHHHHHHHHhhcCC---Ce
Confidence 45799999999999988766 321 1577788875 333222222211100 22
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
.|..+ ++..--+|++++|++++..++||++. .|...+|+.-.+-|+
T Consensus 105 ~~~~~---d~~~~~~~~~~fD~v~~~~~l~~~~~-------------------------------~~~~~~l~~~~~~L~ 150 (266)
T 3ujc_A 105 IFEAN---DILTKEFPENNFDLIYSRDAILALSL-------------------------------ENKNKLFQKCYKWLK 150 (266)
T ss_dssp EEEEC---CTTTCCCCTTCEEEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHHEE
T ss_pred EEEEC---ccccCCCCCCcEEEEeHHHHHHhcCh-------------------------------HHHHHHHHHHHHHcC
Confidence 44444 66444567899999999999999621 344567888889999
Q ss_pred cCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEEE
Q 017514 210 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 289 (370)
Q Consensus 210 ~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~ 289 (370)
|||++++..+......+.. ..+...+.. . ....++.+++...+++.| |++.+.+.+
T Consensus 151 pgG~l~~~~~~~~~~~~~~-------~~~~~~~~~---~-------------~~~~~~~~~~~~~l~~~G-f~~~~~~~~ 206 (266)
T 3ujc_A 151 PTGTLLITDYCATEKENWD-------DEFKEYVKQ---R-------------KYTLITVEEYADILTACN-FKNVVSKDL 206 (266)
T ss_dssp EEEEEEEEEEEESCGGGCC-------HHHHHHHHH---H-------------TCCCCCHHHHHHHHHHTT-CEEEEEEEC
T ss_pred CCCEEEEEEeccCCcccch-------HHHHHHHhc---C-------------CCCCCCHHHHHHHHHHcC-CeEEEEEeC
Confidence 9999999988766421111 111111111 1 124678999999999999 988776654
|
| >3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=3.1e-08 Score=90.87 Aligned_cols=208 Identities=18% Similarity=0.132 Sum_probs=123.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~ 126 (370)
...+|+|+|||+|..+..+. +.+ + .+|+..|+- +.......+ ..+...
T Consensus 46 ~~~~vLDiG~G~G~~~~~l~--------~~~-------~-~~v~~vD~s-----------~~~~~~a~~~~~~~~~~~-- 96 (257)
T 3f4k_A 46 DDAKIADIGCGTGGQTLFLA--------DYV-------K-GQITGIDLF-----------PDFIEIFNENAVKANCAD-- 96 (257)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HHC-------C-SEEEEEESC-----------HHHHHHHHHHHHHTTCTT--
T ss_pred CCCeEEEeCCCCCHHHHHHH--------HhC-------C-CeEEEEECC-----------HHHHHHHHHHHHHcCCCC--
Confidence 34699999999999888766 331 3 378888874 222221111 112110
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
+-.|..+ ++..--+|++++|++++..++||+ . |. .+|+.-.+
T Consensus 97 -~~~~~~~---d~~~~~~~~~~fD~v~~~~~l~~~-~-~~--------------------------------~~l~~~~~ 138 (257)
T 3f4k_A 97 -RVKGITG---SMDNLPFQNEELDLIWSEGAIYNI-G-FE--------------------------------RGMNEWSK 138 (257)
T ss_dssp -TEEEEEC---CTTSCSSCTTCEEEEEEESCSCCC-C-HH--------------------------------HHHHHHHT
T ss_pred -ceEEEEC---ChhhCCCCCCCEEEEEecChHhhc-C-HH--------------------------------HHHHHHHH
Confidence 1244444 663333578999999999999996 2 11 15666778
Q ss_pred hhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEE
Q 017514 207 ELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHL 286 (370)
Q Consensus 207 EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~l 286 (370)
-|+|||++++..+......+. ..+...|... .| ..++.+++...+++.| |++...
T Consensus 139 ~L~pgG~l~~~~~~~~~~~~~--------~~~~~~~~~~---------------~~-~~~~~~~~~~~l~~aG-f~~v~~ 193 (257)
T 3f4k_A 139 YLKKGGFIAVSEASWFTSERP--------AEIEDFWMDA---------------YP-EISVIPTCIDKMERAG-YTPTAH 193 (257)
T ss_dssp TEEEEEEEEEEEEEESSSCCC--------HHHHHHHHHH---------------CT-TCCBHHHHHHHHHHTT-EEEEEE
T ss_pred HcCCCcEEEEEEeeccCCCCh--------HHHHHHHHHh---------------CC-CCCCHHHHHHHHHHCC-CeEEEE
Confidence 899999999998764433221 1223334321 12 1568999999999999 988775
Q ss_pred EEEee-cccccccCccccccccccccccchhhhhhHhhhhhHHHHhhChhHHHHHHHHHHHHHHhhhhhcCCcEEEEEEE
Q 017514 287 EVSEV-NWNAYQNGFKFNEAVDAFNDGGYNVANCMRAVAEPLLVSQFGEAIIDELFKRYREIVADRMSKEKTKFINVTVS 365 (370)
Q Consensus 287 e~~~~-~w~~~~~~~~~~D~~~~~~~~a~~~a~~~RA~~epll~~hfg~~i~Delf~r~~~~v~~~~~~~~~~~~~~~~~ 365 (370)
..+.. .|. ..+....+...+.+...+-+....+++.++..+....+ ......+--.+++
T Consensus 194 ~~~~~~~w~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~v 253 (257)
T 3f4k_A 194 FILPENCWT-------------------EHYFAPQDEVRETFMKEHAGNKTAMDFMKGQQYERSLY-SKYKDYYGYVFYI 253 (257)
T ss_dssp EECCGGGTC-------------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-HHHTTTEEEEEEE
T ss_pred EECChhhHH-------------------HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHhCCccceEEEE
Confidence 54421 232 11122233334444555556666677766666655533 3445555566677
Q ss_pred EEec
Q 017514 366 LTKI 369 (370)
Q Consensus 366 L~r~ 369 (370)
++|+
T Consensus 254 ~~k~ 257 (257)
T 3f4k_A 254 GQKR 257 (257)
T ss_dssp EEEC
T ss_pred EecC
Confidence 7664
|
| >3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=5.1e-08 Score=90.45 Aligned_cols=149 Identities=18% Similarity=0.156 Sum_probs=96.6
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASG 125 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~ 125 (370)
+...+|+|+|||+|..++.+. +. +..+|+.-|+. +.......+ ..+...
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la--------~~--------~~~~v~gvD~s-----------~~~~~~a~~~~~~~~~~~- 96 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLA--------GH--------VTGQVTGLDFL-----------SGFIDIFNRNARQSGLQN- 96 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHH--------TT--------CSSEEEEEESC-----------HHHHHHHHHHHHHTTCTT-
T ss_pred CCCCEEEEeCCCCCHHHHHHH--------hc--------cCCEEEEEeCC-----------HHHHHHHHHHHHHcCCCc-
Confidence 346899999999999888666 21 44688888885 222222111 112110
Q ss_pred CCCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 126 AAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRS 205 (370)
Q Consensus 126 ~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra 205 (370)
+-.|..+ ++.+--+|++++|+++|..++|++ . | ..+|+.-.
T Consensus 97 --~v~~~~~---d~~~~~~~~~~fD~i~~~~~~~~~-~-~--------------------------------~~~l~~~~ 137 (267)
T 3kkz_A 97 --RVTGIVG---SMDDLPFRNEELDLIWSEGAIYNI-G-F--------------------------------ERGLNEWR 137 (267)
T ss_dssp --TEEEEEC---CTTSCCCCTTCEEEEEESSCGGGT-C-H--------------------------------HHHHHHHG
T ss_pred --CcEEEEc---ChhhCCCCCCCEEEEEEcCCceec-C-H--------------------------------HHHHHHHH
Confidence 2344444 663333578999999999999997 2 1 11677778
Q ss_pred HhhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEE
Q 017514 206 EELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDH 285 (370)
Q Consensus 206 ~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~ 285 (370)
+-|+|||++++..+......+. ..+...|.+- .| ..++.+++.+.+++.| |++..
T Consensus 138 ~~LkpgG~l~~~~~~~~~~~~~--------~~~~~~~~~~---------------~~-~~~~~~~~~~~l~~aG-f~~v~ 192 (267)
T 3kkz_A 138 KYLKKGGYLAVSECSWFTDERP--------AEINDFWMDA---------------YP-EIDTIPNQVAKIHKAG-YLPVA 192 (267)
T ss_dssp GGEEEEEEEEEEEEEESSSCCC--------HHHHHHHHHH---------------CT-TCEEHHHHHHHHHHTT-EEEEE
T ss_pred HHcCCCCEEEEEEeeecCCCCh--------HHHHHHHHHh---------------CC-CCCCHHHHHHHHHHCC-CEEEE
Confidence 8999999999998765433221 1223333211 12 4578999999999999 99887
Q ss_pred EEEE
Q 017514 286 LEVS 289 (370)
Q Consensus 286 le~~ 289 (370)
.+.+
T Consensus 193 ~~~~ 196 (267)
T 3kkz_A 193 TFIL 196 (267)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 7654
|
| >2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=4.6e-09 Score=99.32 Aligned_cols=157 Identities=12% Similarity=0.146 Sum_probs=92.2
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcc--eEEeCCCCCCchHHHHHhhHHHHHHHHHhhCC--CC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEF--QVFLNDLPGNDFNTIFRSLASFQKILRKQLGS--AS 124 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i--~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~--~~ 124 (370)
....+|+|+|||+|..|+.++..+ ..++ |.. .++..|.. +.+....++.... ..
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l----~~~~-------~~~~v~~~~vD~S-----------~~ml~~a~~~~~~~~~~ 108 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKV----QAQY-------PGVCINNEVVEPS-----------AEQIAKYKELVAKTSNL 108 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHH----HHHS-------TTCEEEEEEECSC-----------HHHHHHHHHHHHTCSSC
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHH----HhhC-------CCceeeEEEEeCC-----------HHHHHHHHHHHHhccCC
Confidence 346899999999998776555433 2221 234 44888875 4433333222111 11
Q ss_pred CCCCce-EEeecCCCccccc-------CCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHH
Q 017514 125 GAAGQC-FFTGVPGSFYGRL-------FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRD 196 (370)
Q Consensus 125 ~~~~~~-f~~~vpgSFy~~l-------~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D 196 (370)
.++ |... .++. +.+ ++++++|+++++.+|||+.+.+
T Consensus 109 ---~~v~~~~~-~~~~-~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d~~------------------------------- 152 (292)
T 2aot_A 109 ---ENVKFAWH-KETS-SEYQSRMLEKKELQKWDFIHMIQMLYYVKDIP------------------------------- 152 (292)
T ss_dssp ---TTEEEEEE-CSCH-HHHHHHHHTTTCCCCEEEEEEESCGGGCSCHH-------------------------------
T ss_pred ---CcceEEEE-ecch-hhhhhhhccccCCCceeEEEEeeeeeecCCHH-------------------------------
Confidence 122 2222 2233 122 5689999999999999965421
Q ss_pred HHHHHHHHHHhhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHH
Q 017514 197 FSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVI 276 (370)
Q Consensus 197 ~~~fL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie 276 (370)
.+|+.-++-|+|||++++.....+. .|. ..|..... . +.. .-...+++++++...++
T Consensus 153 --~~l~~~~r~LkpgG~l~i~~~~~~~----------~~~---~~~~~~~~-~-~~~------~~~~~~~~~~~~~~~l~ 209 (292)
T 2aot_A 153 --ATLKFFHSLLGTNAKMLIIVVSGSS----------GWD---KLWKKYGS-R-FPQ------DDLCQYITSDDLTQMLD 209 (292)
T ss_dssp --HHHHHHHHTEEEEEEEEEEEECTTS----------HHH---HHHHHHGG-G-SCC------CTTCCCCCHHHHHHHHH
T ss_pred --HHHHHHHHHcCCCcEEEEEEecCCc----------cHH---HHHHHHHH-h-ccC------CCcccCCCHHHHHHHHH
Confidence 2566778899999999999764321 122 12222211 0 000 01235688999999999
Q ss_pred hcCceEEEEEE
Q 017514 277 KEGSFTIDHLE 287 (370)
Q Consensus 277 ~~GsF~i~~le 287 (370)
+.| |++....
T Consensus 210 ~aG-f~~~~~~ 219 (292)
T 2aot_A 210 NLG-LKYECYD 219 (292)
T ss_dssp HHT-CCEEEEE
T ss_pred HCC-CceEEEE
Confidence 999 8876533
|
| >3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=98.98 E-value=7.3e-09 Score=91.90 Aligned_cols=143 Identities=15% Similarity=0.145 Sum_probs=99.2
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCce
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (370)
..+|+|+|||+|..+..+. +. ..+|+.-|+- +.......+. .. +-.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~gvD~s-----------~~~~~~a~~~-~~-----~~~ 87 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLA--------SL---------GHQIEGLEPA-----------TRLVELARQT-HP-----SVT 87 (203)
T ss_dssp CSCEEEETCTTCHHHHHHH--------HT---------TCCEEEECCC-----------HHHHHHHHHH-CT-----TSE
T ss_pred CCeEEEecCCCCHHHHHHH--------hc---------CCeEEEEeCC-----------HHHHHHHHHh-CC-----CCe
Confidence 4789999999999887665 21 1467777874 3322222222 11 224
Q ss_pred EEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 017514 131 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 210 (370)
Q Consensus 131 f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~ 210 (370)
|..+ ++..--+|++++|+++++.++||+.. +|...+|+.-++-|+|
T Consensus 88 ~~~~---d~~~~~~~~~~fD~v~~~~~l~~~~~-------------------------------~~~~~~l~~~~~~L~p 133 (203)
T 3h2b_A 88 FHHG---TITDLSDSPKRWAGLLAWYSLIHMGP-------------------------------GELPDALVALRMAVED 133 (203)
T ss_dssp EECC---CGGGGGGSCCCEEEEEEESSSTTCCT-------------------------------TTHHHHHHHHHHTEEE
T ss_pred EEeC---cccccccCCCCeEEEEehhhHhcCCH-------------------------------HHHHHHHHHHHHHcCC
Confidence 4444 66443467899999999999999642 1334478888899999
Q ss_pred CceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEEEe
Q 017514 211 EGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSE 290 (370)
Q Consensus 211 GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~~ 290 (370)
||++++..+..... ..+.....+.+..+.+|++..+++.| |++.+++.+.
T Consensus 134 gG~l~i~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~ 183 (203)
T 3h2b_A 134 GGGLLMSFFSGPSL-----------------------------EPMYHPVATAYRWPLPELAQALETAG-FQVTSSHWDP 183 (203)
T ss_dssp EEEEEEEEECCSSC-----------------------------EEECCSSSCEEECCHHHHHHHHHHTT-EEEEEEEECT
T ss_pred CcEEEEEEccCCch-----------------------------hhhhchhhhhccCCHHHHHHHHHHCC-CcEEEEEecC
Confidence 99999998765531 11222344678889999999999999 9999888764
Q ss_pred e
Q 017514 291 V 291 (370)
Q Consensus 291 ~ 291 (370)
.
T Consensus 184 ~ 184 (203)
T 3h2b_A 184 R 184 (203)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.9e-08 Score=90.53 Aligned_cols=178 Identities=16% Similarity=0.079 Sum_probs=106.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCC-CCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGS-ASGAAG 128 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~-~~~~~~ 128 (370)
...+|+|+|||+|..+..+. +. ..+|+.-|+. +.......+.... ......
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~--------~~---------~~~v~~vD~s-----------~~~~~~a~~~~~~~~~~~~~ 81 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELA--------SK---------GYSVTGIDIN-----------SEAIRLAETAARSPGLNQKT 81 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HT---------TCEEEEEESC-----------HHHHHHHHHHTTCCSCCSSS
T ss_pred CCCeEEEECCCCCHHHHHHH--------hC---------CCeEEEEECC-----------HHHHHHHHHHHHhcCCcccc
Confidence 45799999999999887665 21 2578888875 3322222222111 000000
Q ss_pred ceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
.--+..+.+++..--+|++++|+++++.++|++.. | .++..+|+.-.+-|
T Consensus 82 ~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~-~-----------------------------~~~~~~l~~~~~~L 131 (235)
T 3sm3_A 82 GGKAEFKVENASSLSFHDSSFDFAVMQAFLTSVPD-P-----------------------------KERSRIIKEVFRVL 131 (235)
T ss_dssp SCEEEEEECCTTSCCSCTTCEEEEEEESCGGGCCC-H-----------------------------HHHHHHHHHHHHHE
T ss_pred CcceEEEEecccccCCCCCceeEEEEcchhhcCCC-H-----------------------------HHHHHHHHHHHHHc
Confidence 00112233355444467899999999999999644 1 12334777788999
Q ss_pred ccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccC--CcCcccCCHHHHHHHHHhcCceEEEEE
Q 017514 209 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCF--NIPQYTPSPAEIKSEVIKEGSFTIDHL 286 (370)
Q Consensus 209 ~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f--~~P~y~~s~eE~~~~ie~~GsF~i~~l 286 (370)
+|||++++..++.....+ .........+.....+|.......... ....++++.+|++..+++.| |++.++
T Consensus 132 ~pgG~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aG-f~~~~~ 204 (235)
T 3sm3_A 132 KPGAYLYLVEFGQNWHLK------LYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTEKELVFLLTDCR-FEIDYF 204 (235)
T ss_dssp EEEEEEEEEEEBCCTTSH------HHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCHHHHHHHHHTTT-EEEEEE
T ss_pred CCCeEEEEEECCcchhHH------HHHHHhhhhccchhhhcceEecccccCCcceeeEeCCHHHHHHHHHHcC-CEEEEE
Confidence 999999999987754321 122223333333333332221111111 23346789999999999999 999998
Q ss_pred EEEeec
Q 017514 287 EVSEVN 292 (370)
Q Consensus 287 e~~~~~ 292 (370)
+....+
T Consensus 205 ~~~~~~ 210 (235)
T 3sm3_A 205 RVKELE 210 (235)
T ss_dssp EEEEEE
T ss_pred Eeccee
Confidence 876543
|
| >3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian} | Back alignment and structure |
|---|
Probab=98.95 E-value=1.1e-08 Score=91.85 Aligned_cols=162 Identities=14% Similarity=0.187 Sum_probs=101.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
...+|+|+|||+|..+..+. ++ ..+++.-|+. +.......+.... +-
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~~vD~s-----------~~~~~~a~~~~~~-----~~ 91 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLL--------LA---------GRTVYGIEPS-----------REMRMIAKEKLPK-----EF 91 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHH--------HT---------TCEEEEECSC-----------HHHHHHHHHHSCT-----TC
T ss_pred CCCeEEEeCCCCCHHHHHHH--------hC---------CCeEEEEeCC-----------HHHHHHHHHhCCC-----ce
Confidence 35799999999999887665 21 2578888875 3332222222221 12
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
.|.. +++..--++ +++|++++..++||+.. | +...+|+.-.+-|+
T Consensus 92 ~~~~---~d~~~~~~~-~~fD~v~~~~~l~~~~~-~------------------------------~~~~~l~~~~~~Lk 136 (220)
T 3hnr_A 92 SITE---GDFLSFEVP-TSIDTIVSTYAFHHLTD-D------------------------------EKNVAIAKYSQLLN 136 (220)
T ss_dssp CEES---CCSSSCCCC-SCCSEEEEESCGGGSCH-H------------------------------HHHHHHHHHHHHSC
T ss_pred EEEe---CChhhcCCC-CCeEEEEECcchhcCCh-H------------------------------HHHHHHHHHHHhcC
Confidence 3433 366443345 99999999999999643 1 11336777788999
Q ss_pred cCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEEE
Q 017514 210 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 289 (370)
Q Consensus 210 ~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~ 289 (370)
|||++++..+...+. ......+..+...|.... ..-..+.++++.++++..+++.| |+|...+..
T Consensus 137 pgG~l~i~~~~~~~~-----------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~ 201 (220)
T 3hnr_A 137 KGGKIVFADTIFADQ-----------DAYDKTVEAAKQRGFHQL---ANDLQTEYYTRIPVMQTIFENNG-FHVTFTRLN 201 (220)
T ss_dssp TTCEEEEEEECBSSH-----------HHHHHHHHHHHHTTCHHH---HHHHHHSCCCBHHHHHHHHHHTT-EEEEEEECS
T ss_pred CCCEEEEEeccccCh-----------HHHHHHHHHHHhCCCccc---hhhcchhhcCCHHHHHHHHHHCC-CEEEEeecc
Confidence 999999997654432 112223333333443211 11123356779999999999999 998888766
Q ss_pred eeccc
Q 017514 290 EVNWN 294 (370)
Q Consensus 290 ~~~w~ 294 (370)
...|-
T Consensus 202 ~~~w~ 206 (220)
T 3hnr_A 202 HFVWV 206 (220)
T ss_dssp SSEEE
T ss_pred ceEEE
Confidence 55553
|
| >3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei} | Back alignment and structure |
|---|
Probab=98.94 E-value=1.8e-08 Score=93.71 Aligned_cols=160 Identities=19% Similarity=0.218 Sum_probs=97.7
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHh---hCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQ---LGSASG 125 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~---~~~~~~ 125 (370)
+...+|+|+|||+|..+..+. +.. |..+|+.-|+- +.......+. .+..
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~--------~~~-------~~~~v~~vD~s-----------~~~~~~a~~~~~~~~~~-- 87 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILA--------KNN-------PDAEITSIDIS-----------PESLEKARENTEKNGIK-- 87 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHH--------HHC-------TTSEEEEEESC-----------HHHHHHHHHHHHHTTCC--
T ss_pred CCCCeEEEecCCCCHHHHHHH--------HhC-------CCCEEEEEECC-----------HHHHHHHHHHHHHcCCC--
Confidence 456799999999998887665 321 45788888875 2222221111 1211
Q ss_pred CCCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 126 AAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRS 205 (370)
Q Consensus 126 ~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra 205 (370)
+-.|..+ +...-.+|++++|+++++.++||+...+ .+|+.-.
T Consensus 88 --~~~~~~~---d~~~~~~~~~~fD~v~~~~~l~~~~~~~---------------------------------~~l~~~~ 129 (276)
T 3mgg_A 88 --NVKFLQA---NIFSLPFEDSSFDHIFVCFVLEHLQSPE---------------------------------EALKSLK 129 (276)
T ss_dssp --SEEEEEC---CGGGCCSCTTCEEEEEEESCGGGCSCHH---------------------------------HHHHHHH
T ss_pred --CcEEEEc---ccccCCCCCCCeeEEEEechhhhcCCHH---------------------------------HHHHHHH
Confidence 2234333 6655557889999999999999964411 2566667
Q ss_pred HhhccCceEEEEeeccCCCC--CCCchhhhHHHHHHHHHHHHH-hcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceE
Q 017514 206 EELVAEGRMVLTFLGRKSQD--PSSKECCYIWELLATALNNMV-SEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFT 282 (370)
Q Consensus 206 ~EL~~GG~lvl~~~g~~~~~--~~~~~~~~~~~~l~~al~~mv-~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~ 282 (370)
+-|+|||.+++......... +.... ..... ..+..+. ..| ....+.+++...+++.| |+
T Consensus 130 ~~L~pgG~l~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~-------------~~~~~~~~l~~~l~~aG-f~ 191 (276)
T 3mgg_A 130 KVLKPGGTITVIEGDHGSCYFHPEGKK---AIEAW-NCLIRVQAYMK-------------GNSLVGRQIYPLLQESG-FE 191 (276)
T ss_dssp HHEEEEEEEEEEEECGGGCEEESCCHH---HHHHH-HHHHHHHHHTT-------------CCTTGGGGHHHHHHHTT-CE
T ss_pred HHcCCCcEEEEEEcCCCCceECCCcHH---HHHHH-HHHHHHHHhcC-------------CCcchHHHHHHHHHHCC-CC
Confidence 88999999999876543321 11111 11111 2222211 111 12235689999999999 99
Q ss_pred EEEEEEEeec
Q 017514 283 IDHLEVSEVN 292 (370)
Q Consensus 283 i~~le~~~~~ 292 (370)
+..++....+
T Consensus 192 ~v~~~~~~~~ 201 (276)
T 3mgg_A 192 KIRVEPRMVY 201 (276)
T ss_dssp EEEEEEEEEE
T ss_pred eEEEeeEEEE
Confidence 9888876544
|
| >4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.91 E-value=7.2e-09 Score=97.20 Aligned_cols=167 Identities=18% Similarity=0.248 Sum_probs=100.8
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhC-CCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLG-SASGAA 127 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~-~~~~~~ 127 (370)
++..+|+|+|||+|..+..+. +. ..+|+..|+- +.......+... ... ..
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~gvD~s-----------~~~~~~a~~~~~~~~~-~~ 117 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMA--------ER---------GHQVILCDLS-----------AQMIDRAKQAAEAKGV-SD 117 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHH--------HT---------TCEEEEEESC-----------HHHHHHHHHHHHC-CC-GG
T ss_pred CCCCEEEEeCCcchHHHHHHH--------HC---------CCEEEEEECC-----------HHHHHHHHHHHHhcCC-Cc
Confidence 345799999999999887665 21 2578888874 322222221111 000 00
Q ss_pred CceEEeecCCCccccc-CCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 128 GQCFFTGVPGSFYGRL-FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l-~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
+-.|+.+ ++..-. ++++++|++++..++||+... ..+|+.-++
T Consensus 118 ~v~~~~~---d~~~~~~~~~~~fD~v~~~~~l~~~~~~---------------------------------~~~l~~~~~ 161 (285)
T 4htf_A 118 NMQFIHC---AAQDVASHLETPVDLILFHAVLEWVADP---------------------------------RSVLQTLWS 161 (285)
T ss_dssp GEEEEES---CGGGTGGGCSSCEEEEEEESCGGGCSCH---------------------------------HHHHHHHHH
T ss_pred ceEEEEc---CHHHhhhhcCCCceEEEECchhhcccCH---------------------------------HHHHHHHHH
Confidence 1234444 664433 588999999999999996331 126777789
Q ss_pred hhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEE
Q 017514 207 ELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHL 286 (370)
Q Consensus 207 EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~l 286 (370)
-|+|||++++........ .....+...|..+ ..+..... .....|.++.+++|++..+++.| |++...
T Consensus 162 ~LkpgG~l~~~~~~~~~~--------~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~aG-f~v~~~ 229 (285)
T 4htf_A 162 VLRPGGVLSLMFYNAHGL--------LMHNMVAGNFDYV-QAGMPKKK--KRTLSPDYPRDPTQVYLWLEEAG-WQIMGK 229 (285)
T ss_dssp TEEEEEEEEEEEEBHHHH--------HHHHHHTTCHHHH-HTTCCCC------CCCSCCBCHHHHHHHHHHTT-CEEEEE
T ss_pred HcCCCeEEEEEEeCCchH--------HHHHHHhcCHHHH-hhhccccc--cccCCCCCCCCHHHHHHHHHHCC-Cceeee
Confidence 999999999998764321 0111111112221 22221111 11234567789999999999999 999888
Q ss_pred EEEeec
Q 017514 287 EVSEVN 292 (370)
Q Consensus 287 e~~~~~ 292 (370)
+.+...
T Consensus 230 ~~~~~~ 235 (285)
T 4htf_A 230 TGVRVF 235 (285)
T ss_dssp EEESSS
T ss_pred eeEEEe
Confidence 877544
|
| >4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=1.6e-08 Score=94.99 Aligned_cols=164 Identities=20% Similarity=0.239 Sum_probs=96.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
..-+|+|+|||+|..++.+. +++ ..|..+|+--|+- +...+.-++.... .+...+
T Consensus 70 ~~~~vLDlGcGtG~~~~~la--------~~~-----~~~~~~v~gvD~s-----------~~ml~~A~~~~~~-~~~~~~ 124 (261)
T 4gek_A 70 PGTQVYDLGCSLGAATLSVR--------RNI-----HHDNCKIIAIDNS-----------PAMIERCRRHIDA-YKAPTP 124 (261)
T ss_dssp TTCEEEEETCTTTHHHHHHH--------HTC-----CSSSCEEEEEESC-----------HHHHHHHHHHHHT-SCCSSC
T ss_pred CCCEEEEEeCCCCHHHHHHH--------Hhc-----CCCCCEEEEEECC-----------HHHHHHHHHHHHh-hccCce
Confidence 34799999999999888665 332 2355889999986 4443333222111 000022
Q ss_pred -eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 130 -CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 130 -~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
-|+.| ++. . +|..+.|+++++++|||+.. .|...+|+.-++-|
T Consensus 125 v~~~~~---D~~-~-~~~~~~d~v~~~~~l~~~~~-------------------------------~~~~~~l~~i~~~L 168 (261)
T 4gek_A 125 VDVIEG---DIR-D-IAIENASMVVLNFTLQFLEP-------------------------------SERQALLDKIYQGL 168 (261)
T ss_dssp EEEEES---CTT-T-CCCCSEEEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHHE
T ss_pred EEEeec---ccc-c-ccccccccceeeeeeeecCc-------------------------------hhHhHHHHHHHHHc
Confidence 34444 663 2 46677999999999999632 23445788888999
Q ss_pred ccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHh-cCCcchhhhc----cCCcCcccCCHHHHHHHHHhcCceEE
Q 017514 209 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVS-EGLIEEEKVN----CFNIPQYTPSPAEIKSEVIKEGSFTI 283 (370)
Q Consensus 209 ~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~-eG~i~~e~~d----~f~~P~y~~s~eE~~~~ie~~GsF~i 283 (370)
+|||+|++.-...... ....+.+...+.+... .|. ++.++. ...-.....|.+|++..+++.| |+-
T Consensus 169 kpGG~lii~e~~~~~~-------~~~~~~~~~~~~~~~~~~g~-s~~ei~~~~~~l~~~~~~~s~~~~~~~L~~AG-F~~ 239 (261)
T 4gek_A 169 NPGGALVLSEKFSFED-------AKVGELLFNMHHDFKRANGY-SELEISQKRSMLENVMLTDSVETHKARLHKAG-FEH 239 (261)
T ss_dssp EEEEEEEEEEEBCCSS-------HHHHHHHHHHHHHHHHHTTG-GGSTTHHHHHHHHHHCCCBCHHHHHHHHHHHT-CSE
T ss_pred CCCcEEEEEeccCCCC-------HHHHHHHHHHHHHHHHHcCC-CHHHHHHHHhhhcccccCCCHHHHHHHHHHcC-CCe
Confidence 9999999975544332 1122333333333322 232 222111 1111223468999999999999 864
|
| >3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=2.5e-08 Score=88.85 Aligned_cols=160 Identities=14% Similarity=0.138 Sum_probs=95.1
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCce
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (370)
..+|+|+|||+|..+..+. +. ..+|+.-|+. +.......+ .+.. +-.
T Consensus 47 ~~~vLdiG~G~G~~~~~l~--------~~---------~~~v~~~D~s-----------~~~~~~a~~-~~~~----~~~ 93 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHLS--------GL---------ADRVTALDGS-----------AEMIAEAGR-HGLD----NVE 93 (218)
T ss_dssp CSEEEEESCTTSHHHHHHH--------HH---------SSEEEEEESC-----------HHHHHHHGG-GCCT----TEE
T ss_pred CCeEEEECCCCCHHHHHHH--------hc---------CCeEEEEeCC-----------HHHHHHHHh-cCCC----CeE
Confidence 3599999999999887665 22 1577777874 332222211 2211 234
Q ss_pred EEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 017514 131 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 210 (370)
Q Consensus 131 f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~ 210 (370)
|..+ ++. .++|++++|+++++.++||+.. .++..+|+.-.+-|+|
T Consensus 94 ~~~~---d~~-~~~~~~~~D~v~~~~~l~~~~~-------------------------------~~~~~~l~~~~~~L~p 138 (218)
T 3ou2_A 94 FRQQ---DLF-DWTPDRQWDAVFFAHWLAHVPD-------------------------------DRFEAFWESVRSAVAP 138 (218)
T ss_dssp EEEC---CTT-SCCCSSCEEEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHHEEE
T ss_pred EEec---ccc-cCCCCCceeEEEEechhhcCCH-------------------------------HHHHHHHHHHHHHcCC
Confidence 4444 664 4489999999999999999543 1234478888899999
Q ss_pred CceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEEEe
Q 017514 211 EGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSE 290 (370)
Q Consensus 211 GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~~ 290 (370)
||++++...++.... ....+......... ..+.. -..+.....+++++|+.+.+++.| |+++..+...
T Consensus 139 gG~l~~~~~~~~~~~--------~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~~ 206 (218)
T 3ou2_A 139 GGVVEFVDVTDHERR--------LEQQDDSEPEVAVR-RTLQD--GRSFRIVKVFRSPAELTERLTALG-WSCSVDEVHP 206 (218)
T ss_dssp EEEEEEEEECCCC--------------------CEEE-EECTT--SCEEEEECCCCCHHHHHHHHHHTT-EEEEEEEEET
T ss_pred CeEEEEEeCCCCccc--------cchhhhccccccee-eecCC--cchhhHhhcCCCHHHHHHHHHHCC-CEEEeeeccc
Confidence 999999998773221 11111100000000 00000 001111233679999999999999 9987777653
|
| >2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18 | Back alignment and structure |
|---|
Probab=98.87 E-value=1.6e-07 Score=88.40 Aligned_cols=150 Identities=15% Similarity=0.064 Sum_probs=95.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~ 126 (370)
...+|+|+|||+|..+..+. +.+ + .+|+.-|+. +.......+ ..+...
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~--------~~~-------~-~~v~gvD~s-----------~~~~~~a~~~~~~~~~~~-- 132 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLV--------RKF-------G-VSIDCLNIA-----------PVQNKRNEEYNNQAGLAD-- 132 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HHH-------C-CEEEEEESC-----------HHHHHHHHHHHHHHTCTT--
T ss_pred CCCEEEEeCCCCCHHHHHHH--------HHh-------C-CEEEEEeCC-----------HHHHHHHHHHHHhcCCCc--
Confidence 45799999999999888665 322 1 477787875 222111111 112110
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
+-.|.. +++..--+|++++|++++..++||+.. | ..+|+.-.+
T Consensus 133 -~~~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~-~--------------------------------~~~l~~~~~ 175 (297)
T 2o57_A 133 -NITVKY---GSFLEIPCEDNSYDFIWSQDAFLHSPD-K--------------------------------LKVFQECAR 175 (297)
T ss_dssp -TEEEEE---CCTTSCSSCTTCEEEEEEESCGGGCSC-H--------------------------------HHHHHHHHH
T ss_pred -ceEEEE---cCcccCCCCCCCEeEEEecchhhhcCC-H--------------------------------HHHHHHHHH
Confidence 223433 366554467899999999999999644 1 126777788
Q ss_pred hhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEE
Q 017514 207 ELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHL 286 (370)
Q Consensus 207 EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~l 286 (370)
-|+|||++++..+...+..+. . .+...+..+ ..| ..++.+++...+++.| |++.+.
T Consensus 176 ~LkpgG~l~~~~~~~~~~~~~-~-------~~~~~~~~~--------------~~~-~~~~~~~~~~~l~~aG-f~~~~~ 231 (297)
T 2o57_A 176 VLKPRGVMAITDPMKEDGIDK-S-------SIQPILDRI--------------KLH-DMGSLGLYRSLAKECG-LVTLRT 231 (297)
T ss_dssp HEEEEEEEEEEEEEECTTCCG-G-------GGHHHHHHH--------------TCS-SCCCHHHHHHHHHHTT-EEEEEE
T ss_pred HcCCCeEEEEEEeccCCCCch-H-------HHHHHHHHh--------------cCC-CCCCHHHHHHHHHHCC-CeEEEE
Confidence 999999999998876543221 1 111112111 122 3569999999999999 988777
Q ss_pred EEE
Q 017514 287 EVS 289 (370)
Q Consensus 287 e~~ 289 (370)
+.+
T Consensus 232 ~~~ 234 (297)
T 2o57_A 232 FSR 234 (297)
T ss_dssp EEC
T ss_pred EEC
Confidence 654
|
| >1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=3.6e-07 Score=85.50 Aligned_cols=160 Identities=13% Similarity=0.213 Sum_probs=93.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhh---CCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL---GSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~---~~~~~~ 126 (370)
...+|+|+|||+|..+..+. +.. + .+|+.-|+- +...+...+.. +...
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~--------~~~-------~-~~v~gvd~s-----------~~~~~~a~~~~~~~~~~~-- 114 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRAV--------EKY-------D-VNVVGLTLS-----------KNQANHVQQLVANSENLR-- 114 (287)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HHH-------C-CEEEEEESC-----------HHHHHHHHHHHHTCCCCS--
T ss_pred CcCEEEEECCcccHHHHHHH--------HHc-------C-CEEEEEECC-----------HHHHHHHHHHHHhcCCCC--
Confidence 35799999999999887665 322 2 377777874 32222221111 1110
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
+-.|..+ ++ .. +| +++|+++|..++|++.. .|+..+|+.-.+
T Consensus 115 -~~~~~~~---d~-~~-~~-~~fD~v~~~~~l~~~~~-------------------------------~~~~~~l~~~~~ 156 (287)
T 1kpg_A 115 -SKRVLLA---GW-EQ-FD-EPVDRIVSIGAFEHFGH-------------------------------ERYDAFFSLAHR 156 (287)
T ss_dssp -CEEEEES---CG-GG-CC-CCCSEEEEESCGGGTCT-------------------------------TTHHHHHHHHHH
T ss_pred -CeEEEEC---Ch-hh-CC-CCeeEEEEeCchhhcCh-------------------------------HHHHHHHHHHHH
Confidence 1233333 55 33 35 89999999999999642 123347777788
Q ss_pred hhccCceEEEEeeccCCCCCC-CchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcC-cccCCHHHHHHHHHhcCceEEE
Q 017514 207 ELVAEGRMVLTFLGRKSQDPS-SKECCYIWELLATALNNMVSEGLIEEEKVNCFNIP-QYTPSPAEIKSEVIKEGSFTID 284 (370)
Q Consensus 207 EL~~GG~lvl~~~g~~~~~~~-~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P-~y~~s~eE~~~~ie~~GsF~i~ 284 (370)
-|+|||++++..+...+.... .......+. ...+.+..... ..| ...++.+++...+++.| |++.
T Consensus 157 ~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~----------~~~~~~~~s~~~~~~~l~~aG-f~~~ 223 (287)
T 1kpg_A 157 LLPADGVMLLHTITGLHPKEIHERGLPMSFT--FARFLKFIVTE----------IFPGGRLPSIPMVQECASANG-FTVT 223 (287)
T ss_dssp HSCTTCEEEEEEEEECCHHHHTTTTCSCHHH--HHHHHHHHHHH----------TSTTCCCCCHHHHHHHHHTTT-CEEE
T ss_pred hcCCCCEEEEEEecCCCcccccccccccccc--ccchhhhHHhe----------eCCCCCCCCHHHHHHHHHhCC-cEEE
Confidence 999999999998876542100 000000000 01111111111 112 24579999999999999 9988
Q ss_pred EEEEE
Q 017514 285 HLEVS 289 (370)
Q Consensus 285 ~le~~ 289 (370)
+.+.+
T Consensus 224 ~~~~~ 228 (287)
T 1kpg_A 224 RVQSL 228 (287)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 77654
|
| >3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=98.86 E-value=4.7e-08 Score=88.88 Aligned_cols=144 Identities=17% Similarity=0.175 Sum_probs=95.4
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCce
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (370)
..+|+|+|||+|..+..+. + +..+|+.-|+- +.......+.........+-.
T Consensus 67 ~~~vLDiGcG~G~~~~~l~--------~---------~~~~v~gvD~s-----------~~~~~~a~~~~~~~~~~~~v~ 118 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMA--------S---------PERFVVGLDIS-----------ESALAKANETYGSSPKAEYFS 118 (235)
T ss_dssp CEEEEEETCTTCHHHHHHC--------B---------TTEEEEEECSC-----------HHHHHHHHHHHTTSGGGGGEE
T ss_pred CCCEEEeCCCCCHHHHHHH--------h---------CCCeEEEEECC-----------HHHHHHHHHHhhccCCCcceE
Confidence 3599999999999887554 1 23678888875 332222222211100000123
Q ss_pred EEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 017514 131 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 210 (370)
Q Consensus 131 f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~ 210 (370)
|. .+++. .+.|++++|+++++.++||+. + .|...+|+.-++-|+|
T Consensus 119 ~~---~~d~~-~~~~~~~fD~v~~~~~l~~~~---~----------------------------~~~~~~l~~~~~~Lkp 163 (235)
T 3lcc_A 119 FV---KEDVF-TWRPTELFDLIFDYVFFCAIE---P----------------------------EMRPAWAKSMYELLKP 163 (235)
T ss_dssp EE---CCCTT-TCCCSSCEEEEEEESSTTTSC---G----------------------------GGHHHHHHHHHHHEEE
T ss_pred EE---ECchh-cCCCCCCeeEEEEChhhhcCC---H----------------------------HHHHHHHHHHHHHCCC
Confidence 43 34663 466888999999999999964 1 2334577777889999
Q ss_pred CceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEEEe
Q 017514 211 EGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSE 290 (370)
Q Consensus 211 GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~~ 290 (370)
||++++........ ..-|.+..+.++++..+++.| |++..++...
T Consensus 164 gG~l~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~ 208 (235)
T 3lcc_A 164 DGELITLMYPITDH----------------------------------VGGPPYKVDVSTFEEVLVPIG-FKAVSVEENP 208 (235)
T ss_dssp EEEEEEEECCCSCC----------------------------------CSCSSCCCCHHHHHHHHGGGT-EEEEEEEECT
T ss_pred CcEEEEEEeccccc----------------------------------CCCCCccCCHHHHHHHHHHcC-CeEEEEEecC
Confidence 99999977654321 112445689999999999999 9998888765
Q ss_pred ec
Q 017514 291 VN 292 (370)
Q Consensus 291 ~~ 292 (370)
.+
T Consensus 209 ~~ 210 (235)
T 3lcc_A 209 HA 210 (235)
T ss_dssp TC
T ss_pred Cc
Confidence 43
|
| >1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36 | Back alignment and structure |
|---|
Probab=98.80 E-value=6.3e-08 Score=86.91 Aligned_cols=159 Identities=9% Similarity=0.105 Sum_probs=98.3
Q ss_pred HHHHHHHHHhhcccCCCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHH
Q 017514 33 KPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASF 112 (370)
Q Consensus 33 ~~~l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~ 112 (370)
.|.+.+.+..+.. +...+|+|+|||+|.++..+. ++ | .+|+--|+- +..
T Consensus 8 ~~~l~~~~~~l~~---~~~~~vLD~GCG~G~~~~~la--------~~----g-----~~V~gvD~S-----------~~~ 56 (203)
T 1pjz_A 8 NKDLQQYWSSLNV---VPGARVLVPLCGKSQDMSWLS--------GQ----G-----YHVVGAELS-----------EAA 56 (203)
T ss_dssp THHHHHHHHHHCC---CTTCEEEETTTCCSHHHHHHH--------HH----C-----CEEEEEEEC-----------HHH
T ss_pred CHHHHHHHHhccc---CCCCEEEEeCCCCcHhHHHHH--------HC----C-----CeEEEEeCC-----------HHH
Confidence 3455555554432 345799999999999988765 32 2 578888875 444
Q ss_pred HHHHHHhhCCCC-----------CCCCceEEeecCCCcccccCCC-CceeEEEeccccccccCCCCCccCCCceeeecCC
Q 017514 113 QKILRKQLGSAS-----------GAAGQCFFTGVPGSFYGRLFPR-NSVHLFHSSYSLQWLSQVPDGLESNKGNIFMAST 180 (370)
Q Consensus 113 ~~~~~~~~~~~~-----------~~~~~~f~~~vpgSFy~~l~p~-~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~ 180 (370)
.....++..... ...+-.|..| ++..--+++ +++|++++..++|++..
T Consensus 57 l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---d~~~l~~~~~~~fD~v~~~~~l~~l~~----------------- 116 (203)
T 1pjz_A 57 VERYFTERGEQPHITSQGDFKVYAAPGIEIWCG---DFFALTARDIGHCAAFYDRAAMIALPA----------------- 116 (203)
T ss_dssp HHHHHHHHCSCSEEEEETTEEEEECSSSEEEEE---CCSSSTHHHHHSEEEEEEESCGGGSCH-----------------
T ss_pred HHHHHHHccCCcccccccccccccCCccEEEEC---ccccCCcccCCCEEEEEECcchhhCCH-----------------
Confidence 333333222100 0002245554 664322333 79999999999999631
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCC
Q 017514 181 SPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFN 260 (370)
Q Consensus 181 s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~ 260 (370)
.|...+|+.-++-|+|||++++.....+.. ...
T Consensus 117 --------------~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~---------------------------------~~~ 149 (203)
T 1pjz_A 117 --------------DMRERYVQHLEALMPQACSGLLITLEYDQA---------------------------------LLE 149 (203)
T ss_dssp --------------HHHHHHHHHHHHHSCSEEEEEEEEESSCSS---------------------------------SSS
T ss_pred --------------HHHHHHHHHHHHHcCCCcEEEEEEEecCcc---------------------------------ccC
Confidence 133446777789999999966665432210 011
Q ss_pred cCcccCCHHHHHHHHHhcCceEEEEEEEEee
Q 017514 261 IPQYTPSPAEIKSEVIKEGSFTIDHLEVSEV 291 (370)
Q Consensus 261 ~P~y~~s~eE~~~~ie~~GsF~i~~le~~~~ 291 (370)
-|.+..+.+|++..+++ | |+++.++....
T Consensus 150 ~~~~~~~~~el~~~~~~-g-f~i~~~~~~~~ 178 (203)
T 1pjz_A 150 GPPFSVPQTWLHRVMSG-N-WEVTKVGGQDT 178 (203)
T ss_dssp SCCCCCCHHHHHHTSCS-S-EEEEEEEESSC
T ss_pred CCCCCCCHHHHHHHhcC-C-cEEEEeccccc
Confidence 23455789999999998 7 99988886653
|
| >3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.79 E-value=9.7e-08 Score=87.17 Aligned_cols=144 Identities=16% Similarity=0.122 Sum_probs=93.7
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (370)
+...+|+|+|||+|..+..+. +. + .+|+.-|+- +.......+ .
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~--------~~----~-----~~v~gvD~s-----------~~~~~~a~~---------~ 82 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCK--------EE----G-----IESIGVDIN-----------EDMIKFCEG---------K 82 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHH--------HH----T-----CCEEEECSC-----------HHHHHHHHT---------T
T ss_pred cCCCeEEEEeCCCCHHHHHHH--------hC----C-----CcEEEEECC-----------HHHHHHHHh---------h
Confidence 345799999999999876554 22 1 457777874 322221111 1
Q ss_pred ceEEeecCCCcccc--cCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 129 QCFFTGVPGSFYGR--LFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 129 ~~f~~~vpgSFy~~--l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
--| +.++...- -+|++++|+++|+.++||+.. .|+..+|+.-.+
T Consensus 83 ~~~---~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~-------------------------------~~~~~~l~~~~~ 128 (240)
T 3dli_A 83 FNV---VKSDAIEYLKSLPDKYLDGVMISHFVEHLDP-------------------------------ERLFELLSLCYS 128 (240)
T ss_dssp SEE---ECSCHHHHHHTSCTTCBSEEEEESCGGGSCG-------------------------------GGHHHHHHHHHH
T ss_pred cce---eeccHHHHhhhcCCCCeeEEEECCchhhCCc-------------------------------HHHHHHHHHHHH
Confidence 122 23354332 358899999999999999642 244557888889
Q ss_pred hhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEE
Q 017514 207 ELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHL 286 (370)
Q Consensus 207 EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~l 286 (370)
-|+|||++++..++... ... +...+ + ..-..+.++.++++..+++.| |++...
T Consensus 129 ~LkpgG~l~~~~~~~~~----------~~~-~~~~~--------~-------~~~~~~~~~~~~l~~~l~~aG-f~~~~~ 181 (240)
T 3dli_A 129 KMKYSSYIVIESPNPTS----------LYS-LINFY--------I-------DPTHKKPVHPETLKFILEYLG-FRDVKI 181 (240)
T ss_dssp HBCTTCCEEEEEECTTS----------HHH-HHHHT--------T-------STTCCSCCCHHHHHHHHHHHT-CEEEEE
T ss_pred HcCCCcEEEEEeCCcch----------hHH-HHHHh--------c-------CccccccCCHHHHHHHHHHCC-CeEEEE
Confidence 99999999998876331 111 11111 0 111245678899999999999 998888
Q ss_pred EEEe
Q 017514 287 EVSE 290 (370)
Q Consensus 287 e~~~ 290 (370)
+.+.
T Consensus 182 ~~~~ 185 (240)
T 3dli_A 182 EFFE 185 (240)
T ss_dssp EEEC
T ss_pred EEec
Confidence 7763
|
| >1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41 | Back alignment and structure |
|---|
Probab=98.77 E-value=6.8e-08 Score=89.14 Aligned_cols=154 Identities=12% Similarity=0.131 Sum_probs=95.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHh---hCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQ---LGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~---~~~~~~~ 126 (370)
...+|+|+|||+|..+..+. ++ + -+|+..|+. +.......+. .+..
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~--------~~----~-----~~v~gvD~s-----------~~~l~~a~~~~~~~~~~--- 85 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFA--------PF----V-----KKVVAFDLT-----------EDILKVARAFIEGNGHQ--- 85 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHG--------GG----S-----SEEEEEESC-----------HHHHHHHHHHHHHTTCC---
T ss_pred CCCEEEEEeCCCCHHHHHHH--------Hh----C-----CEEEEEeCC-----------HHHHHHHHHHHHhcCCC---
Confidence 45799999999999877554 22 1 278888874 3222221111 1211
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
+-.|..+ ++..--+|++++|+++|+.++||+...+ .+|+.-.+
T Consensus 86 -~v~~~~~---d~~~l~~~~~~fD~V~~~~~l~~~~d~~---------------------------------~~l~~~~r 128 (260)
T 1vl5_A 86 -QVEYVQG---DAEQMPFTDERFHIVTCRIAAHHFPNPA---------------------------------SFVSEAYR 128 (260)
T ss_dssp -SEEEEEC---CC-CCCSCTTCEEEEEEESCGGGCSCHH---------------------------------HHHHHHHH
T ss_pred -ceEEEEe---cHHhCCCCCCCEEEEEEhhhhHhcCCHH---------------------------------HHHHHHHH
Confidence 2244443 6644346889999999999999974311 25677788
Q ss_pred hhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEE
Q 017514 207 ELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHL 286 (370)
Q Consensus 207 EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~l 286 (370)
-|+|||++++.....++. .....+...+..+. + .......+.+++.+.+++.| |++..+
T Consensus 129 ~LkpgG~l~~~~~~~~~~--------~~~~~~~~~~~~~~----------~--~~~~~~~~~~~~~~~l~~aG-f~~~~~ 187 (260)
T 1vl5_A 129 VLKKGGQLLLVDNSAPEN--------DAFDVFYNYVEKER----------D--YSHHRAWKKSDWLKMLEEAG-FELEEL 187 (260)
T ss_dssp HEEEEEEEEEEEEEBCSS--------HHHHHHHHHHHHHH----------C--TTCCCCCBHHHHHHHHHHHT-CEEEEE
T ss_pred HcCCCCEEEEEEcCCCCC--------HHHHHHHHHHHHhc----------C--ccccCCCCHHHHHHHHHHCC-CeEEEE
Confidence 999999999987654432 11222222222111 1 11234568999999999999 998888
Q ss_pred EEEeec
Q 017514 287 EVSEVN 292 (370)
Q Consensus 287 e~~~~~ 292 (370)
+....+
T Consensus 188 ~~~~~~ 193 (260)
T 1vl5_A 188 HCFHKT 193 (260)
T ss_dssp EEEEEE
T ss_pred EEeecc
Confidence 876543
|
| >3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=98.76 E-value=1.2e-07 Score=85.92 Aligned_cols=148 Identities=16% Similarity=0.249 Sum_probs=95.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
...+|+|+|||+|..+..+. +. ..+|+.-|+. +.......+..... +-
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~--------~~---------~~~v~~vD~s-----------~~~~~~a~~~~~~~----~~ 100 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLS--------RT---------GYKAVGVDIS-----------EVMIQKGKERGEGP----DL 100 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HT---------TCEEEEEESC-----------HHHHHHHHTTTCBT----TE
T ss_pred CCCeEEEEcCCCCHHHHHHH--------Hc---------CCeEEEEECC-----------HHHHHHHHhhcccC----Cc
Confidence 35699999999999887665 21 2577788874 33222222211111 23
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
.|..+ ++..--+|++++|++++..++||+.. | ..+|+.-.+-|+
T Consensus 101 ~~~~~---d~~~~~~~~~~fD~v~~~~~l~~~~~-~--------------------------------~~~l~~~~~~L~ 144 (242)
T 3l8d_A 101 SFIKG---DLSSLPFENEQFEAIMAINSLEWTEE-P--------------------------------LRALNEIKRVLK 144 (242)
T ss_dssp EEEEC---BTTBCSSCTTCEEEEEEESCTTSSSC-H--------------------------------HHHHHHHHHHEE
T ss_pred eEEEc---chhcCCCCCCCccEEEEcChHhhccC-H--------------------------------HHHHHHHHHHhC
Confidence 44444 55444467899999999999999632 1 126777788999
Q ss_pred cCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEEE
Q 017514 210 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 289 (370)
Q Consensus 210 ~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~ 289 (370)
|||++++...+...... . ..+. ............++++++..+++.| |++.+.+.+
T Consensus 145 pgG~l~i~~~~~~~~~~-----~-------~~~~-----------~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~ 200 (242)
T 3l8d_A 145 SDGYACIAILGPTAKPR-----E-------NSYP-----------RLYGKDVVCNTMMPWEFEQLVKEQG-FKVVDGIGV 200 (242)
T ss_dssp EEEEEEEEEECTTCGGG-----G-------GGGG-----------GGGTCCCSSCCCCHHHHHHHHHHTT-EEEEEEEEE
T ss_pred CCeEEEEEEcCCcchhh-----h-------hhhh-----------hhccccccccCCCHHHHHHHHHHcC-CEEEEeecc
Confidence 99999999876543210 0 0000 0112233556689999999999999 999887755
|
| >4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans} | Back alignment and structure |
|---|
Probab=98.76 E-value=1.8e-07 Score=87.79 Aligned_cols=103 Identities=16% Similarity=0.146 Sum_probs=68.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
..-+|+|+|||+|..|..+. ++ + .+|+-.|+- +.. + +...... +-
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~--------~~----~-----~~v~gvD~s-----------~~m---l-~~a~~~~---~v 83 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLA--------EF----F-----ERVHAVDPG-----------EAQ---I-RQALRHP---RV 83 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHH--------TT----C-----SEEEEEESC-----------HHH---H-HTCCCCT---TE
T ss_pred CCCCEEEEcCCCCHHHHHHH--------Hh----C-----CEEEEEeCc-----------HHh---h-hhhhhcC---Cc
Confidence 34689999999999988665 22 1 467778864 221 1 1111111 22
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
.|..+ ++..--+|++|+|+++++.++||+.. + .||+.-++-|+
T Consensus 84 ~~~~~---~~e~~~~~~~sfD~v~~~~~~h~~~~-~---------------------------------~~~~e~~rvLk 126 (257)
T 4hg2_A 84 TYAVA---PAEDTGLPPASVDVAIAAQAMHWFDL-D---------------------------------RFWAELRRVAR 126 (257)
T ss_dssp EEEEC---CTTCCCCCSSCEEEEEECSCCTTCCH-H---------------------------------HHHHHHHHHEE
T ss_pred eeehh---hhhhhcccCCcccEEEEeeehhHhhH-H---------------------------------HHHHHHHHHcC
Confidence 45444 55333469999999999999999631 1 14555677899
Q ss_pred cCceEEEEeeccCCC
Q 017514 210 AEGRMVLTFLGRKSQ 224 (370)
Q Consensus 210 ~GG~lvl~~~g~~~~ 224 (370)
|||+|++...+....
T Consensus 127 pgG~l~~~~~~~~~~ 141 (257)
T 4hg2_A 127 PGAVFAAVTYGLTRV 141 (257)
T ss_dssp EEEEEEEEEECCCBC
T ss_pred CCCEEEEEECCCCCC
Confidence 999999998876654
|
| >3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=98.76 E-value=4.2e-08 Score=87.14 Aligned_cols=155 Identities=11% Similarity=0.058 Sum_probs=91.1
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~~ 127 (370)
.-+|+|+|||+|..+..+. ++ +..+++.-|+. +.......+ ..+...
T Consensus 44 ~~~vLdiG~G~G~~~~~l~--------~~--------~~~~v~~~D~s-----------~~~~~~a~~~~~~~~~~~--- 93 (219)
T 3dlc_A 44 AGTCIDIGSGPGALSIALA--------KQ--------SDFSIRALDFS-----------KHMNEIALKNIADANLND--- 93 (219)
T ss_dssp EEEEEEETCTTSHHHHHHH--------HH--------SEEEEEEEESC-----------HHHHHHHHHHHHHTTCTT---
T ss_pred CCEEEEECCCCCHHHHHHH--------Hc--------CCCeEEEEECC-----------HHHHHHHHHHHHhccccC---
Confidence 3499999999999887665 22 34788888874 222211111 112110
Q ss_pred CceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017514 128 GQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~E 207 (370)
+-.|..+ ++..--+|++++|+++++.++||+.. ...+|+.-.+-
T Consensus 94 ~~~~~~~---d~~~~~~~~~~~D~v~~~~~l~~~~~---------------------------------~~~~l~~~~~~ 137 (219)
T 3dlc_A 94 RIQIVQG---DVHNIPIEDNYADLIVSRGSVFFWED---------------------------------VATAFREIYRI 137 (219)
T ss_dssp TEEEEEC---BTTBCSSCTTCEEEEEEESCGGGCSC---------------------------------HHHHHHHHHHH
T ss_pred ceEEEEc---CHHHCCCCcccccEEEECchHhhccC---------------------------------HHHHHHHHHHh
Confidence 2244444 66443468899999999999999622 12267777889
Q ss_pred hccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEE
Q 017514 208 LVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLE 287 (370)
Q Consensus 208 L~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le 287 (370)
|+|||++++...-... .+.+.+...+.... .+. ...+.......+.++++..+++.| |++.++.
T Consensus 138 L~pgG~l~~~~~~~~~---------~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~l~~aG-f~~v~~~ 201 (219)
T 3dlc_A 138 LKSGGKTYIGGGFGNK---------ELRDSISAEMIRKN-PDW-----KEFNRKNISQENVERFQNVLDEIG-ISSYEII 201 (219)
T ss_dssp EEEEEEEEEEECCSSH---------HHHHHHHHHHHHHC-TTH-----HHHHHHHSSHHHHHHHHHHHHHHT-CSSEEEE
T ss_pred CCCCCEEEEEeccCcH---------HHHHHHHHHHHHhH-HHH-----HhhhhhccccCCHHHHHHHHHHcC-CCeEEEE
Confidence 9999999987532221 12233333332220 000 000111123348899999999999 8765554
|
| >3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=98.75 E-value=1.1e-07 Score=84.85 Aligned_cols=141 Identities=17% Similarity=0.187 Sum_probs=95.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
...+|+|+|||+|..+..+. +. ..+|+.-|+. +.......+..+.
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~~vD~s-----------~~~~~~a~~~~~~------- 87 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAML--------AA---------GFDVDATDGS-----------PELAAEASRRLGR------- 87 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHH--------HT---------TCEEEEEESC-----------HHHHHHHHHHHTS-------
T ss_pred CCCcEEEECCCCCHHHHHHH--------Hc---------CCeEEEECCC-----------HHHHHHHHHhcCC-------
Confidence 35799999999999887665 21 2577788874 3322222222121
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
.+.. +++ ..+.+++++|+++++.++|++.. .|+..+|+.-.+-|+
T Consensus 88 ~~~~---~d~-~~~~~~~~fD~v~~~~~l~~~~~-------------------------------~~~~~~l~~~~~~Lk 132 (211)
T 3e23_A 88 PVRT---MLF-HQLDAIDAYDAVWAHACLLHVPR-------------------------------DELADVLKLIWRALK 132 (211)
T ss_dssp CCEE---CCG-GGCCCCSCEEEEEECSCGGGSCH-------------------------------HHHHHHHHHHHHHEE
T ss_pred ceEE---eee-ccCCCCCcEEEEEecCchhhcCH-------------------------------HHHHHHHHHHHHhcC
Confidence 2222 355 34558999999999999999541 345567888889999
Q ss_pred cCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEEE
Q 017514 210 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 289 (370)
Q Consensus 210 ~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~ 289 (370)
|||++++.+....... .+.+...+.+.+.++++..+++.|.|++..++..
T Consensus 133 pgG~l~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~ 182 (211)
T 3e23_A 133 PGGLFYASYKSGEGEG------------------------------RDKLARYYNYPSEEWLRARYAEAGTWASVAVESS 182 (211)
T ss_dssp EEEEEEEEEECCSSCE------------------------------ECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEE
T ss_pred CCcEEEEEEcCCCccc------------------------------ccccchhccCCCHHHHHHHHHhCCCcEEEEEEec
Confidence 9999999976443221 1122334467899999999999987888777765
Q ss_pred e
Q 017514 290 E 290 (370)
Q Consensus 290 ~ 290 (370)
.
T Consensus 183 ~ 183 (211)
T 3e23_A 183 E 183 (211)
T ss_dssp E
T ss_pred c
Confidence 4
|
| >1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=4.2e-07 Score=83.04 Aligned_cols=155 Identities=14% Similarity=0.181 Sum_probs=95.0
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASG 125 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~ 125 (370)
....+|+|+|||+|..+..+. +. + -+|+..|+- +.......+ ..+..
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~--------~~----~-----~~v~~vD~s-----------~~~~~~a~~~~~~~~~~-- 69 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFS--------PY----V-----QECIGVDAT-----------KEMVEVASSFAQEKGVE-- 69 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHG--------GG----S-----SEEEEEESC-----------HHHHHHHHHHHHHHTCC--
T ss_pred CCCCEEEEEccCcCHHHHHHH--------Hh----C-----CEEEEEECC-----------HHHHHHHHHHHHHcCCC--
Confidence 345799999999999887654 21 1 267777764 222111111 11211
Q ss_pred CCCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 126 AAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRS 205 (370)
Q Consensus 126 ~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra 205 (370)
+-.|..+ ++..--+|++++|++++..++||+... ..+|+.-+
T Consensus 70 --~v~~~~~---d~~~~~~~~~~fD~v~~~~~l~~~~~~---------------------------------~~~l~~~~ 111 (239)
T 1xxl_A 70 --NVRFQQG---TAESLPFPDDSFDIITCRYAAHHFSDV---------------------------------RKAVREVA 111 (239)
T ss_dssp --SEEEEEC---BTTBCCSCTTCEEEEEEESCGGGCSCH---------------------------------HHHHHHHH
T ss_pred --CeEEEec---ccccCCCCCCcEEEEEECCchhhccCH---------------------------------HHHHHHHH
Confidence 2234333 554433678999999999999996431 12667778
Q ss_pred HhhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEE
Q 017514 206 EELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDH 285 (370)
Q Consensus 206 ~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~ 285 (370)
+-|+|||++++.....++. .....+.+.+..+. +. ......+.+++...+++.| |++..
T Consensus 112 ~~LkpgG~l~~~~~~~~~~--------~~~~~~~~~~~~~~----------~~--~~~~~~~~~~~~~ll~~aG-f~~~~ 170 (239)
T 1xxl_A 112 RVLKQDGRFLLVDHYAPED--------PVLDEFVNHLNRLR----------DP--SHVRESSLSEWQAMFSANQ-LAYQD 170 (239)
T ss_dssp HHEEEEEEEEEEEECBCSS--------HHHHHHHHHHHHHH----------CT--TCCCCCBHHHHHHHHHHTT-EEEEE
T ss_pred HHcCCCcEEEEEEcCCCCC--------hhHHHHHHHHHHhc----------cc--cccCCCCHHHHHHHHHHCC-CcEEE
Confidence 8999999999987654432 11222222222111 11 1123468999999999999 99888
Q ss_pred EEEEeec
Q 017514 286 LEVSEVN 292 (370)
Q Consensus 286 le~~~~~ 292 (370)
++....+
T Consensus 171 ~~~~~~~ 177 (239)
T 1xxl_A 171 IQKWNLP 177 (239)
T ss_dssp EEEEEEE
T ss_pred EEeecCc
Confidence 8776543
|
| >1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42 | Back alignment and structure |
|---|
Probab=98.73 E-value=2.7e-07 Score=84.28 Aligned_cols=146 Identities=15% Similarity=0.103 Sum_probs=94.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
...+|+|+|||+|..+..+. ++. ..+|+.-|.- +.......+...... +-
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~--------~~~--------~~~v~~vD~s-----------~~~~~~a~~~~~~~~---~~ 142 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLL--------TKL--------YATTDLLEPV-----------KHMLEEAKRELAGMP---VG 142 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTH--------HHH--------CSEEEEEESC-----------HHHHHHHHHHTTTSS---EE
T ss_pred CCCEEEEECCCcCHHHHHHH--------Hhh--------cCEEEEEeCC-----------HHHHHHHHHHhccCC---ce
Confidence 46799999999999887665 221 1356677764 333222222221100 22
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
.|.. +++..--+|++++|+++++.+||+++. .|+..+|+.-.+-|+
T Consensus 143 ~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~-------------------------------~~~~~~l~~~~~~Lk 188 (254)
T 1xtp_A 143 KFIL---ASMETATLPPNTYDLIVIQWTAIYLTD-------------------------------ADFVKFFKHCQQALT 188 (254)
T ss_dssp EEEE---SCGGGCCCCSSCEEEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHHEE
T ss_pred EEEE---ccHHHCCCCCCCeEEEEEcchhhhCCH-------------------------------HHHHHHHHHHHHhcC
Confidence 3333 366443457889999999999999632 244557888889999
Q ss_pred cCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEEE
Q 017514 210 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 289 (370)
Q Consensus 210 ~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~ 289 (370)
|||++++.......... ......+.+.++.++++..+++.| |++.+.+..
T Consensus 189 pgG~l~i~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~ 238 (254)
T 1xtp_A 189 PNGYIFFKENCSTGDRF-----------------------------LVDKEDSSLTRSDIHYKRLFNESG-VRVVKEAFQ 238 (254)
T ss_dssp EEEEEEEEEEBC--CCE-----------------------------EEETTTTEEEBCHHHHHHHHHHHT-CCEEEEEEC
T ss_pred CCeEEEEEecCCCcccc-----------------------------eecccCCcccCCHHHHHHHHHHCC-CEEEEeeec
Confidence 99999998763322100 001123445789999999999999 988777654
|
| >3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=98.73 E-value=1.1e-07 Score=88.18 Aligned_cols=150 Identities=14% Similarity=0.174 Sum_probs=95.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
...+|+|+|||+|..+..+. + +..+|+..|+. +... ....... +-
T Consensus 34 ~~~~vLDiGcG~G~~~~~l~--------~---------~~~~v~gvD~s-----------~~~~----~~a~~~~---~~ 78 (261)
T 3ege_A 34 KGSVIADIGAGTGGYSVALA--------N---------QGLFVYAVEPS-----------IVMR----QQAVVHP---QV 78 (261)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------T---------TTCEEEEECSC-----------HHHH----HSSCCCT---TE
T ss_pred CCCEEEEEcCcccHHHHHHH--------h---------CCCEEEEEeCC-----------HHHH----HHHHhcc---CC
Confidence 45799999999999887665 1 34788999985 3211 1111111 12
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
.|.. +++..--+|++++|++++..++||+.. +..+|+.-.+-|+
T Consensus 79 ~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~---------------------------------~~~~l~~~~~~Lk 122 (261)
T 3ege_A 79 EWFT---GYAENLALPDKSVDGVISILAIHHFSH---------------------------------LEKSFQEMQRIIR 122 (261)
T ss_dssp EEEC---CCTTSCCSCTTCBSEEEEESCGGGCSS---------------------------------HHHHHHHHHHHBC
T ss_pred EEEE---CchhhCCCCCCCEeEEEEcchHhhccC---------------------------------HHHHHHHHHHHhC
Confidence 3433 366443357899999999999999632 2236777788999
Q ss_pred cCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEEE
Q 017514 210 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 289 (370)
Q Consensus 210 ~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~ 289 (370)
||++++.....+..... .....+...... ...++++.+++. .+++.| |++.+.+.+
T Consensus 123 -gG~~~~~~~~~~~~~~~-----~~~~~~~~~~~~----------------~~~~~~~~~~~~-~l~~aG-F~~v~~~~~ 178 (261)
T 3ege_A 123 -DGTIVLLTFDIRLAQRI-----WLYDYFPFLWED----------------ALRFLPLDEQIN-LLQENT-KRRVEAIPF 178 (261)
T ss_dssp -SSCEEEEEECGGGCCCC-----GGGGTCHHHHHH----------------HHTSCCHHHHHH-HHHHHH-CSEEEEEEC
T ss_pred -CcEEEEEEcCCchhHHH-----HHHHHHHHHhhh----------------hhhhCCCHHHHH-HHHHcC-CCceeEEEe
Confidence 99888888765433210 000111111100 113467789999 999999 998888888
Q ss_pred eeccc
Q 017514 290 EVNWN 294 (370)
Q Consensus 290 ~~~w~ 294 (370)
..|+.
T Consensus 179 ~~p~~ 183 (261)
T 3ege_A 179 LLPHD 183 (261)
T ss_dssp CEETT
T ss_pred cCCCc
Confidence 77654
|
| >3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str} | Back alignment and structure |
|---|
Probab=98.73 E-value=5.8e-08 Score=89.10 Aligned_cols=169 Identities=15% Similarity=0.242 Sum_probs=96.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
...+|+|+|||+|..+..+. +. + + -+|+.-|+. +.......+..... +-
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~--------~~----~---~-~~v~~vD~s-----------~~~~~~a~~~~~~~----~~ 92 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAA--------EH----G---A-KKVLGIDLS-----------ERMLTEAKRKTTSP----VV 92 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHH--------HT----T---C-SEEEEEESC-----------HHHHHHHHHHCCCT----TE
T ss_pred CCCEEEEECCCCCHHHHHHH--------Hc----C---C-CEEEEEECC-----------HHHHHHHHHhhccC----Ce
Confidence 46899999999998877665 32 1 2 278888875 33333222222211 23
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
.|..+ ++..--+|++++|+++++.++||+.. ...+|+.-.+-|+
T Consensus 93 ~~~~~---d~~~~~~~~~~fD~v~~~~~l~~~~~---------------------------------~~~~l~~~~~~Lk 136 (253)
T 3g5l_A 93 CYEQK---AIEDIAIEPDAYNVVLSSLALHYIAS---------------------------------FDDICKKVYINLK 136 (253)
T ss_dssp EEEEC---CGGGCCCCTTCEEEEEEESCGGGCSC---------------------------------HHHHHHHHHHHEE
T ss_pred EEEEc---chhhCCCCCCCeEEEEEchhhhhhhh---------------------------------HHHHHHHHHHHcC
Confidence 45444 66443457899999999999999732 1236777788999
Q ss_pred cCceEEEEeeccCCCCCCCchhhhHHH----HHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEE
Q 017514 210 AEGRMVLTFLGRKSQDPSSKECCYIWE----LLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDH 285 (370)
Q Consensus 210 ~GG~lvl~~~g~~~~~~~~~~~~~~~~----~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~ 285 (370)
|||++++.............. ..++ .+...|.....++..... ...-....|.+|.+|+.+.+++.| |++.+
T Consensus 137 pgG~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~t~~~~~~~l~~aG-F~~~~ 212 (253)
T 3g5l_A 137 SSGSFIFSVEHPVFTADGRQD--WYTDETGNKLHWPVDRYFNESMRTSH-FLGEDVQKYHRTVTTYIQTLLKNG-FQINS 212 (253)
T ss_dssp EEEEEEEEEECHHHHSSSSCS--CEECSSCCEEEEEECCTTCCCEEEEE-ETTEEEEEECCCHHHHHHHHHHTT-EEEEE
T ss_pred CCcEEEEEeCCCccccCcccc--ceeccCCceEEEEeccccccceEEEe-eccccCccEecCHHHHHHHHHHcC-Ceeee
Confidence 999999986532110000000 0000 000000001111111100 001134567789999999999999 99877
Q ss_pred EEEE
Q 017514 286 LEVS 289 (370)
Q Consensus 286 le~~ 289 (370)
++-.
T Consensus 213 ~~e~ 216 (253)
T 3g5l_A 213 VIEP 216 (253)
T ss_dssp EECC
T ss_pred eecC
Confidence 6643
|
| >2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=8.5e-07 Score=84.38 Aligned_cols=161 Identities=14% Similarity=0.136 Sum_probs=93.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhh---CCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL---GSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~---~~~~~~ 126 (370)
...+|+|+|||+|..+..+. +.+ + .+|+.-|+. +.......+.. +...
T Consensus 90 ~~~~vLDiGcG~G~~~~~la--------~~~---~-----~~v~gvD~s-----------~~~~~~a~~~~~~~~~~~-- 140 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAV--------ERF---D-----VNVIGLTLS-----------KNQHARCEQVLASIDTNR-- 140 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHH--------HHH---C-----CEEEEEESC-----------HHHHHHHHHHHHTSCCSS--
T ss_pred CcCEEEEEcccchHHHHHHH--------HHC---C-----CEEEEEECC-----------HHHHHHHHHHHHhcCCCC--
Confidence 35799999999999877665 322 1 477777874 33222222111 2110
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
+-.|..+ ++ ..+ | +++|++++..++|++.. .|...+|+.-.+
T Consensus 141 -~v~~~~~---d~-~~~-~-~~fD~v~~~~~l~~~~~-------------------------------~~~~~~l~~~~~ 182 (318)
T 2fk8_A 141 -SRQVLLQ---GW-EDF-A-EPVDRIVSIEAFEHFGH-------------------------------ENYDDFFKRCFN 182 (318)
T ss_dssp -CEEEEES---CG-GGC-C-CCCSEEEEESCGGGTCG-------------------------------GGHHHHHHHHHH
T ss_pred -ceEEEEC---Ch-HHC-C-CCcCEEEEeChHHhcCH-------------------------------HHHHHHHHHHHH
Confidence 1234333 55 333 4 89999999999999632 133447777788
Q ss_pred hhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcC-cccCCHHHHHHHHHhcCceEEEE
Q 017514 207 ELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIP-QYTPSPAEIKSEVIKEGSFTIDH 285 (370)
Q Consensus 207 EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P-~y~~s~eE~~~~ie~~GsF~i~~ 285 (370)
-|+|||++++..+...+.... .....-...-...+.+...+ ...| .+.++.+++...+++.| |++.+
T Consensus 183 ~LkpgG~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~s~~~~~~~l~~aG-f~~~~ 250 (318)
T 2fk8_A 183 IMPADGRMTVQSSVSYHPYEM-AARGKKLSFETARFIKFIVT----------EIFPGGRLPSTEMMVEHGEKAG-FTVPE 250 (318)
T ss_dssp HSCTTCEEEEEEEECCCHHHH-HTTCHHHHHHHHHHHHHHHH----------HTSTTCCCCCHHHHHHHHHHTT-CBCCC
T ss_pred hcCCCcEEEEEEeccCCchhh-hhccccccccccchhhHHHH----------hcCCCCcCCCHHHHHHHHHhCC-CEEEE
Confidence 999999999998876542100 00000000001111111111 1123 35679999999999999 88776
Q ss_pred EEEE
Q 017514 286 LEVS 289 (370)
Q Consensus 286 le~~ 289 (370)
.+.+
T Consensus 251 ~~~~ 254 (318)
T 2fk8_A 251 PLSL 254 (318)
T ss_dssp CEEC
T ss_pred EEec
Confidence 6544
|
| >2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A | Back alignment and structure |
|---|
Probab=98.71 E-value=6.4e-08 Score=87.51 Aligned_cols=152 Identities=13% Similarity=0.124 Sum_probs=92.6
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCce
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (370)
..+|+|+|||+|..+..+. +. + .+|+.-|+. +.......+.... +-.
T Consensus 43 ~~~vLDiGcG~G~~~~~l~--------~~----~-----~~v~gvD~s-----------~~~~~~a~~~~~~-----~v~ 89 (250)
T 2p7i_A 43 PGNLLELGSFKGDFTSRLQ--------EH----F-----NDITCVEAS-----------EEAISHAQGRLKD-----GIT 89 (250)
T ss_dssp SSCEEEESCTTSHHHHHHT--------TT----C-----SCEEEEESC-----------HHHHHHHHHHSCS-----CEE
T ss_pred CCcEEEECCCCCHHHHHHH--------Hh----C-----CcEEEEeCC-----------HHHHHHHHHhhhC-----CeE
Confidence 3589999999999877554 21 1 257777765 3332222222211 123
Q ss_pred EEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHH-Hhhc
Q 017514 131 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRS-EELV 209 (370)
Q Consensus 131 f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra-~EL~ 209 (370)
|..+ ++ ..++|++++|+++++.+||++.. | ..+|+.-+ +-|+
T Consensus 90 ~~~~---d~-~~~~~~~~fD~v~~~~~l~~~~~-~--------------------------------~~~l~~~~~~~Lk 132 (250)
T 2p7i_A 90 YIHS---RF-EDAQLPRRYDNIVLTHVLEHIDD-P--------------------------------VALLKRINDDWLA 132 (250)
T ss_dssp EEES---CG-GGCCCSSCEEEEEEESCGGGCSS-H--------------------------------HHHHHHHHHTTEE
T ss_pred EEEc---cH-HHcCcCCcccEEEEhhHHHhhcC-H--------------------------------HHHHHHHHHHhcC
Confidence 4333 55 44578999999999999999643 1 12666667 8999
Q ss_pred cCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhh----hccCCcCcccCCHHHHHHHHHhcCceEEEE
Q 017514 210 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEK----VNCFNIPQYTPSPAEIKSEVIKEGSFTIDH 285 (370)
Q Consensus 210 ~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~----~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~ 285 (370)
|||++++..+.... ...... .+ .|...... .+...--....+.++++..+++.| |++.+
T Consensus 133 pgG~l~i~~~~~~~----------~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~ 195 (250)
T 2p7i_A 133 EGGRLFLVCPNANA----------VSRQIA-VK-----MGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAG-LQVTY 195 (250)
T ss_dssp EEEEEEEEEECTTC----------HHHHHH-HH-----TTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTT-CEEEE
T ss_pred CCCEEEEEcCChHH----------HHHHHH-HH-----cCccccchhcccccccccccccCCHHHHHHHHHHCC-CeEEE
Confidence 99999998865432 111111 11 13222110 000111124579999999999999 99988
Q ss_pred EEEE
Q 017514 286 LEVS 289 (370)
Q Consensus 286 le~~ 289 (370)
.+.+
T Consensus 196 ~~~~ 199 (250)
T 2p7i_A 196 RSGI 199 (250)
T ss_dssp EEEE
T ss_pred Eeee
Confidence 8755
|
| >3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=1.1e-06 Score=84.41 Aligned_cols=153 Identities=14% Similarity=0.079 Sum_probs=93.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (370)
++..+|+|+|||+|..+..++ +++ |..+++.-|+| ...... ..... +.+... +
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~--------~~~-------p~~~~~~~D~~-----~~~~~a---~~~~~-~~~~~~---~ 220 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALL--------TAH-------EDLSGTVLDLQ-----GPASAA---HRRFL-DTGLSG---R 220 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHH--------HHC-------TTCEEEEEECH-----HHHHHH---HHHHH-HTTCTT---T
T ss_pred CCCCEEEEeCCChhHHHHHHH--------HHC-------CCCeEEEecCH-----HHHHHH---HHhhh-hcCcCc---C
Confidence 356899999999998877655 332 45677777885 111111 11111 112110 2
Q ss_pred ceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
-.| +.++|+. -+|. +.|++++.+.||..++ .+...+|+.-++-|
T Consensus 221 v~~---~~~d~~~-~~p~-~~D~v~~~~vlh~~~~-------------------------------~~~~~~l~~~~~~L 264 (332)
T 3i53_A 221 AQV---VVGSFFD-PLPA-GAGGYVLSAVLHDWDD-------------------------------LSAVAILRRCAEAA 264 (332)
T ss_dssp EEE---EECCTTS-CCCC-SCSEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHHH
T ss_pred eEE---ecCCCCC-CCCC-CCcEEEEehhhccCCH-------------------------------HHHHHHHHHHHHhc
Confidence 244 4458874 3455 8999999999996332 22345788888999
Q ss_pred ccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEE
Q 017514 209 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEV 288 (370)
Q Consensus 209 ~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~ 288 (370)
+|||++++.-...++..+ ...+++.. |+.. ....+|.+|+++.+++.| |++.++..
T Consensus 265 ~pgG~l~i~e~~~~~~~~-----~~~~d~~~-----~~~~-------------~~~~~t~~e~~~ll~~aG-f~~~~~~~ 320 (332)
T 3i53_A 265 GSGGVVLVIEAVAGDEHA-----GTGMDLRM-----LTYF-------------GGKERSLAELGELAAQAG-LAVRAAHP 320 (332)
T ss_dssp TTTCEEEEEECCCC---C-----CHHHHHHH-----HHHH-------------SCCCCCHHHHHHHHHHTT-EEEEEEEE
T ss_pred CCCCEEEEEeecCCCCCc-----cHHHHHHH-----HhhC-------------CCCCCCHHHHHHHHHHCC-CEEEEEEE
Confidence 999999998665443311 11222211 1111 124579999999999999 98876653
|
| >2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca} | Back alignment and structure |
|---|
Probab=98.68 E-value=4.9e-07 Score=85.30 Aligned_cols=172 Identities=16% Similarity=0.153 Sum_probs=101.5
Q ss_pred HHHHHHHHhhcccCCCCceEEEeecCCC---CcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhH
Q 017514 34 PITEEAMTKLFCSTSPTKVAIADLGCSS---GPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLA 110 (370)
Q Consensus 34 ~~l~~ai~~~~~~~~~~~~~IaD~Gcs~---G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~ 110 (370)
.++..+++.+.. ..+.-+|+|+|||+ |..+. .+ .+.+ |..+|+.-|+. |
T Consensus 63 ~~~~~~~~~l~~--~~~~~~vLDlGcG~pt~G~~~~-~~-------~~~~-------p~~~v~~vD~s-----------p 114 (274)
T 2qe6_A 63 KVLVRGVRFLAG--EAGISQFLDLGSGLPTVQNTHE-VA-------QSVN-------PDARVVYVDID-----------P 114 (274)
T ss_dssp HHHHHHHHHHHT--TTCCCEEEEETCCSCCSSCHHH-HH-------HHHC-------TTCEEEEEESS-----------H
T ss_pred HHHHHHHHHHhh--ccCCCEEEEECCCCCCCChHHH-HH-------HHhC-------CCCEEEEEECC-----------h
Confidence 344444443331 12346999999999 94432 22 1221 45789999984 3
Q ss_pred HHHHHHHHhhCCCCCCCCceEEeecCCCccc-----------ccCCCCceeEEEeccccccccCCCCCccCCCceeeecC
Q 017514 111 SFQKILRKQLGSASGAAGQCFFTGVPGSFYG-----------RLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMAS 179 (370)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~-----------~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~ 179 (370)
.....-++...... +-.|+.+ ++.. ..+|.++.|+++++.+|||+..-
T Consensus 115 ~~l~~Ar~~~~~~~---~v~~~~~---D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~--------------- 173 (274)
T 2qe6_A 115 MVLTHGRALLAKDP---NTAVFTA---DVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPD--------------- 173 (274)
T ss_dssp HHHHHHHHHHTTCT---TEEEEEC---CTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTT---------------
T ss_pred HHHHHHHHhcCCCC---CeEEEEe---eCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcH---------------
Confidence 33222222222110 2345444 7743 23565689999999999997541
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccC
Q 017514 180 TSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCF 259 (370)
Q Consensus 180 ~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f 259 (370)
+...+|+.-++-|+|||+|++..+..+. + + .+..+...+.. .|
T Consensus 174 ----------------~~~~~l~~~~~~L~pGG~l~i~~~~~~~--~---~---~~~~~~~~~~~---~~---------- 216 (274)
T 2qe6_A 174 ----------------VVDRVVGAYRDALAPGSYLFMTSLVDTG--L---P---AQQKLARITRE---NL---------- 216 (274)
T ss_dssp ----------------THHHHHHHHHHHSCTTCEEEEEEEBCSS--C---H---HHHHHHHHHHH---HH----------
T ss_pred ----------------HHHHHHHHHHHhCCCCcEEEEEEecCcc--h---H---HHHHHHHHHHh---cC----------
Confidence 1223677778889999999999987642 1 1 11222222221 11
Q ss_pred CcCcccCCHHHHHHHHHhcCceEEEEEEEEeec-ccc
Q 017514 260 NIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVN-WNA 295 (370)
Q Consensus 260 ~~P~y~~s~eE~~~~ie~~GsF~i~~le~~~~~-w~~ 295 (370)
.|.++++.+|+++.+ .| |++....+...+ |.+
T Consensus 217 -~~~~~~s~~ei~~~l--~G-~~l~~~g~~~~~~w~p 249 (274)
T 2qe6_A 217 -GEGWARTPEEIERQF--GD-FELVEPGVVYTALWRP 249 (274)
T ss_dssp -SCCCCBCHHHHHHTT--TT-CEECTTCSEEGGGSSC
T ss_pred -CCCccCCHHHHHHHh--CC-CeEccCcEeccccccC
Confidence 367889999999999 47 887765544433 654
|
| >3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.68 E-value=4e-07 Score=81.39 Aligned_cols=142 Identities=15% Similarity=0.190 Sum_probs=93.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~ 126 (370)
...+|+|+|||+|..+..+. +.. .|..+|+.-|+- +.......+ ..+..
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~--------~~~------~~~~~v~~vD~s-----------~~~~~~a~~~~~~~~~~--- 88 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLS--------KMV------GEKGKVYAIDVQ-----------EEMVNYAWEKVNKLGLK--- 88 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHH--------HHH------TTTCEEEEEESC-----------HHHHHHHHHHHHHHTCT---
T ss_pred CCCEEEEEecCCCHHHHHHH--------HHh------CCCcEEEEEECC-----------HHHHHHHHHHHHHcCCC---
Confidence 45799999999999988766 332 145788888874 222111111 11211
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
+-.|..+ ++..--+|++++|+++++.++||+.+ | ..+|+.-.+
T Consensus 89 -~~~~~~~---d~~~~~~~~~~fD~v~~~~~l~~~~~-~--------------------------------~~~l~~~~~ 131 (219)
T 3dh0_A 89 -NVEVLKS---EENKIPLPDNTVDFIFMAFTFHELSE-P--------------------------------LKFLEELKR 131 (219)
T ss_dssp -TEEEEEC---BTTBCSSCSSCEEEEEEESCGGGCSS-H--------------------------------HHHHHHHHH
T ss_pred -cEEEEec---ccccCCCCCCCeeEEEeehhhhhcCC-H--------------------------------HHHHHHHHH
Confidence 2244444 55444478899999999999999633 1 226777788
Q ss_pred hhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEE
Q 017514 207 ELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHL 286 (370)
Q Consensus 207 EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~l 286 (370)
-|+|||++++.......... + .......+.+|++..+++.| |++.+.
T Consensus 132 ~LkpgG~l~i~~~~~~~~~~----------------------~----------~~~~~~~~~~~~~~~l~~~G-f~~~~~ 178 (219)
T 3dh0_A 132 VAKPFAYLAIIDWKKEERDK----------------------G----------PPPEEVYSEWEVGLILEDAG-IRVGRV 178 (219)
T ss_dssp HEEEEEEEEEEEECSSCCSS----------------------S----------CCGGGSCCHHHHHHHHHHTT-CEEEEE
T ss_pred HhCCCeEEEEEEeccccccc----------------------C----------CchhcccCHHHHHHHHHHCC-CEEEEE
Confidence 89999999998765543310 0 01123458999999999999 998777
Q ss_pred EEE
Q 017514 287 EVS 289 (370)
Q Consensus 287 e~~ 289 (370)
..+
T Consensus 179 ~~~ 181 (219)
T 3dh0_A 179 VEV 181 (219)
T ss_dssp EEE
T ss_pred Eee
Confidence 654
|
| >2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ... | Back alignment and structure |
|---|
Probab=98.68 E-value=6.6e-08 Score=90.97 Aligned_cols=90 Identities=16% Similarity=0.174 Sum_probs=65.0
Q ss_pred CCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeccCC
Q 017514 144 FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKS 223 (370)
Q Consensus 144 ~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~~ 223 (370)
+|++++|+++|+.+|||+..-. .|+..+|+.-++-|+|||+|++...-...
T Consensus 170 ~~~~~fD~V~~~~~l~~~~~~~-----------------------------~~~~~~l~~~~r~LkpGG~l~~~~~~~~~ 220 (289)
T 2g72_A 170 PAPLPADALVSAFCLEAVSPDL-----------------------------ASFQRALDHITTLLRPGGHLLLIGALEES 220 (289)
T ss_dssp SSCSSEEEEEEESCHHHHCSSH-----------------------------HHHHHHHHHHHTTEEEEEEEEEEEEESCC
T ss_pred cCCCCCCEEEehhhhhhhcCCH-----------------------------HHHHHHHHHHHHhcCCCCEEEEEEecCcc
Confidence 5678899999999999965411 34556788889999999999997422110
Q ss_pred CCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEEEeec
Q 017514 224 QDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVN 292 (370)
Q Consensus 224 ~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~~~~ 292 (370)
. +. .| .-..|.++.+.+|+++.+++.| |++..++.+..+
T Consensus 221 ~----------~~-----------~~--------~~~~~~~~~~~~~l~~~l~~aG-f~~~~~~~~~~~ 259 (289)
T 2g72_A 221 W----------YL-----------AG--------EARLTVVPVSEEEVREALVRSG-YKVRDLRTYIMP 259 (289)
T ss_dssp E----------EE-----------ET--------TEEEECCCCCHHHHHHHHHHTT-EEEEEEEEEECC
T ss_pred e----------EE-----------cC--------CeeeeeccCCHHHHHHHHHHcC-CeEEEeeEeecc
Confidence 0 00 01 1123567789999999999999 999988877644
|
| >3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.67 E-value=2.9e-07 Score=86.93 Aligned_cols=150 Identities=15% Similarity=0.174 Sum_probs=90.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHh---h-CCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQ---L-GSASG 125 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~---~-~~~~~ 125 (370)
...+|+|+|||+|..+..+. +.+ .+..+|+..|+- +.......+. . +...
T Consensus 36 ~~~~vLDiGcG~G~~~~~la--------~~~------~~~~~v~gvD~s-----------~~~~~~a~~~~~~~~~~~~- 89 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMA--------QEL------KPFEQIIGSDLS-----------ATMIKTAEVIKEGSPDTYK- 89 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHH--------HHS------SCCSEEEEEESC-----------HHHHHHHHHHHHHCC-CCT-
T ss_pred CCCEEEEECCCCCHHHHHHH--------HhC------CCCCEEEEEeCC-----------HHHHHHHHHHHHhccCCCC-
Confidence 46899999999999988766 321 134788888875 3322222111 1 1110
Q ss_pred CCCceEEeecCCCcccccCCC------CceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHH
Q 017514 126 AAGQCFFTGVPGSFYGRLFPR------NSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSL 199 (370)
Q Consensus 126 ~~~~~f~~~vpgSFy~~l~p~------~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~ 199 (370)
+-.|..+ ++.+--++. +++|+++++.++||+ . |. .
T Consensus 90 --~v~~~~~---d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~-~-~~--------------------------------~ 130 (299)
T 3g5t_A 90 --NVSFKIS---SSDDFKFLGADSVDKQKIDMITAVECAHWF-D-FE--------------------------------K 130 (299)
T ss_dssp --TEEEEEC---CTTCCGGGCTTTTTSSCEEEEEEESCGGGS-C-HH--------------------------------H
T ss_pred --ceEEEEc---CHHhCCccccccccCCCeeEEeHhhHHHHh-C-HH--------------------------------H
Confidence 2345444 553333455 899999999999998 3 21 2
Q ss_pred HHHHHHHhhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCccc-CCHHHHHHHHHhc
Q 017514 200 FLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYT-PSPAEIKSEVIKE 278 (370)
Q Consensus 200 fL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~-~s~eE~~~~ie~~ 278 (370)
+|+.-.+-|+|||.|++...+.+..... . .+...+.++... +...-|.+. |..+.++..+++.
T Consensus 131 ~l~~~~~~LkpgG~l~i~~~~~~~~~~~-~-------~~~~~~~~~~~~--------~~~~~~~w~~p~~~~~~~~l~~~ 194 (299)
T 3g5t_A 131 FQRSAYANLRKDGTIAIWGYADPIFPDY-P-------EFDDLMIEVPYG--------KQGLGPYWEQPGRSRLRNMLKDS 194 (299)
T ss_dssp HHHHHHHHEEEEEEEEEEEEEEEECTTC-G-------GGTTHHHHHHHC--------TTTTGGGSCTTHHHHHHTTTTTC
T ss_pred HHHHHHHhcCCCcEEEEEecCCccccCc-H-------HHHHHHHHhccC--------cccccchhhchhhHHHHHhhhcc
Confidence 6777788999999999976654322111 0 112222222211 012345444 8888999999988
Q ss_pred Cce
Q 017514 279 GSF 281 (370)
Q Consensus 279 GsF 281 (370)
| |
T Consensus 195 g-f 196 (299)
T 3g5t_A 195 H-L 196 (299)
T ss_dssp C-C
T ss_pred C-C
Confidence 8 5
|
| >2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15 | Back alignment and structure |
|---|
Probab=98.67 E-value=1.5e-07 Score=87.65 Aligned_cols=86 Identities=17% Similarity=0.169 Sum_probs=62.8
Q ss_pred CCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeccCCCC
Q 017514 146 RNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQD 225 (370)
Q Consensus 146 ~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~~~~ 225 (370)
.+++|+|+|+++|||+..-+ .|+...|+.-++-|||||+|++......+.
T Consensus 154 ~~~fD~V~~~~~l~~i~~~~-----------------------------~~~~~~l~~i~r~LKPGG~li~~~~~~~~~- 203 (263)
T 2a14_A 154 LPLADCVLTLLAMECACCSL-----------------------------DAYRAALCNLASLLKPGGHLVTTVTLRLPS- 203 (263)
T ss_dssp CCCEEEEEEESCHHHHCSSH-----------------------------HHHHHHHHHHHTTEEEEEEEEEEEESSCCE-
T ss_pred cCCCCEeeehHHHHHhcCCH-----------------------------HHHHHHHHHHHHHcCCCcEEEEEEeecCcc-
Confidence 56999999999999965421 355667888889999999999986532211
Q ss_pred CCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEEEe
Q 017514 226 PSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSE 290 (370)
Q Consensus 226 ~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~~ 290 (370)
.. .| .-..+.+..+.+|+...+++.| |++.+++...
T Consensus 204 -------~~-------------~g--------~~~~~~~~~~~~~l~~~l~~aG-F~i~~~~~~~ 239 (263)
T 2a14_A 204 -------YM-------------VG--------KREFSCVALEKGEVEQAVLDAG-FDIEQLLHSP 239 (263)
T ss_dssp -------EE-------------ET--------TEEEECCCCCHHHHHHHHHHTT-EEEEEEEEEC
T ss_pred -------ce-------------eC--------CeEeeccccCHHHHHHHHHHCC-CEEEEEeecc
Confidence 00 11 0123455679999999999999 9998888764
|
| >1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=8.1e-07 Score=82.88 Aligned_cols=166 Identities=14% Similarity=0.163 Sum_probs=96.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhC-CCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLG-SASGAAG 128 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~-~~~~~~~ 128 (370)
...+|+|+|||+|..+..+. +. +..+|+..|+. +.......+... ... ..+
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~--------~~--------~~~~v~gvD~s-----------~~~~~~a~~~~~~~~~-~~~ 115 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYE--------RA--------GIGEYYGVDIA-----------EVSINDARVRARNMKR-RFK 115 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHH--------HH--------TCSEEEEEESC-----------HHHHHHHHHHHHTSCC-SSE
T ss_pred CCCeEEEECCCCCHHHHHHH--------HC--------CCCEEEEEECC-----------HHHHHHHHHHHHhcCC-Ccc
Confidence 45799999999999887644 22 22478888875 322222211111 100 001
Q ss_pred ceEEeecCCCcccccC-CCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017514 129 QCFFTGVPGSFYGRLF-PRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~-p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~E 207 (370)
-.|..+ ++..--+ +++++|++++..++||+-.-+ .|...+|+.-++-
T Consensus 116 v~~~~~---d~~~~~~~~~~~fD~v~~~~~l~~~~~~~-----------------------------~~~~~~l~~~~~~ 163 (298)
T 1ri5_A 116 VFFRAQ---DSYGRHMDLGKEFDVISSQFSFHYAFSTS-----------------------------ESLDIAQRNIARH 163 (298)
T ss_dssp EEEEES---CTTTSCCCCSSCEEEEEEESCGGGGGSSH-----------------------------HHHHHHHHHHHHT
T ss_pred EEEEEC---CccccccCCCCCcCEEEECchhhhhcCCH-----------------------------HHHHHHHHHHHHh
Confidence 234333 5544334 688999999999999952101 3455688888899
Q ss_pred hccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHH-HhcC----------Ccch---hhh-----ccC-CcCcccCC
Q 017514 208 LVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNM-VSEG----------LIEE---EKV-----NCF-NIPQYTPS 267 (370)
Q Consensus 208 L~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~m-v~eG----------~i~~---e~~-----d~f-~~P~y~~s 267 (370)
|+|||++++..+.... ++..+. .. .... .++. .+. +.. ..|.++.+
T Consensus 164 LkpgG~l~~~~~~~~~----------~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~ 229 (298)
T 1ri5_A 164 LRPGGYFIMTVPSRDV----------ILERYK----QGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVNNCIEYFVD 229 (298)
T ss_dssp EEEEEEEEEEEECHHH----------HHHHHH----HTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCSSEEEECCC
T ss_pred cCCCCEEEEEECCHHH----------HHHHHc----cCccCCeeEEEEeCccccccccccceEEEEEchhhcCCcccccC
Confidence 9999999998864321 111111 10 0000 0000 000 000 23456789
Q ss_pred HHHHHHHHHhcCceEEEEEEEEe
Q 017514 268 PAEIKSEVIKEGSFTIDHLEVSE 290 (370)
Q Consensus 268 ~eE~~~~ie~~GsF~i~~le~~~ 290 (370)
++|++..+++.| |++.+.+.+.
T Consensus 230 ~~~l~~ll~~aG-f~~v~~~~~~ 251 (298)
T 1ri5_A 230 FTRMVDGFKRLG-LSLVERKGFI 251 (298)
T ss_dssp HHHHHHHHHTTT-EEEEEEEEHH
T ss_pred HHHHHHHHHHcC-CEEEEecCHH
Confidence 999999999999 9988776553
|
| >3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=2.4e-06 Score=83.68 Aligned_cols=155 Identities=16% Similarity=0.216 Sum_probs=96.0
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (370)
++..+|+|+|||+|..+..+. +++ |..+++.-|+| ...... ..... ..+.. .+
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~--------~~~-------p~~~~~~~D~~-----~~~~~a---~~~~~-~~~l~---~~ 253 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVL--------DAF-------PGLRGTLLERP-----PVAEEA---RELLT-GRGLA---DR 253 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHH--------HHC-------TTCEEEEEECH-----HHHHHH---HHHHH-HTTCT---TT
T ss_pred ccCcEEEEeCCCccHHHHHHH--------HHC-------CCCeEEEEcCH-----HHHHHH---HHhhh-hcCcC---Cc
Confidence 456899999999998877665 432 55788888985 111111 11111 11211 02
Q ss_pred ceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
-.| +.++|+ .-+|. +.|++++.+.||+.++ .+...+|+.-++-|
T Consensus 254 v~~---~~~d~~-~~~p~-~~D~v~~~~vlh~~~d-------------------------------~~~~~~L~~~~~~L 297 (369)
T 3gwz_A 254 CEI---LPGDFF-ETIPD-GADVYLIKHVLHDWDD-------------------------------DDVVRILRRIATAM 297 (369)
T ss_dssp EEE---EECCTT-TCCCS-SCSEEEEESCGGGSCH-------------------------------HHHHHHHHHHHTTC
T ss_pred eEE---eccCCC-CCCCC-CceEEEhhhhhccCCH-------------------------------HHHHHHHHHHHHHc
Confidence 244 445887 44565 8999999999997433 12234788888999
Q ss_pred ccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEE
Q 017514 209 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEV 288 (370)
Q Consensus 209 ~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~ 288 (370)
+|||++++.-...++... .....+++ .-|+..| -..+|.+|+++++++.| |++.++..
T Consensus 298 ~pgG~l~i~e~~~~~~~~---~~~~~~d~-----~~~~~~~-------------g~~~t~~e~~~ll~~aG-f~~~~~~~ 355 (369)
T 3gwz_A 298 KPDSRLLVIDNLIDERPA---ASTLFVDL-----LLLVLVG-------------GAERSESEFAALLEKSG-LRVERSLP 355 (369)
T ss_dssp CTTCEEEEEEEBCCSSCC---HHHHHHHH-----HHHHHHS-------------CCCBCHHHHHHHHHTTT-EEEEEEEE
T ss_pred CCCCEEEEEEeccCCCCC---CchhHhhH-----HHHhhcC-------------CccCCHHHHHHHHHHCC-CeEEEEEE
Confidence 999999998776554321 10111111 1121111 23578999999999999 98877753
|
| >2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42 | Back alignment and structure |
|---|
Probab=98.65 E-value=2.5e-07 Score=84.40 Aligned_cols=147 Identities=14% Similarity=0.110 Sum_probs=93.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
...+|+|+|||+|..+..+. +. + ..+|+..|+- +.......+..... +...-
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~--------~~----~----~~~v~~vD~s-----------~~~~~~a~~~~~~~-~~~~~ 130 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLL--------LP----L----FREVDMVDIT-----------EDFLVQAKTYLGEE-GKRVR 130 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTT--------TT----T----CSEEEEEESC-----------HHHHHHHHHHTGGG-GGGEE
T ss_pred CCCEEEEECCCCCHHHHHHH--------Hh----c----CCEEEEEeCC-----------HHHHHHHHHHhhhc-CCceE
Confidence 46799999999999887655 21 1 2467777874 33222222221110 00011
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
.|.. +++..-.++++++|++++..++|++.. .++..+|+.-.+-|+
T Consensus 131 ~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~-------------------------------~~~~~~l~~~~~~Lk 176 (241)
T 2ex4_A 131 NYFC---CGLQDFTPEPDSYDVIWIQWVIGHLTD-------------------------------QHLAEFLRRCKGSLR 176 (241)
T ss_dssp EEEE---CCGGGCCCCSSCEEEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHHEE
T ss_pred EEEE---cChhhcCCCCCCEEEEEEcchhhhCCH-------------------------------HHHHHHHHHHHHhcC
Confidence 2333 355444456779999999999998543 123447777788999
Q ss_pred cCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEEE
Q 017514 210 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 289 (370)
Q Consensus 210 ~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~ 289 (370)
|||++++........ ..+ +. .-+.+.++.++++..+++.| |++.+.+..
T Consensus 177 pgG~l~i~~~~~~~~--------~~~---------------------~~-~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~ 225 (241)
T 2ex4_A 177 PNGIIVIKDNMAQEG--------VIL---------------------DD-VDSSVCRDLDVVRRIICSAG-LSLLAEERQ 225 (241)
T ss_dssp EEEEEEEEEEEBSSS--------EEE---------------------ET-TTTEEEEBHHHHHHHHHHTT-CCEEEEEEC
T ss_pred CCeEEEEEEccCCCc--------cee---------------------cc-cCCcccCCHHHHHHHHHHcC-CeEEEeeec
Confidence 999999987655431 000 00 12335569999999999999 988777655
|
| >3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=1.8e-07 Score=89.11 Aligned_cols=166 Identities=16% Similarity=0.199 Sum_probs=96.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhC-----CCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLG-----SAS 124 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~-----~~~ 124 (370)
...+|+|+|||+|..+..+. +. +..+|+..|+-.. .+......+..... ...
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~--------~~--------~~~~v~gvD~s~~-------~l~~a~~~~~~~~~~~~~~~~~ 90 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWK--------KG--------RINKLVCTDIADV-------SVKQCQQRYEDMKNRRDSEYIF 90 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHH--------HT--------TCSEEEEEESCHH-------HHHHHHHHHHHHHSSSCC-CCC
T ss_pred CCCEEEEECCCCcHHHHHHH--------hc--------CCCEEEEEeCCHH-------HHHHHHHHHHHhhhcccccccc
Confidence 45799999999999887655 21 2367888887510 11111111111100 000
Q ss_pred CCCCceEEeecCCCccccc----C--CCCceeEEEeccccccc-cCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHH
Q 017514 125 GAAGQCFFTGVPGSFYGRL----F--PRNSVHLFHSSYSLQWL-SQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDF 197 (370)
Q Consensus 125 ~~~~~~f~~~vpgSFy~~l----~--p~~sv~~~~S~~alhWl-s~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~ 197 (370)
+-.|..+ +...-. + +++++|+++|+.++||+ ... .|.
T Consensus 91 ---~~~~~~~---D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~------------------------------~~~ 134 (313)
T 3bgv_A 91 ---SAEFITA---DSSKELLIDKFRDPQMCFDICSCQFVCHYSFESY------------------------------EQA 134 (313)
T ss_dssp ---EEEEEEC---CTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSH------------------------------HHH
T ss_pred ---eEEEEEe---cccccchhhhcccCCCCEEEEEEecchhhccCCH------------------------------HHH
Confidence 1234444 553321 4 35699999999999997 321 244
Q ss_pred HHHHHHHHHhhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhc--C-------Ccchhhh------------
Q 017514 198 SLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSE--G-------LIEEEKV------------ 256 (370)
Q Consensus 198 ~~fL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~e--G-------~i~~e~~------------ 256 (370)
..+|+.-++-|+|||++++++++.+ .+.+.|...-.+ | ..+.+++
T Consensus 135 ~~~l~~~~~~LkpgG~li~~~~~~~--------------~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~f~l~ 200 (313)
T 3bgv_A 135 DMMLRNACERLSPGGYFIGTTPNSF--------------ELIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDFNLE 200 (313)
T ss_dssp HHHHHHHHTTEEEEEEEEEEEECHH--------------HHHHHHTTSSSSEEECSSEEEEESCSSCCCSSCCEEEEEEC
T ss_pred HHHHHHHHHHhCCCcEEEEecCChH--------------HHHHHHHhhccCccCCeeEEEEeCCCCCCCCccceEEEEEC
Confidence 5578888899999999999988642 111222211000 0 0011111
Q ss_pred ccCCcCcccCCHHHHHHHHHhcCceEEEEEEEE
Q 017514 257 NCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 289 (370)
Q Consensus 257 d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~ 289 (370)
.....|.|..+.+++.+.+++.| |++...+.+
T Consensus 201 ~~~~~~~~~~~~~~~~~l~~~~G-~~~v~~~~f 232 (313)
T 3bgv_A 201 GVVDVPEFLVYFPLLNEMAKKYN-MKLVYKKTF 232 (313)
T ss_dssp ---CCEEECCCHHHHHHHGGGGT-EEEEEEEEH
T ss_pred CcccCcceEEcHHHHHHHHHHcC-cEEEEecCH
Confidence 23356778889999999999999 888776644
|
| >3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=1.6e-06 Score=84.94 Aligned_cols=154 Identities=15% Similarity=0.168 Sum_probs=95.2
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (370)
++..+|+|+|||+|..+..+. +++ |..+++.-|+| . .. ....... +
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~--------~~~-------p~~~~~~~D~~-----------~----~~-~~a~~~~---~ 247 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIV--------AKY-------PSINAINFDLP-----------H----VI-QDAPAFS---G 247 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHH--------HHC-------TTCEEEEEECH-----------H----HH-TTCCCCT---T
T ss_pred cCCCEEEEeCCCcCHHHHHHH--------HhC-------CCCEEEEEehH-----------H----HH-HhhhhcC---C
Confidence 456899999999999888766 442 56888889986 1 11 1111110 2
Q ss_pred ceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
-.| +.|+|++ -+|++ |++++.+.||+++. .+...+|+.-++-|
T Consensus 248 v~~---~~~d~~~-~~p~~--D~v~~~~vlh~~~~-------------------------------~~~~~~l~~~~~~L 290 (368)
T 3reo_A 248 VEH---LGGDMFD-GVPKG--DAIFIKWICHDWSD-------------------------------EHCLKLLKNCYAAL 290 (368)
T ss_dssp EEE---EECCTTT-CCCCC--SEEEEESCGGGBCH-------------------------------HHHHHHHHHHHHHS
T ss_pred CEE---EecCCCC-CCCCC--CEEEEechhhcCCH-------------------------------HHHHHHHHHHHHHc
Confidence 234 4569987 46765 99999999985322 23345788888999
Q ss_pred ccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEE
Q 017514 209 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEV 288 (370)
Q Consensus 209 ~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~ 288 (370)
+|||++++.=...++..... ... ......-+.-|+. ...-..+|.+|+++++++.| |++.++..
T Consensus 291 ~pgG~l~i~e~~~~~~~~~~-~~~--~~~~~~d~~~~~~------------~~~g~~rt~~e~~~ll~~AG-F~~v~~~~ 354 (368)
T 3reo_A 291 PDHGKVIVAEYILPPSPDPS-IAT--KVVIHTDALMLAY------------NPGGKERTEKEFQALAMASG-FRGFKVAS 354 (368)
T ss_dssp CTTCEEEEEECCCCSSCCCC-HHH--HHHHHHHHHHHHH------------SSBCCCCCHHHHHHHHHHTT-CCEEEEEE
T ss_pred CCCCEEEEEEeccCCCCCCc-hhh--hHHHhhhHHHHhh------------cCCCccCCHHHHHHHHHHCC-CeeeEEEE
Confidence 99999998766544332111 000 0001111111210 01124579999999999999 98877654
Q ss_pred E
Q 017514 289 S 289 (370)
Q Consensus 289 ~ 289 (370)
.
T Consensus 355 ~ 355 (368)
T 3reo_A 355 C 355 (368)
T ss_dssp E
T ss_pred e
Confidence 4
|
| >3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=98.64 E-value=2.2e-06 Score=82.77 Aligned_cols=156 Identities=13% Similarity=0.119 Sum_probs=95.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
+..+|+|+|||+|..+..+. +++ |..+++.-|+|. .-...+ .... ..+.. .+-
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~--------~~~-------p~~~~~~~D~~~--~~~~a~------~~~~-~~~~~---~~v 231 (352)
T 3mcz_A 179 RARTVIDLAGGHGTYLAQVL--------RRH-------PQLTGQIWDLPT--TRDAAR------KTIH-AHDLG---GRV 231 (352)
T ss_dssp TCCEEEEETCTTCHHHHHHH--------HHC-------TTCEEEEEECGG--GHHHHH------HHHH-HTTCG---GGE
T ss_pred CCCEEEEeCCCcCHHHHHHH--------HhC-------CCCeEEEEECHH--HHHHHH------HHHH-hcCCC---Cce
Confidence 36899999999999887666 432 457888889861 111111 1111 11211 012
Q ss_pred eEEeecCCCccccc-CCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 130 CFFTGVPGSFYGRL-FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 130 ~f~~~vpgSFy~~l-~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
.| +.++|+..- +++++.|++++...||+++. .+...+|+.-.+-|
T Consensus 232 ~~---~~~d~~~~~~~~~~~~D~v~~~~vlh~~~~-------------------------------~~~~~~l~~~~~~L 277 (352)
T 3mcz_A 232 EF---FEKNLLDARNFEGGAADVVMLNDCLHYFDA-------------------------------REAREVIGHAAGLV 277 (352)
T ss_dssp EE---EECCTTCGGGGTTCCEEEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHTE
T ss_pred EE---EeCCcccCcccCCCCccEEEEecccccCCH-------------------------------HHHHHHHHHHHHHc
Confidence 34 455886543 26677999999999997532 23445788888999
Q ss_pred ccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEE
Q 017514 209 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDH 285 (370)
Q Consensus 209 ~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~ 285 (370)
+|||++++.-...++.... ..+..+.+... |+.- .-...++.+|+++.+++.| |++.+
T Consensus 278 ~pgG~l~i~e~~~~~~~~~-----~~~~~~~~~~~-~~~~------------~~~~~~t~~e~~~ll~~aG-f~~~~ 335 (352)
T 3mcz_A 278 KPGGALLILTMTMNDDRVT-----PALSADFSLHM-MVNT------------NHGELHPTPWIAGVVRDAG-LAVGE 335 (352)
T ss_dssp EEEEEEEEEEECCCTTSSS-----SHHHHHHHHHH-HHHS------------TTCCCCCHHHHHHHHHHTT-CEEEE
T ss_pred CCCCEEEEEEeccCCCCCC-----CchHHHhhHHH-HhhC------------CCCCcCCHHHHHHHHHHCC-Cceee
Confidence 9999999987665543211 11222222111 1110 0122478999999999999 98877
|
| >2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=1.5e-06 Score=81.07 Aligned_cols=160 Identities=10% Similarity=0.072 Sum_probs=98.2
Q ss_pred HHHHHHHHHhhcccCCCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHH
Q 017514 33 KPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASF 112 (370)
Q Consensus 33 ~~~l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~ 112 (370)
.|.+.+.+..+.. .+...+|+|+|||+|.++..+. ++ | .+|+--|+- +..
T Consensus 53 ~~~l~~~~~~~~~--~~~~~~vLD~GCG~G~~~~~La--------~~----G-----~~V~gvD~S-----------~~~ 102 (252)
T 2gb4_A 53 HQLLKKHLDTFLK--GQSGLRVFFPLCGKAIEMKWFA--------DR----G-----HTVVGVEIS-----------EIG 102 (252)
T ss_dssp CHHHHHHHHHHHT--TCCSCEEEETTCTTCTHHHHHH--------HT----T-----CEEEEECSC-----------HHH
T ss_pred CHHHHHHHHHhcc--CCCCCeEEEeCCCCcHHHHHHH--------HC----C-----CeEEEEECC-----------HHH
Confidence 3455555443321 1235799999999999988766 32 2 578888876 443
Q ss_pred HHHHHHhhCC-----------CC-----CCCCceEEeecCCCcccccCCC-CceeEEEeccccccccCCCCCccCCCcee
Q 017514 113 QKILRKQLGS-----------AS-----GAAGQCFFTGVPGSFYGRLFPR-NSVHLFHSSYSLQWLSQVPDGLESNKGNI 175 (370)
Q Consensus 113 ~~~~~~~~~~-----------~~-----~~~~~~f~~~vpgSFy~~l~p~-~sv~~~~S~~alhWls~~P~~~~~nk~~i 175 (370)
.....++.+. ++ ...+-.|..| ++.+--++. +++|++++..+||+|. .
T Consensus 103 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---D~~~l~~~~~~~FD~V~~~~~l~~l~---~--------- 167 (252)
T 2gb4_A 103 IREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCC---SIFDLPRANIGKFDRIWDRGALVAIN---P--------- 167 (252)
T ss_dssp HHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEES---CTTTGGGGCCCCEEEEEESSSTTTSC---G---------
T ss_pred HHHHHHhcccccccccccccccccccccCCCceEEEEC---ccccCCcccCCCEEEEEEhhhhhhCC---H---------
Confidence 3333222210 00 0002234444 775433333 8999999999999973 2
Q ss_pred eecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhh
Q 017514 176 FMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEK 255 (370)
Q Consensus 176 ~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~ 255 (370)
.+...+++.-++-|+|||+|++..+..+..
T Consensus 168 -------------------~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~------------------------------- 197 (252)
T 2gb4_A 168 -------------------GDHDRYADIILSLLRKEFQYLVAVLSYDPT------------------------------- 197 (252)
T ss_dssp -------------------GGHHHHHHHHHHTEEEEEEEEEEEEECCTT-------------------------------
T ss_pred -------------------HHHHHHHHHHHHHcCCCeEEEEEEEecCCc-------------------------------
Confidence 122346777789999999997665432210
Q ss_pred hccCCcCcccCCHHHHHHHHHhcCceEEEEEEEEee
Q 017514 256 VNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEV 291 (370)
Q Consensus 256 ~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~~~ 291 (370)
...-|.+..+++|++..++. + |+|+.++....
T Consensus 198 --~~~g~~~~~~~~el~~~l~~-~-f~v~~~~~~~~ 229 (252)
T 2gb4_A 198 --KHAGPPFYVPSAELKRLFGT-K-CSMQCLEEVDA 229 (252)
T ss_dssp --SCCCSSCCCCHHHHHHHHTT-T-EEEEEEEEEEC
T ss_pred --cCCCCCCCCCHHHHHHHhhC-C-eEEEEEecccc
Confidence 01124455789999999986 5 99999886653
|
| >3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A* | Back alignment and structure |
|---|
Probab=98.61 E-value=1.8e-06 Score=84.50 Aligned_cols=153 Identities=17% Similarity=0.165 Sum_probs=95.7
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (370)
++..+|+|+|||+|..+..++ +++ |..+++.-|+| ..... ..... +
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~--------~~~-------p~~~~~~~D~~-----~~~~~-----------a~~~~---~ 245 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIA--------AHY-------PTIKGVNFDLP-----HVISE-----------APQFP---G 245 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHH--------HHC-------TTCEEEEEECH-----HHHTT-----------CCCCT---T
T ss_pred cCCCEEEEeCCCCCHHHHHHH--------HHC-------CCCeEEEecCH-----HHHHh-----------hhhcC---C
Confidence 356899999999999887766 442 56788889986 11111 11110 2
Q ss_pred ceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
-.| +.|+|++ -+|++ |++++.++||.+ |+ +|...+|+.-++-|
T Consensus 246 v~~---~~~D~~~-~~p~~--D~v~~~~vlh~~---~d----------------------------~~~~~~L~~~~~~L 288 (364)
T 3p9c_A 246 VTH---VGGDMFK-EVPSG--DTILMKWILHDW---SD----------------------------QHCATLLKNCYDAL 288 (364)
T ss_dssp EEE---EECCTTT-CCCCC--SEEEEESCGGGS---CH----------------------------HHHHHHHHHHHHHS
T ss_pred eEE---EeCCcCC-CCCCC--CEEEehHHhccC---CH----------------------------HHHHHHHHHHHHHc
Confidence 234 4569987 45765 999999999853 32 23445788888999
Q ss_pred ccCceEEEEeeccCCCCCCCchhhhHHH-HHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEE
Q 017514 209 VAEGRMVLTFLGRKSQDPSSKECCYIWE-LLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLE 287 (370)
Q Consensus 209 ~~GG~lvl~~~g~~~~~~~~~~~~~~~~-~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le 287 (370)
+|||++++.=...++..... . .+. ....-+.-|+. +..-..+|.+|+++++++.| |++.++.
T Consensus 289 ~pgG~l~i~e~~~~~~~~~~-~---~~~~~~~~d~~m~~~------------~~~g~~rt~~e~~~ll~~AG-F~~v~~~ 351 (364)
T 3p9c_A 289 PAHGKVVLVQCILPVNPEAN-P---SSQGVFHVDMIMLAH------------NPGGRERYEREFQALARGAG-FTGVKST 351 (364)
T ss_dssp CTTCEEEEEECCBCSSCCSS-H---HHHHHHHHHHHHHHH------------CSSCCCCBHHHHHHHHHHTT-CCEEEEE
T ss_pred CCCCEEEEEEeccCCCCCcc-h---hhhhHHHhHHHHHhc------------ccCCccCCHHHHHHHHHHCC-CceEEEE
Confidence 99999999766554332111 0 111 01111111210 11123478999999999999 9887766
Q ss_pred EE
Q 017514 288 VS 289 (370)
Q Consensus 288 ~~ 289 (370)
..
T Consensus 352 ~~ 353 (364)
T 3p9c_A 352 YI 353 (364)
T ss_dssp EE
T ss_pred Ec
Confidence 54
|
| >1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21 | Back alignment and structure |
|---|
Probab=98.61 E-value=1.5e-06 Score=79.57 Aligned_cols=148 Identities=14% Similarity=0.077 Sum_probs=90.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~ 126 (370)
...+|+|+|||+|..+..+. +.+ ..+|+.-|+- +...+...+ ..+...
T Consensus 36 ~~~~VLDiGcG~G~~~~~la--------~~~--------~~~v~gvD~s-----------~~~l~~a~~~~~~~~~~~-- 86 (256)
T 1nkv_A 36 PGTRILDLGSGSGEMLCTWA--------RDH--------GITGTGIDMS-----------SLFTAQAKRRAEELGVSE-- 86 (256)
T ss_dssp TTCEEEEETCTTCHHHHHHH--------HHT--------CCEEEEEESC-----------HHHHHHHHHHHHHTTCTT--
T ss_pred CCCEEEEECCCCCHHHHHHH--------Hhc--------CCeEEEEeCC-----------HHHHHHHHHHHHhcCCCc--
Confidence 45799999999999887665 321 1467777774 322222211 112110
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
+-.|.. +++.. +.+++++|+++|..++|++...+ .+|+.-.+
T Consensus 87 -~v~~~~---~d~~~-~~~~~~fD~V~~~~~~~~~~~~~---------------------------------~~l~~~~r 128 (256)
T 1nkv_A 87 -RVHFIH---NDAAG-YVANEKCDVAACVGATWIAGGFA---------------------------------GAEELLAQ 128 (256)
T ss_dssp -TEEEEE---SCCTT-CCCSSCEEEEEEESCGGGTSSSH---------------------------------HHHHHHTT
T ss_pred -ceEEEE---CChHh-CCcCCCCCEEEECCChHhcCCHH---------------------------------HHHHHHHH
Confidence 223443 47643 44488999999999999965311 15666688
Q ss_pred hhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEE
Q 017514 207 ELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHL 286 (370)
Q Consensus 207 EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~l 286 (370)
-|+|||++++..+....... . ..+...|. . .....+++.+++...+++.| |++..+
T Consensus 129 ~LkpgG~l~~~~~~~~~~~~-~-------~~~~~~~~--------------~-~~~~~~~~~~~~~~~l~~aG-f~~~~~ 184 (256)
T 1nkv_A 129 SLKPGGIMLIGEPYWRQLPA-T-------EEIAQACG--------------V-SSTSDFLTLPGLVGAFDDLG-YDVVEM 184 (256)
T ss_dssp SEEEEEEEEEEEEEETTCCS-S-------HHHHHTTT--------------C-SCGGGSCCHHHHHHHHHTTT-BCCCEE
T ss_pred HcCCCeEEEEecCcccCCCC-h-------HHHHHHHh--------------c-ccccccCCHHHHHHHHHHCC-CeeEEE
Confidence 99999999998765433211 1 01111110 0 11125689999999999999 887665
Q ss_pred EE
Q 017514 287 EV 288 (370)
Q Consensus 287 e~ 288 (370)
+.
T Consensus 185 ~~ 186 (256)
T 1nkv_A 185 VL 186 (256)
T ss_dssp EE
T ss_pred Ee
Confidence 43
|
| >3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=98.61 E-value=4.1e-07 Score=88.27 Aligned_cols=153 Identities=18% Similarity=0.174 Sum_probs=94.6
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (370)
++..+|+|+|||+|..+..+. +++ |..+++.-|+| .... .. .. ...+.. .+
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~--------~~~-------p~~~~~~~D~~-----~~~~--~~---~~-~~~~~~---~~ 233 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVL--------REH-------PGLQGVLLDRA-----EVVA--RH---RL-DAPDVA---GR 233 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHH--------HHC-------TTEEEEEEECH-----HHHT--TC---CC-CCGGGT---TS
T ss_pred cCCceEEEECCccCHHHHHHH--------HHC-------CCCEEEEecCH-----HHhh--cc---cc-cccCCC---CC
Confidence 456899999999999887766 432 56788888985 1111 00 00 000110 01
Q ss_pred ceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
-.| +.|+|+ .-+| +.|++++.++||++++ .+...+|+.-++-|
T Consensus 234 v~~---~~~d~~-~~~p--~~D~v~~~~vlh~~~d-------------------------------~~~~~~L~~~~~~L 276 (348)
T 3lst_A 234 WKV---VEGDFL-REVP--HADVHVLKRILHNWGD-------------------------------EDSVRILTNCRRVM 276 (348)
T ss_dssp EEE---EECCTT-TCCC--CCSEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHTC
T ss_pred eEE---EecCCC-CCCC--CCcEEEEehhccCCCH-------------------------------HHHHHHHHHHHHhc
Confidence 234 456887 4456 9999999999996332 22345788889999
Q ss_pred ccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEE
Q 017514 209 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEV 288 (370)
Q Consensus 209 ~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~ 288 (370)
+|||++++.-...++..... ....++. .-|+. ..-..+|.+|+++.+++.| |++.++..
T Consensus 277 kpgG~l~i~e~~~~~~~~~~--~~~~~d~-----~~~~~-------------~~~~~~t~~e~~~ll~~aG-f~~~~~~~ 335 (348)
T 3lst_A 277 PAHGRVLVIDAVVPEGNDAH--QSKEMDF-----MMLAA-------------RTGQERTAAELEPLFTAAG-LRLDRVVG 335 (348)
T ss_dssp CTTCEEEEEECCBCSSSSCC--HHHHHHH-----HHHHT-------------TSCCCCBHHHHHHHHHHTT-EEEEEEEE
T ss_pred CCCCEEEEEEeccCCCCCcc--hhhhcCh-----hhhhc-------------CCCcCCCHHHHHHHHHHCC-CceEEEEE
Confidence 99999999766554432111 0111111 11211 1124578999999999999 98877654
|
| >3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=98.61 E-value=9.2e-07 Score=78.91 Aligned_cols=154 Identities=12% Similarity=0.093 Sum_probs=94.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
...+|+|+|||+|..+..+. + . + .+++..|.. +.......+ . ..
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~--------~-------~-~-~~~~~~D~~-----------~~~~~~~~~----~----~~ 75 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIK--------E-------N-G-TRVSGIEAF-----------PEAAEQAKE----K----LD 75 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHH--------T-------T-T-CEEEEEESS-----------HHHHHHHHT----T----SS
T ss_pred CCCcEEEeCCCCCHHHHHHH--------h-------c-C-CeEEEEeCC-----------HHHHHHHHH----h----CC
Confidence 45799999999999887655 1 1 3 678888874 322222111 1 11
Q ss_pred eEEeecCCCccc--ccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017514 130 CFFTGVPGSFYG--RLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (370)
Q Consensus 130 ~f~~~vpgSFy~--~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~E 207 (370)
-+..+ ++.. .-+|++++|+++++.++|++.. | ..+|+.-.+-
T Consensus 76 ~~~~~---d~~~~~~~~~~~~fD~v~~~~~l~~~~~-~--------------------------------~~~l~~~~~~ 119 (230)
T 3cc8_A 76 HVVLG---DIETMDMPYEEEQFDCVIFGDVLEHLFD-P--------------------------------WAVIEKVKPY 119 (230)
T ss_dssp EEEES---CTTTCCCCSCTTCEEEEEEESCGGGSSC-H--------------------------------HHHHHHTGGG
T ss_pred cEEEc---chhhcCCCCCCCccCEEEECChhhhcCC-H--------------------------------HHHHHHHHHH
Confidence 23333 4433 3357789999999999999643 1 1267777889
Q ss_pred hccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhc-cCCcCcccCCHHHHHHHHHhcCceEEEEE
Q 017514 208 LVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVN-CFNIPQYTPSPAEIKSEVIKEGSFTIDHL 286 (370)
Q Consensus 208 L~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d-~f~~P~y~~s~eE~~~~ie~~GsF~i~~l 286 (370)
|+|||++++..+.... +..+... ..... ...... .-.....+.+.+|+...+++.| |++.++
T Consensus 120 L~~gG~l~~~~~~~~~-----------~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~ 182 (230)
T 3cc8_A 120 IKQNGVILASIPNVSH-----------ISVLAPL----LAGNW-TYTEYGLLDKTHIRFFTFNEMLRMFLKAG-YSISKV 182 (230)
T ss_dssp EEEEEEEEEEEECTTS-----------HHHHHHH----HTTCC-CCBSSSTTBTTCCCCCCHHHHHHHHHHTT-EEEEEE
T ss_pred cCCCCEEEEEeCCcch-----------HHHHHHH----hcCCc-eeccCCCCCcceEEEecHHHHHHHHHHcC-CeEEEE
Confidence 9999999998865432 1111111 11111 110000 0012335679999999999999 999888
Q ss_pred EEEeec
Q 017514 287 EVSEVN 292 (370)
Q Consensus 287 e~~~~~ 292 (370)
+.+..+
T Consensus 183 ~~~~~~ 188 (230)
T 3cc8_A 183 DRVYVD 188 (230)
T ss_dssp EEEECC
T ss_pred EecccC
Confidence 877543
|
| >3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440} | Back alignment and structure |
|---|
Probab=98.60 E-value=6e-07 Score=79.99 Aligned_cols=155 Identities=16% Similarity=0.140 Sum_probs=92.0
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCce
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (370)
..+|+|+|||+|..+..+. +. ..+|+.-|+. +.......+. + ...
T Consensus 53 ~~~vLdiG~G~G~~~~~l~--------~~---------~~~v~~vD~s-----------~~~~~~a~~~-~------~~~ 97 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALA--------DR---------GIEAVGVDGD-----------RTLVDAARAA-G------AGE 97 (227)
T ss_dssp CSEEEEETCTTCHHHHHHH--------TT---------TCEEEEEESC-----------HHHHHHHHHT-C------SSC
T ss_pred CCEEEEeCCCCCHHHHHHH--------HC---------CCEEEEEcCC-----------HHHHHHHHHh-c------ccc
Confidence 4899999999998887655 21 2578888875 3332222222 1 223
Q ss_pred EEeecCCCccccc-CCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 131 FFTGVPGSFYGRL-FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 131 f~~~vpgSFy~~l-~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
+..+-...+-... .+.+++|+++++.++|+ +. ...+|+.-.+-|+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~~----~~------------------------------~~~~l~~~~~~L~ 143 (227)
T 3e8s_A 98 VHLASYAQLAEAKVPVGKDYDLICANFALLH----QD------------------------------IIELLSAMRTLLV 143 (227)
T ss_dssp EEECCHHHHHTTCSCCCCCEEEEEEESCCCS----SC------------------------------CHHHHHHHHHTEE
T ss_pred cchhhHHhhcccccccCCCccEEEECchhhh----hh------------------------------HHHHHHHHHHHhC
Confidence 4433111111112 45556999999999992 21 1126777788999
Q ss_pred cCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEE
Q 017514 210 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEV 288 (370)
Q Consensus 210 ~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~ 288 (370)
|||++++..+........ . +...|....-.|.. -.....+.++++.+|++..+++.| |++.+++.
T Consensus 144 pgG~l~~~~~~~~~~~~~--~-------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~ 208 (227)
T 3e8s_A 144 PGGALVIQTLHPWSVADG--D-------YQDGWREESFAGFA----GDWQPMPWYFRTLASWLNALDMAG-LRLVSLQE 208 (227)
T ss_dssp EEEEEEEEECCTTTTCTT--C-------CSCEEEEECCTTSS----SCCCCEEEEECCHHHHHHHHHHTT-EEEEEEEC
T ss_pred CCeEEEEEecCccccCcc--c-------cccccchhhhhccc----cCcccceEEEecHHHHHHHHHHcC-CeEEEEec
Confidence 999999998866433110 0 00000000000100 001246778899999999999999 99988765
|
| >4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=2e-06 Score=83.81 Aligned_cols=154 Identities=15% Similarity=0.177 Sum_probs=94.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
..-+|+|+|||+|..++.++ +++ |.+.++.-|+| + ..+.-.+..... +. .+
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~--------~~~-------p~~~~~~~dlp-----------~-v~~~a~~~~~~~-~~-~r 229 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECM--------SLY-------PGCKITVFDIP-----------E-VVWTAKQHFSFQ-EE-EQ 229 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHH--------HHC-------SSCEEEEEECH-----------H-HHHHHHHHSCC---C-CS
T ss_pred cCCeEEeeCCCCCHHHHHHH--------HhC-------CCceeEeccCH-----------H-HHHHHHHhhhhc-cc-Cc
Confidence 45689999999998877666 543 67888889997 1 111111111110 00 22
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
+.-++|+|++.-+| .-|+++..+.||-. |+ ++-..+|+.-++-|+
T Consensus 230 --v~~~~gD~~~~~~~--~~D~~~~~~vlh~~---~d----------------------------~~~~~iL~~~~~al~ 274 (353)
T 4a6d_A 230 --IDFQEGDFFKDPLP--EADLYILARVLHDW---AD----------------------------GKCSHLLERIYHTCK 274 (353)
T ss_dssp --EEEEESCTTTSCCC--CCSEEEEESSGGGS---CH----------------------------HHHHHHHHHHHHHCC
T ss_pred --eeeecCccccCCCC--CceEEEeeeecccC---CH----------------------------HHHHHHHHHHHhhCC
Confidence 23356799986444 45999999999932 42 233447888899999
Q ss_pred cCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEE
Q 017514 210 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLE 287 (370)
Q Consensus 210 ~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le 287 (370)
|||++++.=.-.++...... ...++++ .=|+. ..--.||.+|+++++++.| |++.++.
T Consensus 275 pgg~lli~e~~~~~~~~~~~-~~~~~dl-----~ml~~-------------~~g~ert~~e~~~ll~~AG-f~~v~v~ 332 (353)
T 4a6d_A 275 PGGGILVIESLLDEDRRGPL-LTQLYSL-----NMLVQ-------------TEGQERTPTHYHMLLSSAG-FRDFQFK 332 (353)
T ss_dssp TTCEEEEEECCCCTTSCCCH-HHHHHHH-----HHHHS-------------SSCCCCCHHHHHHHHHHHT-CEEEEEE
T ss_pred CCCEEEEEEeeeCCCCCCCH-HHHHHHH-----HHHHh-------------CCCcCCCHHHHHHHHHHCC-CceEEEE
Confidence 99999987554443321111 1111221 11211 1123589999999999999 9876654
|
| >3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=2.5e-06 Score=81.17 Aligned_cols=150 Identities=12% Similarity=0.036 Sum_probs=95.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~ 126 (370)
...+|+|+|||+|..++.+. +++ ..+|+.-|+. +.......+ ..+...
T Consensus 117 ~~~~vLDiGcG~G~~~~~la--------~~~--------~~~v~gvD~s-----------~~~~~~a~~~~~~~~~~~-- 167 (312)
T 3vc1_A 117 PDDTLVDAGCGRGGSMVMAH--------RRF--------GSRVEGVTLS-----------AAQADFGNRRARELRIDD-- 167 (312)
T ss_dssp TTCEEEEESCTTSHHHHHHH--------HHH--------CCEEEEEESC-----------HHHHHHHHHHHHHTTCTT--
T ss_pred CCCEEEEecCCCCHHHHHHH--------HHc--------CCEEEEEeCC-----------HHHHHHHHHHHHHcCCCC--
Confidence 45799999999999988766 321 1567777774 222222111 112110
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
+-.|..+ ++..--+|++++|++++..++||+. +. .+|+.-.+
T Consensus 168 -~v~~~~~---d~~~~~~~~~~fD~V~~~~~l~~~~--~~--------------------------------~~l~~~~~ 209 (312)
T 3vc1_A 168 -HVRSRVC---NMLDTPFDKGAVTASWNNESTMYVD--LH--------------------------------DLFSEHSR 209 (312)
T ss_dssp -TEEEEEC---CTTSCCCCTTCEEEEEEESCGGGSC--HH--------------------------------HHHHHHHH
T ss_pred -ceEEEEC---ChhcCCCCCCCEeEEEECCchhhCC--HH--------------------------------HHHHHHHH
Confidence 2345444 6644336789999999999999973 21 16777788
Q ss_pred hhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEE
Q 017514 207 ELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHL 286 (370)
Q Consensus 207 EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~l 286 (370)
-|+|||++++......+..... ...+..+...+ .| ..++.+++.+.+++.| |++..+
T Consensus 210 ~LkpgG~l~~~~~~~~~~~~~~---~~~~~~~~~~~------------------~~-~~~s~~~~~~~l~~aG-f~~~~~ 266 (312)
T 3vc1_A 210 FLKVGGRYVTITGCWNPRYGQP---SKWVSQINAHF------------------EC-NIHSRREYLRAMADNR-LVPHTI 266 (312)
T ss_dssp HEEEEEEEEEEEEEECTTTCSC---CHHHHHHHHHH------------------TC-CCCBHHHHHHHHHTTT-EEEEEE
T ss_pred HcCCCcEEEEEEccccccccch---hHHHHHHHhhh------------------cC-CCCCHHHHHHHHHHCC-CEEEEE
Confidence 9999999999987766532111 11222221111 11 4788999999999999 998887
Q ss_pred EEE
Q 017514 287 EVS 289 (370)
Q Consensus 287 e~~ 289 (370)
+.+
T Consensus 267 ~~~ 269 (312)
T 3vc1_A 267 VDL 269 (312)
T ss_dssp EEC
T ss_pred EeC
Confidence 765
|
| >3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.54 E-value=2e-06 Score=84.06 Aligned_cols=159 Identities=14% Similarity=0.140 Sum_probs=95.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCC-C
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAA-G 128 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~-~ 128 (370)
+.-+|+|+|||+|..+..++ +++ |..+++.-|+| .......+..... +.. +
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~--------~~~-------p~~~~~~~D~~------------~~~~~a~~~~~~~-~~~~~ 230 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCV--------QYN-------KEVEVTIVDLP------------QQLEMMRKQTAGL-SGSER 230 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHH--------HHS-------TTCEEEEEECH------------HHHHHHHHHHTTC-TTGGG
T ss_pred CCCEEEEeCCCcCHHHHHHH--------HhC-------CCCEEEEEeCH------------HHHHHHHHHHHhc-Ccccc
Confidence 45799999999999888766 432 56889999986 1111111111110 000 1
Q ss_pred ceEEeecCCCccccc--CCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 129 QCFFTGVPGSFYGRL--FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l--~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
-.| +.|+|+..- +| ++.|++++.+.||.+ |+ .+...+|+.-++
T Consensus 231 v~~---~~~d~~~~~~~~p-~~~D~v~~~~vlh~~---~~----------------------------~~~~~~l~~~~~ 275 (363)
T 3dp7_A 231 IHG---HGANLLDRDVPFP-TGFDAVWMSQFLDCF---SE----------------------------EEVISILTRVAQ 275 (363)
T ss_dssp EEE---EECCCCSSSCCCC-CCCSEEEEESCSTTS---CH----------------------------HHHHHHHHHHHH
T ss_pred eEE---EEccccccCCCCC-CCcCEEEEechhhhC---CH----------------------------HHHHHHHHHHHH
Confidence 234 455887642 45 899999999999853 31 234457888889
Q ss_pred hhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEE
Q 017514 207 ELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHL 286 (370)
Q Consensus 207 EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~l 286 (370)
-|+|||++++.-...++... . ...+... ....+|.. ........+|.+|+++.+++.| |++.++
T Consensus 276 ~L~pgG~l~i~e~~~~~~~~---~-~~~~~~~-~~~~~~~~----------~~~~~~~~~t~~e~~~ll~~AG-f~~v~~ 339 (363)
T 3dp7_A 276 SIGKDSKVYIMETLWDRQRY---E-TASYCLT-QISLYFTA----------MANGNSKMFHSDDLIRCIENAG-LEVEEI 339 (363)
T ss_dssp HCCTTCEEEEEECCTTSCSS---H-HHHHHHH-HHHHHHHH----------SSCSSCCSCCHHHHHHHHHTTT-EEESCC
T ss_pred hcCCCcEEEEEeeccCCccc---c-chhhHHH-HhhhhHHh----------hhCCCCcccCHHHHHHHHHHcC-CeEEEE
Confidence 99999999987655443321 1 1111111 11111100 0112234569999999999999 987665
Q ss_pred E
Q 017514 287 E 287 (370)
Q Consensus 287 e 287 (370)
.
T Consensus 340 ~ 340 (363)
T 3dp7_A 340 Q 340 (363)
T ss_dssp C
T ss_pred E
Confidence 4
|
| >3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=2.1e-07 Score=87.99 Aligned_cols=172 Identities=15% Similarity=0.148 Sum_probs=97.3
Q ss_pred eEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCC---CC
Q 017514 52 VAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGA---AG 128 (370)
Q Consensus 52 ~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~---~~ 128 (370)
-+|+|+|||+|..+..+. +. ..+|+.-|+- +.......+..... +. .+
T Consensus 84 ~~vLDlGcG~G~~~~~l~--------~~---------~~~v~gvD~s-----------~~~~~~a~~~~~~~-~~~~~~~ 134 (299)
T 3g2m_A 84 GPVLELAAGMGRLTFPFL--------DL---------GWEVTALELS-----------TSVLAAFRKRLAEA-PADVRDR 134 (299)
T ss_dssp SCEEEETCTTTTTHHHHH--------TT---------TCCEEEEESC-----------HHHHHHHHHHHHTS-CHHHHTT
T ss_pred CcEEEEeccCCHHHHHHH--------Hc---------CCeEEEEECC-----------HHHHHHHHHHHhhc-ccccccc
Confidence 399999999999988776 21 2567888875 33222222211110 00 02
Q ss_pred ceEEeecCCCcccccCCCCceeEEE-eccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFH-SSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~-S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~E 207 (370)
-.|+.+ ++.. +.+++++|+++ ++.++||++. .|...+|+.-++-
T Consensus 135 v~~~~~---d~~~-~~~~~~fD~v~~~~~~~~~~~~-------------------------------~~~~~~l~~~~~~ 179 (299)
T 3g2m_A 135 CTLVQG---DMSA-FALDKRFGTVVISSGSINELDE-------------------------------ADRRGLYASVREH 179 (299)
T ss_dssp EEEEEC---BTTB-CCCSCCEEEEEECHHHHTTSCH-------------------------------HHHHHHHHHHHHH
T ss_pred eEEEeC---chhc-CCcCCCcCEEEECCcccccCCH-------------------------------HHHHHHHHHHHHH
Confidence 245444 6633 44588999887 5688998532 3455678888899
Q ss_pred hccCceEEEEeeccCCCCCCCchhhhHHHHH-HHHHHHHHhcCCcc---------------hhhhccCCcCcccCCHHHH
Q 017514 208 LVAEGRMVLTFLGRKSQDPSSKECCYIWELL-ATALNNMVSEGLIE---------------EEKVNCFNIPQYTPSPAEI 271 (370)
Q Consensus 208 L~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l-~~al~~mv~eG~i~---------------~e~~d~f~~P~y~~s~eE~ 271 (370)
|+|||+|++..................+... ...+ ........ ...+..+....++.+++|+
T Consensus 180 L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el 257 (299)
T 3g2m_A 180 LEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRY--VLHVRHLPAEEIQEITIHPADETTDPFVVCTHRRRLLAPDQV 257 (299)
T ss_dssp EEEEEEEEEEEECCHHHHSCCCCC---------------CCEEEEEEEEEEEEEEEESCC--CCCCEEEEEEEEECHHHH
T ss_pred cCCCcEEEEEeecCccccccchhccceeecCCCcEE--EEEEEEeccccEEEEEEEeccCCCCcEEEEEEEEEEeCHHHH
Confidence 9999999999987653211000000001000 0000 00000000 0111223455667899999
Q ss_pred HHHHHhcCceEEEEEEEEe
Q 017514 272 KSEVIKEGSFTIDHLEVSE 290 (370)
Q Consensus 272 ~~~ie~~GsF~i~~le~~~ 290 (370)
+..+++.| |++...+.+.
T Consensus 258 ~~ll~~aG-F~v~~~~~~~ 275 (299)
T 3g2m_A 258 VRELVRSG-FDVIAQTPFA 275 (299)
T ss_dssp HHHHHHTT-CEEEEEEEEC
T ss_pred HHHHHHCC-CEEEEEEecC
Confidence 99999999 9998888664
|
| >1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41 | Back alignment and structure |
|---|
Probab=98.54 E-value=2.9e-06 Score=76.24 Aligned_cols=97 Identities=15% Similarity=0.121 Sum_probs=64.3
Q ss_pred CcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEE
Q 017514 138 SFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLT 217 (370)
Q Consensus 138 SFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~ 217 (370)
++..--+|++++|++++..++||+.. | ..+|+.-.+-|+|||++++.
T Consensus 92 d~~~~~~~~~~fD~v~~~~~l~~~~~-~--------------------------------~~~l~~~~~~L~pgG~l~i~ 138 (219)
T 1vlm_A 92 TAENLPLKDESFDFALMVTTICFVDD-P--------------------------------ERALKEAYRILKKGGYLIVG 138 (219)
T ss_dssp BTTBCCSCTTCEEEEEEESCGGGSSC-H--------------------------------HHHHHHHHHHEEEEEEEEEE
T ss_pred ccccCCCCCCCeeEEEEcchHhhccC-H--------------------------------HHHHHHHHHHcCCCcEEEEE
Confidence 44332357789999999999999632 1 12566667889999999999
Q ss_pred eeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEEE
Q 017514 218 FLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 289 (370)
Q Consensus 218 ~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~ 289 (370)
.+.... .+.. .+... ..+ ..+.....+.+.+|++..+++.| |++.++...
T Consensus 139 ~~~~~~----------~~~~---~~~~~-~~~-------~~~~~~~~~~~~~~l~~~l~~~G-f~~~~~~~~ 188 (219)
T 1vlm_A 139 IVDRES----------FLGR---EYEKN-KEK-------SVFYKNARFFSTEELMDLMRKAG-FEEFKVVQT 188 (219)
T ss_dssp EECSSS----------HHHH---HHHHT-TTC--------CCSTTCCCCCHHHHHHHHHHTT-CEEEEEEEE
T ss_pred EeCCcc----------HHHH---HHHHH-hcC-------cchhcccccCCHHHHHHHHHHCC-CeEEEEecc
Confidence 875431 1111 11111 111 22334456789999999999999 988777654
|
| >2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.53 E-value=7e-06 Score=78.58 Aligned_cols=152 Identities=17% Similarity=0.242 Sum_probs=92.5
Q ss_pred eEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCceE
Q 017514 52 VAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCF 131 (370)
Q Consensus 52 ~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~f 131 (370)
.+|+|+|||+|..+..+. +++ |..+++.-|+|. .-...+. .... .+... +-.|
T Consensus 169 ~~vlDvG~G~G~~~~~l~--------~~~-------p~~~~~~~D~~~--~~~~a~~------~~~~-~~~~~---~v~~ 221 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAIL--------QAE-------PSARGVMLDREG--SLGVARD------NLSS-LLAGE---RVSL 221 (334)
T ss_dssp CEEEEETCTTCHHHHHHH--------HHC-------TTCEEEEEECTT--CTHHHHH------HTHH-HHHTT---SEEE
T ss_pred CEEEEeCCCchHHHHHHH--------HHC-------CCCEEEEeCcHH--HHHHHHH------HHhh-cCCCC---cEEE
Confidence 899999999998877665 332 457889999851 1111111 1110 01000 2234
Q ss_pred EeecCCCcccccCCCCceeEEEeccccc-cccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 017514 132 FTGVPGSFYGRLFPRNSVHLFHSSYSLQ-WLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 210 (370)
Q Consensus 132 ~~~vpgSFy~~l~p~~sv~~~~S~~alh-Wls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~ 210 (370)
+.++|.+. +| ++.|++++...+| | |+ .+...+|+.-++-|+|
T Consensus 222 ---~~~d~~~~-~~-~~~D~v~~~~vl~~~----~~----------------------------~~~~~~l~~~~~~L~p 264 (334)
T 2ip2_A 222 ---VGGDMLQE-VP-SNGDIYLLSRIIGDL----DE----------------------------AASLRLLGNCREAMAG 264 (334)
T ss_dssp ---EESCTTTC-CC-SSCSEEEEESCGGGC----CH----------------------------HHHHHHHHHHHHHSCT
T ss_pred ---ecCCCCCC-CC-CCCCEEEEchhccCC----CH----------------------------HHHHHHHHHHHHhcCC
Confidence 44588773 45 7899999999998 6 32 1224477777889999
Q ss_pred CceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEE
Q 017514 211 EGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEV 288 (370)
Q Consensus 211 GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~ 288 (370)
||++++.-...++.... .....++. . -|...| -..++.+|+++.+++.| |++.+...
T Consensus 265 gG~l~i~e~~~~~~~~~--~~~~~~~~----~-~~~~~~-------------~~~~t~~e~~~ll~~aG-f~~~~~~~ 321 (334)
T 2ip2_A 265 DGRVVVIERTISASEPS--PMSVLWDV----H-LFMACA-------------GRHRTTEEVVDLLGRGG-FAVERIVD 321 (334)
T ss_dssp TCEEEEEECCBCSSSCC--HHHHHHHH----H-HHHHHS-------------CCCCBHHHHHHHHHHTT-EEEEEEEE
T ss_pred CCEEEEEEeccCCCCCc--chhHHhhh----H-hHhhCC-------------CcCCCHHHHHHHHHHCC-CceeEEEE
Confidence 99999987655443211 11111221 1 111101 13468999999999999 98876653
|
| >3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei} | Back alignment and structure |
|---|
Probab=98.52 E-value=2.5e-06 Score=78.91 Aligned_cols=168 Identities=9% Similarity=0.004 Sum_probs=94.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCc-----hHHHHHhhHHHHHHHHHhhCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGND-----FNTIFRSLASFQKILRKQLGSAS 124 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~ND-----FntLF~~l~~~~~~~~~~~~~~~ 124 (370)
...+|+|+|||+|..+..+. +++ | |..+|+.-|+.... .-...+ ..+. ..+...
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~--------~~~---g---~~~~v~gvD~s~~~~~~~~~~~~a~------~~~~-~~~~~~ 101 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVLA--------DQV---G---SSGHVTGIDIASPDYGAPLTLGQAW------NHLL-AGPLGD 101 (275)
T ss_dssp TTCEEEEESCTTSHHHHHHH--------HHH---C---TTCEEEEECSSCTTCCSSSCHHHHH------HHHH-TSTTGG
T ss_pred CCCEEEEeCCCCCHHHHHHH--------HHh---C---CCCEEEEEECCccccccHHHHHHHH------HHHH-hcCCCC
Confidence 34799999999999888665 332 1 34678888875331 111111 1111 111100
Q ss_pred CCCCceEEeecCCC-cccc-c-CCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHH
Q 017514 125 GAAGQCFFTGVPGS-FYGR-L-FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFL 201 (370)
Q Consensus 125 ~~~~~~f~~~vpgS-Fy~~-l-~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL 201 (370)
+-.|. .++ +... + +|++++|+++|..++|++.. |. .++
T Consensus 102 ---~v~~~---~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~-~~--------------------------------~~~ 142 (275)
T 3bkx_A 102 ---RLTVH---FNTNLSDDLGPIADQHFDRVVLAHSLWYFAS-AN--------------------------------ALA 142 (275)
T ss_dssp ---GEEEE---CSCCTTTCCGGGTTCCCSEEEEESCGGGSSC-HH--------------------------------HHH
T ss_pred ---ceEEE---ECChhhhccCCCCCCCEEEEEEccchhhCCC-HH--------------------------------HHH
Confidence 11332 234 4322 2 36789999999999999644 10 134
Q ss_pred HHHHHhhccCceEEEEeeccCCCCCCCchhhhHHHHHHH-HHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCc
Q 017514 202 KCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLAT-ALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGS 280 (370)
Q Consensus 202 ~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~-al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~Gs 280 (370)
+...+=++|||++++.........+ .....++..+.+ .+... . ..........++.++++..+++.|
T Consensus 143 ~~~~~l~~~gG~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~s~~~l~~~l~~aG- 210 (275)
T 3bkx_A 143 LLFKNMAAVCDHVDVAEWSMQPTAL--DQIGHLQAAMIQGLLYAI-A--------PSDVANIRTLITPDTLAQIAHDNT- 210 (275)
T ss_dssp HHHHHHTTTCSEEEEEEECSSCSSG--GGHHHHHHHHHHHHHHHH-S--------CCTTCSCCCCCCHHHHHHHHHHHT-
T ss_pred HHHHHHhCCCCEEEEEEecCCCCch--hhhhHHHHHHHHHHHhhc-c--------ccccccccccCCHHHHHHHHHHCC-
Confidence 4444445569999999887654422 111112222222 22111 1 011223445789999999999999
Q ss_pred eEEEEEEEE
Q 017514 281 FTIDHLEVS 289 (370)
Q Consensus 281 F~i~~le~~ 289 (370)
|++.+.+.+
T Consensus 211 f~~~~~~~~ 219 (275)
T 3bkx_A 211 WTYTAGTIV 219 (275)
T ss_dssp CEEEECCCB
T ss_pred CeeEEEEEe
Confidence 998877765
|
| >1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43 | Back alignment and structure |
|---|
Probab=98.51 E-value=1.3e-06 Score=78.83 Aligned_cols=106 Identities=13% Similarity=0.138 Sum_probs=68.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhC-CCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLG-SASGAAG 128 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~-~~~~~~~ 128 (370)
...+|+|+|||+|..+..+. +. ..+++.-|+. +.......+... ... +
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~--------~~---------~~~~~~~D~s-----------~~~~~~a~~~~~~~~~---~ 85 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLC--------PK---------FKNTWAVDLS-----------QEMLSEAENKFRSQGL---K 85 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHG--------GG---------SSEEEEECSC-----------HHHHHHHHHHHHHTTC---C
T ss_pred CCCeEEEeCCCCCHHHHHHH--------HC---------CCcEEEEECC-----------HHHHHHHHHHHhhcCC---C
Confidence 45799999999999988665 21 1467788874 222221111111 000 1
Q ss_pred ceEEeecCCCcccccCCCCceeEEEecc-ccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSY-SLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~~-alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~E 207 (370)
-.|. .+++..-.+| +++|+++++. +|||+.. | .|...+|+.-++-
T Consensus 86 ~~~~---~~d~~~~~~~-~~fD~v~~~~~~l~~~~~-~-----------------------------~~~~~~l~~~~~~ 131 (246)
T 1y8c_A 86 PRLA---CQDISNLNIN-RKFDLITCCLDSTNYIID-S-----------------------------DDLKKYFKAVSNH 131 (246)
T ss_dssp CEEE---CCCGGGCCCS-CCEEEEEECTTGGGGCCS-H-----------------------------HHHHHHHHHHHTT
T ss_pred eEEE---ecccccCCcc-CCceEEEEcCccccccCC-H-----------------------------HHHHHHHHHHHHh
Confidence 2333 3366432334 8999999998 9999632 1 2455688888899
Q ss_pred hccCceEEEEeec
Q 017514 208 LVAEGRMVLTFLG 220 (370)
Q Consensus 208 L~~GG~lvl~~~g 220 (370)
|+|||++++.+..
T Consensus 132 L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 132 LKEGGVFIFDINS 144 (246)
T ss_dssp EEEEEEEEEEEEC
T ss_pred cCCCcEEEEEecC
Confidence 9999999998764
|
| >3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=98.51 E-value=2e-06 Score=81.63 Aligned_cols=166 Identities=13% Similarity=0.080 Sum_probs=98.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCC-
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG- 128 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~- 128 (370)
...+|+|+|||+|..++.+. . ...|..+|+.-|+- +.......+..... +...
T Consensus 118 ~~~~vLDiGcG~G~~~~~la--------~------~~~~~~~v~gvD~s-----------~~~~~~a~~~~~~~-~~~~~ 171 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALD--------Y------SACPGVQLVGIDYD-----------PEALDGATRLAAGH-ALAGQ 171 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSC--------C------TTCTTCEEEEEESC-----------HHHHHHHHHHHTTS-TTGGG
T ss_pred CCCEEEEecCCCCHHHHHHH--------H------hcCCCCeEEEEECC-----------HHHHHHHHHHHHhc-CCCCc
Confidence 45799999999998877542 0 12255788998985 33322222222110 0001
Q ss_pred ceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
-.|.. +++.+--++ +++|+++++.++||+.. | .....||+.-.+-|
T Consensus 172 v~~~~---~d~~~~~~~-~~fD~v~~~~~~~~~~~-~-----------------------------~~~~~~l~~~~~~L 217 (305)
T 3ocj_A 172 ITLHR---QDAWKLDTR-EGYDLLTSNGLNIYEPD-D-----------------------------ARVTELYRRFWQAL 217 (305)
T ss_dssp EEEEE---CCGGGCCCC-SCEEEEECCSSGGGCCC-H-----------------------------HHHHHHHHHHHHHE
T ss_pred eEEEE---CchhcCCcc-CCeEEEEECChhhhcCC-H-----------------------------HHHHHHHHHHHHhc
Confidence 23433 477554445 99999999999998533 1 12234677778899
Q ss_pred ccCceEEEEeeccCCCCCCCc-----hhh-hHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceE
Q 017514 209 VAEGRMVLTFLGRKSQDPSSK-----ECC-YIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFT 282 (370)
Q Consensus 209 ~~GG~lvl~~~g~~~~~~~~~-----~~~-~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~ 282 (370)
+|||++++...+++....... ... .........+.+....+ -..+++.+|++..+++.| |+
T Consensus 218 kpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~l~~aG-F~ 284 (305)
T 3ocj_A 218 KPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPR------------WNALRTHAQTRAQLEEAG-FT 284 (305)
T ss_dssp EEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCS------------CCCCCCHHHHHHHHHHTT-CE
T ss_pred CCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhh------------hhccCCHHHHHHHHHHCC-CE
Confidence 999999999887654422111 100 01112222222221111 114579999999999999 98
Q ss_pred EEEEEE
Q 017514 283 IDHLEV 288 (370)
Q Consensus 283 i~~le~ 288 (370)
+.+++.
T Consensus 285 ~v~~~~ 290 (305)
T 3ocj_A 285 DLRFED 290 (305)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 877764
|
| >3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=98.50 E-value=5.7e-07 Score=81.43 Aligned_cols=169 Identities=18% Similarity=0.236 Sum_probs=93.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
...+|+|+|||+|..+..+. +. + . -+|+..|+. +.......+..... +-
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~--------~~----~---~-~~v~~vD~s-----------~~~~~~a~~~~~~~----~~ 91 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAH--------EH----G---A-SYVLGLDLS-----------EKMLARARAAGPDT----GI 91 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHH--------HT----T---C-SEEEEEESC-----------HHHHHHHHHTSCSS----SE
T ss_pred CCCEEEEEcCcCCHHHHHHH--------HC----C---C-CeEEEEcCC-----------HHHHHHHHHhcccC----Cc
Confidence 35799999999999877655 22 1 1 277888874 33322222221110 12
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
.|.. +++..-.+|++++|+++++.++||+.. ...+|+.-++-|+
T Consensus 92 ~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~---------------------------------~~~~l~~~~~~L~ 135 (243)
T 3bkw_A 92 TYER---ADLDKLHLPQDSFDLAYSSLALHYVED---------------------------------VARLFRTVHQALS 135 (243)
T ss_dssp EEEE---CCGGGCCCCTTCEEEEEEESCGGGCSC---------------------------------HHHHHHHHHHHEE
T ss_pred eEEE---cChhhccCCCCCceEEEEeccccccch---------------------------------HHHHHHHHHHhcC
Confidence 3333 366444467899999999999999632 1126677788899
Q ss_pred cCceEEEEeeccCCCCCCCchhhhHHHHHH-HH--HHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEE
Q 017514 210 AEGRMVLTFLGRKSQDPSSKECCYIWELLA-TA--LNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHL 286 (370)
Q Consensus 210 ~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~-~a--l~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~l 286 (370)
|||++++.............. ...+.-. .. +.....++..... ...-....|.+|.+|+.+.+++.| |++..+
T Consensus 136 pgG~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~t~~~~~~~l~~aG-F~~~~~ 211 (243)
T 3bkw_A 136 PGGHFVFSTEHPIYMAPARPG--WAIDAEGRRTWPIDRYLVEGPRKTD-WLAKGVVKHHRTVGTTLNALIRSG-FAIEHV 211 (243)
T ss_dssp EEEEEEEEEECHHHHCCSSCS--CEECTTSCEEEEECCTTCCEEECTT-HHHHSCCEEECCHHHHHHHHHHTT-CEEEEE
T ss_pred cCcEEEEEeCCcccccCcCcc--eeecCCCceEEeecccccccceeee-eccCceEEEeccHHHHHHHHHHcC-CEeeee
Confidence 999999987532110000000 0000000 00 0000000000000 000034567789999999999999 998877
Q ss_pred EEE
Q 017514 287 EVS 289 (370)
Q Consensus 287 e~~ 289 (370)
+..
T Consensus 212 ~~~ 214 (243)
T 3bkw_A 212 EEF 214 (243)
T ss_dssp EEC
T ss_pred ccC
Confidence 654
|
| >1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A* | Back alignment and structure |
|---|
Probab=98.49 E-value=4.2e-06 Score=81.33 Aligned_cols=158 Identities=16% Similarity=0.154 Sum_probs=92.6
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (370)
++..+|+|+|||+|..+..+. +.+ |..+++.-|+| ...... ..... ..+..- +
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~--------~~~-------~~~~~~~~D~~-----~~~~~a---~~~~~-~~~~~~---~ 233 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIA--------LRA-------PHLRGTLVELA-----GPAERA---RRRFA-DAGLAD---R 233 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHH--------HHC-------TTCEEEEEECH-----HHHHHH---HHHHH-HTTCTT---T
T ss_pred CCCCEEEEECCCcCHHHHHHH--------HHC-------CCCEEEEEeCH-----HHHHHH---HHHHH-hcCCCC---c
Confidence 346899999999998877665 332 45788888874 111111 11111 112110 2
Q ss_pred ceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
-.| +.+++.+. +|.+ +|++++...+|+++. .+...+|+.-.+-|
T Consensus 234 v~~---~~~d~~~~-~~~~-~D~v~~~~vl~~~~~-------------------------------~~~~~~l~~~~~~L 277 (374)
T 1qzz_A 234 VTV---AEGDFFKP-LPVT-ADVVLLSFVLLNWSD-------------------------------EDALTILRGCVRAL 277 (374)
T ss_dssp EEE---EECCTTSC-CSCC-EEEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHHE
T ss_pred eEE---EeCCCCCc-CCCC-CCEEEEeccccCCCH-------------------------------HHHHHHHHHHHHhc
Confidence 234 34588663 4554 999999999986322 12234777778999
Q ss_pred ccCceEEEEee--ccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEE
Q 017514 209 VAEGRMVLTFL--GRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHL 286 (370)
Q Consensus 209 ~~GG~lvl~~~--g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~l 286 (370)
+|||++++.-. ..++.. ...+..+...+. ++..| ...++.+|+++.+++.| |++.++
T Consensus 278 ~pgG~l~i~e~~~~~~~~~------~~~~~~~~~~~~-~~~~~-------------~~~~~~~~~~~ll~~aG-f~~~~~ 336 (374)
T 1qzz_A 278 EPGGRLLVLDRADVEGDGA------DRFFSTLLDLRM-LTFMG-------------GRVRTRDEVVDLAGSAG-LALASE 336 (374)
T ss_dssp EEEEEEEEEECCH-------------HHHHHHHHHHH-HHHHS-------------CCCCCHHHHHHHHHTTT-EEEEEE
T ss_pred CCCcEEEEEechhhcCCCC------CcchhhhcchHH-HHhCC-------------CcCCCHHHHHHHHHHCC-CceEEE
Confidence 99999998766 433221 011221111111 11111 24579999999999999 998877
Q ss_pred EEEe
Q 017514 287 EVSE 290 (370)
Q Consensus 287 e~~~ 290 (370)
....
T Consensus 337 ~~~~ 340 (374)
T 1qzz_A 337 RTSG 340 (374)
T ss_dssp EEEC
T ss_pred EECC
Confidence 7654
|
| >2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=98.49 E-value=3.6e-06 Score=80.32 Aligned_cols=158 Identities=17% Similarity=0.150 Sum_probs=93.9
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (370)
.+..+|+|+|||+|..+..+. +++ |..+++.-|++ +.-...+. .... .+..- +
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~--------~~~-------p~~~~~~~D~~--~~~~~a~~------~~~~-~~~~~---~ 216 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVA--------QHN-------PNAEIFGVDWA--SVLEVAKE------NARI-QGVAS---R 216 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHH--------HHC-------TTCEEEEEECH--HHHHHHHH------HHHH-HTCGG---G
T ss_pred CCCCEEEEECCCcCHHHHHHH--------HHC-------CCCeEEEEecH--HHHHHHHH------HHHh-cCCCc---c
Confidence 356899999999998777655 332 45789999985 22211111 1111 12110 1
Q ss_pred ceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
-.| +.+++..--+|.+ .|++++.+.+|.++. .+...+|+.-.+-|
T Consensus 217 v~~---~~~d~~~~~~~~~-~D~v~~~~~l~~~~~-------------------------------~~~~~~l~~~~~~L 261 (335)
T 2r3s_A 217 YHT---IAGSAFEVDYGND-YDLVLLPNFLHHFDV-------------------------------ATCEQLLRKIKTAL 261 (335)
T ss_dssp EEE---EESCTTTSCCCSC-EEEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHHE
T ss_pred eEE---EecccccCCCCCC-CcEEEEcchhccCCH-------------------------------HHHHHHHHHHHHhC
Confidence 234 3447765434444 999999999997422 23445777778899
Q ss_pred ccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEE
Q 017514 209 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLE 287 (370)
Q Consensus 209 ~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le 287 (370)
+|||++++.-...++..... .+..+...+ -|... .....++.+|+++.+++.| |++.++.
T Consensus 262 ~pgG~l~i~e~~~~~~~~~~-----~~~~~~~~~-~~~~~------------~~~~~~t~~~~~~ll~~aG-f~~~~~~ 321 (335)
T 2r3s_A 262 AVEGKVIVFDFIPNSDRITP-----PDAAAFSLV-MLATT------------PNGDAYTFAEYESMFSNAG-FSHSQLH 321 (335)
T ss_dssp EEEEEEEEEECCCCTTSSCS-----HHHHHHHHH-HHHHS------------SSCCCCCHHHHHHHHHHTT-CSEEEEE
T ss_pred CCCcEEEEEeecCCCCcCCc-----hHHHHHHHH-HHeeC------------CCCCcCCHHHHHHHHHHCC-CCeeeEE
Confidence 99999998876655431111 111111111 11111 0124579999999999999 8876654
|
| >3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A* | Back alignment and structure |
|---|
Probab=98.48 E-value=1e-06 Score=81.31 Aligned_cols=106 Identities=15% Similarity=0.175 Sum_probs=70.0
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (370)
++..+|+|+|||+|..+..+. +. -.+|+.-|+- +.......+... +
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~gvD~s-----------~~~~~~a~~~~~------~ 94 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLA--------DS---------FGTVEGLELS-----------ADMLAIARRRNP------D 94 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHT--------TT---------SSEEEEEESC-----------HHHHHHHHHHCT------T
T ss_pred CCCCcEEEeCCcCCHHHHHHH--------Hc---------CCeEEEEECC-----------HHHHHHHHhhCC------C
Confidence 345799999999999887655 21 1467777874 332222222211 1
Q ss_pred ceEEeecCCCcccccCCCCceeEEEecc-ccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSY-SLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~~-alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~E 207 (370)
-.|+.+ ++.. +.+++++|+++++. +|||+.. | +|+..+|+.-++-
T Consensus 95 ~~~~~~---d~~~-~~~~~~fD~v~~~~~~l~~~~~-~-----------------------------~~~~~~l~~~~~~ 140 (263)
T 3pfg_A 95 AVLHHG---DMRD-FSLGRRFSAVTCMFSSIGHLAG-Q-----------------------------AELDAALERFAAH 140 (263)
T ss_dssp SEEEEC---CTTT-CCCSCCEEEEEECTTGGGGSCH-H-----------------------------HHHHHHHHHHHHT
T ss_pred CEEEEC---ChHH-CCccCCcCEEEEcCchhhhcCC-H-----------------------------HHHHHHHHHHHHh
Confidence 244444 5533 34478999999998 9999643 1 3556688888999
Q ss_pred hccCceEEEEeeccC
Q 017514 208 LVAEGRMVLTFLGRK 222 (370)
Q Consensus 208 L~~GG~lvl~~~g~~ 222 (370)
|+|||++++.....+
T Consensus 141 L~pgG~l~i~~~~~~ 155 (263)
T 3pfg_A 141 VLPDGVVVVEPWWFP 155 (263)
T ss_dssp EEEEEEEEECCCCCT
T ss_pred cCCCcEEEEEeccCh
Confidence 999999999754433
|
| >3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=98.48 E-value=3.3e-06 Score=73.15 Aligned_cols=127 Identities=17% Similarity=0.203 Sum_probs=84.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
...+|+|+|||+|..+..+. +. ..+++..|.- +.......+... +-
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~--------~~---------~~~v~~~D~~-----------~~~~~~a~~~~~------~~ 91 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLS--------KQ---------GHDVLGTDLD-----------PILIDYAKQDFP------EA 91 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHH--------HT---------TCEEEEEESC-----------HHHHHHHHHHCT------TS
T ss_pred CCCeEEEECCCCCHHHHHHH--------HC---------CCcEEEEcCC-----------HHHHHHHHHhCC------CC
Confidence 45799999999999887665 21 1467777764 322222222111 12
Q ss_pred eEEeecCCCcccccCCCCceeEEEec-cccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSS-YSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~-~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
.|..+ ++..--+|++++|+++++ ..+|+++. .+...+|+.-.+-|
T Consensus 92 ~~~~~---d~~~~~~~~~~~D~i~~~~~~~~~~~~-------------------------------~~~~~~l~~~~~~l 137 (195)
T 3cgg_A 92 RWVVG---DLSVDQISETDFDLIVSAGNVMGFLAE-------------------------------DGREPALANIHRAL 137 (195)
T ss_dssp EEEEC---CTTTSCCCCCCEEEEEECCCCGGGSCH-------------------------------HHHHHHHHHHHHHE
T ss_pred cEEEc---ccccCCCCCCceeEEEECCcHHhhcCh-------------------------------HHHHHHHHHHHHHh
Confidence 34333 554434678899999998 67887422 23445788888999
Q ss_pred ccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEE
Q 017514 209 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLE 287 (370)
Q Consensus 209 ~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le 287 (370)
+|||++++....... .+.+++...+++.| |++.+..
T Consensus 138 ~~~G~l~~~~~~~~~------------------------------------------~~~~~~~~~l~~~G-f~~~~~~ 173 (195)
T 3cgg_A 138 GADGRAVIGFGAGRG------------------------------------------WVFGDFLEVAERVG-LELENAF 173 (195)
T ss_dssp EEEEEEEEEEETTSS------------------------------------------CCHHHHHHHHHHHT-EEEEEEE
T ss_pred CCCCEEEEEeCCCCC------------------------------------------cCHHHHHHHHHHcC-CEEeeee
Confidence 999999998753210 57899999999999 8876654
|
| >1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=9.2e-06 Score=78.83 Aligned_cols=160 Identities=13% Similarity=0.089 Sum_probs=95.7
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (370)
++..+|+|+|||+|..+..+. +++ |..+++.-|+| .. +......... .+... +
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~--------~~~-------p~~~~~~~D~~--~~------~~~a~~~~~~-~~~~~---~ 241 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAML--------KHF-------PELDSTILNLP--GA------IDLVNENAAE-KGVAD---R 241 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHH--------HHC-------TTCEEEEEECG--GG------HHHHHHHHHH-TTCTT---T
T ss_pred CCCCEEEEECCcccHHHHHHH--------HHC-------CCCeEEEEecH--HH------HHHHHHHHHh-cCCCC---C
Confidence 356799999999999888766 332 45788888985 11 1111111111 12110 1
Q ss_pred ceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
-.| +.+++.+--+|+. |++++...+|.+ |+ ++...+|+.-.+-|
T Consensus 242 v~~---~~~d~~~~~~~~~--D~v~~~~vlh~~---~d----------------------------~~~~~~l~~~~~~L 285 (359)
T 1x19_A 242 MRG---IAVDIYKESYPEA--DAVLFCRILYSA---NE----------------------------QLSTIMCKKAFDAM 285 (359)
T ss_dssp EEE---EECCTTTSCCCCC--SEEEEESCGGGS---CH----------------------------HHHHHHHHHHHTTC
T ss_pred EEE---EeCccccCCCCCC--CEEEEechhccC---CH----------------------------HHHHHHHHHHHHhc
Confidence 234 3458876545554 999999999842 31 23455788888999
Q ss_pred ccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEE
Q 017514 209 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEV 288 (370)
Q Consensus 209 ~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~ 288 (370)
+|||++++.-...++.. . ..+..+. .|... ...-.....+++.+|+++.+++.| |++.+...
T Consensus 286 ~pgG~l~i~e~~~~~~~-~-----~~~~~~~----~~~~~-------~~~g~~~~~~~t~~e~~~ll~~aG-f~~v~~~~ 347 (359)
T 1x19_A 286 RSGGRLLILDMVIDDPE-N-----PNFDYLS----HYILG-------AGMPFSVLGFKEQARYKEILESLG-YKDVTMVR 347 (359)
T ss_dssp CTTCEEEEEEECCCCTT-S-----CCHHHHH----HHGGG-------GGSSCCCCCCCCGGGHHHHHHHHT-CEEEEEEE
T ss_pred CCCCEEEEEecccCCCC-C-----chHHHHH----HHHHh-------cCCCCcccCCCCHHHHHHHHHHCC-CceEEEEe
Confidence 99999988766554331 1 0111111 22110 000111234589999999999999 98876654
Q ss_pred E
Q 017514 289 S 289 (370)
Q Consensus 289 ~ 289 (370)
.
T Consensus 348 ~ 348 (359)
T 1x19_A 348 K 348 (359)
T ss_dssp E
T ss_pred c
Confidence 3
|
| >2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A | Back alignment and structure |
|---|
Probab=98.45 E-value=2e-06 Score=75.98 Aligned_cols=140 Identities=14% Similarity=0.065 Sum_probs=90.8
Q ss_pred EEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHh---hCCCCCCCCc
Q 017514 53 AIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQ---LGSASGAAGQ 129 (370)
Q Consensus 53 ~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~---~~~~~~~~~~ 129 (370)
+|+|+|||+|..+..+. +. ..+|+.-|+. +.......+. .+. +-
T Consensus 32 ~vLdiGcG~G~~~~~l~--------~~---------~~~v~~vD~s-----------~~~~~~a~~~~~~~~~-----~~ 78 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLA--------SL---------GYEVTAVDQS-----------SVGLAKAKQLAQEKGV-----KI 78 (202)
T ss_dssp EEEECCCSCTHHHHHHH--------TT---------TCEEEEECSS-----------HHHHHHHHHHHHHHTC-----CE
T ss_pred CEEEECCCCCHhHHHHH--------hC---------CCeEEEEECC-----------HHHHHHHHHHHHhcCC-----ce
Confidence 99999999999887655 21 1578888874 2221111111 121 12
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
.|.. +++..--+|++++|+++++. .|| +. .|...+|+.-.+-|+
T Consensus 79 ~~~~---~d~~~~~~~~~~fD~v~~~~-~~~----~~----------------------------~~~~~~l~~~~~~L~ 122 (202)
T 2kw5_A 79 TTVQ---SNLADFDIVADAWEGIVSIF-CHL----PS----------------------------SLRQQLYPKVYQGLK 122 (202)
T ss_dssp EEEC---CBTTTBSCCTTTCSEEEEEC-CCC----CH----------------------------HHHHHHHHHHHTTCC
T ss_pred EEEE---cChhhcCCCcCCccEEEEEh-hcC----CH----------------------------HHHHHHHHHHHHhcC
Confidence 3333 35544346788999999853 344 21 244557888889999
Q ss_pred cCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEEE
Q 017514 210 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 289 (370)
Q Consensus 210 ~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~ 289 (370)
|||++++......+.. + ..| ....+.++.+.+|+++.++ | |++..++..
T Consensus 123 pgG~l~~~~~~~~~~~---------~-----------~~~--------~~~~~~~~~~~~~l~~~l~--G-f~v~~~~~~ 171 (202)
T 2kw5_A 123 PGGVFILEGFAPEQLQ---------Y-----------NTG--------GPKDLDLLPKLETLQSELP--S-LNWLIANNL 171 (202)
T ss_dssp SSEEEEEEEECTTTGG---------G-----------TSC--------CSSSGGGCCCHHHHHHHCS--S-SCEEEEEEE
T ss_pred CCcEEEEEEecccccc---------C-----------CCC--------CCCcceeecCHHHHHHHhc--C-ceEEEEEEE
Confidence 9999999998754320 0 011 1124578899999999999 7 999999887
Q ss_pred eec
Q 017514 290 EVN 292 (370)
Q Consensus 290 ~~~ 292 (370)
..+
T Consensus 172 ~~~ 174 (202)
T 2kw5_A 172 ERN 174 (202)
T ss_dssp EEE
T ss_pred Eee
Confidence 665
|
| >2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=2.5e-06 Score=78.20 Aligned_cols=97 Identities=15% Similarity=0.120 Sum_probs=66.1
Q ss_pred CCccccc-CCC---CceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCc
Q 017514 137 GSFYGRL-FPR---NSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEG 212 (370)
Q Consensus 137 gSFy~~l-~p~---~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG 212 (370)
+++.+-. +|+ +++|+++++.+||++..- ..|+..+|+.-.+-|+|||
T Consensus 142 ~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~-----------------------------~~~~~~~l~~~~~~LkpgG 192 (265)
T 2i62_A 142 CDVTQSQPLGGVSLPPADCLLSTLCLDAACPD-----------------------------LPAYRTALRNLGSLLKPGG 192 (265)
T ss_dssp CCTTSSSTTTTCCCCCEEEEEEESCHHHHCSS-----------------------------HHHHHHHHHHHHTTEEEEE
T ss_pred eeeccCCCCCccccCCccEEEEhhhhhhhcCC-----------------------------hHHHHHHHHHHHhhCCCCc
Confidence 3554432 256 899999999999975321 0345567888889999999
Q ss_pred eEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEEEeec
Q 017514 213 RMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVN 292 (370)
Q Consensus 213 ~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~~~~ 292 (370)
+|++......+ . + ..| ....+.+..+.+++...+++.| |++..++.....
T Consensus 193 ~li~~~~~~~~--~--------~-----------~~~--------~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~~~~ 242 (265)
T 2i62_A 193 FLVMVDALKSS--Y--------Y-----------MIG--------EQKFSSLPLGWETVRDAVEEAG-YTIEQFEVISQN 242 (265)
T ss_dssp EEEEEEESSCC--E--------E-----------EET--------TEEEECCCCCHHHHHHHHHHTT-CEEEEEEEECCC
T ss_pred EEEEEecCCCc--e--------E-----------EcC--------CccccccccCHHHHHHHHHHCC-CEEEEEEEeccc
Confidence 99998743221 0 0 001 1122345678999999999999 999988877543
|
| >3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A | Back alignment and structure |
|---|
Probab=98.42 E-value=4.9e-06 Score=74.45 Aligned_cols=154 Identities=17% Similarity=0.087 Sum_probs=88.4
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCC-CCC---C
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGS-ASG---A 126 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~-~~~---~ 126 (370)
..+|+|+|||+|..+..+. +. .|..+|+.-|+. +...+...+.... ... .
T Consensus 30 ~~~vLDiGcG~G~~~~~l~--------~~-------~~~~~v~gvD~s-----------~~~~~~a~~~~~~~~~~~~~~ 83 (219)
T 3jwg_A 30 AKKVIDLGCGEGNLLSLLL--------KD-------KSFEQITGVDVS-----------YSVLERAKDRLKIDRLPEMQR 83 (219)
T ss_dssp CCEEEEETCTTCHHHHHHH--------TS-------TTCCEEEEEESC-----------HHHHHHHHHHHTGGGSCHHHH
T ss_pred CCEEEEecCCCCHHHHHHH--------hc-------CCCCEEEEEECC-----------HHHHHHHHHHHHhhccccccC
Confidence 4699999999999887665 22 134788888885 3322222221110 000 0
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
.+-.|..+ ++...-++++++|+++++.++||+.. .++..+|+.-++
T Consensus 84 ~~v~~~~~---d~~~~~~~~~~fD~V~~~~~l~~~~~-------------------------------~~~~~~l~~~~~ 129 (219)
T 3jwg_A 84 KRISLFQS---SLVYRDKRFSGYDAATVIEVIEHLDE-------------------------------NRLQAFEKVLFE 129 (219)
T ss_dssp TTEEEEEC---CSSSCCGGGTTCSEEEEESCGGGCCH-------------------------------HHHHHHHHHHHT
T ss_pred cceEEEeC---cccccccccCCCCEEEEHHHHHhCCH-------------------------------HHHHHHHHHHHH
Confidence 01234333 55444456789999999999999632 234557888889
Q ss_pred hhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHH----HHHHhcCceE
Q 017514 207 ELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIK----SEVIKEGSFT 282 (370)
Q Consensus 207 EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~----~~ie~~GsF~ 282 (370)
-|+|||+++.+.....+.. |..+.. +. ....-..+..+.+|++ .++++.| |+
T Consensus 130 ~LkpgG~~i~~~~~~~~~~---------~~~~~~--------~~------~~~~~~~~~~~~~~l~~~~~~l~~~~G-f~ 185 (219)
T 3jwg_A 130 FTRPQTVIVSTPNKEYNFH---------YGNLFE--------GN------LRHRDHRFEWTRKEFQTWAVKVAEKYG-YS 185 (219)
T ss_dssp TTCCSEEEEEEEBGGGGGC---------CCCT-------------------GGGCCTTSBCHHHHHHHHHHHHHHHT-EE
T ss_pred hhCCCEEEEEccchhhhhh---------hcccCc--------cc------ccccCceeeecHHHHHHHHHHHHHHCC-cE
Confidence 9999996555443221110 100000 00 0011233456899999 7788888 87
Q ss_pred EEEEEE
Q 017514 283 IDHLEV 288 (370)
Q Consensus 283 i~~le~ 288 (370)
++...+
T Consensus 186 v~~~~~ 191 (219)
T 3jwg_A 186 VRFLQI 191 (219)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 766543
|
| >3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=3.2e-06 Score=80.26 Aligned_cols=179 Identities=15% Similarity=0.199 Sum_probs=103.2
Q ss_pred HHHHHHHHHhhcccCCCCceEEEeecCCC--CcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhH
Q 017514 33 KPITEEAMTKLFCSTSPTKVAIADLGCSS--GPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLA 110 (370)
Q Consensus 33 ~~~l~~ai~~~~~~~~~~~~~IaD~Gcs~--G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~ 110 (370)
...+..+++-+.. ..+.-+|+|+|||. +.|+..+. ++. .|..+|+.-|.- |
T Consensus 63 r~fl~rav~~l~~--~~g~~q~LDLGcG~pT~~~~~~la--------~~~------~P~arVv~VD~s-----------p 115 (277)
T 3giw_A 63 RDWMNRAVAHLAK--EAGIRQFLDIGTGIPTSPNLHEIA--------QSV------APESRVVYVDND-----------P 115 (277)
T ss_dssp HHHHHHHHHHHHH--TSCCCEEEEESCCSCCSSCHHHHH--------HHH------CTTCEEEEEECC-----------H
T ss_pred HHHHHHHHHHhcc--ccCCCEEEEeCCCCCcccHHHHHH--------HHH------CCCCEEEEEeCC-----------h
Confidence 3444444444432 23567999999998 77877655 221 156889888874 4
Q ss_pred HHHHHHHHhhCCCCCCCCceEEeecCCCcccc--cC--C--CCcee-----EEEeccccccccCCCCCccCCCceeeecC
Q 017514 111 SFQKILRKQLGSASGAAGQCFFTGVPGSFYGR--LF--P--RNSVH-----LFHSSYSLQWLSQVPDGLESNKGNIFMAS 179 (370)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~--l~--p--~~sv~-----~~~S~~alhWls~~P~~~~~nk~~i~~~~ 179 (370)
.....-........ ..+-.|+.+ ++..- ++ | .+++| .++++.+||||..-.
T Consensus 116 ~mLa~Ar~~l~~~~-~~~~~~v~a---D~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~-------------- 177 (277)
T 3giw_A 116 IVLTLSQGLLASTP-EGRTAYVEA---DMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDED-------------- 177 (277)
T ss_dssp HHHHTTHHHHCCCS-SSEEEEEEC---CTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGG--------------
T ss_pred HHHHHHHHHhccCC-CCcEEEEEe---cccChhhhhcccccccccCcCCcchHHhhhhHhcCCchh--------------
Confidence 33221111112110 002346555 55331 11 1 34555 488999999975521
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccC
Q 017514 180 TSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCF 259 (370)
Q Consensus 180 ~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f 259 (370)
|....|+.-.+-|+|||+|+++.++.+.. + + ..+.+.+.++ . -
T Consensus 178 ----------------~p~~~l~~l~~~L~PGG~Lvls~~~~d~~-p---~---~~~~~~~~~~---~-----------~ 220 (277)
T 3giw_A 178 ----------------DAVGIVRRLLEPLPSGSYLAMSIGTAEFA-P---Q---EVGRVAREYA---A-----------R 220 (277)
T ss_dssp ----------------CHHHHHHHHHTTSCTTCEEEEEEECCTTS-H---H---HHHHHHHHHH---H-----------T
T ss_pred ----------------hHHHHHHHHHHhCCCCcEEEEEeccCCCC-H---H---HHHHHHHHHH---h-----------c
Confidence 11224556678899999999999876521 1 1 1223333332 1 2
Q ss_pred CcCcccCCHHHHHHHHHhcCceEEEEEEEEeec-cccc
Q 017514 260 NIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVN-WNAY 296 (370)
Q Consensus 260 ~~P~y~~s~eE~~~~ie~~GsF~i~~le~~~~~-w~~~ 296 (370)
..|+.++|.+|+.+.++ | |++..--+...+ |.+.
T Consensus 221 g~p~~~rs~~ei~~~f~--G-lelvePG~v~~~~Wrp~ 255 (277)
T 3giw_A 221 NMPMRLRTHAEAEEFFE--G-LELVEPGIVQVHKWHPD 255 (277)
T ss_dssp TCCCCCCCHHHHHHTTT--T-SEECTTCSEEGGGSSCC
T ss_pred CCCCccCCHHHHHHHhC--C-CcccCCcEeecccccCC
Confidence 35889999999999995 7 887665555443 7663
|
| >2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus} | Back alignment and structure |
|---|
Probab=98.41 E-value=2.4e-06 Score=81.81 Aligned_cols=182 Identities=11% Similarity=0.112 Sum_probs=97.0
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHh---hCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQ---LGSASG 125 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~---~~~~~~ 125 (370)
+...+|+|+|||+|..+...+ .. ...+|+--|+- +...+.-++. .+....
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~--------~~--------~~~~v~GiD~S-----------~~~l~~A~~~~~~~~~~~~ 99 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYF--------YG--------EIALLVATDPD-----------ADAIARGNERYNKLNSGIK 99 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHH--------HT--------TCSEEEEEESC-----------HHHHHHHHHHHHHHCC---
T ss_pred CCCCeEEEEecCCcHhHHHHH--------hc--------CCCeEEEEECC-----------HHHHHHHHHHHHhcccccc
Confidence 345799999999998765433 11 12578888875 3322211111 111000
Q ss_pred CC--CceEEee-cCCCcc-cc---cCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHH
Q 017514 126 AA--GQCFFTG-VPGSFY-GR---LFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFS 198 (370)
Q Consensus 126 ~~--~~~f~~~-vpgSFy-~~---l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~ 198 (370)
.. .--|..+ +-++-+ .. .+|++++|++.|..++||+-..+. ..
T Consensus 100 ~~~~~~~f~~~d~~~d~~~~~l~~~~~~~~FD~V~~~~~lhy~~~~~~------------------------------~~ 149 (302)
T 2vdw_A 100 TKYYKFDYIQETIRSDTFVSSVREVFYFGKFNIIDWQFAIHYSFHPRH------------------------------YA 149 (302)
T ss_dssp -CCCEEEEEECCTTSSSHHHHHHTTCCSSCEEEEEEESCGGGTCSTTT------------------------------HH
T ss_pred ccccccchhhhhcccchhhhhhhccccCCCeeEEEECchHHHhCCHHH------------------------------HH
Confidence 00 0124333 333333 22 368899999999999999654221 12
Q ss_pred HHHHHHHHhhccCceEEEEeeccCCCCCCCc-hhhhHHHHHHHHHHHHHhcCCcchhh-------hccCCcCcccCCHHH
Q 017514 199 LFLKCRSEELVAEGRMVLTFLGRKSQDPSSK-ECCYIWELLATALNNMVSEGLIEEEK-------VNCFNIPQYTPSPAE 270 (370)
Q Consensus 199 ~fL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~-~~~~~~~~l~~al~~mv~eG~i~~e~-------~d~f~~P~y~~s~eE 270 (370)
.+|+.-++-|+|||+|+++.+.+........ ..-.++... -.+.....-+.++.+. -..-..|-|..+++|
T Consensus 150 ~~l~~~~r~LkpGG~~i~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~v~~~e 228 (302)
T 2vdw_A 150 TVMNNLSELTASGGKVLITTMDGDKLSKLTDKKTFIIHKNL-PSSENYMSVEKIADDRIVVYNPSTMSTPMTEYIIKKND 228 (302)
T ss_dssp HHHHHHHHHEEEEEEEEEEEECHHHHTTCCSCEEEECCSSS-CTTTSEEEECEEETTEEEEBCTTTBSSCEEEECCCHHH
T ss_pred HHHHHHHHHcCCCCEEEEEeCCHHHHHHHHhcCCccccccc-ccccceeeeccccccccceeeccccCCCceeeeeEHHH
Confidence 4788889999999999999875432110000 000000000 0000000000000111 012345678888999
Q ss_pred HHHHHHhcCceEEEEEEEE
Q 017514 271 IKSEVIKEGSFTIDHLEVS 289 (370)
Q Consensus 271 ~~~~ie~~GsF~i~~le~~ 289 (370)
+++.+++.| |++.....+
T Consensus 229 l~~l~~~~G-l~lv~~~~f 246 (302)
T 2vdw_A 229 IVRVFNEYG-FVLVDNVDF 246 (302)
T ss_dssp HHHHHHHTT-EEEEEEEEH
T ss_pred HHHHHHHCC-CEEEEecCh
Confidence 999999999 988777655
|
| >4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A | Back alignment and structure |
|---|
Probab=98.40 E-value=3.5e-06 Score=82.96 Aligned_cols=111 Identities=20% Similarity=0.274 Sum_probs=72.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhh--------C
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL--------G 121 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~--------~ 121 (370)
...+|+|+|||+|..++.+. +.+ + |..+|+..|+- +.......+.. |
T Consensus 83 ~~~~VLDlGcG~G~~~~~la--------~~~---~---~~~~v~gvD~s-----------~~~l~~a~~~~~~~~~~~~g 137 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLAS--------KLV---G---EHGKVIGVDML-----------DNQLEVARKYVEYHAEKFFG 137 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHH--------HHH---T---TTCEEEEEECC-----------HHHHHHHHHTHHHHHHHHHS
T ss_pred CCCEEEEecCccCHHHHHHH--------HHh---C---CCCEEEEEECC-----------HHHHHHHHHHHHHhhhhccc
Confidence 45799999999999887665 332 1 34688999985 22222211110 2
Q ss_pred -CCCCCCCceEEeecCCCcccc------cCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHH
Q 017514 122 -SASGAAGQCFFTGVPGSFYGR------LFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQ 194 (370)
Q Consensus 122 -~~~~~~~~~f~~~vpgSFy~~------l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~ 194 (370)
... .+-.|..+ ++..- -+|++++|+++|+.++||+.. |
T Consensus 138 ~~~~--~~v~~~~~---d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~~d-~----------------------------- 182 (383)
T 4fsd_A 138 SPSR--SNVRFLKG---FIENLATAEPEGVPDSSVDIVISNCVCNLSTN-K----------------------------- 182 (383)
T ss_dssp STTC--CCEEEEES---CTTCGGGCBSCCCCTTCEEEEEEESCGGGCSC-H-----------------------------
T ss_pred ccCC--CceEEEEc---cHHHhhhcccCCCCCCCEEEEEEccchhcCCC-H-----------------------------
Confidence 100 02345444 55332 468899999999999999643 1
Q ss_pred HHHHHHHHHHHHhhccCceEEEEeeccCC
Q 017514 195 RDFSLFLKCRSEELVAEGRMVLTFLGRKS 223 (370)
Q Consensus 195 ~D~~~fL~~Ra~EL~~GG~lvl~~~g~~~ 223 (370)
..+|+.-.+-|+|||+|++..+....
T Consensus 183 ---~~~l~~~~r~LkpgG~l~i~~~~~~~ 208 (383)
T 4fsd_A 183 ---LALFKEIHRVLRDGGELYFSDVYADR 208 (383)
T ss_dssp ---HHHHHHHHHHEEEEEEEEEEEEEESS
T ss_pred ---HHHHHHHHHHcCCCCEEEEEEecccc
Confidence 13677778899999999998776654
|
| >1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=1.1e-05 Score=78.92 Aligned_cols=153 Identities=15% Similarity=0.168 Sum_probs=92.7
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (370)
++..+|+|+|||+|..+..+. +++ |..+++.-|+| . .+ .. .... .
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~--------~~~-------~~~~~~~~D~~------------~---~~-~~-a~~~---~ 252 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELII--------SKY-------PLIKGINFDLP------------Q---VI-EN-APPL---S 252 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHH--------HHC-------TTCEEEEEECH------------H---HH-TT-CCCC---T
T ss_pred CCCCEEEEeCCCCcHHHHHHH--------HHC-------CCCeEEEeChH------------H---HH-Hh-hhhc---C
Confidence 356899999999999887666 432 45788888875 1 11 00 1111 1
Q ss_pred ceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
+ +..+.|+|++ -+|. .|+++++.+||+++. .+...+|+.-++-|
T Consensus 253 ~--v~~~~~d~~~-~~~~--~D~v~~~~~lh~~~d-------------------------------~~~~~~l~~~~~~L 296 (372)
T 1fp1_D 253 G--IEHVGGDMFA-SVPQ--GDAMILKAVCHNWSD-------------------------------EKCIEFLSNCHKAL 296 (372)
T ss_dssp T--EEEEECCTTT-CCCC--EEEEEEESSGGGSCH-------------------------------HHHHHHHHHHHHHE
T ss_pred C--CEEEeCCccc-CCCC--CCEEEEecccccCCH-------------------------------HHHHHHHHHHHHhc
Confidence 2 2234568877 3565 899999999997433 12234788888999
Q ss_pred ccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEE
Q 017514 209 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEV 288 (370)
Q Consensus 209 ~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~ 288 (370)
+|||++++.-...++...... ...+..+.+.+ -|+..| -..++.+|+++.+++.| |++.+...
T Consensus 297 ~pgG~l~i~e~~~~~~~~~~~--~~~~~~~~d~~-~~~~~~-------------~~~~t~~e~~~ll~~aG-f~~~~~~~ 359 (372)
T 1fp1_D 297 SPNGKVIIVEFILPEEPNTSE--ESKLVSTLDNL-MFITVG-------------GRERTEKQYEKLSKLSG-FSKFQVAC 359 (372)
T ss_dssp EEEEEEEEEEEEECSSCCSSH--HHHHHHHHHHH-HHHHHS-------------CCCEEHHHHHHHHHHTT-CSEEEEEE
T ss_pred CCCCEEEEEEeccCCCCccch--HHHHHHHhhHH-HHhccC-------------CccCCHHHHHHHHHHCC-CceEEEEE
Confidence 999999998655443321110 00001111111 111111 12359999999999999 88766654
Q ss_pred E
Q 017514 289 S 289 (370)
Q Consensus 289 ~ 289 (370)
.
T Consensus 360 ~ 360 (372)
T 1fp1_D 360 R 360 (372)
T ss_dssp E
T ss_pred c
Confidence 3
|
| >3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A | Back alignment and structure |
|---|
Probab=98.38 E-value=3.2e-06 Score=75.62 Aligned_cols=153 Identities=12% Similarity=0.040 Sum_probs=86.8
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCC-CCC---C
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGS-ASG---A 126 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~-~~~---~ 126 (370)
..+|+|+|||+|..+..+. ++ + +..+|+.-|+. +.......+.... ... .
T Consensus 30 ~~~vLDiGcG~G~~~~~l~--------~~----~---~~~~v~gvD~s-----------~~~~~~a~~~~~~~~~~~~~~ 83 (217)
T 3jwh_A 30 ARRVIDLGCGQGNLLKILL--------KD----S---FFEQITGVDVS-----------YRSLEIAQERLDRLRLPRNQW 83 (217)
T ss_dssp CCEEEEETCTTCHHHHHHH--------HC----T---TCSEEEEEESC-----------HHHHHHHHHHHTTCCCCHHHH
T ss_pred CCEEEEeCCCCCHHHHHHH--------hh----C---CCCEEEEEECC-----------HHHHHHHHHHHHHhcCCcccC
Confidence 4699999999999887665 22 1 34688888885 3332222222111 000 0
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
.+-.|..+ ++...-++.+++|+++++.++||+.. .++..+|+.-.+
T Consensus 84 ~~v~~~~~---d~~~~~~~~~~fD~v~~~~~l~~~~~-------------------------------~~~~~~l~~~~~ 129 (217)
T 3jwh_A 84 ERLQLIQG---ALTYQDKRFHGYDAATVIEVIEHLDL-------------------------------SRLGAFERVLFE 129 (217)
T ss_dssp TTEEEEEC---CTTSCCGGGCSCSEEEEESCGGGCCH-------------------------------HHHHHHHHHHHT
T ss_pred cceEEEeC---CcccccccCCCcCEEeeHHHHHcCCH-------------------------------HHHHHHHHHHHH
Confidence 01234333 55333346689999999999999732 234557888889
Q ss_pred hhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHH----HHHHhcCceE
Q 017514 207 ELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIK----SEVIKEGSFT 282 (370)
Q Consensus 207 EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~----~~ie~~GsF~ 282 (370)
-|+|||+++++.... +.. .|..+.. + .....-..+..+.+|++ .++++.| |+
T Consensus 130 ~LkpgG~li~~~~~~-------------~~~---~~~~~~~-~------~~~~~~~~~~~~~~~l~~~~~~~~~~~G-f~ 185 (217)
T 3jwh_A 130 FAQPKIVIVTTPNIE-------------YNV---KFANLPA-G------KLRHKDHRFEWTRSQFQNWANKITERFA-YN 185 (217)
T ss_dssp TTCCSEEEEEEEBHH-------------HHH---HTC------------------CCSCBCHHHHHHHHHHHHHHSS-EE
T ss_pred HcCCCEEEEEccCcc-------------cch---hhccccc-c------cccccccccccCHHHHHHHHHHHHHHcC-ce
Confidence 999999666554310 111 1111100 0 00112233557999999 7888888 87
Q ss_pred EEEEE
Q 017514 283 IDHLE 287 (370)
Q Consensus 283 i~~le 287 (370)
++...
T Consensus 186 v~~~~ 190 (217)
T 3jwh_A 186 VQFQP 190 (217)
T ss_dssp EEECC
T ss_pred EEEEe
Confidence 75443
|
| >1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=1.1e-05 Score=78.00 Aligned_cols=158 Identities=15% Similarity=0.168 Sum_probs=94.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
+..+|+|+|||+|..+..+. +++ |..+++.-|+| +.- ... ..... ..+..- +-
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~--------~~~-------~~~~~~~~D~~--~~~---~~a---~~~~~-~~~~~~---~v 235 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIA--------RRA-------PHVSATVLEMA--GTV---DTA---RSYLK-DEGLSD---RV 235 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHH--------HHC-------TTCEEEEEECT--THH---HHH---HHHHH-HTTCTT---TE
T ss_pred cCcEEEEeCCcCcHHHHHHH--------HhC-------CCCEEEEecCH--HHH---HHH---HHHHH-hcCCCC---ce
Confidence 45799999999999887665 331 45788888984 111 111 11111 112110 22
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
.|. .+++.+ -+|.+ .|+++++..+|.+ |+ .+...+|+.-.+-|+
T Consensus 236 ~~~---~~d~~~-~~~~~-~D~v~~~~vl~~~---~~----------------------------~~~~~~l~~~~~~L~ 279 (360)
T 1tw3_A 236 DVV---EGDFFE-PLPRK-ADAIILSFVLLNW---PD----------------------------HDAVRILTRCAEALE 279 (360)
T ss_dssp EEE---ECCTTS-CCSSC-EEEEEEESCGGGS---CH----------------------------HHHHHHHHHHHHTEE
T ss_pred EEE---eCCCCC-CCCCC-ccEEEEcccccCC---CH----------------------------HHHHHHHHHHHHhcC
Confidence 343 458765 34554 9999999999863 31 123447777788999
Q ss_pred cCceEEEEeec-cCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEE
Q 017514 210 AEGRMVLTFLG-RKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEV 288 (370)
Q Consensus 210 ~GG~lvl~~~g-~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~ 288 (370)
|||++++.-.. .++... . .+..+.+.+ -|+..| ...++.+|+++.+++.| |++.++..
T Consensus 280 pgG~l~i~e~~~~~~~~~--~----~~~~~~~~~-~~~~~~-------------~~~~t~~e~~~ll~~aG-f~~~~~~~ 338 (360)
T 1tw3_A 280 PGGRILIHERDDLHENSF--N----EQFTELDLR-MLVFLG-------------GALRTREKWDGLAASAG-LVVEEVRQ 338 (360)
T ss_dssp EEEEEEEEECCBCGGGCC--S----HHHHHHHHH-HHHHHS-------------CCCCBHHHHHHHHHHTT-EEEEEEEE
T ss_pred CCcEEEEEEEeccCCCCC--c----chhhhccHH-HhhhcC-------------CcCCCHHHHHHHHHHCC-CeEEEEEe
Confidence 99999988665 332211 0 111111111 111111 14579999999999999 99888776
Q ss_pred Eee
Q 017514 289 SEV 291 (370)
Q Consensus 289 ~~~ 291 (370)
...
T Consensus 339 ~~~ 341 (360)
T 1tw3_A 339 LPS 341 (360)
T ss_dssp EEC
T ss_pred CCC
Confidence 543
|
| >4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=5.3e-07 Score=89.32 Aligned_cols=146 Identities=10% Similarity=0.129 Sum_probs=90.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
...+|+|+|||+|..+..+. ++ ..+|+.-|+. +.......+ .+... ...
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~--------~~---------g~~v~gvD~s-----------~~~~~~a~~-~~~~~--~~~ 155 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQ--------EA---------GVRHLGFEPS-----------SGVAAKARE-KGIRV--RTD 155 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHH--------HT---------TCEEEEECCC-----------HHHHHHHHT-TTCCE--ECS
T ss_pred CCCEEEEecCCCCHHHHHHH--------Hc---------CCcEEEECCC-----------HHHHHHHHH-cCCCc--cee
Confidence 45799999999999877555 22 1478888875 322221111 11110 000
Q ss_pred eEEeecCCCccccc-CCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 130 CFFTGVPGSFYGRL-FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 130 ~f~~~vpgSFy~~l-~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
.|..+ .. ..+ ++++++|+++|+.+|||+.+ ...||+.-++-|
T Consensus 156 ~~~~~---~~-~~l~~~~~~fD~I~~~~vl~h~~d---------------------------------~~~~l~~~~r~L 198 (416)
T 4e2x_A 156 FFEKA---TA-DDVRRTEGPANVIYAANTLCHIPY---------------------------------VQSVLEGVDALL 198 (416)
T ss_dssp CCSHH---HH-HHHHHHHCCEEEEEEESCGGGCTT---------------------------------HHHHHHHHHHHE
T ss_pred eechh---hH-hhcccCCCCEEEEEECChHHhcCC---------------------------------HHHHHHHHHHHc
Confidence 11111 11 111 46799999999999999742 123788888999
Q ss_pred ccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccC-CcCcccCCHHHHHHHHHhcCceEEEEEE
Q 017514 209 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCF-NIPQYTPSPAEIKSEVIKEGSFTIDHLE 287 (370)
Q Consensus 209 ~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f-~~P~y~~s~eE~~~~ie~~GsF~i~~le 287 (370)
+|||+|++...... ..+ . ...++.+ .-...+++.++++..+++.| |++..++
T Consensus 199 kpgG~l~i~~~~~~-------------~~~----~---------~~~~~~~~~~~~~~~s~~~l~~ll~~aG-f~~~~~~ 251 (416)
T 4e2x_A 199 APDGVFVFEDPYLG-------------DIV----A---------KTSFDQIFDEHFFLFSATSVQGMAQRCG-FELVDVQ 251 (416)
T ss_dssp EEEEEEEEEEECHH-------------HHH----H---------HTCGGGCSTTCCEECCHHHHHHHHHHTT-EEEEEEE
T ss_pred CCCeEEEEEeCChH-------------Hhh----h---------hcchhhhhhhhhhcCCHHHHHHHHHHcC-CEEEEEE
Confidence 99999999865321 111 0 0112222 23456789999999999999 9998888
Q ss_pred EEe
Q 017514 288 VSE 290 (370)
Q Consensus 288 ~~~ 290 (370)
.+.
T Consensus 252 ~~~ 254 (416)
T 4e2x_A 252 RLP 254 (416)
T ss_dssp EEC
T ss_pred Ecc
Confidence 763
|
| >2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.36 E-value=4.6e-06 Score=74.06 Aligned_cols=135 Identities=14% Similarity=0.127 Sum_probs=82.9
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcc-eEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEF-QVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i-~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (370)
...+|+|+|||+|..+..+ . . +++.-|+. +.......+.. . +
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-------------------~-~~~v~~vD~s-----------~~~~~~a~~~~-~-----~ 78 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-------------------P-YPQKVGVEPS-----------EAMLAVGRRRA-P-----E 78 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-------------------C-CSEEEEECCC-----------HHHHHHHHHHC-T-----T
T ss_pred CCCeEEEECCCCCHhHHhC-------------------C-CCeEEEEeCC-----------HHHHHHHHHhC-C-----C
Confidence 4579999999999876533 1 3 67777875 33322222221 1 2
Q ss_pred ceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
-.|..+ ++..--+|++++|+++++.++||+.. | ..+|+.-.+-|
T Consensus 79 ~~~~~~---d~~~~~~~~~~fD~v~~~~~l~~~~~-~--------------------------------~~~l~~~~~~L 122 (211)
T 2gs9_A 79 ATWVRA---WGEALPFPGESFDVVLLFTTLEFVED-V--------------------------------ERVLLEARRVL 122 (211)
T ss_dssp SEEECC---CTTSCCSCSSCEEEEEEESCTTTCSC-H--------------------------------HHHHHHHHHHE
T ss_pred cEEEEc---ccccCCCCCCcEEEEEEcChhhhcCC-H--------------------------------HHHHHHHHHHc
Confidence 234333 44332357889999999999999643 1 12666778889
Q ss_pred ccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcC
Q 017514 209 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEG 279 (370)
Q Consensus 209 ~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~G 279 (370)
+|||++++..+.... .|..+.. .+...| ....-...+.|.+|+++.++ |
T Consensus 123 ~pgG~l~i~~~~~~~----------~~~~~~~---~~~~~~-------~~~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 123 RPGGALVVGVLEALS----------PWAALYR---RLGEKG-------VLPWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp EEEEEEEEEEECTTS----------HHHHHHH---HHHHTT-------CTTGGGCCCCCHHHHHHHHC--S
T ss_pred CCCCEEEEEecCCcC----------cHHHHHH---HHhhcc-------CccccccccCCHHHHHHHhc--C
Confidence 999999999876442 1222211 111122 11111245679999999999 7
|
| >3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A | Back alignment and structure |
|---|
Probab=98.35 E-value=7.7e-06 Score=76.68 Aligned_cols=107 Identities=13% Similarity=0.084 Sum_probs=69.1
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhC-CCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLG-SASGAA 127 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~-~~~~~~ 127 (370)
.+..+|+|+|||+|..+..+. +.+ ++..+|+..|+. +.......+... ...
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~--------~~~------~~~~~v~gvD~s-----------~~~~~~a~~~~~~~~~--- 72 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLM--------PLL------PEGSKYTGIDSG-----------ETLLAEARELFRLLPY--- 72 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHT--------TTS------CTTCEEEEEESC-----------HHHHHHHHHHHHSSSS---
T ss_pred CCCCeEEEecCCCCHHHHHHH--------HhC------CCCCEEEEEECC-----------HHHHHHHHHHHHhcCC---
Confidence 356899999999998877655 221 113788999985 333222222211 110
Q ss_pred CceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017514 128 GQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~E 207 (370)
+-.|..+ ++.+ +.+++++|++++..++|++... ..+|+.-.+-
T Consensus 73 ~v~~~~~---d~~~-~~~~~~fD~v~~~~~l~~~~~~---------------------------------~~~l~~~~~~ 115 (284)
T 3gu3_A 73 DSEFLEG---DATE-IELNDKYDIAICHAFLLHMTTP---------------------------------ETMLQKMIHS 115 (284)
T ss_dssp EEEEEES---CTTT-CCCSSCEEEEEEESCGGGCSSH---------------------------------HHHHHHHHHT
T ss_pred ceEEEEc---chhh-cCcCCCeeEEEECChhhcCCCH---------------------------------HHHHHHHHHH
Confidence 1234333 6643 4446799999999999996431 1356666789
Q ss_pred hccCceEEEEeec
Q 017514 208 LVAEGRMVLTFLG 220 (370)
Q Consensus 208 L~~GG~lvl~~~g 220 (370)
|+|||++++..+.
T Consensus 116 LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 116 VKKGGKIICFEPH 128 (284)
T ss_dssp EEEEEEEEEEECC
T ss_pred cCCCCEEEEEecc
Confidence 9999999988765
|
| >3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=98.32 E-value=8.3e-06 Score=69.87 Aligned_cols=132 Identities=13% Similarity=0.158 Sum_probs=86.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
...+|+|+|||+|..+..+. +. - .+++.-|+. +.......+. .. +-
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~--------~~--------~-~~v~~vD~s-----------~~~~~~a~~~-~~-----~v 62 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLL--------EF--------A-TKLYCIDIN-----------VIALKEVKEK-FD-----SV 62 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHH--------TT--------E-EEEEEECSC-----------HHHHHHHHHH-CT-----TS
T ss_pred CCCeEEEECCCCCHHHHHHH--------hh--------c-CeEEEEeCC-----------HHHHHHHHHh-CC-----Cc
Confidence 45799999999999988666 22 1 277788874 3322222222 11 22
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
.|..+ + .-+|++++|+++++.++||+.. | ..+|+.-.+-|+
T Consensus 63 ~~~~~---d---~~~~~~~~D~v~~~~~l~~~~~-~--------------------------------~~~l~~~~~~L~ 103 (170)
T 3i9f_A 63 ITLSD---P---KEIPDNSVDFILFANSFHDMDD-K--------------------------------QHVISEVKRILK 103 (170)
T ss_dssp EEESS---G---GGSCTTCEEEEEEESCSTTCSC-H--------------------------------HHHHHHHHHHEE
T ss_pred EEEeC---C---CCCCCCceEEEEEccchhcccC-H--------------------------------HHHHHHHHHhcC
Confidence 44433 3 3357889999999999999632 1 126677778999
Q ss_pred cCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEEE
Q 017514 210 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVS 289 (370)
Q Consensus 210 ~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~ 289 (370)
|||++++......+..... ......+.+|++..++ | |++.+...+
T Consensus 104 pgG~l~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~l~--G-f~~~~~~~~ 148 (170)
T 3i9f_A 104 DDGRVIIIDWRKENTGIGP--------------------------------PLSIRMDEKDYMGWFS--N-FVVEKRFNP 148 (170)
T ss_dssp EEEEEEEEEECSSCCSSSS--------------------------------CGGGCCCHHHHHHHTT--T-EEEEEEECS
T ss_pred CCCEEEEEEcCccccccCc--------------------------------hHhhhcCHHHHHHHHh--C-cEEEEccCC
Confidence 9999999977655431100 0112368999999999 7 988766544
|
| >3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A* | Back alignment and structure |
|---|
Probab=98.31 E-value=3.9e-06 Score=74.79 Aligned_cols=107 Identities=12% Similarity=0.055 Sum_probs=71.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (370)
....+|+|+|||+|..+..+. +. -.+|+.-|+- +.......+...... +
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~~vD~s-----------~~~~~~a~~~~~~~~---~ 98 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLA--------PH---------CKRLTVIDVM-----------PRAIGRACQRTKRWS---H 98 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHG--------GG---------EEEEEEEESC-----------HHHHHHHHHHTTTCS---S
T ss_pred CCCCcEEEEcCCCCHHHHHHH--------Hc---------CCEEEEEECC-----------HHHHHHHHHhcccCC---C
Confidence 356899999999999887654 22 1477788875 333222222222110 2
Q ss_pred ceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
-.|..+ ++ ..+.|++++|+++++.++||+.. | .++..+|+.-++-|
T Consensus 99 ~~~~~~---d~-~~~~~~~~fD~v~~~~~l~~~~~-~-----------------------------~~~~~~l~~~~~~L 144 (216)
T 3ofk_A 99 ISWAAT---DI-LQFSTAELFDLIVVAEVLYYLED-M-----------------------------TQMRTAIDNMVKML 144 (216)
T ss_dssp EEEEEC---CT-TTCCCSCCEEEEEEESCGGGSSS-H-----------------------------HHHHHHHHHHHHTE
T ss_pred eEEEEc---ch-hhCCCCCCccEEEEccHHHhCCC-H-----------------------------HHHHHHHHHHHHHc
Confidence 234444 55 34448899999999999999654 1 23445788888999
Q ss_pred ccCceEEEEeec
Q 017514 209 VAEGRMVLTFLG 220 (370)
Q Consensus 209 ~~GG~lvl~~~g 220 (370)
+|||.+++....
T Consensus 145 ~pgG~l~~~~~~ 156 (216)
T 3ofk_A 145 APGGHLVFGSAR 156 (216)
T ss_dssp EEEEEEEEEEEC
T ss_pred CCCCEEEEEecC
Confidence 999999998763
|
| >3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=98.31 E-value=3.7e-06 Score=76.55 Aligned_cols=157 Identities=15% Similarity=0.062 Sum_probs=89.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
...+|+|+|||+|.++..+. +. + + +|+.-|.. +.......+..... +-
T Consensus 56 ~~~~vLD~GcG~G~~~~~la--------~~----~---~--~v~gvD~s-----------~~~~~~a~~~~~~~----~~ 103 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFLS--------QF----F---P--RVIGLDVS-----------KSALEIAAKENTAA----NI 103 (245)
T ss_dssp TTSCEEEETCTTSHHHHHHH--------HH----S---S--CEEEEESC-----------HHHHHHHHHHSCCT----TE
T ss_pred CCCeEEEEcCCCCHHHHHHH--------Hh----C---C--CEEEEECC-----------HHHHHHHHHhCccc----Cc
Confidence 45789999999999988776 32 1 2 56777764 33222222222211 22
Q ss_pred eEEeecCCCcccccCC-----CCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017514 130 CFFTGVPGSFYGRLFP-----RNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCR 204 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p-----~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~R 204 (370)
.|+.+ ++..--++ ..++|++++..++||+.. .|...+|+.-
T Consensus 104 ~~~~~---d~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~-------------------------------~~~~~~l~~~ 149 (245)
T 3ggd_A 104 SYRLL---DGLVPEQAAQIHSEIGDANIYMRTGFHHIPV-------------------------------EKRELLGQSL 149 (245)
T ss_dssp EEEEC---CTTCHHHHHHHHHHHCSCEEEEESSSTTSCG-------------------------------GGHHHHHHHH
T ss_pred eEEEC---cccccccccccccccCccEEEEcchhhcCCH-------------------------------HHHHHHHHHH
Confidence 44444 44331111 134899999999999632 2334477777
Q ss_pred HHhhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcch---hhhccCCcCcccCCHHHHHHHHHhcCce
Q 017514 205 SEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEE---EKVNCFNIPQYTPSPAEIKSEVIKEGSF 281 (370)
Q Consensus 205 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~---e~~d~f~~P~y~~s~eE~~~~ie~~GsF 281 (370)
.+-|+|||++++.-++..+. ..+..+.... .| ... ..+..-..| ...+.+|+.+.+ .| |
T Consensus 150 ~~~LkpgG~l~i~~~~~~~~--------~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~--aG-f 211 (245)
T 3ggd_A 150 RILLGKQGAMYLIELGTGCI--------DFFNSLLEKY-----GQ-LPYELLLVMEHGIRP-GIFTAEDIELYF--PD-F 211 (245)
T ss_dssp HHHHTTTCEEEEEEECTTHH--------HHHHHHHHHH-----SS-CCHHHHHHHTTTCCC-CCCCHHHHHHHC--TT-E
T ss_pred HHHcCCCCEEEEEeCCcccc--------HHHHHHHhCC-----CC-CchhhhhccccCCCC-CccCHHHHHHHh--CC-C
Confidence 88999999998887764421 1111111110 01 110 011122234 346899999999 78 9
Q ss_pred EEEEEEEEe
Q 017514 282 TIDHLEVSE 290 (370)
Q Consensus 282 ~i~~le~~~ 290 (370)
++.......
T Consensus 212 ~~~~~~~~~ 220 (245)
T 3ggd_A 212 EILSQGEGL 220 (245)
T ss_dssp EEEEEECCB
T ss_pred EEEeccccc
Confidence 887666543
|
| >2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A* | Back alignment and structure |
|---|
Probab=98.30 E-value=5.3e-06 Score=72.46 Aligned_cols=138 Identities=13% Similarity=0.071 Sum_probs=85.1
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~~ 127 (370)
..+|+|+|||+|..+..+. +. ..+++..|.. +.......+ ..+..
T Consensus 33 ~~~vLdiG~G~G~~~~~l~--------~~---------~~~v~~vD~s-----------~~~~~~a~~~~~~~~~~---- 80 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLA--------AN---------GYDVDAWDKN-----------AMSIANVERIKSIENLD---- 80 (199)
T ss_dssp SCEEEEETCTTSHHHHHHH--------HT---------TCEEEEEESC-----------HHHHHHHHHHHHHHTCT----
T ss_pred CCeEEEEcCCCCHHHHHHH--------HC---------CCeEEEEECC-----------HHHHHHHHHHHHhCCCC----
Confidence 4599999999999887665 21 1577777874 222111111 11210
Q ss_pred CceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017514 128 GQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~E 207 (370)
.-.|.. +++..--+ ++++|+++++.++||+.. .|+..+|+.-.+-
T Consensus 81 ~~~~~~---~d~~~~~~-~~~~D~v~~~~~l~~~~~-------------------------------~~~~~~l~~~~~~ 125 (199)
T 2xvm_A 81 NLHTRV---VDLNNLTF-DRQYDFILSTVVLMFLEA-------------------------------KTIPGLIANMQRC 125 (199)
T ss_dssp TEEEEE---CCGGGCCC-CCCEEEEEEESCGGGSCG-------------------------------GGHHHHHHHHHHT
T ss_pred CcEEEE---cchhhCCC-CCCceEEEEcchhhhCCH-------------------------------HHHHHHHHHHHHh
Confidence 123333 35543223 789999999999999642 1334477777899
Q ss_pred hccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEE
Q 017514 208 LVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLE 287 (370)
Q Consensus 208 L~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le 287 (370)
|+|||++++......+..+. + ....+..+.+|+++.++. |++.+.+
T Consensus 126 L~~gG~l~~~~~~~~~~~~~---------------------~----------~~~~~~~~~~~l~~~~~~---f~~~~~~ 171 (199)
T 2xvm_A 126 TKPGGYNLIVAAMDTADYPC---------------------T----------VGFPFAFKEGELRRYYEG---WERVKYN 171 (199)
T ss_dssp EEEEEEEEEEEEBCCSSSCC---------------------C----------SCCSCCBCTTHHHHHTTT---SEEEEEE
T ss_pred cCCCeEEEEEEeeccCCcCC---------------------C----------CCCCCccCHHHHHHHhcC---CeEEEec
Confidence 99999988765543322110 0 112245689999999975 8887766
Q ss_pred EE
Q 017514 288 VS 289 (370)
Q Consensus 288 ~~ 289 (370)
..
T Consensus 172 ~~ 173 (199)
T 2xvm_A 172 ED 173 (199)
T ss_dssp CC
T ss_pred cc
Confidence 43
|
| >3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.27 E-value=2.2e-06 Score=81.12 Aligned_cols=48 Identities=10% Similarity=0.080 Sum_probs=36.9
Q ss_pred CCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEe
Q 017514 144 FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTF 218 (370)
Q Consensus 144 ~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~ 218 (370)
++++++|++++...+||+.- ..-..++..+|+.-++-|+|||+|++..
T Consensus 173 ~~~~~fD~I~~~~vl~~ihl---------------------------~~~~~~~~~~l~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 173 AQTPEYDVVLCLSLTKWVHL---------------------------NWGDEGLKRMFRRIYRHLRPGGILVLEP 220 (292)
T ss_dssp TCCCCEEEEEEESCHHHHHH---------------------------HHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccCCCcCEEEEChHHHHhhh---------------------------cCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 46889999999999999531 0011456678888899999999999863
|
| >3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=98.26 E-value=7.9e-06 Score=76.33 Aligned_cols=138 Identities=14% Similarity=0.129 Sum_probs=87.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhC-CCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLG-SASGAAG 128 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~-~~~~~~~ 128 (370)
...+|+|+|||+|.++..+. +. ..+|+..|.- +.......+... ... +
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~--------~~---------g~~v~~vD~s-----------~~~~~~a~~~~~~~~~---~ 168 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLS--------LL---------GYDVTSWDHN-----------ENSIAFLNETKEKENL---N 168 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHH--------HT---------TCEEEEEESC-----------HHHHHHHHHHHHHTTC---C
T ss_pred CCCcEEEECCCCCHHHHHHH--------HC---------CCeEEEEECC-----------HHHHHHHHHHHHHcCC---c
Confidence 35799999999999988765 22 2578888874 222221111110 110 1
Q ss_pred ceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
-.|.. +++.. +.+++++|+++++.++||++. .++..+|+.-.+-|
T Consensus 169 ~~~~~---~d~~~-~~~~~~fD~i~~~~~~~~~~~-------------------------------~~~~~~l~~~~~~L 213 (286)
T 3m70_A 169 ISTAL---YDINA-ANIQENYDFIVSTVVFMFLNR-------------------------------ERVPSIIKNMKEHT 213 (286)
T ss_dssp EEEEE---CCGGG-CCCCSCEEEEEECSSGGGSCG-------------------------------GGHHHHHHHHHHTE
T ss_pred eEEEE---ecccc-ccccCCccEEEEccchhhCCH-------------------------------HHHHHHHHHHHHhc
Confidence 23333 36643 334889999999999999743 13344788888999
Q ss_pred ccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEE
Q 017514 209 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLE 287 (370)
Q Consensus 209 ~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le 287 (370)
+|||++++......+..+. -..+.+..+.+|++..++. |++...+
T Consensus 214 kpgG~l~i~~~~~~~~~~~-------------------------------~~~~~~~~~~~~l~~~~~~---~~~~~~~ 258 (286)
T 3m70_A 214 NVGGYNLIVAAMSTDDVPC-------------------------------PLPFSFTFAENELKEYYKD---WEFLEYN 258 (286)
T ss_dssp EEEEEEEEEEEBCCSSSCC-------------------------------SSCCSCCBCTTHHHHHTTT---SEEEEEE
T ss_pred CCCcEEEEEEecCCCCCCC-------------------------------CCCccccCCHHHHHHHhcC---CEEEEEE
Confidence 9999988876544332110 0123467788999998864 8876665
|
| >2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A | Back alignment and structure |
|---|
Probab=98.23 E-value=1.3e-05 Score=69.39 Aligned_cols=71 Identities=11% Similarity=0.059 Sum_probs=52.9
Q ss_pred CCCCceeEEEeccccccc-cCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeccC
Q 017514 144 FPRNSVHLFHSSYSLQWL-SQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRK 222 (370)
Q Consensus 144 ~p~~sv~~~~S~~alhWl-s~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~ 222 (370)
+|++++|+++|++++||+ .. + ..+|+.-++-|+|||++++.-....
T Consensus 59 ~~~~~fD~V~~~~~l~~~~~~-~--------------------------------~~~l~~~~r~LkpgG~l~~~~~~~~ 105 (176)
T 2ld4_A 59 HKESSFDIILSGLVPGSTTLH-S--------------------------------AEILAEIARILRPGGCLFLKEPVET 105 (176)
T ss_dssp CCSSCEEEEEECCSTTCCCCC-C--------------------------------HHHHHHHHHHEEEEEEEEEEEEEES
T ss_pred CCCCCEeEEEECChhhhcccC-H--------------------------------HHHHHHHHHHCCCCEEEEEEccccc
Confidence 378899999999999997 22 1 1267777899999999999533211
Q ss_pred CCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEE
Q 017514 223 SQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTID 284 (370)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~ 284 (370)
.. + .+.|.++.+|+...+++.| | |+
T Consensus 106 ~~------------------------~-----------~~~~~~~~~~~~~~l~~aG-f-i~ 130 (176)
T 2ld4_A 106 AV------------------------D-----------NNSKVKTASKLCSALTLSG-L-VE 130 (176)
T ss_dssp SS------------------------C-----------SSSSSCCHHHHHHHHHHTT-C-EE
T ss_pred cc------------------------c-----------cccccCCHHHHHHHHHHCC-C-cE
Confidence 00 0 0667789999999999999 8 66
|
| >2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41 | Back alignment and structure |
|---|
Probab=98.21 E-value=9.3e-06 Score=74.94 Aligned_cols=155 Identities=15% Similarity=0.218 Sum_probs=90.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
...+|+|+|||+|..+..+. +. ..+|+..|+. +...+...+... .
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~gvD~s-----------~~~l~~a~~~~~------~- 98 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQ--------ER---------GFEVVLVDPS-----------KEMLEVAREKGV------K- 98 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHH--------TT---------TCEEEEEESC-----------HHHHHHHHHHTC------S-
T ss_pred CCCeEEEeCCCcCHHHHHHH--------Hc---------CCeEEEEeCC-----------HHHHHHHHhhcC------C-
Confidence 45799999999999887655 21 1577888875 333222222211 1
Q ss_pred eEEeecCCCcccccCCCCceeEEEecc-ccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSY-SLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~-alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
.|..+ ++..--+|++++|++++.. .+||... | ..+|+.-.+-|
T Consensus 99 ~~~~~---d~~~~~~~~~~fD~v~~~~~~~~~~~~-~--------------------------------~~~l~~~~~~L 142 (260)
T 2avn_A 99 NVVEA---KAEDLPFPSGAFEAVLALGDVLSYVEN-K--------------------------------DKAFSEIRRVL 142 (260)
T ss_dssp CEEEC---CTTSCCSCTTCEEEEEECSSHHHHCSC-H--------------------------------HHHHHHHHHHE
T ss_pred CEEEC---cHHHCCCCCCCEEEEEEcchhhhcccc-H--------------------------------HHHHHHHHHHc
Confidence 24444 5533336789999999976 5677433 1 22677778899
Q ss_pred ccCceEEEEeeccCCCCCCCchhhhHHHHHH----HHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEE
Q 017514 209 VAEGRMVLTFLGRKSQDPSSKECCYIWELLA----TALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTID 284 (370)
Q Consensus 209 ~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~----~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~ 284 (370)
+|||++++..++.... ..+.+. ..+......|...... ..+.++.++.+++|+++. .| |++.
T Consensus 143 kpgG~l~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l---aG-f~~~ 208 (260)
T 2avn_A 143 VPDGLLIATVDNFYTF---------LQQMIEKDAWDQITRFLKTQTTSVGT-TLFSFNSYAFKPEDLDSL---EG-FETV 208 (260)
T ss_dssp EEEEEEEEEEEBHHHH---------HHHHHHTTCHHHHHHHHHHCEEEEEC-SSEEEEEECBCGGGGSSC---TT-EEEE
T ss_pred CCCeEEEEEeCChHHH---------HHHhhcchhHHHHHHHHhccccccCC-CceeEEEeccCHHHHHHh---cC-ceEE
Confidence 9999999998764310 001000 1112223334322110 011122347799999987 78 9887
Q ss_pred EEEEE
Q 017514 285 HLEVS 289 (370)
Q Consensus 285 ~le~~ 289 (370)
+....
T Consensus 209 ~~~~~ 213 (260)
T 2avn_A 209 DIRGI 213 (260)
T ss_dssp EEEEE
T ss_pred EEECC
Confidence 77655
|
| >2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.21 E-value=3.3e-06 Score=75.38 Aligned_cols=112 Identities=18% Similarity=0.158 Sum_probs=76.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
...+|+|+|||+|..+..+. .+++.-|+... . .
T Consensus 67 ~~~~vLDiG~G~G~~~~~l~--------------------~~v~~~D~s~~----------------------~-----~ 99 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSIR--------------------NPVHCFDLASL----------------------D-----P 99 (215)
T ss_dssp TTSCEEEETCTTCHHHHHCC--------------------SCEEEEESSCS----------------------S-----T
T ss_pred CCCeEEEECCcCCHHHHHhh--------------------ccEEEEeCCCC----------------------C-----c
Confidence 45799999999998765331 35566666433 0 0
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
.|..+ ++..--+|++++|+++++.++|| +. ...+|+.-++-|+
T Consensus 100 ~~~~~---d~~~~~~~~~~fD~v~~~~~l~~----~~------------------------------~~~~l~~~~~~L~ 142 (215)
T 2zfu_A 100 RVTVC---DMAQVPLEDESVDVAVFCLSLMG----TN------------------------------IRDFLEEANRVLK 142 (215)
T ss_dssp TEEES---CTTSCSCCTTCEEEEEEESCCCS----SC------------------------------HHHHHHHHHHHEE
T ss_pred eEEEe---ccccCCCCCCCEeEEEEehhccc----cC------------------------------HHHHHHHHHHhCC
Confidence 12222 44332357889999999999996 21 1225666678899
Q ss_pred cCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEE
Q 017514 210 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEV 288 (370)
Q Consensus 210 ~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~ 288 (370)
|||++++...... +++.+++...+++.| |++.....
T Consensus 143 ~gG~l~i~~~~~~------------------------------------------~~~~~~~~~~l~~~G-f~~~~~~~ 178 (215)
T 2zfu_A 143 PGGLLKVAEVSSR------------------------------------------FEDVRTFLRAVTKLG-FKIVSKDL 178 (215)
T ss_dssp EEEEEEEEECGGG------------------------------------------CSCHHHHHHHHHHTT-EEEEEEEC
T ss_pred CCeEEEEEEcCCC------------------------------------------CCCHHHHHHHHHHCC-CEEEEEec
Confidence 9999999854210 128999999999999 98877553
|
| >1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A* | Back alignment and structure |
|---|
Probab=98.19 E-value=2.2e-05 Score=76.18 Aligned_cols=149 Identities=15% Similarity=0.223 Sum_probs=91.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
+..+|+|+|||+|..+..+. +++ |..+++.-|+| ..... .... .+
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~--------~~~-------p~~~~~~~D~~-----~~~~~------------a~~~---~~ 237 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIH--------EIF-------PHLKCTVFDQP-----QVVGN------------LTGN---EN 237 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHH--------HHC-------TTSEEEEEECH-----HHHSS------------CCCC---SS
T ss_pred CCCEEEEECCCcCHHHHHHH--------HHC-------CCCeEEEeccH-----HHHhh------------cccC---CC
Confidence 34799999999999888766 432 45777777875 01111 1111 12
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
+.-+.++|++ -+| +.|++++++.||+++. .+...+|+.-.+-|+
T Consensus 238 --v~~~~~d~~~-~~~--~~D~v~~~~vlh~~~d-------------------------------~~~~~~l~~~~~~L~ 281 (358)
T 1zg3_A 238 --LNFVGGDMFK-SIP--SADAVLLKWVLHDWND-------------------------------EQSLKILKNSKEAIS 281 (358)
T ss_dssp --EEEEECCTTT-CCC--CCSEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHHTG
T ss_pred --cEEEeCccCC-CCC--CceEEEEcccccCCCH-------------------------------HHHHHHHHHHHHhCC
Confidence 3335568877 345 4999999999997433 122347888889999
Q ss_pred c---CceEEEEeeccCCCCCCC--chhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEE
Q 017514 210 A---EGRMVLTFLGRKSQDPSS--KECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTID 284 (370)
Q Consensus 210 ~---GG~lvl~~~g~~~~~~~~--~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~ 284 (370)
| ||++++.-...++..... ......+++. -|+..| -..++.+|+++.+++.| |++.
T Consensus 282 p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~-----~~~~~~-------------g~~~t~~e~~~ll~~aG-f~~~ 342 (358)
T 1zg3_A 282 HKGKDGKVIIIDISIDETSDDRGLTELQLDYDLV-----MLTMFL-------------GKERTKQEWEKLIYDAG-FSSY 342 (358)
T ss_dssp GGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHH-----HHHHHS-------------CCCEEHHHHHHHHHHTT-CCEE
T ss_pred CCCCCcEEEEEEeccCCCCccchhhhHHHhhCHH-----HhccCC-------------CCCCCHHHHHHHHHHcC-CCee
Confidence 9 999998766544332100 0001111111 111111 12569999999999999 8876
Q ss_pred EEEE
Q 017514 285 HLEV 288 (370)
Q Consensus 285 ~le~ 288 (370)
++..
T Consensus 343 ~~~~ 346 (358)
T 1zg3_A 343 KITP 346 (358)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6654
|
| >2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=98.18 E-value=6.3e-06 Score=72.82 Aligned_cols=152 Identities=13% Similarity=0.057 Sum_probs=89.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~ 126 (370)
...+|+|+|||+|..++..+ .. +..+|+.-|.. +.......+ ..+.
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~--------~~--------~~~~v~~vD~s-----------~~~~~~a~~~~~~~~~---- 71 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIF--------VE--------DGYKTYGIEIS-----------DLQLKKAENFSRENNF---- 71 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHH--------HH--------TTCEEEEEECC-----------HHHHHHHHHHHHHHTC----
T ss_pred CCCEEEEECCCCCHHHHHHH--------Hh--------CCCEEEEEECC-----------HHHHHHHHHHHHhcCC----
Confidence 35799999999999876544 11 12578888874 222111111 1122
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
+-.|..+ ++..--+|++++|+++++.++|+++ . .|...+|+.-++
T Consensus 72 -~~~~~~~---d~~~~~~~~~~fD~v~~~~~l~~~~---~----------------------------~~~~~~l~~~~~ 116 (209)
T 2p8j_A 72 -KLNISKG---DIRKLPFKDESMSFVYSYGTIFHMR---K----------------------------NDVKEAIDEIKR 116 (209)
T ss_dssp -CCCEEEC---CTTSCCSCTTCEEEEEECSCGGGSC---H----------------------------HHHHHHHHHHHH
T ss_pred -ceEEEEC---chhhCCCCCCceeEEEEcChHHhCC---H----------------------------HHHHHHHHHHHH
Confidence 1234443 4433235788999999999999853 1 244557888889
Q ss_pred hhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEE
Q 017514 207 ELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTI 283 (370)
Q Consensus 207 EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i 283 (370)
-|+|||++++...+..+....... .+ .+..... ..+.......+.+.+|++..+++.| |..
T Consensus 117 ~LkpgG~l~~~~~~~~~~~~~~~~--~~------------~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~~~g-~~~ 177 (209)
T 2p8j_A 117 VLKPGGLACINFLTTKDERYNKGE--KI------------GEGEFLQ-LERGEKVIHSYVSLEEADKYFKDMK-VLF 177 (209)
T ss_dssp HEEEEEEEEEEEEETTSTTTTCSE--EE------------ETTEEEE-CC-CCCEEEEEECHHHHHHTTTTSE-EEE
T ss_pred HcCCCcEEEEEEecccchhccchh--hh------------cccccee-ccCCCceeEEecCHHHHHHHHhhcC-cee
Confidence 999999999999887553211000 00 0000000 0011112225779999999999888 443
|
| >1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A* | Back alignment and structure |
|---|
Probab=98.16 E-value=3.6e-05 Score=74.50 Aligned_cols=150 Identities=19% Similarity=0.281 Sum_probs=91.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
+..+|+|+|||+|..+..+. +++ |..+++.-|+| . .+ .. .... .+
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~--------~~~-------p~~~~~~~D~~------------~---~~-~~-a~~~---~~ 232 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIIC--------ETF-------PKLKCIVFDRP------------Q---VV-EN-LSGS---NN 232 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHH--------HHC-------TTCEEEEEECH------------H---HH-TT-CCCB---TT
T ss_pred cCceEEEeCCCccHHHHHHH--------HHC-------CCCeEEEeeCH------------H---HH-hh-cccC---CC
Confidence 45799999999998877665 432 45788888975 1 11 00 1111 12
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
+.-+.++|++ -+|+ .|+++++++||.+ |+ .+...+|+.-++-|+
T Consensus 233 --v~~~~~d~~~-~~p~--~D~v~~~~~lh~~---~d----------------------------~~~~~~l~~~~~~L~ 276 (352)
T 1fp2_A 233 --LTYVGGDMFT-SIPN--ADAVLLKYILHNW---TD----------------------------KDCLRILKKCKEAVT 276 (352)
T ss_dssp --EEEEECCTTT-CCCC--CSEEEEESCGGGS---CH----------------------------HHHHHHHHHHHHHHS
T ss_pred --cEEEeccccC-CCCC--ccEEEeehhhccC---CH----------------------------HHHHHHHHHHHHhCC
Confidence 2335568877 3453 9999999999953 31 122347778889999
Q ss_pred c---CceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEE
Q 017514 210 A---EGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHL 286 (370)
Q Consensus 210 ~---GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~l 286 (370)
| ||++++.-...++... ... ... ...+.++.- +. ++ -..++.+|+++.+++.| |++.++
T Consensus 277 p~~~gG~l~i~e~~~~~~~~-~~~---~~~--~~~~~d~~~--------~~-~~--g~~~t~~e~~~ll~~aG-f~~~~~ 338 (352)
T 1fp2_A 277 NDGKRGKVTIIDMVIDKKKD-ENQ---VTQ--IKLLMDVNM--------AC-LN--GKERNEEEWKKLFIEAG-FQHYKI 338 (352)
T ss_dssp GGGCCCEEEEEECEECTTTS-CHH---HHH--HHHHHHHHG--------GG-GT--CCCEEHHHHHHHHHHTT-CCEEEE
T ss_pred CCCCCcEEEEEEeecCCCCC-ccc---hhh--hHhhccHHH--------Hh-cc--CCCCCHHHHHHHHHHCC-CCeeEE
Confidence 9 9999998765544321 100 011 112222210 00 11 23468999999999999 887665
Q ss_pred EE
Q 017514 287 EV 288 (370)
Q Consensus 287 e~ 288 (370)
..
T Consensus 339 ~~ 340 (352)
T 1fp2_A 339 SP 340 (352)
T ss_dssp EE
T ss_pred Ee
Confidence 54
|
| >3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15} | Back alignment and structure |
|---|
Probab=98.12 E-value=1.7e-05 Score=71.56 Aligned_cols=102 Identities=23% Similarity=0.335 Sum_probs=65.1
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHh---hCCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQ---LGSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~---~~~~~~~~ 127 (370)
..+|+|+|||+|..+..+. + . .+++.-|+. +.......+. .+.
T Consensus 34 ~~~vLdiG~G~G~~~~~l~--------~---------~-~~v~~vD~s-----------~~~~~~a~~~~~~~~~----- 79 (243)
T 3d2l_A 34 GKRIADIGCGTGTATLLLA--------D---------H-YEVTGVDLS-----------EEMLEIAQEKAMETNR----- 79 (243)
T ss_dssp TCEEEEESCTTCHHHHHHT--------T---------T-SEEEEEESC-----------HHHHHHHHHHHHHTTC-----
T ss_pred CCeEEEecCCCCHHHHHHh--------h---------C-CeEEEEECC-----------HHHHHHHHHhhhhcCC-----
Confidence 3799999999999877554 1 1 467777764 2222211111 121
Q ss_pred CceEEeecCCCcccccCCCCceeEEEecc-ccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 128 GQCFFTGVPGSFYGRLFPRNSVHLFHSSY-SLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~p~~sv~~~~S~~-alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
+-.|..+ ++.. +.+++++|++++.. ++||+.. + .|...+|+.-++
T Consensus 80 ~~~~~~~---d~~~-~~~~~~fD~v~~~~~~~~~~~~-~-----------------------------~~~~~~l~~~~~ 125 (243)
T 3d2l_A 80 HVDFWVQ---DMRE-LELPEPVDAITILCDSLNYLQT-E-----------------------------ADVKQTFDSAAR 125 (243)
T ss_dssp CCEEEEC---CGGG-CCCSSCEEEEEECTTGGGGCCS-H-----------------------------HHHHHHHHHHHH
T ss_pred ceEEEEc---Chhh-cCCCCCcCEEEEeCCchhhcCC-H-----------------------------HHHHHHHHHHHH
Confidence 2234333 5533 33348999999987 9999632 1 344557888888
Q ss_pred hhccCceEEEEeec
Q 017514 207 ELVAEGRMVLTFLG 220 (370)
Q Consensus 207 EL~~GG~lvl~~~g 220 (370)
-|+|||++++.+..
T Consensus 126 ~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 126 LLTDGGKLLFDVHS 139 (243)
T ss_dssp HEEEEEEEEEEEEC
T ss_pred hcCCCeEEEEEcCC
Confidence 99999999997764
|
| >3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi} | Back alignment and structure |
|---|
Probab=98.04 E-value=6.5e-05 Score=65.11 Aligned_cols=129 Identities=16% Similarity=0.144 Sum_probs=80.8
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCce
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (370)
.-+|+|+|||+|..++.+. ++ - +|+.-|+- +.... . .. +-.
T Consensus 24 ~~~vLD~GcG~G~~~~~l~--------~~---------~-~v~gvD~s-----------~~~~~---~--~~-----~~~ 64 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLR--------KR---------N-TVVSTDLN-----------IRALE---S--HR-----GGN 64 (170)
T ss_dssp SCEEEEETCTTCHHHHHHT--------TT---------S-EEEEEESC-----------HHHHH---T--CS-----SSC
T ss_pred CCeEEEeccCccHHHHHHH--------hc---------C-cEEEEECC-----------HHHHh---c--cc-----CCe
Confidence 3599999999999888665 21 1 77888874 32211 1 11 223
Q ss_pred EEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 017514 131 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 210 (370)
Q Consensus 131 f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~ 210 (370)
|..+ ++.+ .++++++|+++|+..+||.+..+. +.. . .|...+++.-.+.| |
T Consensus 65 ~~~~---d~~~-~~~~~~fD~i~~n~~~~~~~~~~~-~~~--------~---------------~~~~~~~~~~~~~l-p 115 (170)
T 3q87_B 65 LVRA---DLLC-SINQESVDVVVFNPPYVPDTDDPI-IGG--------G---------------YLGREVIDRFVDAV-T 115 (170)
T ss_dssp EEEC---STTT-TBCGGGCSEEEECCCCBTTCCCTT-TBC--------C---------------GGGCHHHHHHHHHC-C
T ss_pred EEEC---Chhh-hcccCCCCEEEECCCCccCCcccc-ccC--------C---------------cchHHHHHHHHhhC-C
Confidence 4444 6655 566799999999999999776433 111 0 11112344444555 9
Q ss_pred CceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEEEe
Q 017514 211 EGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSE 290 (370)
Q Consensus 211 GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~~ 290 (370)
||++++...+. ...+++++.+++.| |++..+....
T Consensus 116 gG~l~~~~~~~--------------------------------------------~~~~~l~~~l~~~g-f~~~~~~~~~ 150 (170)
T 3q87_B 116 VGMLYLLVIEA--------------------------------------------NRPKEVLARLEERG-YGTRILKVRK 150 (170)
T ss_dssp SSEEEEEEEGG--------------------------------------------GCHHHHHHHHHHTT-CEEEEEEEEE
T ss_pred CCEEEEEEecC--------------------------------------------CCHHHHHHHHHHCC-CcEEEEEeec
Confidence 99999977432 14567788888888 8776666554
Q ss_pred ec
Q 017514 291 VN 292 (370)
Q Consensus 291 ~~ 292 (370)
..
T Consensus 151 ~~ 152 (170)
T 3q87_B 151 IL 152 (170)
T ss_dssp CS
T ss_pred cC
Confidence 33
|
| >1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43 | Back alignment and structure |
|---|
Probab=98.02 E-value=1.3e-05 Score=71.60 Aligned_cols=104 Identities=17% Similarity=0.238 Sum_probs=66.0
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~~ 127 (370)
..+|+|+|||+|..+..+. +. + + +++..|+- +.......+ ..+.
T Consensus 39 ~~~vLDlG~G~G~~~~~l~--------~~----~---~--~v~~vD~s-----------~~~~~~a~~~~~~~~~----- 85 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLE--------DY----G---F--EVVGVDIS-----------EDMIRKAREYAKSRES----- 85 (227)
T ss_dssp CCEEEEETCTTSHHHHHHH--------HT----T---C--EEEEEESC-----------HHHHHHHHHHHHHTTC-----
T ss_pred CCeEEEEeccCCHHHHHHH--------Hc----C---C--EEEEEECC-----------HHHHHHHHHHHHhcCC-----
Confidence 5799999999998876554 22 1 2 77777864 222111111 1121
Q ss_pred CceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017514 128 GQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~E 207 (370)
+-.|..+ ++.+--+|++++|+++++.++|+... .|...+|+.-.+-
T Consensus 86 ~~~~~~~---d~~~~~~~~~~~D~v~~~~~~~~~~~-------------------------------~~~~~~l~~~~~~ 131 (227)
T 1ve3_A 86 NVEFIVG---DARKLSFEDKTFDYVIFIDSIVHFEP-------------------------------LELNQVFKEVRRV 131 (227)
T ss_dssp CCEEEEC---CTTSCCSCTTCEEEEEEESCGGGCCH-------------------------------HHHHHHHHHHHHH
T ss_pred CceEEEC---chhcCCCCCCcEEEEEEcCchHhCCH-------------------------------HHHHHHHHHHHHH
Confidence 2244444 65443357889999999998554211 2334577888899
Q ss_pred hccCceEEEEeecc
Q 017514 208 LVAEGRMVLTFLGR 221 (370)
Q Consensus 208 L~~GG~lvl~~~g~ 221 (370)
|+|||++++..+..
T Consensus 132 L~~gG~l~~~~~~~ 145 (227)
T 1ve3_A 132 LKPSGKFIMYFTDL 145 (227)
T ss_dssp EEEEEEEEEEEECH
T ss_pred cCCCcEEEEEecCh
Confidence 99999999987753
|
| >3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=98.02 E-value=5.3e-05 Score=68.07 Aligned_cols=105 Identities=15% Similarity=0.146 Sum_probs=67.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
+..+|+|+|||+|..+..+. +.. + +++.-|+. +.......+... +-
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~--------~~~-------~--~v~~~D~s-----------~~~~~~a~~~~~------~~ 85 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFT--------KEF-------G--DTAGLELS-----------EDMLTHARKRLP------DA 85 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHH--------HHH-------S--EEEEEESC-----------HHHHHHHHHHCT------TC
T ss_pred CCCeEEEecccCCHHHHHHH--------HhC-------C--cEEEEeCC-----------HHHHHHHHHhCC------CC
Confidence 45799999999999887665 321 2 56777764 332222222211 12
Q ss_pred eEEeecCCCcccccCCCCceeEEEe-ccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHS-SYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S-~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
.|..+ ++.. +.+++++|+++| ..++||+.. | .|+..+|+.-.+-|
T Consensus 86 ~~~~~---d~~~-~~~~~~~D~v~~~~~~~~~~~~-~-----------------------------~~~~~~l~~~~~~L 131 (239)
T 3bxo_A 86 TLHQG---DMRD-FRLGRKFSAVVSMFSSVGYLKT-T-----------------------------EELGAAVASFAEHL 131 (239)
T ss_dssp EEEEC---CTTT-CCCSSCEEEEEECTTGGGGCCS-H-----------------------------HHHHHHHHHHHHTE
T ss_pred EEEEC---CHHH-cccCCCCcEEEEcCchHhhcCC-H-----------------------------HHHHHHHHHHHHhc
Confidence 34333 5533 334789999995 459999643 1 34556888889999
Q ss_pred ccCceEEEEeeccC
Q 017514 209 VAEGRMVLTFLGRK 222 (370)
Q Consensus 209 ~~GG~lvl~~~g~~ 222 (370)
+|||++++.....+
T Consensus 132 ~pgG~l~~~~~~~~ 145 (239)
T 3bxo_A 132 EPGGVVVVEPWWFP 145 (239)
T ss_dssp EEEEEEEECCCCCT
T ss_pred CCCeEEEEEeccCc
Confidence 99999999866544
|
| >3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A* | Back alignment and structure |
|---|
Probab=98.02 E-value=2.3e-05 Score=73.13 Aligned_cols=114 Identities=15% Similarity=0.181 Sum_probs=72.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhh---CCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL---GSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~---~~~~~~ 126 (370)
...+|+|+|||+|..++.+. +. + .+|+..|+- +.......+.. +.....
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~--------~~----~-----~~v~gvD~s-----------~~~l~~a~~~~~~~~~~~~~ 108 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLV--------EE----G-----FSVTSVDAS-----------DKMLKYALKERWNRRKEPAF 108 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHH--------HT----T-----CEEEEEESC-----------HHHHHHHHHHHHHTTTSHHH
T ss_pred CCCEEEEecCCCCHHHHHHH--------HC----C-----CeEEEEECC-----------HHHHHHHHHhhhhccccccc
Confidence 35799999999999887665 22 1 478888875 33222221110 000000
Q ss_pred CCceEEeecCCCccc---ccCCCCceeEEEec-cccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYG---RLFPRNSVHLFHSS-YSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLK 202 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~---~l~p~~sv~~~~S~-~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~ 202 (370)
.+-.+..+ ++.. .++|++++|++++. .++|++...+.. .+++..+|+
T Consensus 109 ~~~~~~~~---d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~--------------------------~~~~~~~l~ 159 (293)
T 3thr_A 109 DKWVIEEA---NWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGD--------------------------QSEHRLALK 159 (293)
T ss_dssp HTCEEEEC---CGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSS--------------------------SHHHHHHHH
T ss_pred ceeeEeec---ChhhCccccccCCCeEEEEEcChHHhhcCccccC--------------------------HHHHHHHHH
Confidence 01123333 4433 22789999999999 899997664321 035666888
Q ss_pred HHHHhhccCceEEEEeec
Q 017514 203 CRSEELVAEGRMVLTFLG 220 (370)
Q Consensus 203 ~Ra~EL~~GG~lvl~~~g 220 (370)
.-++-|+|||+|++....
T Consensus 160 ~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 160 NIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp HHHHTEEEEEEEEEEEEC
T ss_pred HHHHHcCCCeEEEEEeCC
Confidence 889999999999998763
|
| >1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53 | Back alignment and structure |
|---|
Probab=98.00 E-value=9.4e-05 Score=66.08 Aligned_cols=164 Identities=15% Similarity=0.146 Sum_probs=90.2
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~~ 127 (370)
.-+|+|+|||+|..++.+. +.+ |..+++.-|+- +.......+ ..+..
T Consensus 42 ~~~vLDiGcG~G~~~~~la--------~~~-------p~~~v~gvD~s-----------~~~l~~a~~~~~~~~~~---- 91 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMA--------KQN-------PDINYIGIDIQ-----------KSVLSYALDKVLEVGVP---- 91 (214)
T ss_dssp CCEEEEESCTTSHHHHHHH--------HHC-------TTSEEEEEESC-----------HHHHHHHHHHHHHHCCS----
T ss_pred CCeEEEEccCcCHHHHHHH--------HHC-------CCCCEEEEEcC-----------HHHHHHHHHHHHHcCCC----
Confidence 4689999999999888665 331 45788888874 222221111 11211
Q ss_pred CceEEeecCCCcc--cccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 128 GQCFFTGVPGSFY--GRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRS 205 (370)
Q Consensus 128 ~~~f~~~vpgSFy--~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra 205 (370)
+-.|+.+ +.. .+.+|++++|++++++..+|...--. +.. -+...||+.-+
T Consensus 92 ~v~~~~~---d~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~-----~~~--------------------~~~~~~l~~~~ 143 (214)
T 1yzh_A 92 NIKLLWV---DGSDLTDYFEDGEIDRLYLNFSDPWPKKRHE-----KRR--------------------LTYKTFLDTFK 143 (214)
T ss_dssp SEEEEEC---CSSCGGGTSCTTCCSEEEEESCCCCCSGGGG-----GGS--------------------TTSHHHHHHHH
T ss_pred CEEEEeC---CHHHHHhhcCCCCCCEEEEECCCCccccchh-----hhc--------------------cCCHHHHHHHH
Confidence 2244444 432 34478899999999988777431000 000 01233677778
Q ss_pred HhhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhh-hccCCcCcccCCHHHHHHHHHhcCceEEE
Q 017514 206 EELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEK-VNCFNIPQYTPSPAEIKSEVIKEGSFTID 284 (370)
Q Consensus 206 ~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~-~d~f~~P~y~~s~eE~~~~ie~~GsF~i~ 284 (370)
+-|+|||.+++..-.. +....++..+.+.|.-..+. .|-...+.......+++.-..+.| +.|-
T Consensus 144 ~~LkpgG~l~~~~~~~--------------~~~~~~~~~~~~~g~~~~~~~~d~~~~~~~~~~~t~~e~~~~~~g-~~i~ 208 (214)
T 1yzh_A 144 RILPENGEIHFKTDNR--------------GLFEYSLVSFSQYGMKLNGVWLDLHASDFEGNVMTEYEQKFSNKG-QVIY 208 (214)
T ss_dssp HHSCTTCEEEEEESCH--------------HHHHHHHHHHHHHTCEEEEEESSGGGSCCCCCCCCHHHHHTGGGC-CCCE
T ss_pred HHcCCCcEEEEEeCCH--------------HHHHHHHHHHHHCCCeeeeccccccccCCCCCCCcHHHHHHHHCC-CCeE
Confidence 8899999998865210 12233333444446422111 122222233334457777777777 5555
Q ss_pred EEE
Q 017514 285 HLE 287 (370)
Q Consensus 285 ~le 287 (370)
++.
T Consensus 209 ~~~ 211 (214)
T 1yzh_A 209 RVE 211 (214)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
|
| >4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=98.00 E-value=4.3e-05 Score=70.71 Aligned_cols=108 Identities=14% Similarity=0.082 Sum_probs=71.9
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCce
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (370)
-.+|+|+|||+|..|..+. +. .| |+-.||--|.- +.....+.+...... +-.
T Consensus 78 G~~VldlG~G~G~~~~~la--------~~---VG---~~G~V~avD~s-----------~~~~~~l~~~a~~~~---ni~ 129 (233)
T 4df3_A 78 GDRILYLGIASGTTASHMS--------DI---IG---PRGRIYGVEFA-----------PRVMRDLLTVVRDRR---NIF 129 (233)
T ss_dssp TCEEEEETCTTSHHHHHHH--------HH---HC---TTCEEEEEECC-----------HHHHHHHHHHSTTCT---TEE
T ss_pred CCEEEEecCcCCHHHHHHH--------HH---hC---CCceEEEEeCC-----------HHHHHHHHHhhHhhc---Cee
Confidence 4799999999999988766 33 23 56788888875 554444433322210 235
Q ss_pred EEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 017514 131 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 210 (370)
Q Consensus 131 f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~ 210 (370)
.+.+..+....--++.+++|++++..+.||- -..++..-.+-|||
T Consensus 130 ~V~~d~~~p~~~~~~~~~vDvVf~d~~~~~~-----------------------------------~~~~l~~~~r~LKp 174 (233)
T 4df3_A 130 PILGDARFPEKYRHLVEGVDGLYADVAQPEQ-----------------------------------AAIVVRNARFFLRD 174 (233)
T ss_dssp EEESCTTCGGGGTTTCCCEEEEEECCCCTTH-----------------------------------HHHHHHHHHHHEEE
T ss_pred EEEEeccCccccccccceEEEEEEeccCChh-----------------------------------HHHHHHHHHHhccC
Confidence 6667666665555678899999876555440 11256666788999
Q ss_pred CceEEEEeecc
Q 017514 211 EGRMVLTFLGR 221 (370)
Q Consensus 211 GG~lvl~~~g~ 221 (370)
||++++..-.+
T Consensus 175 GG~lvI~ik~r 185 (233)
T 4df3_A 175 GGYMLMAIKAR 185 (233)
T ss_dssp EEEEEEEEECC
T ss_pred CCEEEEEEecc
Confidence 99999987544
|
| >3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=97.98 E-value=4.5e-05 Score=68.09 Aligned_cols=34 Identities=24% Similarity=0.260 Sum_probs=26.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLP 98 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp 98 (370)
...+|+|+|||+|..+..+. +.+ |..+|+.-|+-
T Consensus 27 ~~~~vLDiGcG~G~~~~~la--------~~~-------p~~~v~gvD~s 60 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVA--------RQN-------PSRLVVALDAD 60 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHH--------HHC-------TTEEEEEEESC
T ss_pred CCCEEEEecCCCCHHHHHHH--------HHC-------CCCEEEEEECC
Confidence 45799999999999988766 331 45788888985
|
| >1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43 | Back alignment and structure |
|---|
Probab=97.98 E-value=6.8e-05 Score=68.26 Aligned_cols=121 Identities=17% Similarity=0.252 Sum_probs=72.1
Q ss_pred HhHHHHHHHHHhhcccCCCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhH
Q 017514 31 IAKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLA 110 (370)
Q Consensus 31 ~~~~~l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~ 110 (370)
....++++.+..+.. ++..+|+|+|||+|..++.+. +. ..+|+..|+- +
T Consensus 25 ~~~~~~~~~~~~~~~---~~~~~vLDlGcG~G~~~~~l~--------~~---------~~~v~gvD~s-----------~ 73 (252)
T 1wzn_A 25 AEIDFVEEIFKEDAK---REVRRVLDLACGTGIPTLELA--------ER---------GYEVVGLDLH-----------E 73 (252)
T ss_dssp HHHHHHHHHHHHTCS---SCCCEEEEETCTTCHHHHHHH--------HT---------TCEEEEEESC-----------H
T ss_pred HHHHHHHHHHHHhcc---cCCCEEEEeCCCCCHHHHHHH--------HC---------CCeEEEEECC-----------H
Confidence 334555555544321 335799999999999887665 21 2578888874 3
Q ss_pred HHHHHHHHhhC-CCCCCCCceEEeecCCCcccccCCCCceeEEEecc-ccccccCCCCCccCCCceeeecCCCCHHHHHH
Q 017514 111 SFQKILRKQLG-SASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSY-SLQWLSQVPDGLESNKGNIFMASTSPPCVLTA 188 (370)
Q Consensus 111 ~~~~~~~~~~~-~~~~~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~-alhWls~~P~~~~~nk~~i~~~~~s~~~v~~a 188 (370)
.......+... ... +-.|..+ ++.. +.+++++|++++.. ++|+++.
T Consensus 74 ~~l~~a~~~~~~~~~---~v~~~~~---d~~~-~~~~~~fD~v~~~~~~~~~~~~------------------------- 121 (252)
T 1wzn_A 74 EMLRVARRKAKERNL---KIEFLQG---DVLE-IAFKNEFDAVTMFFSTIMYFDE------------------------- 121 (252)
T ss_dssp HHHHHHHHHHHHTTC---CCEEEES---CGGG-CCCCSCEEEEEECSSGGGGSCH-------------------------
T ss_pred HHHHHHHHHHHhcCC---ceEEEEC---Chhh-cccCCCccEEEEcCCchhcCCH-------------------------
Confidence 22222211110 110 1234333 6633 44457899999864 4555311
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCceEEEEeec
Q 017514 189 YYEQFQRDFSLFLKCRSEELVAEGRMVLTFLG 220 (370)
Q Consensus 189 y~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g 220 (370)
.|...+|+.-++-|+|||++++.+..
T Consensus 122 ------~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 122 ------EDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp ------HHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ------HHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 24556788888999999999998764
|
| >3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp} | Back alignment and structure |
|---|
Probab=97.94 E-value=4.6e-05 Score=67.41 Aligned_cols=122 Identities=15% Similarity=0.171 Sum_probs=77.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHh---hCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQ---LGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~---~~~~~~~ 126 (370)
...+|+|+|||+|..++.+. +. +.-+|+.-|+. +......++. .+..
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~--------~~--------~~~~v~~vD~s-----------~~~~~~a~~~~~~~~~~--- 109 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAH--------KL--------GAKSVLATDIS-----------DESMTAAEENAALNGIY--- 109 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHH--------HT--------TCSEEEEEESC-----------HHHHHHHHHHHHHTTCC---
T ss_pred CCCEEEEECCCCCHHHHHHH--------HC--------CCCEEEEEECC-----------HHHHHHHHHHHHHcCCC---
Confidence 34799999999998877643 21 23578888875 3222221111 1211
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
.-.| +.+++.. ++++++|+++++..+||+. .+|+.-.+
T Consensus 110 -~v~~---~~~d~~~--~~~~~fD~i~~~~~~~~~~------------------------------------~~l~~~~~ 147 (205)
T 3grz_A 110 -DIAL---QKTSLLA--DVDGKFDLIVANILAEILL------------------------------------DLIPQLDS 147 (205)
T ss_dssp -CCEE---EESSTTT--TCCSCEEEEEEESCHHHHH------------------------------------HHGGGSGG
T ss_pred -ceEE---Eeccccc--cCCCCceEEEECCcHHHHH------------------------------------HHHHHHHH
Confidence 1123 3335533 3568999999987766632 24555578
Q ss_pred hhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEE
Q 017514 207 ELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHL 286 (370)
Q Consensus 207 EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~l 286 (370)
-|+|||++++...... +.+++...+++.| |++...
T Consensus 148 ~L~~gG~l~~~~~~~~--------------------------------------------~~~~~~~~~~~~G-f~~~~~ 182 (205)
T 3grz_A 148 HLNEDGQVIFSGIDYL--------------------------------------------QLPKIEQALAENS-FQIDLK 182 (205)
T ss_dssp GEEEEEEEEEEEEEGG--------------------------------------------GHHHHHHHHHHTT-EEEEEE
T ss_pred hcCCCCEEEEEecCcc--------------------------------------------cHHHHHHHHHHcC-CceEEe
Confidence 8999999999654322 4778888888888 887665
Q ss_pred EE
Q 017514 287 EV 288 (370)
Q Consensus 287 e~ 288 (370)
..
T Consensus 183 ~~ 184 (205)
T 3grz_A 183 MR 184 (205)
T ss_dssp EE
T ss_pred ec
Confidence 43
|
| >2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.88 E-value=7.4e-05 Score=65.75 Aligned_cols=121 Identities=16% Similarity=0.071 Sum_probs=73.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
...+|+|+|||+|..++.+. +. + +. +|+..|+- +.......+...... +-
T Consensus 42 ~~~~vLdiGcG~G~~~~~l~--------~~----~---~~-~v~~~D~s-----------~~~~~~a~~~~~~~~---~i 91 (215)
T 2pxx_A 42 PEDRILVLGCGNSALSYELF--------LG----G---FP-NVTSVDYS-----------SVVVAAMQACYAHVP---QL 91 (215)
T ss_dssp TTCCEEEETCTTCSHHHHHH--------HT----T---CC-CEEEEESC-----------HHHHHHHHHHTTTCT---TC
T ss_pred CCCeEEEECCCCcHHHHHHH--------Hc----C---CC-cEEEEeCC-----------HHHHHHHHHhcccCC---Cc
Confidence 35799999999999987665 22 1 22 67777764 332222222211100 22
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
.+..+ ++..--+|++++|++++..++|.+....... |. ... ....|...+|+.-.+-|+
T Consensus 92 ~~~~~---d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~-------~~---~~~--------~~~~~~~~~l~~~~~~Lk 150 (215)
T 2pxx_A 92 RWETM---DVRKLDFPSASFDVVLEKGTLDALLAGERDP-------WT---VSS--------EGVHTVDQVLSEVSRVLV 150 (215)
T ss_dssp EEEEC---CTTSCCSCSSCEEEEEEESHHHHHTTTCSCT-------TS---CCH--------HHHHHHHHHHHHHHHHEE
T ss_pred EEEEc---chhcCCCCCCcccEEEECcchhhhccccccc-------cc---ccc--------chhHHHHHHHHHHHHhCc
Confidence 34433 4433235788999999999998765321100 00 011 123566778888899999
Q ss_pred cCceEEEEeecc
Q 017514 210 AEGRMVLTFLGR 221 (370)
Q Consensus 210 ~GG~lvl~~~g~ 221 (370)
|||++++..++.
T Consensus 151 pgG~li~~~~~~ 162 (215)
T 2pxx_A 151 PGGRFISMTSAA 162 (215)
T ss_dssp EEEEEEEEESCC
T ss_pred CCCEEEEEeCCC
Confidence 999999988764
|
| >3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=97.87 E-value=7e-05 Score=70.38 Aligned_cols=100 Identities=10% Similarity=0.007 Sum_probs=63.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
...+|+|+|||+|..|+.+. ++ + .+|+.-|+- +...+..++.... .
T Consensus 45 ~g~~VLDlGcGtG~~a~~La--------~~----g-----~~V~gvD~S-----------~~ml~~Ar~~~~~------~ 90 (261)
T 3iv6_A 45 PGSTVAVIGASTRFLIEKAL--------ER----G-----ASVTVFDFS-----------QRMCDDLAEALAD------R 90 (261)
T ss_dssp TTCEEEEECTTCHHHHHHHH--------HT----T-----CEEEEEESC-----------HHHHHHHHHHTSS------S
T ss_pred CcCEEEEEeCcchHHHHHHH--------hc----C-----CEEEEEECC-----------HHHHHHHHHHHHh------c
Confidence 45799999999999988766 22 1 468888875 4444333333221 1
Q ss_pred eEEeecCCCcccc-----cCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017514 130 CFFTGVPGSFYGR-----LFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCR 204 (370)
Q Consensus 130 ~f~~~vpgSFy~~-----l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~R 204 (370)
+ +.+.+..- -.+++++|+++|+.++||+.. .|+...|+.-
T Consensus 91 -~---v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~~~-------------------------------~~~~~~l~~l 135 (261)
T 3iv6_A 91 -C---VTIDLLDITAEIPKELAGHFDFVLNDRLINRFTT-------------------------------EEARRACLGM 135 (261)
T ss_dssp -C---CEEEECCTTSCCCGGGTTCCSEEEEESCGGGSCH-------------------------------HHHHHHHHHH
T ss_pred -c---ceeeeeecccccccccCCCccEEEEhhhhHhCCH-------------------------------HHHHHHHHHH
Confidence 1 12233111 112678999999999998532 2334456666
Q ss_pred HHhhccCceEEEEee
Q 017514 205 SEELVAEGRMVLTFL 219 (370)
Q Consensus 205 a~EL~~GG~lvl~~~ 219 (370)
++-| |||++++++.
T Consensus 136 ~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 136 LSLV-GSGTVRASVK 149 (261)
T ss_dssp HHHH-TTSEEEEEEE
T ss_pred HHhC-cCcEEEEEec
Confidence 6678 9999999875
|
| >3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae} | Back alignment and structure |
|---|
Probab=97.83 E-value=0.00021 Score=61.13 Aligned_cols=102 Identities=12% Similarity=0.130 Sum_probs=65.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhh-CCCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAAG 128 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~-~~~~~~~~ 128 (370)
...+|+|+|||+|..++.+. +. .|..+|+..|+. +...+...+.. .... ..
T Consensus 25 ~~~~vldiG~G~G~~~~~l~--------~~-------~~~~~v~~vD~~-----------~~~~~~a~~~~~~~~~--~~ 76 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWL--------RS-------TPQTTAVCFEIS-----------EERRERILSNAINLGV--SD 76 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHH--------TT-------SSSEEEEEECSC-----------HHHHHHHHHHHHTTTC--TT
T ss_pred CCCeEEEeCCCCCHHHHHHH--------HH-------CCCCeEEEEeCC-----------HHHHHHHHHHHHHhCC--CC
Confidence 45799999999999888666 22 145788999985 33222222111 1111 12
Q ss_pred ceEEeecCCCcccccCCC--CceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 129 QCFFTGVPGSFYGRLFPR--NSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~--~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
++++.+ +..+ .+|. +++|++++..++|| +. +|+.-.+
T Consensus 77 ~~~~~~---d~~~-~~~~~~~~~D~i~~~~~~~~----~~---------------------------------~l~~~~~ 115 (178)
T 3hm2_A 77 RIAVQQ---GAPR-AFDDVPDNPDVIFIGGGLTA----PG---------------------------------VFAAAWK 115 (178)
T ss_dssp SEEEEC---CTTG-GGGGCCSCCSEEEECC-TTC----TT---------------------------------HHHHHHH
T ss_pred CEEEec---chHh-hhhccCCCCCEEEECCcccH----HH---------------------------------HHHHHHH
Confidence 454443 4433 4444 89999999999988 21 5666678
Q ss_pred hhccCceEEEEeec
Q 017514 207 ELVAEGRMVLTFLG 220 (370)
Q Consensus 207 EL~~GG~lvl~~~g 220 (370)
-|+|||++++..+.
T Consensus 116 ~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 116 RLPVGGRLVANAVT 129 (178)
T ss_dssp TCCTTCEEEEEECS
T ss_pred hcCCCCEEEEEeec
Confidence 89999999988754
|
| >3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A* | Back alignment and structure |
|---|
Probab=97.81 E-value=0.00011 Score=72.60 Aligned_cols=108 Identities=17% Similarity=0.088 Sum_probs=71.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhh-CCCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAAG 128 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~-~~~~~~~~ 128 (370)
...+|+|+|||+|..++.+. ++ ..+|+..|.- +...+...+.. .... .
T Consensus 233 ~~~~VLDlGcG~G~~~~~la--------~~---------g~~V~gvDis-----------~~al~~A~~n~~~~~~---~ 281 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLA--------RM---------GAEVVGVEDD-----------LASVLSLQKGLEANAL---K 281 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHH--------HT---------TCEEEEEESB-----------HHHHHHHHHHHHHTTC---C
T ss_pred CCCEEEEEeeeCCHHHHHHH--------Hc---------CCEEEEEECC-----------HHHHHHHHHHHHHcCC---C
Confidence 35799999999999998776 22 1578888863 22211111111 1111 1
Q ss_pred ceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
-.|+. +++..-+.+++++|+++|+..+||...... .+...||+.-.+-|
T Consensus 282 v~~~~---~D~~~~~~~~~~fD~Ii~npp~~~~~~~~~----------------------------~~~~~~l~~~~~~L 330 (381)
T 3dmg_A 282 AQALH---SDVDEALTEEARFDIIVTNPPFHVGGAVIL----------------------------DVAQAFVNVAAARL 330 (381)
T ss_dssp CEEEE---CSTTTTSCTTCCEEEEEECCCCCTTCSSCC----------------------------HHHHHHHHHHHHHE
T ss_pred eEEEE---cchhhccccCCCeEEEEECCchhhcccccH----------------------------HHHHHHHHHHHHhc
Confidence 23433 477666666789999999999998544331 34556888888999
Q ss_pred ccCceEEEEee
Q 017514 209 VAEGRMVLTFL 219 (370)
Q Consensus 209 ~~GG~lvl~~~ 219 (370)
+|||+++++..
T Consensus 331 kpGG~l~iv~n 341 (381)
T 3dmg_A 331 RPGGVFFLVSN 341 (381)
T ss_dssp EEEEEEEEEEC
T ss_pred CcCcEEEEEEc
Confidence 99999999853
|
| >3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=97.81 E-value=0.00016 Score=65.24 Aligned_cols=69 Identities=16% Similarity=0.217 Sum_probs=43.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
...+|+|+|||+|..+..+. +. ..+|+..|+- +...+...+. .. +-
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~~vD~s-----------~~~~~~a~~~-~~-----~~ 93 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFG--------PQ---------AARWAAYDFS-----------PELLKLARAN-AP-----HA 93 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHG--------GG---------SSEEEEEESC-----------HHHHHHHHHH-CT-----TS
T ss_pred CCCeEEEeCCCCCHHHHHHH--------Hc---------CCEEEEEECC-----------HHHHHHHHHh-CC-----Cc
Confidence 35799999999999887665 21 2578888875 3332222222 11 22
Q ss_pred eEEeecCCCccccc-CC-CCceeEEEec
Q 017514 130 CFFTGVPGSFYGRL-FP-RNSVHLFHSS 155 (370)
Q Consensus 130 ~f~~~vpgSFy~~l-~p-~~sv~~~~S~ 155 (370)
.|..+ ++.+.+ ++ ++++|+++|+
T Consensus 94 ~~~~~---d~~~~~~~~~~~~fD~v~~~ 118 (226)
T 3m33_A 94 DVYEW---NGKGELPAGLGAPFGLIVSR 118 (226)
T ss_dssp EEEEC---CSCSSCCTTCCCCEEEEEEE
T ss_pred eEEEc---chhhccCCcCCCCEEEEEeC
Confidence 45444 554444 35 7899999987
|
| >2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53 | Back alignment and structure |
|---|
Probab=97.80 E-value=6.3e-05 Score=67.71 Aligned_cols=111 Identities=17% Similarity=0.168 Sum_probs=66.6
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhh-CCCCCCCCc
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAAGQ 129 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~-~~~~~~~~~ 129 (370)
.-+|+|+|||+|..++.+. +.+ |..+|+.-|+- +.......+.. ..+. .+
T Consensus 39 ~~~vLDiGcG~G~~~~~la--------~~~-------p~~~v~giD~s-----------~~~l~~a~~~~~~~~~---~n 89 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMA--------KQN-------PDINYIGIELF-----------KSVIVTAVQKVKDSEA---QN 89 (213)
T ss_dssp CCEEEEECCTTSHHHHHHH--------HHC-------TTSEEEEECSC-----------HHHHHHHHHHHHHSCC---SS
T ss_pred CceEEEEecCCCHHHHHHH--------HHC-------CCCCEEEEEec-----------hHHHHHHHHHHHHcCC---CC
Confidence 4689999999999988665 321 55788888875 33222211111 0111 22
Q ss_pred -eEEeecCCCccc--ccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 130 -CFFTGVPGSFYG--RLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 130 -~f~~~vpgSFy~--~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
.|+. ++... ..+|++++|.++..++.+|....- .+..+ ....||+.=++
T Consensus 90 v~~~~---~d~~~l~~~~~~~~~d~v~~~~~~p~~~~~~-----~~~rl--------------------~~~~~l~~~~~ 141 (213)
T 2fca_A 90 VKLLN---IDADTLTDVFEPGEVKRVYLNFSDPWPKKRH-----EKRRL--------------------TYSHFLKKYEE 141 (213)
T ss_dssp EEEEC---CCGGGHHHHCCTTSCCEEEEESCCCCCSGGG-----GGGST--------------------TSHHHHHHHHH
T ss_pred EEEEe---CCHHHHHhhcCcCCcCEEEEECCCCCcCccc-----ccccc--------------------CcHHHHHHHHH
Confidence 3333 34432 347899999999888777743200 00000 01236777788
Q ss_pred hhccCceEEEEe
Q 017514 207 ELVAEGRMVLTF 218 (370)
Q Consensus 207 EL~~GG~lvl~~ 218 (370)
-|+|||.+++..
T Consensus 142 ~LkpgG~l~~~t 153 (213)
T 2fca_A 142 VMGKGGSIHFKT 153 (213)
T ss_dssp HHTTSCEEEEEE
T ss_pred HcCCCCEEEEEe
Confidence 899999999876
|
| >3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=97.80 E-value=7.1e-05 Score=66.19 Aligned_cols=101 Identities=13% Similarity=0.133 Sum_probs=63.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~ 126 (370)
...+|+|+|||+|..++.+. +. + |..+|+.-|.- +......++ ..+.+
T Consensus 40 ~~~~vLDiG~G~G~~~~~la--------~~----~---~~~~v~~vD~s-----------~~~~~~a~~~~~~~~~~--- 90 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEAS--------NL----M---PNGRIFALERN-----------PQYLGFIRDNLKKFVAR--- 90 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHH--------HH----C---TTSEEEEEECC-----------HHHHHHHHHHHHHHTCT---
T ss_pred CCCEEEEECCCCCHHHHHHH--------HH----C---CCCEEEEEeCC-----------HHHHHHHHHHHHHhCCC---
Confidence 35799999999999888666 33 1 45788888874 322222211 11211
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
+-.+.. +++.+.+.+..++|++++..+++ +...+|+.-.+
T Consensus 91 -~v~~~~---~d~~~~~~~~~~~D~i~~~~~~~------------------------------------~~~~~l~~~~~ 130 (204)
T 3e05_A 91 -NVTLVE---AFAPEGLDDLPDPDRVFIGGSGG------------------------------------MLEEIIDAVDR 130 (204)
T ss_dssp -TEEEEE---CCTTTTCTTSCCCSEEEESCCTT------------------------------------CHHHHHHHHHH
T ss_pred -cEEEEe---CChhhhhhcCCCCCEEEECCCCc------------------------------------CHHHHHHHHHH
Confidence 223333 36555454557789998876554 11236777788
Q ss_pred hhccCceEEEEee
Q 017514 207 ELVAEGRMVLTFL 219 (370)
Q Consensus 207 EL~~GG~lvl~~~ 219 (370)
-|+|||++++...
T Consensus 131 ~LkpgG~l~~~~~ 143 (204)
T 3e05_A 131 RLKSEGVIVLNAV 143 (204)
T ss_dssp HCCTTCEEEEEEC
T ss_pred hcCCCeEEEEEec
Confidence 8999999999764
|
| >3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=97.79 E-value=1.5e-05 Score=73.47 Aligned_cols=66 Identities=18% Similarity=0.259 Sum_probs=41.5
Q ss_pred HHHHHHHhhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcC
Q 017514 200 FLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEG 279 (370)
Q Consensus 200 fL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~G 279 (370)
+|+.-.+-|+|||++++.+ .+ .++ ..+..+-+.|.+.... .+..+.+++.+.+++.|
T Consensus 119 ~l~~i~rvLkpgG~lv~~~--~p-----------~~e---~~~~~~~~~G~~~d~~-------~~~~~~~~l~~~l~~aG 175 (232)
T 3opn_A 119 ILPPLYEILEKNGEVAALI--KP-----------QFE---AGREQVGKNGIIRDPK-------VHQMTIEKVLKTATQLG 175 (232)
T ss_dssp THHHHHHHSCTTCEEEEEE--CH-----------HHH---SCHHHHC-CCCCCCHH-------HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhccCCCEEEEEE--Cc-----------ccc---cCHHHhCcCCeecCcc-------hhHHHHHHHHHHHHHCC
Confidence 4566678999999999965 11 121 2222222335432221 23348999999999999
Q ss_pred ceEEEEEEEE
Q 017514 280 SFTIDHLEVS 289 (370)
Q Consensus 280 sF~i~~le~~ 289 (370)
|++..+...
T Consensus 176 -f~v~~~~~~ 184 (232)
T 3opn_A 176 -FSVKGLTFS 184 (232)
T ss_dssp -EEEEEEEEC
T ss_pred -CEEEEEEEc
Confidence 999887754
|
| >3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=4.4e-05 Score=69.30 Aligned_cols=135 Identities=16% Similarity=0.178 Sum_probs=77.0
Q ss_pred HHHHHHHHHhHHHHHHHH-------HhhcccCCCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeC
Q 017514 23 LVQEKVISIAKPITEEAM-------TKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLN 95 (370)
Q Consensus 23 ~~Q~~~~~~~~~~l~~ai-------~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~n 95 (370)
..|+.+++...|-+.-.. .++. ....-+|+|+|||+|..++.+. +.. |...|+--
T Consensus 3 ~~q~~~~~~~~~~~~~~~~~~~~d~~~~f---~~~~~~vLDiGcG~G~~~~~lA--------~~~-------p~~~v~gi 64 (218)
T 3dxy_A 3 SGQEHALENYWPVMGVEFSEDMLDFPALF---GREAPVTLEIGFGMGASLVAMA--------KDR-------PEQDFLGI 64 (218)
T ss_dssp ----CHHHHHHHHHBCCCCSSCCCHHHHH---SSCCCEEEEESCTTCHHHHHHH--------HHC-------TTSEEEEE
T ss_pred HHHHHHHHHHhHHhCCCCCCCCCCHHHHc---CCCCCeEEEEeeeChHHHHHHH--------HHC-------CCCeEEEE
Confidence 457777777666543110 0111 1235689999999999888665 321 56788888
Q ss_pred CCCCCchHHHHHhhHHHHHHHHHh---hCCCCCCCCceEEeecCCCcc---cccCCCCceeEEEeccccccccCCCCCcc
Q 017514 96 DLPGNDFNTIFRSLASFQKILRKQ---LGSASGAAGQCFFTGVPGSFY---GRLFPRNSVHLFHSSYSLQWLSQVPDGLE 169 (370)
Q Consensus 96 Dlp~NDFntLF~~l~~~~~~~~~~---~~~~~~~~~~~f~~~vpgSFy---~~l~p~~sv~~~~S~~alhWls~~P~~~~ 169 (370)
|+- +.......+. .+.. +-.|+. ++.. ...+|++|+|.+++++...|-...-
T Consensus 65 D~s-----------~~~l~~a~~~~~~~~l~----nv~~~~---~Da~~~l~~~~~~~~~d~v~~~~~~p~~~~~~---- 122 (218)
T 3dxy_A 65 EVH-----------SPGVGACLASAHEEGLS----NLRVMC---HDAVEVLHKMIPDNSLRMVQLFFPDPWHKARH---- 122 (218)
T ss_dssp CSC-----------HHHHHHHHHHHHHTTCS----SEEEEC---SCHHHHHHHHSCTTCEEEEEEESCCCCCSGGG----
T ss_pred Eec-----------HHHHHHHHHHHHHhCCC----cEEEEE---CCHHHHHHHHcCCCChheEEEeCCCCccchhh----
Confidence 885 3322222111 1211 223333 3542 2358999999999999988832210
Q ss_pred CCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEe
Q 017514 170 SNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTF 218 (370)
Q Consensus 170 ~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~ 218 (370)
.+.++. . ..||+.-++-|+|||++++..
T Consensus 123 -~~rr~~-----~---------------~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 123 -NKRRIV-----Q---------------VPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp -GGGSSC-----S---------------HHHHHHHHHHEEEEEEEEEEE
T ss_pred -hhhhhh-----h---------------HHHHHHHHHHcCCCcEEEEEe
Confidence 011110 0 126777788999999999876
|
| >1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4 | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00022 Score=61.35 Aligned_cols=104 Identities=13% Similarity=0.139 Sum_probs=67.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHh---hCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQ---LGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~---~~~~~~~ 126 (370)
...+|+|+|||+|..++.+. +. ..+++..|+- +.......+. .+..
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~--------~~---------~~~v~~~D~~-----------~~~~~~a~~~~~~~~~~--- 100 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALA--------DE---------VKSTTMADIN-----------RRAIKLAKENIKLNNLD--- 100 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHG--------GG---------SSEEEEEESC-----------HHHHHHHHHHHHHTTCT---
T ss_pred CCCeEEEeCCCCCHHHHHHH--------Hc---------CCeEEEEECC-----------HHHHHHHHHHHHHcCCC---
Confidence 45799999999999887655 11 2577788864 2222211111 1210
Q ss_pred CC--ceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AG--QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCR 204 (370)
Q Consensus 127 ~~--~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~R 204 (370)
. -.+.. +++.. .++++++|+++++..+|| . ..++..+|+.-
T Consensus 101 -~~~~~~~~---~d~~~-~~~~~~~D~v~~~~~~~~----~----------------------------~~~~~~~l~~~ 143 (194)
T 1dus_A 101 -NYDIRVVH---SDLYE-NVKDRKYNKIITNPPIRA----G----------------------------KEVLHRIIEEG 143 (194)
T ss_dssp -TSCEEEEE---CSTTT-TCTTSCEEEEEECCCSTT----C----------------------------HHHHHHHHHHH
T ss_pred -ccceEEEE---Cchhc-ccccCCceEEEECCCccc----c----------------------------hhHHHHHHHHH
Confidence 1 23333 36644 556889999999888877 1 02445578888
Q ss_pred HHhhccCceEEEEeecc
Q 017514 205 SEELVAEGRMVLTFLGR 221 (370)
Q Consensus 205 a~EL~~GG~lvl~~~g~ 221 (370)
.+-|+|||++++.....
T Consensus 144 ~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 144 KELLKDNGEIWVVIQTK 160 (194)
T ss_dssp HHHEEEEEEEEEEEEST
T ss_pred HHHcCCCCEEEEEECCC
Confidence 89999999999998754
|
| >2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00013 Score=63.93 Aligned_cols=55 Identities=4% Similarity=-0.001 Sum_probs=36.3
Q ss_pred CCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeec
Q 017514 144 FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLG 220 (370)
Q Consensus 144 ~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g 220 (370)
+|++++|+++|..++||... + ..+.+. ..+....+|+.-.+-|+|||.|++.+..
T Consensus 102 ~~~~~fD~v~~~~~~~~~g~-~-------------------~~d~~~--~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 102 LQDKKIDIILSDAAVPCIGN-K-------------------IDDHLN--SCELTLSITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp HTTCCEEEEEECCCCCCCSC-H-------------------HHHHHH--HHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCCCcccEEEeCCCcCCCCC-c-------------------ccCHHH--HHHHHHHHHHHHHHHccCCCEEEEEEeC
Confidence 57789999999999998421 0 000010 1122344676667889999999997764
|
| >3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00029 Score=68.37 Aligned_cols=105 Identities=15% Similarity=0.139 Sum_probs=66.5
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCce
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (370)
..+|+|+|||+|..++.+. +. +..+|+.-|+. +.-...+.. . +..+..- +-.
T Consensus 67 ~~~VLDvGcG~G~~~~~la--------~~--------g~~~v~gvD~s--~~l~~a~~~------~-~~~~~~~---~v~ 118 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAA--------KA--------GARKVIGIECS--SISDYAVKI------V-KANKLDH---VVT 118 (349)
T ss_dssp TCEEEEESCTTSHHHHHHH--------HT--------TCSEEEEEECS--THHHHHHHH------H-HHTTCTT---TEE
T ss_pred CCEEEEEeccchHHHHHHH--------HC--------CCCEEEEECcH--HHHHHHHHH------H-HHcCCCC---cEE
Confidence 4789999999999888766 22 23588888875 222121111 1 1112110 124
Q ss_pred EEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 017514 131 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 210 (370)
Q Consensus 131 f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~ 210 (370)
|+.+ +..+--+|++++|+++|....+++...+ ++..+|+.+.+-|+|
T Consensus 119 ~~~~---d~~~~~~~~~~fD~Iis~~~~~~l~~~~------------------------------~~~~~l~~~~r~Lkp 165 (349)
T 3q7e_A 119 IIKG---KVEEVELPVEKVDIIISEWMGYCLFYES------------------------------MLNTVLHARDKWLAP 165 (349)
T ss_dssp EEES---CTTTCCCSSSCEEEEEECCCBBTBTBTC------------------------------CHHHHHHHHHHHEEE
T ss_pred EEEC---cHHHccCCCCceEEEEEccccccccCch------------------------------hHHHHHHHHHHhCCC
Confidence 4444 6644446889999999987666654322 234588999999999
Q ss_pred CceEEE
Q 017514 211 EGRMVL 216 (370)
Q Consensus 211 GG~lvl 216 (370)
||+|+.
T Consensus 166 gG~li~ 171 (349)
T 3q7e_A 166 DGLIFP 171 (349)
T ss_dssp EEEEES
T ss_pred CCEEcc
Confidence 999973
|
| >1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A* | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00089 Score=56.27 Aligned_cols=110 Identities=18% Similarity=0.233 Sum_probs=68.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
...+|+|+|||+|..+..+. +.+ + |..+++..|+.. .- .+ . +-
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~--------~~~---~---~~~~v~~~D~~~--~~----~~-----------~------~~ 64 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVV--------TQI---G---GKGRIIACDLLP--MD----PI-----------V------GV 64 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHH--------HHH---C---TTCEEEEEESSC--CC----CC-----------T------TE
T ss_pred CCCeEEEeCCCCCHHHHHHH--------HHh---C---CCCeEEEEECcc--cc----cc-----------C------cE
Confidence 34699999999999888666 221 1 336777777642 10 00 0 22
Q ss_pred eEEeecCCCccccc--------CCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHH
Q 017514 130 CFFTGVPGSFYGRL--------FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFL 201 (370)
Q Consensus 130 ~f~~~vpgSFy~~l--------~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL 201 (370)
.+..+ ++..-- +|++++|++++...+||...... .. .........+|
T Consensus 65 ~~~~~---d~~~~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~-----------------~~-----~~~~~~~~~~l 119 (180)
T 1ej0_A 65 DFLQG---DFRDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAV-----------------DI-----PRAMYLVELAL 119 (180)
T ss_dssp EEEES---CTTSHHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHH-----------------HH-----HHHHHHHHHHH
T ss_pred EEEEc---ccccchhhhhhhccCCCCceeEEEECCCccccCCCcc-----------------ch-----HHHHHHHHHHH
Confidence 33333 443221 67889999999999999544110 00 00112235678
Q ss_pred HHHHHhhccCceEEEEeecc
Q 017514 202 KCRSEELVAEGRMVLTFLGR 221 (370)
Q Consensus 202 ~~Ra~EL~~GG~lvl~~~g~ 221 (370)
+.-.+-|+|||.+++.....
T Consensus 120 ~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 120 EMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp HHHHHHEEEEEEEEEEEESS
T ss_pred HHHHHHcCCCcEEEEEEecC
Confidence 77788999999999987654
|
| >1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00018 Score=65.30 Aligned_cols=109 Identities=11% Similarity=0.050 Sum_probs=65.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
...+|+|+|||+|..+..+. +. .+ -+|+.-|+- +...+...+..... + .+-
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~--------~~-------~~-~~v~gvD~s-----------~~~l~~a~~~~~~~-~-~~v 110 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQ--------EA-------PI-DEHWIIECN-----------DGVFQRLRDWAPRQ-T-HKV 110 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHH--------TS-------CE-EEEEEEECC-----------HHHHHHHHHHGGGC-S-SEE
T ss_pred CCCeEEEEeccCCHHHHHHH--------hc-------CC-CeEEEEcCC-----------HHHHHHHHHHHHhc-C-CCe
Confidence 35799999999998887554 21 12 377888875 43333322222110 0 022
Q ss_pred eEEeecCCCcccc--cCCCCceeEEEe-ccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 130 CFFTGVPGSFYGR--LFPRNSVHLFHS-SYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 130 ~f~~~vpgSFy~~--l~p~~sv~~~~S-~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
.|+. +++.+- -+|++++|++++ .+++++ ..... .++..+|+.-++
T Consensus 111 ~~~~---~d~~~~~~~~~~~~fD~V~~d~~~~~~-~~~~~----------------------------~~~~~~l~~~~r 158 (236)
T 1zx0_A 111 IPLK---GLWEDVAPTLPDGHFDGILYDTYPLSE-ETWHT----------------------------HQFNFIKNHAFR 158 (236)
T ss_dssp EEEE---SCHHHHGGGSCTTCEEEEEECCCCCBG-GGTTT----------------------------HHHHHHHHTHHH
T ss_pred EEEe---cCHHHhhcccCCCceEEEEECCcccch-hhhhh----------------------------hhHHHHHHHHHH
Confidence 3433 366433 368899999999 666522 11110 234457777788
Q ss_pred hhccCceEEEEee
Q 017514 207 ELVAEGRMVLTFL 219 (370)
Q Consensus 207 EL~~GG~lvl~~~ 219 (370)
-|+|||+|++...
T Consensus 159 ~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 159 LLKPGGVLTYCNL 171 (236)
T ss_dssp HEEEEEEEEECCH
T ss_pred hcCCCeEEEEEec
Confidence 9999999987643
|
| >3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00066 Score=58.71 Aligned_cols=111 Identities=14% Similarity=0.183 Sum_probs=61.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~ 126 (370)
..-+|+|+|||+|..|+.+. ++ ..+|+.-|+- +......++ ..+..
T Consensus 22 ~~~~vLDiGcG~G~~~~~la--------~~---------~~~v~~vD~s-----------~~~l~~a~~~~~~~~~~--- 70 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLA--------GL---------SKKVYAFDVQ-----------EQALGKTSQRLSDLGIE--- 70 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHH--------TT---------SSEEEEEESC-----------HHHHHHHHHHHHHHTCC---
T ss_pred CCCEEEEEcCCCCHHHHHHH--------Hh---------CCEEEEEECC-----------HHHHHHHHHHHHHcCCC---
Confidence 34799999999999998766 21 2678888875 332222211 11211
Q ss_pred CCceEEeecCCCccccc--CCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRL--FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCR 204 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l--~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~R 204 (370)
+-.|.. +++ ..+ ++++++|+++++ ++|+......+. .. ..+...+|+.-
T Consensus 71 -~v~~~~---~~~-~~l~~~~~~~fD~v~~~--~~~~~~~~~~~~-----------~~-----------~~~~~~~l~~~ 121 (185)
T 3mti_A 71 -NTELIL---DGH-ENLDHYVREPIRAAIFN--LGYLPSADKSVI-----------TK-----------PHTTLEAIEKI 121 (185)
T ss_dssp -CEEEEE---SCG-GGGGGTCCSCEEEEEEE--EC----------------------C-----------HHHHHHHHHHH
T ss_pred -cEEEEe---CcH-HHHHhhccCCcCEEEEe--CCCCCCcchhcc-----------cC-----------hhhHHHHHHHH
Confidence 223433 344 232 457899999776 345332111110 00 12334467777
Q ss_pred HHhhccCceEEEEeec
Q 017514 205 SEELVAEGRMVLTFLG 220 (370)
Q Consensus 205 a~EL~~GG~lvl~~~g 220 (370)
.+-|+|||++++....
T Consensus 122 ~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 122 LDRLEVGGRLAIMIYY 137 (185)
T ss_dssp HHHEEEEEEEEEEEC-
T ss_pred HHhcCCCcEEEEEEeC
Confidence 7889999999998764
|
| >2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.59 E-value=3.3e-05 Score=74.80 Aligned_cols=107 Identities=15% Similarity=0.196 Sum_probs=69.1
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhh-CCCCCCCCc
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAAGQ 129 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~-~~~~~~~~~ 129 (370)
.-+|+|+|||+|..++.+. +. + |..+|+..|.. +.......+.. .... ..
T Consensus 197 ~~~VLDlGcG~G~~~~~la--------~~----~---~~~~v~~vD~s-----------~~~l~~a~~~~~~~~~---~~ 247 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFA--------RH----S---PKIRLTLCDVS-----------APAVEASRATLAANGV---EG 247 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHH--------HH----C---TTCBCEEEESB-----------HHHHHHHHHHHHHTTC---CC
T ss_pred CCeEEEecCccCHHHHHHH--------HH----C---CCCEEEEEECC-----------HHHHHHHHHHHHHhCC---CC
Confidence 3589999999999988665 32 1 45688888875 22222211111 0111 12
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
.+ +.++++. ++++++|+++++..+||.... ...+...||+.-.+-|+
T Consensus 248 ~~---~~~d~~~--~~~~~fD~Iv~~~~~~~g~~~----------------------------~~~~~~~~l~~~~~~Lk 294 (343)
T 2pjd_A 248 EV---FASNVFS--EVKGRFDMIISNPPFHDGMQT----------------------------SLDAAQTLIRGAVRHLN 294 (343)
T ss_dssp EE---EECSTTT--TCCSCEEEEEECCCCCSSSHH----------------------------HHHHHHHHHHHHGGGEE
T ss_pred EE---EEccccc--cccCCeeEEEECCCcccCccC----------------------------CHHHHHHHHHHHHHhCC
Confidence 33 3346644 347899999999999983210 11456678999999999
Q ss_pred cCceEEEEee
Q 017514 210 AEGRMVLTFL 219 (370)
Q Consensus 210 ~GG~lvl~~~ 219 (370)
|||.+++...
T Consensus 295 pgG~l~i~~~ 304 (343)
T 2pjd_A 295 SGGELRIVAN 304 (343)
T ss_dssp EEEEEEEEEE
T ss_pred CCcEEEEEEc
Confidence 9999999764
|
| >1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A | Back alignment and structure |
|---|
Probab=97.57 E-value=0.0011 Score=59.99 Aligned_cols=102 Identities=17% Similarity=0.143 Sum_probs=59.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
...+|+|+|||+|..++.+. +.+ +.-+|+.-|.- +.......+...... +-
T Consensus 74 ~~~~VLDlGcG~G~~~~~la--------~~~-------~~~~v~gvD~s-----------~~~~~~a~~~~~~~~---~v 124 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVA--------DIA-------DKGIVYAIEYA-----------PRIMRELLDACAERE---NI 124 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHH--------HHT-------TTSEEEEEESC-----------HHHHHHHHHHTTTCT---TE
T ss_pred CCCEEEEEcccCCHHHHHHH--------HHc-------CCcEEEEEECC-----------HHHHHHHHHHhhcCC---Ce
Confidence 45799999999999988766 331 23578888875 332222222211110 22
Q ss_pred eEEeecCCCccc----ccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 130 CFFTGVPGSFYG----RLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRS 205 (370)
Q Consensus 130 ~f~~~vpgSFy~----~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra 205 (370)
.|+.+ +... ..++ +++|+++ |++.. |. ....+|+.-.
T Consensus 125 ~~~~~---d~~~~~~~~~~~-~~~D~v~-----~~~~~-~~-----------------------------~~~~~l~~~~ 165 (230)
T 1fbn_A 125 IPILG---DANKPQEYANIV-EKVDVIY-----EDVAQ-PN-----------------------------QAEILIKNAK 165 (230)
T ss_dssp EEEEC---CTTCGGGGTTTS-CCEEEEE-----ECCCS-TT-----------------------------HHHHHHHHHH
T ss_pred EEEEC---CCCCcccccccC-ccEEEEE-----EecCC-hh-----------------------------HHHHHHHHHH
Confidence 44444 4422 2334 7899998 44221 10 1123566677
Q ss_pred HhhccCceEEEEee
Q 017514 206 EELVAEGRMVLTFL 219 (370)
Q Consensus 206 ~EL~~GG~lvl~~~ 219 (370)
+-|+|||++++.+.
T Consensus 166 ~~LkpgG~l~i~~~ 179 (230)
T 1fbn_A 166 WFLKKGGYGMIAIK 179 (230)
T ss_dssp HHEEEEEEEEEEEE
T ss_pred HhCCCCcEEEEEEe
Confidence 89999999999854
|
| >3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00079 Score=66.02 Aligned_cols=107 Identities=19% Similarity=0.183 Sum_probs=67.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
+..+|+|+|||+|..++.+. +. | . -+|+.-|+. +.-...+..- +..+... +-
T Consensus 63 ~~~~VLDlGcGtG~ls~~la--------~~----g---~-~~V~gvD~s--~~~~~a~~~~-------~~~~~~~---~v 114 (376)
T 3r0q_C 63 EGKTVLDVGTGSGILAIWSA--------QA----G---A-RKVYAVEAT--KMADHARALV-------KANNLDH---IV 114 (376)
T ss_dssp TTCEEEEESCTTTHHHHHHH--------HT----T---C-SEEEEEESS--TTHHHHHHHH-------HHTTCTT---TE
T ss_pred CCCEEEEeccCcCHHHHHHH--------hc----C---C-CEEEEEccH--HHHHHHHHHH-------HHcCCCC---eE
Confidence 45799999999999887665 22 2 1 378888874 3333222221 1112110 12
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
.|+.+ +.. .+.+++++|+++|....|++... .++..+|+.+.+-|+
T Consensus 115 ~~~~~---d~~-~~~~~~~~D~Iv~~~~~~~l~~e------------------------------~~~~~~l~~~~~~Lk 160 (376)
T 3r0q_C 115 EVIEG---SVE-DISLPEKVDVIISEWMGYFLLRE------------------------------SMFDSVISARDRWLK 160 (376)
T ss_dssp EEEES---CGG-GCCCSSCEEEEEECCCBTTBTTT------------------------------CTHHHHHHHHHHHEE
T ss_pred EEEEC---chh-hcCcCCcceEEEEcChhhcccch------------------------------HHHHHHHHHHHhhCC
Confidence 44444 663 33334999999997777776432 134558999999999
Q ss_pred cCceEEEEe
Q 017514 210 AEGRMVLTF 218 (370)
Q Consensus 210 ~GG~lvl~~ 218 (370)
|||+|++.-
T Consensus 161 pgG~li~~~ 169 (376)
T 3r0q_C 161 PTGVMYPSH 169 (376)
T ss_dssp EEEEEESSE
T ss_pred CCeEEEEec
Confidence 999997653
|
| >3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.53 E-value=0.001 Score=60.97 Aligned_cols=115 Identities=11% Similarity=0.152 Sum_probs=63.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHh-------hCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQ-------LGS 122 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~-------~~~ 122 (370)
+..+|+|+|||+|..++.+. +. .|...|+--|+- +.......+. ...
T Consensus 46 ~~~~vLDiGcG~G~~~~~la--------~~-------~p~~~v~GiDis-----------~~~l~~A~~~~~~l~~~~~~ 99 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELS--------PL-------FPDTLILGLEIR-----------VKVSDYVQDRIRALRAAPAG 99 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHG--------GG-------STTSEEEEEESC-----------HHHHHHHHHHHHHHHHSTTC
T ss_pred CCCeEEEEccCCcHHHHHHH--------HH-------CCCCeEEEEECC-----------HHHHHHHHHHHHHHHHHHhc
Confidence 46799999999999887655 22 155778888874 2221111100 001
Q ss_pred CCCCCCc-eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHH
Q 017514 123 ASGAAGQ-CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFL 201 (370)
Q Consensus 123 ~~~~~~~-~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL 201 (370)
.. .+ .|+.+=...+....+|++++|.++..+.-.|..+. . .|.++ ....||
T Consensus 100 ~~---~nv~~~~~d~~~~l~~~~~~~~~D~v~~~~~dp~~k~~-h----~krr~--------------------~~~~~l 151 (235)
T 3ckk_A 100 GF---QNIACLRSNAMKHLPNFFYKGQLTKMFFLFPDPHFKRT-K----HKWRI--------------------ISPTLL 151 (235)
T ss_dssp CC---TTEEEEECCTTTCHHHHCCTTCEEEEEEESCC----------------C--------------------CCHHHH
T ss_pred CC---CeEEEEECcHHHhhhhhCCCcCeeEEEEeCCCchhhhh-h----hhhhh--------------------hhHHHH
Confidence 11 23 34444111222234789999999988777773220 0 01110 012367
Q ss_pred HHHHHhhccCceEEEEe
Q 017514 202 KCRSEELVAEGRMVLTF 218 (370)
Q Consensus 202 ~~Ra~EL~~GG~lvl~~ 218 (370)
+.=++-|+|||+|++..
T Consensus 152 ~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 152 AEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp HHHHHHEEEEEEEEEEE
T ss_pred HHHHHHCCCCCEEEEEe
Confidence 77789999999999876
|
| >3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00032 Score=62.04 Aligned_cols=97 Identities=16% Similarity=0.156 Sum_probs=63.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~ 126 (370)
...+|+|+|||+|..+..+. +. ..+|+.-|.- +.......+ ..+..
T Consensus 77 ~~~~vLdiG~G~G~~~~~la--------~~---------~~~v~~vD~~-----------~~~~~~a~~~~~~~~~~--- 125 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAILA--------HL---------VQHVCSVERI-----------KGLQWQARRRLKNLDLH--- 125 (210)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------HH---------SSEEEEEESC-----------HHHHHHHHHHHHHTTCC---
T ss_pred CCCEEEEEcCCCCHHHHHHH--------Hh---------CCEEEEEecC-----------HHHHHHHHHHHHHcCCC---
Confidence 45799999999999987665 22 1467777764 222222111 11211
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
+-.|.. ++..+.+.+.+++|++++..++||+ |+ ++ .+
T Consensus 126 -~v~~~~---~d~~~~~~~~~~~D~i~~~~~~~~~---~~-----------------~~-------------------~~ 162 (210)
T 3lbf_A 126 -NVSTRH---GDGWQGWQARAPFDAIIVTAAPPEI---PT-----------------AL-------------------MT 162 (210)
T ss_dssp -SEEEEE---SCGGGCCGGGCCEEEEEESSBCSSC---CT-----------------HH-------------------HH
T ss_pred -ceEEEE---CCcccCCccCCCccEEEEccchhhh---hH-----------------HH-------------------HH
Confidence 223433 4776666677899999999999884 32 11 56
Q ss_pred hhccCceEEEEeec
Q 017514 207 ELVAEGRMVLTFLG 220 (370)
Q Consensus 207 EL~~GG~lvl~~~g 220 (370)
-|+|||+|++.+..
T Consensus 163 ~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 163 QLDEGGILVLPVGE 176 (210)
T ss_dssp TEEEEEEEEEEECS
T ss_pred hcccCcEEEEEEcC
Confidence 79999999999876
|
| >4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00024 Score=69.98 Aligned_cols=108 Identities=14% Similarity=0.093 Sum_probs=64.5
Q ss_pred eEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCCCC
Q 017514 52 VAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGAAG 128 (370)
Q Consensus 52 ~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~~~ 128 (370)
.+|+|+|||+|..++.+. +++ |..+|+..|.- +.......+ ..+..- ...
T Consensus 224 ~~VLDlGcG~G~~s~~la--------~~~-------p~~~V~gvD~s-----------~~al~~Ar~n~~~ngl~~-~~~ 276 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLL--------DKN-------PQAKVVFVDES-----------PMAVASSRLNVETNMPEA-LDR 276 (375)
T ss_dssp SEEEEETCTTCHHHHHHH--------HHC-------TTCEEEEEESC-----------HHHHHHHHHHHHHHCGGG-GGG
T ss_pred CeEEEEeCcchHHHHHHH--------HHC-------CCCEEEEEECc-----------HHHHHHHHHHHHHcCCCc-Cce
Confidence 799999999999988776 331 45788888874 222111111 112100 001
Q ss_pred ceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
-.|.. ++++. -+|++++|+++++-.+|+...++... ...||+.-.+-|
T Consensus 277 v~~~~---~D~~~-~~~~~~fD~Ii~nppfh~~~~~~~~~----------------------------~~~~l~~~~~~L 324 (375)
T 4dcm_A 277 CEFMI---NNALS-GVEPFRFNAVLCNPPFHQQHALTDNV----------------------------AWEMFHHARRCL 324 (375)
T ss_dssp EEEEE---CSTTT-TCCTTCEEEEEECCCC-------CCH----------------------------HHHHHHHHHHHE
T ss_pred EEEEe---chhhc-cCCCCCeeEEEECCCcccCcccCHHH----------------------------HHHHHHHHHHhC
Confidence 12333 36655 46888999999999999855444311 113677778889
Q ss_pred ccCceEEEEe
Q 017514 209 VAEGRMVLTF 218 (370)
Q Consensus 209 ~~GG~lvl~~ 218 (370)
+|||+++++.
T Consensus 325 kpgG~l~iv~ 334 (375)
T 4dcm_A 325 KINGELYIVA 334 (375)
T ss_dssp EEEEEEEEEE
T ss_pred CCCcEEEEEE
Confidence 9999999975
|
| >2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A* | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00021 Score=66.11 Aligned_cols=122 Identities=18% Similarity=0.215 Sum_probs=74.9
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhh-CCCCCCCCc
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAAGQ 129 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~-~~~~~~~~~ 129 (370)
..+|+|+|||+|..++.+. +. | + +|+..|.- +.......+.. .... .-
T Consensus 121 ~~~VLDiGcG~G~l~~~la--------~~----g---~--~v~gvDi~-----------~~~v~~a~~n~~~~~~---~v 169 (254)
T 2nxc_A 121 GDKVLDLGTGSGVLAIAAE--------KL----G---G--KALGVDID-----------PMVLPQAEANAKRNGV---RP 169 (254)
T ss_dssp TCEEEEETCTTSHHHHHHH--------HT----T---C--EEEEEESC-----------GGGHHHHHHHHHHTTC---CC
T ss_pred CCEEEEecCCCcHHHHHHH--------Hh----C---C--eEEEEECC-----------HHHHHHHHHHHHHcCC---cE
Confidence 4699999999998877544 21 2 2 78888874 22222211111 1111 11
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
.| +.+++.. .+|++++|+++++...|++ ..++..-.+-|+
T Consensus 170 ~~---~~~d~~~-~~~~~~fD~Vv~n~~~~~~------------------------------------~~~l~~~~~~Lk 209 (254)
T 2nxc_A 170 RF---LEGSLEA-ALPFGPFDLLVANLYAELH------------------------------------AALAPRYREALV 209 (254)
T ss_dssp EE---EESCHHH-HGGGCCEEEEEEECCHHHH------------------------------------HHHHHHHHHHEE
T ss_pred EE---EECChhh-cCcCCCCCEEEECCcHHHH------------------------------------HHHHHHHHHHcC
Confidence 22 2335543 3578899999987544432 235666678899
Q ss_pred cCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEE
Q 017514 210 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEV 288 (370)
Q Consensus 210 ~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~ 288 (370)
|||++++...... +.+++.+.+++.| |++.+...
T Consensus 210 pgG~lils~~~~~--------------------------------------------~~~~v~~~l~~~G-f~~~~~~~ 243 (254)
T 2nxc_A 210 PGGRALLTGILKD--------------------------------------------RAPLVREAMAGAG-FRPLEEAA 243 (254)
T ss_dssp EEEEEEEEEEEGG--------------------------------------------GHHHHHHHHHHTT-CEEEEEEE
T ss_pred CCCEEEEEeeccC--------------------------------------------CHHHHHHHHHHCC-CEEEEEec
Confidence 9999999744211 2678888999888 88766543
|
| >3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00098 Score=58.07 Aligned_cols=108 Identities=17% Similarity=0.097 Sum_probs=66.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~ 126 (370)
...+|+|+|||+|..++.++ ++ +.-+|+.-|+- +......++ ..+.+
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~--------~~--------~~~~v~~vD~~-----------~~~~~~a~~~~~~~~~~--- 93 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEAL--------SR--------GAASVLFVESD-----------QRSAAVIARNIEALGLS--- 93 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHH--------HT--------TCSEEEEEECC-----------HHHHHHHHHHHHHHTCS---
T ss_pred CCCEEEEeCCCcCHHHHHHH--------HC--------CCCeEEEEECC-----------HHHHHHHHHHHHHcCCC---
Confidence 34689999999999988655 21 22578888874 222221111 11211
Q ss_pred CCceEEeecCCCccccc--CCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRL--FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCR 204 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l--~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~R 204 (370)
+-.|+.+ ++.+-+ ++++++|++++...+||.. .++..+|+.-
T Consensus 94 -~v~~~~~---d~~~~~~~~~~~~fD~i~~~~p~~~~~--------------------------------~~~~~~l~~~ 137 (189)
T 3p9n_A 94 -GATLRRG---AVAAVVAAGTTSPVDLVLADPPYNVDS--------------------------------ADVDAILAAL 137 (189)
T ss_dssp -CEEEEES---CHHHHHHHCCSSCCSEEEECCCTTSCH--------------------------------HHHHHHHHHH
T ss_pred -ceEEEEc---cHHHHHhhccCCCccEEEECCCCCcch--------------------------------hhHHHHHHHH
Confidence 2234444 553322 3578999999987766621 2334455555
Q ss_pred HH--hhccCceEEEEeeccCC
Q 017514 205 SE--ELVAEGRMVLTFLGRKS 223 (370)
Q Consensus 205 a~--EL~~GG~lvl~~~g~~~ 223 (370)
.+ -|+|||++++....+..
T Consensus 138 ~~~~~L~pgG~l~~~~~~~~~ 158 (189)
T 3p9n_A 138 GTNGWTREGTVAVVERATTCA 158 (189)
T ss_dssp HHSSSCCTTCEEEEEEETTSC
T ss_pred HhcCccCCCeEEEEEecCCCC
Confidence 55 89999999998876554
|
| >3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00036 Score=66.59 Aligned_cols=158 Identities=20% Similarity=0.194 Sum_probs=87.3
Q ss_pred HHHHHHhhcccCCCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHH
Q 017514 36 TEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKI 115 (370)
Q Consensus 36 l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~ 115 (370)
|++++..+.. .....+|+|+|||+|..|..++ +. +.-+|+--|+-.+= |. ..
T Consensus 73 l~~~l~~~~~--~~~g~~vLDiGcGTG~~t~~L~--------~~--------ga~~V~aVDvs~~m-------L~---~a 124 (291)
T 3hp7_A 73 LEKALAVFNL--SVEDMITIDIGASTGGFTDVML--------QN--------GAKLVYAVDVGTNQ-------LV---WK 124 (291)
T ss_dssp HHHHHHHTTC--CCTTCEEEEETCTTSHHHHHHH--------HT--------TCSEEEEECSSSSC-------SC---HH
T ss_pred HHHHHHhcCC--CccccEEEecCCCccHHHHHHH--------hC--------CCCEEEEEECCHHH-------HH---HH
Confidence 3455554432 2344799999999999998666 22 22578888875321 10 01
Q ss_pred HHHhhCCCCCCCCceEEeecCCCc-c--cccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHH
Q 017514 116 LRKQLGSASGAAGQCFFTGVPGSF-Y--GRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQ 192 (370)
Q Consensus 116 ~~~~~~~~~~~~~~~f~~~vpgSF-y--~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q 192 (370)
..+ . ..+-... ...+ | ..-+|..++|++++..++|||.+
T Consensus 125 ~r~--~------~rv~~~~-~~ni~~l~~~~l~~~~fD~v~~d~sf~sl~~----------------------------- 166 (291)
T 3hp7_A 125 LRQ--D------DRVRSME-QYNFRYAEPVDFTEGLPSFASIDVSFISLNL----------------------------- 166 (291)
T ss_dssp HHT--C------TTEEEEC-SCCGGGCCGGGCTTCCCSEEEECCSSSCGGG-----------------------------
T ss_pred HHh--C------cccceec-ccCceecchhhCCCCCCCEEEEEeeHhhHHH-----------------------------
Confidence 111 1 1111110 0111 0 11246678999999999998733
Q ss_pred HHHHHHHHHHHHHHhhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHH
Q 017514 193 FQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIK 272 (370)
Q Consensus 193 ~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~ 272 (370)
+|..=++-|+|||++++.+--.-+.++ + -++ +.|.+... -.+..+.+++.
T Consensus 167 -------vL~e~~rvLkpGG~lv~lvkPqfe~~~---~---~~~----------~~G~vrd~-------~~~~~~~~~v~ 216 (291)
T 3hp7_A 167 -------ILPALAKILVDGGQVVALVKPQFEAGR---E---QIG----------KNGIVRES-------SIHEKVLETVT 216 (291)
T ss_dssp -------THHHHHHHSCTTCEEEEEECGGGTSCG---G---GCC-----------CCCCCCH-------HHHHHHHHHHH
T ss_pred -------HHHHHHHHcCcCCEEEEEECcccccCh---h---hcC----------CCCccCCH-------HHHHHHHHHHH
Confidence 244447889999999997411000000 0 000 01332211 12345789999
Q ss_pred HHHHhcCceEEEEEEEEe
Q 017514 273 SEVIKEGSFTIDHLEVSE 290 (370)
Q Consensus 273 ~~ie~~GsF~i~~le~~~ 290 (370)
+.++..| |.+..+....
T Consensus 217 ~~~~~~G-f~v~~~~~sp 233 (291)
T 3hp7_A 217 AFAVDYG-FSVKGLDFSP 233 (291)
T ss_dssp HHHHHTT-EEEEEEEECS
T ss_pred HHHHHCC-CEEEEEEECC
Confidence 9999999 9888766543
|
| >1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3 | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00067 Score=60.98 Aligned_cols=34 Identities=21% Similarity=0.257 Sum_probs=24.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLP 98 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp 98 (370)
...+|+|+|||+|..|..+. +.. +.-+|+.-|+-
T Consensus 57 ~g~~VLDlGcGtG~~~~~la--------~~~-------~~~~V~gvD~s 90 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLA--------DIV-------DEGIIYAVEYS 90 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHH--------HHT-------TTSEEEEECCC
T ss_pred CCCEEEEECCcCCHHHHHHH--------HHc-------CCCEEEEEECC
Confidence 34699999999999887665 321 12578888875
|
| >1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.001 Score=57.00 Aligned_cols=99 Identities=18% Similarity=0.197 Sum_probs=58.9
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~ 126 (370)
...+|+|+|||+|..++.+. +. - .+|+..|.- +.......+ ..+...
T Consensus 33 ~~~~vldiG~G~G~~~~~l~--------~~--------~-~~v~~~D~~-----------~~~~~~a~~~~~~~~~~~-- 82 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLELA--------GR--------V-RRVYAIDRN-----------PEAISTTEMNLQRHGLGD-- 82 (192)
T ss_dssp TTCEEEEESCTTSHHHHHHH--------TT--------S-SEEEEEESC-----------HHHHHHHHHHHHHTTCCT--
T ss_pred CCCEEEEECCCCCHHHHHHH--------Hh--------c-CEEEEEECC-----------HHHHHHHHHHHHHcCCCc--
Confidence 34699999999999887665 21 1 467777763 221111111 112100
Q ss_pred CCceEEeecCCCcccccCCC-CceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPR-NSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRS 205 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~-~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra 205 (370)
+-.+.. +++.. .+|. +++|++++...+|++ ..+|+.-.
T Consensus 83 -~~~~~~---~d~~~-~~~~~~~~D~v~~~~~~~~~------------------------------------~~~l~~~~ 121 (192)
T 1l3i_A 83 -NVTLME---GDAPE-ALCKIPDIDIAVVGGSGGEL------------------------------------QEILRIIK 121 (192)
T ss_dssp -TEEEEE---SCHHH-HHTTSCCEEEEEESCCTTCH------------------------------------HHHHHHHH
T ss_pred -ceEEEe---cCHHH-hcccCCCCCEEEECCchHHH------------------------------------HHHHHHHH
Confidence 123333 35544 3444 689999987655331 23677778
Q ss_pred HhhccCceEEEEee
Q 017514 206 EELVAEGRMVLTFL 219 (370)
Q Consensus 206 ~EL~~GG~lvl~~~ 219 (370)
+-|+|||++++...
T Consensus 122 ~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 122 DKLKPGGRIIVTAI 135 (192)
T ss_dssp HTEEEEEEEEEEEC
T ss_pred HhcCCCcEEEEEec
Confidence 88999999999765
|
| >1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33 | Back alignment and structure |
|---|
Probab=97.40 E-value=0.0011 Score=61.02 Aligned_cols=98 Identities=21% Similarity=0.229 Sum_probs=61.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
...+|+|+|||+|..+..+. +.. |..+|+.-|.- +.......+. .. +-
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~--------~~~-------~~~~v~~vD~s-----------~~~~~~a~~~-~~-----~~ 132 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFA--------DAL-------PEITTFGLDVS-----------KVAIKAAAKR-YP-----QV 132 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHH--------HTC-------TTSEEEEEESC-----------HHHHHHHHHH-CT-----TS
T ss_pred CCCEEEEECCCCCHHHHHHH--------HhC-------CCCeEEEEeCC-----------HHHHHHHHHh-CC-----Cc
Confidence 45799999999999988665 221 23578888875 3322222221 21 22
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
.|..+ ++..--++++++|++++..+ |. +|+.-.+-|+
T Consensus 133 ~~~~~---d~~~~~~~~~~fD~v~~~~~-------~~---------------------------------~l~~~~~~L~ 169 (269)
T 1p91_A 133 TFCVA---SSHRLPFSDTSMDAIIRIYA-------PC---------------------------------KAEELARVVK 169 (269)
T ss_dssp EEEEC---CTTSCSBCTTCEEEEEEESC-------CC---------------------------------CHHHHHHHEE
T ss_pred EEEEc---chhhCCCCCCceeEEEEeCC-------hh---------------------------------hHHHHHHhcC
Confidence 44444 44332357889999998644 21 1333467799
Q ss_pred cCceEEEEeeccC
Q 017514 210 AEGRMVLTFLGRK 222 (370)
Q Consensus 210 ~GG~lvl~~~g~~ 222 (370)
|||++++..++.+
T Consensus 170 pgG~l~~~~~~~~ 182 (269)
T 1p91_A 170 PGGWVITATPGPR 182 (269)
T ss_dssp EEEEEEEEEECTT
T ss_pred CCcEEEEEEcCHH
Confidence 9999999987654
|
| >1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A* | Back alignment and structure |
|---|
Probab=97.39 E-value=0.0011 Score=62.47 Aligned_cols=40 Identities=8% Similarity=0.083 Sum_probs=31.3
Q ss_pred CCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEE
Q 017514 146 RNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVL 216 (370)
Q Consensus 146 ~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl 216 (370)
.+++|+++|.+.|+|+.. + +....|+.=++-|+|||.|++
T Consensus 211 ~~~fDlI~crnvliyf~~-~------------------------------~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 211 PGPFDAIFCRNVMIYFDK-T------------------------------TQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp CCCEEEEEECSSGGGSCH-H------------------------------HHHHHHHHHGGGEEEEEEEEE
T ss_pred CCCeeEEEECCchHhCCH-H------------------------------HHHHHHHHHHHHhCCCcEEEE
Confidence 578999999999999743 1 123466777899999999986
|
| >1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20 | Back alignment and structure |
|---|
Probab=97.36 E-value=0.0027 Score=57.59 Aligned_cols=98 Identities=18% Similarity=0.156 Sum_probs=60.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~ 126 (370)
...+|+|+|||+|..++.+. .. .|..+|+.-|.- +.......+ ..+..
T Consensus 70 ~~~~vLDiG~G~G~~~~~la--------~~-------~~~~~v~~vD~s-----------~~~~~~a~~~~~~~~~~--- 120 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIK--------IC-------FPHLHVTIVDSL-----------NKRITFLEKLSEALQLE--- 120 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHH--------HH-------CTTCEEEEEESC-----------HHHHHHHHHHHHHHTCS---
T ss_pred CCCEEEEecCCCCHHHHHHH--------Hh-------CCCCEEEEEeCC-----------HHHHHHHHHHHHHcCCC---
Confidence 45799999999999988766 21 134788888875 322222211 11211
Q ss_pred CCceEEeecCCCcccccCC---CCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFP---RNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKC 203 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p---~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~ 203 (370)
+-.|+ -+++.+-.++ ++++|+++|.. ++ |+..+|+.
T Consensus 121 -~v~~~---~~d~~~~~~~~~~~~~fD~V~~~~-------~~------------------------------~~~~~l~~ 159 (240)
T 1xdz_A 121 -NTTFC---HDRAETFGQRKDVRESYDIVTARA-------VA------------------------------RLSVLSEL 159 (240)
T ss_dssp -SEEEE---ESCHHHHTTCTTTTTCEEEEEEEC-------CS------------------------------CHHHHHHH
T ss_pred -CEEEE---eccHHHhcccccccCCccEEEEec-------cC------------------------------CHHHHHHH
Confidence 11333 3355332222 57999999844 11 23347777
Q ss_pred HHHhhccCceEEEE
Q 017514 204 RSEELVAEGRMVLT 217 (370)
Q Consensus 204 Ra~EL~~GG~lvl~ 217 (370)
-.+-|+|||++++.
T Consensus 160 ~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 160 CLPLVKKNGLFVAL 173 (240)
T ss_dssp HGGGEEEEEEEEEE
T ss_pred HHHhcCCCCEEEEE
Confidence 78999999999886
|
| >3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00013 Score=65.86 Aligned_cols=97 Identities=15% Similarity=0.084 Sum_probs=60.2
Q ss_pred HHHHHHHHHhhcccCCCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHH
Q 017514 33 KPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASF 112 (370)
Q Consensus 33 ~~~l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~ 112 (370)
+|.+++--.....- .+.+-+|+|+|||.|+.++.++ . ..|..+|...|.- +..
T Consensus 33 Lp~ld~fY~~~~~~-l~~~~~VLDlGCG~GplAl~l~--------~-------~~p~a~~~A~Di~-----------~~~ 85 (200)
T 3fzg_A 33 VATLNDFYTYVFGN-IKHVSSILDFGCGFNPLALYQW--------N-------ENEKIIYHAYDID-----------RAE 85 (200)
T ss_dssp GGGHHHHHHHHHHH-SCCCSEEEEETCTTHHHHHHHH--------C-------SSCCCEEEEECSC-----------HHH
T ss_pred hHhHHHHHHHHHhh-cCCCCeEEEecCCCCHHHHHHH--------h-------cCCCCEEEEEeCC-----------HHH
Confidence 35555543332111 2447899999999999999776 1 2366799999986 433
Q ss_pred HHHHHHh---hCCCCCCCCceEEeecCCCcccccCCCCceeEEEeccccccccCCC
Q 017514 113 QKILRKQ---LGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVP 165 (370)
Q Consensus 113 ~~~~~~~---~~~~~~~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P 165 (370)
-+..... .|.. .++-+ + +.-. ..|+.+.|++.++..||-|.+.+
T Consensus 86 leiar~~~~~~g~~----~~v~~-~---d~~~-~~~~~~~DvVLa~k~LHlL~~~~ 132 (200)
T 3fzg_A 86 IAFLSSIIGKLKTT----IKYRF-L---NKES-DVYKGTYDVVFLLKMLPVLKQQD 132 (200)
T ss_dssp HHHHHHHHHHSCCS----SEEEE-E---CCHH-HHTTSEEEEEEEETCHHHHHHTT
T ss_pred HHHHHHHHHhcCCC----ccEEE-e---cccc-cCCCCCcChhhHhhHHHhhhhhH
Confidence 3322221 1221 13333 2 4423 36889999999999999995533
|
| >3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00084 Score=58.61 Aligned_cols=115 Identities=18% Similarity=0.190 Sum_probs=66.2
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~~ 127 (370)
..+|+|+|||+|..++.+. +++ + |.-+|+.-|+- +......++ ..+...
T Consensus 23 ~~~vLDlGcG~G~~~~~l~--------~~~---~---~~~~v~~vD~s-----------~~~~~~a~~~~~~~~~~~--- 74 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLA--------SLV---G---ENGRVFGFDIQ-----------DKAIANTTKKLTDLNLID--- 74 (197)
T ss_dssp TCEEEESCCTTSHHHHHHH--------HHH---C---TTCEEEEECSC-----------HHHHHHHHHHHHHTTCGG---
T ss_pred CCEEEEcCCCCCHHHHHHH--------HHh---C---CCCEEEEEECC-----------HHHHHHHHHHHHHcCCCC---
Confidence 4699999999999888766 332 1 33588888875 222211111 111100
Q ss_pred CceEEeecCCCccccc-CCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 128 GQCFFTGVPGSFYGRL-FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l-~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
+-.|+. +++..-. ++++++|++++...+ +|..- ..+. ..+ +|...+|+.-.+
T Consensus 75 ~v~~~~---~d~~~~~~~~~~~fD~v~~~~~~-----~~~~~----~~~~----~~~-----------~~~~~~l~~~~~ 127 (197)
T 3eey_A 75 RVTLIK---DGHQNMDKYIDCPVKAVMFNLGY-----LPSGD----HSIS----TRP-----------ETTIQALSKAME 127 (197)
T ss_dssp GEEEEC---SCGGGGGGTCCSCEEEEEEEESB-----CTTSC----TTCB----CCH-----------HHHHHHHHHHHH
T ss_pred CeEEEE---CCHHHHhhhccCCceEEEEcCCc-----ccCcc----cccc----cCc-----------ccHHHHHHHHHH
Confidence 123433 3652222 567899999988665 23210 0010 011 244457888889
Q ss_pred hhccCceEEEEeec
Q 017514 207 ELVAEGRMVLTFLG 220 (370)
Q Consensus 207 EL~~GG~lvl~~~g 220 (370)
-|+|||++++....
T Consensus 128 ~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 128 LLVTGGIITVVIYY 141 (197)
T ss_dssp HEEEEEEEEEEECC
T ss_pred hCcCCCEEEEEEcc
Confidence 99999999998753
|
| >2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00081 Score=65.03 Aligned_cols=105 Identities=17% Similarity=0.228 Sum_probs=62.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
+.-+|+|+|||+|..++.+. +. +..+|+.-|.. .. .+.... ... ..+... +-
T Consensus 64 ~~~~VLDiGcGtG~ls~~la--------~~--------g~~~v~gvD~s--~~---~~~a~~---~~~-~~~~~~---~i 115 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAA--------KA--------GAKKVLGVDQS--EI---LYQAMD---IIR-LNKLED---TI 115 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HT--------TCSEEEEEESS--TH---HHHHHH---HHH-HTTCTT---TE
T ss_pred CCCEEEEeeccCcHHHHHHH--------Hc--------CCCEEEEEChH--HH---HHHHHH---HHH-HcCCCC---cE
Confidence 34699999999998877655 21 12578888874 22 222211 111 112110 22
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
.++.+ +..+--+|++++|+++|....+-+.. . .++..+|+.+.+-|+
T Consensus 116 ~~~~~---d~~~~~~~~~~~D~Ivs~~~~~~l~~-~-----------------------------~~~~~~l~~~~~~Lk 162 (340)
T 2fyt_A 116 TLIKG---KIEEVHLPVEKVDVIISEWMGYFLLF-E-----------------------------SMLDSVLYAKNKYLA 162 (340)
T ss_dssp EEEES---CTTTSCCSCSCEEEEEECCCBTTBTT-T-----------------------------CHHHHHHHHHHHHEE
T ss_pred EEEEe---eHHHhcCCCCcEEEEEEcCchhhccC-H-----------------------------HHHHHHHHHHHhhcC
Confidence 34333 55343467789999999752221111 0 244558999999999
Q ss_pred cCceEE
Q 017514 210 AEGRMV 215 (370)
Q Consensus 210 ~GG~lv 215 (370)
|||+++
T Consensus 163 pgG~li 168 (340)
T 2fyt_A 163 KGGSVY 168 (340)
T ss_dssp EEEEEE
T ss_pred CCcEEE
Confidence 999998
|
| >3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.0013 Score=58.81 Aligned_cols=121 Identities=11% Similarity=0.051 Sum_probs=64.8
Q ss_pred CceEEEeecCC-CCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCC
Q 017514 50 TKVAIADLGCS-SGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASG 125 (370)
Q Consensus 50 ~~~~IaD~Gcs-~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~ 125 (370)
...+|+|+||| +|..++.+. +.. ..+|+..|.- +.......+ ..+.
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la--------~~~--------~~~v~~vD~s-----------~~~~~~a~~~~~~~~~--- 104 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAE--------KFF--------NCKVTATEVD-----------EEFFEYARRNIERNNS--- 104 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHH--------HHH--------CCEEEEEECC-----------HHHHHHHHHHHHHTTC---
T ss_pred CCCEEEEcCCCHHHHHHHHHH--------Hhc--------CCEEEEEECC-----------HHHHHHHHHHHHHhCC---
Confidence 45799999999 999888665 221 2678888874 222221111 1121
Q ss_pred CCCceEEeecCCCcc-cccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017514 126 AAGQCFFTGVPGSFY-GRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCR 204 (370)
Q Consensus 126 ~~~~~f~~~vpgSFy-~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~R 204 (370)
+-.+..+ +.. -.-+|++++|+++++-.++|..... +......+ ..... . ..+...||+.-
T Consensus 105 --~v~~~~~---d~~~~~~~~~~~fD~I~~npp~~~~~~~~--~~~~~~~~-~~~~~--~---------~~~~~~~l~~~ 165 (230)
T 3evz_A 105 --NVRLVKS---NGGIIKGVVEGTFDVIFSAPPYYDKPLGR--VLTEREAI-GGGKY--G---------EEFSVKLLEEA 165 (230)
T ss_dssp --CCEEEEC---SSCSSTTTCCSCEEEEEECCCCC------------------CCSS--S---------CHHHHHHHHHH
T ss_pred --CcEEEeC---CchhhhhcccCceeEEEECCCCcCCcccc--ccChhhhh-ccCcc--c---------hHHHHHHHHHH
Confidence 1234333 421 1224568999999998887755411 00000000 00000 0 02235588888
Q ss_pred HHhhccCceEEEEee
Q 017514 205 SEELVAEGRMVLTFL 219 (370)
Q Consensus 205 a~EL~~GG~lvl~~~ 219 (370)
.+-|+|||++++.+.
T Consensus 166 ~~~LkpgG~l~~~~~ 180 (230)
T 3evz_A 166 FDHLNPGGKVALYLP 180 (230)
T ss_dssp GGGEEEEEEEEEEEE
T ss_pred HHHhCCCeEEEEEec
Confidence 889999999999864
|
| >1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0021 Score=58.61 Aligned_cols=49 Identities=10% Similarity=0.104 Sum_probs=31.7
Q ss_pred CCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEE
Q 017514 145 PRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLT 217 (370)
Q Consensus 145 p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~ 217 (370)
+.+++|+++|+..++-....+.. .. ..+...||+.=++-|+|||+++++
T Consensus 165 ~~~~fD~Iv~npp~~~~~~~~~~-------------~~-----------~~~~~~~l~~~~~~LkpgG~l~~~ 213 (250)
T 1o9g_A 165 AGSAPDVVLTDLPYGERTHWEGQ-------------VP-----------GQPVAGLLRSLASALPAHAVIAVT 213 (250)
T ss_dssp TTCCCSEEEEECCGGGSSSSSSC-------------CC-----------HHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred CCCCceEEEeCCCeecccccccc-------------cc-----------ccHHHHHHHHHHHhcCCCcEEEEe
Confidence 44589999998655543332210 00 134455777778889999999983
|
| >4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00088 Score=66.14 Aligned_cols=103 Identities=17% Similarity=0.211 Sum_probs=58.9
Q ss_pred eEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCceE
Q 017514 52 VAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCF 131 (370)
Q Consensus 52 ~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~f 131 (370)
-+|+|+|||+|..|+... +. | . -.|+.-|.. +.-...+.+ .+..+-.- +-.+
T Consensus 85 k~VLDvG~GtGiLs~~Aa--------~a----G---A-~~V~ave~s--~~~~~a~~~-------~~~n~~~~---~i~~ 136 (376)
T 4hc4_A 85 KTVLDVGAGTGILSIFCA--------QA----G---A-RRVYAVEAS--AIWQQAREV-------VRFNGLED---RVHV 136 (376)
T ss_dssp CEEEEETCTTSHHHHHHH--------HT----T---C-SEEEEEECS--TTHHHHHHH-------HHHTTCTT---TEEE
T ss_pred CEEEEeCCCccHHHHHHH--------Hh----C---C-CEEEEEeCh--HHHHHHHHH-------HHHcCCCc---eEEE
Confidence 479999999998877655 22 3 2 467777752 222222211 12223210 1233
Q ss_pred EeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 017514 132 FTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAE 211 (370)
Q Consensus 132 ~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~G 211 (370)
+. |.. +.+-.+..+|+++|- |+...-.. +..+..+|.+|.+=|+||
T Consensus 137 i~---~~~-~~~~lpe~~DvivsE----~~~~~l~~--------------------------e~~l~~~l~a~~r~Lkp~ 182 (376)
T 4hc4_A 137 LP---GPV-ETVELPEQVDAIVSE----WMGYGLLH--------------------------ESMLSSVLHARTKWLKEG 182 (376)
T ss_dssp EE---SCT-TTCCCSSCEEEEECC----CCBTTBTT--------------------------TCSHHHHHHHHHHHEEEE
T ss_pred Ee---eee-eeecCCccccEEEee----cccccccc--------------------------cchhhhHHHHHHhhCCCC
Confidence 33 344 445556889999994 33221110 023445899999999999
Q ss_pred ceEEE
Q 017514 212 GRMVL 216 (370)
Q Consensus 212 G~lvl 216 (370)
|+|+-
T Consensus 183 G~~iP 187 (376)
T 4hc4_A 183 GLLLP 187 (376)
T ss_dssp EEEES
T ss_pred ceECC
Confidence 99873
|
| >2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0025 Score=55.36 Aligned_cols=116 Identities=15% Similarity=0.138 Sum_probs=66.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhc--CCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKL--GSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAA 127 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~--~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~ 127 (370)
...+|+|+|||+|..++.+. +++... ....|..+|+..|+...- .+ .
T Consensus 22 ~~~~vLDlGcG~G~~~~~la--------~~~~~~~~~~~~~~~~v~~vD~s~~~------~~------------~----- 70 (196)
T 2nyu_A 22 PGLRVLDCGAAPGAWSQVAV--------QKVNAAGTDPSSPVGFVLGVDLLHIF------PL------------E----- 70 (196)
T ss_dssp TTCEEEEETCCSCHHHHHHH--------HHTTTTCCCTTSCCCEEEEECSSCCC------CC------------T-----
T ss_pred CCCEEEEeCCCCCHHHHHHH--------HHhccccccccCCCceEEEEechhcc------cC------------C-----
Confidence 35799999999999888766 332100 001123678888875310 00 0
Q ss_pred CceEEeecCCCcccc--------cCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHH
Q 017514 128 GQCFFTGVPGSFYGR--------LFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSL 199 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~--------l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~ 199 (370)
.-.+. ..+++... .+|++++|+++|..++||.-.- ....+ ........
T Consensus 71 ~~~~~--~~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~--------------------~~~~~--~~~~~~~~ 126 (196)
T 2nyu_A 71 GATFL--CPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFR--------------------DLDHD--RLISLCLT 126 (196)
T ss_dssp TCEEE--CSCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCH--------------------HHHHH--HHHHHHHH
T ss_pred CCeEE--EeccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCc--------------------ccCHH--HHHHHHHH
Confidence 11232 02344321 2566799999998777663210 00000 11123346
Q ss_pred HHHHHHHhhccCceEEEEeec
Q 017514 200 FLKCRSEELVAEGRMVLTFLG 220 (370)
Q Consensus 200 fL~~Ra~EL~~GG~lvl~~~g 220 (370)
+|+.-.+-|+|||+|++....
T Consensus 127 ~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 127 LLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp HHHHHHHHEEEEEEEEEEECC
T ss_pred HHHHHHHHhcCCCEEEEEecC
Confidence 777778899999999998753
|
| >1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7 | Back alignment and structure |
|---|
Probab=97.29 E-value=0.0016 Score=58.24 Aligned_cols=98 Identities=16% Similarity=0.037 Sum_probs=60.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
...+|+|+|||+|..+..+. +. + .+|+.-|.- +.......+.... .+ +-
T Consensus 70 ~~~~vLdiG~G~G~~~~~l~--------~~----~-----~~v~~vD~~-----------~~~~~~a~~~~~~-~~--~v 118 (231)
T 1vbf_A 70 KGQKVLEIGTGIGYYTALIA--------EI----V-----DKVVSVEIN-----------EKMYNYASKLLSY-YN--NI 118 (231)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------HH----S-----SEEEEEESC-----------HHHHHHHHHHHTT-CS--SE
T ss_pred CCCEEEEEcCCCCHHHHHHH--------HH----c-----CEEEEEeCC-----------HHHHHHHHHHHhh-cC--Ce
Confidence 34699999999999988665 22 1 356666764 3322222222111 00 11
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
.|.. +++...+.+++++|++++..++|++.+ + -.+-|+
T Consensus 119 ~~~~---~d~~~~~~~~~~fD~v~~~~~~~~~~~--------------------~-------------------~~~~L~ 156 (231)
T 1vbf_A 119 KLIL---GDGTLGYEEEKPYDRVVVWATAPTLLC--------------------K-------------------PYEQLK 156 (231)
T ss_dssp EEEE---SCGGGCCGGGCCEEEEEESSBBSSCCH--------------------H-------------------HHHTEE
T ss_pred EEEE---CCcccccccCCCccEEEECCcHHHHHH--------------------H-------------------HHHHcC
Confidence 3333 366454445789999999999987421 1 145799
Q ss_pred cCceEEEEeec
Q 017514 210 AEGRMVLTFLG 220 (370)
Q Consensus 210 ~GG~lvl~~~g 220 (370)
|||++++....
T Consensus 157 pgG~l~~~~~~ 167 (231)
T 1vbf_A 157 EGGIMILPIGV 167 (231)
T ss_dssp EEEEEEEEECS
T ss_pred CCcEEEEEEcC
Confidence 99999999754
|
| >3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E* | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00024 Score=65.53 Aligned_cols=61 Identities=13% Similarity=0.063 Sum_probs=38.4
Q ss_pred hhHhhhHHHHHHHHHhHHHHHHHHHhhcccCCCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCC
Q 017514 17 SYASNSLVQEKVISIAKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLND 96 (370)
Q Consensus 17 sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nD 96 (370)
.|......|.+....++..| ..+. ...-.+|+|+|||+|..|..+. +.. + |.-+|+--|
T Consensus 50 ~yr~w~~~~skla~~ll~~l----~~~~---l~~g~~VLDlG~GtG~~t~~la--------~~v---~---~~G~V~avD 108 (232)
T 3id6_C 50 EYREWNAFRSKLAGAILKGL----KTNP---IRKGTKVLYLGAASGTTISHVS--------DII---E---LNGKAYGVE 108 (232)
T ss_dssp EEEECCTTTCHHHHHHHTTC----SCCS---CCTTCEEEEETCTTSHHHHHHH--------HHH---T---TTSEEEEEE
T ss_pred chhhhchHHHHHHHHHHhhh----hhcC---CCCCCEEEEEeecCCHHHHHHH--------HHh---C---CCCEEEEEE
Confidence 47777777777665443322 1111 1234899999999999887665 221 1 346888888
Q ss_pred CC
Q 017514 97 LP 98 (370)
Q Consensus 97 lp 98 (370)
+-
T Consensus 109 ~s 110 (232)
T 3id6_C 109 FS 110 (232)
T ss_dssp CC
T ss_pred Cc
Confidence 74
|
| >1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20 | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00092 Score=58.76 Aligned_cols=97 Identities=14% Similarity=0.096 Sum_probs=60.5
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~~ 127 (370)
..+|+|+|||+|..++.+. +.+ |..+++..|.. +.......+ ..+.
T Consensus 66 ~~~vLDiG~G~G~~~~~l~--------~~~-------~~~~v~~vD~s-----------~~~~~~a~~~~~~~~~----- 114 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLS--------IVR-------PEAHFTLLDSL-----------GKRVRFLRQVQHELKL----- 114 (207)
T ss_dssp SSEEEEETCTTTTTHHHHH--------HHC-------TTSEEEEEESC-----------HHHHHHHHHHHHHTTC-----
T ss_pred CCeEEEECCCCCHHHHHHH--------HHC-------CCCEEEEEeCC-----------HHHHHHHHHHHHHcCC-----
Confidence 4699999999999988766 321 34788888875 322222211 1121
Q ss_pred CceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017514 128 GQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~E 207 (370)
.++ ..+.+++. .+.|++++|++++.. + .++..+|+.-.+-
T Consensus 115 ~~v--~~~~~d~~-~~~~~~~~D~i~~~~-~------------------------------------~~~~~~l~~~~~~ 154 (207)
T 1jsx_A 115 ENI--EPVQSRVE-EFPSEPPFDGVISRA-F------------------------------------ASLNDMVSWCHHL 154 (207)
T ss_dssp SSE--EEEECCTT-TSCCCSCEEEEECSC-S------------------------------------SSHHHHHHHHTTS
T ss_pred CCe--EEEecchh-hCCccCCcCEEEEec-c------------------------------------CCHHHHHHHHHHh
Confidence 121 22334653 344678999999742 0 1223477777889
Q ss_pred hccCceEEEEe
Q 017514 208 LVAEGRMVLTF 218 (370)
Q Consensus 208 L~~GG~lvl~~ 218 (370)
|+|||++++..
T Consensus 155 L~~gG~l~~~~ 165 (207)
T 1jsx_A 155 PGEQGRFYALK 165 (207)
T ss_dssp EEEEEEEEEEE
T ss_pred cCCCcEEEEEe
Confidence 99999999973
|
| >3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0033 Score=67.85 Aligned_cols=112 Identities=12% Similarity=0.086 Sum_probs=69.9
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH----hhC-CCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK----QLG-SAS 124 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~----~~~-~~~ 124 (370)
...+|+|+|||+|..++.+. +. .+|..+|+--|+- +.......+ ... ...
T Consensus 721 ~g~rVLDVGCGTG~lai~LA--------r~------g~p~a~VtGVDIS-----------~emLe~AReRLa~~lnAkr~ 775 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLL--------DY------PTSLQTIIGVDIS-----------PKGLARAAKMLHVKLNKEAC 775 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHT--------SS------CCCCCEEEEEESC-----------HHHHHHHHHHHHHHTTTTCS
T ss_pred CCCEEEEECCCCCHHHHHHH--------Hh------CCCCCeEEEEECC-----------HHHHHHHHHHhhhccchhhc
Confidence 35799999999999987665 21 1233688888985 322222111 100 000
Q ss_pred CCCCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017514 125 GAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCR 204 (370)
Q Consensus 125 ~~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~R 204 (370)
+..+-.|..| +...--++.+++|++++..++||+.. | +...||+.-
T Consensus 776 gl~nVefiqG---Da~dLp~~d~sFDlVV~~eVLeHL~d-p------------------------------~l~~~L~eI 821 (950)
T 3htx_A 776 NVKSATLYDG---SILEFDSRLHDVDIGTCLEVIEHMEE-D------------------------------QACEFGEKV 821 (950)
T ss_dssp SCSEEEEEES---CTTSCCTTSCSCCEEEEESCGGGSCH-H------------------------------HHHHHHHHH
T ss_pred CCCceEEEEC---chHhCCcccCCeeEEEEeCchhhCCh-H------------------------------HHHHHHHHH
Confidence 0012244443 66555557799999999999999643 1 223467777
Q ss_pred HHhhccCceEEEEeecc
Q 017514 205 SEELVAEGRMVLTFLGR 221 (370)
Q Consensus 205 a~EL~~GG~lvl~~~g~ 221 (370)
.+-|+|| .+++..+.+
T Consensus 822 ~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 822 LSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp HHTTCCS-EEEEEECBG
T ss_pred HHHcCCC-EEEEEecCc
Confidence 8999999 777777644
|
| >3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A* | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0027 Score=60.32 Aligned_cols=109 Identities=14% Similarity=0.045 Sum_probs=61.1
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhh------CC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL------GS 122 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~------~~ 122 (370)
+++.+|+|+|||+|..+..++ +. .+..+|+.-|+- +...+..++.. ..
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~--------~~-------~~~~~v~~vDid-----------~~~i~~a~~~~~~~~~~~~ 147 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVL--------RH-------GTVEHCDLVDID-----------GEVMEQSKQHFPQISRSLA 147 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHH--------TC-------TTCCEEEEEESC-----------HHHHHHHHHHCHHHHGGGG
T ss_pred CCCCeEEEEcCCCCHHHHHHH--------hC-------CCCCEEEEEECC-----------HHHHHHHHHHhHHhhcccC
Confidence 456799999999999887665 21 134678888874 22211111110 01
Q ss_pred CCCCCCceEEeecCCCcccccC--CCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHH
Q 017514 123 ASGAAGQCFFTGVPGSFYGRLF--PRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLF 200 (370)
Q Consensus 123 ~~~~~~~~f~~~vpgSFy~~l~--p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~f 200 (370)
+. +-.++.+ +...-+. +++++|++++....++. |.. ..+ . ..|
T Consensus 148 ~~---~v~~~~~---D~~~~~~~~~~~~fDvIi~d~~~~~~---~~~------~l~-----~---------------~~~ 192 (304)
T 3bwc_A 148 DP---RATVRVG---DGLAFVRQTPDNTYDVVIIDTTDPAG---PAS------KLF-----G---------------EAF 192 (304)
T ss_dssp CT---TEEEEES---CHHHHHHSSCTTCEEEEEEECC------------------C-----C---------------HHH
T ss_pred CC---cEEEEEC---cHHHHHHhccCCceeEEEECCCCccc---cch------hhh-----H---------------HHH
Confidence 10 2234333 5533333 57899999997766551 210 000 0 236
Q ss_pred HHHHHHhhccCceEEEEe
Q 017514 201 LKCRSEELVAEGRMVLTF 218 (370)
Q Consensus 201 L~~Ra~EL~~GG~lvl~~ 218 (370)
|+.-.+-|+|||+|++..
T Consensus 193 l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 193 YKDVLRILKPDGICCNQG 210 (304)
T ss_dssp HHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHhcCCCcEEEEec
Confidence 777788899999999985
|
| >3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A* | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0011 Score=65.99 Aligned_cols=126 Identities=12% Similarity=0.034 Sum_probs=76.1
Q ss_pred CceEEEeecCC------CCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCC
Q 017514 50 TKVAIADLGCS------SGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSA 123 (370)
Q Consensus 50 ~~~~IaD~Gcs------~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~ 123 (370)
++.+|+|+||| +|..|+.++ +++. |..+|+--|+-.+= . ....
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la--------~~~f------P~a~V~GVDiSp~m-------~---------~~~~- 264 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMW--------KSFF------PRGQIYGLDIMDKS-------H---------VDEL- 264 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHH--------HHHC------TTCEEEEEESSCCG-------G---------GCBT-
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHH--------HHhC------CCCEEEEEECCHHH-------h---------hcCC-
Confidence 46899999999 788888666 3321 45788888885431 0 0011
Q ss_pred CCCCCceEEeecCCCcccccCC------CCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHH
Q 017514 124 SGAAGQCFFTGVPGSFYGRLFP------RNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDF 197 (370)
Q Consensus 124 ~~~~~~~f~~~vpgSFy~~l~p------~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~ 197 (370)
+-.|..| +...-=|+ ++++|+++|..+ ||. .|+
T Consensus 265 ----rI~fv~G---Da~dlpf~~~l~~~d~sFDlVisdgs-H~~---------------------------------~d~ 303 (419)
T 3sso_A 265 ----RIRTIQG---DQNDAEFLDRIARRYGPFDIVIDDGS-HIN---------------------------------AHV 303 (419)
T ss_dssp ----TEEEEEC---CTTCHHHHHHHHHHHCCEEEEEECSC-CCH---------------------------------HHH
T ss_pred ----CcEEEEe---cccccchhhhhhcccCCccEEEECCc-ccc---------------------------------hhH
Confidence 2345555 54322233 689999999765 542 123
Q ss_pred HHHHHHHHHhhccCceEEEEeeccCCC----CCCC--chhhhHHHHHHHHHHHHHh
Q 017514 198 SLFLKCRSEELVAEGRMVLTFLGRKSQ----DPSS--KECCYIWELLATALNNMVS 247 (370)
Q Consensus 198 ~~fL~~Ra~EL~~GG~lvl~~~g~~~~----~~~~--~~~~~~~~~l~~al~~mv~ 247 (370)
..+|+.-.+-|+|||++++.-+-..-. +... .....+.+.++..+..+-.
T Consensus 304 ~~aL~el~rvLKPGGvlVi~Dl~tsy~p~f~G~~~~~~~~~tii~~lk~l~D~l~~ 359 (419)
T 3sso_A 304 RTSFAALFPHVRPGGLYVIEDMWTAYWPGFGGQADPQECSGTSLGLLKSLIDAIQH 359 (419)
T ss_dssp HHHHHHHGGGEEEEEEEEEECGGGGGCTBTTCCSSTTCCTTSHHHHHHHHHHHHTG
T ss_pred HHHHHHHHHhcCCCeEEEEEecccccCcccCCCccCCcchhHHHHHHHHHHHHhcc
Confidence 346777789999999999975542111 1100 1113467777777776643
|
| >4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00027 Score=61.92 Aligned_cols=130 Identities=14% Similarity=0.099 Sum_probs=62.7
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (370)
....+|+|+|||+|..++.+. +.. |..+++.-|+- +.......+.... .
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~--------~~~-------~~~~v~~vD~~-----------~~~~~~a~~~~~~-----~ 77 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIA--------LAC-------PGVSVTAVDLS-----------MDALAVARRNAER-----F 77 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHH--------HHC-------TTEEEEEEECC------------------------------
T ss_pred CCCCEEEEecCCHhHHHHHHH--------HhC-------CCCeEEEEECC-----------HHHHHHHHHHHHH-----h
Confidence 456899999999999888766 321 34678888874 2211111110000 0
Q ss_pred ceEEeecCCCcccccCCC-----CceeEEEeccccccccCC---CCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHH
Q 017514 129 QCFFTGVPGSFYGRLFPR-----NSVHLFHSSYSLQWLSQV---PDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLF 200 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~-----~sv~~~~S~~alhWls~~---P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~f 200 (370)
..-+.-+-+++.+ .+++ +++|+++++-.+|+.... +..+........... .......+..|
T Consensus 78 ~~~~~~~~~d~~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~ 146 (215)
T 4dzr_A 78 GAVVDWAAADGIE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDG----------GEDGLQFYRRM 146 (215)
T ss_dssp -----CCHHHHHH-HHHHHHHTTCCBSEEEECCCCCC----------------------------------CTTHHHHHH
T ss_pred CCceEEEEcchHh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccC----------CCcHHHHHHHH
Confidence 0011123345544 4555 899999998766654432 211110000000000 00011234668
Q ss_pred HHHHHHhhccCceEEEEeec
Q 017514 201 LKCRSEELVAEGRMVLTFLG 220 (370)
Q Consensus 201 L~~Ra~EL~~GG~lvl~~~g 220 (370)
|+.-.+-|+|||++++...+
T Consensus 147 l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 147 AALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp HTCCGGGBCSSSEEEEEECT
T ss_pred HHHHHHHhcCCCeEEEEEEC
Confidence 88888999999995544443
|
| >2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0031 Score=53.61 Aligned_cols=72 Identities=14% Similarity=0.161 Sum_probs=44.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~ 126 (370)
...+|+|+|||+|..++.+.. +..+++..|.- +...+...+ ..+..
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~~-----------------~~~~v~~vD~~-----------~~~~~~a~~~~~~~~~~--- 83 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIAK-----------------RCKFVYAIDYL-----------DGAIEVTKQNLAKFNIK--- 83 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHHT-----------------TSSEEEEEECS-----------HHHHHHHHHHHHHTTCC---
T ss_pred CCCEEEEeCCCCCHHHHHHHh-----------------cCCeEEEEeCC-----------HHHHHHHHHHHHHcCCC---
Confidence 346999999999998887661 23678888874 222221111 11211
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccc
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYS 157 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~a 157 (370)
+-.+. .+++.+ .+|++++|++++...
T Consensus 84 -~~~~~---~~d~~~-~~~~~~~D~i~~~~~ 109 (183)
T 2yxd_A 84 -NCQII---KGRAED-VLDKLEFNKAFIGGT 109 (183)
T ss_dssp -SEEEE---ESCHHH-HGGGCCCSEEEECSC
T ss_pred -cEEEE---ECCccc-cccCCCCcEEEECCc
Confidence 22333 346655 567789999998866
|
| >2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.21 E-value=0.001 Score=58.97 Aligned_cols=100 Identities=12% Similarity=0.128 Sum_probs=61.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~ 126 (370)
...+|+|+|||+|..+..+. +.. + |..+|+.-|.- +.......+ ..+..
T Consensus 77 ~~~~vLdiG~G~G~~~~~l~--------~~~---~---~~~~v~~vD~~-----------~~~~~~a~~~~~~~~~~--- 128 (215)
T 2yxe_A 77 PGMKVLEIGTGCGYHAAVTA--------EIV---G---EDGLVVSIERI-----------PELAEKAERTLRKLGYD--- 128 (215)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------HHH---C---TTSEEEEEESC-----------HHHHHHHHHHHHHHTCT---
T ss_pred CCCEEEEECCCccHHHHHHH--------HHh---C---CCCEEEEEeCC-----------HHHHHHHHHHHHHcCCC---
Confidence 34699999999999988666 322 1 33577777864 222111111 11211
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
.-.|.. +++...+.+.+++|++++..++|++. . . -.+
T Consensus 129 -~v~~~~---~d~~~~~~~~~~fD~v~~~~~~~~~~---~-----------------~-------------------~~~ 165 (215)
T 2yxe_A 129 -NVIVIV---GDGTLGYEPLAPYDRIYTTAAGPKIP---E-----------------P-------------------LIR 165 (215)
T ss_dssp -TEEEEE---SCGGGCCGGGCCEEEEEESSBBSSCC---H-----------------H-------------------HHH
T ss_pred -CeEEEE---CCcccCCCCCCCeeEEEECCchHHHH---H-----------------H-------------------HHH
Confidence 223333 35544333478999999999999743 1 1 156
Q ss_pred hhccCceEEEEeec
Q 017514 207 ELVAEGRMVLTFLG 220 (370)
Q Consensus 207 EL~~GG~lvl~~~g 220 (370)
-|+|||++++.+..
T Consensus 166 ~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 166 QLKDGGKLLMPVGR 179 (215)
T ss_dssp TEEEEEEEEEEESS
T ss_pred HcCCCcEEEEEECC
Confidence 79999999999854
|
| >2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A* | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0041 Score=57.72 Aligned_cols=122 Identities=14% Similarity=0.191 Sum_probs=70.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~ 126 (370)
...+|+|+|||+|..++.+. +.. |..+|+..|.- +.......+ ..+..
T Consensus 109 ~~~~vLDlG~GsG~~~~~la--------~~~-------~~~~v~~vD~s-----------~~~l~~a~~n~~~~~~~--- 159 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALA--------SER-------PDCEIIAVDRM-----------PDAVSLAQRNAQHLAIK--- 159 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHH--------HHC-------TTSEEEEECSS-----------HHHHHHHHHHHHHHTCC---
T ss_pred CCCEEEEecCCccHHHHHHH--------HhC-------CCCEEEEEECC-----------HHHHHHHHHHHHHcCCC---
Confidence 34699999999999888665 221 45788999974 222221111 11211
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccC--CCCCccCCC--ceeeecCCCCHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQ--VPDGLESNK--GNIFMASTSPPCVLTAYYEQFQRDFSLFLK 202 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~--~P~~~~~nk--~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~ 202 (370)
+-.| +-+++.. .+|++++|+++|+...+|... +++.+.... ..++ ..+ ..-.++..+|+
T Consensus 160 -~v~~---~~~d~~~-~~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~----~~~--------~g~~~~~~~l~ 222 (276)
T 2b3t_A 160 -NIHI---LQSDWFS-ALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALV----AAD--------SGMADIVHIIE 222 (276)
T ss_dssp -SEEE---ECCSTTG-GGTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTB----CHH--------HHTHHHHHHHH
T ss_pred -ceEE---EEcchhh-hcccCCccEEEECCCCCCccccccChhhhhcCcHHHHc----CCC--------cHHHHHHHHHH
Confidence 2233 3346654 356789999999977776543 001111000 0000 000 11135566888
Q ss_pred HHHHhhccCceEEEE
Q 017514 203 CRSEELVAEGRMVLT 217 (370)
Q Consensus 203 ~Ra~EL~~GG~lvl~ 217 (370)
.-.+-|+|||++++.
T Consensus 223 ~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 223 QSRNALVSGGFLLLE 237 (276)
T ss_dssp HHGGGEEEEEEEEEE
T ss_pred HHHHhcCCCCEEEEE
Confidence 888999999999997
|
| >3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A* | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00093 Score=60.76 Aligned_cols=68 Identities=19% Similarity=0.162 Sum_probs=39.2
Q ss_pred HHHHHHHHHhhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHh
Q 017514 198 SLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIK 277 (370)
Q Consensus 198 ~~fL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~ 277 (370)
..+|+.-++-|+|||+|++........ +.+...+. + . ....|.|++. +|+.+.+++
T Consensus 119 ~~~l~~~~r~LkpGG~l~i~~~~~~~~-----------~~~~~~~~-----~------~-~~~~~~~~~~-~el~~~l~~ 174 (225)
T 3p2e_A 119 RDILSNVADLAKKEAHFEFVTTYSDSY-----------EEAEIKKR-----G------L-PLLSKAYFLS-EQYKAELSN 174 (225)
T ss_dssp HHHHHHHHTTEEEEEEEEEEECCCC-------------------------------------CCHHHHHS-HHHHHHHHH
T ss_pred HHHHHHHHHhcCCCcEEEEEEeccccc-----------hhchhhhc-----C------C-CCCChhhcch-HHHHHHHHH
Confidence 346777788999999999954322211 10000000 1 0 0112333332 479999999
Q ss_pred cCceEEEEEEEEe
Q 017514 278 EGSFTIDHLEVSE 290 (370)
Q Consensus 278 ~GsF~i~~le~~~ 290 (370)
.| |+|...+.+.
T Consensus 175 aG-f~v~~~~~~~ 186 (225)
T 3p2e_A 175 SG-FRIDDVKELD 186 (225)
T ss_dssp HT-CEEEEEEEEC
T ss_pred cC-CCeeeeeecC
Confidence 99 9999999885
|
| >3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0023 Score=58.32 Aligned_cols=107 Identities=8% Similarity=-0.014 Sum_probs=58.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhC-CCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLG-SASGAAG 128 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~-~~~~~~~ 128 (370)
.-.+|+|+|||.|.++..+. +. .| -+++.-|+- |......++... ... .
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~--------~~-------~~-~~v~~id~~-----------~~~~~~a~~~~~~~~~---~ 109 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQ--------EA-------PI-DEHWIIECN-----------DGVFQRLRDWAPRQTH---K 109 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHT--------TS-------CE-EEEEEEECC-----------HHHHHHHHHHGGGCSS---E
T ss_pred CCCeEEEECCCccHHHHHHH--------Hh-------CC-cEEEEEeCC-----------HHHHHHHHHHHhhCCC---c
Confidence 34799999999998877554 21 24 356666764 333332222211 110 1
Q ss_pred ceEEeecCCCcc--cccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 129 QCFFTGVPGSFY--GRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 129 ~~f~~~vpgSFy--~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
..++.+ ... ..-+|++++|.++.-....... .. ...|...||+.-++
T Consensus 110 ~~~~~~---~a~~~~~~~~~~~FD~i~~D~~~~~~~--~~--------------------------~~~~~~~~~~e~~r 158 (236)
T 3orh_A 110 VIPLKG---LWEDVAPTLPDGHFDGILYDTYPLSEE--TW--------------------------HTHQFNFIKNHAFR 158 (236)
T ss_dssp EEEEES---CHHHHGGGSCTTCEEEEEECCCCCBGG--GT--------------------------TTHHHHHHHHTHHH
T ss_pred eEEEee---hHHhhcccccccCCceEEEeeeecccc--hh--------------------------hhcchhhhhhhhhh
Confidence 233333 332 2236889999986322111100 00 01355667888889
Q ss_pred hhccCceEEEE
Q 017514 207 ELVAEGRMVLT 217 (370)
Q Consensus 207 EL~~GG~lvl~ 217 (370)
-|||||+|++.
T Consensus 159 vLkPGG~l~f~ 169 (236)
T 3orh_A 159 LLKPGGVLTYC 169 (236)
T ss_dssp HEEEEEEEEEC
T ss_pred eeCCCCEEEEE
Confidence 99999998763
|
| >3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0022 Score=58.97 Aligned_cols=123 Identities=9% Similarity=0.059 Sum_probs=65.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~ 126 (370)
...+|+|+|||+|..++.+. ++ .+ -+|+.-|+- +.......+ ..+..
T Consensus 49 ~~~~vLDlG~G~G~~~~~la--------~~-------~~-~~v~gvDi~-----------~~~~~~a~~n~~~~~~~--- 98 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLS--------TR-------TK-AKIVGVEIQ-----------ERLADMAKRSVAYNQLE--- 98 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHH--------TT-------CC-CEEEEECCS-----------HHHHHHHHHHHHHTTCT---
T ss_pred CCCEEEEcCCchhHHHHHHH--------Hh-------cC-CcEEEEECC-----------HHHHHHHHHHHHHCCCc---
Confidence 45799999999999888665 22 13 388888884 222111111 11211
Q ss_pred CCceEEeecCCCccccc--CCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRL--FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCR 204 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l--~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~R 204 (370)
.+-.++. +++.+-. +|++++|+++|+-.++..+.. .+. ++....+.-......++..||+.-
T Consensus 99 ~~v~~~~---~D~~~~~~~~~~~~fD~Ii~npPy~~~~~~--~~~-----------~~~~~~~~a~~~~~~~~~~~l~~~ 162 (259)
T 3lpm_A 99 DQIEIIE---YDLKKITDLIPKERADIVTCNPPYFATPDT--SLK-----------NTNEHFRIARHEVMCTLEDTIRVA 162 (259)
T ss_dssp TTEEEEC---SCGGGGGGTSCTTCEEEEEECCCC------------------------------------HHHHHHHHHH
T ss_pred ccEEEEE---CcHHHhhhhhccCCccEEEECCCCCCCccc--cCC-----------CCchHHHhhhccccCCHHHHHHHH
Confidence 0123333 3553322 568999999997554432100 000 000000000111235678899999
Q ss_pred HHhhccCceEEEEe
Q 017514 205 SEELVAEGRMVLTF 218 (370)
Q Consensus 205 a~EL~~GG~lvl~~ 218 (370)
++-|+|||+|++..
T Consensus 163 ~~~LkpgG~l~~~~ 176 (259)
T 3lpm_A 163 ASLLKQGGKANFVH 176 (259)
T ss_dssp HHHEEEEEEEEEEE
T ss_pred HHHccCCcEEEEEE
Confidence 99999999999965
|
| >2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.002 Score=59.70 Aligned_cols=123 Identities=20% Similarity=0.195 Sum_probs=67.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhC----CCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLG----SASG 125 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~----~~~~ 125 (370)
...+|+|+|||+|..++.+. +++ |..+|+.-|+- +.......+... ...
T Consensus 36 ~~~~VLDlG~G~G~~~l~la--------~~~-------~~~~v~gvDi~-----------~~~~~~a~~n~~~~~~~~l- 88 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVA--------ARL-------EKAEVTLYERS-----------QEMAEFARRSLELPDNAAF- 88 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHH--------HHC-------TTEEEEEEESS-----------HHHHHHHHHHTTSGGGTTT-
T ss_pred CCCEEEEeCChHhHHHHHHH--------HhC-------CCCeEEEEECC-----------HHHHHHHHHHHHhhhhCCC-
Confidence 45799999999999888766 331 34788888874 332222222111 111
Q ss_pred CCC-ceEEeecCCCcccc-------cCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHH-HHHH
Q 017514 126 AAG-QCFFTGVPGSFYGR-------LFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQ-FQRD 196 (370)
Q Consensus 126 ~~~-~~f~~~vpgSFy~~-------l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q-~~~D 196 (370)
.. -.++. +++.+- .+|++++|+++++--+++..... . +...++.+.. ...+
T Consensus 89 -~~~v~~~~---~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~---~-------------~~~~~~~a~~~~~~~ 148 (260)
T 2ozv_A 89 -SARIEVLE---ADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRR---T-------------PDALKAEAHAMTEGL 148 (260)
T ss_dssp -GGGEEEEE---CCTTCCHHHHHHTTCCTTCEEEEEECCCC-------------------------------------CC
T ss_pred -cceEEEEe---CCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCC---C-------------cCHHHHHHhhcCcCC
Confidence 01 12333 365432 26789999999985555532100 0 0111111111 1234
Q ss_pred HHHHHHHHHHhhccCceEEEEee
Q 017514 197 FSLFLKCRSEELVAEGRMVLTFL 219 (370)
Q Consensus 197 ~~~fL~~Ra~EL~~GG~lvl~~~ 219 (370)
+..||+.-++-|+|||+|++...
T Consensus 149 ~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 149 FEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHcCCCCEEEEEEc
Confidence 77899999999999999999764
|
| >1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A* | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0023 Score=57.18 Aligned_cols=103 Identities=17% Similarity=0.105 Sum_probs=60.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCC---C
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGS---A 123 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~---~ 123 (370)
...+|+|+|||+|..+..+. +.+ + +..+|+..|.- +.......+ ..+. .
T Consensus 77 ~~~~vLDiG~G~G~~~~~la--------~~~---~---~~~~v~~vD~s-----------~~~~~~a~~~~~~~~~~~~~ 131 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFA--------RMV---G---CTGKVIGIDHI-----------KELVDDSVNNVRKDDPTLLS 131 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HHH---C---TTCEEEEEESC-----------HHHHHHHHHHHHHHCTHHHH
T ss_pred CCCEEEEEcCCcCHHHHHHH--------HHh---C---CCcEEEEEeCC-----------HHHHHHHHHHHHhhcccccC
Confidence 35799999999999988665 322 1 33578888874 222111111 1110 0
Q ss_pred CCCCCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017514 124 SGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKC 203 (370)
Q Consensus 124 ~~~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~ 203 (370)
. .+-.+..+ +......+.+++|++++...++.+ + +.
T Consensus 132 ~--~~v~~~~~---d~~~~~~~~~~fD~i~~~~~~~~~---~------------------------------------~~ 167 (226)
T 1i1n_A 132 S--GRVQLVVG---DGRMGYAEEAPYDAIHVGAAAPVV---P------------------------------------QA 167 (226)
T ss_dssp T--SSEEEEES---CGGGCCGGGCCEEEEEECSBBSSC---C------------------------------------HH
T ss_pred C--CcEEEEEC---CcccCcccCCCcCEEEECCchHHH---H------------------------------------HH
Confidence 0 01234333 543333456789999988776431 1 11
Q ss_pred HHHhhccCceEEEEeecc
Q 017514 204 RSEELVAEGRMVLTFLGR 221 (370)
Q Consensus 204 Ra~EL~~GG~lvl~~~g~ 221 (370)
-.+-|+|||+|++.+...
T Consensus 168 ~~~~LkpgG~lv~~~~~~ 185 (226)
T 1i1n_A 168 LIDQLKPGGRLILPVGPA 185 (226)
T ss_dssp HHHTEEEEEEEEEEESCT
T ss_pred HHHhcCCCcEEEEEEecC
Confidence 257799999999987643
|
| >1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6 | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0024 Score=61.24 Aligned_cols=104 Identities=18% Similarity=0.246 Sum_probs=61.6
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCce
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (370)
..+|+|+|||+|..++.+. +. +.-+|+.-|+. .. ...... ... ..+... +-.
T Consensus 39 ~~~VLDiGcGtG~ls~~la--------~~--------g~~~v~~vD~s--~~---~~~a~~---~~~-~~~~~~---~i~ 90 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAA--------KH--------GAKHVIGVDMS--SI---IEMAKE---LVE-LNGFSD---KIT 90 (328)
T ss_dssp TCEEEEETCTTSHHHHHHH--------HT--------CCSEEEEEESS--TH---HHHHHH---HHH-HTTCTT---TEE
T ss_pred CCEEEEecCccHHHHHHHH--------HC--------CCCEEEEEChH--HH---HHHHHH---HHH-HcCCCC---CEE
Confidence 4699999999998887555 21 22478888874 22 122211 111 112110 123
Q ss_pred EEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 017514 131 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 210 (370)
Q Consensus 131 f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~ 210 (370)
++. +++.+--+|.+++|+++|....+.+... .++..+|+.+.+-|+|
T Consensus 91 ~~~---~d~~~~~~~~~~~D~Ivs~~~~~~l~~~------------------------------~~~~~~l~~~~~~Lkp 137 (328)
T 1g6q_1 91 LLR---GKLEDVHLPFPKVDIIISEWMGYFLLYE------------------------------SMMDTVLYARDHYLVE 137 (328)
T ss_dssp EEE---SCTTTSCCSSSCEEEEEECCCBTTBSTT------------------------------CCHHHHHHHHHHHEEE
T ss_pred EEE---CchhhccCCCCcccEEEEeCchhhcccH------------------------------HHHHHHHHHHHhhcCC
Confidence 433 3553333577899999997544433221 1234478888999999
Q ss_pred CceEE
Q 017514 211 EGRMV 215 (370)
Q Consensus 211 GG~lv 215 (370)
||+++
T Consensus 138 gG~li 142 (328)
T 1g6q_1 138 GGLIF 142 (328)
T ss_dssp EEEEE
T ss_pred CeEEE
Confidence 99997
|
| >3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0067 Score=55.09 Aligned_cols=100 Identities=21% Similarity=0.243 Sum_probs=61.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~ 126 (370)
...+|+|+|||+|..++.+. +.. + |..+|+..|+. +......++ ..+...
T Consensus 93 ~~~~vldiG~G~G~~~~~l~--------~~~---~---~~~~v~~~D~~-----------~~~~~~a~~~~~~~~~~~-- 145 (255)
T 3mb5_A 93 PGDFIVEAGVGSGALTLFLA--------NIV---G---PEGRVVSYEIR-----------EDFAKLAWENIKWAGFDD-- 145 (255)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------HHH---C---TTSEEEEECSC-----------HHHHHHHHHHHHHHTCTT--
T ss_pred CCCEEEEecCCchHHHHHHH--------HHh---C---CCeEEEEEecC-----------HHHHHHHHHHHHHcCCCC--
Confidence 45799999999999988766 221 1 45788888874 222211111 112110
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
+-.+ +-+++. ..+|++++|++++. .|.. ..+|+.-.+
T Consensus 146 -~v~~---~~~d~~-~~~~~~~~D~v~~~--------~~~~------------------------------~~~l~~~~~ 182 (255)
T 3mb5_A 146 -RVTI---KLKDIY-EGIEEENVDHVILD--------LPQP------------------------------ERVVEHAAK 182 (255)
T ss_dssp -TEEE---ECSCGG-GCCCCCSEEEEEEC--------SSCG------------------------------GGGHHHHHH
T ss_pred -ceEE---EECchh-hccCCCCcCEEEEC--------CCCH------------------------------HHHHHHHHH
Confidence 1233 334775 45889999999972 2321 014566678
Q ss_pred hhccCceEEEEee
Q 017514 207 ELVAEGRMVLTFL 219 (370)
Q Consensus 207 EL~~GG~lvl~~~ 219 (370)
-|+|||++++...
T Consensus 183 ~L~~gG~l~~~~~ 195 (255)
T 3mb5_A 183 ALKPGGFFVAYTP 195 (255)
T ss_dssp HEEEEEEEEEEES
T ss_pred HcCCCCEEEEEEC
Confidence 8999999998754
|
| >2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0023 Score=57.12 Aligned_cols=103 Identities=14% Similarity=0.056 Sum_probs=62.6
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhC-----C
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLG-----S 122 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~-----~ 122 (370)
..+|+|+|||+|..+..+. +... ....|..+|+.-|.- +.......+ ..+ .
T Consensus 81 ~~~VLdiG~G~G~~~~~la--------~~~~--~~~~~~~~v~~vD~~-----------~~~~~~a~~~~~~~~~~~~~~ 139 (227)
T 2pbf_A 81 GSRAIDVGSGSGYLTVCMA--------IKMN--VLENKNSYVIGLERV-----------KDLVNFSLENIKRDKPELLKI 139 (227)
T ss_dssp TCEEEEESCTTSHHHHHHH--------HHTT--TTTCTTCEEEEEESC-----------HHHHHHHHHHHHHHCGGGGSS
T ss_pred CCEEEEECCCCCHHHHHHH--------HHhc--ccCCCCCEEEEEeCC-----------HHHHHHHHHHHHHcCcccccc
Confidence 4799999999999887665 2210 001244688888874 222111111 112 1
Q ss_pred CCCCCCceEEeecCCCccccc----CCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHH
Q 017514 123 ASGAAGQCFFTGVPGSFYGRL----FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFS 198 (370)
Q Consensus 123 ~~~~~~~~f~~~vpgSFy~~l----~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~ 198 (370)
. +-.|..+ +...-. ++.+++|++++..++|++ +.
T Consensus 140 ~----~v~~~~~---d~~~~~~~~~~~~~~fD~I~~~~~~~~~---~~-------------------------------- 177 (227)
T 2pbf_A 140 D----NFKIIHK---NIYQVNEEEKKELGLFDAIHVGASASEL---PE-------------------------------- 177 (227)
T ss_dssp T----TEEEEEC---CGGGCCHHHHHHHCCEEEEEECSBBSSC---CH--------------------------------
T ss_pred C----CEEEEEC---ChHhcccccCccCCCcCEEEECCchHHH---HH--------------------------------
Confidence 1 2234433 554444 556889999999988863 21
Q ss_pred HHHHHHHHhhccCceEEEEeec
Q 017514 199 LFLKCRSEELVAEGRMVLTFLG 220 (370)
Q Consensus 199 ~fL~~Ra~EL~~GG~lvl~~~g 220 (370)
.-.+-|+|||+|++.+..
T Consensus 178 ----~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 178 ----ILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp ----HHHHHEEEEEEEEEEEEE
T ss_pred ----HHHHhcCCCcEEEEEEcc
Confidence 115679999999999875
|
| >2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0015 Score=55.98 Aligned_cols=33 Identities=15% Similarity=-0.001 Sum_probs=24.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLP 98 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp 98 (370)
..-+|+|+|||+|..++.+. ++ +..+|+..|+-
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~--------~~--------~~~~v~~vD~~ 63 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAV--------SR--------GMSAAVLVEKN 63 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHH--------HT--------TCCEEEEECCC
T ss_pred CCCeEEEeCCCCCHHHHHHH--------Hc--------CCCEEEEEECC
Confidence 34699999999999988655 21 23578888874
|
| >3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A* | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0017 Score=64.93 Aligned_cols=112 Identities=19% Similarity=0.174 Sum_probs=61.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhh-HHHHHHHHHhhCCCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSL-ASFQKILRKQLGSASGAAG 128 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l-~~~~~~~~~~~~~~~~~~~ 128 (370)
..-+|+|+|||+|..++.+. ... +.-+|+--|+-. +.-.+.+.. ..+.. ..+..|... .+
T Consensus 173 ~gd~VLDLGCGtG~l~l~lA--------~~~-------g~~kVvGIDiS~-~~lelAr~n~e~frk-r~~~~Gl~~--~r 233 (438)
T 3uwp_A 173 DDDLFVDLGSGVGQVVLQVA--------AAT-------NCKHHYGVEKAD-IPAKYAETMDREFRK-WMKWYGKKH--AE 233 (438)
T ss_dssp TTCEEEEESCTTSHHHHHHH--------HHC-------CCSEEEEEECCH-HHHHHHHHHHHHHHH-HHHHHTBCC--CE
T ss_pred CCCEEEEeCCCCCHHHHHHH--------HHC-------CCCEEEEEeCCH-HHHHHHHHHHHHHHH-HHHHhCCCC--CC
Confidence 34789999999999887665 221 223477777631 111111111 00000 011123210 02
Q ss_pred ceEEeecCCCcccccCCC--CceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 129 QCFFTGVPGSFYGRLFPR--NSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~--~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
--|+. |+|.+--++. .++|+++++..++| | |...-|+...+
T Consensus 234 Vefi~---GD~~~lp~~d~~~~aDVVf~Nn~~F~----p------------------------------dl~~aL~Ei~R 276 (438)
T 3uwp_A 234 YTLER---GDFLSEEWRERIANTSVIFVNNFAFG----P------------------------------EVDHQLKERFA 276 (438)
T ss_dssp EEEEE---CCTTSHHHHHHHHTCSEEEECCTTCC----H------------------------------HHHHHHHHHHT
T ss_pred eEEEE---CcccCCccccccCCccEEEEcccccC----c------------------------------hHHHHHHHHHH
Confidence 23444 4886544433 47999999877765 3 22224556678
Q ss_pred hhccCceEEEE
Q 017514 207 ELVAEGRMVLT 217 (370)
Q Consensus 207 EL~~GG~lvl~ 217 (370)
.|+|||++|++
T Consensus 277 vLKPGGrIVss 287 (438)
T 3uwp_A 277 NMKEGGRIVSS 287 (438)
T ss_dssp TSCTTCEEEES
T ss_pred cCCCCcEEEEe
Confidence 99999999987
|
| >3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0024 Score=58.56 Aligned_cols=35 Identities=17% Similarity=0.191 Sum_probs=26.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLP 98 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp 98 (370)
+..+|+|+|||+|..|+.+. +. -++..+|+.-|+-
T Consensus 63 ~~~~VLdiG~G~G~~~~~la--------~~------~~~~~~v~~vD~s 97 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMA--------RE------LPADGQLLTLEAD 97 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHH--------TT------SCTTCEEEEEECC
T ss_pred CCCEEEEecCCchHHHHHHH--------Hh------CCCCCEEEEEECC
Confidence 35799999999999988766 22 1225788888874
|
| >1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0095 Score=54.86 Aligned_cols=100 Identities=23% Similarity=0.226 Sum_probs=61.5
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hh-C--CCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QL-G--SAS 124 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~-~--~~~ 124 (370)
.-+|+|+|||+|..+..+. +.. + |..+|+.-|+- +...+...+ .. + ..
T Consensus 100 ~~~vLdiG~G~G~~~~~l~--------~~~---~---~~~~v~~vD~~-----------~~~~~~a~~~~~~~~g~~~~- 153 (280)
T 1i9g_A 100 GARVLEAGAGSGALTLSLL--------RAV---G---PAGQVISYEQR-----------ADHAEHARRNVSGCYGQPPD- 153 (280)
T ss_dssp TCEEEEECCTTSHHHHHHH--------HHH---C---TTSEEEEECSC-----------HHHHHHHHHHHHHHHTSCCT-
T ss_pred CCEEEEEcccccHHHHHHH--------HHh---C---CCCEEEEEeCC-----------HHHHHHHHHHHHHhcCCCCC-
Confidence 4689999999999888666 221 1 34678888874 222111111 11 2 11
Q ss_pred CCCCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017514 125 GAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCR 204 (370)
Q Consensus 125 ~~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~R 204 (370)
+-.+ +-+++.+..++++++|++++.. |. +. .+|+.-
T Consensus 154 ---~v~~---~~~d~~~~~~~~~~~D~v~~~~--------~~---------------~~---------------~~l~~~ 189 (280)
T 1i9g_A 154 ---NWRL---VVSDLADSELPDGSVDRAVLDM--------LA---------------PW---------------EVLDAV 189 (280)
T ss_dssp ---TEEE---ECSCGGGCCCCTTCEEEEEEES--------SC---------------GG---------------GGHHHH
T ss_pred ---cEEE---EECchHhcCCCCCceeEEEECC--------cC---------------HH---------------HHHHHH
Confidence 1233 3347766567788999999821 21 00 146666
Q ss_pred HHhhccCceEEEEeec
Q 017514 205 SEELVAEGRMVLTFLG 220 (370)
Q Consensus 205 a~EL~~GG~lvl~~~g 220 (370)
.+-|+|||++++....
T Consensus 190 ~~~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 190 SRLLVAGGVLMVYVAT 205 (280)
T ss_dssp HHHEEEEEEEEEEESS
T ss_pred HHhCCCCCEEEEEeCC
Confidence 7889999999998753
|
| >2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0038 Score=60.38 Aligned_cols=77 Identities=13% Similarity=0.191 Sum_probs=43.5
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCce
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (370)
..+|+|+|||+|..++.+. +. +..+|+.-|+. ..- ..... .. +..+..- +-.
T Consensus 51 ~~~VLDiGcGtG~ls~~la--------~~--------g~~~V~~vD~s--~~~---~~a~~---~~-~~~~l~~---~v~ 102 (348)
T 2y1w_A 51 DKIVLDVGCGSGILSFFAA--------QA--------GARKIYAVEAS--TMA---QHAEV---LV-KSNNLTD---RIV 102 (348)
T ss_dssp TCEEEEETCTTSHHHHHHH--------HT--------TCSEEEEEECS--THH---HHHHH---HH-HHTTCTT---TEE
T ss_pred cCEEEEcCCCccHHHHHHH--------hC--------CCCEEEEECCH--HHH---HHHHH---HH-HHcCCCC---cEE
Confidence 4699999999999887655 21 23578888874 211 22211 11 1112110 123
Q ss_pred EEeecCCCcccccCCCCceeEEEeccccc
Q 017514 131 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQ 159 (370)
Q Consensus 131 f~~~vpgSFy~~l~p~~sv~~~~S~~alh 159 (370)
++. +++ ..+-+++++|+++|...++
T Consensus 103 ~~~---~d~-~~~~~~~~~D~Ivs~~~~~ 127 (348)
T 2y1w_A 103 VIP---GKV-EEVSLPEQVDIIISEPMGY 127 (348)
T ss_dssp EEE---SCT-TTCCCSSCEEEEEECCCBT
T ss_pred EEE---cch-hhCCCCCceeEEEEeCchh
Confidence 333 355 3444457899999987654
|
| >1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7 | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0094 Score=53.35 Aligned_cols=103 Identities=16% Similarity=0.122 Sum_probs=60.6
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhC-----C
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLG-----S 122 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~-----~ 122 (370)
..+|+|+|||+|..+..+. +.+...+ ..+..+|+..|.- +.......+ ..+ .
T Consensus 85 ~~~VLdiG~G~G~~~~~la--------~~~~~~~-~~~~~~v~~vD~~-----------~~~~~~a~~~~~~~~~~~~~~ 144 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFY--------RYIKAKG-VDADTRIVGIEHQ-----------AELVRRSKANLNTDDRSMLDS 144 (227)
T ss_dssp TCEEEEESCTTSHHHHHHH--------HHHHHSC-CCTTCEEEEEESC-----------HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCccHHHHHHH--------Hhccccc-CCccCEEEEEEcC-----------HHHHHHHHHHHHhcCccccCC
Confidence 4699999999999988666 2211001 1123577888864 222111111 001 1
Q ss_pred CCCCCCceEEeecCCCcccccCCC-CceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHH
Q 017514 123 ASGAAGQCFFTGVPGSFYGRLFPR-NSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFL 201 (370)
Q Consensus 123 ~~~~~~~~f~~~vpgSFy~~l~p~-~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL 201 (370)
. +-.|..+ +... -+|+ +++|++++..++||+ |. +
T Consensus 145 ~----~v~~~~~---d~~~-~~~~~~~fD~I~~~~~~~~~---~~-----------------~----------------- 179 (227)
T 1r18_A 145 G----QLLIVEG---DGRK-GYPPNAPYNAIHVGAAAPDT---PT-----------------E----------------- 179 (227)
T ss_dssp T----SEEEEES---CGGG-CCGGGCSEEEEEECSCBSSC---CH-----------------H-----------------
T ss_pred C----ceEEEEC---Cccc-CCCcCCCccEEEECCchHHH---HH-----------------H-----------------
Confidence 0 2234333 5544 3444 889999999999873 31 1
Q ss_pred HHHHHhhccCceEEEEeec
Q 017514 202 KCRSEELVAEGRMVLTFLG 220 (370)
Q Consensus 202 ~~Ra~EL~~GG~lvl~~~g 220 (370)
-.+-|+|||+|++.+..
T Consensus 180 --~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 180 --LINQLASGGRLIVPVGP 196 (227)
T ss_dssp --HHHTEEEEEEEEEEESC
T ss_pred --HHHHhcCCCEEEEEEec
Confidence 15679999999999864
|
| >1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0047 Score=57.36 Aligned_cols=99 Identities=7% Similarity=-0.012 Sum_probs=61.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHh---h-CCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQ---L-GSASG 125 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~---~-~~~~~ 125 (370)
...+|+|+|||+|..++.+. +.. .|..+|+.-|+- +...+...+. . +..
T Consensus 110 ~~~~VLD~G~G~G~~~~~la--------~~~------~~~~~v~~vD~s-----------~~~~~~a~~~~~~~~g~~-- 162 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYIL--------YAL------NGKGTLTVVERD-----------EDNLKKAMDNLSEFYDIG-- 162 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------HHH------TTSSEEEEECSC-----------HHHHHHHHHHHHTTSCCT--
T ss_pred CcCEEEEecCCCCHHHHHHH--------HHc------CCCCEEEEEECC-----------HHHHHHHHHHHHhcCCCC--
Confidence 45799999999999888666 221 134788888874 2222222111 1 211
Q ss_pred CCCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 126 AAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRS 205 (370)
Q Consensus 126 ~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra 205 (370)
+-.|. -+++.+ .+|++++|++++ | +|.. . .+|+.-.
T Consensus 163 --~v~~~---~~d~~~-~~~~~~fD~Vi~----~----~~~~---------------~---------------~~l~~~~ 198 (275)
T 1yb2_A 163 --NVRTS---RSDIAD-FISDQMYDAVIA----D----IPDP---------------W---------------NHVQKIA 198 (275)
T ss_dssp --TEEEE---CSCTTT-CCCSCCEEEEEE----C----CSCG---------------G---------------GSHHHHH
T ss_pred --cEEEE---ECchhc-cCcCCCccEEEE----c----CcCH---------------H---------------HHHHHHH
Confidence 22333 346644 667889999998 2 2321 0 2566667
Q ss_pred HhhccCceEEEEee
Q 017514 206 EELVAEGRMVLTFL 219 (370)
Q Consensus 206 ~EL~~GG~lvl~~~ 219 (370)
+-|+|||++++...
T Consensus 199 ~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 199 SMMKPGSVATFYLP 212 (275)
T ss_dssp HTEEEEEEEEEEES
T ss_pred HHcCCCCEEEEEeC
Confidence 88999999999874
|
| >2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0042 Score=59.42 Aligned_cols=34 Identities=21% Similarity=0.322 Sum_probs=24.6
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLP 98 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp 98 (370)
..+|+|+|||+|..++.+. +.. | |..+|+.-|.-
T Consensus 106 g~~VLDiG~G~G~~~~~la--------~~~---g---~~~~v~~vD~~ 139 (336)
T 2b25_A 106 GDTVLEAGSGSGGMSLFLS--------KAV---G---SQGRVISFEVR 139 (336)
T ss_dssp TCEEEEECCTTSHHHHHHH--------HHH---C---TTCEEEEEESS
T ss_pred CCEEEEeCCCcCHHHHHHH--------HHh---C---CCceEEEEeCC
Confidence 4699999999999988766 221 2 34677777763
|
| >2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0022 Score=56.86 Aligned_cols=31 Identities=16% Similarity=-0.026 Sum_probs=23.2
Q ss_pred eEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCC
Q 017514 52 VAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLP 98 (370)
Q Consensus 52 ~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp 98 (370)
.+|+|+|||+|..++.++ .+ + . -+|+..|+-
T Consensus 55 ~~vLDlGcGtG~~~~~~~--------~~----~---~-~~v~gvD~s 85 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEAL--------SR----Q---A-KKVTFLELD 85 (201)
T ss_dssp CEEEETTCTTCHHHHHHH--------HT----T---C-SEEEEECSC
T ss_pred CeEEEcCCccCHHHHHHH--------Hc----c---C-CEEEEEECC
Confidence 689999999999988655 21 1 1 468888875
|
| >3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0027 Score=59.49 Aligned_cols=117 Identities=16% Similarity=0.156 Sum_probs=62.3
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHH----HhhCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILR----KQLGSASGA 126 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~----~~~~~~~~~ 126 (370)
..+|+|+|||+|..++.+. +. + . -+|+..|+++.+.-.+.+. ... +..+.....
T Consensus 80 ~~~vLDlG~G~G~~~~~~a--------~~----~---~-~~v~~~D~s~~~~~~~a~~------n~~~N~~~~~~~~~~~ 137 (281)
T 3bzb_A 80 GKTVCELGAGAGLVSIVAF--------LA----G---A-DQVVATDYPDPEILNSLES------NIREHTANSCSSETVK 137 (281)
T ss_dssp TCEEEETTCTTSHHHHHHH--------HT----T---C-SEEEEEECSCHHHHHHHHH------HHHTTCC---------
T ss_pred CCeEEEecccccHHHHHHH--------Hc----C---C-CEEEEEeCCCHHHHHHHHH------HHHHhhhhhcccccCC
Confidence 3599999999999887554 21 1 1 3788999842222111111 000 000100000
Q ss_pred -CCceEEeecCCCcccccC---CCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHH
Q 017514 127 -AGQCFFTGVPGSFYGRLF---PRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLK 202 (370)
Q Consensus 127 -~~~~f~~~vpgSFy~~l~---p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~ 202 (370)
.+-.+....-|+....+. +++++|+++++.++++... ...+|+
T Consensus 138 ~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~---------------------------------~~~ll~ 184 (281)
T 3bzb_A 138 RASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQA---------------------------------HDALLR 184 (281)
T ss_dssp -CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGG---------------------------------HHHHHH
T ss_pred CCCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcccChHH---------------------------------HHHHHH
Confidence 011232222223323343 5789999999888888322 222555
Q ss_pred HHHHhhc---c--CceEEEEeeccC
Q 017514 203 CRSEELV---A--EGRMVLTFLGRK 222 (370)
Q Consensus 203 ~Ra~EL~---~--GG~lvl~~~g~~ 222 (370)
.-.+-|+ | ||++++.+..+.
T Consensus 185 ~l~~~Lk~~~p~~gG~l~v~~~~~~ 209 (281)
T 3bzb_A 185 SVKMLLALPANDPTAVALVTFTHHR 209 (281)
T ss_dssp HHHHHBCCTTTCTTCEEEEEECC--
T ss_pred HHHHHhcccCCCCCCEEEEEEEeee
Confidence 5567788 9 999988776543
|
| >2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0066 Score=54.61 Aligned_cols=105 Identities=16% Similarity=0.185 Sum_probs=60.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
...+|+|+|||+|..+..+. +.+ + |.-+|+.-|+... .+....... +. .. +-
T Consensus 77 ~~~~vLDlG~G~G~~~~~la--------~~~---g---~~~~v~gvD~s~~-------~i~~~~~~a-~~-~~-----~v 128 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVS--------DIV---G---PDGLVYAVEFSHR-------SGRDLINLA-KK-RT-----NI 128 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------HHH---C---TTCEEEEECCCHH-------HHHHHHHHH-HH-CT-----TE
T ss_pred CCCEEEEEcccCCHHHHHHH--------HHh---C---CCcEEEEEECCHH-------HHHHHHHHh-hc-cC-----Ce
Confidence 34699999999999988776 332 1 3357777787510 001111111 11 11 22
Q ss_pred eEEeecCCCcccc--c-CCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 130 CFFTGVPGSFYGR--L-FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 130 ~f~~~vpgSFy~~--l-~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
.|..+ ++... + ++++++|++++..+ .|. ....++..-.+
T Consensus 129 ~~~~~---d~~~~~~~~~~~~~~D~V~~~~~------~~~-----------------------------~~~~~~~~~~~ 170 (233)
T 2ipx_A 129 IPVIE---DARHPHKYRMLIAMVDVIFADVA------QPD-----------------------------QTRIVALNAHT 170 (233)
T ss_dssp EEECS---CTTCGGGGGGGCCCEEEEEECCC------CTT-----------------------------HHHHHHHHHHH
T ss_pred EEEEc---ccCChhhhcccCCcEEEEEEcCC------Ccc-----------------------------HHHHHHHHHHH
Confidence 34443 55332 1 25789999998433 111 11225555678
Q ss_pred hhccCceEEEEeec
Q 017514 207 ELVAEGRMVLTFLG 220 (370)
Q Consensus 207 EL~~GG~lvl~~~g 220 (370)
-|+|||++++.+..
T Consensus 171 ~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 171 FLRNGGHFVISIKA 184 (233)
T ss_dssp HEEEEEEEEEEEEH
T ss_pred HcCCCeEEEEEEcc
Confidence 99999999997664
|
| >1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31 | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0049 Score=61.91 Aligned_cols=20 Identities=25% Similarity=0.308 Sum_probs=17.3
Q ss_pred CceEEEeecCCCCcchHHHH
Q 017514 50 TKVAIADLGCSSGPNTLLVA 69 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~ 69 (370)
...+|+|+|||+|..++.+.
T Consensus 242 ~g~~VLDLGCGsG~la~~LA 261 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQAA 261 (433)
T ss_dssp TTCEEEEESCTTSHHHHHHH
T ss_pred CCCEEEEeCCCcCHHHHHHH
Confidence 45799999999999988766
|
| >1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A* | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0035 Score=56.57 Aligned_cols=97 Identities=16% Similarity=0.261 Sum_probs=58.2
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~~ 127 (370)
..+|+|+|||+|..+..+. +.. + .+|+..|.- +.......+ ..+..
T Consensus 92 ~~~vLdiG~G~G~~~~~la--------~~~-------~-~~v~~vD~~-----------~~~~~~a~~~~~~~~~~---- 140 (235)
T 1jg1_A 92 GMNILEVGTGSGWNAALIS--------EIV-------K-TDVYTIERI-----------PELVEFAKRNLERAGVK---- 140 (235)
T ss_dssp TCCEEEECCTTSHHHHHHH--------HHH-------C-SCEEEEESC-----------HHHHHHHHHHHHHTTCC----
T ss_pred CCEEEEEeCCcCHHHHHHH--------HHh-------C-CEEEEEeCC-----------HHHHHHHHHHHHHcCCC----
Confidence 4689999999999988665 332 2 466777754 222111111 11211
Q ss_pred CceEEeecCCCcccccCCCC-ceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 128 GQCFFTGVPGSFYGRLFPRN-SVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~p~~-sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
.-.|. .+++.. -+|++ .+|++++..++|++ |. .+ .+
T Consensus 141 ~v~~~---~~d~~~-~~~~~~~fD~Ii~~~~~~~~---~~-----------------~~-------------------~~ 177 (235)
T 1jg1_A 141 NVHVI---LGDGSK-GFPPKAPYDVIIVTAGAPKI---PE-----------------PL-------------------IE 177 (235)
T ss_dssp SEEEE---ESCGGG-CCGGGCCEEEEEECSBBSSC---CH-----------------HH-------------------HH
T ss_pred CcEEE---ECCccc-CCCCCCCccEEEECCcHHHH---HH-----------------HH-------------------HH
Confidence 21233 346533 34444 49999999988873 21 11 46
Q ss_pred hhccCceEEEEeecc
Q 017514 207 ELVAEGRMVLTFLGR 221 (370)
Q Consensus 207 EL~~GG~lvl~~~g~ 221 (370)
-|+|||++++.+...
T Consensus 178 ~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 178 QLKIGGKLIIPVGSY 192 (235)
T ss_dssp TEEEEEEEEEEECSS
T ss_pred hcCCCcEEEEEEecC
Confidence 799999999998643
|
| >2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0035 Score=56.40 Aligned_cols=100 Identities=14% Similarity=0.102 Sum_probs=59.6
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHh---hCCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQ---LGSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~---~~~~~~~~ 127 (370)
..+|+|+|||+|..++.+. +.+ |..+|+..|.- +.......+. .+...
T Consensus 55 ~~~vLdiG~G~G~~~~~la--------~~~-------~~~~v~~vD~~-----------~~~~~~a~~~~~~~~~~~--- 105 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMA--------QAL-------PEATIVSIERD-----------ERRYEEAHKHVKALGLES--- 105 (233)
T ss_dssp CSEEEEECCTTSHHHHHHH--------HHC-------TTCEEEEECCC-----------HHHHHHHHHHHHHTTCTT---
T ss_pred CCEEEEecCCCcHHHHHHH--------HHC-------CCCEEEEEECC-----------HHHHHHHHHHHHHcCCCC---
Confidence 4699999999999988766 321 24678888874 3222222111 12110
Q ss_pred CceEEeecCCCcccccC---CCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017514 128 GQCFFTGVPGSFYGRLF---PRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCR 204 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~---p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~R 204 (370)
+-.|.. +++..-+. .++++|++++....+ ++..+|+.-
T Consensus 106 ~v~~~~---~d~~~~~~~~~~~~~fD~I~~~~~~~------------------------------------~~~~~l~~~ 146 (233)
T 2gpy_A 106 RIELLF---GDALQLGEKLELYPLFDVLFIDAAKG------------------------------------QYRRFFDMY 146 (233)
T ss_dssp TEEEEC---SCGGGSHHHHTTSCCEEEEEEEGGGS------------------------------------CHHHHHHHH
T ss_pred cEEEEE---CCHHHHHHhcccCCCccEEEECCCHH------------------------------------HHHHHHHHH
Confidence 123333 35533221 167899999754422 223467777
Q ss_pred HHhhccCceEEEEe
Q 017514 205 SEELVAEGRMVLTF 218 (370)
Q Consensus 205 a~EL~~GG~lvl~~ 218 (370)
.+-|+|||++++..
T Consensus 147 ~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 147 SPMVRPGGLILSDN 160 (233)
T ss_dssp GGGEEEEEEEEEET
T ss_pred HHHcCCCeEEEEEc
Confidence 88999999999974
|
| >1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1 | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0059 Score=58.06 Aligned_cols=100 Identities=14% Similarity=0.235 Sum_probs=62.1
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~~ 127 (370)
..+|+|+|||+|..++.+. +.. + ...+|+..|+- +...+..++ ..+..
T Consensus 76 ~~~VLDiGcG~G~~~~~la--------~~~---~---~~~~v~gvD~s-----------~~~~~~a~~~~~~~g~~---- 126 (317)
T 1dl5_A 76 GMRVLEIGGGTGYNAAVMS--------RVV---G---EKGLVVSVEYS-----------RKICEIAKRNVERLGIE---- 126 (317)
T ss_dssp TCEEEEECCTTSHHHHHHH--------HHH---C---TTCEEEEEESC-----------HHHHHHHHHHHHHTTCC----
T ss_pred cCEEEEecCCchHHHHHHH--------Hhc---C---CCCEEEEEECC-----------HHHHHHHHHHHHHcCCC----
Confidence 4699999999999887665 321 0 12567888874 222221111 11211
Q ss_pred CceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017514 128 GQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~E 207 (370)
.-.|. -+++..-+.+.+++|++++...+|++. . .+ .+-
T Consensus 127 ~v~~~---~~d~~~~~~~~~~fD~Iv~~~~~~~~~---~-----------------~~-------------------~~~ 164 (317)
T 1dl5_A 127 NVIFV---CGDGYYGVPEFSPYDVIFVTVGVDEVP---E-----------------TW-------------------FTQ 164 (317)
T ss_dssp SEEEE---ESCGGGCCGGGCCEEEEEECSBBSCCC---H-----------------HH-------------------HHH
T ss_pred CeEEE---ECChhhccccCCCeEEEEEcCCHHHHH---H-----------------HH-------------------HHh
Confidence 22333 346644455678999999999998742 1 11 457
Q ss_pred hccCceEEEEeecc
Q 017514 208 LVAEGRMVLTFLGR 221 (370)
Q Consensus 208 L~~GG~lvl~~~g~ 221 (370)
|+|||++++.+...
T Consensus 165 LkpgG~lvi~~~~~ 178 (317)
T 1dl5_A 165 LKEGGRVIVPINLK 178 (317)
T ss_dssp EEEEEEEEEEBCBG
T ss_pred cCCCcEEEEEECCC
Confidence 99999999987543
|
| >2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0068 Score=55.23 Aligned_cols=123 Identities=18% Similarity=0.192 Sum_probs=62.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCC--CCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGS--ASGAA 127 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~--~~~~~ 127 (370)
+..+|+|+|||+|..++.+. +. + |...|+.-|.-. .....+............. .+ .
T Consensus 49 ~~~~vLDiGcG~G~~~~~la--------~~----~---~~~~v~gvD~s~----~~l~~a~~~~~~~~~~~~~~~~~--~ 107 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLS--------PA----F---PEDLILGMEIRV----QVTNYVEDRIIALRNNTASKHGF--Q 107 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHH--------HH----S---TTSEEEEEESCH----HHHHHHHHHHHHHHHTC-CCSTT--T
T ss_pred CCCEEEEEcCCCCHHHHHHH--------Hh----C---CCCCEEEEEcCH----HHHHHHHHHHHHHhhccccccCC--C
Confidence 45799999999999988766 32 1 456788888741 1111111100000000000 11 0
Q ss_pred CceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017514 128 GQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~E 207 (370)
+-.|+.+=...+....++.+++|.++....=.|.... ..+..+. . ..||+.-++-
T Consensus 108 nv~~~~~D~~~~l~~~~~~~~~d~v~~~~p~p~~k~~-----~~~~r~~-----~---------------~~~l~~~~~~ 162 (246)
T 2vdv_E 108 NINVLRGNAMKFLPNFFEKGQLSKMFFCFPDPHFKQR-----KHKARII-----T---------------NTLLSEYAYV 162 (246)
T ss_dssp TEEEEECCTTSCGGGTSCTTCEEEEEEESCCCC-----------CSSCC-----C---------------HHHHHHHHHH
T ss_pred cEEEEeccHHHHHHHhccccccCEEEEECCCcccccc-----hhHHhhc-----c---------------HHHHHHHHHH
Confidence 2234444222233456788999999854422221110 0011110 0 2367777889
Q ss_pred hccCceEEEEe
Q 017514 208 LVAEGRMVLTF 218 (370)
Q Consensus 208 L~~GG~lvl~~ 218 (370)
|+|||+|++.+
T Consensus 163 LkpgG~l~~~t 173 (246)
T 2vdv_E 163 LKEGGVVYTIT 173 (246)
T ss_dssp EEEEEEEEEEE
T ss_pred cCCCCEEEEEe
Confidence 99999999954
|
| >1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0082 Score=55.61 Aligned_cols=99 Identities=21% Similarity=0.252 Sum_probs=59.8
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~~ 127 (370)
..+|+|+|||+|..++.+. +.. + |..+|+..|.- +.......+ ..+...
T Consensus 113 ~~~VLDiG~G~G~~~~~la--------~~~---~---~~~~v~~vD~s-----------~~~~~~a~~~~~~~~~~~--- 164 (277)
T 1o54_A 113 GDRIIDTGVGSGAMCAVLA--------RAV---G---SSGKVFAYEKR-----------EEFAKLAESNLTKWGLIE--- 164 (277)
T ss_dssp TCEEEEECCTTSHHHHHHH--------HHT---T---TTCEEEEECCC-----------HHHHHHHHHHHHHTTCGG---
T ss_pred CCEEEEECCcCCHHHHHHH--------HHh---C---CCcEEEEEECC-----------HHHHHHHHHHHHHcCCCC---
Confidence 4699999999999888665 221 1 34688888874 222211111 112100
Q ss_pred CceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017514 128 GQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~E 207 (370)
+-.+ +.+++.+. +|++++|++++. .|.. ..+|+.-.+-
T Consensus 165 ~v~~---~~~d~~~~-~~~~~~D~V~~~--------~~~~------------------------------~~~l~~~~~~ 202 (277)
T 1o54_A 165 RVTI---KVRDISEG-FDEKDVDALFLD--------VPDP------------------------------WNYIDKCWEA 202 (277)
T ss_dssp GEEE---ECCCGGGC-CSCCSEEEEEEC--------CSCG------------------------------GGTHHHHHHH
T ss_pred CEEE---EECCHHHc-ccCCccCEEEEC--------CcCH------------------------------HHHHHHHHHH
Confidence 1123 34466443 788899999972 2321 0145555778
Q ss_pred hccCceEEEEee
Q 017514 208 LVAEGRMVLTFL 219 (370)
Q Consensus 208 L~~GG~lvl~~~ 219 (370)
|+|||++++...
T Consensus 203 L~pgG~l~~~~~ 214 (277)
T 1o54_A 203 LKGGGRFATVCP 214 (277)
T ss_dssp EEEEEEEEEEES
T ss_pred cCCCCEEEEEeC
Confidence 999999999874
|
| >3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A* | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0092 Score=57.00 Aligned_cols=99 Identities=14% Similarity=0.087 Sum_probs=62.0
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASG 125 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~ 125 (370)
...-+|+|+|||+|+.|..++. +. +..+|+--|+- +...+.-++ +.+.+
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA--------~~-------~ga~V~gIDis-----------~~~l~~Ar~~~~~~gl~-- 172 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLS--------HV-------YGMRVNVVEIE-----------PDIAELSRKVIEGLGVD-- 172 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHH--------HT-------TCCEEEEEESS-----------HHHHHHHHHHHHHHTCC--
T ss_pred CCcCEEEEECCCccHHHHHHHH--------Hc-------cCCEEEEEECC-----------HHHHHHHHHHHHhcCCC--
Confidence 3468999999999998866652 11 23678888874 333222111 11321
Q ss_pred CCCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 126 AAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRS 205 (370)
Q Consensus 126 ~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra 205 (370)
+-.|+.| +..+ +|++++|++++... +|+ ...+|+.-.
T Consensus 173 --~v~~v~g---Da~~--l~d~~FDvV~~~a~------~~d------------------------------~~~~l~el~ 209 (298)
T 3fpf_A 173 --GVNVITG---DETV--IDGLEFDVLMVAAL------AEP------------------------------KRRVFRNIH 209 (298)
T ss_dssp --SEEEEES---CGGG--GGGCCCSEEEECTT------CSC------------------------------HHHHHHHHH
T ss_pred --CeEEEEC---chhh--CCCCCcCEEEECCC------ccC------------------------------HHHHHHHHH
Confidence 3356555 5533 47899999997543 231 123667778
Q ss_pred HhhccCceEEEEe
Q 017514 206 EELVAEGRMVLTF 218 (370)
Q Consensus 206 ~EL~~GG~lvl~~ 218 (370)
+-|+|||+|++..
T Consensus 210 r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 210 RYVDTETRIIYRT 222 (298)
T ss_dssp HHCCTTCEEEEEE
T ss_pred HHcCCCcEEEEEc
Confidence 8999999999864
|
| >2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0027 Score=54.46 Aligned_cols=33 Identities=12% Similarity=-0.102 Sum_probs=24.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLP 98 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp 98 (370)
...+|+|+|||+|..++.++ +. +..+|+..|+-
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~--------~~--------~~~~v~~vD~~ 76 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAV--------SR--------GMDKSICIEKN 76 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHH--------HT--------TCSEEEEEESC
T ss_pred CCCCEEEeCCccCHHHHHHH--------Hc--------CCCEEEEEECC
Confidence 34699999999999988655 21 23578888874
|
| >2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.69 E-value=0.008 Score=54.41 Aligned_cols=100 Identities=13% Similarity=0.068 Sum_probs=60.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hh-CCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QL-GSASG 125 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~-~~~~~ 125 (370)
..-+|+|+|||+|..++.+. +.. + |..+|+.-|.- +.......+ .. +..
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~--------~~~---~---~~~~v~~~D~~-----------~~~~~~a~~~~~~~~g~~-- 148 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLA--------RAV---G---EKGLVESYEAR-----------PHHLAQAERNVRAFWQVE-- 148 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------HHH---C---TTSEEEEEESC-----------HHHHHHHHHHHHHHCCCC--
T ss_pred CCCEEEEECCCcCHHHHHHH--------HHh---C---CCCEEEEEeCC-----------HHHHHHHHHHHHHhcCCC--
Confidence 34699999999999888666 221 1 34678888874 222222111 11 211
Q ss_pred CCCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 126 AAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRS 205 (370)
Q Consensus 126 ~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra 205 (370)
+-.|.. +++.+.-+|++++|++++. + |.. ..+|+.-.
T Consensus 149 --~v~~~~---~d~~~~~~~~~~~D~v~~~----~----~~~------------------------------~~~l~~~~ 185 (258)
T 2pwy_A 149 --NVRFHL---GKLEEAELEEAAYDGVALD----L----MEP------------------------------WKVLEKAA 185 (258)
T ss_dssp --CEEEEE---SCGGGCCCCTTCEEEEEEE----S----SCG------------------------------GGGHHHHH
T ss_pred --CEEEEE---CchhhcCCCCCCcCEEEEC----C----cCH------------------------------HHHHHHHH
Confidence 223433 3664433788899999972 2 321 01566667
Q ss_pred HhhccCceEEEEee
Q 017514 206 EELVAEGRMVLTFL 219 (370)
Q Consensus 206 ~EL~~GG~lvl~~~ 219 (370)
+-|+|||++++...
T Consensus 186 ~~L~~gG~l~~~~~ 199 (258)
T 2pwy_A 186 LALKPDRFLVAYLP 199 (258)
T ss_dssp HHEEEEEEEEEEES
T ss_pred HhCCCCCEEEEEeC
Confidence 88999999999874
|
| >3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A* | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0056 Score=54.43 Aligned_cols=35 Identities=17% Similarity=0.132 Sum_probs=26.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLP 98 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp 98 (370)
+..+|+|+|||+|..|+.+. +. -++..+|+..|+-
T Consensus 58 ~~~~vLdiG~G~G~~~~~la--------~~------~~~~~~v~~vD~~ 92 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLA--------RG------LSSGGRVVTLEAS 92 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHH--------TT------CCSSCEEEEEESC
T ss_pred CCCEEEEecCCccHHHHHHH--------Hh------CCCCCEEEEEECC
Confidence 35799999999999988766 22 1224688888874
|
| >3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0047 Score=59.52 Aligned_cols=113 Identities=15% Similarity=0.125 Sum_probs=68.6
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (370)
+++.+|+|+|||+|..+..+. +++ |..+|..-|+- +...+.-++..+.. ...+
T Consensus 88 p~~~rVLdIG~G~G~la~~la--------~~~-------p~~~v~~VEid-----------p~vi~~Ar~~~~~~-~~~r 140 (317)
T 3gjy_A 88 ASKLRITHLGGGACTMARYFA--------DVY-------PQSRNTVVELD-----------AELARLSREWFDIP-RAPR 140 (317)
T ss_dssp GGGCEEEEESCGGGHHHHHHH--------HHS-------TTCEEEEEESC-----------HHHHHHHHHHSCCC-CTTT
T ss_pred CCCCEEEEEECCcCHHHHHHH--------HHC-------CCcEEEEEECC-----------HHHHHHHHHhcccc-CCCc
Confidence 456799999999998877666 332 44677777775 43332222222210 0002
Q ss_pred ceEEeecCCCccccc--CCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 129 QCFFTGVPGSFYGRL--FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l--~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
--++.+ +..+-+ ++++++|++++....|| ..|..+.. ..||+.-.+
T Consensus 141 v~v~~~---Da~~~l~~~~~~~fDvIi~D~~~~~--~~~~~L~t---------------------------~efl~~~~r 188 (317)
T 3gjy_A 141 VKIRVD---DARMVAESFTPASRDVIIRDVFAGA--ITPQNFTT---------------------------VEFFEHCHR 188 (317)
T ss_dssp EEEEES---CHHHHHHTCCTTCEEEEEECCSTTS--CCCGGGSB---------------------------HHHHHHHHH
T ss_pred eEEEEC---cHHHHHhhccCCCCCEEEECCCCcc--ccchhhhH---------------------------HHHHHHHHH
Confidence 234444 433222 36789999999877676 22332210 237777789
Q ss_pred hhccCceEEEEeec
Q 017514 207 ELVAEGRMVLTFLG 220 (370)
Q Consensus 207 EL~~GG~lvl~~~g 220 (370)
-|+|||+|++....
T Consensus 189 ~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 189 GLAPGGLYVANCGD 202 (317)
T ss_dssp HEEEEEEEEEEEEE
T ss_pred hcCCCcEEEEEecC
Confidence 99999999998864
|
| >3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0037 Score=56.56 Aligned_cols=101 Identities=11% Similarity=0.123 Sum_probs=60.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~ 126 (370)
+..+|+|+|||+|..++.+. +. .|..+|+.-|+- +......++ ..+...
T Consensus 71 ~~~~vLDiG~G~G~~~~~la--------~~-------~~~~~v~~vD~~-----------~~~~~~a~~~~~~~~~~~-- 122 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFA--------SI-------SDDIHVTTIERN-----------ETMIQYAKQNLATYHFEN-- 122 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHH--------TT-------CTTCEEEEEECC-----------HHHHHHHHHHHHHTTCTT--
T ss_pred CCCEEEEEeCchhHHHHHHH--------Hh-------CCCCEEEEEECC-----------HHHHHHHHHHHHHcCCCC--
Confidence 35799999999999988766 21 135788888874 332222211 112110
Q ss_pred CCceEEeecCCCcccccCC---CCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFP---RNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKC 203 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p---~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~ 203 (370)
+-.|..+ ++.+ ..| ++++|++++.. | + .++..||+.
T Consensus 123 -~v~~~~~---d~~~-~~~~~~~~~fD~V~~~~---~----~-----------------------------~~~~~~l~~ 161 (232)
T 3ntv_A 123 -QVRIIEG---NALE-QFENVNDKVYDMIFIDA---A----K-----------------------------AQSKKFFEI 161 (232)
T ss_dssp -TEEEEES---CGGG-CHHHHTTSCEEEEEEET---T----S-----------------------------SSHHHHHHH
T ss_pred -cEEEEEC---CHHH-HHHhhccCCccEEEEcC---c----H-----------------------------HHHHHHHHH
Confidence 2244444 5533 334 78999998542 1 1 012236777
Q ss_pred HHHhhccCceEEEEee
Q 017514 204 RSEELVAEGRMVLTFL 219 (370)
Q Consensus 204 Ra~EL~~GG~lvl~~~ 219 (370)
-.+-|+|||++++...
T Consensus 162 ~~~~LkpgG~lv~d~~ 177 (232)
T 3ntv_A 162 YTPLLKHQGLVITDNV 177 (232)
T ss_dssp HGGGEEEEEEEEEECT
T ss_pred HHHhcCCCeEEEEeeC
Confidence 7789999999988443
|
| >1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A | Back alignment and structure |
|---|
Probab=96.62 E-value=0.01 Score=52.92 Aligned_cols=104 Identities=14% Similarity=0.122 Sum_probs=58.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
...+|+|+|||+|..++.+. ++. + |.-+|+.-|.. +.......+...... +-
T Consensus 73 ~~~~vLDlG~G~G~~~~~la--------~~~---~---~~~~v~~vD~s-----------~~~~~~~~~~~~~~~---~v 124 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVS--------DIV---G---WEGKIFGIEFS-----------PRVLRELVPIVEERR---NI 124 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHH--------HHH---C---TTSEEEEEESC-----------HHHHHHHHHHHSSCT---TE
T ss_pred CCCEEEEEeccCCHHHHHHH--------HHh---C---CCeEEEEEECC-----------HHHHHHHHHHHhccC---CC
Confidence 34699999999999988776 322 1 23567777764 322112211111110 22
Q ss_pred eEEeecCCCcccc--c-CCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 130 CFFTGVPGSFYGR--L-FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 130 ~f~~~vpgSFy~~--l-~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
.|..+ ++... + .+++++|++++... .|. ....+|+.-.+
T Consensus 125 ~~~~~---d~~~~~~~~~~~~~~D~v~~~~~------~~~-----------------------------~~~~~l~~~~~ 166 (227)
T 1g8a_A 125 VPILG---DATKPEEYRALVPKVDVIFEDVA------QPT-----------------------------QAKILIDNAEV 166 (227)
T ss_dssp EEEEC---CTTCGGGGTTTCCCEEEEEECCC------STT-----------------------------HHHHHHHHHHH
T ss_pred EEEEc---cCCCcchhhcccCCceEEEECCC------CHh-----------------------------HHHHHHHHHHH
Confidence 44444 44331 1 23468999996533 111 01124666678
Q ss_pred hhccCceEEEEee
Q 017514 207 ELVAEGRMVLTFL 219 (370)
Q Consensus 207 EL~~GG~lvl~~~ 219 (370)
-|+|||++++.+.
T Consensus 167 ~LkpgG~l~~~~~ 179 (227)
T 1g8a_A 167 YLKRGGYGMIAVK 179 (227)
T ss_dssp HEEEEEEEEEEEE
T ss_pred hcCCCCEEEEEEe
Confidence 9999999999943
|
| >3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0064 Score=54.05 Aligned_cols=99 Identities=13% Similarity=-0.013 Sum_probs=58.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~ 126 (370)
..-+|+|+|||+|..++.+. +. ..+|+.-|+- +......++ ..+..-
T Consensus 55 ~~~~vLDlGcG~G~~~~~la--------~~---------~~~v~~vD~s-----------~~~~~~a~~~~~~~g~~~-- 104 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEWC--------LA---------GGRAITIEPR-----------ADRIENIQKNIDTYGLSP-- 104 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHH--------HT---------TCEEEEEESC-----------HHHHHHHHHHHHHTTCTT--
T ss_pred CCCEEEEecCCCCHHHHHHH--------Hc---------CCEEEEEeCC-----------HHHHHHHHHHHHHcCCCC--
Confidence 34799999999999988665 21 2567777774 322222111 112110
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
+-.|+. +++.+.+.+..++|++++..++ +.. +|+.-.+
T Consensus 105 -~v~~~~---~d~~~~~~~~~~~D~v~~~~~~-------------------------------------~~~-~l~~~~~ 142 (204)
T 3njr_A 105 -RMRAVQ---GTAPAALADLPLPEAVFIGGGG-------------------------------------SQA-LYDRLWE 142 (204)
T ss_dssp -TEEEEE---SCTTGGGTTSCCCSEEEECSCC-------------------------------------CHH-HHHHHHH
T ss_pred -CEEEEe---CchhhhcccCCCCCEEEECCcc-------------------------------------cHH-HHHHHHH
Confidence 123433 3664444444578888865432 111 4555567
Q ss_pred hhccCceEEEEeec
Q 017514 207 ELVAEGRMVLTFLG 220 (370)
Q Consensus 207 EL~~GG~lvl~~~g 220 (370)
-|+|||++++....
T Consensus 143 ~LkpgG~lv~~~~~ 156 (204)
T 3njr_A 143 WLAPGTRIVANAVT 156 (204)
T ss_dssp HSCTTCEEEEEECS
T ss_pred hcCCCcEEEEEecC
Confidence 89999999998753
|
| >2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0061 Score=53.94 Aligned_cols=77 Identities=12% Similarity=0.014 Sum_probs=43.3
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhh-CCCCCCCCc
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAAGQ 129 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~-~~~~~~~~~ 129 (370)
..+|+|+|||+|..++.++ .+ + . -+|+..|+- +...+..++.. .... .+-
T Consensus 55 ~~~vLDlgcG~G~~~~~l~--------~~----~---~-~~V~~vD~s-----------~~~l~~a~~~~~~~~~--~~v 105 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEAL--------SR----Y---A-AGATLIEMD-----------RAVSQQLIKNLATLKA--GNA 105 (202)
T ss_dssp TCEEEETTCTTCHHHHHHH--------HT----T---C-SEEEEECSC-----------HHHHHHHHHHHHHTTC--CSE
T ss_pred CCeEEEeCCCcCHHHHHHH--------hc----C---C-CEEEEEECC-----------HHHHHHHHHHHHHcCC--CcE
Confidence 3689999999999988655 21 1 1 378888875 33322222111 0100 022
Q ss_pred eEEeecCCCcccccC-CCCceeEEEeccccc
Q 017514 130 CFFTGVPGSFYGRLF-PRNSVHLFHSSYSLQ 159 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~-p~~sv~~~~S~~alh 159 (370)
.|+. ++..+-+. +++++|++++...+|
T Consensus 106 ~~~~---~D~~~~~~~~~~~fD~V~~~~p~~ 133 (202)
T 2fpo_A 106 RVVN---SNAMSFLAQKGTPHNIVFVDPPFR 133 (202)
T ss_dssp EEEC---SCHHHHHSSCCCCEEEEEECCSSS
T ss_pred EEEE---CCHHHHHhhcCCCCCEEEECCCCC
Confidence 3433 36544232 567899999875554
|
| >3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=96.58 E-value=0.02 Score=50.51 Aligned_cols=25 Identities=12% Similarity=0.026 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHhhccCceEEEEeec
Q 017514 196 DFSLFLKCRSEELVAEGRMVLTFLG 220 (370)
Q Consensus 196 D~~~fL~~Ra~EL~~GG~lvl~~~g 220 (370)
.....|+.=.+-|+|||.|++.++.
T Consensus 117 l~~~~l~~a~~~LkpGG~lv~k~~~ 141 (191)
T 3dou_A 117 IGQRVMEIAVRYLRNGGNVLLKQFQ 141 (191)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHccCCCEEEEEEcC
Confidence 3455677777889999999998764
|
| >1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0029 Score=53.38 Aligned_cols=19 Identities=26% Similarity=0.111 Sum_probs=16.3
Q ss_pred ceEEEeecCCCCcchHHHH
Q 017514 51 KVAIADLGCSSGPNTLLVA 69 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~ 69 (370)
.-+|+|+|||+|..++.+.
T Consensus 42 ~~~vLD~GcG~G~~~~~l~ 60 (171)
T 1ws6_A 42 RGRFLDPFAGSGAVGLEAA 60 (171)
T ss_dssp CCEEEEETCSSCHHHHHHH
T ss_pred CCeEEEeCCCcCHHHHHHH
Confidence 4689999999999887665
|
| >3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A* | Back alignment and structure |
|---|
Probab=96.47 E-value=0.00055 Score=61.88 Aligned_cols=80 Identities=20% Similarity=0.142 Sum_probs=50.9
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~~ 127 (370)
..+|+|+|||+|..++.+. +. ..+|+..|+- +........ ..+...
T Consensus 79 ~~~vLD~gcG~G~~~~~la--------~~---------~~~v~~vD~s-----------~~~~~~a~~~~~~~~~~~--- 127 (241)
T 3gdh_A 79 CDVVVDAFCGVGGNTIQFA--------LT---------GMRVIAIDID-----------PVKIALARNNAEVYGIAD--- 127 (241)
T ss_dssp CSEEEETTCTTSHHHHHHH--------HT---------TCEEEEEESC-----------HHHHHHHHHHHHHTTCGG---
T ss_pred CCEEEECccccCHHHHHHH--------Hc---------CCEEEEEECC-----------HHHHHHHHHHHHHcCCCc---
Confidence 4799999999999998776 22 1677888875 322222211 112100
Q ss_pred CceEEeecCCCcccccCCCCceeEEEeccccccccCCC
Q 017514 128 GQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVP 165 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P 165 (370)
+-.|+.+ ++.. +.|++++|++++...+||.....
T Consensus 128 ~~~~~~~---d~~~-~~~~~~~D~v~~~~~~~~~~~~~ 161 (241)
T 3gdh_A 128 KIEFICG---DFLL-LASFLKADVVFLSPPWGGPDYAT 161 (241)
T ss_dssp GEEEEES---CHHH-HGGGCCCSEEEECCCCSSGGGGG
T ss_pred CeEEEEC---ChHH-hcccCCCCEEEECCCcCCcchhh
Confidence 1234444 6643 44888999999999999977644
|
| >2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A* | Back alignment and structure |
|---|
Probab=96.45 E-value=0.013 Score=54.79 Aligned_cols=99 Identities=10% Similarity=-0.057 Sum_probs=60.8
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHh---hCCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQ---LGSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~---~~~~~~~~ 127 (370)
.-+|+|+|||+|..|+.+. +. + +. +|+..|+- +...+...+. .+..
T Consensus 126 ~~~VLDlgcG~G~~~~~la--------~~----~---~~-~V~~vD~s-----------~~~~~~a~~n~~~n~~~---- 174 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIA--------VY----G---KA-KVIAIEKD-----------PYTFKFLVENIHLNKVE---- 174 (278)
T ss_dssp TCEEEETTCTTTTTHHHHH--------HH----T---CC-EEEEECCC-----------HHHHHHHHHHHHHTTCT----
T ss_pred CCEEEEecccCCHHHHHHH--------Hh----C---CC-EEEEEECC-----------HHHHHHHHHHHHHcCCC----
Confidence 4689999999999998776 32 1 22 78888885 3322222211 1211
Q ss_pred Cce-EEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 128 GQC-FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 128 ~~~-f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
..+ |..| +.. .+.+++++|++++. .|... ..||..-.+
T Consensus 175 ~~v~~~~~---D~~-~~~~~~~fD~Vi~~--------~p~~~-----------------------------~~~l~~~~~ 213 (278)
T 2frn_A 175 DRMSAYNM---DNR-DFPGENIADRILMG--------YVVRT-----------------------------HEFIPKALS 213 (278)
T ss_dssp TTEEEECS---CTT-TCCCCSCEEEEEEC--------CCSSG-----------------------------GGGHHHHHH
T ss_pred ceEEEEEC---CHH-HhcccCCccEEEEC--------CchhH-----------------------------HHHHHHHHH
Confidence 223 5444 653 34448899999873 23211 125555567
Q ss_pred hhccCceEEEEeecc
Q 017514 207 ELVAEGRMVLTFLGR 221 (370)
Q Consensus 207 EL~~GG~lvl~~~g~ 221 (370)
-|+|||++++...+.
T Consensus 214 ~LkpgG~l~~~~~~~ 228 (278)
T 2frn_A 214 IAKDGAIIHYHNTVP 228 (278)
T ss_dssp HEEEEEEEEEEEEEE
T ss_pred HCCCCeEEEEEEeec
Confidence 899999999988764
|
| >1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A* | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0056 Score=58.44 Aligned_cols=113 Identities=12% Similarity=0.051 Sum_probs=65.6
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhh-----C-C
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-----G-S 122 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~-----~-~ 122 (370)
+.+.+|+|+|||+|..+..++ +. .+..+|..-|+- +...+..++.. + .
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~--------~~-------~~~~~v~~vDid-----------~~~i~~ar~~~~~~~~~~~ 129 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVL--------KH-------PTVEKAVMVDID-----------GELVEVAKRHMPEWHQGAF 129 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHT--------TS-------TTCCEEEEEESC-----------HHHHHHHHHHCHHHHTTGG
T ss_pred CCCCeEEEEcCCcCHHHHHHH--------hc-------CCCCEEEEEECC-----------HHHHHHHHHHhHhhccccc
Confidence 345799999999999887655 21 134678888874 22211111110 1 0
Q ss_pred -CCCCCCceEEeecCCCccccc-CCCCceeEEEecccccc-ccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHH
Q 017514 123 -ASGAAGQCFFTGVPGSFYGRL-FPRNSVHLFHSSYSLQW-LSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSL 199 (370)
Q Consensus 123 -~~~~~~~~f~~~vpgSFy~~l-~p~~sv~~~~S~~alhW-ls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~ 199 (370)
+. +--+..+ +..+-+ .+++++|++++....|| ++..+..+. ...
T Consensus 130 ~~~---~v~~~~~---D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~~~~l~---------------------------~~~ 176 (314)
T 1uir_A 130 DDP---RAVLVID---DARAYLERTEERYDVVIIDLTDPVGEDNPARLLY---------------------------TVE 176 (314)
T ss_dssp GCT---TEEEEES---CHHHHHHHCCCCEEEEEEECCCCBSTTCGGGGGS---------------------------SHH
T ss_pred cCC---ceEEEEc---hHHHHHHhcCCCccEEEECCCCcccccCcchhcc---------------------------HHH
Confidence 10 2234333 442222 15789999999988887 222111110 123
Q ss_pred HHHHHHHhhccCceEEEEeec
Q 017514 200 FLKCRSEELVAEGRMVLTFLG 220 (370)
Q Consensus 200 fL~~Ra~EL~~GG~lvl~~~g 220 (370)
|++.-.+-|+|||+|++....
T Consensus 177 ~l~~~~~~LkpgG~lv~~~~~ 197 (314)
T 1uir_A 177 FYRLVKAHLNPGGVMGMQTGM 197 (314)
T ss_dssp HHHHHHHTEEEEEEEEEEEEE
T ss_pred HHHHHHHhcCCCcEEEEEccC
Confidence 677778899999999998644
|
| >3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ... | Back alignment and structure |
|---|
Probab=96.40 E-value=0.0023 Score=57.27 Aligned_cols=34 Identities=15% Similarity=0.325 Sum_probs=25.6
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLP 98 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp 98 (370)
..+|+|+|||+|..|+.+. +.+ ++..+|+.-|+-
T Consensus 59 ~~~vLdiG~G~G~~~~~la--------~~~------~~~~~v~~vD~~ 92 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMA--------RLL------QPGARLLTMEIN 92 (221)
T ss_dssp CSEEEEECCTTSHHHHHHH--------TTS------CTTCEEEEEESC
T ss_pred CCEEEEECCCCCHHHHHHH--------HhC------CCCCEEEEEeCC
Confidence 4799999999999998776 211 134788888875
|
| >3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A* | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0052 Score=56.69 Aligned_cols=99 Identities=17% Similarity=0.122 Sum_probs=60.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~ 126 (370)
...+|+|+|||+|..++.+. ..+ |..+|+.-|.- +.......+ ..+..
T Consensus 80 ~~~~vLDiG~G~G~~~i~la--------~~~-------~~~~v~~vD~s-----------~~~~~~a~~~~~~~~l~--- 130 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLK--------IVR-------PELELVLVDAT-----------RKKVAFVERAIEVLGLK--- 130 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHH--------HHC-------TTCEEEEEESC-----------HHHHHHHHHHHHHHTCS---
T ss_pred CCCEEEEEcCCCCHHHHHHH--------HHC-------CCCEEEEEECC-----------HHHHHHHHHHHHHhCCC---
Confidence 46799999999999988765 221 45789999975 322222211 12221
Q ss_pred CCceEEeecCCCcccccC---CCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLF---PRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKC 203 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~---p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~ 203 (370)
+-.|+. ++..+-.. +++++|+++|... . ++..+++.
T Consensus 131 -~v~~~~---~d~~~~~~~~~~~~~fD~I~s~a~-------~------------------------------~~~~ll~~ 169 (249)
T 3g89_A 131 -GARALW---GRAEVLAREAGHREAYARAVARAV-------A------------------------------PLCVLSEL 169 (249)
T ss_dssp -SEEEEE---CCHHHHTTSTTTTTCEEEEEEESS-------C------------------------------CHHHHHHH
T ss_pred -ceEEEE---CcHHHhhcccccCCCceEEEECCc-------C------------------------------CHHHHHHH
Confidence 113333 35532221 2489999998431 0 22346777
Q ss_pred HHHhhccCceEEEEe
Q 017514 204 RSEELVAEGRMVLTF 218 (370)
Q Consensus 204 Ra~EL~~GG~lvl~~ 218 (370)
-.+=|+|||++++..
T Consensus 170 ~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 170 LLPFLEVGGAAVAMK 184 (249)
T ss_dssp HGGGEEEEEEEEEEE
T ss_pred HHHHcCCCeEEEEEe
Confidence 788999999998755
|
| >2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A* | Back alignment and structure |
|---|
Probab=96.37 E-value=0.016 Score=55.54 Aligned_cols=112 Identities=11% Similarity=0.012 Sum_probs=62.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCC---CCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGS---ASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~---~~~~ 126 (370)
.+.+|+|+|||+|..+..+. +. .|..+|..-|+- +...+..++.... .+..
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~--------~~-------~~~~~v~~vDis-----------~~~l~~ar~~~~~~~~~~~~ 169 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELC--------KY-------KSVENIDICEID-----------ETVIEVSKIYFKNISCGYED 169 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHT--------TC-------TTCCEEEEEESC-----------HHHHHHHHHHCTTTSGGGGS
T ss_pred CCCEEEEEcCCccHHHHHHH--------Hc-------CCCCEEEEEECC-----------HHHHHHHHHHHHhhccccCC
Confidence 45799999999999887655 21 134678888875 3332222221111 0000
Q ss_pred CCceEEeecCCCccccc-CCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRL-FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRS 205 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l-~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra 205 (370)
.+-.+..+ +..+-+ .+++++|++++...-+| -|.. . .| -..|++.-.
T Consensus 170 ~~v~~~~~---D~~~~l~~~~~~fDvIi~d~~~p~---~~~~------~-------------l~-------~~~~l~~~~ 217 (321)
T 2pt6_A 170 KRVNVFIE---DASKFLENVTNTYDVIIVDSSDPI---GPAE------T-------------LF-------NQNFYEKIY 217 (321)
T ss_dssp TTEEEEES---CHHHHHHHCCSCEEEEEEECCCSS---SGGG------G-------------GS-------SHHHHHHHH
T ss_pred CcEEEEEc---cHHHHHhhcCCCceEEEECCcCCC---Ccch------h-------------hh-------HHHHHHHHH
Confidence 02233333 443222 14678999998654333 1110 0 00 034677778
Q ss_pred HhhccCceEEEEee
Q 017514 206 EELVAEGRMVLTFL 219 (370)
Q Consensus 206 ~EL~~GG~lvl~~~ 219 (370)
+-|+|||++++...
T Consensus 218 ~~LkpgG~lv~~~~ 231 (321)
T 2pt6_A 218 NALKPNGYCVAQCE 231 (321)
T ss_dssp HHEEEEEEEEEEEC
T ss_pred HhcCCCcEEEEEcC
Confidence 89999999999853
|
| >2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54 | Back alignment and structure |
|---|
Probab=96.27 E-value=0.02 Score=52.03 Aligned_cols=34 Identities=12% Similarity=0.072 Sum_probs=25.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLP 98 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp 98 (370)
...+|+|+|||+|..++.+. +++ |..+|+.-|+-
T Consensus 65 ~~~~vLDlG~G~G~~~~~la--------~~~-------~~~~v~gvD~s 98 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLG--------ATL-------NGWYFLATEVD 98 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHH--------HHH-------HCCEEEEEESC
T ss_pred CCCEEEEeCCChhHHHHHHH--------HhC-------CCCeEEEEECC
Confidence 45699999999999988765 222 23678888874
|
| >1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38 | Back alignment and structure |
|---|
Probab=96.26 E-value=0.018 Score=54.79 Aligned_cols=125 Identities=14% Similarity=0.049 Sum_probs=66.7
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~~ 127 (370)
..+|+|+|||+|..|+.+. +.. .+..+|+..|+- +.......+ ..+..
T Consensus 119 g~~VLDlg~G~G~~t~~la--------~~~------~~~~~v~avD~s-----------~~~l~~a~~~~~~~g~~---- 169 (315)
T 1ixk_A 119 GEIVADMAAAPGGKTSYLA--------QLM------RNDGVIYAFDVD-----------ENRLRETRLNLSRLGVL---- 169 (315)
T ss_dssp TCEEEECCSSCSHHHHHHH--------HHT------TTCSEEEEECSC-----------HHHHHHHHHHHHHHTCC----
T ss_pred CCEEEEeCCCCCHHHHHHH--------HHh------CCCCEEEEEcCC-----------HHHHHHHHHHHHHhCCC----
Confidence 4699999999999998766 321 124678888875 222221111 11321
Q ss_pred CceEEeecCCCcccccCCCCceeEEEecc---ccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017514 128 GQCFFTGVPGSFYGRLFPRNSVHLFHSSY---SLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCR 204 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~p~~sv~~~~S~~---alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~R 204 (370)
+-.++. +++..-..+++++|.+++.. .+.-+.+.|+... ..++..+ ....+....+|+.=
T Consensus 170 ~v~~~~---~D~~~~~~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~---------~~~~~~~-----~~~~~~q~~~L~~~ 232 (315)
T 1ixk_A 170 NVILFH---SSSLHIGELNVEFDKILLDAPCTGSGTIHKNPERKW---------NRTMDDI-----KFCQGLQMRLLEKG 232 (315)
T ss_dssp SEEEES---SCGGGGGGGCCCEEEEEEECCTTSTTTCC-----------------CCHHHH-----HHHHHHHHHHHHHH
T ss_pred eEEEEE---CChhhcccccccCCEEEEeCCCCCcccccCChhHhh---------cCCHHHH-----HHHHHHHHHHHHHH
Confidence 113333 35522222467899998731 2222223343111 0111222 22233446688888
Q ss_pred HHhhccCceEEEEeecc
Q 017514 205 SEELVAEGRMVLTFLGR 221 (370)
Q Consensus 205 a~EL~~GG~lvl~~~g~ 221 (370)
++-|+|||+|++.....
T Consensus 233 ~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 233 LEVLKPGGILVYSTCSL 249 (315)
T ss_dssp HHHEEEEEEEEEEESCC
T ss_pred HHhCCCCCEEEEEeCCC
Confidence 89999999999977643
|
| >3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=96.22 E-value=0.0057 Score=55.33 Aligned_cols=34 Identities=9% Similarity=-0.044 Sum_probs=25.6
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLP 98 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp 98 (370)
.-+|+|+|||+|..|+.+. +.+ ++.-+|+.-|+-
T Consensus 57 ~~~vLdiG~G~G~~~~~la--------~~~------~~~~~v~~vD~~ 90 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYIL--------NGL------ADNTTLTCIDPE 90 (221)
T ss_dssp CCEEEEESTTHHHHHHHHH--------HHS------CTTSEEEEECSC
T ss_pred CCCEEEEcCCchHHHHHHH--------HhC------CCCCEEEEEECC
Confidence 3489999999999999776 321 134788888875
|
| >1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A | Back alignment and structure |
|---|
Probab=96.17 E-value=0.016 Score=57.57 Aligned_cols=126 Identities=17% Similarity=0.142 Sum_probs=71.4
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCce
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (370)
..+|+|+|||+|..|..+. +.. +..+|+.+|.-..=...+-+.+ +..+. ...
T Consensus 247 g~~VLDlgaG~G~~t~~la--------~~~-------~~~~v~a~D~~~~~l~~~~~~~--------~~~g~-----~~~ 298 (429)
T 1sqg_A 247 GEHILDLCAAPGGKTTHIL--------EVA-------PEAQVVAVDIDEQRLSRVYDNL--------KRLGM-----KAT 298 (429)
T ss_dssp TCEEEEESCTTCHHHHHHH--------HHC-------TTCEEEEEESSTTTHHHHHHHH--------HHTTC-----CCE
T ss_pred cCeEEEECCCchHHHHHHH--------HHc-------CCCEEEEECCCHHHHHHHHHHH--------HHcCC-----CeE
Confidence 4699999999999998776 321 2368888897532222221111 11122 123
Q ss_pred EEeecCCCcccc--cCCCCceeEEEe---ccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 131 FFTGVPGSFYGR--LFPRNSVHLFHS---SYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRS 205 (370)
Q Consensus 131 f~~~vpgSFy~~--l~p~~sv~~~~S---~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra 205 (370)
+..+ ++..- .++++++|.+++ .+.+..+.+.|+... . .++..+ ....+....+|+.=.
T Consensus 299 ~~~~---D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~--------~-~~~~~~-----~~l~~~q~~~L~~a~ 361 (429)
T 1sqg_A 299 VKQG---DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKW--------L-RRDRDI-----PELAQLQSEILDAIW 361 (429)
T ss_dssp EEEC---CTTCTHHHHTTCCEEEEEEECCCCCGGGTTTCTTHHH--------H-CCTTHH-----HHHHHHHHHHHHHHG
T ss_pred EEeC---chhhchhhcccCCCCEEEEeCCCCcccccCCCcchhh--------c-CCHHHH-----HHHHHHHHHHHHHHH
Confidence 3333 44221 256689999997 344555555554211 0 011121 122233355788888
Q ss_pred HhhccCceEEEEeecc
Q 017514 206 EELVAEGRMVLTFLGR 221 (370)
Q Consensus 206 ~EL~~GG~lvl~~~g~ 221 (370)
+-|+|||+|+++.+..
T Consensus 362 ~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 362 PHLKTGGTLVYATCSV 377 (429)
T ss_dssp GGEEEEEEEEEEESCC
T ss_pred HhcCCCCEEEEEECCC
Confidence 8999999999988654
|
| >2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A* | Back alignment and structure |
|---|
Probab=96.17 E-value=0.027 Score=53.45 Aligned_cols=108 Identities=12% Similarity=0.100 Sum_probs=59.4
Q ss_pred CceEEEeecCCCCcch--HHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCC
Q 017514 50 TKVAIADLGCSSGPNT--LLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAA 127 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns--~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~ 127 (370)
...+|+|+|||+|.+. =. .+ +.++. ++.-+|+-.|+-.. ++
T Consensus 63 ~g~~VLDLGcGsg~~~GpGs---~~---~a~~~------~~~~~V~gvDis~~--------v~----------------- 105 (290)
T 2xyq_A 63 YNMRVIHFGAGSDKGVAPGT---AV---LRQWL------PTGTLLVDSDLNDF--------VS----------------- 105 (290)
T ss_dssp TTCEEEEESCCCTTSBCHHH---HH---HHHHS------CTTCEEEEEESSCC--------BC-----------------
T ss_pred CCCEEEEeCCCCCCCCCcHH---HH---HHHHc------CCCCEEEEEECCCC--------CC-----------------
Confidence 4579999999885553 11 11 11221 12467888888532 10
Q ss_pred CceE-EeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 128 GQCF-FTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 128 ~~~f-~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
+-.| +.| +..+ +.+++++|+++|..+.+|.-... .++.. .. ..+..+|+.-.+
T Consensus 106 ~v~~~i~g---D~~~-~~~~~~fD~Vvsn~~~~~~g~~~---~d~~~--------~~-----------~l~~~~l~~a~r 159 (290)
T 2xyq_A 106 DADSTLIG---DCAT-VHTANKWDLIISDMYDPRTKHVT---KENDS--------KE-----------GFFTYLCGFIKQ 159 (290)
T ss_dssp SSSEEEES---CGGG-CCCSSCEEEEEECCCCCC---CC---SCCCC--------CC-----------THHHHHHHHHHH
T ss_pred CCEEEEEC---cccc-CCccCcccEEEEcCCcccccccc---ccccc--------hH-----------HHHHHHHHHHHH
Confidence 1234 333 5533 33347899999987655521100 01000 00 123456777788
Q ss_pred hhccCceEEEEeec
Q 017514 207 ELVAEGRMVLTFLG 220 (370)
Q Consensus 207 EL~~GG~lvl~~~g 220 (370)
-|+|||+|++..+.
T Consensus 160 ~LkpGG~~v~~~~~ 173 (290)
T 2xyq_A 160 KLALGGSIAVKITE 173 (290)
T ss_dssp HEEEEEEEEEEECS
T ss_pred hcCCCcEEEEEEec
Confidence 99999999997653
|
| >3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=96.14 E-value=0.019 Score=50.86 Aligned_cols=34 Identities=12% Similarity=0.163 Sum_probs=25.4
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLP 98 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp 98 (370)
..+|+|+|||+|..|+.+. +. -++..+|+.-|.-
T Consensus 65 ~~~vLdiG~G~G~~~~~la--------~~------~~~~~~v~~vD~~ 98 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMG--------LA------LPKDGTLITCDVD 98 (225)
T ss_dssp CSEEEEECCTTSHHHHHHH--------TT------CCTTCEEEEEESC
T ss_pred CCEEEEeCCcchHHHHHHH--------Hh------CCCCCEEEEEeCC
Confidence 4699999999999988766 22 1125788888875
|
| >3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A* | Back alignment and structure |
|---|
Probab=96.11 E-value=0.0085 Score=55.79 Aligned_cols=95 Identities=14% Similarity=0.095 Sum_probs=60.0
Q ss_pred hHHHHHHHHHhhcccCCCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHH
Q 017514 32 AKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLAS 111 (370)
Q Consensus 32 ~~~~l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~ 111 (370)
.+|.++.--..+... +.+-+|+|+|||.|+.++..+ |...+...|+- +.
T Consensus 89 rLp~ld~fY~~i~~~--~~p~~VLDlGCG~gpLal~~~------------------~~~~y~a~DId-----------~~ 137 (253)
T 3frh_A 89 RLAELDTLYDFIFSA--ETPRRVLDIACGLNPLALYER------------------GIASVWGCDIH-----------QG 137 (253)
T ss_dssp HGGGHHHHHHHHTSS--CCCSEEEEETCTTTHHHHHHT------------------TCSEEEEEESB-----------HH
T ss_pred HhhhHHHHHHHHhcC--CCCCeEEEecCCccHHHHHhc------------------cCCeEEEEeCC-----------HH
Confidence 345555444433332 457899999999998887554 35888888885 43
Q ss_pred HHHHHHHh---hCCCCCCCCceEEeecCCCcccccCCCCceeEEEeccccccccCCCC
Q 017514 112 FQKILRKQ---LGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPD 166 (370)
Q Consensus 112 ~~~~~~~~---~~~~~~~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~ 166 (370)
.-+..... .+. +-.|..+ ++.... |+.+.|++.++=++|-|.+-..
T Consensus 138 ~i~~ar~~~~~~g~-----~~~~~v~---D~~~~~-~~~~~DvvLllk~lh~LE~q~~ 186 (253)
T 3frh_A 138 LGDVITPFAREKDW-----DFTFALQ---DVLCAP-PAEAGDLALIFKLLPLLEREQA 186 (253)
T ss_dssp HHHHHHHHHHHTTC-----EEEEEEC---CTTTSC-CCCBCSEEEEESCHHHHHHHST
T ss_pred HHHHHHHHHHhcCC-----CceEEEe---ecccCC-CCCCcchHHHHHHHHHhhhhch
Confidence 33332221 121 2234333 554455 5559999999999999977554
|
| >2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=96.10 E-value=0.01 Score=53.66 Aligned_cols=19 Identities=26% Similarity=0.382 Sum_probs=16.8
Q ss_pred ceEEEeecCCCCcchHHHH
Q 017514 51 KVAIADLGCSSGPNTLLVA 69 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~ 69 (370)
..+|+|+|||+|..++.+.
T Consensus 61 ~~~VLdiG~G~G~~~~~la 79 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFA 79 (239)
T ss_dssp CSEEEEECCTTCHHHHHHH
T ss_pred cCEEEEEeCCCCHHHHHHH
Confidence 4699999999999998776
|
| >2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A* | Back alignment and structure |
|---|
Probab=96.09 E-value=0.0063 Score=55.51 Aligned_cols=19 Identities=21% Similarity=0.293 Sum_probs=16.5
Q ss_pred ceEEEeecCCCCcchHHHH
Q 017514 51 KVAIADLGCSSGPNTLLVA 69 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~ 69 (370)
.-+|+|+|||+|..|+.+.
T Consensus 82 ~~~VLDiG~GtG~~t~~la 100 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFR 100 (236)
T ss_dssp CSEEEEECCTTSHHHHHHH
T ss_pred CCEEEEEeCCCCHHHHHHH
Confidence 3599999999999998766
|
| >1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A | Back alignment and structure |
|---|
Probab=96.08 E-value=0.024 Score=54.76 Aligned_cols=109 Identities=14% Similarity=0.043 Sum_probs=62.4
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhh-----CC-
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-----GS- 122 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~-----~~- 122 (370)
+.+.+|+|+|||+|..+..+. +. .|..+|+.-|+- +......++.. +-
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la--------~~-------~~~~~V~~VDis-----------~~~l~~Ar~~~~~~~~gl~ 172 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVA--------RH-------ASIEQIDMCEID-----------KMVVDVSKQFFPDVAIGYE 172 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHT--------TC-------TTCCEEEEEESC-----------HHHHHHHHHHCHHHHGGGG
T ss_pred CCCCEEEEECCCccHHHHHHH--------Hc-------CCCCEEEEEECC-----------HHHHHHHHHHHHhhccccC
Confidence 456799999999999887655 21 244688888875 22211111110 10
Q ss_pred CCCCCCceEEeecCCCccccc--CCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHH
Q 017514 123 ASGAAGQCFFTGVPGSFYGRL--FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLF 200 (370)
Q Consensus 123 ~~~~~~~~f~~~vpgSFy~~l--~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~f 200 (370)
+. +--+..+ +...-+ ++++++|++++....+|- .+..+ ....|
T Consensus 173 ~~---rv~~~~~---D~~~~l~~~~~~~fDlIi~d~~~p~~--~~~~l---------------------------~~~~~ 217 (334)
T 1xj5_A 173 DP---RVNLVIG---DGVAFLKNAAEGSYDAVIVDSSDPIG--PAKEL---------------------------FEKPF 217 (334)
T ss_dssp ST---TEEEEES---CHHHHHHTSCTTCEEEEEECCCCTTS--GGGGG---------------------------GSHHH
T ss_pred CC---cEEEEEC---CHHHHHHhccCCCccEEEECCCCccC--cchhh---------------------------hHHHH
Confidence 00 2234333 543322 356899999996653331 01100 01336
Q ss_pred HHHHHHhhccCceEEEEe
Q 017514 201 LKCRSEELVAEGRMVLTF 218 (370)
Q Consensus 201 L~~Ra~EL~~GG~lvl~~ 218 (370)
++.-.+-|+|||+|++..
T Consensus 218 l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 218 FQSVARALRPGGVVCTQA 235 (334)
T ss_dssp HHHHHHHEEEEEEEEEEC
T ss_pred HHHHHHhcCCCcEEEEec
Confidence 777788899999999874
|
| >2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus} | Back alignment and structure |
|---|
Probab=95.97 E-value=0.04 Score=51.37 Aligned_cols=20 Identities=30% Similarity=0.509 Sum_probs=17.0
Q ss_pred CceEEEeecCCCCcchHHHH
Q 017514 50 TKVAIADLGCSSGPNTLLVA 69 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~ 69 (370)
...+|+|+|||+|..|..+.
T Consensus 74 ~g~~VLDlGcGtG~~s~~la 93 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAA 93 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHH
T ss_pred CCCEEEEeCcCCCHHHHHHH
Confidence 35799999999999887666
|
| >3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.92 E-value=0.023 Score=54.69 Aligned_cols=113 Identities=19% Similarity=0.081 Sum_probs=66.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~ 126 (370)
...+|+|+|||+|..++.+. ... + |...++..|.- +........ ..+..
T Consensus 203 ~~~~vLD~gcGsG~~~ie~a--------~~~---~---~~~~v~g~Di~-----------~~~i~~a~~n~~~~g~~--- 254 (354)
T 3tma_A 203 PGMRVLDPFTGSGTIALEAA--------STL---G---PTSPVYAGDLD-----------EKRLGLAREAALASGLS--- 254 (354)
T ss_dssp TTCCEEESSCTTSHHHHHHH--------HHH---C---TTSCEEEEESC-----------HHHHHHHHHHHHHTTCT---
T ss_pred CCCEEEeCCCCcCHHHHHHH--------Hhh---C---CCceEEEEECC-----------HHHHHHHHHHHHHcCCC---
Confidence 34689999999999887665 221 1 34778888875 332222211 11210
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
.-.|..+ ++.+-..|.+++|+++++--.+|... ..... ......+++.-.+
T Consensus 255 -~i~~~~~---D~~~~~~~~~~~D~Ii~npPyg~r~~-----------------~~~~~--------~~~~~~~~~~~~~ 305 (354)
T 3tma_A 255 -WIRFLRA---DARHLPRFFPEVDRILANPPHGLRLG-----------------RKEGL--------FHLYWDFLRGALA 305 (354)
T ss_dssp -TCEEEEC---CGGGGGGTCCCCSEEEECCCSCC---------------------CHHH--------HHHHHHHHHHHHH
T ss_pred -ceEEEeC---ChhhCccccCCCCEEEECCCCcCccC-----------------CcccH--------HHHHHHHHHHHHH
Confidence 1234443 66444456677899998754443110 01122 2344568888889
Q ss_pred hhccCceEEEEee
Q 017514 207 ELVAEGRMVLTFL 219 (370)
Q Consensus 207 EL~~GG~lvl~~~ 219 (370)
-|+|||++++...
T Consensus 306 ~LkpgG~l~i~t~ 318 (354)
T 3tma_A 306 LLPPGGRVALLTL 318 (354)
T ss_dssp TSCTTCEEEEEES
T ss_pred hcCCCcEEEEEeC
Confidence 9999999999864
|
| >2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A* | Back alignment and structure |
|---|
Probab=95.89 E-value=0.023 Score=53.28 Aligned_cols=111 Identities=11% Similarity=0.011 Sum_probs=62.8
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCC---CCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGS---ASG 125 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~---~~~ 125 (370)
+++.+|+|+|||+|..+..+. +. .|..+|..-|+- +...+..++.... .+.
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~--------~~-------~~~~~v~~vDid-----------~~~i~~a~~~~~~~~~~~~ 130 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELC--------KY-------KSVENIDICEID-----------ETVIEVSKIYFKNISCGYE 130 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHT--------TC-------TTCCEEEEEESC-----------HHHHHHHHHHCTTTSGGGG
T ss_pred CCCCeEEEEeCCcCHHHHHHH--------Hc-------CCCCEEEEEECC-----------HHHHHHHHHHhHHhccccC
Confidence 456799999999999877654 21 134678888874 3322222221110 000
Q ss_pred CCCceEEeecCCCcccccC-CCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHH--HHHHH
Q 017514 126 AAGQCFFTGVPGSFYGRLF-PRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDF--SLFLK 202 (370)
Q Consensus 126 ~~~~~f~~~vpgSFy~~l~-p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~--~~fL~ 202 (370)
..+--+..+ +..+-+. .++++|++++....+|. |. .++ ..|++
T Consensus 131 ~~~v~~~~~---D~~~~l~~~~~~fD~Ii~d~~~~~~---~~----------------------------~~l~~~~~l~ 176 (283)
T 2i7c_A 131 DKRVNVFIE---DASKFLENVTNTYDVIIVDSSDPIG---PA----------------------------ETLFNQNFYE 176 (283)
T ss_dssp STTEEEEES---CHHHHHHHCCSCEEEEEEECCCTTT---GG----------------------------GGGSSHHHHH
T ss_pred CCcEEEEEC---ChHHHHHhCCCCceEEEEcCCCCCC---cc----------------------------hhhhHHHHHH
Confidence 002233333 4322221 26789999987655551 21 011 23777
Q ss_pred HHHHhhccCceEEEEee
Q 017514 203 CRSEELVAEGRMVLTFL 219 (370)
Q Consensus 203 ~Ra~EL~~GG~lvl~~~ 219 (370)
.-.+-|+|||+|++...
T Consensus 177 ~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 177 KIYNALKPNGYCVAQCE 193 (283)
T ss_dssp HHHHHEEEEEEEEEECC
T ss_pred HHHHhcCCCcEEEEECC
Confidence 77889999999998853
|
| >2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=95.87 E-value=0.065 Score=47.94 Aligned_cols=98 Identities=15% Similarity=0.213 Sum_probs=57.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~ 126 (370)
...+|+|+|||+|..++.+.+ . ..+|+..|.- +.......+ ..+...
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~--------~---------~~~v~~vD~~-----------~~~~~~a~~~~~~~~~~~-- 140 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSE--------V---------AGEVWTFEAV-----------EEFYKTAQKNLKKFNLGK-- 140 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHH--------H---------SSEEEEECSC-----------HHHHHHHHHHHHHTTCCT--
T ss_pred CCCEEEEeCCCccHHHHHHHH--------h---------CCEEEEEecC-----------HHHHHHHHHHHHHcCCCC--
Confidence 346999999999998887662 1 1567777764 222111111 112110
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
+-.+ +.+++.+.+++++++|++++. .|. +. .+|+.-.+
T Consensus 141 -~~~~---~~~d~~~~~~~~~~~D~v~~~--------~~~---------------~~---------------~~l~~~~~ 178 (248)
T 2yvl_A 141 -NVKF---FNVDFKDAEVPEGIFHAAFVD--------VRE---------------PW---------------HYLEKVHK 178 (248)
T ss_dssp -TEEE---ECSCTTTSCCCTTCBSEEEEC--------SSC---------------GG---------------GGHHHHHH
T ss_pred -cEEE---EEcChhhcccCCCcccEEEEC--------CcC---------------HH---------------HHHHHHHH
Confidence 2233 334665543377899999972 221 00 13555567
Q ss_pred hhccCceEEEEee
Q 017514 207 ELVAEGRMVLTFL 219 (370)
Q Consensus 207 EL~~GG~lvl~~~ 219 (370)
-|+|||++++...
T Consensus 179 ~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 179 SLMEGAPVGFLLP 191 (248)
T ss_dssp HBCTTCEEEEEES
T ss_pred HcCCCCEEEEEeC
Confidence 8999999999875
|
| >2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A* | Back alignment and structure |
|---|
Probab=95.85 E-value=0.022 Score=53.56 Aligned_cols=20 Identities=35% Similarity=0.614 Sum_probs=17.1
Q ss_pred CceEEEeecCCCCcchHHHH
Q 017514 50 TKVAIADLGCSSGPNTLLVA 69 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~ 69 (370)
...+|+|+|||+|..|..+.
T Consensus 82 ~g~~VLDlGcGtG~~s~~la 101 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAA 101 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHH
T ss_pred CCCEEEEeccCCCHHHHHHH
Confidence 35799999999999888766
|
| >2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A* | Back alignment and structure |
|---|
Probab=95.79 E-value=0.0059 Score=58.25 Aligned_cols=19 Identities=26% Similarity=0.546 Sum_probs=16.8
Q ss_pred ceEEEeecCCCCcchHHHH
Q 017514 51 KVAIADLGCSSGPNTLLVA 69 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~ 69 (370)
..+|+|+|||+|..|..+.
T Consensus 83 g~~VLDlGcG~G~~s~~la 101 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCG 101 (305)
T ss_dssp CEEEEEETCTTSHHHHHHH
T ss_pred CCEEEEEcCCCCHHHHHHH
Confidence 4799999999999988776
|
| >3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A | Back alignment and structure |
|---|
Probab=95.79 E-value=0.015 Score=54.15 Aligned_cols=122 Identities=10% Similarity=0.035 Sum_probs=64.4
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~~ 127 (370)
..+|+|+|||+|..|..+. +.. +...+|+..|+- +.......+ ..+..
T Consensus 84 g~~VLDlgaG~G~~t~~la--------~~~------~~~~~v~avD~~-----------~~~l~~~~~~~~~~g~~---- 134 (274)
T 3ajd_A 84 DDFILDMCAAPGGKTTHLA--------QLM------KNKGTIVAVEIS-----------KTRTKALKSNINRMGVL---- 134 (274)
T ss_dssp TCEEEETTCTTCHHHHHHH--------HHT------TTCSEEEEEESC-----------HHHHHHHHHHHHHTTCC----
T ss_pred cCEEEEeCCCccHHHHHHH--------HHc------CCCCEEEEECCC-----------HHHHHHHHHHHHHhCCC----
Confidence 4699999999999998766 221 123678888875 222222211 11211
Q ss_pred CceEEeecCCCcccccC----CCCceeEEEecc---ccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHH
Q 017514 128 GQCFFTGVPGSFYGRLF----PRNSVHLFHSSY---SLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLF 200 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~----p~~sv~~~~S~~---alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~f 200 (370)
+-.++. +++..-.. +.+++|.+++.. .+..+.+.|. .++. -.....++...+
T Consensus 135 ~v~~~~---~D~~~~~~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~-------------~~~~-----~~~~~~~~~~~~ 193 (274)
T 3ajd_A 135 NTIIIN---ADMRKYKDYLLKNEIFFDKILLDAPCSGNIIKDKNRN-------------VSEE-----DIKYCSLRQKEL 193 (274)
T ss_dssp SEEEEE---SCHHHHHHHHHHTTCCEEEEEEEECCC-------------------------HH-----HHTGGGTCHHHH
T ss_pred cEEEEe---CChHhcchhhhhccccCCEEEEcCCCCCCcccccCCC-------------CCHH-----HHHHHHHHHHHH
Confidence 122333 35422111 267899998742 2222222220 0000 111222445678
Q ss_pred HHHHHHhhccCceEEEEeeccC
Q 017514 201 LKCRSEELVAEGRMVLTFLGRK 222 (370)
Q Consensus 201 L~~Ra~EL~~GG~lvl~~~g~~ 222 (370)
|+.=.+-|+|||+|+++.....
T Consensus 194 l~~~~~~LkpgG~lv~stcs~~ 215 (274)
T 3ajd_A 194 IDIGIDLLKKDGELVYSTCSME 215 (274)
T ss_dssp HHHHHHHEEEEEEEEEEESCCC
T ss_pred HHHHHHhCCCCCEEEEEECCCC
Confidence 8888899999999999887543
|
| >2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A* | Back alignment and structure |
|---|
Probab=95.77 E-value=0.019 Score=54.61 Aligned_cols=110 Identities=14% Similarity=0.077 Sum_probs=60.4
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhh-----CC-
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-----GS- 122 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~-----~~- 122 (370)
+.+.+|+|+|||+|..+..++ ++ .|..+|..-|+- +...+..++.. +.
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~--------~~-------~~~~~v~~vDid-----------~~~i~~ar~~~~~~~~~~~ 147 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVV--------KH-------PSVESVVQCEID-----------EDVIQVSKKFLPGMAIGYS 147 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHT--------TC-------TTCCEEEEEESC-----------HHHHHHHHHHCHHHHGGGG
T ss_pred CCCCEEEEECCCchHHHHHHH--------Hc-------CCCCEEEEEECC-----------HHHHHHHHHHhHHhhcccC
Confidence 456799999999999887665 21 134678888874 22211111110 10
Q ss_pred CCCCCCceEEeecCCCccccc-CCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHH
Q 017514 123 ASGAAGQCFFTGVPGSFYGRL-FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFL 201 (370)
Q Consensus 123 ~~~~~~~~f~~~vpgSFy~~l-~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL 201 (370)
.. +--+..+ +..+-| .+++++|++++....||- |... .....|+
T Consensus 148 ~~---rv~v~~~---Da~~~l~~~~~~fD~Ii~d~~~~~~---~~~~--------------------------l~~~~~l 192 (304)
T 2o07_A 148 SS---KLTLHVG---DGFEFMKQNQDAFDVIITDSSDPMG---PAES--------------------------LFKESYY 192 (304)
T ss_dssp CT---TEEEEES---CHHHHHHTCSSCEEEEEEECC----------------------------------------CHHH
T ss_pred CC---cEEEEEC---cHHHHHhhCCCCceEEEECCCCCCC---cchh--------------------------hhHHHHH
Confidence 10 2233333 442222 146789999997655541 2100 0112367
Q ss_pred HHHHHhhccCceEEEEee
Q 017514 202 KCRSEELVAEGRMVLTFL 219 (370)
Q Consensus 202 ~~Ra~EL~~GG~lvl~~~ 219 (370)
+.-.+-|+|||+|++...
T Consensus 193 ~~~~~~LkpgG~lv~~~~ 210 (304)
T 2o07_A 193 QLMKTALKEDGVLCCQGE 210 (304)
T ss_dssp HHHHHHEEEEEEEEEEEE
T ss_pred HHHHhccCCCeEEEEecC
Confidence 777889999999999764
|
| >3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=95.76 E-value=0.015 Score=53.27 Aligned_cols=34 Identities=21% Similarity=0.218 Sum_probs=24.9
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLP 98 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp 98 (370)
.-+|+|+|||+|..|+.+. +.+ ++..+|+.-|+-
T Consensus 61 ~~~VLDiG~G~G~~t~~la--------~~~------~~~~~v~~iD~~ 94 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMS--------LAL------PDDGQVITCDIN 94 (242)
T ss_dssp CSEEEEEESCCSHHHHHHH--------HTS------CTTCEEEEEECC
T ss_pred cCEEEEeeCCcCHHHHHHH--------HhC------CCCCEEEEEECC
Confidence 4699999999999999776 321 124677777764
|
| >3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=95.74 E-value=0.043 Score=55.60 Aligned_cols=77 Identities=14% Similarity=0.181 Sum_probs=42.6
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCce
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (370)
..+|+|+|||+|..++.+. +. +..+|+.-|+. ........ .. ...+.. .+-.
T Consensus 159 ~~~VLDiGcGtG~la~~la--------~~--------~~~~V~gvD~s-----~~l~~A~~---~~-~~~gl~---~~v~ 210 (480)
T 3b3j_A 159 DKIVLDVGCGSGILSFFAA--------QA--------GARKIYAVEAS-----TMAQHAEV---LV-KSNNLT---DRIV 210 (480)
T ss_dssp TCEEEEESCSTTHHHHHHH--------HT--------TCSEEEEEECH-----HHHHHHHH---HH-HHTTCT---TTEE
T ss_pred CCEEEEecCcccHHHHHHH--------Hc--------CCCEEEEEEcH-----HHHHHHHH---HH-HHcCCC---CcEE
Confidence 4699999999998776544 21 33688888874 11111111 11 111211 0223
Q ss_pred EEeecCCCcccccCCCCceeEEEeccccc
Q 017514 131 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQ 159 (370)
Q Consensus 131 f~~~vpgSFy~~l~p~~sv~~~~S~~alh 159 (370)
|+. +++.+ +-+++++|+++|...++
T Consensus 211 ~~~---~d~~~-~~~~~~fD~Ivs~~~~~ 235 (480)
T 3b3j_A 211 VIP---GKVEE-VSLPEQVDIIISEPMGY 235 (480)
T ss_dssp EEE---SCTTT-CCCSSCEEEEECCCCHH
T ss_pred EEE---Cchhh-CccCCCeEEEEEeCchH
Confidence 433 35533 33346899999976633
|
| >2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17 | Back alignment and structure |
|---|
Probab=95.72 E-value=0.022 Score=54.54 Aligned_cols=111 Identities=14% Similarity=0.080 Sum_probs=59.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCC---CCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGS---ASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~---~~~~ 126 (370)
.+.+|+|+|||+|..+..++ +. .|..+|..-|+- +...+..++.... .+..
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~--------~~-------~~~~~v~~vDid-----------~~~i~~Ar~~~~~~~~~~~~ 161 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVL--------KH-------ESVEKVTMCEID-----------EMVIDVAKKFLPGMSCGFSH 161 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHT--------TC-------TTCCEEEEECSC-----------HHHHHHHHHHCTTTSGGGGC
T ss_pred CCCEEEEEcCCcCHHHHHHH--------Hc-------CCCCEEEEEECC-----------HHHHHHHHHHHHHhccccCC
Confidence 45799999999999887655 21 244678888875 3332222221110 0000
Q ss_pred CCceEEeecCCCcccccC-CCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLF-PRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRS 205 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~-p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra 205 (370)
.+--+.. ++...-+- +++++|++++...-|| .|.. ..|. ..|++.-.
T Consensus 162 ~rv~~~~---~D~~~~l~~~~~~fD~Ii~d~~~~~---~~~~-------------------~l~t-------~~~l~~~~ 209 (314)
T 2b2c_A 162 PKLDLFC---GDGFEFLKNHKNEFDVIITDSSDPV---GPAE-------------------SLFG-------QSYYELLR 209 (314)
T ss_dssp TTEEEEC---SCHHHHHHHCTTCEEEEEECCC------------------------------------------HHHHHH
T ss_pred CCEEEEE---ChHHHHHHhcCCCceEEEEcCCCCC---Ccch-------------------hhhH-------HHHHHHHH
Confidence 0122333 34433221 5788999998664443 1110 0010 34777778
Q ss_pred HhhccCceEEEEe
Q 017514 206 EELVAEGRMVLTF 218 (370)
Q Consensus 206 ~EL~~GG~lvl~~ 218 (370)
+-|+|||+|++..
T Consensus 210 ~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 210 DALKEDGILSSQG 222 (314)
T ss_dssp HHEEEEEEEEEEC
T ss_pred hhcCCCeEEEEEC
Confidence 8999999999976
|
| >1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A* | Back alignment and structure |
|---|
Probab=95.72 E-value=0.028 Score=53.08 Aligned_cols=113 Identities=13% Similarity=0.017 Sum_probs=58.6
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhC---CCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLG---SASG 125 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~---~~~~ 125 (370)
+.+.+|+|+|||+|..+..++ +. .+..+|..-|+- +...+..++... ..+.
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~--------~~-------~~~~~v~~vDid-----------~~~~~~a~~~~~~~~~~~~ 142 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVL--------KH-------DSVEKAILCEVD-----------GLVIEAARKYLKQTSCGFD 142 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHT--------TS-------TTCSEEEEEESC-----------HHHHHHHHHHCHHHHGGGG
T ss_pred CCCCEEEEEcCCcCHHHHHHH--------hc-------CCCCEEEEEECC-----------HHHHHHHHHHhHhhccccC
Confidence 345799999999999887665 21 134678888874 222111111100 0000
Q ss_pred CCCceEEeecCCCccccc-CCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017514 126 AAGQCFFTGVPGSFYGRL-FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCR 204 (370)
Q Consensus 126 ~~~~~f~~~vpgSFy~~l-~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~R 204 (370)
..+--++.+ +...-+ .+++++|++++...-+|... +..+ ....||+.-
T Consensus 143 ~~~v~~~~~---D~~~~l~~~~~~fD~Ii~d~~~~~~~~-~~~l---------------------------~~~~~l~~~ 191 (296)
T 1inl_A 143 DPRAEIVIA---NGAEYVRKFKNEFDVIIIDSTDPTAGQ-GGHL---------------------------FTEEFYQAC 191 (296)
T ss_dssp CTTEEEEES---CHHHHGGGCSSCEEEEEEEC-----------C---------------------------CSHHHHHHH
T ss_pred CCceEEEEC---cHHHHHhhCCCCceEEEEcCCCcccCc-hhhh---------------------------hHHHHHHHH
Confidence 002233333 432222 14678999998655555421 1110 112367777
Q ss_pred HHhhccCceEEEEe
Q 017514 205 SEELVAEGRMVLTF 218 (370)
Q Consensus 205 a~EL~~GG~lvl~~ 218 (370)
++-|+|||+|++..
T Consensus 192 ~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 192 YDALKEDGVFSAET 205 (296)
T ss_dssp HHHEEEEEEEEEEC
T ss_pred HHhcCCCcEEEEEc
Confidence 78899999999975
|
| >1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A* | Back alignment and structure |
|---|
Probab=95.62 E-value=0.024 Score=53.05 Aligned_cols=21 Identities=19% Similarity=0.237 Sum_probs=17.2
Q ss_pred CCceEEEeecCCCCcchHHHH
Q 017514 49 PTKVAIADLGCSSGPNTLLVA 69 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~ 69 (370)
+.+.+|+|+|||+|..+..++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~ 94 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVL 94 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHT
T ss_pred CCCCeEEEEcCCcCHHHHHHH
Confidence 345799999999999887655
|
| >2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1 | Back alignment and structure |
|---|
Probab=95.60 E-value=0.039 Score=49.01 Aligned_cols=35 Identities=20% Similarity=0.171 Sum_probs=25.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLP 98 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp 98 (370)
+..+|+|+|||+|..++.+. +.. ++..+|+..|+-
T Consensus 69 ~~~~vLdiG~G~G~~~~~la--------~~~------~~~~~v~~vD~~ 103 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALA--------LAL------PADGRVVTCEVD 103 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHH--------TTS------CTTCEEEEEESC
T ss_pred CCCEEEEEcCCccHHHHHHH--------HhC------CCCCEEEEEECC
Confidence 34699999999999988766 211 124678888874
|
| >3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A* | Back alignment and structure |
|---|
Probab=95.59 E-value=0.019 Score=54.13 Aligned_cols=114 Identities=15% Similarity=0.168 Sum_probs=68.9
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHh---hCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQ---LGSASG 125 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~---~~~~~~ 125 (370)
+.+-+|+|+|||.|+.|+.++ ...|..+|...|.- +..-+..... .|.
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~---------------~~~p~a~y~a~DId-----------~~~le~a~~~l~~~g~--- 181 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWM---------------GLPAETVYIASDID-----------ARLVGFVDEALTRLNV--- 181 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTT---------------TCCTTCEEEEEESB-----------HHHHHHHHHHHHHTTC---
T ss_pred CCCceeeeeccCccHHHHHHH---------------hhCCCCEEEEEeCC-----------HHHHHHHHHHHHhcCC---
Confidence 457899999999999999766 12366889999985 3332222211 121
Q ss_pred CCCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCcc-C-----CCceeeecCCC------CHHHHHHHHHHH
Q 017514 126 AAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLE-S-----NKGNIFMASTS------PPCVLTAYYEQF 193 (370)
Q Consensus 126 ~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~-~-----nk~~i~~~~~s------~~~v~~ay~~Q~ 193 (370)
+..|..+ ++-... |+...|++.++=++|-|.+-..+.. . |.+.|.++-.. .+...+-|..+|
T Consensus 182 --~~~~~v~---D~~~~~-p~~~~DvaL~lkti~~Le~q~kg~g~~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~ 255 (281)
T 3lcv_B 182 --PHRTNVA---DLLEDR-LDEPADVTLLLKTLPCLETQQRGSGWEVIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSF 255 (281)
T ss_dssp --CEEEEEC---CTTTSC-CCSCCSEEEETTCHHHHHHHSTTHHHHHHHHSSCSEEEEEEECC-------CHHHHHHHHH
T ss_pred --CceEEEe---eecccC-CCCCcchHHHHHHHHHhhhhhhHHHHHHHHHhCCCCEEEeccchhhcCCCcchhhHHHHHH
Confidence 2233333 443333 7888999999999999976433211 1 56666665422 334556666655
Q ss_pred HHHH
Q 017514 194 QRDF 197 (370)
Q Consensus 194 ~~D~ 197 (370)
+++.
T Consensus 256 e~~~ 259 (281)
T 3lcv_B 256 ESQA 259 (281)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
|
| >2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli} | Back alignment and structure |
|---|
Probab=95.57 E-value=0.07 Score=54.03 Aligned_cols=125 Identities=14% Similarity=0.118 Sum_probs=71.0
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~~ 127 (370)
..+|+|+|||+|..|+.+. +.. + +.-+|+.+|+- +.......+ ..|..
T Consensus 118 g~~VLDl~aGpG~kt~~lA--------~~~---~---~~g~V~avDis-----------~~~l~~~~~n~~r~g~~---- 168 (479)
T 2frx_A 118 PQRVMDVAAAPGSKTTQIS--------ARM---N---NEGAILANEFS-----------ASRVKVLHANISRCGIS---- 168 (479)
T ss_dssp CSEEEESSCTTSHHHHHHH--------HHT---T---TCSEEEEECSS-----------HHHHHHHHHHHHHHTCC----
T ss_pred CCEEEEeCCCCCHHHHHHH--------HhC---C---CCCEEEEEECC-----------HHHHHHHHHHHHHcCCC----
Confidence 4699999999999999776 321 1 23678899985 222221111 12321
Q ss_pred CceEEeecCCCcccccC--CCCceeEEEe---ccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHH
Q 017514 128 GQCFFTGVPGSFYGRLF--PRNSVHLFHS---SYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLK 202 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~--p~~sv~~~~S---~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~ 202 (370)
.-.++.+ +.- .+. +++++|.+++ .+.+.-+.+.|+... ..++..+ ....+.-..+|+
T Consensus 169 nv~~~~~---D~~-~~~~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~---------~~~~~~~-----~~l~~~q~~iL~ 230 (479)
T 2frx_A 169 NVALTHF---DGR-VFGAAVPEMFDAILLDAPCSGEGVVRKDPDALK---------NWSPESN-----QEIAATQRELID 230 (479)
T ss_dssp SEEEECC---CST-THHHHSTTCEEEEEEECCCCCGGGGGTCTTSSS---------SCCHHHH-----HHHHHHHHHHHH
T ss_pred cEEEEeC---CHH-HhhhhccccCCEEEECCCcCCcccccCCHHHHh---------hcCHhHH-----HHHHHHHHHHHH
Confidence 1233333 331 121 4678999997 344555555564321 1122222 122223345787
Q ss_pred HHHHhhccCceEEEEeeccC
Q 017514 203 CRSEELVAEGRMVLTFLGRK 222 (370)
Q Consensus 203 ~Ra~EL~~GG~lvl~~~g~~ 222 (370)
.=++-|+|||+|+.+.+...
T Consensus 231 ~a~~~LkpGG~LvysTcs~~ 250 (479)
T 2frx_A 231 SAFHALRPGGTLVYSTCTLN 250 (479)
T ss_dssp HHHHHEEEEEEEEEEESCCS
T ss_pred HHHHhcCCCCEEEEecccCC
Confidence 77889999999999877543
|
| >2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=95.54 E-value=0.055 Score=54.12 Aligned_cols=126 Identities=12% Similarity=0.052 Sum_probs=67.7
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~~ 127 (370)
..+|+|+|||+|..|+.+. +.. + ...+|+.+|.. +........ ..|..
T Consensus 260 g~~VLDlgaG~G~~t~~la--------~~~---~---~~~~v~a~D~s-----------~~~l~~~~~~~~~~g~~---- 310 (450)
T 2yxl_A 260 GETVVDLAAAPGGKTTHLA--------ELM---K---NKGKIYAFDVD-----------KMRMKRLKDFVKRMGIK---- 310 (450)
T ss_dssp TCEEEESSCTTCHHHHHHH--------HHT---T---TCSEEEEECSC-----------HHHHHHHHHHHHHTTCC----
T ss_pred cCEEEEeCCCccHHHHHHH--------HHc---C---CCCEEEEEcCC-----------HHHHHHHHHHHHHcCCC----
Confidence 3689999999999998766 321 1 13678899985 222222211 11221
Q ss_pred CceEEeecCCCcccc--cCCCCceeEEEe---ccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHH
Q 017514 128 GQCFFTGVPGSFYGR--LFPRNSVHLFHS---SYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLK 202 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~--l~p~~sv~~~~S---~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~ 202 (370)
.-.+.. +++-.- -++++++|.+++ .+.+.-+.+.|+... . .++..+. .....-..+|+
T Consensus 311 ~v~~~~---~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~-------~--~~~~~~~-----~l~~~q~~iL~ 373 (450)
T 2yxl_A 311 IVKPLV---KDARKAPEIIGEEVADKVLLDAPCTSSGTIGKNPELRW-------R--LREDKIN-----EMSQLQRELLE 373 (450)
T ss_dssp SEEEEC---SCTTCCSSSSCSSCEEEEEEECCCCCGGGTTTSTTHHH-------H--CCTTSHH-----HHHHHHHHHHH
T ss_pred cEEEEE---cChhhcchhhccCCCCEEEEcCCCCCCeeeccChhhhh-------h--CCHHHHH-----HHHHHHHHHHH
Confidence 112322 344221 145588999996 233433444443110 0 0111111 11112245777
Q ss_pred HHHHhhccCceEEEEeeccC
Q 017514 203 CRSEELVAEGRMVLTFLGRK 222 (370)
Q Consensus 203 ~Ra~EL~~GG~lvl~~~g~~ 222 (370)
.=++-|+|||+|+...+...
T Consensus 374 ~a~~~LkpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 374 SAARLVKPGGRLLYTTCSIF 393 (450)
T ss_dssp HHHTTEEEEEEEEEEESCCC
T ss_pred HHHHhcCCCcEEEEEeCCCC
Confidence 77888999999998876543
|
| >3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=95.43 E-value=0.082 Score=49.04 Aligned_cols=103 Identities=13% Similarity=-0.015 Sum_probs=61.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~ 126 (370)
+.-+|+|+|||+|..|+.+. +++ +..+|+..|+- +......++ ..+..
T Consensus 119 ~~~~VLDlgcG~G~~s~~la--------~~~-------~~~~V~~vD~s-----------~~av~~a~~n~~~n~l~--- 169 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLA--------KYS-------KPKLVYAIEKN-----------PTAYHYLCENIKLNKLN--- 169 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHH--------HHT-------CCSEEEEEECC-----------HHHHHHHHHHHHHTTCS---
T ss_pred CCCEEEEecCcCCHHHHHHH--------HhC-------CCCEEEEEeCC-----------HHHHHHHHHHHHHcCCC---
Confidence 34699999999999999776 331 23578888874 332222211 11211
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
+-.|+.| +..+ +...+++|++++.. |.. ...+|..-.+
T Consensus 170 -~~~~~~~---d~~~-~~~~~~~D~Vi~d~--------p~~-----------------------------~~~~l~~~~~ 207 (272)
T 3a27_A 170 -NVIPILA---DNRD-VELKDVADRVIMGY--------VHK-----------------------------THKFLDKTFE 207 (272)
T ss_dssp -SEEEEES---CGGG-CCCTTCEEEEEECC--------CSS-----------------------------GGGGHHHHHH
T ss_pred -CEEEEEC---ChHH-cCccCCceEEEECC--------ccc-----------------------------HHHHHHHHHH
Confidence 2245554 5533 21156899987652 211 1114555567
Q ss_pred hhccCceEEEEeeccCC
Q 017514 207 ELVAEGRMVLTFLGRKS 223 (370)
Q Consensus 207 EL~~GG~lvl~~~g~~~ 223 (370)
-|+|||++++......+
T Consensus 208 ~LkpgG~l~~s~~~~~~ 224 (272)
T 3a27_A 208 FLKDRGVIHYHETVAEK 224 (272)
T ss_dssp HEEEEEEEEEEEEEEGG
T ss_pred HcCCCCEEEEEEcCccc
Confidence 89999999998886644
|
| >1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17 | Back alignment and structure |
|---|
Probab=95.29 E-value=0.049 Score=50.85 Aligned_cols=112 Identities=13% Similarity=0.027 Sum_probs=62.1
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhh---CCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL---GSASG 125 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~---~~~~~ 125 (370)
+++.+|+|+|||+|..+..++ ++ .+.-+|..-|+- +...+..++.. ...+.
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~--------~~-------~~~~~v~~vEid-----------~~~v~~ar~~~~~~~~~~~ 127 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREIL--------KH-------PSVKKATLVDID-----------GKVIEYSKKFLPSIAGKLD 127 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHT--------TC-------TTCSEEEEEESC-----------HHHHHHHHHHCHHHHTTTT
T ss_pred CCCCEEEEECCchHHHHHHHH--------hC-------CCCceEEEEECC-----------HHHHHHHHHHhHhhccccC
Confidence 456899999999998877555 21 133577777774 22221111111 00000
Q ss_pred CCCceEEeecCCCcccccC-CCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017514 126 AAGQCFFTGVPGSFYGRLF-PRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCR 204 (370)
Q Consensus 126 ~~~~~f~~~vpgSFy~~l~-p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~R 204 (370)
..+--++.+ +...-|- ++++.|++++....+|. .|..+. + ..|++.-
T Consensus 128 ~~rv~v~~~---D~~~~l~~~~~~fD~Ii~d~~~~~~--~~~~l~-----------~----------------~~~~~~~ 175 (275)
T 1iy9_A 128 DPRVDVQVD---DGFMHIAKSENQYDVIMVDSTEPVG--PAVNLF-----------T----------------KGFYAGI 175 (275)
T ss_dssp STTEEEEES---CSHHHHHTCCSCEEEEEESCSSCCS--CCCCCS-----------T----------------THHHHHH
T ss_pred CCceEEEEC---cHHHHHhhCCCCeeEEEECCCCCCC--cchhhh-----------H----------------HHHHHHH
Confidence 002234333 4432221 46789999997666652 122111 0 1256666
Q ss_pred HHhhccCceEEEEe
Q 017514 205 SEELVAEGRMVLTF 218 (370)
Q Consensus 205 a~EL~~GG~lvl~~ 218 (370)
.+-|+|||+|++..
T Consensus 176 ~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 176 AKALKEDGIFVAQT 189 (275)
T ss_dssp HHHEEEEEEEEEEC
T ss_pred HHhcCCCcEEEEEc
Confidence 78899999999985
|
| >3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A* | Back alignment and structure |
|---|
Probab=95.25 E-value=0.051 Score=54.92 Aligned_cols=124 Identities=13% Similarity=0.029 Sum_probs=69.1
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~~ 127 (370)
..+|+|+|||+|..|+.+. +.. + +.-+|+.+|+- +.......+ ..|.
T Consensus 102 g~~VLDlgaGpG~kt~~LA--------~~~---~---~~g~V~AvDis-----------~~~l~~a~~n~~r~G~----- 151 (464)
T 3m6w_A 102 GERVLDLAAAPGGKTTHLA--------ARM---G---GKGLLLANEVD-----------GKRVRGLLENVERWGA----- 151 (464)
T ss_dssp TCEEEESSCTTCHHHHHHH--------HHT---T---TCSEEEEECSC-----------HHHHHHHHHHHHHHCC-----
T ss_pred CCEEEEEcCCcCHHHHHHH--------HhC---C---CCCEEEEEECC-----------HHHHHHHHHHHHHcCC-----
Confidence 4799999999999998776 331 1 23678899985 222222211 1121
Q ss_pred CceEEeecCCCccccc-CCCCceeEEEe---ccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017514 128 GQCFFTGVPGSFYGRL-FPRNSVHLFHS---SYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKC 203 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l-~p~~sv~~~~S---~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~ 203 (370)
.-.++ -++...-. ++++++|.+++ .+.+--+.+.|+... ..++..+. ...+.-..+|+.
T Consensus 152 ~v~~~---~~Da~~l~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~---------~~~~~~~~-----~l~~~Q~~iL~~ 214 (464)
T 3m6w_A 152 PLAVT---QAPPRALAEAFGTYFHRVLLDAPCSGEGMFRKDREAAR---------HWGPSAPK-----RMAEVQKALLAQ 214 (464)
T ss_dssp CCEEE---CSCHHHHHHHHCSCEEEEEEECCCCCGGGTTTCTTSGG---------GCCTTHHH-----HHHHHHHHHHHH
T ss_pred eEEEE---ECCHHHhhhhccccCCEEEECCCcCCccccccChHHhh---------hcCHHHHH-----HHHHHHHHHHHH
Confidence 11232 23442211 24678999985 233333344454321 11222221 222333568888
Q ss_pred HHHhhccCceEEEEeecc
Q 017514 204 RSEELVAEGRMVLTFLGR 221 (370)
Q Consensus 204 Ra~EL~~GG~lvl~~~g~ 221 (370)
=++-|+|||+|+.+.+..
T Consensus 215 a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 215 ASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp HHTTEEEEEEEEEEESCC
T ss_pred HHHhcCCCcEEEEEeccC
Confidence 888999999999887654
|
| >3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP} | Back alignment and structure |
|---|
Probab=95.23 E-value=0.064 Score=48.31 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=24.7
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLP 98 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp 98 (370)
..+|+|+|||+|..++.+. +.+ ++..+|+.-|.-
T Consensus 73 ~~~vLdiG~G~G~~~~~la--------~~~------~~~~~v~~iD~~ 106 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMA--------LQL------PPDGQIIACDQD 106 (232)
T ss_dssp CCEEEEECCTTSHHHHHHH--------TTS------CTTCEEEEEESC
T ss_pred CCEEEEecCCCCHHHHHHH--------HhC------CCCCEEEEEECC
Confidence 4699999999999988776 221 124678888864
|
| >1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A* | Back alignment and structure |
|---|
Probab=95.19 E-value=0.076 Score=49.77 Aligned_cols=31 Identities=35% Similarity=0.526 Sum_probs=24.4
Q ss_pred eEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCC
Q 017514 52 VAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLP 98 (370)
Q Consensus 52 ~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp 98 (370)
.+|+|+|||+|..++.+. +. |..+|+..|+-
T Consensus 125 ~~vLDlG~GsG~~~~~la--------~~--------~~~~v~~vDis 155 (284)
T 1nv8_A 125 KTVADIGTGSGAIGVSVA--------KF--------SDAIVFATDVS 155 (284)
T ss_dssp CEEEEESCTTSHHHHHHH--------HH--------SSCEEEEEESC
T ss_pred CEEEEEeCchhHHHHHHH--------HC--------CCCEEEEEECC
Confidence 589999999999988665 21 34788888874
|
| >2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51 | Back alignment and structure |
|---|
Probab=95.09 E-value=0.079 Score=50.96 Aligned_cols=115 Identities=14% Similarity=0.100 Sum_probs=64.4
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~~ 127 (370)
..+|+|+|||+|..++.+. +. | .+|+..|+- +.......+ ..+... .
T Consensus 154 ~~~VLDlgcGtG~~sl~la--------~~----g-----a~V~~VD~s-----------~~al~~a~~n~~~~gl~~--~ 203 (332)
T 2igt_A 154 PLKVLNLFGYTGVASLVAA--------AA----G-----AEVTHVDAS-----------KKAIGWAKENQVLAGLEQ--A 203 (332)
T ss_dssp CCEEEEETCTTCHHHHHHH--------HT----T-----CEEEEECSC-----------HHHHHHHHHHHHHHTCTT--S
T ss_pred CCcEEEcccccCHHHHHHH--------Hc----C-----CEEEEEECC-----------HHHHHHHHHHHHHcCCCc--c
Confidence 4699999999999998776 21 1 378888875 222222211 112110 0
Q ss_pred CceEEeecCCCcccccC----CCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017514 128 GQCFFTGVPGSFYGRLF----PRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKC 203 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~----p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~ 203 (370)
+-.|+.+ +..+-+. ..+++|++++.- |..-...++.++ ...+|+..+|+.
T Consensus 204 ~v~~i~~---D~~~~l~~~~~~~~~fD~Ii~dP--------P~~~~~~~~~~~---------------~~~~~~~~ll~~ 257 (332)
T 2igt_A 204 PIRWICE---DAMKFIQREERRGSTYDIILTDP--------PKFGRGTHGEVW---------------QLFDHLPLMLDI 257 (332)
T ss_dssp CEEEECS---CHHHHHHHHHHHTCCBSEEEECC--------CSEEECTTCCEE---------------EHHHHHHHHHHH
T ss_pred ceEEEEC---cHHHHHHHHHhcCCCceEEEECC--------ccccCCchHHHH---------------HHHHHHHHHHHH
Confidence 0234333 5533221 156899998741 211100011111 123566778888
Q ss_pred HHHhhccCceEEEEeecc
Q 017514 204 RSEELVAEGRMVLTFLGR 221 (370)
Q Consensus 204 Ra~EL~~GG~lvl~~~g~ 221 (370)
-.+-|+|||.++++....
T Consensus 258 ~~~~LkpgG~lli~~~~~ 275 (332)
T 2igt_A 258 CREILSPKALGLVLTAYS 275 (332)
T ss_dssp HHHTBCTTCCEEEEEECC
T ss_pred HHHhcCcCcEEEEEECCC
Confidence 889999999988877654
|
| >1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A* | Back alignment and structure |
|---|
Probab=95.03 E-value=0.15 Score=49.57 Aligned_cols=114 Identities=14% Similarity=0.016 Sum_probs=65.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhh-CCCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAAG 128 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~-~~~~~~~~ 128 (370)
+.-+|+|+|||+|..|+.+.. . .-+|+..|+- +...+...... ..+. ..
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~--------~---------~~~v~~vD~s-----------~~~~~~a~~n~~~n~~--~~ 258 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLAL--------G---------FREVVAVDSS-----------AEALRRAEENARLNGL--GN 258 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHH--------H---------EEEEEEEESC-----------HHHHHHHHHHHHHTTC--TT
T ss_pred CCCeEEEeeeccCHHHHHHHH--------h---------CCEEEEEECC-----------HHHHHHHHHHHHHcCC--CC
Confidence 357999999999999987762 1 1467777764 22222111111 0111 01
Q ss_pred ceEEeecCCCcccccC----CCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017514 129 QCFFTGVPGSFYGRLF----PRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCR 204 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~----p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~R 204 (370)
-.|+.+ +..+-+. +++++|++++ . |+....++ ..+ ....+++..+|..-
T Consensus 259 ~~~~~~---d~~~~~~~~~~~~~~fD~Ii~--------d-pP~~~~~~----------~~~-----~~~~~~~~~~l~~~ 311 (382)
T 1wxx_A 259 VRVLEA---NAFDLLRRLEKEGERFDLVVL--------D-PPAFAKGK----------KDV-----ERAYRAYKEVNLRA 311 (382)
T ss_dssp EEEEES---CHHHHHHHHHHTTCCEEEEEE--------C-CCCSCCST----------TSH-----HHHHHHHHHHHHHH
T ss_pred ceEEEC---CHHHHHHHHHhcCCCeeEEEE--------C-CCCCCCCh----------hHH-----HHHHHHHHHHHHHH
Confidence 234333 5533222 1578999985 2 33221111 111 23456777899999
Q ss_pred HHhhccCceEEEEeec
Q 017514 205 SEELVAEGRMVLTFLG 220 (370)
Q Consensus 205 a~EL~~GG~lvl~~~g 220 (370)
.+-|+|||.|++....
T Consensus 312 ~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 312 IKLLKEGGILATASCS 327 (382)
T ss_dssp HHTEEEEEEEEEEECC
T ss_pred HHhcCCCCEEEEEECC
Confidence 9999999999988754
|
| >3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca} | Back alignment and structure |
|---|
Probab=94.87 E-value=0.015 Score=51.18 Aligned_cols=34 Identities=15% Similarity=0.026 Sum_probs=24.8
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLP 98 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp 98 (370)
..+|+|+|||+|..|+.+. +.. ++..+|+.-|.-
T Consensus 57 ~~~vLdiG~G~G~~~~~la--------~~~------~~~~~v~~vD~~ 90 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFA--------RAI------SISSRVVMIDPD 90 (210)
T ss_dssp CSEEEEESCGGGHHHHHHH--------TTS------CTTCEEEEEESC
T ss_pred CCEEEEEcCCccHHHHHHH--------HhC------CCCCEEEEEECC
Confidence 4699999999999988766 221 124678888874
|
| >1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32 | Back alignment and structure |
|---|
Probab=94.85 E-value=0.11 Score=45.03 Aligned_cols=75 Identities=11% Similarity=0.079 Sum_probs=43.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
...+|+|+|||+|..++.+. +. +.-+|+.-|+- +.......+... +-
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~--------~~--------~~~~v~~vD~~-----------~~~~~~a~~~~~------~~ 97 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSY--------LL--------GAESVTAFDID-----------PDAIETAKRNCG------GV 97 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHH--------HT--------TBSEEEEEESC-----------HHHHHHHHHHCT------TS
T ss_pred CCCEEEEEeCCccHHHHHHH--------Hc--------CCCEEEEEECC-----------HHHHHHHHHhcC------CC
Confidence 34699999999999887655 21 22468888874 333222222111 12
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccC
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQ 163 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~ 163 (370)
.|+.+ ++.. +| +++|+++++-.+||++.
T Consensus 98 ~~~~~---d~~~--~~-~~~D~v~~~~p~~~~~~ 125 (200)
T 1ne2_A 98 NFMVA---DVSE--IS-GKYDTWIMNPPFGSVVK 125 (200)
T ss_dssp EEEEC---CGGG--CC-CCEEEEEECCCC-----
T ss_pred EEEEC---cHHH--CC-CCeeEEEECCCchhccC
Confidence 34443 5533 34 79999999999999754
|
| >1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A* | Back alignment and structure |
|---|
Probab=94.76 E-value=0.023 Score=52.14 Aligned_cols=35 Identities=14% Similarity=0.167 Sum_probs=25.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLP 98 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp 98 (370)
+.-+|+|+|||+|..++.+. +.. ++..+|+.-|.-
T Consensus 79 ~~~~VLeiG~G~G~~~~~la--------~~~------~~~~~v~~iD~s 113 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATA--------LAI------PEDGKILAMDIN 113 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHH--------HHS------CTTCEEEEEESC
T ss_pred CcCEEEEeCCCcCHHHHHHH--------HhC------CCCCEEEEEECC
Confidence 35699999999999998776 321 124678888874
|
| >3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum} | Back alignment and structure |
|---|
Probab=94.70 E-value=0.025 Score=51.35 Aligned_cols=35 Identities=17% Similarity=0.133 Sum_probs=25.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLP 98 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp 98 (370)
++-+|+|+|||+|..|+.+. +.. ++..+|+..|.-
T Consensus 70 ~~~~VLeiG~G~G~~~~~la--------~~~------~~~~~v~~iD~~ 104 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTA--------LSI------PDDGKITAIDFD 104 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHH--------HHS------CTTCEEEEEESC
T ss_pred CCCEEEEeCCCCCHHHHHHH--------HhC------CCCCEEEEEECC
Confidence 45699999999999998776 321 124678888874
|
| >2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45 | Back alignment and structure |
|---|
Probab=94.55 E-value=0.19 Score=48.09 Aligned_cols=125 Identities=11% Similarity=0.079 Sum_probs=66.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~ 126 (370)
...+|+|.|||+|..++.+...+ ++ .. ....+++..|+- +........ ..+.
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~----~~----~~--~~~~~v~GiDi~-----------~~~~~~a~~n~~~~g~---- 184 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQL----EL----KG--DVDVHASGVDVD-----------DLLISLALVGADLQRQ---- 184 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHH----HT----TS--SCEEEEEEEESC-----------HHHHHHHHHHHHHHTC----
T ss_pred CCCEEEeCCCCccHHHHHHHHHH----HH----hc--CCCceEEEEECC-----------HHHHHHHHHHHHhCCC----
Confidence 46899999999998877665321 11 00 123778888874 211111100 1121
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHH-HHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDF-SLFLKCRS 205 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~-~~fL~~Ra 205 (370)
...+.. |++... .+..++|+++++--+++... ++.... |-.. .+... .|. ..|+..-.
T Consensus 185 -~~~i~~---~D~l~~-~~~~~fD~Ii~NPPfg~~~~-~~~~~~-----~~~~-~~~g~---------~~~~~~~l~~~~ 243 (344)
T 2f8l_A 185 -KMTLLH---QDGLAN-LLVDPVDVVISDLPVGYYPD-DENAKT-----FELC-REEGH---------SFAHFLFIEQGM 243 (344)
T ss_dssp -CCEEEE---SCTTSC-CCCCCEEEEEEECCCSEESC-HHHHTT-----STTC-CSSSC---------EEHHHHHHHHHH
T ss_pred -CceEEE---CCCCCc-cccCCccEEEECCCCCCcCc-hhhhhh-----cccc-CCCCc---------chHHHHHHHHHH
Confidence 122333 354443 35678999999977766432 100000 0000 00000 112 23777778
Q ss_pred HhhccCceEEEEeec
Q 017514 206 EELVAEGRMVLTFLG 220 (370)
Q Consensus 206 ~EL~~GG~lvl~~~g 220 (370)
+-|+|||+++++++.
T Consensus 244 ~~Lk~gG~~~~v~p~ 258 (344)
T 2f8l_A 244 RYTKPGGYLFFLVPD 258 (344)
T ss_dssp HTEEEEEEEEEEEEG
T ss_pred HHhCCCCEEEEEECc
Confidence 889999999999864
|
| >2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A* | Back alignment and structure |
|---|
Probab=94.52 E-value=0.22 Score=48.48 Aligned_cols=24 Identities=21% Similarity=0.315 Sum_probs=20.6
Q ss_pred HHHHHHHHHHhhccCceEEEEeec
Q 017514 197 FSLFLKCRSEELVAEGRMVLTFLG 220 (370)
Q Consensus 197 ~~~fL~~Ra~EL~~GG~lvl~~~g 220 (370)
+..||+.=.+-|+|||+++++++.
T Consensus 143 ~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 143 YGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred HHHHHHHHHHHhCCCCEEEEEECh
Confidence 457888888999999999999874
|
| >2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51 | Back alignment and structure |
|---|
Probab=94.41 E-value=0.15 Score=49.90 Aligned_cols=113 Identities=12% Similarity=0.023 Sum_probs=66.2
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~~ 127 (370)
.-+|+|+|||+|..|+.+. +. ..-+|+..|+- +........ ..+...
T Consensus 218 ~~~VLDl~~G~G~~~~~la--------~~--------g~~~v~~vD~s-----------~~~l~~a~~n~~~n~~~~--- 267 (396)
T 2as0_A 218 GDRVLDVFTYTGGFAIHAA--------IA--------GADEVIGIDKS-----------PRAIETAKENAKLNGVED--- 267 (396)
T ss_dssp TCEEEETTCTTTHHHHHHH--------HT--------TCSEEEEEESC-----------HHHHHHHHHHHHHTTCGG---
T ss_pred CCeEEEecCCCCHHHHHHH--------HC--------CCCEEEEEeCC-----------HHHHHHHHHHHHHcCCCc---
Confidence 4699999999999998776 21 12478888874 222221111 112100
Q ss_pred CceEEeecCCCcccccC----CCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017514 128 GQCFFTGVPGSFYGRLF----PRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKC 203 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~----p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~ 203 (370)
+-.|+.+ +..+-+. +.+++|++++. |+....+ +..+ .+..+++..+|..
T Consensus 268 ~v~~~~~---d~~~~~~~~~~~~~~fD~Vi~d---------pP~~~~~----------~~~~-----~~~~~~~~~~l~~ 320 (396)
T 2as0_A 268 RMKFIVG---SAFEEMEKLQKKGEKFDIVVLD---------PPAFVQH----------EKDL-----KAGLRAYFNVNFA 320 (396)
T ss_dssp GEEEEES---CHHHHHHHHHHTTCCEEEEEEC---------CCCSCSS----------GGGH-----HHHHHHHHHHHHH
T ss_pred cceEEEC---CHHHHHHHHHhhCCCCCEEEEC---------CCCCCCC----------HHHH-----HHHHHHHHHHHHH
Confidence 1234433 5533221 25789999862 3322111 1112 2345778889999
Q ss_pred HHHhhccCceEEEEeec
Q 017514 204 RSEELVAEGRMVLTFLG 220 (370)
Q Consensus 204 Ra~EL~~GG~lvl~~~g 220 (370)
-.+-|+|||.|++....
T Consensus 321 ~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 321 GLNLVKDGGILVTCSCS 337 (396)
T ss_dssp HHTTEEEEEEEEEEECC
T ss_pred HHHhcCCCcEEEEEECC
Confidence 99999999999888764
|
| >4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A* | Back alignment and structure |
|---|
Probab=94.40 E-value=0.13 Score=53.94 Aligned_cols=109 Identities=17% Similarity=0.177 Sum_probs=61.0
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (370)
.+..+|+|+|||+|+.+...+.. .++. + -.+.||.-+- |.=-.+.+.+ .-.+.++.
T Consensus 356 ~~~~vVldVGaGrGpLv~~al~A----~a~~----~---~~vkVyAVEk--np~A~~a~~~-----v~~N~~~d------ 411 (637)
T 4gqb_A 356 TNVQVLMVLGAGRGPLVNASLRA----AKQA----D---RRIKLYAVEK--NPNAVVTLEN-----WQFEEWGS------ 411 (637)
T ss_dssp TCEEEEEEESCTTSHHHHHHHHH----HHHT----T---CEEEEEEEES--CHHHHHHHHH-----HHHHTTGG------
T ss_pred CCCcEEEEECCCCcHHHHHHHHH----HHhc----C---CCcEEEEEEC--CHHHHHHHHH-----HHhccCCC------
Confidence 45789999999999987766633 2221 1 1377777664 2211111111 11122222
Q ss_pred ceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
.+ .-|-|.- +.+-++..+|+++| -||-..- .| ... ++ .|.+|-+=|
T Consensus 412 kV--tVI~gd~-eev~LPEKVDIIVS----EwMG~fL----l~-------E~m-le---------------vL~Ardr~L 457 (637)
T 4gqb_A 412 QV--TVVSSDM-REWVAPEKADIIVS----ELLGSFA----DN-------ELS-PE---------------CLDGAQHFL 457 (637)
T ss_dssp GE--EEEESCT-TTCCCSSCEEEEEC----CCCBTTB----GG-------GCH-HH---------------HHHHHGGGE
T ss_pred eE--EEEeCcc-eeccCCcccCEEEE----EcCcccc----cc-------cCC-HH---------------HHHHHHHhc
Confidence 22 2233455 66677789999998 4544321 11 111 12 477888999
Q ss_pred ccCceEE
Q 017514 209 VAEGRMV 215 (370)
Q Consensus 209 ~~GG~lv 215 (370)
+|||+|+
T Consensus 458 KPgGimi 464 (637)
T 4gqb_A 458 KDDGVSI 464 (637)
T ss_dssp EEEEEEE
T ss_pred CCCcEEc
Confidence 9999974
|
| >3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae} | Back alignment and structure |
|---|
Probab=94.26 E-value=0.15 Score=46.80 Aligned_cols=102 Identities=11% Similarity=0.052 Sum_probs=60.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHh---hCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQ---LGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~---~~~~~~~ 126 (370)
+.-+|+|+||+||..++.+. +. + |.-+|+..|+- +.....-... .+-.
T Consensus 21 ~g~~VlDIGtGsG~l~i~la--------~~----~---~~~~V~AvDi~-----------~~al~~A~~N~~~~gl~--- 71 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLL--------QM----G---YCDFAIAGEVV-----------NGPYQSALKNVSEHGLT--- 71 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHH--------HT----T---CEEEEEEEESS-----------HHHHHHHHHHHHHTTCT---
T ss_pred CCCEEEEECCchHHHHHHHH--------Hh----C---CCCEEEEEECC-----------HHHHHHHHHHHHHcCCC---
Confidence 34899999999999988776 32 1 44678999985 3332222211 1211
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
.+-.+. -|+-++-+.|.+.+|+++.. +.. - .-+..+|....+
T Consensus 72 ~~I~~~---~gD~l~~~~~~~~~D~Ivia-----------GmG------------g------------~lI~~IL~~~~~ 113 (230)
T 3lec_A 72 SKIDVR---LANGLSAFEEADNIDTITIC-----------GMG------------G------------RLIADILNNDID 113 (230)
T ss_dssp TTEEEE---ECSGGGGCCGGGCCCEEEEE-----------EEC------------H------------HHHHHHHHHTGG
T ss_pred CcEEEE---ECchhhccccccccCEEEEe-----------CCc------------h------------HHHHHHHHHHHH
Confidence 012332 33666666555568877642 110 0 123447777777
Q ss_pred hhccCceEEEEe
Q 017514 207 ELVAEGRMVLTF 218 (370)
Q Consensus 207 EL~~GG~lvl~~ 218 (370)
-|+++|+|+++-
T Consensus 114 ~l~~~~~lIlqp 125 (230)
T 3lec_A 114 KLQHVKTLVLQP 125 (230)
T ss_dssp GGTTCCEEEEEE
T ss_pred HhCcCCEEEEEC
Confidence 799999988875
|
| >3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str} | Back alignment and structure |
|---|
Probab=94.16 E-value=0.15 Score=47.08 Aligned_cols=102 Identities=13% Similarity=0.095 Sum_probs=60.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHh---hCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQ---LGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~---~~~~~~~ 126 (370)
+.-+|+|+|||+|..++.+. +. + |.-+|+..|+- +.....-.+. .+-.
T Consensus 21 ~g~~VlDIGtGsG~l~i~la--------~~----~---~~~~V~avDi~-----------~~al~~A~~N~~~~gl~--- 71 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAV--------KN----Q---TASFAIAGEVV-----------DGPFQSAQKQVRSSGLT--- 71 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHH--------HT----T---SEEEEEEEESS-----------HHHHHHHHHHHHHTTCT---
T ss_pred CCCEEEEECCccHHHHHHHH--------Hh----C---CCCEEEEEECC-----------HHHHHHHHHHHHHcCCC---
Confidence 34799999999999988776 32 1 44678999985 3322222211 1211
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
.+-.+ .-|+-++.+.|.+++|++++. +.. - .-+..+|..-.+
T Consensus 72 ~~I~v---~~gD~l~~~~~~~~~D~Ivia-----------gmG------------g------------~lI~~IL~~~~~ 113 (244)
T 3gnl_A 72 EQIDV---RKGNGLAVIEKKDAIDTIVIA-----------GMG------------G------------TLIRTILEEGAA 113 (244)
T ss_dssp TTEEE---EECSGGGGCCGGGCCCEEEEE-----------EEC------------H------------HHHHHHHHHTGG
T ss_pred ceEEE---EecchhhccCccccccEEEEe-----------CCc------------h------------HHHHHHHHHHHH
Confidence 01123 334666666555568887752 110 0 123447777777
Q ss_pred hhccCceEEEEe
Q 017514 207 ELVAEGRMVLTF 218 (370)
Q Consensus 207 EL~~GG~lvl~~ 218 (370)
-|+++|+||++-
T Consensus 114 ~L~~~~~lIlq~ 125 (244)
T 3gnl_A 114 KLAGVTKLILQP 125 (244)
T ss_dssp GGTTCCEEEEEE
T ss_pred HhCCCCEEEEEc
Confidence 888999988874
|
| >3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A* | Back alignment and structure |
|---|
Probab=94.15 E-value=0.16 Score=46.25 Aligned_cols=34 Identities=6% Similarity=0.013 Sum_probs=26.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLP 98 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp 98 (370)
..-+|+|+|||+|..++.+. +. .|.-+|+..|.-
T Consensus 15 ~g~~VlDIGtGsG~l~i~la--------~~-------~~~~~V~avDi~ 48 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELV--------ER-------GQIKSAIAGEVV 48 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHH--------HT-------TSEEEEEEEESS
T ss_pred CCCEEEEeCCCcHHHHHHHH--------Hh-------CCCCEEEEEECC
Confidence 34799999999999988776 32 145688999985
|
| >4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=94.05 E-value=0.4 Score=47.15 Aligned_cols=110 Identities=18% Similarity=0.136 Sum_probs=64.0
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~~ 127 (370)
.-+|+|+||++|..|+.+. +. | ..|+..|+- +...+...+ ..+.
T Consensus 215 g~~VLDlg~GtG~~sl~~a--------~~----g-----a~V~avDis-----------~~al~~a~~n~~~ng~----- 261 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAA--------RK----G-----AYALAVDKD-----------LEALGVLDQAALRLGL----- 261 (393)
T ss_dssp TCEEEEESCTTTHHHHHHH--------HT----T-----CEEEEEESC-----------HHHHHHHHHHHHHHTC-----
T ss_pred CCeEEEcccchhHHHHHHH--------Hc----C-----CeEEEEECC-----------HHHHHHHHHHHHHhCC-----
Confidence 4689999999999998776 21 2 238888885 332222211 1122
Q ss_pred CceEEeecCCCcccccC-CCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 128 GQCFFTGVPGSFYGRLF-PRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~-p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
..-+.. ++..+-+- .++.+|++++. |+....+ +.. .....+|+..++..-.+
T Consensus 262 ~~~~~~---~D~~~~l~~~~~~fD~Ii~d---------pP~f~~~----------~~~-----~~~~~~~~~~ll~~a~~ 314 (393)
T 4dmg_A 262 RVDIRH---GEALPTLRGLEGPFHHVLLD---------PPTLVKR----------PEE-----LPAMKRHLVDLVREALR 314 (393)
T ss_dssp CCEEEE---SCHHHHHHTCCCCEEEEEEC---------CCCCCSS----------GGG-----HHHHHHHHHHHHHHHHH
T ss_pred CCcEEE---ccHHHHHHHhcCCCCEEEEC---------CCcCCCC----------HHH-----HHHHHHHHHHHHHHHHH
Confidence 122332 24433221 13349999863 3322211 111 23455677889999999
Q ss_pred hhccCceEEEEeec
Q 017514 207 ELVAEGRMVLTFLG 220 (370)
Q Consensus 207 EL~~GG~lvl~~~g 220 (370)
-|+|||+|++....
T Consensus 315 ~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 315 LLAEEGFLWLSSCS 328 (393)
T ss_dssp TEEEEEEEEEEECC
T ss_pred hcCCCCEEEEEECC
Confidence 99999999966654
|
| >2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A* | Back alignment and structure |
|---|
Probab=93.39 E-value=0.42 Score=46.62 Aligned_cols=26 Identities=15% Similarity=0.291 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHhhccCceEEEEeec
Q 017514 195 RDFSLFLKCRSEELVAEGRMVLTFLG 220 (370)
Q Consensus 195 ~D~~~fL~~Ra~EL~~GG~lvl~~~g 220 (370)
+++..+++.-.+-|+|||.+++....
T Consensus 308 ~~~~~ll~~~~~~L~pgG~l~~~~~~ 333 (385)
T 2b78_A 308 KDYHKLIRQGLEILSENGLIIASTNA 333 (385)
T ss_dssp HHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 55666888888999999999988753
|
| >3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium} | Back alignment and structure |
|---|
Probab=93.02 E-value=0.13 Score=51.84 Aligned_cols=124 Identities=14% Similarity=0.080 Sum_probs=66.3
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~~ 127 (370)
..+|+|+|||+|..|+.+. +.. + ..-+|+.+|+- +.......+ ..|..
T Consensus 106 g~~VLDlcaGpGgkt~~lA--------~~~---~---~~g~V~AvDis-----------~~rl~~~~~n~~r~g~~---- 156 (456)
T 3m4x_A 106 GEKVLDLCAAPGGKSTQLA--------AQM---K---GKGLLVTNEIF-----------PKRAKILSENIERWGVS---- 156 (456)
T ss_dssp TCEEEESSCTTCHHHHHHH--------HHH---T---TCSEEEEECSS-----------HHHHHHHHHHHHHHTCS----
T ss_pred CCEEEEECCCcCHHHHHHH--------HHc---C---CCCEEEEEeCC-----------HHHHHHHHHHHHHcCCC----
Confidence 4799999999999998776 322 1 23678899985 222111111 12321
Q ss_pred CceEEeecCCCccccc--CCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHH----HHHHHHHHHHHHH
Q 017514 128 GQCFFTGVPGSFYGRL--FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTA----YYEQFQRDFSLFL 201 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l--~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~a----y~~Q~~~D~~~fL 201 (370)
.-.++.+ +. ..+ .+++++|.|++ ..|+.-.. .+ . ..+.+... ........-..+|
T Consensus 157 nv~v~~~---Da-~~l~~~~~~~FD~Il~--------DaPCSg~G---~~--r--r~p~~~~~~~~~~~~~l~~~Q~~iL 217 (456)
T 3m4x_A 157 NAIVTNH---AP-AELVPHFSGFFDRIVV--------DAPCSGEG---MF--R--KDPNAIKEWTEESPLYCQKRQQEIL 217 (456)
T ss_dssp SEEEECC---CH-HHHHHHHTTCEEEEEE--------ECCCCCGG---GT--T--TCHHHHHHCCTTHHHHHHHHHHHHH
T ss_pred ceEEEeC---CH-HHhhhhccccCCEEEE--------CCCCCCcc---cc--c--cCHHHhhhcCHHHHHHHHHHHHHHH
Confidence 1123333 33 122 13578999976 33432111 00 0 01111100 1122233345688
Q ss_pred HHHHHhhccCceEEEEeeccC
Q 017514 202 KCRSEELVAEGRMVLTFLGRK 222 (370)
Q Consensus 202 ~~Ra~EL~~GG~lvl~~~g~~ 222 (370)
..=.+-|+|||+|+.+.+...
T Consensus 218 ~~a~~~LkpGG~LvYsTCs~~ 238 (456)
T 3m4x_A 218 SSAIKMLKNKGQLIYSTCTFA 238 (456)
T ss_dssp HHHHHTEEEEEEEEEEESCCC
T ss_pred HHHHHhcCCCcEEEEEEeecc
Confidence 888889999999998877543
|
| >2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A | Back alignment and structure |
|---|
Probab=92.82 E-value=0.19 Score=46.52 Aligned_cols=19 Identities=11% Similarity=0.078 Sum_probs=16.3
Q ss_pred HHHHHHHhhccCceEEEEe
Q 017514 200 FLKCRSEELVAEGRMVLTF 218 (370)
Q Consensus 200 fL~~Ra~EL~~GG~lvl~~ 218 (370)
|++.-.+-|+|||+|++..
T Consensus 153 ~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 153 RIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp HHHHHHTTEEEEEEEEEEE
T ss_pred HHHHHHHhcCCCcEEEEEc
Confidence 7777788999999999864
|
| >2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638} | Back alignment and structure |
|---|
Probab=92.53 E-value=0.56 Score=45.38 Aligned_cols=102 Identities=12% Similarity=0.079 Sum_probs=60.6
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~~ 127 (370)
..+|+|+| |+|..++.+. +. + |..+|+.-|+. +......++ ..+.
T Consensus 173 ~~~VLDlG-G~G~~~~~la--------~~----~---~~~~v~~vDi~-----------~~~l~~a~~~~~~~g~----- 220 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALM--------LS----G---LPKRIAVLDID-----------ERLTKFIEKAANEIGY----- 220 (373)
T ss_dssp TCEEEEES-CTTCHHHHHH--------HH----T---CCSEEEEECSC-----------HHHHHHHHHHHHHHTC-----
T ss_pred CCEEEEEC-CCCHHHHHHH--------Hh----C---CCCEEEEEECC-----------HHHHHHHHHHHHHcCC-----
Confidence 47999999 9999987655 22 1 34688899984 332221111 1121
Q ss_pred CceEEeecCCCcccccC--CCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 128 GQCFFTGVPGSFYGRLF--PRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRS 205 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~--p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra 205 (370)
.+ +..+.|++...+. +++++|+++++.-+|+. +...||+.-.
T Consensus 221 ~~--v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~~~~----------------------------------~~~~~l~~~~ 264 (373)
T 2qm3_A 221 ED--IEIFTFDLRKPLPDYALHKFDTFITDPPETLE----------------------------------AIRAFVGRGI 264 (373)
T ss_dssp CC--EEEECCCTTSCCCTTTSSCBSEEEECCCSSHH----------------------------------HHHHHHHHHH
T ss_pred CC--EEEEEChhhhhchhhccCCccEEEECCCCchH----------------------------------HHHHHHHHHH
Confidence 12 2224457754332 24689999986433320 1256888888
Q ss_pred HhhccCceE-EEEeec
Q 017514 206 EELVAEGRM-VLTFLG 220 (370)
Q Consensus 206 ~EL~~GG~l-vl~~~g 220 (370)
+-|+|||++ ++.+..
T Consensus 265 ~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 265 ATLKGPRCAGYFGITR 280 (373)
T ss_dssp HTBCSTTCEEEEEECT
T ss_pred HHcccCCeEEEEEEec
Confidence 999999965 555543
|
| >3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=91.95 E-value=0.27 Score=47.96 Aligned_cols=26 Identities=12% Similarity=0.002 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHhhccCceEEEEeec
Q 017514 195 RDFSLFLKCRSEELVAEGRMVLTFLG 220 (370)
Q Consensus 195 ~D~~~fL~~Ra~EL~~GG~lvl~~~g 220 (370)
+++..++..-.+-|+|||.+++....
T Consensus 316 ~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 316 RGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp THHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 35556888888999999999987753
|
| >1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32 | Back alignment and structure |
|---|
Probab=91.67 E-value=0.63 Score=40.25 Aligned_cols=79 Identities=18% Similarity=0.209 Sum_probs=45.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
...+|+|+|||+|..++.+. +. + + -+|+..|.- +............ .+. +-
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~--------~~----~---~-~~v~~vD~~-----------~~~~~~a~~~~~~-~~~-~~ 99 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGAL--------LL----G---A-KEVICVEVD-----------KEAVDVLIENLGE-FKG-KF 99 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHH--------HT----T---C-SEEEEEESC-----------HHHHHHHHHHTGG-GTT-SE
T ss_pred CcCEEEEeeCCCCHHHHHHH--------Hc----C---C-CEEEEEECC-----------HHHHHHHHHHHHH-cCC-CE
Confidence 34699999999999887665 21 1 2 367888874 3222222221111 000 12
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccC
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQ 163 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~ 163 (370)
.|.. +++.. +| +++|++++.-.+|+.++
T Consensus 100 ~~~~---~d~~~--~~-~~~D~v~~~~p~~~~~~ 127 (207)
T 1wy7_A 100 KVFI---GDVSE--FN-SRVDIVIMNPPFGSQRK 127 (207)
T ss_dssp EEEE---SCGGG--CC-CCCSEEEECCCCSSSST
T ss_pred EEEE---CchHH--cC-CCCCEEEEcCCCccccC
Confidence 3333 36533 24 58999999988887654
|
| >2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A* | Back alignment and structure |
|---|
Probab=91.50 E-value=0.56 Score=44.77 Aligned_cols=30 Identities=17% Similarity=0.328 Sum_probs=23.3
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLP 98 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp 98 (370)
.-+|+|+|||+|..++. . + ...+|+..|+-
T Consensus 196 ~~~VLDlg~G~G~~~l~-a--------~---------~~~~V~~vD~s 225 (336)
T 2yx1_A 196 NDVVVDMFAGVGPFSIA-C--------K---------NAKKIYAIDIN 225 (336)
T ss_dssp TCEEEETTCTTSHHHHH-T--------T---------TSSEEEEEESC
T ss_pred CCEEEEccCccCHHHHh-c--------c---------CCCEEEEEECC
Confidence 46899999999999886 5 1 13678888874
|
| >3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A* | Back alignment and structure |
|---|
Probab=90.97 E-value=0.75 Score=48.70 Aligned_cols=116 Identities=16% Similarity=0.144 Sum_probs=65.3
Q ss_pred eEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHh---hCCCCCCCC
Q 017514 52 VAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQ---LGSASGAAG 128 (370)
Q Consensus 52 ~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~---~~~~~~~~~ 128 (370)
-+|+|+||++|..|+.+. .. | . -+|+..|+- +...+..++. .+.. ..+
T Consensus 541 ~~VLDlg~GtG~~sl~aa--------~~----g---a-~~V~aVD~s-----------~~al~~a~~N~~~ngl~--~~~ 591 (703)
T 3v97_A 541 KDFLNLFSYTGSATVHAG--------LG----G---A-RSTTTVDMS-----------RTYLEWAERNLRLNGLT--GRA 591 (703)
T ss_dssp CEEEEESCTTCHHHHHHH--------HT----T---C-SEEEEEESC-----------HHHHHHHHHHHHHTTCC--STT
T ss_pred CcEEEeeechhHHHHHHH--------HC----C---C-CEEEEEeCC-----------HHHHHHHHHHHHHcCCC--ccc
Confidence 589999999999888665 21 1 2 468888885 3322222111 1211 002
Q ss_pred ceEEeecCCCcccccC-CCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017514 129 QCFFTGVPGSFYGRLF-PRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~-p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~E 207 (370)
-.|+.+ +.++-+- ..+++|++++. |+....++... .+ .+..+|+..+++.-.+-
T Consensus 592 v~~i~~---D~~~~l~~~~~~fD~Ii~D---------PP~f~~~~~~~--------~~-----~~~~~~~~~ll~~a~~~ 646 (703)
T 3v97_A 592 HRLIQA---DCLAWLREANEQFDLIFID---------PPTFSNSKRME--------DA-----FDVQRDHLALMKDLKRL 646 (703)
T ss_dssp EEEEES---CHHHHHHHCCCCEEEEEEC---------CCSBC---------------C-----CBHHHHHHHHHHHHHHH
T ss_pred eEEEec---CHHHHHHhcCCCccEEEEC---------CccccCCccch--------hH-----HHHHHHHHHHHHHHHHh
Confidence 244444 5544222 45789999863 33222111000 00 12346777789888999
Q ss_pred hccCceEEEEeecc
Q 017514 208 LVAEGRMVLTFLGR 221 (370)
Q Consensus 208 L~~GG~lvl~~~g~ 221 (370)
|+|||+|++....+
T Consensus 647 LkpgG~L~~s~~~~ 660 (703)
T 3v97_A 647 LRAGGTIMFSNNKR 660 (703)
T ss_dssp EEEEEEEEEEECCT
T ss_pred cCCCcEEEEEECCc
Confidence 99999999777653
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=90.83 E-value=0.27 Score=50.57 Aligned_cols=79 Identities=16% Similarity=0.217 Sum_probs=50.5
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASG 125 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~ 125 (370)
+.+.||+|+|||.|..|..+. ++ | .+|.--|+- +.....-+. +.+. .
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la--------~~----g-----a~V~giD~~-----------~~~i~~a~~~a~~~~~-~- 114 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLA--------SK----G-----ATIVGIDFQ-----------QENINVCRALAEENPD-F- 114 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHH--------HT----T-----CEEEEEESC-----------HHHHHHHHHHHHTSTT-S-
T ss_pred CCCCeEEEECCCCcHHHHHHH--------hC----C-----CEEEEECCC-----------HHHHHHHHHHHHhcCC-C-
Confidence 456899999999998887665 32 3 678888875 333221111 1121 1
Q ss_pred CCCceEEeecCCCccccc---CCCCceeEEEeccccccccC
Q 017514 126 AAGQCFFTGVPGSFYGRL---FPRNSVHLFHSSYSLQWLSQ 163 (370)
Q Consensus 126 ~~~~~f~~~vpgSFy~~l---~p~~sv~~~~S~~alhWls~ 163 (370)
.--|..+ +. +.| ++++++|+|++.-.||++..
T Consensus 115 --~~~~~~~---~~-~~~~~~~~~~~fD~v~~~e~~ehv~~ 149 (569)
T 4azs_A 115 --AAEFRVG---RI-EEVIAALEEGEFDLAIGLSVFHHIVH 149 (569)
T ss_dssp --EEEEEEC---CH-HHHHHHCCTTSCSEEEEESCHHHHHH
T ss_pred --ceEEEEC---CH-HHHhhhccCCCccEEEECcchhcCCC
Confidence 2245555 33 333 46789999999999999654
|
| >3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A* | Back alignment and structure |
|---|
Probab=90.72 E-value=1.4 Score=41.19 Aligned_cols=32 Identities=19% Similarity=0.190 Sum_probs=25.1
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLP 98 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp 98 (370)
--+|+|+|||+|+.|+.+. ++ | .-+|+..|+-
T Consensus 126 g~~VlD~~aG~G~~~i~~a--------~~----g----~~~V~avD~n 157 (278)
T 3k6r_A 126 DELVVDMFAGIGHLSLPIA--------VY----G----KAKVIAIEKD 157 (278)
T ss_dssp TCEEEETTCTTTTTTHHHH--------HH----T----CCEEEEECCC
T ss_pred CCEEEEecCcCcHHHHHHH--------Hh----c----CCeEEEEECC
Confidence 4689999999999999776 32 1 2578999985
|
| >3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei} | Back alignment and structure |
|---|
Probab=90.42 E-value=1.2 Score=45.72 Aligned_cols=21 Identities=19% Similarity=0.229 Sum_probs=18.9
Q ss_pred HHHHHHHHhhccCceEEEEee
Q 017514 199 LFLKCRSEELVAEGRMVLTFL 219 (370)
Q Consensus 199 ~fL~~Ra~EL~~GG~lvl~~~ 219 (370)
.|+.+-.+-|+|||+++++++
T Consensus 376 ~Fl~~~l~~Lk~gGr~aiVlP 396 (544)
T 3khk_A 376 AWMLHMLYHLAPTGSMALLLA 396 (544)
T ss_dssp HHHHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHHHhccCceEEEEec
Confidence 489888999999999999986
|
| >3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A* | Back alignment and structure |
|---|
Probab=90.31 E-value=0.87 Score=44.08 Aligned_cols=76 Identities=14% Similarity=-0.024 Sum_probs=43.9
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~~ 127 (370)
..+|+|+|||+|..++.+. .. + +..+|+-.|+- +.....-+. ..+.. .
T Consensus 218 ~~~vLD~gCGsG~~~i~~a--------~~----~---~~~~v~g~Dis-----------~~~l~~A~~n~~~~gl~---~ 268 (373)
T 3tm4_A 218 GGSVLDPMCGSGTILIELA--------LR----R---YSGEIIGIEKY-----------RKHLIGAEMNALAAGVL---D 268 (373)
T ss_dssp SCCEEETTCTTCHHHHHHH--------HT----T---CCSCEEEEESC-----------HHHHHHHHHHHHHTTCG---G
T ss_pred CCEEEEccCcCcHHHHHHH--------Hh----C---CCCeEEEEeCC-----------HHHHHHHHHHHHHcCCC---C
Confidence 4689999999998877655 22 1 22367888874 322221111 11210 0
Q ss_pred CceEEeecCCCcccccCCCCceeEEEecccc
Q 017514 128 GQCFFTGVPGSFYGRLFPRNSVHLFHSSYSL 158 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~p~~sv~~~~S~~al 158 (370)
.-.|..+ ++.+--+|++++|+++++--+
T Consensus 269 ~i~~~~~---D~~~~~~~~~~fD~Ii~npPy 296 (373)
T 3tm4_A 269 KIKFIQG---DATQLSQYVDSVDFAISNLPY 296 (373)
T ss_dssp GCEEEEC---CGGGGGGTCSCEEEEEEECCC
T ss_pred ceEEEEC---ChhhCCcccCCcCEEEECCCC
Confidence 1244444 765544567899999996443
|
| >1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24 | Back alignment and structure |
|---|
Probab=90.29 E-value=1.3 Score=41.21 Aligned_cols=80 Identities=13% Similarity=0.102 Sum_probs=45.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCC-CC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGA-AG 128 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~-~~ 128 (370)
..-+|+|+|||+|..|..+. ++ + .+|+.-|+- +.......+..... +. .+
T Consensus 28 ~~~~VLDiG~G~G~lt~~L~--------~~----~-----~~v~~vD~~-----------~~~~~~a~~~~~~~-~~~~~ 78 (285)
T 1zq9_A 28 PTDVVLEVGPGTGNMTVKLL--------EK----A-----KKVVACELD-----------PRLVAELHKRVQGT-PVASK 78 (285)
T ss_dssp TTCEEEEECCTTSTTHHHHH--------HH----S-----SEEEEEESC-----------HHHHHHHHHHHTTS-TTGGG
T ss_pred CCCEEEEEcCcccHHHHHHH--------hh----C-----CEEEEEECC-----------HHHHHHHHHHHHhc-CCCCc
Confidence 34689999999999998776 32 1 356666764 33222222221110 00 01
Q ss_pred ceEEeecCCCcccccCCCCceeEEEeccccccccC
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQ 163 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~ 163 (370)
-.++. +++..- |-.++|.++++...||.+.
T Consensus 79 v~~~~---~D~~~~--~~~~fD~vv~nlpy~~~~~ 108 (285)
T 1zq9_A 79 LQVLV---GDVLKT--DLPFFDTCVANLPYQISSP 108 (285)
T ss_dssp EEEEE---SCTTTS--CCCCCSEEEEECCGGGHHH
T ss_pred eEEEE---cceecc--cchhhcEEEEecCcccchH
Confidence 23433 366332 2237899999988888543
|
| >3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=90.01 E-value=0.56 Score=43.29 Aligned_cols=49 Identities=18% Similarity=0.345 Sum_probs=32.2
Q ss_pred ceEEEeecCCCCcchHHHHH------------HHHHHHHHHHHhcCCCCCcceEEeCCCCCCchH
Q 017514 51 KVAIADLGCSSGPNTLLVAS------------ELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFN 103 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~------------~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFn 103 (370)
.-+|+|+|||+|..|..+.. ..++.+++++.. .+.++++..|...-||.
T Consensus 30 ~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~----~~~v~~i~~D~~~~~~~ 90 (255)
T 3tqs_A 30 TDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQ----QKNITIYQNDALQFDFS 90 (255)
T ss_dssp TCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTT----CTTEEEEESCTTTCCGG
T ss_pred cCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhh----CCCcEEEEcchHhCCHH
Confidence 46899999999999998773 344555544321 23467777776554443
|
| >3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus} | Back alignment and structure |
|---|
Probab=89.95 E-value=8.6 Score=41.49 Aligned_cols=24 Identities=17% Similarity=0.088 Sum_probs=20.9
Q ss_pred HHHHHHHHHHhhccCceEEEEeec
Q 017514 197 FSLFLKCRSEELVAEGRMVLTFLG 220 (370)
Q Consensus 197 ~~~fL~~Ra~EL~~GG~lvl~~~g 220 (370)
...|+.+-.+-|++||+++++++.
T Consensus 444 y~aFIe~Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 444 EALFLELVTELVQDGTVISAIMPK 467 (878)
T ss_dssp HHHHHHHHHHHSCTTCEEEEEEET
T ss_pred HHHHHHHHHHhcCCCcEEEEEECh
Confidence 556899889999999999999973
|
| >3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A* | Back alignment and structure |
|---|
Probab=89.82 E-value=5.5 Score=37.32 Aligned_cols=19 Identities=32% Similarity=0.527 Sum_probs=16.3
Q ss_pred ceEEEeecCCCCcchHHHH
Q 017514 51 KVAIADLGCSSGPNTLLVA 69 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~ 69 (370)
..+|+|||||.|..|..++
T Consensus 75 ~~~VLDLGaAPGGWSQvAa 93 (277)
T 3evf_A 75 EGRVIDLGCGRGGWCYYAA 93 (277)
T ss_dssp CEEEEEETCTTCHHHHHHH
T ss_pred CCEEEEecCCCCHHHHHHH
Confidence 4589999999999988665
|
| >3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A* | Back alignment and structure |
|---|
Probab=89.65 E-value=0.95 Score=42.75 Aligned_cols=77 Identities=13% Similarity=0.059 Sum_probs=45.3
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCce
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (370)
.-+|+|+|||+|..|..+. ++. -+|+.-|+- +.......+..... .+-.
T Consensus 51 ~~~VLEIG~G~G~lT~~La--------~~~---------~~V~aVEid-----------~~li~~a~~~~~~~---~~v~ 99 (295)
T 3gru_A 51 DDVVLEIGLGKGILTEELA--------KNA---------KKVYVIEID-----------KSLEPYANKLKELY---NNIE 99 (295)
T ss_dssp TCEEEEECCTTSHHHHHHH--------HHS---------SEEEEEESC-----------GGGHHHHHHHHHHC---SSEE
T ss_pred cCEEEEECCCchHHHHHHH--------hcC---------CEEEEEECC-----------HHHHHHHHHHhccC---CCeE
Confidence 4689999999999999877 221 345555653 22222222211100 0223
Q ss_pred EEeecCCCcccccCCCCceeEEEeccccccc
Q 017514 131 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWL 161 (370)
Q Consensus 131 f~~~vpgSFy~~l~p~~sv~~~~S~~alhWl 161 (370)
++.| ++..--+|+.+.|.++++...||-
T Consensus 100 vi~g---D~l~~~~~~~~fD~Iv~NlPy~is 127 (295)
T 3gru_A 100 IIWG---DALKVDLNKLDFNKVVANLPYQIS 127 (295)
T ss_dssp EEES---CTTTSCGGGSCCSEEEEECCGGGH
T ss_pred EEEC---chhhCCcccCCccEEEEeCccccc
Confidence 4444 765545666778999988777773
|
| >2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A* | Back alignment and structure |
|---|
Probab=87.00 E-value=1.8 Score=42.93 Aligned_cols=19 Identities=21% Similarity=0.211 Sum_probs=16.5
Q ss_pred ceEEEeecCCCCcchHHHH
Q 017514 51 KVAIADLGCSSGPNTLLVA 69 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~ 69 (370)
.-+|+|+|||+|..++.+.
T Consensus 291 ~~~VLDlgcG~G~~sl~la 309 (425)
T 2jjq_A 291 GEKILDMYSGVGTFGIYLA 309 (425)
T ss_dssp SSEEEEETCTTTHHHHHHH
T ss_pred CCEEEEeeccchHHHHHHH
Confidence 4689999999999998765
|
| >2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=86.07 E-value=1.2 Score=41.79 Aligned_cols=76 Identities=13% Similarity=0.173 Sum_probs=43.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHh---hCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQ---LGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~---~~~~~~~ 126 (370)
..-+|+|+|||+|..|..+. ++ .-+|+.-|+- +.......+. .+..
T Consensus 42 ~~~~VLDiG~G~G~lt~~La--------~~---------~~~v~~vDi~-----------~~~~~~a~~~~~~~~~~--- 90 (299)
T 2h1r_A 42 SSDIVLEIGCGTGNLTVKLL--------PL---------AKKVITIDID-----------SRMISEVKKRCLYEGYN--- 90 (299)
T ss_dssp TTCEEEEECCTTSTTHHHHT--------TT---------SSEEEEECSC-----------HHHHHHHHHHHHHTTCC---
T ss_pred CcCEEEEEcCcCcHHHHHHH--------hc---------CCEEEEEECC-----------HHHHHHHHHHHHHcCCC---
Confidence 34699999999999998765 21 1467777764 3222222211 1211
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEecccccccc
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLS 162 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls 162 (370)
+-.| +-|++.. +|..++|+++++...||.+
T Consensus 91 -~v~~---~~~D~~~--~~~~~~D~Vv~n~py~~~~ 120 (299)
T 2h1r_A 91 -NLEV---YEGDAIK--TVFPKFDVCTANIPYKISS 120 (299)
T ss_dssp -CEEC-------CCS--SCCCCCSEEEEECCGGGHH
T ss_pred -ceEE---EECchhh--CCcccCCEEEEcCCccccc
Confidence 1233 3346633 2345899999998888754
|
| >3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str} | Back alignment and structure |
|---|
Probab=85.18 E-value=12 Score=36.36 Aligned_cols=21 Identities=24% Similarity=0.245 Sum_probs=16.4
Q ss_pred CceEEEeecCCCCcchHHHHH
Q 017514 50 TKVAIADLGCSSGPNTLLVAS 70 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~ 70 (370)
...+|+|.|||+|...+....
T Consensus 201 ~~~~vlDp~CGSGt~~ieaa~ 221 (393)
T 3k0b_A 201 PDRPFYDPVCGSGTIPIEAAL 221 (393)
T ss_dssp TTSCEEETTCTTSHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHH
Confidence 347899999999988765543
|
| >2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45 | Back alignment and structure |
|---|
Probab=84.66 E-value=2.2 Score=42.25 Aligned_cols=22 Identities=23% Similarity=0.225 Sum_probs=18.8
Q ss_pred HHHHHHHHhhccCceEEEEeec
Q 017514 199 LFLKCRSEELVAEGRMVLTFLG 220 (370)
Q Consensus 199 ~fL~~Ra~EL~~GG~lvl~~~g 220 (370)
.||++-.+-|+|||+++++++.
T Consensus 288 ~fl~~~~~~Lk~gG~~a~V~p~ 309 (445)
T 2okc_A 288 NFLQHMMLMLKTGGRAAVVLPD 309 (445)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEH
T ss_pred HHHHHHHHHhccCCEEEEEECC
Confidence 4788888899999999999863
|
| >3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A* | Back alignment and structure |
|---|
Probab=84.56 E-value=1.1 Score=41.75 Aligned_cols=18 Identities=17% Similarity=0.209 Sum_probs=16.6
Q ss_pred EEEeecCCCCcchHHHHH
Q 017514 53 AIADLGCSSGPNTLLVAS 70 (370)
Q Consensus 53 ~IaD~Gcs~G~Ns~~~~~ 70 (370)
+|+|+|||+|..|..+..
T Consensus 49 ~VLEIG~G~G~lt~~L~~ 66 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLE 66 (271)
T ss_dssp CEEEECCTTSHHHHHHHH
T ss_pred eEEEEeCchHHHHHHHHH
Confidence 999999999999998874
|
| >3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=84.18 E-value=6.1 Score=38.42 Aligned_cols=21 Identities=24% Similarity=0.275 Sum_probs=16.8
Q ss_pred CceEEEeecCCCCcchHHHHH
Q 017514 50 TKVAIADLGCSSGPNTLLVAS 70 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~ 70 (370)
...+|+|.|||+|...+.+..
T Consensus 195 ~~~~vlDp~CGSGt~lieaa~ 215 (385)
T 3ldu_A 195 AGRVLVDPMCGSGTILIEAAM 215 (385)
T ss_dssp TTSCEEETTCTTCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHH
Confidence 347899999999988776553
|
| >3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=82.30 E-value=20 Score=34.82 Aligned_cols=21 Identities=24% Similarity=0.317 Sum_probs=16.4
Q ss_pred CceEEEeecCCCCcchHHHHH
Q 017514 50 TKVAIADLGCSSGPNTLLVAS 70 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~ 70 (370)
...+|+|.+||+|...+....
T Consensus 194 ~~~~llDp~CGSGt~lIEAa~ 214 (384)
T 3ldg_A 194 PDKPFVDPTCGSGTFCIEAAM 214 (384)
T ss_dssp TTSCEEETTCTTSHHHHHHHH
T ss_pred CCCeEEEeCCcCCHHHHHHHH
Confidence 347899999999988765553
|
| >1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A | Back alignment and structure |
|---|
Probab=80.35 E-value=1.3 Score=40.03 Aligned_cols=20 Identities=25% Similarity=0.330 Sum_probs=17.3
Q ss_pred CceEEEeecCCCCcchHHHH
Q 017514 50 TKVAIADLGCSSGPNTLLVA 69 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~ 69 (370)
..-+|+|+|||+|..|..+.
T Consensus 30 ~~~~VLDiG~G~G~lt~~l~ 49 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLELV 49 (244)
T ss_dssp TTCEEEEECCTTSHHHHHHH
T ss_pred CCCEEEEEeCCchHHHHHHH
Confidence 34689999999999998776
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 370 | ||||
| d1m6ex_ | 359 | c.66.1.35 (X:) Salicylic acid carboxyl methyltrans | 1e-170 |
| >d1m6ex_ c.66.1.35 (X:) Salicylic acid carboxyl methyltransferase (SAMT) {Clarkia breweri [TaxId: 36903]} Length = 359 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Salicylic acid carboxyl methyltransferase (SAMT) domain: Salicylic acid carboxyl methyltransferase (SAMT) species: Clarkia breweri [TaxId: 36903]
Score = 477 bits (1230), Expect = e-170
Identities = 224/370 (60%), Positives = 276/370 (74%), Gaps = 16/370 (4%)
Query: 1 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSPTK-VAIADLGC 59
M+V QVLHM GG G SYA NS +Q +VISI KPITE A+T L+ + T +AIADLGC
Sbjct: 1 MDVRQVLHMKGGAGENSYAMNSFIQRQVISITKPITEAAITALYSGDTVTTRLAIADLGC 60
Query: 60 SSGPNTLLVASELIKVVNKICDKLGSQ-LPEFQVFLNDLPGNDFNTIFRSLASFQKILRK 118
SSGPN L +ELIK V ++ K+G + PE+Q+FLNDLPGNDFN IFRSL +
Sbjct: 61 SSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDV--- 117
Query: 119 QLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMA 178
G CF GVPGSFYGRLFPRN++H HSSYSL WLSQVP G+ESNKGNI+MA
Sbjct: 118 --------DGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMA 169
Query: 179 STSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELL 238
+T P VL AYY+QFQ D +LFL+CR++E+V GRMVLT LGR+S+D +S ECC IW+LL
Sbjct: 170 NTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRASTECCLIWQLL 229
Query: 239 ATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQN 298
A ALN MVSEGLIEEEK++ FNIPQYTPSP E+++E++KEGSF IDH+E SE+ W++
Sbjct: 230 AMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCTK 289
Query: 299 GFKFNEAVDAFNDGGYNVANCMRAVAEPLLVSQFGEAIIDELFKRYREIVADRMSKEKTK 358
+V+ GYNVA CMRAVAEPLL+ FGEAII+++F RY+ ++ +RMSKEKTK
Sbjct: 290 DGDGGGSVEEE---GYNVARCMRAVAEPLLLDHFGEAIIEDVFHRYKLLIIERMSKEKTK 346
Query: 359 FINVTVSLTK 368
FINV VSL +
Sbjct: 347 FINVIVSLIR 356
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 370 | |||
| d1m6ex_ | 359 | Salicylic acid carboxyl methyltransferase (SAMT) { | 100.0 | |
| d2a14a1 | 257 | Indolethylamine N-methyltransferase, INMT {Human ( | 99.15 | |
| d1im8a_ | 225 | Hypothetical protein HI0319 (YecO) {Haemophilus in | 99.09 | |
| d1xtpa_ | 254 | Hypothetical protein Lmaj004091aaa (LmjF30.0810) { | 99.01 | |
| d1vl5a_ | 231 | Hypothetical protein BH2331 {Bacillus halodurans [ | 99.01 | |
| d1tw3a2 | 253 | Carminomycin 4-O-methyltransferase {Streptomyces p | 98.99 | |
| d1jqea_ | 280 | Histamine methyltransferase {Human (Homo sapiens) | 98.99 | |
| d1ve3a1 | 226 | Hypothetical protein PH0226 {Archaeon Pyrococcus h | 98.97 | |
| d1xxla_ | 234 | Hypothetical protein YcgJ {Bacillus subtilis [TaxI | 98.96 | |
| d2o57a1 | 282 | Putative sarcosine dimethylglycine methyltransfera | 98.93 | |
| d2fk8a1 | 280 | Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri | 98.91 | |
| d2g72a1 | 263 | Phenylethanolamine N-methyltransferase, PNMTase {H | 98.9 | |
| d1nkva_ | 245 | Hypothetical Protein YjhP {Escherichia coli [TaxId | 98.89 | |
| d2ex4a1 | 222 | Adrenal gland protein AD-003 (C9orf32) {Human (Hom | 98.89 | |
| d1qzza2 | 256 | Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu | 98.82 | |
| d1vlma_ | 208 | Possible histamine N-methyltransferase TM1293 {The | 98.76 | |
| d1kpia_ | 291 | CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | 98.76 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 98.7 | |
| d2p7ia1 | 225 | Hypothetical protein ECA1738 {Erwinia carotovora [ | 98.68 | |
| d1p91a_ | 268 | rRNA methyltransferase RlmA {Escherichia coli [Tax | 98.6 | |
| d1fp1d2 | 244 | Chalcone O-methyltransferase {Alfalfa (Medicago sa | 98.58 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 98.57 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 98.55 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 98.52 | |
| d1kpga_ | 285 | CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | 98.49 | |
| d2avna1 | 246 | Hypothetical methyltransferase TM1389 {Thermotoga | 98.38 | |
| d1ri5a_ | 252 | mRNA cap (Guanine N-7) methyltransferase {Fungus ( | 98.36 | |
| d2gh1a1 | 281 | Methyltransferase BC2162 {Bacillus cereus [TaxId: | 98.33 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 98.33 | |
| d1kyza2 | 243 | Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltra | 98.29 | |
| d1fp2a2 | 244 | Isoflavone O-methyltransferase {Alfalfa (Medicago | 98.2 | |
| d1g8sa_ | 230 | Fibrillarin homologue {Archaeon Methanococcus jann | 97.99 | |
| d2fcaa1 | 204 | tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil | 97.97 | |
| d1yb2a1 | 250 | Hypothetical protein Ta0852 {Thermoplasma acidophi | 97.9 | |
| d1xvaa_ | 292 | Glycine N-methyltransferase {Rat (Rattus norvegicu | 97.8 | |
| d1yzha1 | 204 | tRNA (guanine-N(7)-)-methyltransferase TrmB {Strep | 97.79 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 97.76 | |
| d1g6q1_ | 328 | Arginine methyltransferase, HMT1 {Baker's yeast (S | 97.57 | |
| d1nt2a_ | 209 | Fibrillarin homologue {Archaeon Archaeoglobus fulg | 97.55 | |
| d1i1na_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Human ( | 97.45 | |
| d1g8aa_ | 227 | Fibrillarin homologue {Archaeon Pyrococcus horikos | 97.42 | |
| d1dusa_ | 194 | Hypothetical protein MJ0882 {Archaeon Methanococcu | 97.39 | |
| d1oria_ | 316 | Protein arginine N-methyltransferase 1, PRMT1 {Rat | 97.38 | |
| d1i9ga_ | 264 | Probable methyltransferase Rv2118c {Mycobacterium | 97.37 | |
| d2fyta1 | 311 | Protein arginine N-methyltransferase 3, PRMT3 {Hum | 97.36 | |
| d2nxca1 | 254 | PrmA-like protein TTHA0656 (TT0836) {Thermus therm | 97.22 | |
| d1zx0a1 | 229 | Guanidinoacetate methyltransferase {Human (Homo sa | 97.22 | |
| d1nw3a_ | 328 | Catalytic, N-terminal domain of histone methyltran | 97.01 | |
| d2b3ta1 | 274 | N5-glutamine methyltransferase, HemK {Escherichia | 96.98 | |
| d1l3ia_ | 186 | Precorrin-6Y methyltransferase (CbiT) {Archaeon Me | 96.89 | |
| d1u2za_ | 406 | Catalytic, N-terminal domain of histone methyltran | 96.85 | |
| d1vbfa_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Sulfolo | 96.72 | |
| d1o54a_ | 266 | Hypothetical protein TM0748 {Thermotoga maritima [ | 96.62 | |
| d1r18a_ | 223 | Protein-L-isoaspartyl O-methyltransferase {Fruit f | 96.43 | |
| d1af7a2 | 193 | Chemotaxis receptor methyltransferase CheR, C-term | 95.95 | |
| d2b25a1 | 324 | Hypothetical protein FLJ20628 {Human (Homo sapiens | 95.86 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 95.04 | |
| d1nv8a_ | 271 | N5-glutamine methyltransferase, HemK {Thermotoga m | 94.76 | |
| d1wxxa2 | 318 | Hypothetical protein TTHA1280, middle and C-termin | 93.61 | |
| d2frna1 | 260 | Hypothetical protein PH0793 {Pyrococcus horikoshii | 93.33 | |
| d1m6ya2 | 192 | TM0872, methyltransferase domain {Thermotoga marit | 92.53 | |
| d2h00a1 | 250 | Methyltransferase 10 domain containing protein MET | 92.36 | |
| d2as0a2 | 324 | Hypothetical protein PH1915, middle and C-terminal | 91.72 | |
| d2f8la1 | 328 | Hypothetical protein Lmo1582 {Listeria monocytogen | 89.75 | |
| d1ws6a1 | 171 | Methyltransferase TTHA0928 {Thermus thermophilus [ | 85.3 | |
| d1ne2a_ | 197 | Hypothetical protein Ta1320 {Archaeon Thermoplasma | 82.7 | |
| d1wy7a1 | 201 | Hypothetical protein PH1948 {Archaeon Pyrococcus h | 81.21 | |
| d2b78a2 | 317 | Hypothetical protein SMu776, middle and C-terminal | 80.02 |
| >d1m6ex_ c.66.1.35 (X:) Salicylic acid carboxyl methyltransferase (SAMT) {Clarkia breweri [TaxId: 36903]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Salicylic acid carboxyl methyltransferase (SAMT) domain: Salicylic acid carboxyl methyltransferase (SAMT) species: Clarkia breweri [TaxId: 36903]
Probab=100.00 E-value=5.2e-113 Score=840.82 Aligned_cols=356 Identities=63% Similarity=1.075 Sum_probs=334.1
Q ss_pred CcccceeeccCCCCCchhHhhhHHHHHHHHHhHHHHHHHHHhhccc-CCCCceEEEeecCCCCcchHHHHHHHHHHHHHH
Q 017514 1 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCS-TSPTKVAIADLGCSSGPNTLLVASELIKVVNKI 79 (370)
Q Consensus 1 m~~~~~l~M~gg~G~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~-~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~ 79 (370)
|+++++|||+||||++||++||.+|+++++.++|+|++||.++... ..+++++|||||||+|+||+.+|+.||++|+++
T Consensus 1 m~~~~~l~M~gG~G~~SYa~NS~~Q~~~i~~~kp~leeai~~~~~~~~~~~~~~IADlGCS~G~Ntl~~v~~iI~~i~~~ 80 (359)
T d1m6ex_ 1 MDVRQVLHMKGGAGENSYAMNSFIQRQVISITKPITEAAITALYSGDTVTTRLAIADLGCSSGPNALFAVTELIKTVEEL 80 (359)
T ss_dssp CCCHHHHCCCCCTTSTTTTSSCHHHHHHHHHTHHHHHHHHHHHHSSSSSSSEECCEEESCCSSTTTTTGGGTTHHHHHHH
T ss_pred CCccEeeccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCceEEEEeCCCCCccHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999998654 367899999999999999999999999999999
Q ss_pred HHhcCC-CCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCceEEeecCCCcccccCCCCceeEEEecccc
Q 017514 80 CDKLGS-QLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSL 158 (370)
Q Consensus 80 ~~~~~~-~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~al 158 (370)
|++.+. ++|+|||||||||+||||+||++||.. .... ++||++|||||||+||||++||||+||++||
T Consensus 81 ~~~~~~~~~pe~qvf~nDLP~NDFNtLF~~L~~~--------~~~~---~~~f~~gvpGSFY~rLfP~~Slh~~~Ss~al 149 (359)
T d1m6ex_ 81 RKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIE--------NDVD---GVCFINGVPGSFYGRLFPRNTLHFIHSSYSL 149 (359)
T ss_dssp HHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTS--------CSCT---TCEEEEEEESCSSSCCSCTTCBSCEEEESCT
T ss_pred HHhcCCCCCCeEEEEeCCCCcchHHHHHHhcccc--------ccCC---CCeEEEecCCchhhhcCCCCceEEeeehhhh
Confidence 987765 578999999999999999999999852 2222 6899999999999999999999999999999
Q ss_pred ccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeccCCCCCCCchhhhHHHHH
Q 017514 159 QWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELL 238 (370)
Q Consensus 159 hWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l 238 (370)
||||++|+.+.+|||+||+..+++++|.+||++||++||.+||++||+||+|||+|||+++||++.++.+++.+.+|++|
T Consensus 150 HWLS~vP~~l~~n~~~i~~~~~~~~~v~~ay~~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~~~~~~~~~~l 229 (359)
T d1m6ex_ 150 MWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRASTECCLIWQLL 229 (359)
T ss_dssp TBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEECSSSSSSSTTTSTTTHHH
T ss_pred hhhhcCCccccCCCCcEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeccCCCCCCCCccchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998887777899999
Q ss_pred HHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEEEeecccccccCccccccccccccccchhhh
Q 017514 239 ATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWNAYQNGFKFNEAVDAFNDGGYNVAN 318 (370)
Q Consensus 239 ~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~~~~w~~~~~~~~~~D~~~~~~~~a~~~a~ 318 (370)
.++|+|||+||+|++||+|+||+|+|+||++|++++|+++|+|+|+++|+++.+|+++.+.. |...+...+|+.+++
T Consensus 230 ~~al~dmv~eGlI~eek~dsfn~P~Y~ps~eEv~~~ie~~gsF~i~~~e~~~~~~~~~~~~~---~~~~d~~~~~~~~a~ 306 (359)
T d1m6ex_ 230 AMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCTKDG---DGGGSVEEEGYNVAR 306 (359)
T ss_dssp HHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEEEEEEETTCCSSCT---TCCSSTTTTTTHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHhccCccccCCHHHHHHHhccCCCeeeeeeEeeecccccccccc---cccccHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999875532 212336788999999
Q ss_pred hhHhhhhhHHHHhhChhHHHHHHHHHHHHHHhhhhhcCCcEEEEEEEEEecC
Q 017514 319 CMRAVAEPLLVSQFGEAIIDELFKRYREIVADRMSKEKTKFINVTVSLTKIG 370 (370)
Q Consensus 319 ~~RA~~epll~~hfg~~i~Delf~r~~~~v~~~~~~~~~~~~~~~~~L~r~~ 370 (370)
++|||+||+|++|||++|+|+||+||+++++++++++++++++++++|+||+
T Consensus 307 ~~RA~~e~~l~~hfg~~i~D~lF~r~~~~v~~~~~~~~~~~~~~~~sL~rK~ 358 (359)
T d1m6ex_ 307 CMRAVAEPLLLDHFGEAIIEDVFHRYKLLIIERMSKEKTKFINVIVSLIRKS 358 (359)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHSSCCEEEEEEEEEEBCC
T ss_pred HHHHHHHHHHHHHcChHHHHHHHHHHHHHHHhhHhhcCCceEEEEEEEEecC
Confidence 9999999999999999999999999999999999999999999999999995
|
| >d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arylamine N-methyltransferase domain: Indolethylamine N-methyltransferase, INMT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.15 E-value=1.3e-10 Score=105.00 Aligned_cols=101 Identities=15% Similarity=0.045 Sum_probs=77.4
Q ss_pred cCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceE
Q 017514 135 VPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRM 214 (370)
Q Consensus 135 vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~l 214 (370)
+..+.....+|.+++|+++|..+|||+...+ +|+..+|+.-++-|+|||.|
T Consensus 139 ~~~~~~~~~~~~~~fD~i~~~~~l~~~~~~~-----------------------------~~~~~~l~~i~~~LkpGG~l 189 (257)
T d2a14a1 139 VHLGNPLAPAVLPLADCVLTLLAMECACCSL-----------------------------DAYRAALCNLASLLKPGGHL 189 (257)
T ss_dssp TTSSSTTTTCCCCCEEEEEEESCHHHHCSSH-----------------------------HHHHHHHHHHHTTEEEEEEE
T ss_pred cccccccccccCCcccEEeehhhHHHhcccH-----------------------------HHHHHHHHHHHhccCCCcEE
Confidence 4445556678999999999999999975422 46777999999999999999
Q ss_pred EEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEEEeeccc
Q 017514 215 VLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVNWN 294 (370)
Q Consensus 215 vl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~~~~w~ 294 (370)
++......+.- .......+.+..+.+|++.+++++| |+|..++.....++
T Consensus 190 i~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~~~~~~ 239 (257)
T d2a14a1 190 VTTVTLRLPSY-----------------------------MVGKREFSCVALEKGEVEQAVLDAG-FDIEQLLHSPQSYS 239 (257)
T ss_dssp EEEEESSCCEE-----------------------------EETTEEEECCCCCHHHHHHHHHHTT-EEEEEEEEECCCCC
T ss_pred EEEEecccccc-----------------------------eeccccccccCCCHHHHHHHHHHCC-CEEEEEEEeccccc
Confidence 99877543210 0112245677889999999999999 99999988866554
|
| >d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein HI0319 (YecO) domain: Hypothetical protein HI0319 (YecO) species: Haemophilus influenzae [TaxId: 727]
Probab=99.09 E-value=8.4e-10 Score=98.44 Aligned_cols=164 Identities=20% Similarity=0.191 Sum_probs=99.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhh-CCCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAAG 128 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~-~~~~~~~~ 128 (370)
..-+|+|+|||+|..|+.+. +. ...|..+|+.-|+- +.+.+.-+++. ... .
T Consensus 39 ~~~~vLDlGCGtG~~~~~l~--------~~-----~~~~~~~v~giD~S-----------~~ml~~A~~~~~~~~----~ 90 (225)
T d1im8a_ 39 ADSNVYDLGCSRGAATLSAR--------RN-----INQPNVKIIGIDNS-----------QPMVERCRQHIAAYH----S 90 (225)
T ss_dssp TTCEEEEESCTTCHHHHHHH--------HT-----CCCSSCEEEEECSC-----------HHHHHHHHHHHHTSC----C
T ss_pred CCCEEEEeccchhhHHHHHH--------Hh-----hcCCCCceEEeCCC-----------HHHHHHHHHHhHhhc----c
Confidence 34689999999999988666 32 12367899999986 44433332221 111 1
Q ss_pred ceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
...+.-.-+++. =+|.+..|++++++++||++. +|...+|+.-.+-|
T Consensus 91 ~~~~~~~~~d~~--~~~~~~~d~i~~~~~l~~~~~-------------------------------~d~~~~l~~i~~~L 137 (225)
T d1im8a_ 91 EIPVEILCNDIR--HVEIKNASMVILNFTLQFLPP-------------------------------EDRIALLTKIYEGL 137 (225)
T ss_dssp SSCEEEECSCTT--TCCCCSEEEEEEESCGGGSCG-------------------------------GGHHHHHHHHHHHE
T ss_pred cchhhhccchhh--ccccccceeeEEeeeccccCh-------------------------------hhHHHHHHHHHHhC
Confidence 111122223442 246678899999999999643 34556889999999
Q ss_pred ccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhc----cCCcCcccCCHHHHHHHHHhcCceE
Q 017514 209 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVN----CFNIPQYTPSPAEIKSEVIKEGSFT 282 (370)
Q Consensus 209 ~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d----~f~~P~y~~s~eE~~~~ie~~GsF~ 282 (370)
+|||.|++.-....+.. . .-..+...+..+....-.++.+.. .+..-.+..|.+|++..+++.| |+
T Consensus 138 kpgG~li~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~L~~aG-F~ 207 (225)
T d1im8a_ 138 NPNGVLVLSEKFRFEDT----K---INHLLIDLHHQFKRANGYSELEVSQKRTALENVMRTDSIETHKVRLKNVG-FS 207 (225)
T ss_dssp EEEEEEEEEEECCCSSH----H---HHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCCCHHHHHHHHHHHT-CS
T ss_pred CCCceeecccccccccc----h---hhhHHHHHHHHHHHHcCCCHHHHHHHHHHhhcccCCCCHHHHHHHHHHcC-CC
Confidence 99999999765544331 1 112233333333333223333322 1111234569999999999999 85
|
| >d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: AD-003 protein-like domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810) species: Leishmania major [TaxId: 5664]
Probab=99.01 E-value=2.6e-09 Score=97.77 Aligned_cols=145 Identities=16% Similarity=0.119 Sum_probs=95.1
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (370)
.+..+|+|+|||+|+.|..++ .+. . -+|..-|.- +.+.+..+++.... .
T Consensus 92 ~~~~~vLD~GcG~G~~t~~ll--------~~~-------~-~~v~~vD~s-----------~~~l~~a~~~~~~~----~ 140 (254)
T d1xtpa_ 92 HGTSRALDCGAGIGRITKNLL--------TKL-------Y-ATTDLLEPV-----------KHMLEEAKRELAGM----P 140 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTH--------HHH-------C-SEEEEEESC-----------HHHHHHHHHHTTTS----S
T ss_pred CCCCeEEEecccCChhhHHHH--------hhc-------C-ceEEEEcCC-----------HHHHHhhhcccccc----c
Confidence 356899999999999988665 221 1 256666764 44433333332221 2
Q ss_pred c-eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017514 129 Q-CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (370)
Q Consensus 129 ~-~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~E 207 (370)
. -|..+ ++.+--++++++|+++|.++|||+.. .|+..||+.-++-
T Consensus 141 ~~~~~~~---d~~~~~~~~~~fD~I~~~~vl~hl~d-------------------------------~d~~~~l~~~~~~ 186 (254)
T d1xtpa_ 141 VGKFILA---SMETATLPPNTYDLIVIQWTAIYLTD-------------------------------ADFVKFFKHCQQA 186 (254)
T ss_dssp EEEEEES---CGGGCCCCSSCEEEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHH
T ss_pred cceeEEc---cccccccCCCccceEEeeccccccch-------------------------------hhhHHHHHHHHHh
Confidence 2 24333 66443457889999999999999643 3566789999999
Q ss_pred hccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEE
Q 017514 208 LVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLE 287 (370)
Q Consensus 208 L~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le 287 (370)
|+|||.+++.-........ ..+. .-+.+++|.++++++++++| |+|.+.+
T Consensus 187 LkpgG~iii~e~~~~~~~~----------------------------~~d~-~d~~~~rs~~~~~~l~~~aG-f~ii~~~ 236 (254)
T d1xtpa_ 187 LTPNGYIFFKENCSTGDRF----------------------------LVDK-EDSSLTRSDIHYKRLFNESG-VRVVKEA 236 (254)
T ss_dssp EEEEEEEEEEEEBC--CCE----------------------------EEET-TTTEEEBCHHHHHHHHHHHT-CCEEEEE
T ss_pred cCCCcEEEEEecCCCCCcc----------------------------eecc-cCCceeCCHHHHHHHHHHcC-CEEEEEE
Confidence 9999999986543222110 0111 13456789999999999999 8886655
Q ss_pred E
Q 017514 288 V 288 (370)
Q Consensus 288 ~ 288 (370)
.
T Consensus 237 ~ 237 (254)
T d1xtpa_ 237 F 237 (254)
T ss_dssp E
T ss_pred e
Confidence 3
|
| >d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein BH2331 species: Bacillus halodurans [TaxId: 86665]
Probab=99.01 E-value=2.9e-09 Score=94.37 Aligned_cols=154 Identities=13% Similarity=0.165 Sum_probs=96.9
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHH---HhhCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILR---KQLGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~---~~~~~~~~~ 126 (370)
+..+|+|+|||+|..|..+. ++ + -+|+.-|+- +.....-+ +..+..
T Consensus 15 ~~~rVLDiGcG~G~~~~~l~--------~~----~-----~~v~gvD~s-----------~~~i~~A~~~~~~~~~~--- 63 (231)
T d1vl5a_ 15 GNEEVLDVATGGGHVANAFA--------PF----V-----KKVVAFDLT-----------EDILKVARAFIEGNGHQ--- 63 (231)
T ss_dssp SCCEEEEETCTTCHHHHHHG--------GG----S-----SEEEEEESC-----------HHHHHHHHHHHHHTTCC---
T ss_pred CcCEEEEecccCcHHHHHHH--------Hh----C-----CEEEEEECC-----------HHHHhhhhhcccccccc---
Confidence 45799999999999887654 22 2 356677764 22211111 111211
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
+-.|..+ +..+==+|++|+|+++|..++||+.+ | ..+|+.-++
T Consensus 64 -~i~~~~~---d~~~l~~~~~~fD~v~~~~~l~~~~d-~--------------------------------~~~l~~~~r 106 (231)
T d1vl5a_ 64 -QVEYVQG---DAEQMPFTDERFHIVTCRIAAHHFPN-P--------------------------------ASFVSEAYR 106 (231)
T ss_dssp -SEEEEEC---CC-CCCSCTTCEEEEEEESCGGGCSC-H--------------------------------HHHHHHHHH
T ss_pred -ccccccc---ccccccccccccccccccccccccCC-H--------------------------------HHHHHHHHH
Confidence 2245554 66443368999999999999999644 2 226777789
Q ss_pred hhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEE
Q 017514 207 ELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHL 286 (370)
Q Consensus 207 EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~l 286 (370)
-|+|||++++......+. ..++.+.+.+... .+... ....+.+++.+.+++.| |+++++
T Consensus 107 ~LkpgG~l~i~~~~~~~~--------~~~~~~~~~~~~~----------~~~~~--~~~~~~~~~~~~l~~aG-f~~~~~ 165 (231)
T d1vl5a_ 107 VLKKGGQLLLVDNSAPEN--------DAFDVFYNYVEKE----------RDYSH--HRAWKKSDWLKMLEEAG-FELEEL 165 (231)
T ss_dssp HEEEEEEEEEEEEEBCSS--------HHHHHHHHHHHHH----------HCTTC--CCCCBHHHHHHHHHHHT-CEEEEE
T ss_pred hcCCCcEEEEEeCCCCCC--------HHHHHHHHHHHhh----------cccCc--ccCCCHHHHHHHHHHCC-CEEEEE
Confidence 999999999987655432 2334443333222 11111 23457899999999999 999888
Q ss_pred EEEeec
Q 017514 287 EVSEVN 292 (370)
Q Consensus 287 e~~~~~ 292 (370)
+.+..+
T Consensus 166 ~~~~~~ 171 (231)
T d1vl5a_ 166 HCFHKT 171 (231)
T ss_dssp EEEEEE
T ss_pred EEeecC
Confidence 776543
|
| >d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Carminomycin 4-O-methyltransferase species: Streptomyces peucetius [TaxId: 1950]
Probab=98.99 E-value=6.8e-09 Score=94.48 Aligned_cols=162 Identities=17% Similarity=0.231 Sum_probs=99.6
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (370)
.+.-+|+|+|||+|..++.+. +++ |.++++.-|+|. . +......... .+.. .
T Consensus 79 ~~~~~VLDvGcG~G~~~~~la--------~~~-------p~~~~~~~D~~~----~----~~~a~~~~~~-~~~~----~ 130 (253)
T d1tw3a2 79 TNVRHVLDVGGGKGGFAAAIA--------RRA-------PHVSATVLEMAG----T----VDTARSYLKD-EGLS----D 130 (253)
T ss_dssp TTCSEEEEETCTTSHHHHHHH--------HHC-------TTCEEEEEECTT----H----HHHHHHHHHH-TTCT----T
T ss_pred ccCCEEEEeCCCCCHHHHHHH--------Hhc-------ceeEEEEccCHH----H----HHHHHHHHHH-hhcc----c
Confidence 456799999999999988776 442 678888889872 1 1111111111 1211 1
Q ss_pred ceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
++ .-++|+|++.. | .+.|++++++.||.++. ++...+|+.-++-|
T Consensus 131 rv--~~~~~D~~~~~-~-~~~D~v~~~~vlh~~~d-------------------------------~~~~~~L~~~~~~L 175 (253)
T d1tw3a2 131 RV--DVVEGDFFEPL-P-RKADAIILSFVLLNWPD-------------------------------HDAVRILTRCAEAL 175 (253)
T ss_dssp TE--EEEECCTTSCC-S-SCEEEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHTE
T ss_pred ch--hhccccchhhc-c-cchhheeeccccccCCc-------------------------------hhhHHHHHHHHHhc
Confidence 22 22456887643 3 46899999999996432 23344788888999
Q ss_pred ccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEE
Q 017514 209 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEV 288 (370)
Q Consensus 209 ~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~ 288 (370)
+|||++++.-....+...... .+..+. +.-|+.-| -..||.+|+++++++.| |++.++..
T Consensus 176 kPGG~l~i~e~~~~~~~~~~~----~~~~~d--l~~~~~~~-------------g~~rt~~e~~~ll~~AG-f~~~~v~~ 235 (253)
T d1tw3a2 176 EPGGRILIHERDDLHENSFNE----QFTELD--LRMLVFLG-------------GALRTREKWDGLAASAG-LVVEEVRQ 235 (253)
T ss_dssp EEEEEEEEEECCBCGGGCCSH----HHHHHH--HHHHHHHS-------------CCCCBHHHHHHHHHHTT-EEEEEEEE
T ss_pred CCCcEEEEEeccCCCCCcchh----HHHHhh--HHHHhhCC-------------CcCCCHHHHHHHHHHCC-CeEEEEEE
Confidence 999999987543332221111 111111 11122111 13479999999999999 99988877
Q ss_pred Eeecc
Q 017514 289 SEVNW 293 (370)
Q Consensus 289 ~~~~w 293 (370)
+..|.
T Consensus 236 ~~~p~ 240 (253)
T d1tw3a2 236 LPSPT 240 (253)
T ss_dssp EECSS
T ss_pred CCCCC
Confidence 65543
|
| >d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Histamine methyltransferase domain: Histamine methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.99 E-value=9.8e-10 Score=101.11 Aligned_cols=189 Identities=10% Similarity=0.001 Sum_probs=102.4
Q ss_pred hHhhhHHHHHHHHHhHHHHHHHHHhhcccCCCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCC
Q 017514 18 YASNSLVQEKVISIAKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDL 97 (370)
Q Consensus 18 Y~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDl 97 (370)
|-+||...+.+..-..+.+.+.+..+.. .+..++|+|+|||+|..|..++..+. .++ +...+.+..-|.
T Consensus 10 ~~~~s~~~~~~~~~~~~~l~~~l~~l~~--~~~~~~VLDiGcG~G~~~~~ll~~l~----~~~-----~~~~~~~~~vD~ 78 (280)
T d1jqea_ 10 FLNHSTEHQCMQEFMDKKLPGIIGRIGD--TKSEIKILSIGGGAGEIDLQILSKVQ----AQY-----PGVCINNEVVEP 78 (280)
T ss_dssp HHHTBSHHHHHHHHHHHTHHHHTTTTTT--TCSEEEEEEETCTTSHHHHHHHHHHH----HHS-----TTCEEEEEEECC
T ss_pred HHHhCcHHHHHHHHHHHHHHHHHHHhcc--CCCCCeEEEEcCCCCHHHHHHHHHhh----hhc-----cCCceEEEEEeC
Confidence 5556555444443333333333322221 34578999999999998887764432 221 123466777785
Q ss_pred CCCchHHHHHhhHHHHHHHHHhhCCCCCCCCceEEeecCCCc------ccccCCCCceeEEEeccccccccCCCCCccCC
Q 017514 98 PGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSF------YGRLFPRNSVHLFHSSYSLQWLSQVPDGLESN 171 (370)
Q Consensus 98 p~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~f~~~vpgSF------y~~l~p~~sv~~~~S~~alhWls~~P~~~~~n 171 (370)
- +.+....++........ ..+-.......+ ...-++++++|++++..+|||+.+ |
T Consensus 79 s-----------~~~l~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~I~~~~~l~~~~d-~------ 139 (280)
T d1jqea_ 79 S-----------AEQIAKYKELVAKISNL-ENVKFAWHKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVKD-I------ 139 (280)
T ss_dssp C-----------HHHHHHHHHHHTTCCSC-TTEEEEEECSCHHHHHHHHTTSSSCCCEEEEEEESCGGGCSC-H------
T ss_pred c-----------HHHHHHHHHHHhhcccc-ccccccchhhhhhhhcchhcccCCCCceeEEEEccceecCCC-H------
Confidence 3 22222222221110000 111111111111 123568899999999999999644 1
Q ss_pred CceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCc
Q 017514 172 KGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLI 251 (370)
Q Consensus 172 k~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i 251 (370)
..+|+.-.+-|+|||.|+++....+. ...++...-|...
T Consensus 140 --------------------------~~~l~~l~~~LkpgG~l~i~~~~~~~---------~~~~l~~~~~~~~------ 178 (280)
T d1jqea_ 140 --------------------------PATLKFFHSLLGTNAKMLIIVVSGSS---------GWDKLWKKYGSRF------ 178 (280)
T ss_dssp --------------------------HHHHHHHHHTEEEEEEEEEEEECTTS---------HHHHHHHHHGGGS------
T ss_pred --------------------------HHHHHHHHhhCCCCCEEEEEEecCcc---------hHHHHHHHHHHhc------
Confidence 12678888999999999998764321 1222222222111
Q ss_pred chhhhccCCcCcccCCHHHHHHHHHhcCceEEE
Q 017514 252 EEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTID 284 (370)
Q Consensus 252 ~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~ 284 (370)
.+... ..+.+.++++..+++.| |..+
T Consensus 179 ----~~~~~--~~~~~~~~~~~~L~~~G-~~~~ 204 (280)
T d1jqea_ 179 ----PQDDL--CQYITSDDLTQMLDNLG-LKYE 204 (280)
T ss_dssp ----CCCTT--SCCCCHHHHHHHHHHHT-CCEE
T ss_pred ----CCCcc--cccCCHHHHHHHHHHCC-CceE
Confidence 01111 23467899999999999 6543
|
| >d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical protein PH0226 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.97 E-value=9.8e-10 Score=96.60 Aligned_cols=126 Identities=18% Similarity=0.237 Sum_probs=83.7
Q ss_pred hhhHHHHHHHHHhHHHHHHHHHhhcccCCCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCC
Q 017514 20 SNSLVQEKVISIAKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPG 99 (370)
Q Consensus 20 ~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~ 99 (370)
.+...++.-+..+.+++++.+ ++.-+|+|+|||+|..|..+. +. -.+|+-.|+-
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~l--------~~~~~ILDiGcG~G~~~~~la--------~~---------~~~v~giD~S- 68 (226)
T d1ve3a1 15 INSQEYRSRIETLEPLLMKYM--------KKRGKVLDLACGVGGFSFLLE--------DY---------GFEVVGVDIS- 68 (226)
T ss_dssp TTSHHHHHHHHHHHHHHHHSC--------CSCCEEEEETCTTSHHHHHHH--------HT---------TCEEEEEESC-
T ss_pred hhHHHHHHHHHHHHHHHHHhc--------CCCCEEEEECCCcchhhhhHh--------hh---------hccccccccc-
Confidence 445555666666777766643 234699999999999887554 32 2577888864
Q ss_pred CchHHHHHhhHHHHHHHHH---hhCCCCCCCCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceee
Q 017514 100 NDFNTIFRSLASFQKILRK---QLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIF 176 (370)
Q Consensus 100 NDFntLF~~l~~~~~~~~~---~~~~~~~~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~ 176 (370)
+......++ ..+. ...++.+ +.-+--+|++++|+++|+.++||+ |.
T Consensus 69 ----------~~~i~~ak~~~~~~~~-----~~~~~~~---d~~~l~~~~~~fD~I~~~~~l~~~---~~---------- 117 (226)
T d1ve3a1 69 ----------EDMIRKAREYAKSRES-----NVEFIVG---DARKLSFEDKTFDYVIFIDSIVHF---EP---------- 117 (226)
T ss_dssp ----------HHHHHHHHHHHHHTTC-----CCEEEEC---CTTSCCSCTTCEEEEEEESCGGGC---CH----------
T ss_pred ----------ccchhhhhhhhccccc-----ccccccc---ccccccccCcCceEEEEecchhhC---Ch----------
Confidence 222211111 1122 2344444 443334688999999999999996 32
Q ss_pred ecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeec
Q 017514 177 MASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLG 220 (370)
Q Consensus 177 ~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g 220 (370)
.|+..+|+.-++-|+|||+|++.+..
T Consensus 118 ------------------~d~~~~l~~i~~~LkpgG~lii~~~~ 143 (226)
T d1ve3a1 118 ------------------LELNQVFKEVRRVLKPSGKFIMYFTD 143 (226)
T ss_dssp ------------------HHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ------------------hHHHHHHHHHHHHcCcCcEEEEEEcC
Confidence 46667899999999999999998764
|
| >d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein YcgJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.96 E-value=6e-09 Score=93.19 Aligned_cols=152 Identities=14% Similarity=0.185 Sum_probs=94.0
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHH---HHHhhCCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKI---LRKQLGSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~---~~~~~~~~~~~~ 127 (370)
--||+|+|||+|..|..+. ++ + -+|+--|+- +...+. ..++.+.+
T Consensus 17 ~~rILDiGcGtG~~~~~la--------~~----~-----~~v~gvD~S-----------~~~l~~A~~~~~~~~~~---- 64 (234)
T d1xxla_ 17 EHRVLDIGAGAGHTALAFS--------PY----V-----QECIGVDAT-----------KEMVEVASSFAQEKGVE---- 64 (234)
T ss_dssp TCEEEEESCTTSHHHHHHG--------GG----S-----SEEEEEESC-----------HHHHHHHHHHHHHHTCC----
T ss_pred CCEEEEeCCcCcHHHHHHH--------Hh----C-----CeEEEEeCC-----------hhhhhhhhhhhcccccc----
Confidence 3689999999999887665 22 1 345666654 221111 11112221
Q ss_pred CceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017514 128 GQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~E 207 (370)
+..|+.+ +..+--||++++|+++|+.++||+.+ | ..+|+.-.+=
T Consensus 65 ~~~~~~~---d~~~~~~~~~~fD~v~~~~~l~~~~d-~--------------------------------~~~l~~~~r~ 108 (234)
T d1xxla_ 65 NVRFQQG---TAESLPFPDDSFDIITCRYAAHHFSD-V--------------------------------RKAVREVARV 108 (234)
T ss_dssp SEEEEEC---BTTBCCSCTTCEEEEEEESCGGGCSC-H--------------------------------HHHHHHHHHH
T ss_pred ccccccc---ccccccccccccceeeeeceeecccC-H--------------------------------HHHHHHHHHe
Confidence 2345555 55343368999999999999999544 1 1267788899
Q ss_pred hccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEE
Q 017514 208 LVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLE 287 (370)
Q Consensus 208 L~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le 287 (370)
|+|||+++++..+..+. ...+.+.+.+.... +. ......+.++++..+++.| |.+++++
T Consensus 109 LkpgG~~~~~~~~~~~~--------~~~~~~~~~~~~~~----------~~--~~~~~~~~~~~~~~~~~~g-f~~~~~~ 167 (234)
T d1xxla_ 109 LKQDGRFLLVDHYAPED--------PVLDEFVNHLNRLR----------DP--SHVRESSLSEWQAMFSANQ-LAYQDIQ 167 (234)
T ss_dssp EEEEEEEEEEEECBCSS--------HHHHHHHHHHHHHH----------CT--TCCCCCBHHHHHHHHHHTT-EEEEEEE
T ss_pred eCCCcEEEEEEcCCCCC--------HHHHHHHHHHHhhC----------CC--cccccCCHHHHHHHHHHCC-CceeEEE
Confidence 99999999987665432 12222222222111 11 1223347899999999999 9998887
Q ss_pred EEee
Q 017514 288 VSEV 291 (370)
Q Consensus 288 ~~~~ 291 (370)
.+..
T Consensus 168 ~~~~ 171 (234)
T d1xxla_ 168 KWNL 171 (234)
T ss_dssp EEEE
T ss_pred EeeC
Confidence 7643
|
| >d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Putative sarcosine dimethylglycine methyltransferase species: Red algae (Galdieria sulphuraria) [TaxId: 130081]
Probab=98.93 E-value=6.9e-08 Score=88.66 Aligned_cols=149 Identities=15% Similarity=0.067 Sum_probs=90.8
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHH---HhhCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILR---KQLGSASG 125 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~---~~~~~~~~ 125 (370)
++..+|+|+|||+|..+..+. +++ ..+|+--|+. +...+... +..+...
T Consensus 66 ~~~~~vLDiGcG~G~~~~~la--------~~~--------~~~v~gvD~s-----------~~~i~~a~~~~~~~gl~~- 117 (282)
T d2o57a1 66 QRQAKGLDLGAGYGGAARFLV--------RKF--------GVSIDCLNIA-----------PVQNKRNEEYNNQAGLAD- 117 (282)
T ss_dssp CTTCEEEEETCTTSHHHHHHH--------HHH--------CCEEEEEESC-----------HHHHHHHHHHHHHHTCTT-
T ss_pred CCCCEEEEeCCCCcHHHhhhh--------ccC--------CcEEEEEecc-----------chhhhhhhcccccccccc-
Confidence 345799999999998777654 432 2567777764 32222111 1122210
Q ss_pred CCCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 126 AAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRS 205 (370)
Q Consensus 126 ~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra 205 (370)
+--|..+ ++.+-=+|++++|+++|..++||+.. ...+|+.-+
T Consensus 118 --~v~~~~~---d~~~l~~~~~sfD~V~~~~~l~h~~d---------------------------------~~~~l~~~~ 159 (282)
T d2o57a1 118 --NITVKYG---SFLEIPCEDNSYDFIWSQDAFLHSPD---------------------------------KLKVFQECA 159 (282)
T ss_dssp --TEEEEEC---CTTSCSSCTTCEEEEEEESCGGGCSC---------------------------------HHHHHHHHH
T ss_pred --ccccccc---ccccccccccccchhhccchhhhccC---------------------------------HHHHHHHHH
Confidence 2235444 77543468899999999999998532 112677778
Q ss_pred HhhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEE
Q 017514 206 EELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDH 285 (370)
Q Consensus 206 ~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~ 285 (370)
+-|+|||+|++.-......... .. +...+... ..| ...+.+++++.+++.| |+...
T Consensus 160 ~~LkpgG~l~~~~~~~~~~~~~-~~-------~~~~~~~~--------------~~~-~~~s~~~~~~~l~~~G-f~~i~ 215 (282)
T d2o57a1 160 RVLKPRGVMAITDPMKEDGIDK-SS-------IQPILDRI--------------KLH-DMGSLGLYRSLAKECG-LVTLR 215 (282)
T ss_dssp HHEEEEEEEEEEEEEECTTCCG-GG-------GHHHHHHH--------------TCS-SCCCHHHHHHHHHHTT-EEEEE
T ss_pred HhcCCCcEEEEEEeecCCCCch-hH-------HHHHHHHh--------------ccC-CCCCHHHHHHHHHHcC-CceEE
Confidence 9999999999986654433211 11 11111111 122 3468899999999999 86554
Q ss_pred EE
Q 017514 286 LE 287 (370)
Q Consensus 286 le 287 (370)
.+
T Consensus 216 ~~ 217 (282)
T d2o57a1 216 TF 217 (282)
T ss_dssp EE
T ss_pred EE
Confidence 43
|
| >d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Methoxy mycolic acid synthase 4, Mma4 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.91 E-value=3.3e-08 Score=91.74 Aligned_cols=160 Identities=14% Similarity=0.137 Sum_probs=95.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~ 126 (370)
.--+|+|+|||.|..++.+. +++ + .+|.--|+. +.-...-++ +.+...
T Consensus 52 ~g~~VLDiGCG~G~~a~~~a--------~~~-------g-~~v~gi~ls-----------~~q~~~a~~~~~~~~l~~-- 102 (280)
T d2fk8a1 52 PGMTLLDIGCGWGTTMRRAV--------ERF-------D-VNVIGLTLS-----------KNQHARCEQVLASIDTNR-- 102 (280)
T ss_dssp TTCEEEEESCTTSHHHHHHH--------HHH-------C-CEEEEEESC-----------HHHHHHHHHHHHTSCCSS--
T ss_pred CCCEEEEecCCchHHHHHHH--------HhC-------c-eeEEEecch-----------HHHHHHHHHHHHhhcccc--
Confidence 35899999999998877655 432 2 567777765 221111111 112210
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
...+... .+ . .++++.|.++|..+++.+.+ +++..||+.-++
T Consensus 103 -~~~~~~~---d~-~--~~~~~fD~i~si~~~eh~~~-------------------------------~~~~~~f~~i~~ 144 (280)
T d2fk8a1 103 -SRQVLLQ---GW-E--DFAEPVDRIVSIEAFEHFGH-------------------------------ENYDDFFKRCFN 144 (280)
T ss_dssp -CEEEEES---CG-G--GCCCCCSEEEEESCGGGTCG-------------------------------GGHHHHHHHHHH
T ss_pred -chhhhhh---hh-h--hhccchhhhhHhhHHHHhhh-------------------------------hhHHHHHHHHHh
Confidence 1222222 32 1 34689999999999987432 356668999999
Q ss_pred hhccCceEEEEeeccCCCCCC-CchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCc-ccCCHHHHHHHHHhcCceEEE
Q 017514 207 ELVAEGRMVLTFLGRKSQDPS-SKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQ-YTPSPAEIKSEVIKEGSFTID 284 (370)
Q Consensus 207 EL~~GG~lvl~~~g~~~~~~~-~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~-y~~s~eE~~~~ie~~GsF~i~ 284 (370)
-|+|||++++...+..+.... .......++ ..-+.+. +..+.+|- +.||.+|+...+++.| |+|.
T Consensus 145 ~LkpgG~~~i~~i~~~~~~~~~~~~~~~~~~--~~~~~df----------I~kyifPgg~lPS~~~l~~~~e~aG-f~v~ 211 (280)
T d2fk8a1 145 IMPADGRMTVQSSVSYHPYEMAARGKKLSFE--TARFIKF----------IVTEIFPGGRLPSTEMMVEHGEKAG-FTVP 211 (280)
T ss_dssp HSCTTCEEEEEEEECCCHHHHHTTCHHHHHH--HHHHHHH----------HHHHTSTTCCCCCHHHHHHHHHHTT-CBCC
T ss_pred ccCCCceEEEEEeeccCcchhhhcccccccc--cccccch----------hhhhccCCCcccchHhhhhhHHhhc-cccc
Confidence 999999999988765432100 000000000 1111111 23356775 6799999999999998 8776
Q ss_pred EEEEE
Q 017514 285 HLEVS 289 (370)
Q Consensus 285 ~le~~ 289 (370)
..+.+
T Consensus 212 ~~~~~ 216 (280)
T d2fk8a1 212 EPLSL 216 (280)
T ss_dssp CCEEC
T ss_pred eeeec
Confidence 65543
|
| >d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arylamine N-methyltransferase domain: Phenylethanolamine N-methyltransferase, PNMTase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.90 E-value=4.3e-09 Score=96.56 Aligned_cols=98 Identities=14% Similarity=0.127 Sum_probs=73.3
Q ss_pred CCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEE
Q 017514 136 PGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMV 215 (370)
Q Consensus 136 pgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lv 215 (370)
++.+...-++++++|++.++++|||++..+ .|+..+|+.-++=|||||.|+
T Consensus 145 ~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~-----------------------------~~~~~~l~~~~~~LkPGG~li 195 (263)
T d2g72a1 145 PQPLGAGSPAPLPADALVSAFCLEAVSPDL-----------------------------ASFQRALDHITTLLRPGGHLL 195 (263)
T ss_dssp SSTTCSSCSSCSSEEEEEEESCHHHHCSSH-----------------------------HHHHHHHHHHHTTEEEEEEEE
T ss_pred CCccccCCcCcCccCeeeeHHHHHHHccCH-----------------------------HHHHHHHHHHHHHcCCCCEEE
Confidence 344544556778999999999999975522 356778999999999999999
Q ss_pred EEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEEEeec
Q 017514 216 LTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEVN 292 (370)
Q Consensus 216 l~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~~~~ 292 (370)
+...-..+.- .+..-.++.|..+.+|++.++++.| |+|.+++....+
T Consensus 196 ~~~~~~~~~~-----------------------------~~~~~~~~~~~~t~e~v~~~l~~aG-f~v~~~~~~~~~ 242 (263)
T d2g72a1 196 LIGALEESWY-----------------------------LAGEARLTVVPVSEEEVREALVRSG-YKVRDLRTYIMP 242 (263)
T ss_dssp EEEEESCCEE-----------------------------EETTEEEECCCCCHHHHHHHHHHTT-EEEEEEEEEECC
T ss_pred EecccCCccc-----------------------------ccCCcccccCCCCHHHHHHHHHHCC-CeEEEEEEeecc
Confidence 8876433210 0111234667889999999999999 999999887654
|
| >d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical Protein YjhP domain: Hypothetical Protein YjhP species: Escherichia coli [TaxId: 562]
Probab=98.89 E-value=9.5e-09 Score=92.59 Aligned_cols=148 Identities=13% Similarity=0.066 Sum_probs=94.9
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~~ 127 (370)
--+|+|+|||+|..+..+. +++ + ..|+--|+- +.....-.+ ..+...
T Consensus 34 g~~VLDiGCG~G~~~~~la--------~~~-------~-~~v~GvD~s-----------~~~~~~ar~~~~~~gl~~--- 83 (245)
T d1nkva_ 34 GTRILDLGSGSGEMLCTWA--------RDH-------G-ITGTGIDMS-----------SLFTAQAKRRAEELGVSE--- 83 (245)
T ss_dssp TCEEEEETCTTCHHHHHHH--------HHT-------C-CEEEEEESC-----------HHHHHHHHHHHHHTTCTT---
T ss_pred CCEEEEEcCCCCHHHHHHH--------Hhc-------C-CEEEEEecc-----------cchhhHHHHHHHHhhccc---
Confidence 4789999999998776544 331 3 567777874 333221111 122210
Q ss_pred CceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017514 128 GQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~E 207 (370)
+--|..+ ++ ..++|++++|+++|..++||+...+ .+|+.-.+-
T Consensus 84 ~v~~~~~---d~-~~~~~~~~fD~v~~~~~~~~~~d~~---------------------------------~~l~~~~r~ 126 (245)
T d1nkva_ 84 RVHFIHN---DA-AGYVANEKCDVAACVGATWIAGGFA---------------------------------GAEELLAQS 126 (245)
T ss_dssp TEEEEES---CC-TTCCCSSCEEEEEEESCGGGTSSSH---------------------------------HHHHHHTTS
T ss_pred cchhhhh---HH-hhccccCceeEEEEEehhhccCCHH---------------------------------HHHHHHHHH
Confidence 2256554 77 4568999999999999999975422 267788899
Q ss_pred hccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEE
Q 017514 208 LVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLE 287 (370)
Q Consensus 208 L~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le 287 (370)
|+|||++++...+.....+ . +.+...|. ...+.-+.+..++...+++.| |++...+
T Consensus 127 LkPGG~l~i~~~~~~~~~~-~-------~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~aG-~~~v~~~ 182 (245)
T d1nkva_ 127 LKPGGIMLIGEPYWRQLPA-T-------EEIAQACG---------------VSSTSDFLTLPGLVGAFDDLG-YDVVEMV 182 (245)
T ss_dssp EEEEEEEEEEEEEETTCCS-S-------HHHHHTTT---------------CSCGGGSCCHHHHHHHHHTTT-BCCCEEE
T ss_pred cCcCcEEEEEeccccCCCC-h-------HHHHHHhc---------------cCCCcccCCHHHHHHHHHHcC-CEEEEEE
Confidence 9999999999877654321 1 11222221 111223568889999999999 8776555
Q ss_pred EE
Q 017514 288 VS 289 (370)
Q Consensus 288 ~~ 289 (370)
..
T Consensus 183 ~~ 184 (245)
T d1nkva_ 183 LA 184 (245)
T ss_dssp EC
T ss_pred eC
Confidence 44
|
| >d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: AD-003 protein-like domain: Adrenal gland protein AD-003 (C9orf32) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.89 E-value=7.5e-09 Score=91.99 Aligned_cols=146 Identities=14% Similarity=0.101 Sum_probs=95.9
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCC-CCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGS-ASGAA 127 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~-~~~~~ 127 (370)
.+..+|+|+|||+|.++..++ ++ .+ -+|+.-|+- +...+.-++.... .. .
T Consensus 59 ~~~~~vLDiGcG~G~~~~~l~--------~~-------~~-~~v~~vD~s-----------~~~l~~ak~~~~~~~~--~ 109 (222)
T d2ex4a1 59 TGTSCALDCGAGIGRITKRLL--------LP-------LF-REVDMVDIT-----------EDFLVQAKTYLGEEGK--R 109 (222)
T ss_dssp CCCSEEEEETCTTTHHHHHTT--------TT-------TC-SEEEEEESC-----------HHHHHHHHHHTGGGGG--G
T ss_pred CCCCEEEEeccCCCHhhHHHH--------Hh-------cC-CEEEEeecC-----------HHHhhccccccccccc--c
Confidence 356799999999999887654 21 12 367777875 3332222222111 00 0
Q ss_pred CceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017514 128 GQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~E 207 (370)
..-|.. +++.+--++++++|++++..++|++.. .|+..+|+.-++-
T Consensus 110 ~~~f~~---~d~~~~~~~~~~fD~I~~~~~l~h~~~-------------------------------~~~~~~l~~i~~~ 155 (222)
T d2ex4a1 110 VRNYFC---CGLQDFTPEPDSYDVIWIQWVIGHLTD-------------------------------QHLAEFLRRCKGS 155 (222)
T ss_dssp EEEEEE---CCGGGCCCCSSCEEEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHH
T ss_pred cccccc---ccccccccccccccccccccccccchh-------------------------------hhhhhHHHHHHHh
Confidence 113444 488776678899999999999999643 2345578888999
Q ss_pred hccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEE
Q 017514 208 LVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLE 287 (370)
Q Consensus 208 L~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le 287 (370)
|+|||.+++......+... ++ ..-..+.++.++++++++++| |++.+.+
T Consensus 156 Lk~~G~~~i~~~~~~~~~~-----------------------------~~-~~~~~~~~~~~~~~~l~~~aG-f~ii~~~ 204 (222)
T d2ex4a1 156 LRPNGIIVIKDNMAQEGVI-----------------------------LD-DVDSSVCRDLDVVRRIICSAG-LSLLAEE 204 (222)
T ss_dssp EEEEEEEEEEEEEBSSSEE-----------------------------EE-TTTTEEEEBHHHHHHHHHHTT-CCEEEEE
T ss_pred cCCcceEEEEEcccccccc-----------------------------cc-cCCceeeCCHHHHHHHHHHcC-CEEEEEE
Confidence 9999999998654332210 01 112446789999999999999 9887766
Q ss_pred E
Q 017514 288 V 288 (370)
Q Consensus 288 ~ 288 (370)
.
T Consensus 205 ~ 205 (222)
T d2ex4a1 205 R 205 (222)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Aclacinomycin-10-hydroxylase RdmB species: Streptomyces purpurascens [TaxId: 1924]
Probab=98.82 E-value=4.5e-08 Score=89.39 Aligned_cols=159 Identities=18% Similarity=0.216 Sum_probs=95.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (370)
++.-+|+|+|||+|..+..+. +++ |.++++.-|+|. .++....... ..+... +
T Consensus 80 ~~~~~vlDvG~G~G~~~~~l~--------~~~-------P~~~~~~~Dlp~--------~~~~a~~~~~-~~~~~~---r 132 (256)
T d1qzza2 80 SAVRHVLDVGGGNGGMLAAIA--------LRA-------PHLRGTLVELAG--------PAERARRRFA-DAGLAD---R 132 (256)
T ss_dssp TTCCEEEEETCTTSHHHHHHH--------HHC-------TTCEEEEEECHH--------HHHHHHHHHH-HTTCTT---T
T ss_pred ccCCEEEEECCCCCHHHHHHH--------Hhh-------cCcEEEEecChH--------HHHHHHHHHh-hcCCcc---e
Confidence 455689999999998877666 443 678888899971 1111111111 222210 2
Q ss_pred ceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
-.| ++++|+..+ | .+.|+++..+.||=+ |+ ++...+|+.-++-|
T Consensus 133 i~~---~~~d~~~~~-p-~~~D~v~~~~vLh~~---~d----------------------------~~~~~lL~~i~~~L 176 (256)
T d1qzza2 133 VTV---AEGDFFKPL-P-VTADVVLLSFVLLNW---SD----------------------------EDALTILRGCVRAL 176 (256)
T ss_dssp EEE---EECCTTSCC-S-CCEEEEEEESCGGGS---CH----------------------------HHHHHHHHHHHHHE
T ss_pred eee---eeeeccccc-c-ccchhhhcccccccc---Cc----------------------------HHHHHHHHHHHhhc
Confidence 233 456888753 4 458999999999832 32 23445788889999
Q ss_pred ccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEE
Q 017514 209 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEV 288 (370)
Q Consensus 209 ~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~ 288 (370)
+|||++++.=.-..+.+... ..+..+-+ +.-|+. .+-..+|.+|+++++++.| |++.+...
T Consensus 177 kpgG~llI~d~~~~~~~~~~----~~~~~~~d-~~ml~~-------------~~g~~rt~~e~~~ll~~AG-f~~~~~~~ 237 (256)
T d1qzza2 177 EPGGRLLVLDRADVEGDGAD----RFFSTLLD-LRMLTF-------------MGGRVRTRDEVVDLAGSAG-LALASERT 237 (256)
T ss_dssp EEEEEEEEEECCH-----------HHHHHHHH-HHHHHH-------------HSCCCCCHHHHHHHHHTTT-EEEEEEEE
T ss_pred CCcceeEEEEeccCCCCccc----HHHHHHHH-HHHHhh-------------CCCccCCHHHHHHHHHHCC-CceeEEEE
Confidence 99999998754322221111 11111111 111111 1124579999999999999 99887765
Q ss_pred E
Q 017514 289 S 289 (370)
Q Consensus 289 ~ 289 (370)
.
T Consensus 238 ~ 238 (256)
T d1qzza2 238 S 238 (256)
T ss_dssp E
T ss_pred e
Confidence 5
|
| >d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Possible histamine N-methyltransferase TM1293 species: Thermotoga maritima [TaxId: 2336]
Probab=98.76 E-value=6.2e-08 Score=84.49 Aligned_cols=96 Identities=15% Similarity=0.090 Sum_probs=63.5
Q ss_pred CcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEE
Q 017514 138 SFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLT 217 (370)
Q Consensus 138 SFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~ 217 (370)
++-.--+|++++|+++|+.+|||+.+ | ..+|+.-++-|+|||+|++.
T Consensus 81 d~~~l~~~~~~fD~I~~~~~l~h~~d-~--------------------------------~~~l~~~~~~L~pgG~l~i~ 127 (208)
T d1vlma_ 81 TAENLPLKDESFDFALMVTTICFVDD-P--------------------------------ERALKEAYRILKKGGYLIVG 127 (208)
T ss_dssp BTTBCCSCTTCEEEEEEESCGGGSSC-H--------------------------------HHHHHHHHHHEEEEEEEEEE
T ss_pred cccccccccccccccccccccccccc-c--------------------------------ccchhhhhhcCCCCceEEEE
Confidence 55333468899999999999999743 2 12677778889999999999
Q ss_pred eeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEEE
Q 017514 218 FLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEV 288 (370)
Q Consensus 218 ~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~ 288 (370)
.+...+. ....... .. ....+.--.+++|.+|+...+++.| |++.++..
T Consensus 128 ~~~~~~~---------~~~~~~~--------~~----~~~~~~~~~~~~s~~~l~~~l~~~G-f~~i~v~~ 176 (208)
T d1vlma_ 128 IVDRESF---------LGREYEK--------NK----EKSVFYKNARFFSTEELMDLMRKAG-FEEFKVVQ 176 (208)
T ss_dssp EECSSSH---------HHHHHHH--------TT----TC-CCSTTCCCCCHHHHHHHHHHTT-CEEEEEEE
T ss_pred ecCCcch---------hHHhhhh--------cc----ccccccccccCCCHHHHHHHHHHcC-CeEEEEEE
Confidence 8754321 1111110 00 0112222345689999999999999 98765553
|
| >d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA2 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.76 E-value=1.5e-06 Score=80.74 Aligned_cols=166 Identities=13% Similarity=0.115 Sum_probs=96.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHH---HHHhhCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKI---LRKQLGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~---~~~~~~~~~~~ 126 (370)
.--+|+|+|||.|..++.+. +++ + .+|.--|+. +.-... .....+...
T Consensus 61 ~G~~VLDiGCG~G~~~~~~a--------~~~-------g-~~v~git~s-----------~~q~~~a~~~~~~~~l~~-- 111 (291)
T d1kpia_ 61 PGMTLLDIGCGWGSTMRHAV--------AEY-------D-VNVIGLTLS-----------ENQYAHDKAMFDEVDSPR-- 111 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HHH-------C-CEEEEEESC-----------HHHHHHHHHHHHHSCCSS--
T ss_pred CCCEEEEecCcchHHHHHHH--------Hhc-------C-cceeeccch-----------HHHHHHHHHHHHhhccch--
Confidence 35799999999998877655 432 2 455555554 211111 111122210
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
.-.+..+ ++ -+|++++|.++|--++..+....... -.+.+..||+.-++
T Consensus 112 -~v~~~~~---d~---~~~~~~fD~i~sie~~eH~~~~~~~~------------------------~~~~~~~~f~~i~~ 160 (291)
T d1kpia_ 112 -RKEVRIQ---GW---EEFDEPVDRIVSLGAFEHFADGAGDA------------------------GFERYDTFFKKFYN 160 (291)
T ss_dssp -CEEEEEC---CG---GGCCCCCSEEEEESCGGGTTCCSSCC------------------------STTHHHHHHHHHHH
T ss_pred -hhhhhhh---cc---cccccccceEeechhHHhcchhhhhh------------------------HHHHHHHHHHHHHH
Confidence 2233333 33 26789999999999996543311110 01345669999999
Q ss_pred hhccCceEEEEeeccCCCCCCCchhh--hHHHHHHHHHHHHHhcCCcchhhhccCCcCc-ccCCHHHHHHHHHhcCceEE
Q 017514 207 ELVAEGRMVLTFLGRKSQDPSSKECC--YIWELLATALNNMVSEGLIEEEKVNCFNIPQ-YTPSPAEIKSEVIKEGSFTI 283 (370)
Q Consensus 207 EL~~GG~lvl~~~g~~~~~~~~~~~~--~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~-y~~s~eE~~~~ie~~GsF~i 283 (370)
=|+|||+|++...+..+... ..+.. .-.... ...+. +....+|- +.||.+|+...+++.| |+|
T Consensus 161 ~LkpgG~~~l~~i~~~~~~~-~~~~~~~~p~~~~--~~~~f----------i~kyiFpgg~lps~~~~~~~~e~~g-l~v 226 (291)
T d1kpia_ 161 LTPDDGRMLLHTITIPDKEE-AQELGLTSPMSLL--RFIKF----------ILTEIFPGGRLPRISQVDYYSSNAG-WKV 226 (291)
T ss_dssp TSCTTCEEEEEEEECCCHHH-HHHHTCCCCHHHH--HHHHH----------HHHHTCTTCCCCCHHHHHHHHHHHT-CEE
T ss_pred hCCCCCceEEEEEeccCcch-hhhccCCCchhhc--ccchH----------HHHHhcCCCCCCCHHHHHhhhcccc-ccc
Confidence 99999999999988754310 00000 000000 01111 12234554 7789999999999998 988
Q ss_pred EEEEEE
Q 017514 284 DHLEVS 289 (370)
Q Consensus 284 ~~le~~ 289 (370)
++.+.+
T Consensus 227 ~~~~~~ 232 (291)
T d1kpia_ 227 ERYHRI 232 (291)
T ss_dssp EEEEEC
T ss_pred ceeeec
Confidence 777654
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=98.70 E-value=1.1e-07 Score=80.96 Aligned_cols=156 Identities=10% Similarity=0.080 Sum_probs=97.5
Q ss_pred HHHHHHHHhhcccCCCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHH
Q 017514 34 PITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQ 113 (370)
Q Consensus 34 ~~l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~ 113 (370)
|-+.+.+..+.. ++.-||+|+|||+|.+++.+. ++ | ++|+-.|+- +...
T Consensus 7 ~~~~~~~~~l~~---~~~~rvLd~GCG~G~~a~~la--------~~----G-----~~V~gvD~S-----------~~~i 55 (201)
T d1pjza_ 7 KDLQQYWSSLNV---VPGARVLVPLCGKSQDMSWLS--------GQ----G-----YHVVGAELS-----------EAAV 55 (201)
T ss_dssp HHHHHHHHHHCC---CTTCEEEETTTCCSHHHHHHH--------HH----C-----CEEEEEEEC-----------HHHH
T ss_pred HHHHHHHHHcCC---CCCCEEEEecCcCCHHHHHHH--------Hc----C-----CceEeeccc-----------HHHH
Confidence 445555555532 345799999999999999776 33 2 777777875 3333
Q ss_pred HHHHHhhCCCC-----------CCCCceEEeecCCCcccc-cCCCCceeEEEeccccccccCCCCCccCCCceeeecCCC
Q 017514 114 KILRKQLGSAS-----------GAAGQCFFTGVPGSFYGR-LFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTS 181 (370)
Q Consensus 114 ~~~~~~~~~~~-----------~~~~~~f~~~vpgSFy~~-l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s 181 (370)
....+..+... ......|..+ ++..- ..+..++|+++|+.++|++..
T Consensus 56 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---d~~~l~~~~~~~~D~i~~~~~l~~l~~------------------ 114 (201)
T d1pjza_ 56 ERYFTERGEQPHITSQGDFKVYAAPGIEIWCG---DFFALTARDIGHCAAFYDRAAMIALPA------------------ 114 (201)
T ss_dssp HHHHHHHCSCSEEEEETTEEEEECSSSEEEEE---CCSSSTHHHHHSEEEEEEESCGGGSCH------------------
T ss_pred HHHHHHhccccchhhhhhhhhccccccceecc---cccccccccccceeEEEEEeeeEecch------------------
Confidence 33332222110 0001123333 44221 124568999999999999543
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCc
Q 017514 182 PPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNI 261 (370)
Q Consensus 182 ~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~ 261 (370)
.++..+++.-++-|+|||++++.........+ .-
T Consensus 115 -------------~~~~~~~~~i~~~LkpgG~l~l~~~~~~~~~~---------------------------------~~ 148 (201)
T d1pjza_ 115 -------------DMRERYVQHLEALMPQACSGLLITLEYDQALL---------------------------------EG 148 (201)
T ss_dssp -------------HHHHHHHHHHHHHSCSEEEEEEEEESSCSSSS---------------------------------SS
T ss_pred -------------hhhHHHHHHHHHhcCCCcEEEEEEcccccccC---------------------------------CC
Confidence 24455788889999999999988776543311 23
Q ss_pred CcccCCHHHHHHHHHhcCceEEEEEEEE
Q 017514 262 PQYTPSPAEIKSEVIKEGSFTIDHLEVS 289 (370)
Q Consensus 262 P~y~~s~eE~~~~ie~~GsF~i~~le~~ 289 (370)
|.|..+.+|+++.+. .+ |+|+.++..
T Consensus 149 p~~~~~~~el~~l~~-~~-~~i~~~~~~ 174 (201)
T d1pjza_ 149 PPFSVPQTWLHRVMS-GN-WEVTKVGGQ 174 (201)
T ss_dssp CCCCCCHHHHHHTSC-SS-EEEEEEEES
T ss_pred ccccCCHHHHHHHhC-CC-cEEEEEEEe
Confidence 667778899988775 44 887766644
|
| >d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein ECA1738 species: Erwinia carotovora [TaxId: 554]
Probab=98.68 E-value=1.3e-07 Score=83.97 Aligned_cols=152 Identities=13% Similarity=0.121 Sum_probs=90.6
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCce
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (370)
.-+|+|+|||+|..+..+. ++ | ..|+--|+- +...+..++.... .-.
T Consensus 21 ~~~VLDiGcG~G~~~~~l~--------~~----g-----~~v~giD~s-----------~~~i~~a~~~~~~-----~~~ 67 (225)
T d2p7ia1 21 PGNLLELGSFKGDFTSRLQ--------EH----F-----NDITCVEAS-----------EEAISHAQGRLKD-----GIT 67 (225)
T ss_dssp SSCEEEESCTTSHHHHHHT--------TT----C-----SCEEEEESC-----------HHHHHHHHHHSCS-----CEE
T ss_pred CCcEEEEeCCCcHHHHHHH--------Hc----C-----CeEEEEeCc-----------HHHhhhhhccccc-----ccc
Confidence 3579999999999987554 21 2 346777764 3333333333222 223
Q ss_pred EEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHH-HHHhhc
Q 017514 131 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKC-RSEELV 209 (370)
Q Consensus 131 f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~-Ra~EL~ 209 (370)
|+.+ ++ +.+.+++++|++++...|||+.. |. .+|+. +.+=|+
T Consensus 68 ~~~~---~~-~~~~~~~~fD~I~~~~vleh~~d-~~--------------------------------~~l~~i~~~~Lk 110 (225)
T d2p7ia1 68 YIHS---RF-EDAQLPRRYDNIVLTHVLEHIDD-PV--------------------------------ALLKRINDDWLA 110 (225)
T ss_dssp EEES---CG-GGCCCSSCEEEEEEESCGGGCSS-HH--------------------------------HHHHHHHHTTEE
T ss_pred cccc---cc-cccccccccccccccceeEecCC-HH--------------------------------HHHHHHHHHhcC
Confidence 4444 55 45567899999999999999754 21 13433 335699
Q ss_pred cCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhh----ccCCcCcccCCHHHHHHHHHhcCceEEEE
Q 017514 210 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKV----NCFNIPQYTPSPAEIKSEVIKEGSFTIDH 285 (370)
Q Consensus 210 ~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~----d~f~~P~y~~s~eE~~~~ie~~GsF~i~~ 285 (370)
|||.+++.++-... ++..+ ..+. |.+..... +-..--....+.++++..+++.| |+|.+
T Consensus 111 ~gG~l~i~~pn~~~----------~~~~~-~~~~-----~~~~~~~~~~~~~~~~~h~~~~~~~~l~~~l~~~G-f~i~~ 173 (225)
T d2p7ia1 111 EGGRLFLVCPNANA----------VSRQI-AVKM-----GIISHNSAVTEAEFAHGHRCTYALDTLERDASRAG-LQVTY 173 (225)
T ss_dssp EEEEEEEEEECTTC----------HHHHH-HHHT-----TSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTT-CEEEE
T ss_pred CCceEEEEeCCccc----------HHHHH-HHHh-----hhhhhhhhcCccccceeeeeccCHHHHHHHHHHCC-CEEEE
Confidence 99999999874221 22222 1111 22221110 10111123458999999999999 99988
Q ss_pred EEEE
Q 017514 286 LEVS 289 (370)
Q Consensus 286 le~~ 289 (370)
.+.+
T Consensus 174 ~~~~ 177 (225)
T d2p7ia1 174 RSGI 177 (225)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7754
|
| >d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: rRNA methyltransferase RlmA domain: rRNA methyltransferase RlmA species: Escherichia coli [TaxId: 562]
Probab=98.60 E-value=5.9e-08 Score=89.04 Aligned_cols=101 Identities=21% Similarity=0.222 Sum_probs=67.7
Q ss_pred CCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCC
Q 017514 48 SPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAA 127 (370)
Q Consensus 48 ~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~ 127 (370)
..+..+|+|+|||+|..+..+. +. .|..+++-.|+- +.....-.+ ...
T Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~--------~~-------~~~~~~~giD~s-----------~~~~~~a~~-~~~----- 129 (268)
T d1p91a_ 82 DDKATAVLDIGCGEGYYTHAFA--------DA-------LPEITTFGLDVS-----------KVAIKAAAK-RYP----- 129 (268)
T ss_dssp CTTCCEEEEETCTTSTTHHHHH--------HT-------CTTSEEEEEESC-----------HHHHHHHHH-HCT-----
T ss_pred CCCCCEEEEeCCCCcHHHHHHH--------HH-------CCCCEEEEecch-----------Hhhhhhhhc-ccc-----
Confidence 3467899999999999987665 33 155788888874 222222122 122
Q ss_pred CceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017514 128 GQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~E 207 (370)
+-.|..| +...--+|++|+|++++..++|++.+ + ++-
T Consensus 130 ~~~~~~~---d~~~l~~~~~sfD~v~~~~~~~~~~e---------------------~-------------------~rv 166 (268)
T d1p91a_ 130 QVTFCVA---SSHRLPFSDTSMDAIIRIYAPCKAEE---------------------L-------------------ARV 166 (268)
T ss_dssp TSEEEEC---CTTSCSBCTTCEEEEEEESCCCCHHH---------------------H-------------------HHH
T ss_pred cccceee---ehhhccCCCCCEEEEeecCCHHHHHH---------------------H-------------------HHH
Confidence 2356555 66555568999999999887766311 1 355
Q ss_pred hccCceEEEEeeccCC
Q 017514 208 LVAEGRMVLTFLGRKS 223 (370)
Q Consensus 208 L~~GG~lvl~~~g~~~ 223 (370)
|||||+|+++.++.+.
T Consensus 167 LkpgG~l~~~~p~~~~ 182 (268)
T d1p91a_ 167 VKPGGWVITATPGPRH 182 (268)
T ss_dssp EEEEEEEEEEEECTTT
T ss_pred hCCCcEEEEEeeCCcc
Confidence 9999999999987543
|
| >d1fp1d2 c.66.1.12 (D:129-372) Chalcone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Chalcone O-methyltransferase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=98.58 E-value=8.9e-07 Score=80.29 Aligned_cols=151 Identities=17% Similarity=0.207 Sum_probs=95.9
Q ss_pred CCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCC
Q 017514 48 SPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAA 127 (370)
Q Consensus 48 ~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~ 127 (370)
.++.-+|+|+|||+|..++.++ +++ |+++++.-|||. - . ...+.. +
T Consensus 79 f~~~~~vlDiGGG~G~~~~~l~--------~~~-------P~l~~~v~Dlp~-----------v----i-~~~~~~---~ 124 (244)
T d1fp1d2 79 FEGISTLVDVGGGSGRNLELII--------SKY-------PLIKGINFDLPQ-----------V----I-ENAPPL---S 124 (244)
T ss_dssp TTTCSEEEEETCTTSHHHHHHH--------HHC-------TTCEEEEEECHH-----------H----H-TTCCCC---T
T ss_pred ccCCcEEEEecCCCcHHHHHHH--------HHC-------CCCeEEEecchh-----------h----h-hccCCC---C
Confidence 4567899999999999888776 553 778999999971 1 1 111111 1
Q ss_pred CceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017514 128 GQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~E 207 (370)
+-. .++|+|++.+ |.. |+++..+.||.. |+ ++-.+.|+.-++-
T Consensus 125 ri~---~~~gd~~~~~-p~~--D~~~l~~vLh~~---~d----------------------------e~~~~iL~~~~~a 167 (244)
T d1fp1d2 125 GIE---HVGGDMFASV-PQG--DAMILKAVCHNW---SD----------------------------EKCIEFLSNCHKA 167 (244)
T ss_dssp TEE---EEECCTTTCC-CCE--EEEEEESSGGGS---CH----------------------------HHHHHHHHHHHHH
T ss_pred CeE---EecCCccccc-ccc--eEEEEehhhhhC---CH----------------------------HHHHHHHHHHHHH
Confidence 223 3678999764 543 999999999963 32 2334578888999
Q ss_pred hccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEE
Q 017514 208 LVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHL 286 (370)
Q Consensus 208 L~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~l 286 (370)
|+|||++++.=.-.++....... ......+. ..+ |+. ..--.||.+|+++++++.| |+..++
T Consensus 168 L~pgg~llI~e~v~~~~~~~~~~-~~~~~~~d-~~m-~~~-------------~~g~ert~~e~~~ll~~AG-F~~v~v 229 (244)
T d1fp1d2 168 LSPNGKVIIVEFILPEEPNTSEE-SKLVSTLD-NLM-FIT-------------VGGRERTEKQYEKLSKLSG-FSKFQV 229 (244)
T ss_dssp EEEEEEEEEEEEEECSSCCSSHH-HHHHHHHH-HHH-HHH-------------HSCCCEEHHHHHHHHHHTT-CSEEEE
T ss_pred cCCCcEEEEEEEEecCCCCCchH-HHHHHHHH-HHH-Hhh-------------CCCcCCCHHHHHHHHHHcC-CCceEE
Confidence 99999999887665543221111 11111111 111 111 1223478999999999999 877554
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.57 E-value=1.3e-06 Score=77.58 Aligned_cols=160 Identities=11% Similarity=0.061 Sum_probs=100.6
Q ss_pred HHHHHHHHHhhcccCCCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHH
Q 017514 33 KPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASF 112 (370)
Q Consensus 33 ~~~l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~ 112 (370)
-|.|.+.+.++.. .+...||+|+|||.|.+++.+. ++ | .+|+--|+. +..
T Consensus 30 ~~~l~~~~~~~l~--~~~~~rvLd~GCG~G~~a~~LA--------~~----G-----~~V~gvD~S-----------~~a 79 (229)
T d2bzga1 30 HQLLKKHLDTFLK--GKSGLRVFFPLCGKAVEMKWFA--------DR----G-----HSVVGVEIS-----------ELG 79 (229)
T ss_dssp CHHHHHHHHHHHT--TCCSCEEEETTCTTCTHHHHHH--------HT----T-----CEEEEECSC-----------HHH
T ss_pred CHHHHHHHHHhcC--CCCCCEEEEeCCCCcHHHHHHH--------hC----C-----CcEEEEeCC-----------HHH
Confidence 3555555544322 2345799999999999999877 32 2 678888876 433
Q ss_pred HHHHHHhhCCCC----------------CCCCceEEeecCCCcccc-cCCCCceeEEEeccccccccCCCCCccCCCcee
Q 017514 113 QKILRKQLGSAS----------------GAAGQCFFTGVPGSFYGR-LFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNI 175 (370)
Q Consensus 113 ~~~~~~~~~~~~----------------~~~~~~f~~~vpgSFy~~-l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i 175 (370)
.+...++.+... ....--|..+ +++.- -.+.+++|++++..++|.+..
T Consensus 80 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---d~~~l~~~~~~~fd~i~~~~~l~~~~~------------ 144 (229)
T d2bzga1 80 IQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCC---SIFDLPRTNIGKFDMIWDRGALVAINP------------ 144 (229)
T ss_dssp HHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEES---CGGGGGGSCCCCEEEEEESSSTTTSCG------------
T ss_pred HHHHHHHhhccccccchhcccccceeeecCCcEEEEEc---chhhccccccCceeEEEEEEEEEeccc------------
Confidence 222222221100 0001122222 54433 357789999999999999532
Q ss_pred eecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhh
Q 017514 176 FMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEK 255 (370)
Q Consensus 176 ~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~ 255 (370)
.+...+++.-++-|+|||++++..+..+...
T Consensus 145 -------------------~~r~~~~~~~~~~LkpgG~~~l~~~~~~~~~------------------------------ 175 (229)
T d2bzga1 145 -------------------GDRKCYADTMFSLLGKKFQYLLCVLSYDPTK------------------------------ 175 (229)
T ss_dssp -------------------GGHHHHHHHHHHTEEEEEEEEEEEEECCTTT------------------------------
T ss_pred -------------------hhhHHHHHHHHhhcCCcceEEEEEcccCCCC------------------------------
Confidence 1233356677899999999999988764321
Q ss_pred hccCCcCcccCCHHHHHHHHHhcCceEEEEEEEEee
Q 017514 256 VNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLEVSEV 291 (370)
Q Consensus 256 ~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le~~~~ 291 (370)
..-|-|..+.+|++..+.. + |+|+.+|..+.
T Consensus 176 ---~~gpp~~~~~~el~~lf~~-~-~~i~~le~~~~ 206 (229)
T d2bzga1 176 ---HPGPPFYVPHAEIERLFGK-I-CNIRCLEKVDA 206 (229)
T ss_dssp ---CCCSSCCCCHHHHHHHHTT-T-EEEEEEEEEEC
T ss_pred ---CCCCCCCCCHHHHHHHhcC-C-CEEEEEEEecc
Confidence 1125577899999999964 4 99988887654
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=98.55 E-value=1e-07 Score=82.99 Aligned_cols=107 Identities=15% Similarity=0.137 Sum_probs=70.8
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhh-CCCCCCCCc
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAAGQ 129 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~-~~~~~~~~~ 129 (370)
+-+|+|+|||+|.+++.+. ++ | .+|+--|+. +...+..+... ..+. .+
T Consensus 31 ~grvLDiGcG~G~~~~~la--------~~----g-----~~v~gvD~s-----------~~~l~~a~~~~~~~~~---~~ 79 (198)
T d2i6ga1 31 PGRTLDLGCGNGRNSLYLA--------AN----G-----YDVTAWDKN-----------PASMANLERIKAAEGL---DN 79 (198)
T ss_dssp SCEEEEETCTTSHHHHHHH--------HT----T-----CEEEEEESC-----------HHHHHHHHHHHHHTTC---TT
T ss_pred CCcEEEECCCCCHHHHHHH--------HH----h-----hhhccccCc-----------HHHHHHHHHHhhhccc---cc
Confidence 3589999999999998765 32 2 567777875 33322222111 1111 12
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
+...-+++ .++.|++++|++++..++|++ |. .++..+|+.-++-|+
T Consensus 80 --~~~~~~d~-~~~~~~~~fD~I~~~~~~~~~---~~----------------------------~~~~~~l~~~~~~L~ 125 (198)
T d2i6ga1 80 --LQTDLVDL-NTLTFDGEYDFILSTVVMMFL---EA----------------------------QTIPGLIANMQRCTK 125 (198)
T ss_dssp --EEEEECCT-TTCCCCCCEEEEEEESCGGGS---CT----------------------------THHHHHHHHHHHTEE
T ss_pred --hhhhheec-ccccccccccEEEEeeeeecC---CH----------------------------HHHHHHHHHHHHHcC
Confidence 12223355 566789999999999999995 42 234458888899999
Q ss_pred cCceEEEEeeccC
Q 017514 210 AEGRMVLTFLGRK 222 (370)
Q Consensus 210 ~GG~lvl~~~g~~ 222 (370)
|||++++..+...
T Consensus 126 pgG~~~~~~~~~~ 138 (198)
T d2i6ga1 126 PGGYNLIVAAMDT 138 (198)
T ss_dssp EEEEEEEEEEBC-
T ss_pred CCcEEEEEEecCC
Confidence 9999999877543
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.52 E-value=3.7e-07 Score=81.35 Aligned_cols=118 Identities=19% Similarity=0.267 Sum_probs=76.6
Q ss_pred HHHHHHHHhhcccCCCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHH
Q 017514 34 PITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQ 113 (370)
Q Consensus 34 ~~l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~ 113 (370)
+.+++.++... .++.-+|+|+|||+|..|+.+. ++ | .+|+..|+- +.+.
T Consensus 28 ~~~~~~~~~~~---~~~~~~iLDiGcGtG~~~~~l~--------~~----~-----~~v~gvD~s-----------~~mi 76 (251)
T d1wzna1 28 DFVEEIFKEDA---KREVRRVLDLACGTGIPTLELA--------ER----G-----YEVVGLDLH-----------EEML 76 (251)
T ss_dssp HHHHHHHHHTC---SSCCCEEEEETCTTCHHHHHHH--------HT----T-----CEEEEEESC-----------HHHH
T ss_pred HHHHHHHHHhc---CCCCCEEEEeCCCCCccchhhc--------cc----c-----eEEEEEeec-----------cccc
Confidence 34444444432 2345699999999998887655 32 1 567788875 3333
Q ss_pred HHHHHhhC-CCCCCCCceEEeecCCCcccccCCCCceeEEEec-cccccccCCCCCccCCCceeeecCCCCHHHHHHHHH
Q 017514 114 KILRKQLG-SASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSS-YSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYE 191 (370)
Q Consensus 114 ~~~~~~~~-~~~~~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~-~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~ 191 (370)
+.-+++.. .+. +-.|..| ++ +.+-+++++|+++|. .++||++.
T Consensus 77 ~~a~~~~~~~~~---~i~~~~~---d~-~~l~~~~~fD~I~~~~~~~~~~~~---------------------------- 121 (251)
T d1wzna1 77 RVARRKAKERNL---KIEFLQG---DV-LEIAFKNEFDAVTMFFSTIMYFDE---------------------------- 121 (251)
T ss_dssp HHHHHHHHHTTC---CCEEEES---CG-GGCCCCSCEEEEEECSSGGGGSCH----------------------------
T ss_pred cccccccccccc---cchheeh---hh-hhcccccccchHhhhhhhhhcCCh----------------------------
Confidence 22222111 111 2345444 65 667777899999986 67888632
Q ss_pred HHHHHHHHHHHHHHHhhccCceEEEEeec
Q 017514 192 QFQRDFSLFLKCRSEELVAEGRMVLTFLG 220 (370)
Q Consensus 192 Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g 220 (370)
.|+..+|+.-++-|+|||++++.+..
T Consensus 122 ---~~~~~~L~~~~~~LkpgG~lii~~~~ 147 (251)
T d1wzna1 122 ---EDLRKLFSKVAEALKPGGVFITDFPC 147 (251)
T ss_dssp ---HHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ---HHHHHHHHHHHHHcCCCcEEEEEecc
Confidence 35566899999999999999998764
|
| >d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA1 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.49 E-value=8.8e-06 Score=75.23 Aligned_cols=100 Identities=16% Similarity=0.207 Sum_probs=62.8
Q ss_pred CCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEeeccCCCC
Q 017514 146 RNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQD 225 (370)
Q Consensus 146 ~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~~g~~~~~ 225 (370)
+++.|-++|..++..+.. +++..||+...+=|+|||+|++...+.....
T Consensus 125 ~~~fD~i~si~~~eh~~~-------------------------------~~~~~~~~~~~r~LkpgG~~~l~~i~~~~~~ 173 (285)
T d1kpga_ 125 DEPVDRIVSIGAFEHFGH-------------------------------ERYDAFFSLAHRLLPADGVMLLHTITGLHPK 173 (285)
T ss_dssp CCCCSEEEEESCGGGTCT-------------------------------TTHHHHHHHHHHHSCTTCEEEEEEEEECCHH
T ss_pred cccccceeeehhhhhcCc-------------------------------hhHHHHHHHHHhhcCCCCcEEEEEEeccCch
Confidence 578999999999887433 2344589999999999999999988754221
Q ss_pred -CCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcC-cccCCHHHHHHHHHhcCceEEEEEEEE
Q 017514 226 -PSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIP-QYTPSPAEIKSEVIKEGSFTIDHLEVS 289 (370)
Q Consensus 226 -~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P-~y~~s~eE~~~~ie~~GsF~i~~le~~ 289 (370)
........-.+ ..... +. +....+| -+.||.+++...+++.| |+|+..+.+
T Consensus 174 ~~~~~~~~~~~~-~~~~~-~f----------i~kyiFpgg~lPsl~~~~~~~e~ag-f~v~~~~~~ 226 (285)
T d1kpga_ 174 EIHERGLPMSFT-FARFL-KF----------IVTEIFPGGRLPSIPMVQECASANG-FTVTRVQSL 226 (285)
T ss_dssp HHTTTTCSCHHH-HHHHH-HH----------HHHHTSTTCCCCCHHHHHHHHHTTT-CEEEEEEEC
T ss_pred hhccccCCcchh-hhchh-hH----------HHHHhccCCCCCChhhHHHHHHHhc-hhhcccccc
Confidence 00000000011 11111 11 1222333 35689999999999999 988777544
|
| >d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical methyltransferase TM1389 species: Thermotoga maritima [TaxId: 2336]
Probab=98.38 E-value=4.3e-07 Score=80.17 Aligned_cols=99 Identities=18% Similarity=0.253 Sum_probs=66.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
+..+|+|+|||+|..+..+. +. -.+|+..|+- +...+..+ +.+. .
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~giD~s-----------~~~l~~a~-~~~~------~ 86 (246)
T d2avna1 42 NPCRVLDLGGGTGKWSLFLQ--------ER---------GFEVVLVDPS-----------KEMLEVAR-EKGV------K 86 (246)
T ss_dssp SCCEEEEETCTTCHHHHHHH--------TT---------TCEEEEEESC-----------HHHHHHHH-HHTC------S
T ss_pred CCCEEEEECCCCchhccccc--------cc---------ceEEEEeecc-----------cccccccc-cccc------c
Confidence 45689999999999987654 21 2578888875 33322222 2222 2
Q ss_pred eEEeecCCCcccccCCCCceeEEEec-cccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSS-YSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~-~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
.++.+ +..+=-+|++++|+++|. ..+||+.. | ..+|+.-.+=|
T Consensus 87 ~~~~~---~~~~l~~~~~~fD~ii~~~~~~~~~~d-~--------------------------------~~~l~~i~r~L 130 (246)
T d2avna1 87 NVVEA---KAEDLPFPSGAFEAVLALGDVLSYVEN-K--------------------------------DKAFSEIRRVL 130 (246)
T ss_dssp CEEEC---CTTSCCSCTTCEEEEEECSSHHHHCSC-H--------------------------------HHHHHHHHHHE
T ss_pred ccccc---cccccccccccccceeeecchhhhhhh-H--------------------------------HHHHHHHHhhc
Confidence 34444 553323789999999986 57899643 1 12677777899
Q ss_pred ccCceEEEEee
Q 017514 209 VAEGRMVLTFL 219 (370)
Q Consensus 209 ~~GG~lvl~~~ 219 (370)
+|||.+++.+.
T Consensus 131 k~gG~~ii~~~ 141 (246)
T d2avna1 131 VPDGLLIATVD 141 (246)
T ss_dssp EEEEEEEEEEE
T ss_pred CcCcEEEEEEC
Confidence 99999999885
|
| >d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: mRNA cap (Guanine N-7) methyltransferase domain: mRNA cap (Guanine N-7) methyltransferase species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]
Probab=98.36 E-value=1.2e-06 Score=78.84 Aligned_cols=108 Identities=17% Similarity=0.251 Sum_probs=71.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHh---hCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQ---LGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~---~~~~~~~ 126 (370)
+.-+|+|+|||+|..+..+. +. + . -+|+--|+- +...+.-... .+...
T Consensus 24 ~~~~VLDlGCG~G~~~~~~~--------~~----~---~-~~v~GiD~S-----------~~~l~~A~~r~~~~~~~~-- 74 (252)
T d1ri5a_ 24 RGDSVLDLGCGKGGDLLKYE--------RA----G---I-GEYYGVDIA-----------EVSINDARVRARNMKRRF-- 74 (252)
T ss_dssp TTCEEEEETCTTTTTHHHHH--------HH----T---C-SEEEEEESC-----------HHHHHHHHHHHHTSCCSS--
T ss_pred CcCEEEEecccCcHHHHHHH--------Hc----C---C-CeEEEecCC-----------HHHHHHHHHHHHhcCCCc--
Confidence 34789999999998876554 22 1 1 367888875 3332222111 12111
Q ss_pred CCceEEeecCCCcccccC-CCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLF-PRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRS 205 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~-p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra 205 (370)
.-.|..+ +.+..-+ +.+++|+++|..++||+-. | .+|+..+|+.-+
T Consensus 75 -~v~f~~~---D~~~~~~~~~~~fD~V~~~~~l~~~~~-~----------------------------~~~~~~~l~~i~ 121 (252)
T d1ri5a_ 75 -KVFFRAQ---DSYGRHMDLGKEFDVISSQFSFHYAFS-T----------------------------SESLDIAQRNIA 121 (252)
T ss_dssp -EEEEEES---CTTTSCCCCSSCEEEEEEESCGGGGGS-S----------------------------HHHHHHHHHHHH
T ss_pred -ceEEEEc---chhhhcccccccceEEEEcceeeecCC-C----------------------------HHHHHHHHHHHh
Confidence 1234444 4444444 6789999999999999654 1 157778999999
Q ss_pred HhhccCceEEEEee
Q 017514 206 EELVAEGRMVLTFL 219 (370)
Q Consensus 206 ~EL~~GG~lvl~~~ 219 (370)
+-|+|||+|+++++
T Consensus 122 ~~Lk~gG~~i~~~~ 135 (252)
T d1ri5a_ 122 RHLRPGGYFIMTVP 135 (252)
T ss_dssp HTEEEEEEEEEEEE
T ss_pred ceeCCCCEEEEEec
Confidence 99999999999876
|
| >d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: BC2162-like domain: Methyltransferase BC2162 species: Bacillus cereus [TaxId: 1396]
Probab=98.33 E-value=7.9e-07 Score=81.77 Aligned_cols=106 Identities=14% Similarity=0.122 Sum_probs=69.0
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhh-CCCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAA 127 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~-~~~~~~~ 127 (370)
.++.+|+|+|||+|..+..+. +.+ ++..+|+.-|+. +...+..++.. ....
T Consensus 26 ~~~~~ILDiGcG~G~~~~~la--------~~~------~~~~~v~giD~s-----------~~~l~~a~~~~~~~~~--- 77 (281)
T d2gh1a1 26 TKPVHIVDYGCGYGYLGLVLM--------PLL------PEGSKYTGIDSG-----------ETLLAEARELFRLLPY--- 77 (281)
T ss_dssp CSCCEEEEETCTTTHHHHHHT--------TTS------CTTCEEEEEECC-----------HHHHHHHHHHHHSSSS---
T ss_pred CCcCEEEEecCcCCHHHHHHH--------HhC------CCCCEEEEEecc-----------hhHhhhhhcccccccc---
Confidence 467999999999998877555 221 123577777875 33322222221 1111
Q ss_pred CceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017514 128 GQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~E 207 (370)
...|..+ ++ ..+-+++++|+++|+.++||+.. |. .+|+.-.+-
T Consensus 78 ~~~f~~~---d~-~~~~~~~~fD~v~~~~~l~~~~d-~~--------------------------------~~l~~~~~~ 120 (281)
T d2gh1a1 78 DSEFLEG---DA-TEIELNDKYDIAICHAFLLHMTT-PE--------------------------------TMLQKMIHS 120 (281)
T ss_dssp EEEEEES---CT-TTCCCSSCEEEEEEESCGGGCSS-HH--------------------------------HHHHHHHHT
T ss_pred ccccccc---cc-ccccccCCceEEEEehhhhcCCC-HH--------------------------------HHHHHHHHH
Confidence 2245444 66 34555678999999999999754 21 257777889
Q ss_pred hccCceEEEEee
Q 017514 208 LVAEGRMVLTFL 219 (370)
Q Consensus 208 L~~GG~lvl~~~ 219 (370)
|+|||.+++.-+
T Consensus 121 LkpgG~lii~~~ 132 (281)
T d2gh1a1 121 VKKGGKIICFEP 132 (281)
T ss_dssp EEEEEEEEEEEC
T ss_pred cCcCcEEEEEEC
Confidence 999999998764
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=98.33 E-value=7e-07 Score=79.80 Aligned_cols=107 Identities=14% Similarity=0.140 Sum_probs=71.1
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhh-CCCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAA 127 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~-~~~~~~~ 127 (370)
+++-+|+|+|||+|..|..+. ++ | .+|+--|+- +.+.+.-+++. ....
T Consensus 36 ~~~~~vLDiGCG~G~~~~~l~--------~~----g-----~~v~GvD~S-----------~~ml~~A~~~~~~~~~--- 84 (246)
T d1y8ca_ 36 LVFDDYLDLACGTGNLTENLC--------PK----F-----KNTWAVDLS-----------QEMLSEAENKFRSQGL--- 84 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHG--------GG----S-----SEEEEECSC-----------HHHHHHHHHHHHHTTC---
T ss_pred CCCCeEEEEeCcCCHHHHHHH--------Hh----C-----CccEeeccc-----------hhhhhhccccccccCc---
Confidence 445789999999999988665 32 2 577888875 43322222211 1111
Q ss_pred CceEEeecCCCcccccCCCCceeEEEec-cccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 128 GQCFFTGVPGSFYGRLFPRNSVHLFHSS-YSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~p~~sv~~~~S~-~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
+--|+.+ ++. .+-+++++|+++|. .+++|+.. | +|+..+|+.-++
T Consensus 85 ~v~~~~~---d~~-~~~~~~~fD~i~~~~~~~~~~~~-~-----------------------------~~~~~~l~~~~~ 130 (246)
T d1y8ca_ 85 KPRLACQ---DIS-NLNINRKFDLITCCLDSTNYIID-S-----------------------------DDLKKYFKAVSN 130 (246)
T ss_dssp CCEEECC---CGG-GCCCSCCEEEEEECTTGGGGCCS-H-----------------------------HHHHHHHHHHHT
T ss_pred cceeecc---chh-hhcccccccccceeeeeeeccCC-H-----------------------------HHHHHHHHHHHH
Confidence 2245444 663 34457899999986 67888544 1 577789999999
Q ss_pred hhccCceEEEEeec
Q 017514 207 ELVAEGRMVLTFLG 220 (370)
Q Consensus 207 EL~~GG~lvl~~~g 220 (370)
-|+|||+|++.+..
T Consensus 131 ~LkpgG~~i~~~~~ 144 (246)
T d1y8ca_ 131 HLKEGGVFIFDINS 144 (246)
T ss_dssp TEEEEEEEEEEEEC
T ss_pred hCCCCeEEEEEeCC
Confidence 99999999987653
|
| >d1kyza2 c.66.1.12 (A:120-362) Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=98.29 E-value=1e-05 Score=72.84 Aligned_cols=151 Identities=17% Similarity=0.170 Sum_probs=90.5
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (370)
++.-+|+|+|||+|..++.++ +++ |..+++.-|||.- +.. .... .
T Consensus 80 ~~~~~vvDvGGG~G~~~~~l~--------~~~-------P~l~~~v~Dlp~v--------i~~--------~~~~----~ 124 (243)
T d1kyza2 80 EGLKSLVDVGGGTGAVINTIV--------SKY-------PTIKGINFDLPHV--------IED--------APSY----P 124 (243)
T ss_dssp SSCSEEEEETCTTSHHHHHHH--------HHC-------TTSEEEEEECTTT--------TTT--------CCCC----T
T ss_pred cCCcEEEEecCCCcHHHHHHH--------HHC-------CCCeEEEcccHHh--------hhh--------cccC----C
Confidence 345689999999999988777 554 6789999999831 111 1111 1
Q ss_pred ceEEeecCCCcccccCCCCceeEEEeccccc-cccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQ-WLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~~alh-Wls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~E 207 (370)
+ +..++|+|++.+ |...+ .+-.+.|| | |. +|...+|+.-++-
T Consensus 125 r--~~~~~~d~~~~~-P~ad~--~~l~~vlh~~----~d----------------------------~~~~~iL~~~~~a 167 (243)
T d1kyza2 125 G--VEHVGGDMFVSI-PKADA--VFMKWICHDW----SD----------------------------EHCLKFLKNCYEA 167 (243)
T ss_dssp T--EEEEECCTTTCC-CCCSC--EECSSSSTTS----CH----------------------------HHHHHHHHHHHHH
T ss_pred c--eEEecccccccC-CCcce--EEEEEEeecC----CH----------------------------HHHHHHHHHHHHh
Confidence 2 334677998864 65433 33344444 4 21 3455688999999
Q ss_pred hccCceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHHHhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceEEEEEE
Q 017514 208 LVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFTIDHLE 287 (370)
Q Consensus 208 L~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~i~~le 287 (370)
|+|||++++.=.-.++....... ..... ...+.-|+. +.--..||.+|+++++++.| |+..++.
T Consensus 168 l~pgg~~li~d~~~~~~~~~~~~--~~~~~-~~d~~ml~~------------~~~g~ert~~e~~~ll~~AG-f~~vkv~ 231 (243)
T d1kyza2 168 LPDNGKVIVAECILPVAPDSSLA--TKGVV-HIDVIMLAH------------NPGGKERTQKEFEDLAKGAG-FQGFKVH 231 (243)
T ss_dssp CCSSSCEEEEECEECSSCCCCHH--HHHHH-HHHHHHHHH------------CSSCCCEEHHHHHHHHHHHC-CSCEEEE
T ss_pred cCCCceEEEEEEEecCCCCCchh--hHHHH-HHHHHHHhh------------CCCCCcCCHHHHHHHHHHcC-CCcEEEE
Confidence 99999998874433332211111 01111 111111221 11123578999999999999 8877654
|
| >d1fp2a2 c.66.1.12 (A:109-352) Isoflavone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Isoflavone O-methyltransferase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=98.20 E-value=1.3e-05 Score=72.31 Aligned_cols=147 Identities=18% Similarity=0.311 Sum_probs=93.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (370)
.+.-+|+|+|||+|..++.++ +++ |+++++.-|||. + + ...+.. .
T Consensus 79 ~~~~~vvDvGGG~G~~~~~l~--------~~~-------P~l~~~v~Dlp~-----v---i--------~~~~~~----~ 123 (244)
T d1fp2a2 79 DGLESIVDVGGGTGTTAKIIC--------ETF-------PKLKCIVFDRPQ-----V---V--------ENLSGS----N 123 (244)
T ss_dssp TTCSEEEEETCTTSHHHHHHH--------HHC-------TTCEEEEEECHH-----H---H--------TTCCCB----T
T ss_pred cCceEEEEecCCccHHHHHHH--------HhC-------CCCeEEEecCHH-----H---H--------HhCccc----C
Confidence 456789999999998877666 554 779999999971 1 1 111211 2
Q ss_pred ceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
+ +..++|+|++.. | .-|+++..+.||-.++ ++-.++|+.-++.|
T Consensus 124 r--v~~~~gD~f~~~-p--~aD~~~l~~vLHdw~d-------------------------------~~~~~iL~~~~~al 167 (244)
T d1fp2a2 124 N--LTYVGGDMFTSI-P--NADAVLLKYILHNWTD-------------------------------KDCLRILKKCKEAV 167 (244)
T ss_dssp T--EEEEECCTTTCC-C--CCSEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHHH
T ss_pred c--eEEEecCcccCC-C--CCcEEEEEeecccCCh-------------------------------HHHHHHHHHHHHHc
Confidence 2 233667999863 4 3599999999995322 23345899999999
Q ss_pred ccC---ceEEEEeeccCCCCCCCchhhhHHHHHHHHHHHH---HhcCCcchhhhccCCcCcccCCHHHHHHHHHhcCceE
Q 017514 209 VAE---GRMVLTFLGRKSQDPSSKECCYIWELLATALNNM---VSEGLIEEEKVNCFNIPQYTPSPAEIKSEVIKEGSFT 282 (370)
Q Consensus 209 ~~G---G~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~m---v~eG~i~~e~~d~f~~P~y~~s~eE~~~~ie~~GsF~ 282 (370)
+|| |++++.=.-.++... ... ..... .+.+| +-.| -.||.+|+++++++.| |+
T Consensus 168 ~pgg~~~~lli~e~~~~~~~~-~~~-~~~~~----~~~dl~m~~~~G--------------~ert~~e~~~ll~~AG-f~ 226 (244)
T d1fp2a2 168 TNDGKRGKVTIIDMVIDKKKD-ENQ-VTQIK----LLMDVNMACLNG--------------KERNEEEWKKLFIEAG-FQ 226 (244)
T ss_dssp SGGGCCCEEEEEECEECTTTS-CHH-HHHHH----HHHHHHGGGGTC--------------CCEEHHHHHHHHHHTT-CC
T ss_pred CcccCCcEEEEEEeecCCCCC-Cch-HHHHH----HHHHHHHHhCCC--------------cCCCHHHHHHHHHHcC-Cc
Confidence 999 556665433333211 111 11112 22222 2222 3679999999999999 98
Q ss_pred EEEEE
Q 017514 283 IDHLE 287 (370)
Q Consensus 283 i~~le 287 (370)
+.++.
T Consensus 227 ~~~i~ 231 (244)
T d1fp2a2 227 HYKIS 231 (244)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 87654
|
| >d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.99 E-value=1.9e-05 Score=70.55 Aligned_cols=111 Identities=14% Similarity=0.066 Sum_probs=69.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
.-.+|+|+|||+|..+..+. +.. |.-+|+.-|+- |.....+........ ..
T Consensus 74 pG~~VLDlGcGsG~~~~~la--------~~~-------~~g~V~aVDiS-----------~~~i~~a~~~a~~~~---ni 124 (230)
T d1g8sa_ 74 RDSKILYLGASAGTTPSHVA--------DIA-------DKGIVYAIEYA-----------PRIMRELLDACAERE---NI 124 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHH--------HHT-------TTSEEEEEESC-----------HHHHHHHHHHTTTCT---TE
T ss_pred CCCEEEEeCEEcCHHHHHHH--------HhC-------CCCEEEEEeCc-----------HHHHHHHHHHHhhhc---cc
Confidence 45899999999998887665 321 44688888885 544444433322211 23
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
.++.+-.... .-.++.+.++.+++..+||..+ ...+++.-.+-|+
T Consensus 125 ~~i~~d~~~~--~~~~~~~~~v~~i~~~~~~~~~---------------------------------~~~~l~~~~r~LK 169 (230)
T d1g8sa_ 125 IPILGDANKP--QEYANIVEKVDVIYEDVAQPNQ---------------------------------AEILIKNAKWFLK 169 (230)
T ss_dssp EEEECCTTCG--GGGTTTCCCEEEEEECCCSTTH---------------------------------HHHHHHHHHHHEE
T ss_pred ceEEEeeccC--cccccccceeEEeeccccchHH---------------------------------HHHHHHHHHHhcc
Confidence 4555533333 2335566677777777777322 1236777778999
Q ss_pred cCceEEEEeeccCCC
Q 017514 210 AEGRMVLTFLGRKSQ 224 (370)
Q Consensus 210 ~GG~lvl~~~g~~~~ 224 (370)
|||.+++..-.+...
T Consensus 170 pgG~~~i~~k~~~~d 184 (230)
T d1g8sa_ 170 KGGYGMIAIKARSID 184 (230)
T ss_dssp EEEEEEEEEEGGGTC
T ss_pred cCceEEEEeeccccC
Confidence 999999988766543
|
| >d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TrmB-like domain: tRNA (guanine-N(7)-)-methyltransferase TrmB species: Bacillus subtilis [TaxId: 1423]
Probab=97.97 E-value=9.6e-06 Score=71.35 Aligned_cols=110 Identities=17% Similarity=0.198 Sum_probs=68.9
Q ss_pred EEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCce-E
Q 017514 53 AIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC-F 131 (370)
Q Consensus 53 ~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~-f 131 (370)
.|+|+|||+|.+++.+. +. .|+..++--|+- -+.|-+... .. .+.+. .++ |
T Consensus 32 lvLeIGcG~G~~~~~lA--------~~-------~p~~~~iGiD~~---~~~i~~a~~----~~-~~~~l-----~Nv~~ 83 (204)
T d2fcaa1 32 IHIEVGTGKGQFISGMA--------KQ-------NPDINYIGIELF---KSVIVTAVQ----KV-KDSEA-----QNVKL 83 (204)
T ss_dssp EEEEECCTTSHHHHHHH--------HH-------CTTSEEEEECSC---HHHHHHHHH----HH-HHSCC-----SSEEE
T ss_pred eEEEEEecCcHHHHHHH--------Hh-------CCCCcEEEeecc---hHHHHHHHH----HH-HHHhc-----cCchh
Confidence 58999999999988765 43 277899999985 111111111 11 11222 343 3
Q ss_pred EeecCCCc--ccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 132 FTGVPGSF--YGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 132 ~~~vpgSF--y~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
+.| +. .-+.+|++|+|.++..+..+|..+ +. .|.++. ...||+.-++-|+
T Consensus 84 ~~~---Da~~l~~~~~~~~~d~v~i~fp~P~~k~-~h----~k~Rl~--------------------~~~~l~~~~r~Lk 135 (204)
T d2fcaa1 84 LNI---DADTLTDVFEPGEVKRVYLNFSDPWPKK-RH----EKRRLT--------------------YSHFLKKYEEVMG 135 (204)
T ss_dssp ECC---CGGGHHHHCCTTSCCEEEEESCCCCCSG-GG----GGGSTT--------------------SHHHHHHHHHHHT
T ss_pred ccc---chhhhhcccCchhhhccccccccccchh-hh----cchhhh--------------------HHHHHHHHHHhCC
Confidence 333 33 235689999999999999999432 10 111110 0137888889999
Q ss_pred cCceEEEEe
Q 017514 210 AEGRMVLTF 218 (370)
Q Consensus 210 ~GG~lvl~~ 218 (370)
|||.|++..
T Consensus 136 pgG~l~i~T 144 (204)
T d2fcaa1 136 KGGSIHFKT 144 (204)
T ss_dssp TSCEEEEEE
T ss_pred CCcEEEEEE
Confidence 999998864
|
| >d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein Ta0852 species: Thermoplasma acidophilum [TaxId: 2303]
Probab=97.90 E-value=7.8e-05 Score=67.44 Aligned_cols=102 Identities=8% Similarity=0.001 Sum_probs=60.5
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCce
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (370)
-.+|+|+|||+|..|+.+. +.. + |.-+|+--|.- +++.+..++......+..+-.
T Consensus 86 G~rVLEiG~GsG~lt~~la--------~~v---~---~~g~V~~vD~~-----------e~~~~~A~~n~~~~~~~~nv~ 140 (250)
T d1yb2a1 86 GMDILEVGVGSGNMSSYIL--------YAL---N---GKGTLTVVERD-----------EDNLKKAMDNLSEFYDIGNVR 140 (250)
T ss_dssp TCEEEEECCTTSHHHHHHH--------HHH---T---TSSEEEEECSC-----------HHHHHHHHHHHHTTSCCTTEE
T ss_pred cCEEEEeeeeCcHHHHHHH--------HHh---C---CCcEEEEEECC-----------HHHHHHHHHHHHHhcCCCceE
Confidence 4799999999999998776 322 1 44677777754 333322222111100000223
Q ss_pred EEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 017514 131 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 210 (370)
Q Consensus 131 f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~ 210 (370)
+.. +++. ..+|++++|.++.. +|+. .+ +|..=++-|+|
T Consensus 141 ~~~---~Di~-~~~~~~~fD~V~ld--------~p~p---------------~~---------------~l~~~~~~LKp 178 (250)
T d1yb2a1 141 TSR---SDIA-DFISDQMYDAVIAD--------IPDP---------------WN---------------HVQKIASMMKP 178 (250)
T ss_dssp EEC---SCTT-TCCCSCCEEEEEEC--------CSCG---------------GG---------------SHHHHHHTEEE
T ss_pred EEE---eeee-cccccceeeeeeec--------CCch---------------HH---------------HHHHHHHhcCC
Confidence 333 4764 45788999999852 3431 11 35556788999
Q ss_pred CceEEEEee
Q 017514 211 EGRMVLTFL 219 (370)
Q Consensus 211 GG~lvl~~~ 219 (370)
||++++..+
T Consensus 179 GG~lv~~~P 187 (250)
T d1yb2a1 179 GSVATFYLP 187 (250)
T ss_dssp EEEEEEEES
T ss_pred CceEEEEeC
Confidence 999987543
|
| >d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Glycine N-methyltransferase domain: Glycine N-methyltransferase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.80 E-value=1.5e-05 Score=73.04 Aligned_cols=112 Identities=15% Similarity=0.176 Sum_probs=68.2
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhh---CCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL---GSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~---~~~~~~~ 127 (370)
.-+|+|+|||+|..|+.+. ++ | .+|+--|+. +.+...-++.. +...
T Consensus 57 ~~~vLD~GcG~G~~~~~la--------~~----g-----~~v~gvD~S-----------~~ml~~A~~~~~~~~~~~--- 105 (292)
T d1xvaa_ 57 CHRVLDVACGTGVDSIMLV--------EE----G-----FSVTSVDAS-----------DKMLKYALKERWNRRKEP--- 105 (292)
T ss_dssp CCEEEESSCTTSHHHHHHH--------HT----T-----CEEEEEESC-----------HHHHHHHHHHHHHTTTSH---
T ss_pred CCEEEEecCCCcHHHHHHH--------Hc----C-----CeeeeccCc-----------hHHHHHHHHHHHhccccc---
Confidence 4689999999999988765 32 2 578888876 44322221111 1100
Q ss_pred CceEEeecCCCcc---cccCCCCceeEEEec-cccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017514 128 GQCFFTGVPGSFY---GRLFPRNSVHLFHSS-YSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKC 203 (370)
Q Consensus 128 ~~~f~~~vpgSFy---~~l~p~~sv~~~~S~-~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~ 203 (370)
...-....-.+|. ..+.+.+++|++++. .++++|...- .+ ..|...+|+.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~fd~v~~~~~~~~~~~~~~---~~-----------------------~~~~~~~l~~ 159 (292)
T d1xvaa_ 106 AFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSK---GD-----------------------QSEHRLALKN 159 (292)
T ss_dssp HHHTCEEEECCGGGHHHHSCCTTCEEEEEECSSCGGGSCCTT---SS-----------------------SHHHHHHHHH
T ss_pred ccceeeeeeccccccccccCCCCCceEEEEecCchhhcCCcc---cC-----------------------hHHHHHHHHH
Confidence 0000001112332 245567889999875 5788854411 10 1467779999
Q ss_pred HHHhhccCceEEEEee
Q 017514 204 RSEELVAEGRMVLTFL 219 (370)
Q Consensus 204 Ra~EL~~GG~lvl~~~ 219 (370)
-++-|+|||+|++.+.
T Consensus 160 ~~~~LkpgG~li~~~~ 175 (292)
T d1xvaa_ 160 IASMVRPGGLLVIDHR 175 (292)
T ss_dssp HHHTEEEEEEEEEEEE
T ss_pred HHHHcCcCcEEEEeec
Confidence 9999999999999875
|
| >d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase TrmB {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TrmB-like domain: tRNA (guanine-N(7)-)-methyltransferase TrmB species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.79 E-value=3.5e-05 Score=67.62 Aligned_cols=112 Identities=15% Similarity=0.202 Sum_probs=69.5
Q ss_pred EEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCce-E
Q 017514 53 AIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC-F 131 (370)
Q Consensus 53 ~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~-f 131 (370)
.|+|+|||+|.+++.+. +. .|+..++--|+-. +.+-+.+. .. .+.+. .++ |
T Consensus 34 lvLdIGcG~G~~~~~lA--------~~-------~p~~~~iGid~~~---~~v~~a~~----~~-~~~~l-----~Ni~~ 85 (204)
T d1yzha1 34 IHVEVGSGKGAFVSGMA--------KQ-------NPDINYIGIDIQK---SVLSYALD----KV-LEVGV-----PNIKL 85 (204)
T ss_dssp EEEEESCTTSHHHHHHH--------HH-------CTTSEEEEEESCH---HHHHHHHH----HH-HHHCC-----SSEEE
T ss_pred eEEEEeccCCHHHHHHH--------HH-------CCCCceEEEeccH---HHHHHHHH----hh-hhhcc-----cccee
Confidence 68999999999988665 33 2678899999751 11111111 11 11122 343 4
Q ss_pred EeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 017514 132 FTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAE 211 (370)
Q Consensus 132 ~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~G 211 (370)
..+-...+ .+.+|++|+|.++..+.-.| |..-- .|.++. . ..||+.-++-|+||
T Consensus 86 ~~~da~~l-~~~~~~~~~~~i~i~fPdPw----~K~~h-~krRl~-----~---------------~~~l~~~~~~Lkpg 139 (204)
T d1yzha1 86 LWVDGSDL-TDYFEDGEIDRLYLNFSDPW----PKKRH-EKRRLT-----Y---------------KTFLDTFKRILPEN 139 (204)
T ss_dssp EECCSSCG-GGTSCTTCCSEEEEESCCCC----CSGGG-GGGSTT-----S---------------HHHHHHHHHHSCTT
T ss_pred eecCHHHH-hhhccCCceehhcccccccc----cchhh-hhhhhh-----H---------------HHHHHHHHHhCCCC
Confidence 44433333 46789999999999999999 43210 011110 0 23788889999999
Q ss_pred ceEEEEe
Q 017514 212 GRMVLTF 218 (370)
Q Consensus 212 G~lvl~~ 218 (370)
|.+.+..
T Consensus 140 G~l~i~T 146 (204)
T d1yzha1 140 GEIHFKT 146 (204)
T ss_dssp CEEEEEE
T ss_pred cEEEEEE
Confidence 9998754
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=97.76 E-value=5.2e-05 Score=66.70 Aligned_cols=79 Identities=14% Similarity=0.240 Sum_probs=50.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~ 126 (370)
..-+|+|+|||+|..|..+. +.+ + +.-.|+..|.- +...+.-++ ..+..
T Consensus 75 ~g~~VLdiG~GtG~~s~~la--------~~~---~---~~g~V~~id~~-----------~~~~~~a~~~~~~~~~~--- 126 (213)
T d1dl5a1 75 KGMRVLEIGGGTGYNAAVMS--------RVV---G---EKGLVVSVEYS-----------RKICEIAKRNVERLGIE--- 126 (213)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------HHH---C---TTCEEEEEESC-----------HHHHHHHHHHHHHTTCC---
T ss_pred ccceEEEecCccchhHHHHH--------HHh---C---CCCcEEEeecc-----------hhhHHHhhhhHhhhccc---
Confidence 45799999999999998665 332 1 34667777754 222221111 12221
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEecccccc
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQW 160 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhW 160 (370)
+..++. |+..+-+++.+++|.+++..++++
T Consensus 127 -n~~~~~---~d~~~~~~~~~~fD~I~~~~~~~~ 156 (213)
T d1dl5a1 127 -NVIFVC---GDGYYGVPEFSPYDVIFVTVGVDE 156 (213)
T ss_dssp -SEEEEE---SCGGGCCGGGCCEEEEEECSBBSC
T ss_pred -cccccc---CchHHccccccchhhhhhhccHHH
Confidence 334544 366666777889999999999886
|
| >d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Arginine methyltransferase, HMT1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.57 E-value=0.00016 Score=67.20 Aligned_cols=103 Identities=20% Similarity=0.275 Sum_probs=65.5
Q ss_pred eEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCceE
Q 017514 52 VAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCF 131 (370)
Q Consensus 52 ~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~f 131 (370)
-+|+|+|||+|..|+.+. +. | . -+|+.-|.. ..-.+.+.. .+..+... .-.+
T Consensus 40 ~~VLDlGcGtG~ls~~aa--------~~----G---a-~~V~avd~s--~~~~~a~~~-------~~~~~~~~---~i~~ 91 (328)
T d1g6q1_ 40 KIVLDVGCGTGILSMFAA--------KH----G---A-KHVIGVDMS--SIIEMAKEL-------VELNGFSD---KITL 91 (328)
T ss_dssp CEEEEETCTTSHHHHHHH--------HT----C---C-SEEEEEESS--THHHHHHHH-------HHHTTCTT---TEEE
T ss_pred CEEEEeCCCCCHHHHHHH--------Hh----C---C-CEEEEEeCC--HHHHHHHHH-------HHHhCccc---cceE
Confidence 589999999999887665 32 2 1 367787863 111111111 11222210 2244
Q ss_pred EeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 017514 132 FTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAE 211 (370)
Q Consensus 132 ~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~G 211 (370)
+.+ +..+--+|++++|+++|....+.+.... ++..++.+|.+=|+||
T Consensus 92 i~~---~~~~l~~~~~~~D~i~se~~~~~~~~e~------------------------------~~~~~~~a~~r~Lkpg 138 (328)
T d1g6q1_ 92 LRG---KLEDVHLPFPKVDIIISEWMGYFLLYES------------------------------MMDTVLYARDHYLVEG 138 (328)
T ss_dssp EES---CTTTSCCSSSCEEEEEECCCBTTBSTTC------------------------------CHHHHHHHHHHHEEEE
T ss_pred EEe---ehhhccCcccceeEEEEEecceeeccch------------------------------hHHHHHHHHHhccCCC
Confidence 444 6655557899999999998888755422 3445788999999999
Q ss_pred ceEE
Q 017514 212 GRMV 215 (370)
Q Consensus 212 G~lv 215 (370)
|+++
T Consensus 139 G~ii 142 (328)
T d1g6q1_ 139 GLIF 142 (328)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 9985
|
| >d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.55 E-value=0.00026 Score=61.90 Aligned_cols=25 Identities=16% Similarity=0.155 Sum_probs=20.1
Q ss_pred HHHHHHHHhhccCceEEEEeeccCC
Q 017514 199 LFLKCRSEELVAEGRMVLTFLGRKS 223 (370)
Q Consensus 199 ~fL~~Ra~EL~~GG~lvl~~~g~~~ 223 (370)
.||+.-.+=|+|||++++..-++..
T Consensus 141 ~~l~~~~~~LkpgG~l~i~~~~~~~ 165 (209)
T d1nt2a_ 141 ILKANAEFFLKEKGEVVIMVKARSI 165 (209)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEHHHH
T ss_pred HHHHHHHHHhccCCeEEEEEEcccc
Confidence 3777778899999999998876543
|
| >d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.45 E-value=0.00025 Score=62.72 Aligned_cols=86 Identities=15% Similarity=0.058 Sum_probs=48.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCC-CCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSA-SGAAG 128 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~-~~~~~ 128 (370)
+--+|+|+|||+|..|..+. +.+ + |.-+|+--|.- ..+...... .+.+ .+.. .....
T Consensus 76 ~g~~VLdiG~GsGy~ta~la--------~l~---~---~~g~V~~ie~~----~~l~~~a~~---~l~~-~~~~~~~~~~ 133 (224)
T d1i1na_ 76 EGAKALDVGSGSGILTACFA--------RMV---G---CTGKVIGIDHI----KELVDDSVN---NVRK-DDPTLLSSGR 133 (224)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HHH---C---TTCEEEEEESC----HHHHHHHHH---HHHH-HCTHHHHTSS
T ss_pred CCCeEEEecCCCCHHHHHHH--------HHh---C---CCceEEEEcCC----HHHHHHHHH---hccc-cCcccccccc
Confidence 34799999999999988665 332 1 34667776764 111111111 1111 0100 00001
Q ss_pred ceEEeecCCCcccccCCCCceeEEEecccccc
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQW 160 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhW 160 (370)
..+.. |+-+.-.++.+++|.+++..++++
T Consensus 134 ~~~~~---gD~~~~~~~~~~fD~I~~~~~~~~ 162 (224)
T d1i1na_ 134 VQLVV---GDGRMGYAEEAPYDAIHVGAAAPV 162 (224)
T ss_dssp EEEEE---SCGGGCCGGGCCEEEEEECSBBSS
T ss_pred eEEEE---eecccccchhhhhhhhhhhcchhh
Confidence 23333 466666778889999999999876
|
| >d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.42 E-value=0.0012 Score=58.53 Aligned_cols=112 Identities=14% Similarity=0.099 Sum_probs=67.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
.-.+|+|+|||+|..|..+. +.. | |.-.||.-|.- +..-....+...... ..
T Consensus 73 pG~~VLDlGaGsG~~t~~la--------~~V---G---~~G~V~aVD~s-----------~~~l~~a~~~a~~~~---~~ 124 (227)
T d1g8aa_ 73 PGKSVLYLGIASGTTASHVS--------DIV---G---WEGKIFGIEFS-----------PRVLRELVPIVEERR---NI 124 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHH--------HHH---C---TTSEEEEEESC-----------HHHHHHHHHHHSSCT---TE
T ss_pred CCCEEEEeccCCCHHHHHHH--------HHh---C---CCCEEEEEeCc-----------HHHHHHHHHHHHhcC---Cc
Confidence 34899999999999988666 321 3 45788888875 444333333222210 22
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
..+.+-.+.-..--.+..++|+++...+. |+ +-..+++.-.+-|+
T Consensus 125 ~~i~~d~~~~~~~~~~~~~vD~i~~d~~~------~~-----------------------------~~~~~l~~~~~~Lk 169 (227)
T d1g8aa_ 125 VPILGDATKPEEYRALVPKVDVIFEDVAQ------PT-----------------------------QAKILIDNAEVYLK 169 (227)
T ss_dssp EEEECCTTCGGGGTTTCCCEEEEEECCCS------TT-----------------------------HHHHHHHHHHHHEE
T ss_pred eEEEEECCCcccccccccceEEEEEEccc------cc-----------------------------hHHHHHHHHHHhcc
Confidence 44444444333323445689988764221 11 11236777788999
Q ss_pred cCceEEEEeeccCCC
Q 017514 210 AEGRMVLTFLGRKSQ 224 (370)
Q Consensus 210 ~GG~lvl~~~g~~~~ 224 (370)
|||++++...++...
T Consensus 170 pgG~lvi~~ka~~~~ 184 (227)
T d1g8aa_ 170 RGGYGMIAVKSRSID 184 (227)
T ss_dssp EEEEEEEEEEGGGTC
T ss_pred cCCeEEEEEECCccC
Confidence 999999988766543
|
| >d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein MJ0882 domain: Hypothetical protein MJ0882 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.39 E-value=0.00019 Score=61.59 Aligned_cols=104 Identities=13% Similarity=0.130 Sum_probs=61.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~ 126 (370)
+.-+|+|+|||+|..++.+. +.+ + +|+..|+- +......++ ..+...
T Consensus 52 ~~~~VLDiGcG~G~~~~~la--------~~~-------~--~v~~iD~s-----------~~~i~~a~~n~~~~~l~~-- 101 (194)
T d1dusa_ 52 KDDDILDLGCGYGVIGIALA--------DEV-------K--STTMADIN-----------RRAIKLAKENIKLNNLDN-- 101 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHG--------GGS-------S--EEEEEESC-----------HHHHHHHHHHHHHTTCTT--
T ss_pred CCCeEEEEeecCChhHHHHH--------hhc-------c--ccceeeec-----------cccchhHHHHHHHhCCcc--
Confidence 45799999999998887544 221 2 46666763 221111111 112110
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
.++ ..+-++.++ -++++++|+++|...+|+..+ .+..||+.=.+
T Consensus 102 -~~i--~~~~~d~~~-~~~~~~fD~Ii~~~p~~~~~~--------------------------------~~~~~l~~~~~ 145 (194)
T d1dusa_ 102 -YDI--RVVHSDLYE-NVKDRKYNKIITNPPIRAGKE--------------------------------VLHRIIEEGKE 145 (194)
T ss_dssp -SCE--EEEECSTTT-TCTTSCEEEEEECCCSTTCHH--------------------------------HHHHHHHHHHH
T ss_pred -ceE--EEEEcchhh-hhccCCceEEEEcccEEecch--------------------------------hhhhHHHHHHH
Confidence 122 223347766 567899999999876665211 12346666677
Q ss_pred hhccCceEEEEee
Q 017514 207 ELVAEGRMVLTFL 219 (370)
Q Consensus 207 EL~~GG~lvl~~~ 219 (370)
-|+|||+|++...
T Consensus 146 ~LkpgG~l~i~~~ 158 (194)
T d1dusa_ 146 LLKDNGEIWVVIQ 158 (194)
T ss_dssp HEEEEEEEEEEEE
T ss_pred hcCcCcEEEEEEe
Confidence 8999999988653
|
| >d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 1, PRMT1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.38 E-value=0.00019 Score=66.51 Aligned_cols=103 Identities=17% Similarity=0.133 Sum_probs=65.3
Q ss_pred eEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCceE
Q 017514 52 VAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCF 131 (370)
Q Consensus 52 ~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~f 131 (370)
-+|+|+|||+|..|+.+. +. | + -+|+.-|... .- ...+.. .+..+..- +-.+
T Consensus 35 ~~VLDiGcG~G~ls~~aa--------~~----G---a-~~V~avd~s~-~~-~~a~~~-------~~~n~~~~---~v~~ 86 (316)
T d1oria_ 35 KVVLDVGSGTGILCMFAA--------KA----G---A-RKVIGIECSS-IS-DYAVKI-------VKANKLDH---VVTI 86 (316)
T ss_dssp CEEEEETCTTSHHHHHHH--------HT----T---C-SEEEEEECST-TH-HHHHHH-------HHHTTCTT---TEEE
T ss_pred CEEEEEecCCcHHHHHHH--------Hh----C---C-CEEEEEcCcH-HH-hhhhhH-------HHHhCCcc---ccce
Confidence 579999999999887666 32 2 2 4678888541 11 111111 11112110 2234
Q ss_pred EeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 017514 132 FTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAE 211 (370)
Q Consensus 132 ~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~G 211 (370)
+. |+..+--+|.+++|+++|....|.+-.- .++..+|++|.+-|+||
T Consensus 87 ~~---~~~~~~~~~~~~~D~ivs~~~~~~l~~e------------------------------~~~~~~l~~~~r~Lkp~ 133 (316)
T d1oria_ 87 IK---GKVEEVELPVEKVDIIISEWMGYCLFYE------------------------------SMLNTVLHARDKWLAPD 133 (316)
T ss_dssp EE---SCTTTCCCSSSCEEEEEECCCBBTBTBT------------------------------CCHHHHHHHHHHHEEEE
T ss_pred Ee---ccHHHcccccceeEEEeeeeeeeeeccH------------------------------HHHHHHHHHHHhcCCCC
Confidence 33 4665555788999999998887774431 23455899999999999
Q ss_pred ceEE
Q 017514 212 GRMV 215 (370)
Q Consensus 212 G~lv 215 (370)
|+++
T Consensus 134 G~ii 137 (316)
T d1oria_ 134 GLIF 137 (316)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 9986
|
| >d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Probable methyltransferase Rv2118c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.37 E-value=0.00086 Score=60.82 Aligned_cols=105 Identities=20% Similarity=0.202 Sum_probs=64.0
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCce
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (370)
-.+|+|.|||+|..|+.+. +. .| |.-+|+--|.- -|+-...+ .......+... .+..
T Consensus 97 G~~VLE~G~GsG~lt~~La--------~~---vg---p~G~V~~~d~~-~~~~~~Ar------~n~~~~~~~~~--~nv~ 153 (264)
T d1i9ga_ 97 GARVLEAGAGSGALTLSLL--------RA---VG---PAGQVISYEQR-ADHAEHAR------RNVSGCYGQPP--DNWR 153 (264)
T ss_dssp TCEEEEECCTTSHHHHHHH--------HH---HC---TTSEEEEECSC-HHHHHHHH------HHHHHHHTSCC--TTEE
T ss_pred CCEEEecCcCCcHHHHHHH--------Hh---hC---CCcEEEEecCC-HHHHHHHH------HhhhhhccCCC--ceEE
Confidence 5799999999999999777 32 12 55677777754 11111111 01111111111 1234
Q ss_pred EEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 017514 131 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 210 (370)
Q Consensus 131 f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~ 210 (370)
|..+ ++.+.-+|++++|.++. ++|+.- + +|..-++-|+|
T Consensus 154 ~~~~---d~~~~~~~~~~fDaV~l--------dlp~P~---------------~---------------~l~~~~~~Lkp 192 (264)
T d1i9ga_ 154 LVVS---DLADSELPDGSVDRAVL--------DMLAPW---------------E---------------VLDAVSRLLVA 192 (264)
T ss_dssp EECS---CGGGCCCCTTCEEEEEE--------ESSCGG---------------G---------------GHHHHHHHEEE
T ss_pred EEec---ccccccccCCCcceEEE--------ecCCHH---------------H---------------HHHHHHhccCC
Confidence 5444 77777789999999974 356421 1 35556899999
Q ss_pred CceEEEEee
Q 017514 211 EGRMVLTFL 219 (370)
Q Consensus 211 GG~lvl~~~ 219 (370)
||++++..+
T Consensus 193 GG~lv~~~P 201 (264)
T d1i9ga_ 193 GGVLMVYVA 201 (264)
T ss_dssp EEEEEEEES
T ss_pred CCEEEEEeC
Confidence 999988764
|
| >d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 3, PRMT3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.36 E-value=0.00066 Score=62.32 Aligned_cols=136 Identities=15% Similarity=0.184 Sum_probs=75.0
Q ss_pred hhHhhhHHHHHHHHH--hHHHHHHHHHhhcccCCCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEe
Q 017514 17 SYASNSLVQEKVISI--AKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFL 94 (370)
Q Consensus 17 sY~~nS~~Q~~~~~~--~~~~l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~ 94 (370)
+|+.- .+|..++.. -.....+||.+.... -+.-+|+|+|||+|..|+.+. +. | + -+|+.
T Consensus 3 ~y~~~-~~h~~ml~D~~r~~~y~~ai~~~~~~--~~~~~VLDiGcG~G~lsl~aa--------~~----G---a-~~V~a 63 (311)
T d2fyta1 3 SYGHY-GIHEEMLKDKIRTESYRDFIYQNPHI--FKDKVVLDVGCGTGILSMFAA--------KA----G---A-KKVLG 63 (311)
T ss_dssp GGGSH-HHHHHHHTCHHHHHHHHHHHHHCGGG--TTTCEEEEETCTTSHHHHHHH--------HT----T---C-SEEEE
T ss_pred Ccccc-hHHHHHhCCHHHHHHHHHHHHhcccc--CCcCEEEEECCCCCHHHHHHH--------Hc----C---C-CEEEE
Confidence 45443 334444421 223345555432221 123589999999999887665 32 2 2 47888
Q ss_pred CCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCce
Q 017514 95 NDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGN 174 (370)
Q Consensus 95 nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~ 174 (370)
.|... -- .... .. ..+.+.. ..+.+ +.|+..+--+|++++|+++|....|.+..-
T Consensus 64 id~s~--~~--~~a~----~~-~~~~~~~----~~i~~--~~~~~~~l~~~~~~~D~Ivse~~~~~~~~e---------- 118 (311)
T d2fyta1 64 VDQSE--IL--YQAM----DI-IRLNKLE----DTITL--IKGKIEEVHLPVEKVDVIISEWMGYFLLFE---------- 118 (311)
T ss_dssp EESST--HH--HHHH----HH-HHHTTCT----TTEEE--EESCTTTSCCSCSCEEEEEECCCBTTBTTT----------
T ss_pred EeCHH--HH--HHHH----HH-HHHhCCC----ccceE--EEeeHHHhcCccccceEEEEeeeeeecccc----------
Confidence 88641 11 1111 11 1112221 22222 234554444688999999997666653321
Q ss_pred eeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEE
Q 017514 175 IFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVL 216 (370)
Q Consensus 175 i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl 216 (370)
..+..++.+|.+-|+|||+++.
T Consensus 119 --------------------~~~~~~~~a~~~~Lkp~G~iip 140 (311)
T d2fyta1 119 --------------------SMLDSVLYAKNKYLAKGGSVYP 140 (311)
T ss_dssp --------------------CHHHHHHHHHHHHEEEEEEEES
T ss_pred --------------------cccHHHHHHHHhcCCCCcEEec
Confidence 1234478889999999999973
|
| >d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ribosomal protein L11 methyltransferase PrmA domain: PrmA-like protein TTHA0656 (TT0836) species: Thermus thermophilus [TaxId: 274]
Probab=97.22 E-value=0.0004 Score=62.71 Aligned_cols=69 Identities=20% Similarity=0.269 Sum_probs=41.5
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~~ 127 (370)
.-+|+|+|||+|..++.+. +. | .+|+.-|.- +...+.-++ ..+.
T Consensus 121 g~~VLDiGcGsG~l~i~aa--------~~----g-----~~V~gvDis-----------~~av~~A~~na~~n~~----- 167 (254)
T d2nxca1 121 GDKVLDLGTGSGVLAIAAE--------KL----G-----GKALGVDID-----------PMVLPQAEANAKRNGV----- 167 (254)
T ss_dssp TCEEEEETCTTSHHHHHHH--------HT----T-----CEEEEEESC-----------GGGHHHHHHHHHHTTC-----
T ss_pred cCEEEEcccchhHHHHHHH--------hc----C-----CEEEEEECC-----------hHHHHHHHHHHHHcCC-----
Confidence 3699999999998876543 21 2 457777864 332222211 1222
Q ss_pred CceEEeecCCCcccccCCCCceeEEEecc
Q 017514 128 GQCFFTGVPGSFYGRLFPRNSVHLFHSSY 156 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~p~~sv~~~~S~~ 156 (370)
...|..+ +. ...+|.+++|+++++.
T Consensus 168 ~~~~~~~---d~-~~~~~~~~fD~V~ani 192 (254)
T d2nxca1 168 RPRFLEG---SL-EAALPFGPFDLLVANL 192 (254)
T ss_dssp CCEEEES---CH-HHHGGGCCEEEEEEEC
T ss_pred ceeEEec---cc-cccccccccchhhhcc
Confidence 2345444 44 3467889999999864
|
| >d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Guanidinoacetate methyltransferase domain: Guanidinoacetate methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.22 E-value=0.00091 Score=58.66 Aligned_cols=109 Identities=7% Similarity=-0.083 Sum_probs=58.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
.-.+|+|+|||+|..+..+. +. .+ -+|+.-|+- +...+..++...... ..
T Consensus 53 ~g~~VLdIGcG~G~~a~~~a--------~~-------~~-~~v~~id~s-----------~~~~~~a~~~~~~~~---~~ 102 (229)
T d1zx0a1 53 KGGRVLEVGFGMAIAASKVQ--------EA-------PI-DEHWIIECN-----------DGVFQRLRDWAPRQT---HK 102 (229)
T ss_dssp TCEEEEEECCTTSHHHHHHH--------TS-------CE-EEEEEEECC-----------HHHHHHHHHHGGGCS---SE
T ss_pred CCCeEEEeeccchHHHHHHH--------Hc-------CC-CeEEEeCCC-----------HHHHHHHHHHhhhcc---cc
Confidence 34799999999998776554 21 23 456777775 443333332221110 12
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL~ 209 (370)
+-..-........-+|.+++|.++.-...... .... ..|...||+.-.+=|+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~fD~i~fD~~~~~~--~~~~--------------------------~~~~~~~~~~~~r~Lk 154 (229)
T d1zx0a1 103 VIPLKGLWEDVAPTLPDGHFDGILYDTYPLSE--ETWH--------------------------THQFNFIKNHAFRLLK 154 (229)
T ss_dssp EEEEESCHHHHGGGSCTTCEEEEEECCCCCBG--GGTT--------------------------THHHHHHHHTHHHHEE
T ss_pred cccccccccccccccccccccceeeccccccc--cccc--------------------------ccCHHHHHHHHHHHcC
Confidence 22111111222334688899988732111110 0000 0345557888889999
Q ss_pred cCceEEE
Q 017514 210 AEGRMVL 216 (370)
Q Consensus 210 ~GG~lvl 216 (370)
|||+|++
T Consensus 155 pGG~~~~ 161 (229)
T d1zx0a1 155 PGGVLTY 161 (229)
T ss_dssp EEEEEEE
T ss_pred CCcEEEE
Confidence 9999876
|
| >d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.01 E-value=0.0024 Score=59.29 Aligned_cols=110 Identities=18% Similarity=0.188 Sum_probs=59.3
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHh-hHHHHHHHHHhhCCCCCCCCc
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRS-LASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~-l~~~~~~~~~~~~~~~~~~~~ 129 (370)
.-+|+|+|||+|..++.+. +.. +.-.++--|+-.+= -.+.+. +..+.... +..|... .+
T Consensus 152 ~~~vlD~GcG~G~~~~~~a--------~~~-------~~~~~~Gid~s~~~-~~~a~~~~~~~~~~~-~~~g~~~---~~ 211 (328)
T d1nw3a_ 152 DDLFVDLGSGVGQVVLQVA--------AAT-------NCKHHYGVEKADIP-AKYAETMDREFRKWM-KWYGKKH---AE 211 (328)
T ss_dssp TCEEEEETCTTSHHHHHHH--------HHC-------CCSEEEEEECSHHH-HHHHHHHHHHHHHHH-HHHTCCC---CC
T ss_pred CCEEEEcCCCCCHHHHHHH--------HHh-------CCCeEEEEeCCHHH-HHHHHHHHHHHHHHh-hhccccC---Cc
Confidence 4689999999998877555 221 22356666653221 112222 12221111 1223322 22
Q ss_pred -eEEeecCCCcccccCCCC--ceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 130 -CFFTGVPGSFYGRLFPRN--SVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 130 -~f~~~vpgSFy~~l~p~~--sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
.|..| +|.+-=+.++ ..|++++++.+|| | |+...|+...+
T Consensus 212 i~~~~g---d~~~~~~~~~~~~advi~~~~~~f~----~------------------------------~~~~~l~e~~r 254 (328)
T d1nw3a_ 212 YTLERG---DFLSEEWRERIANTSVIFVNNFAFG----P------------------------------EVDHQLKERFA 254 (328)
T ss_dssp EEEEEC---CTTSHHHHHHHHHCSEEEECCTTTC----H------------------------------HHHHHHHHHHT
T ss_pred eEEEEC---cccccccccccCcceEEEEcceecc----h------------------------------HHHHHHHHHHH
Confidence 34444 6643223332 2467777766666 2 33346777889
Q ss_pred hhccCceEEEE
Q 017514 207 ELVAEGRMVLT 217 (370)
Q Consensus 207 EL~~GG~lvl~ 217 (370)
.|||||++|+.
T Consensus 255 ~LKpGg~iv~~ 265 (328)
T d1nw3a_ 255 NMKEGGRIVSS 265 (328)
T ss_dssp TCCTTCEEEES
T ss_pred hCCCCcEEEEe
Confidence 99999999864
|
| >d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Escherichia coli [TaxId: 562]
Probab=96.98 E-value=0.0015 Score=59.55 Aligned_cols=129 Identities=17% Similarity=0.302 Sum_probs=72.2
Q ss_pred HHHHHHHhhcccCCCCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHH
Q 017514 35 ITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQK 114 (370)
Q Consensus 35 ~l~~ai~~~~~~~~~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~ 114 (370)
+++.++... ..+..+|+|+|||+|..++.+. .. .|..+|+..|.- +.-..
T Consensus 97 lv~~~l~~~----~~~~~~vlDlGtGSG~I~i~la--------~~-------~p~~~v~avDis-----------~~Al~ 146 (274)
T d2b3ta1 97 LVEQALARL----PEQPCRILDLGTGTGAIALALA--------SE-------RPDCEIIAVDRM-----------PDAVS 146 (274)
T ss_dssp HHHHHHHHS----CSSCCEEEEETCTTSHHHHHHH--------HH-------CTTSEEEEECSS-----------HHHHH
T ss_pred hhhhHhhhh----cccccceeeeehhhhHHHHHHH--------hh-------CCcceeeeccch-----------hHHHh
Confidence 445554432 2356889999999999888666 32 267899999985 22111
Q ss_pred HHH---HhhCCCCCCCCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCc----ee--e---ecCCCC
Q 017514 115 ILR---KQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKG----NI--F---MASTSP 182 (370)
Q Consensus 115 ~~~---~~~~~~~~~~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~----~i--~---~~~~s~ 182 (370)
.-+ +..+.. +--| +-++++.. +|.+++|+++|+ |+.+..+.- .+ | ..-.+.
T Consensus 147 ~A~~Na~~~~~~----~v~~---~~~d~~~~-~~~~~fDlIvsN---------PPYi~~~~~~~~~~v~~~eP~~AL~~g 209 (274)
T d2b3ta1 147 LAQRNAQHLAIK----NIHI---LQSDWFSA-LAGQQFAMIVSN---------PPYIDEQDPHLQQGDVRFEPLTALVAA 209 (274)
T ss_dssp HHHHHHHHHTCC----SEEE---ECCSTTGG-GTTCCEEEEEEC---------CCCBCTTCHHHHSSGGGSSCSTTTBCH
T ss_pred HHHHHHHHhCcc----ccee---eecccccc-cCCCceeEEEec---------chhhhhhhhcccccccccchhhhcccc
Confidence 111 111221 2133 44588775 467799999997 433322100 00 0 000011
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEEe
Q 017514 183 PCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTF 218 (370)
Q Consensus 183 ~~v~~ay~~Q~~~D~~~fL~~Ra~EL~~GG~lvl~~ 218 (370)
....+ .+..+++.=.+=|+|||.+++.+
T Consensus 210 ~dGl~--------~~~~i~~~a~~~L~~~G~l~lEi 237 (274)
T d2b3ta1 210 DSGMA--------DIVHIIEQSRNALVSGGFLLLEH 237 (274)
T ss_dssp HHHTH--------HHHHHHHHHGGGEEEEEEEEEEC
T ss_pred cccch--------HHHHHHHHHHHhcCCCCEEEEEE
Confidence 11222 34457777777899999999975
|
| >d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Precorrin-6Y methyltransferase (CbiT) domain: Precorrin-6Y methyltransferase (CbiT) species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=96.89 E-value=0.00064 Score=57.73 Aligned_cols=100 Identities=19% Similarity=0.201 Sum_probs=60.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGA 126 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~ 126 (370)
+--+|+|+|||+|..|+.+. +. --+|+.-|.- +...+..++ ..+..
T Consensus 33 ~g~~VLDiGcGsG~~s~~lA--------~~---------~~~V~avD~~-----------~~~l~~a~~n~~~~gl~--- 81 (186)
T d1l3ia_ 33 KNDVAVDVGCGTGGVTLELA--------GR---------VRRVYAIDRN-----------PEAISTTEMNLQRHGLG--- 81 (186)
T ss_dssp TTCEEEEESCTTSHHHHHHH--------TT---------SSEEEEEESC-----------HHHHHHHHHHHHHTTCC---
T ss_pred CCCEEEEEECCeEccccccc--------cc---------ceEEEEecCC-----------HHHHHHHHHHHHHcCCC---
Confidence 45689999999999987655 21 1357777764 333222221 12221
Q ss_pred CCceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 127 ~~~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
.++ -.+.|++.+-+++..++|.+++.-..+ ++..+++.=.+
T Consensus 82 -~~v--~~~~gda~~~~~~~~~~D~v~~~~~~~------------------------------------~~~~~~~~~~~ 122 (186)
T d1l3ia_ 82 -DNV--TLMEGDAPEALCKIPDIDIAVVGGSGG------------------------------------ELQEILRIIKD 122 (186)
T ss_dssp -TTE--EEEESCHHHHHTTSCCEEEEEESCCTT------------------------------------CHHHHHHHHHH
T ss_pred -cce--EEEECchhhcccccCCcCEEEEeCccc------------------------------------cchHHHHHHHH
Confidence 233 123358877778889999998752110 11224555677
Q ss_pred hhccCceEEEEee
Q 017514 207 ELVAEGRMVLTFL 219 (370)
Q Consensus 207 EL~~GG~lvl~~~ 219 (370)
-|+|||+|++...
T Consensus 123 ~LkpgG~lvi~~~ 135 (186)
T d1l3ia_ 123 KLKPGGRIIVTAI 135 (186)
T ss_dssp TEEEEEEEEEEEC
T ss_pred HhCcCCEEEEEee
Confidence 7999999998764
|
| >d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.85 E-value=0.0021 Score=61.60 Aligned_cols=22 Identities=5% Similarity=-0.016 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHhhccCceEEEE
Q 017514 196 DFSLFLKCRSEELVAEGRMVLT 217 (370)
Q Consensus 196 D~~~fL~~Ra~EL~~GG~lvl~ 217 (370)
|+...|+...+.|||||++|..
T Consensus 311 ~l~~~L~ei~r~LKPGGrIVs~ 332 (406)
T d1u2za_ 311 DLNKKVEKILQTAKVGCKIISL 332 (406)
T ss_dssp HHHHHHHHHHTTCCTTCEEEES
T ss_pred HHHHHHHHHHHhcCCCcEEEEe
Confidence 4455788889999999999863
|
| >d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Sulfolobus tokodaii [TaxId: 111955]
Probab=96.72 E-value=0.0015 Score=57.63 Aligned_cols=20 Identities=25% Similarity=0.370 Sum_probs=16.4
Q ss_pred CceEEEeecCCCCcchHHHH
Q 017514 50 TKVAIADLGCSSGPNTLLVA 69 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~ 69 (370)
..-+|+|+|||+|..|..+.
T Consensus 70 ~g~~VLdIG~GsGy~ta~La 89 (224)
T d1vbfa_ 70 KGQKVLEIGTGIGYYTALIA 89 (224)
T ss_dssp TTCEEEEECCTTSHHHHHHH
T ss_pred ccceEEEecCCCCHHHHHHH
Confidence 35699999999999987544
|
| >d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein TM0748 species: Thermotoga maritima [TaxId: 2336]
Probab=96.62 E-value=0.0058 Score=55.08 Aligned_cols=35 Identities=26% Similarity=0.316 Sum_probs=25.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLP 98 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp 98 (370)
.-.+|+|+|||+|..|+.+. +.. + |.-+|+--|.-
T Consensus 103 pG~~VLDiG~GsG~lt~~lA--------~~~---~---~~G~V~~vD~~ 137 (266)
T d1o54a_ 103 EGDRIIDTGVGSGAMCAVLA--------RAV---G---SSGKVFAYEKR 137 (266)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------HHT---T---TTCEEEEECCC
T ss_pred CCCEEEECCCCCCHHHHHHH--------HHh---C---CCcEEEEEeCC
Confidence 45899999999999988766 321 1 44677777764
|
| >d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.43 E-value=0.0077 Score=52.82 Aligned_cols=111 Identities=15% Similarity=0.164 Sum_probs=62.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHH-HhhCCCCCCCC
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILR-KQLGSASGAAG 128 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~-~~~~~~~~~~~ 128 (370)
+.-+|+|+|||+|..|..+. +.+...|.. +...|+--|.- ..|++.......... ...+.. +
T Consensus 80 ~g~~VLeIGtGsGY~ta~la--------~l~g~~g~~-~~~~V~~iE~~----~~l~~~a~~~l~~~~~~~~~~~----n 142 (223)
T d1r18a_ 80 PGARILDVGSGSGYLTACFY--------RYIKAKGVD-ADTRIVGIEHQ----AELVRRSKANLNTDDRSMLDSG----Q 142 (223)
T ss_dssp TTCEEEEESCTTSHHHHHHH--------HHHHHSCCC-TTCEEEEEESC----HHHHHHHHHHHHHHHHHHHHHT----S
T ss_pred CCCeEEEecCCCCHHHHHHH--------HHhhhccCC-cccEEEEEecC----HHHHHHHHHhhhhcchhhcCcc----E
Confidence 45799999999999988664 333222322 23456554442 222222211111110 001110 1
Q ss_pred ceEEeecCCCcccccCCCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~EL 208 (370)
-.+.. |+.+.-..+.+.+|.++...+++ ++|+. + -+-|
T Consensus 143 v~~~~---~d~~~~~~~~~~fD~Iiv~~a~~---~~p~~--------------------------------l----~~~L 180 (223)
T d1r18a_ 143 LLIVE---GDGRKGYPPNAPYNAIHVGAAAP---DTPTE--------------------------------L----INQL 180 (223)
T ss_dssp EEEEE---SCGGGCCGGGCSEEEEEECSCBS---SCCHH--------------------------------H----HHTE
T ss_pred EEEEe---cccccccccccceeeEEEEeech---hchHH--------------------------------H----HHhc
Confidence 23433 36666667788899999998864 55631 1 3579
Q ss_pred ccCceEEEEee
Q 017514 209 VAEGRMVLTFL 219 (370)
Q Consensus 209 ~~GG~lvl~~~ 219 (370)
+|||+||+...
T Consensus 181 k~gG~lV~pvg 191 (223)
T d1r18a_ 181 ASGGRLIVPVG 191 (223)
T ss_dssp EEEEEEEEEES
T ss_pred CCCcEEEEEEe
Confidence 99999988654
|
| >d1af7a2 c.66.1.8 (A:92-284) Chemotaxis receptor methyltransferase CheR, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Chemotaxis receptor methyltransferase CheR, C-terminal domain domain: Chemotaxis receptor methyltransferase CheR, C-terminal domain species: Salmonella typhimurium [TaxId: 90371]
Probab=95.95 E-value=0.034 Score=47.07 Aligned_cols=43 Identities=19% Similarity=0.268 Sum_probs=27.4
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLP 98 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp 98 (370)
.+++||.+.|||+|-=...+.--+- +.. ......++++..|.-
T Consensus 23 ~~~lrIwsaGCstGeE~YSlA~~l~----e~~---~~~~~~~~I~atDi~ 65 (193)
T d1af7a2 23 HGEYRVWSAAASTGEEPYSIAITLA----DAL---GMAPGRWKVFASDID 65 (193)
T ss_dssp CSCEEEEESCCTTTHHHHHHHHHHH----HHH---CSCTTSEEEEEEESC
T ss_pred CCCeEEEEeCCCCchhHHHHHHHHH----Hhh---hhcCCceEEEeecCC
Confidence 4679999999999975433332222 221 122346899999984
|
| >d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein FLJ20628 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.86 E-value=0.025 Score=52.22 Aligned_cols=19 Identities=21% Similarity=0.396 Sum_probs=17.2
Q ss_pred ceEEEeecCCCCcchHHHH
Q 017514 51 KVAIADLGCSSGPNTLLVA 69 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~ 69 (370)
--+|+|+|||+|..|+.+.
T Consensus 99 G~rVLE~GtGsG~lt~~LA 117 (324)
T d2b25a1 99 GDTVLEAGSGSGGMSLFLS 117 (324)
T ss_dssp TCEEEEECCTTSHHHHHHH
T ss_pred CCEEEEecccccHHHHHHH
Confidence 4799999999999999777
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=95.04 E-value=0.064 Score=46.45 Aligned_cols=83 Identities=14% Similarity=0.172 Sum_probs=46.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCCc
Q 017514 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (370)
+.-+|+|+|||+|..|..+. +.+ | -+|+.-|.- -.|..... .-.++.+.. +.
T Consensus 78 ~g~~VLeIGsGsGY~taila--------~l~---g-----~~V~~ie~~----~~l~~~a~----~~l~~~g~~----nv 129 (215)
T d1jg1a_ 78 PGMNILEVGTGSGWNAALIS--------EIV---K-----TDVYTIERI----PELVEFAK----RNLERAGVK----NV 129 (215)
T ss_dssp TTCCEEEECCTTSHHHHHHH--------HHH---C-----SCEEEEESC----HHHHHHHH----HHHHHTTCC----SE
T ss_pred ccceEEEecCCCChhHHHHH--------Hhh---C-----ceeEEEecc----HHHHHHHH----HHHHHcCCc----ee
Confidence 34699999999999998554 222 1 112222221 11111111 111222321 34
Q ss_pred eEEeecCCCcccccCCCCceeEEEeccccccccCCCC
Q 017514 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPD 166 (370)
Q Consensus 130 ~f~~~vpgSFy~~l~p~~sv~~~~S~~alhWls~~P~ 166 (370)
.+..| +-+.-..+.+..|.++...++.. +|+
T Consensus 130 ~~~~g---d~~~g~~~~~pfD~Iiv~~a~~~---ip~ 160 (215)
T d1jg1a_ 130 HVILG---DGSKGFPPKAPYDVIIVTAGAPK---IPE 160 (215)
T ss_dssp EEEES---CGGGCCGGGCCEEEEEECSBBSS---CCH
T ss_pred EEEEC---ccccCCcccCcceeEEeeccccc---CCH
Confidence 56555 55556667788999999888864 564
|
| >d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Thermotoga maritima [TaxId: 2336]
Probab=94.76 E-value=0.065 Score=48.12 Aligned_cols=72 Identities=26% Similarity=0.392 Sum_probs=42.5
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHH-H--hhCCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILR-K--QLGSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~-~--~~~~~~~~~ 127 (370)
..+++|+|||+|.-++.+. +. |..+|+..|.- +.-...-+ + ..+. .
T Consensus 111 ~~~vld~g~GsG~i~~~la--------~~--------~~~~v~a~Dis-----------~~Al~~A~~Na~~~~~----~ 159 (271)
T d1nv8a_ 111 IKTVADIGTGSGAIGVSVA--------KF--------SDAIVFATDVS-----------SKAVEIARKNAERHGV----S 159 (271)
T ss_dssp CCEEEEESCTTSHHHHHHH--------HH--------SSCEEEEEESC-----------HHHHHHHHHHHHHTTC----T
T ss_pred ccEEEEeeeeeehhhhhhh--------hc--------ccceeeechhh-----------hhHHHHHHHHHHHcCC----C
Confidence 4689999999997655433 22 56889999985 32211111 1 1121 1
Q ss_pred CceEEeecCCCcccccCC-CCceeEEEec
Q 017514 128 GQCFFTGVPGSFYGRLFP-RNSVHLFHSS 155 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~p-~~sv~~~~S~ 155 (370)
..+++. -++++..+.. .+.+|+++|+
T Consensus 160 ~~~~i~--~~~~~~~~~~~~~~fDlIVsN 186 (271)
T d1nv8a_ 160 DRFFVR--KGEFLEPFKEKFASIEMILSN 186 (271)
T ss_dssp TSEEEE--ESSTTGGGGGGTTTCCEEEEC
T ss_pred ceeEEe--ecccccccccccCcccEEEEc
Confidence 334433 2477665442 3689999997
|
| >d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein TTHA1280, middle and C-terminal domains species: Thermus thermophilus [TaxId: 274]
Probab=93.61 E-value=0.22 Score=45.20 Aligned_cols=114 Identities=14% Similarity=-0.029 Sum_probs=64.8
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~~ 127 (370)
--+|+|++|++|..|+.+. .. --+|+..|.- +...+..+. ..|-+
T Consensus 146 g~rVLDl~~gtG~~s~~~a--------~g---------~~~V~~vD~s-----------~~al~~a~~n~~~ngl~---- 193 (318)
T d1wxxa2 146 GERALDVFSYAGGFALHLA--------LG---------FREVVAVDSS-----------AEALRRAEENARLNGLG---- 193 (318)
T ss_dssp EEEEEEETCTTTHHHHHHH--------HH---------EEEEEEEESC-----------HHHHHHHHHHHHHTTCT----
T ss_pred CCeeeccCCCCcHHHHHHH--------hc---------CCcEEeecch-----------HHHHHHHHHHHHHcCCC----
Confidence 4799999999999887543 21 1467777775 222222211 12221
Q ss_pred CceEEeecCCCcccccC-CCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 128 GQCFFTGVPGSFYGRLF-PRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l~-p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
.-.|+.+=...+-+++. ..+++|+++.- .|.... +... .....+++..++..-.+
T Consensus 194 ~~~~i~~d~~~~~~~~~~~~~~fD~Vi~D--------pP~~~~-----------~~~~-----~~~~~~~~~~l~~~a~~ 249 (318)
T d1wxxa2 194 NVRVLEANAFDLLRRLEKEGERFDLVVLD--------PPAFAK-----------GKKD-----VERAYRAYKEVNLRAIK 249 (318)
T ss_dssp TEEEEESCHHHHHHHHHHTTCCEEEEEEC--------CCCSCC-----------STTS-----HHHHHHHHHHHHHHHHH
T ss_pred CcceeeccHHHHhhhhHhhhcCCCEEEEc--------CCcccc-----------chHH-----HHHHHHHHHHHHHHHHH
Confidence 23454442222323333 45678888764 233211 1111 22344566678888899
Q ss_pred hhccCceEEEEeec
Q 017514 207 ELVAEGRMVLTFLG 220 (370)
Q Consensus 207 EL~~GG~lvl~~~g 220 (370)
-|+|||.|++....
T Consensus 250 lLkpGG~Lv~~scs 263 (318)
T d1wxxa2 250 LLKEGGILATASCS 263 (318)
T ss_dssp TEEEEEEEEEEECC
T ss_pred HcCCCCEEEEEeCC
Confidence 99999999887654
|
| >d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Met-10+ protein-like domain: Hypothetical protein PH0793 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=93.33 E-value=0.55 Score=41.28 Aligned_cols=32 Identities=16% Similarity=0.105 Sum_probs=25.3
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLP 98 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp 98 (370)
--+|+|+|||+|+.|+.++ ++ ..-+|+..|+-
T Consensus 108 g~~VlD~~aG~G~~~l~~a--------~~--------~~~~V~avd~n 139 (260)
T d2frna1 108 DELVVDMFAGIGHLSLPIA--------VY--------GKAKVIAIEKD 139 (260)
T ss_dssp TCEEEETTCTTTTTHHHHH--------HH--------TCCEEEEECCC
T ss_pred ccEEEECcceEcHHHHHHH--------Hh--------CCcEEEEecCC
Confidence 4799999999999998766 32 12579999985
|
| >d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermotoga maritima [TaxId: 2336]
Probab=92.53 E-value=0.13 Score=43.46 Aligned_cols=25 Identities=28% Similarity=0.424 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHhhccCceEEEEee
Q 017514 195 RDFSLFLKCRSEELVAEGRMVLTFL 219 (370)
Q Consensus 195 ~D~~~fL~~Ra~EL~~GG~lvl~~~ 219 (370)
.....+|..+..-|+|||+|++..+
T Consensus 118 ~~~~~~L~~a~~~Lk~gG~l~ii~f 142 (192)
T d1m6ya2 118 ENLKEFLKKAEDLLNPGGRIVVISF 142 (192)
T ss_dssp HHHHHHHHHGGGGEEEEEEEEEEES
T ss_pred hhHHHHHHHHHHhcCCCCeeeeecc
Confidence 3456689999999999999998775
|
| >d2h00a1 c.66.1.54 (A:5-254) Methyltransferase 10 domain containing protein METT10D {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Methyltransferase 10 domain domain: Methyltransferase 10 domain containing protein METT10D species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.36 E-value=0.25 Score=43.31 Aligned_cols=77 Identities=8% Similarity=-0.042 Sum_probs=47.6
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHH-H--hhCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILR-K--QLGSASG 125 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~-~--~~~~~~~ 125 (370)
.+..+|+|+|||+|..++.+. .++ |..+++..|.- +...+.-. + ..+..
T Consensus 60 ~~~~~~LDiGtGsg~I~~~l~--------~~~-------~~~~~~~~Di~-----------~~al~~A~~N~~~n~l~-- 111 (250)
T d2h00a1 60 STLRRGIDIGTGASCIYPLLG--------ATL-------NGWYFLATEVD-----------DMCFNYAKKNVEQNNLS-- 111 (250)
T ss_dssp CCCCEEEEESCTTTTHHHHHH--------HHH-------HCCEEEEEESC-----------HHHHHHHHHHHHHTTCT--
T ss_pred cccceEEEeCCCchHHHHHHH--------HhC-------CCccccceecC-----------HHHHHHHHHHHHHhCCC--
Confidence 457899999999999988776 332 45889999985 22211111 1 11211
Q ss_pred CCCceEEe--ecCCCcccccC--CCCceeEEEec
Q 017514 126 AAGQCFFT--GVPGSFYGRLF--PRNSVHLFHSS 155 (370)
Q Consensus 126 ~~~~~f~~--~vpgSFy~~l~--p~~sv~~~~S~ 155 (370)
..+.+. .....++..++ ..+++|+++|+
T Consensus 112 --~~~~~~~~~~~~~~~~~~~~~~~~~fD~ivsN 143 (250)
T d2h00a1 112 --DLIKVVKVPQKTLLMDALKEESEIIYDFCMCN 143 (250)
T ss_dssp --TTEEEEECCTTCSSTTTSTTCCSCCBSEEEEC
T ss_pred --cceeeeeeccHHhhhhhhhhcccCceeEEEec
Confidence 233332 24556666665 35579999996
|
| >d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein PH1915, middle and C-terminal domains species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=91.72 E-value=0.58 Score=42.32 Aligned_cols=114 Identities=12% Similarity=0.045 Sum_probs=65.8
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHH---hhCCCCCCC
Q 017514 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGAA 127 (370)
Q Consensus 51 ~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~---~~~~~~~~~ 127 (370)
--+|+|+||++|..|+.++ .. | . -+|+..|+- +...+...+ .+|-..
T Consensus 146 g~~VLDl~~g~G~~si~~a--------~~----g---a-~~V~~vD~s-----------~~al~~a~~N~~~ngl~~--- 195 (324)
T d2as0a2 146 GDRVLDVFTYTGGFAIHAA--------IA----G---A-DEVIGIDKS-----------PRAIETAKENAKLNGVED--- 195 (324)
T ss_dssp TCEEEETTCTTTHHHHHHH--------HT----T---C-SEEEEEESC-----------HHHHHHHHHHHHHTTCGG---
T ss_pred CCeeecccCcccchhhhhh--------hc----C---C-cEEEeecCC-----------HHHHHHHHHHHHHcCCCc---
Confidence 3699999999999988655 21 2 2 478888885 332222221 112110
Q ss_pred CceEEeecCCCccccc---C-CCCceeEEEeccccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017514 128 GQCFFTGVPGSFYGRL---F-PRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKC 203 (370)
Q Consensus 128 ~~~f~~~vpgSFy~~l---~-p~~sv~~~~S~~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~ 203 (370)
+..|..| +.++-+ . ...++|++++- .|. .... ... .....+++..++..
T Consensus 196 ~~~~~~~---d~~~~~~~~~~~~~~fD~Vi~D--------pP~-~~~~----------~~~-----~~~~~~~y~~l~~~ 248 (324)
T d2as0a2 196 RMKFIVG---SAFEEMEKLQKKGEKFDIVVLD--------PPA-FVQH----------EKD-----LKAGLRAYFNVNFA 248 (324)
T ss_dssp GEEEEES---CHHHHHHHHHHTTCCEEEEEEC--------CCC-SCSS----------GGG-----HHHHHHHHHHHHHH
T ss_pred cceeeec---hhhhhhHHHHhccCCCCchhcC--------Ccc-ccCC----------HHH-----HHHHHHHHHHHHHH
Confidence 2234443 554332 1 45678888763 232 2211 111 12334566678888
Q ss_pred HHHhhccCceEEEEeecc
Q 017514 204 RSEELVAEGRMVLTFLGR 221 (370)
Q Consensus 204 Ra~EL~~GG~lvl~~~g~ 221 (370)
-.+=|+|||+|++.....
T Consensus 249 a~~ll~pGG~lv~~s~s~ 266 (324)
T d2as0a2 249 GLNLVKDGGILVTCSCSQ 266 (324)
T ss_dssp HHTTEEEEEEEEEEECCT
T ss_pred HHHHcCCCcEEEEEeCCc
Confidence 888899999999987543
|
| >d2f8la1 c.66.1.45 (A:2-329) Hypothetical protein Lmo1582 {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N-6 DNA Methylase-like domain: Hypothetical protein Lmo1582 species: Listeria monocytogenes [TaxId: 1639]
Probab=89.75 E-value=0.29 Score=44.08 Aligned_cols=129 Identities=12% Similarity=-0.023 Sum_probs=65.7
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCCCCchHHHHHhhHHHHHHHHHhhCCCCCCCC
Q 017514 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (370)
Q Consensus 49 ~~~~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (370)
.+..+|+|.|||+|...+.++. .+.++ ..+.++++-.|.- =. ..+ +.... . ...+. .
T Consensus 116 ~~~~~vlDp~~GsG~~l~~~~~----~l~~~------~~~~~~~~g~di~---~~-~~~-~a~~~--~-~~~~~-----~ 172 (328)
T d2f8la1 116 KKNVSILDPACGTANLLTTVIN----QLELK------GDVDVHASGVDVD---DL-LIS-LALVG--A-DLQRQ-----K 172 (328)
T ss_dssp CSEEEEEETTCTTSHHHHHHHH----HHHTT------SSCEEEEEEEESC---HH-HHH-HHHHH--H-HHHTC-----C
T ss_pred CCCCEEEeCCCCcchhHHHHHH----HHHhc------cCccceEEEeccc---HH-HHH-HHHHH--H-HHhhh-----h
Confidence 4568999999999977554442 22221 2345788888863 11 111 11100 0 01122 2
Q ss_pred ceEEeecCCCcccccCCCCceeEEEec--cccccccCCCCCccCCCceeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017514 129 QCFFTGVPGSFYGRLFPRNSVHLFHSS--YSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (370)
Q Consensus 129 ~~f~~~vpgSFy~~l~p~~sv~~~~S~--~alhWls~~P~~~~~nk~~i~~~~~s~~~v~~ay~~Q~~~D~~~fL~~Ra~ 206 (370)
..+..+ ++. ...|...+|+++++ |..+|....-. +....+....+ .. ...|+..=.+
T Consensus 173 ~~~~~~---d~~-~~~~~~~fD~vi~NPPy~~~~~~~~~~----~~~~~~~~~~~-----~~--------~~~Fi~~~~~ 231 (328)
T d2f8la1 173 MTLLHQ---DGL-ANLLVDPVDVVISDLPVGYYPDDENAK----TFELCREEGHS-----FA--------HFLFIEQGMR 231 (328)
T ss_dssp CEEEES---CTT-SCCCCCCEEEEEEECCCSEESCHHHHT----TSTTCCSSSCE-----EH--------HHHHHHHHHH
T ss_pred hhhhcc---ccc-cccccccccccccCCCCCCCccchhhh----hcchhcccCcc-----hH--------HHHHHHHHHH
Confidence 233222 332 34577889999988 22222211000 00000000011 01 1238888889
Q ss_pred hhccCceEEEEeecc
Q 017514 207 ELVAEGRMVLTFLGR 221 (370)
Q Consensus 207 EL~~GG~lvl~~~g~ 221 (370)
-|+|||+++++++..
T Consensus 232 ~Lk~~G~~~~I~p~~ 246 (328)
T d2f8la1 232 YTKPGGYLFFLVPDA 246 (328)
T ss_dssp TEEEEEEEEEEEEGG
T ss_pred hcCCCCceEEEecCc
Confidence 999999999999853
|
| >d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Methyltransferase TTHA0928 species: Thermus thermophilus [TaxId: 274]
Probab=85.30 E-value=0.23 Score=40.79 Aligned_cols=20 Identities=25% Similarity=0.102 Sum_probs=15.8
Q ss_pred CceEEEeecCCCCcchHHHH
Q 017514 50 TKVAIADLGCSSGPNTLLVA 69 (370)
Q Consensus 50 ~~~~IaD~Gcs~G~Ns~~~~ 69 (370)
+.-+|+|+|||+|..++..+
T Consensus 41 ~g~~vLDl~~G~G~~~i~a~ 60 (171)
T d1ws6a1 41 RRGRFLDPFAGSGAVGLEAA 60 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHH
T ss_pred CCCeEEEeccccchhhhhhh
Confidence 34589999999998876544
|
| >d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein Ta1320 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=82.70 E-value=0.26 Score=41.83 Aligned_cols=18 Identities=17% Similarity=0.091 Sum_probs=14.8
Q ss_pred eEEEeecCCCCcchHHHH
Q 017514 52 VAIADLGCSSGPNTLLVA 69 (370)
Q Consensus 52 ~~IaD~Gcs~G~Ns~~~~ 69 (370)
-+|+|+|||+|..++.+.
T Consensus 50 k~VLDlGcGtG~l~i~a~ 67 (197)
T d1ne2a_ 50 RSVIDAGTGNGILACGSY 67 (197)
T ss_dssp SEEEEETCTTCHHHHHHH
T ss_pred CEEEEeCCCCcHHHHHHH
Confidence 699999999998776544
|
| >d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein PH1948 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=81.21 E-value=0.32 Score=41.07 Aligned_cols=31 Identities=23% Similarity=0.323 Sum_probs=22.6
Q ss_pred eEEEeecCCCCcchHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCCC
Q 017514 52 VAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLP 98 (370)
Q Consensus 52 ~~IaD~Gcs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~i~v~~nDlp 98 (370)
-+|+|+|||+|..++.++ .+ | + ..|+..|.-
T Consensus 48 ~~vLDlg~GtG~l~i~a~--------~~----g---~-~~v~~vdi~ 78 (201)
T d1wy7a1 48 KVVADLGAGTGVLSYGAL--------LL----G---A-KEVICVEVD 78 (201)
T ss_dssp CEEEEETCTTCHHHHHHH--------HT----T---C-SEEEEEESC
T ss_pred CEEEECcCcchHHHHHHH--------Hc----C---C-CEEEEEcCc
Confidence 689999999998876544 22 1 2 578888874
|
| >d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein SMu776, middle and C-terminal domains species: Streptococcus mutans [TaxId: 1309]
Probab=80.02 E-value=1.6 Score=39.20 Aligned_cols=27 Identities=15% Similarity=0.283 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHhhccCceEEEEeec
Q 017514 194 QRDFSLFLKCRSEELVAEGRMVLTFLG 220 (370)
Q Consensus 194 ~~D~~~fL~~Ra~EL~~GG~lvl~~~g 220 (370)
.+|+...++.=.+=|+|||.|+++...
T Consensus 239 ~~~~~~L~~~a~~ll~pgG~l~~~scs 265 (317)
T d2b78a2 239 SKDYHKLIRQGLEILSENGLIIASTNA 265 (317)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 355566777777889999999987754
|