Citrus Sinensis ID: 017556
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 369 | ||||||
| 449439067 | 371 | PREDICTED: uncharacterized protein LOC10 | 0.956 | 0.951 | 0.613 | 1e-132 | |
| 225461788 | 369 | PREDICTED: uncharacterized protein LOC10 | 0.956 | 0.956 | 0.605 | 1e-123 | |
| 302142821 | 329 | unnamed protein product [Vitis vinifera] | 0.880 | 0.987 | 0.641 | 1e-123 | |
| 15219157 | 359 | trichome birefringence-like 42 [Arabidop | 0.905 | 0.930 | 0.608 | 1e-121 | |
| 297839747 | 359 | hypothetical protein ARALYDRAFT_316771 [ | 0.899 | 0.924 | 0.611 | 1e-120 | |
| 356544130 | 343 | PREDICTED: uncharacterized protein LOC10 | 0.837 | 0.900 | 0.657 | 1e-118 | |
| 359806860 | 342 | uncharacterized protein LOC100793795 pre | 0.837 | 0.903 | 0.654 | 1e-117 | |
| 255551531 | 360 | conserved hypothetical protein [Ricinus | 0.880 | 0.902 | 0.56 | 1e-112 | |
| 357459321 | 351 | hypothetical protein MTR_3g049330 [Medic | 0.878 | 0.923 | 0.567 | 1e-112 | |
| 356567743 | 361 | PREDICTED: uncharacterized protein LOC10 | 0.948 | 0.969 | 0.536 | 1e-111 |
| >gi|449439067|ref|XP_004137309.1| PREDICTED: uncharacterized protein LOC101211401 [Cucumis sativus] gi|449517381|ref|XP_004165724.1| PREDICTED: uncharacterized protein LOC101223343 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 221/360 (61%), Positives = 273/360 (75%), Gaps = 7/360 (1%)
Query: 12 LFFVFLLATLKAKVHANLTHSYGIITRTEQKQ-RHKNGCSYFEGSWVYDDSYPLYSSWNC 70
+F +FL L+ V H R + KQ + NGC ++EGSWVYD SYPLY + NC
Sbjct: 13 IFLIFLQIILRRGV----VHGDSFYERQKPKQWNNNNGCDFYEGSWVYDVSYPLYDASNC 68
Query: 71 PFLRGGFDCQRNGRPDKKYLKYRWQPSACNLPRFDGRDFLERYRRKKIMLVGDSLSNNMW 130
PF+ GF+CQ+NGRPD +YLK+RWQP C+LPRF+G D LERYR KKIM+VGDSLSNNMW
Sbjct: 69 PFIGDGFNCQKNGRPDSEYLKFRWQPRRCDLPRFNGEDLLERYRGKKIMVVGDSLSNNMW 128
Query: 131 LSLACMLHFAVPDSNYTISQKGLLSTFFLQEYETSVIWLKNGFLVDLVHDKIGKILKLDS 190
SL CMLH AVP+SNYT++ LSTFF EYETSV++LKNGFLVDLV +KIGK+LKL+S
Sbjct: 129 QSLTCMLHTAVPNSNYTLTTHNSLSTFFFPEYETSVMYLKNGFLVDLVKEKIGKVLKLES 188
Query: 191 ISTGHQWLGVDMLIFNTYHWWIHTGKSQKWDYFQVGRKIFKQMDRMEALKIALTTWAKWV 250
IS G +W VD++IFNTYHWW HTG + WD+FQVG K+ K+MDRMEA KI LTTW KW+
Sbjct: 189 ISRGDEWKNVDLMIFNTYHWWTHTGHYKTWDFFQVGDKLVKEMDRMEAFKIGLTTWGKWL 248
Query: 251 GSNIDFSKTKVFFQGVAAVHVDGREWGDPTAKGCDGQTEPMKGPKYPGPAHLGEAVVKSV 310
SNI+ S T VFFQGV+AVH+DG +WG+ + K C G+ +P+KG +YPGP+ GEA+ K+V
Sbjct: 249 DSNINPSNTIVFFQGVSAVHIDGNDWGEASTKNCQGEKQPIKGSRYPGPSLEGEAIAKNV 308
Query: 311 ISSMAKPAYLLDITLLTQLRRDGHPSVYT--GRGSAFDDCSHWCLAGVPDTWNQLLYTAL 368
+S + P YLLD+TLLTQLR+DGHPS YT + DCSHWCLAGVPDTWN +L+ L
Sbjct: 309 LSDIVTPVYLLDVTLLTQLRKDGHPSNYTTSNNSTPLLDCSHWCLAGVPDTWNLILFATL 368
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225461788|ref|XP_002283640.1| PREDICTED: uncharacterized protein LOC100264146 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|302142821|emb|CBI20116.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|15219157|ref|NP_177992.1| trichome birefringence-like 42 [Arabidopsis thaliana] gi|3834323|gb|AAC83039.1| F9K20.25 [Arabidopsis thaliana] gi|332198020|gb|AEE36141.1| trichome birefringence-like 42 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|297839747|ref|XP_002887755.1| hypothetical protein ARALYDRAFT_316771 [Arabidopsis lyrata subsp. lyrata] gi|297333596|gb|EFH64014.1| hypothetical protein ARALYDRAFT_316771 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|356544130|ref|XP_003540508.1| PREDICTED: uncharacterized protein LOC100818058 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|359806860|ref|NP_001241315.1| uncharacterized protein LOC100793795 precursor [Glycine max] gi|255645586|gb|ACU23287.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|255551531|ref|XP_002516811.1| conserved hypothetical protein [Ricinus communis] gi|223543899|gb|EEF45425.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|357459321|ref|XP_003599941.1| hypothetical protein MTR_3g049330 [Medicago truncatula] gi|355488989|gb|AES70192.1| hypothetical protein MTR_3g049330 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|356567743|ref|XP_003552076.1| PREDICTED: uncharacterized protein LOC100810342 [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 369 | ||||||
| TAIR|locus:2037498 | 359 | TBL42 "TRICHOME BIREFRINGENCE- | 0.951 | 0.977 | 0.589 | 1.6e-118 | |
| TAIR|locus:2099402 | 356 | TBL41 "TRICHOME BIREFRINGENCE- | 0.864 | 0.896 | 0.539 | 1.7e-98 | |
| TAIR|locus:2041574 | 367 | TBL39 "AT2G42570" [Arabidopsis | 0.959 | 0.964 | 0.487 | 2.2e-98 | |
| TAIR|locus:2029959 | 380 | TBL38 "AT1G29050" [Arabidopsis | 0.915 | 0.889 | 0.497 | 7.4e-98 | |
| TAIR|locus:2055425 | 385 | TBL37 "AT2G34070" [Arabidopsis | 0.875 | 0.838 | 0.493 | 9.7e-96 | |
| TAIR|locus:2055878 | 364 | AT2G31110 "AT2G31110" [Arabido | 0.861 | 0.873 | 0.512 | 2e-95 | |
| TAIR|locus:2178813 | 402 | PMR5 "AT5G58600" [Arabidopsis | 0.878 | 0.805 | 0.472 | 9.7e-80 | |
| TAIR|locus:2080280 | 379 | TBL36 "AT3G54260" [Arabidopsis | 0.864 | 0.841 | 0.411 | 1.5e-67 | |
| TAIR|locus:2045688 | 398 | TBL45 "AT2G30010" [Arabidopsis | 0.791 | 0.733 | 0.427 | 4.2e-63 | |
| TAIR|locus:2096094 | 475 | TBL6 "AT3G62390" [Arabidopsis | 0.915 | 0.711 | 0.386 | 8.8e-63 |
| TAIR|locus:2037498 TBL42 "TRICHOME BIREFRINGENCE-LIKE 42" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1167 (415.9 bits), Expect = 1.6e-118, P = 1.6e-118
Identities = 215/365 (58%), Positives = 274/365 (75%)
Query: 9 FYHLFFVFLLATLKAKVHANLTHSYGIIT-RTEQKQRHKNGCSYFEGSWVYDDSY-PLYS 66
F+ + F+ LL L +L+ YG++ +T ++ C+ ++G W+YD+S PLY
Sbjct: 3 FHQVLFLLLLIFL-----VDLS-DYGVLADKTNDGYKNATKCNIYQGRWIYDNSSNPLYG 56
Query: 67 SWNCPFLRGGFDCQRNGRPDKKYLKYRWQPSACNLPRFDGRDFLERYRRKKIMLVGDSLS 126
+ CPF+ G DCQ+ GRPDK YL YRWQP+ C++PRF+GRDFL R++ KKI+ VGDSLS
Sbjct: 57 TSTCPFI--GLDCQKFGRPDKNYLHYRWQPTGCDIPRFNGRDFLTRFKGKKILFVGDSLS 114
Query: 127 NNMWLSLACMLHFAVPDSNYTIS-QKGLLSTFFLQEYETSVIWLKNGFLVDLVHDKI-GK 184
NNMW+SL+CMLH AVP++ YT KGL STF + EY SV +LKNGFLVDLV DK G
Sbjct: 115 NNMWVSLSCMLHAAVPNAKYTFQLNKGL-STFTIPEYGISVNFLKNGFLVDLVSDKTRGL 173
Query: 185 ILKLDSISTGHQWLGVDMLIFNTYHWWIHTGKSQKWDYFQVGRKIFKQMDRMEALKIALT 244
ILKLDSIS G+QWLG D+ IFNT+HWW HTG+++ WDYFQ G KI K+M+RMEA KIALT
Sbjct: 174 ILKLDSISRGNQWLGSDVAIFNTFHWWSHTGRAKTWDYFQTGDKIVKEMNRMEAFKIALT 233
Query: 245 TWAKWVGSNIDFSKTKVFFQGVAAVHVDGREWGDPTAKGCDGQTEPMKGPKYPGPAHLGE 304
TW+KW+ NID SKT+VF+QGV+ VH++G EWG P K C G+T P++GP YPG + GE
Sbjct: 234 TWSKWIDHNIDPSKTRVFYQGVSPVHLNGGEWGKP-GKTCLGETVPVQGPSYPGRPNEGE 292
Query: 305 AVVKSVISSMAKPAYLLDITLLTQLRRDGHPSVYTGRGSAFDDCSHWCLAGVPDTWNQLL 364
A+VKSVI MAKP LLD+T +T++R+DGHPS+Y G G +DCSHWCL GVPD WNQLL
Sbjct: 293 AIVKSVIGRMAKPVELLDVTAMTEMRKDGHPSIYAGGGDRLNDCSHWCLPGVPDAWNQLL 352
Query: 365 YTALI 369
YTAL+
Sbjct: 353 YTALL 357
|
|
| TAIR|locus:2099402 TBL41 "TRICHOME BIREFRINGENCE-LIKE 41" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2041574 TBL39 "AT2G42570" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2029959 TBL38 "AT1G29050" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2055425 TBL37 "AT2G34070" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2055878 AT2G31110 "AT2G31110" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2178813 PMR5 "AT5G58600" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2080280 TBL36 "AT3G54260" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2045688 TBL45 "AT2G30010" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2096094 TBL6 "AT3G62390" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 369 | |||
| PLN02629 | 387 | PLN02629, PLN02629, powdery mildew resistance 5 | 1e-123 | |
| pfam13839 | 270 | pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera | 1e-91 | |
| pfam14416 | 55 | pfam14416, PMR5N, PMR5 N terminal Domain | 5e-27 |
| >gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 | Back alignment and domain information |
|---|
Score = 361 bits (927), Expect = e-123
Identities = 164/340 (48%), Positives = 213/340 (62%), Gaps = 13/340 (3%)
Query: 43 QRHKNGCSYFEGSWVYDDSYPLYSSWNCP-FLRGGFDCQRNGRPDKKYLKYRWQPSACNL 101
Q +++ C+ F G+WV DDSYPLY S +CP + F+CQ GRPD YLKYRWQP C L
Sbjct: 47 QANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCEL 106
Query: 102 PRFDGRDFLERYRRKKIMLVGDSLSNNMWLSLACMLHFAVPDSNYTISQKGLLSTFFLQE 161
PRF+G +FL + + K +M VGDSL N W SL C++ +VP + +S+ LSTF +
Sbjct: 107 PRFNGLEFLLKMKGKTVMFVGDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLD 166
Query: 162 YETSVIWLKNGFLVDLVHDKIGKILKLDSIS-TGHQWLGVDMLIFNTYHWWIHTGKSQKW 220
Y S+ + K +LVD+ + ++LKL+ IS + W D+LIFNT HWW H G Q W
Sbjct: 167 YGVSISFYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDADVLIFNTGHWWSHQGSLQGW 226
Query: 221 DYFQVGRKIFKQMDRMEALKIALTTWAKWVGSNIDFSKTKVFFQGVAAVHVDGREWG--- 277
DY + G ++ MDR+ AL+ AL TWA WV +N+D S+T+VFFQ ++ H + EW
Sbjct: 227 DYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEWSAGA 286
Query: 278 DPTAKGCDGQTEPMKGPKYPGPAHLGEAVVKSVISSMAKPAYLLDITLLTQLRRDGHPSV 337
T K C G+T PM G YPG VV VI M PAYLLDITLL++LR+DGHPS+
Sbjct: 287 STTTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHPSI 346
Query: 338 YTGRGSAFD--------DCSHWCLAGVPDTWNQLLYTALI 369
Y+G S DCSHWCL G+PDTWNQL YTAL
Sbjct: 347 YSGDLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTALF 386
|
Length = 387 |
| >gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 369 | |||
| PLN02629 | 387 | powdery mildew resistance 5 | 100.0 | |
| PF13839 | 263 | PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f | 100.0 | |
| PF14416 | 55 | PMR5N: PMR5 N terminal Domain | 99.94 | |
| cd01842 | 183 | SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG | 98.72 | |
| cd01829 | 200 | SGNH_hydrolase_peri2 SGNH_peri2; putative periplas | 96.75 | |
| cd01834 | 191 | SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG | 96.35 | |
| COG2845 | 354 | Uncharacterized protein conserved in bacteria [Fun | 93.62 | |
| cd01841 | 174 | NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfa | 83.37 | |
| cd01827 | 188 | sialate_O-acetylesterase_like1 sialate O-acetylest | 80.9 |
| >PLN02629 powdery mildew resistance 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-116 Score=864.92 Aligned_cols=326 Identities=49% Similarity=0.965 Sum_probs=302.6
Q ss_pred CCCCCCccccCceeeCCCCCCcCCCCCC-CCCCCcCccCCCCCCccccccceecCCCCCCCCCHHHHHHHHcCCeEEEEe
Q 017556 44 RHKNGCSYFEGSWVYDDSYPLYSSWNCP-FLRGGFDCQRNGRPDKKYLKYRWQPSACNLPRFDGRDFLERYRRKKIMLVG 122 (369)
Q Consensus 44 ~~~~~Cd~~~G~WV~d~~~plY~~~~Cp-~i~~~~~C~~nGRpD~~y~~wrWqP~~C~Lprfd~~~fl~~lrgk~i~FVG 122 (369)
..++.||+|+|+||+|+++|+|++++|| +|+++|||++|||||++|++|||||++|+||||||.+||++||||||||||
T Consensus 48 ~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FVG 127 (387)
T PLN02629 48 ANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFVG 127 (387)
T ss_pred CCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEec
Confidence 4567899999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHhhhccCCCCceeeeccCCceEEEeeecceEEEEEEcccccccccccCCceEeecCCcc-CCCCcccc
Q 017556 123 DSLSNNMWLSLACMLHFAVPDSNYTISQKGLLSTFFLQEYETSVIWLKNGFLVDLVHDKIGKILKLDSIST-GHQWLGVD 201 (369)
Q Consensus 123 DSl~Rn~~~SL~clL~~~~~~~~~~~~~~~~~~~~~f~~~n~tv~~~wspfLv~~~~~~~~~~l~lD~~~~-~~~w~~~D 201 (369)
|||+|||||||+|||++++|...+...+.++..+|+|++||+||+||||||||+.+.....++++||+++. ++.|+++|
T Consensus 128 DSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~~~~~~l~LD~id~~a~~w~~~D 207 (387)
T PLN02629 128 DSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDAD 207 (387)
T ss_pred cccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEeeecCCCceeEEecCcchhhhhhccCC
Confidence 99999999999999999988766666667788999999999999999999999987766667999999986 88999999
Q ss_pred EEEEeccccccccccCCcceeeecCceeeccCCHHHHHHHHHHHHHHHHhccCCCCCceEEEEeccCCCCCCCCCCCCC-
Q 017556 202 MLIFNTYHWWIHTGKSQKWDYFQVGRKIFKQMDRMEALKIALTTWAKWVGSNIDFSKTKVFFQGVAAVHVDGREWGDPT- 280 (369)
Q Consensus 202 vlV~ntG~Ww~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~aL~t~~~wv~~~l~~~~~~VffRt~sP~Hf~~g~W~~gg- 280 (369)
||||||||||.+.+..++|+|++.|+.++++|++.+||++||+||++||++++++.+++|||||+||+||+||+||+||
T Consensus 208 vlVfntghWw~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~vffrT~SP~Hfe~g~Wn~gg~ 287 (387)
T PLN02629 208 VLIFNTGHWWSHQGSLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEWSAGAS 287 (387)
T ss_pred EEEEeCccccCCCCeeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEecCcccccCCCcCCCCC
Confidence 9999999999999888999999999998999999999999999999999999988899999999999999999999986
Q ss_pred --CCCCCCCCccCCCCCCCCCChhHHHHHHHHHHhcCCCeeEeecccccccccCCCCCCCCCCC--------CCCCCccc
Q 017556 281 --AKGCDGQTEPMKGPKYPGPAHLGEAVVKSVISSMAKPAYLLDITLLTQLRRDGHPSVYTGRG--------SAFDDCSH 350 (369)
Q Consensus 281 --~~~C~~~t~P~~~~~~~~~~~~~~~~v~~v~~~~~~~v~lLDIt~ls~~R~DgHps~y~~~~--------~~~~DC~H 350 (369)
+++|+++|+|+.++.+.++...+++++++++++++.+|++||||+||++|||||||+|++.. ..++||+|
T Consensus 288 ~~~~~C~~et~P~~~~~~~~~~~~~~~~ve~v~~~~~~~v~lLDIT~ls~lR~DgHPs~Y~~~~~~~~~~~p~~~~DC~H 367 (387)
T PLN02629 288 TTTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHPSIYSGDLSPSQRANPDRSADCSH 367 (387)
T ss_pred CCCCCCccCCccCcCccccCcchHHHHHHHHHHHhcCCceEEEechhhhhcCCCCCcccccCCCchhhccCCCCCCCccc
Confidence 35899999999977766666677889999999999999999999999999999999997531 24689999
Q ss_pred ccCCCchHHHHHHHHHHhC
Q 017556 351 WCLAGVPDTWNQLLYTALI 369 (369)
Q Consensus 351 WClPGv~DtWNelL~~~L~ 369 (369)
|||||||||||||||++|+
T Consensus 368 WCLPGvpDTWNelL~a~L~ 386 (387)
T PLN02629 368 WCLPGLPDTWNQLFYTALF 386 (387)
T ss_pred ccCCCCCccHHHHHHHHHh
Confidence 9999999999999999985
|
|
| >PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >PF14416 PMR5N: PMR5 N terminal Domain | Back alignment and domain information |
|---|
| >cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >COG2845 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 369 | |||
| 4h08_A | 200 | Putative hydrolase; GDSL-like lipase/acylhydrolase | 97.05 |
| >4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0005 Score=60.17 Aligned_cols=91 Identities=12% Similarity=0.101 Sum_probs=53.8
Q ss_pred cccEEEEeccccccccccCCcceeeecCceeeccCCHHHHHHHHHHHHHHHHhccCCCCCceEEEEeccCCCCCCCCCCC
Q 017556 199 GVDMLIFNTYHWWIHTGKSQKWDYFQVGRKIFKQMDRMEALKIALTTWAKWVGSNIDFSKTKVFFQGVAAVHVDGREWGD 278 (369)
Q Consensus 199 ~~DvlV~ntG~Ww~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~aL~t~~~wv~~~l~~~~~~VffRt~sP~Hf~~g~W~~ 278 (369)
.+|+||++.|..=.. ...+.|+..|+++++-+.+. .++++|+|-+..|......
T Consensus 74 ~pd~Vvi~~G~ND~~--------------------~~~~~~~~~l~~ii~~l~~~--~p~~~ii~~~~~P~~~~~~---- 127 (200)
T 4h08_A 74 KFDVIHFNNGLHGFD--------------------YTEEEYDKSFPKLIKIIRKY--APKAKLIWANTTPVRTGEG---- 127 (200)
T ss_dssp CCSEEEECCCSSCTT--------------------SCHHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCCEESGG----
T ss_pred CCCeEEEEeeeCCCC--------------------CCHHHHHHHHHHHHHHHhhh--CCCccEEEeccCCCccccc----
Confidence 469999998864110 01357888888888776554 3578899999888743110
Q ss_pred CCCCCCCCCCccCCCCCCCCCChhHHHHHHHHHHhcCCCeeEeecccccc
Q 017556 279 PTAKGCDGQTEPMKGPKYPGPAHLGEAVVKSVISSMAKPAYLLDITLLTQ 328 (369)
Q Consensus 279 gg~~~C~~~t~P~~~~~~~~~~~~~~~~v~~v~~~~~~~v~lLDIt~ls~ 328 (369)
... .. .........+++++++.++. .+.++|+...+.
T Consensus 128 --------~~~-~~--~~~~~~~~~n~~~~~~a~~~--~v~~iD~~~~~~ 164 (200)
T 4h08_A 128 --------MKE-FA--PITERLNVRNQIALKHINRA--SIEVNDLWKVVI 164 (200)
T ss_dssp --------GCE-EC--THHHHHHHHHHHHHHHHHHT--TCEEECHHHHHT
T ss_pred --------ccc-cc--hhHHHHHHHHHHHHHHhhhc--ceEEEecHHhHh
Confidence 000 00 00000123456666666553 699999887654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 369 | |||
| d2o14a2 | 208 | Hypothetical protein YxiM {Bacillus subtilis [TaxI | 96.83 | |
| d3dc7a1 | 207 | Uncharacterized protein Lp3323 {Lactobacillus plan | 96.41 | |
| d3bzwa1 | 248 | Uncharacterized protein BT2961 {Bacteroides thetai | 83.74 |
| >d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: YxiM C-terminal domain-like domain: Hypothetical protein YxiM species: Bacillus subtilis [TaxId: 1423]
Probab=96.83 E-value=0.00079 Score=57.10 Aligned_cols=93 Identities=10% Similarity=0.048 Sum_probs=47.7
Q ss_pred CccccEEEEeccccccccccCCcceeeecCceeeccCCHHHHHHHHHHHHHHHHhccCCCCCceEEEEeccCCCCCCCCC
Q 017556 197 WLGVDMLIFNTYHWWIHTGKSQKWDYFQVGRKIFKQMDRMEALKIALTTWAKWVGSNIDFSKTKVFFQGVAAVHVDGREW 276 (369)
Q Consensus 197 w~~~DvlV~ntG~Ww~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~aL~t~~~wv~~~l~~~~~~VffRt~sP~Hf~~g~W 276 (369)
.+.+|+||+..|.-=. ...+. ...+.|+..|+.+++-+.+. ...+++-+..|. ... .
T Consensus 69 ~~~~D~vvi~~G~ND~----------~~~~~------~~~~~~~~~l~~li~~~~~~----~~~~vl~~~~~~-~~~-~- 125 (208)
T d2o14a2 69 IKPGDYFMLQLGINDT----------NPKHK------ESEAEFKEVMRDMIRQVKAK----GADVILSTPQGR-ATD-F- 125 (208)
T ss_dssp CCTTCEEEEECCTGGG----------CGGGC------CCHHHHHHHHHHHHHHHHTT----TCEEEEECCCCC-TTC-B-
T ss_pred cCCCCEEEEEcCCCcc----------ccccc------ccHHHHHHHHHHHHHHHHhc----CCceeecccccc-ccc-c-
Confidence 3446999998874311 11111 12467888888887765432 344555443332 110 0
Q ss_pred CCCCCCCCCCCCccCCCCCCCCCChhHHHHHHHHHHhcCCCeeEeecccccc
Q 017556 277 GDPTAKGCDGQTEPMKGPKYPGPAHLGEAVVKSVISSMAKPAYLLDITLLTQ 328 (369)
Q Consensus 277 ~~gg~~~C~~~t~P~~~~~~~~~~~~~~~~v~~v~~~~~~~v~lLDIt~ls~ 328 (369)
.. . .+. .......+++++++.++. ++.++|+..++.
T Consensus 126 ------~~--~-~~~-----~~~~~~~~~~~~~~a~~~--~v~~vD~~~~~~ 161 (208)
T d2o14a2 126 ------TS--E-GIH-----SSVNRWYRASILALAEEE--KTYLIDLNVLSS 161 (208)
T ss_dssp ------CT--T-SCB-----CCTTSTTHHHHHHHHHHT--TCEEECHHHHHH
T ss_pred ------cc--c-cch-----HHHHHHHHHHHHHhhccC--CcEEeccHHHHH
Confidence 00 0 000 011123456667766654 688999887763
|
| >d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
| >d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|