Citrus Sinensis ID: 017567

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------37
Protein Sequence
MALNLQIPAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSAQGPPPAWPGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIHPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSK
Secondary Structure (PSIPRED)
ccccccccccccEEEEEEcccccccccccccccccEEccccccccccEEEEcccccccccccccccccccccccccccEEEEccccHHHHHHHHHHHHccccEEEEEEEccccHHHHHHHHHHHcccEEEEccHHHHHHHHHHHHccccccEEEEcHHHHHHHHccccccEEEEHHHccccHHHHHHHHHHcccEEEcccHHHHcccHHHHHHHHHcccEEEcccccHHHHHHHccccccccccEEEEEEcccccccccHHHHHcccHHHHHccccccccccccccccccccHHHHHHHHHHccccccccEEEEEccccccEEcEEcccccEEEcccccccHHHHHHHccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccHHHccEEEEEcccccccccccccccEEEEEcccccEEEcEEEEEcccccccccccccccccccccccccEEEEEEccccHHHHHHHHHHccccccEEEEEEEccccHHHHHHHHHHHcccEEEEccHHHHHHHHHHHHccccccccEEcHHHHHHHHccccccEEEEccccHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHccEEEEccHHHHHHHHcccccHHHcEEEEEEEEcccccccccHHHHccccHHHHccccccccccHHHHHHHHcHHHHHHHHHHHHHHcccHHHEEEEEcccccEEEEEEEccccEEEEEcccccHHHHHHHHHccccccccccccccccccc
Coil and Loop (DISEMBL)
malnlqipAEIKALSFLETtrsnhrlpklsggfplkrkdnatatfgrivqcsaqgpppawpgravtetfrktwdgpkpisvlgstgsigtqTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANveekpeilagEQGVieaarhpdavTVVTGIVGCAGLKPTVAAIEAGKDIALANKEtliaggpfvlplahkhnikilpadsehSAIFQCIQGLPEGALRRIILTAsggafrdwpveklKEVKVADalkhpnwsmgkkitvDSATLFNKGLEVIEAHYLfgaeydnieiiihPQSIIHSMVetqdssvigqlgwpdmrlpiiytmswperiycseltwprldlsk
Flexible Loop (DISEMBL)
MALNLQIPAEIKALSFlettrsnhrlpklsggfplkRKDNATATFGRIvqcsaqgpppawpgRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNItlladqvkrfkpQVVAVRNESLLDEIKEALanveekpeiLAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASggafrdwpvEKLKEVKVAdalkhpnwsmgkkITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIHPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCseltwprldlsk
Low Complexity Region (SEG)
MALNLQIPAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSAQGPPPAWPGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNieiiihpqsiihsMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSK
Disordered region (IsUnstruct)
************ALSF************************ATATFGRIVQCSAQG**PAWPGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIHPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRL****
Disordered Region (DISOPRED)
********AEIKALSFLETTR******KLSGGFPLKRK****************************************ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIHPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSK
Disordered Region (DISEMBL)
MALNLQIPAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSAQGPPPAWPGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIHPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSK
Disordered Region (DISPRO)
**LNLQIPAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSAQGPPPAWPGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIHPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSK
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MALNLQIPAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSAQGPPPAWPGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVxxxxxxxxxxxxxxxxxxxxxPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIHPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	369	2.2.26 [Sep-21-2011]
Q9XES0	470	1-deoxy-D-xylulose 5-phos	N/A	no	0.978	0.768	0.816	1e-175
Q9XFS9	477	1-deoxy-D-xylulose 5-phos	yes	no	0.994	0.769	0.807	1e-174
Q8W250	473	1-deoxy-D-xylulose 5-phos	yes	no	0.997	0.778	0.786	1e-172
B0CD21	401	1-deoxy-D-xylulose 5-phos	yes	no	0.785	0.723	0.713	1e-125
B1WNP5	398	1-deoxy-D-xylulose 5-phos	yes	no	0.785	0.728	0.723	1e-124
B0JWW6	390	1-deoxy-D-xylulose 5-phos	yes	no	0.785	0.743	0.699	1e-122
B7K5G6	398	1-deoxy-D-xylulose 5-phos	yes	no	0.785	0.728	0.706	1e-121
B8HVK1	387	1-deoxy-D-xylulose 5-phos	yes	no	0.785	0.749	0.699	1e-121
B2ITX3	398	1-deoxy-D-xylulose 5-phos	yes	no	0.785	0.728	0.692	1e-121
Q8YP49	399	1-deoxy-D-xylulose 5-phos	yes	no	0.785	0.726	0.682	1e-120

>sp|Q9XES0|DXR_MENPI 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic OS=Mentha piperita GN=DXR PE=2 SV=2

 Score =  613 bits (1581), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 299/366 (81%), Positives = 329/366 (89%), Gaps = 5/366 (1%)

Query: 8   PAEIKALSFLETTRSNHRLP--KLSGGFPLKRKDNATATFGRIVQCSAQG--PPPAWPGR 63
           P EIK LSFL++++SN+ L   K  GGF  KRKD+   T  + V CSAQ   PPPAWPGR
Sbjct: 3   PTEIKTLSFLDSSKSNYNLNPLKFQGGFAFKRKDSG-CTAAKRVHCSAQSQSPPPAWPGR 61

Query: 64  AVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR 123
           A  E  R TW+GPKPISV+GSTGSIGTQTLDIVAE+ DKFR+VALAAGSN+TLLADQVK 
Sbjct: 62  AFPEPGRMTWEGPKPISVIGSTGSIGTQTLDIVAENPDKFRIVALAAGSNVTLLADQVKA 121

Query: 124 FKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLK 183
           FKP++V+V++ESL+ E+KEALA  E+ PEI+ GEQG+IE ARHPDAVTVVTGIVGCAGLK
Sbjct: 122 FKPKLVSVKDESLISELKEALAGFEDMPEIIPGEQGMIEVARHPDAVTVVTGIVGCAGLK 181

Query: 184 PTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGAL 243
           PTVAAIEAGKDIALANKETLIAGGPFVLPLA KHN+KILPADSEHSAIFQCIQGLPEGAL
Sbjct: 182 PTVAAIEAGKDIALANKETLIAGGPFVLPLAKKHNVKILPADSEHSAIFQCIQGLPEGAL 241

Query: 244 RRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYL 303
           RRIILTASGGAFRD PVEKLKEVKVADALKHPNW+MGKKITVDSATLFNKGLEVIEAHYL
Sbjct: 242 RRIILTASGGAFRDLPVEKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYL 301

Query: 304 FGAEYDNIEIIIHPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWP 363
           FGAEYD+IEI+IHPQSIIHSMVETQDSSV+ QLGWPDMRLPI+YT+SWPERIYCSE+TWP
Sbjct: 302 FGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTLSWPERIYCSEITWP 361

Query: 364 RLDLSK 369
           RLDL K
Sbjct: 362 RLDLCK 367

Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP).
Mentha piperita (taxid: 34256)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 6EC: 7

>sp|Q9XFS9|DXR_ARATH 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic OS=Arabidopsis thaliana GN=DXR PE=2 SV=2

 Score =  610 bits (1573), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 302/374 (80%), Positives = 340/374 (90%), Gaps = 7/374 (1%)

Query: 1   MALNLQIPAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSAQ-----G 55
           M LN   PAE KA+SFL+T+R N  +PKLSGGF L+R++     FG+ V+CS +      
Sbjct: 2   MTLNSLSPAESKAISFLDTSRFNP-IPKLSGGFSLRRRNQGRG-FGKGVKCSVKVQQQQQ 59

Query: 56  PPPAWPGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNIT 115
           PPPAWPGRAV E  R++WDGPKPIS++GSTGSIGTQTLDIVAE+ DKFRVVALAAGSN+T
Sbjct: 60  PPPAWPGRAVPEAPRQSWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVT 119

Query: 116 LLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTG 175
           LLADQV+RFKP +VAVRNESL++E+KEALA+++ K EI+ GEQGVIE ARHP+AVTVVTG
Sbjct: 120 LLADQVRRFKPALVAVRNESLINELKEALADLDYKLEIIPGEQGVIEVARHPEAVTVVTG 179

Query: 176 IVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 235
           IVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA+KHN+KILPADSEHSAIFQCI
Sbjct: 180 IVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLANKHNVKILPADSEHSAIFQCI 239

Query: 236 QGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGL 295
           QGLPEGALR+IILTASGGAFRDWPVEKLKEVKVADALKHPNW+MGKKITVDSATLFNKGL
Sbjct: 240 QGLPEGALRKIILTASGGAFRDWPVEKLKEVKVADALKHPNWNMGKKITVDSATLFNKGL 299

Query: 296 EVIEAHYLFGAEYDNIEIIIHPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERI 355
           EVIEAHYLFGAEYD+IEI+IHPQSIIHSM+ETQDSSV+ QLGWPDMRLPI+YTMSWP+R+
Sbjct: 300 EVIEAHYLFGAEYDDIEIVIHPQSIIHSMIETQDSSVLAQLGWPDMRLPILYTMSWPDRV 359

Query: 356 YCSELTWPRLDLSK 369
            CSE+TWPRLDL K
Sbjct: 360 PCSEVTWPRLDLCK 373

Enzyme of the plastid non-mevalonate pathway for isoprenoid biosynthesis that catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP). Required for chloroplast development.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 6

EC: 7

>sp|Q8W250|DXR_ORYSJ 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic OS=Oryza sativa subsp. japonica GN=DXR PE=2 SV=2

 Score =  603 bits (1554), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 291/370 (78%), Positives = 325/370 (87%), Gaps = 2/370 (0%)

Query: 1   MALNL-QIPAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSAQGPPPA 59
           MAL +   P ++ A+SFL++ R      +L    P + +D    +  R      Q PPPA
Sbjct: 1   MALKVVSFPGDLAAVSFLDSNRGGA-FNQLKVDLPFQTRDRRAVSLRRTCCSMQQAPPPA 59

Query: 60  WPGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD 119
           WPGRAV E  R++WDGPKPIS++GSTGSIGTQTLDIVAE+ DKFRVVALAAGSN+TLLAD
Sbjct: 60  WPGRAVVEPGRRSWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLAD 119

Query: 120 QVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGC 179
           QVK FKP++VAVRNESL+DE+KEALA+ + KPEI+ GEQGVIE ARHPDAVTVVTGIVGC
Sbjct: 120 QVKTFKPKLVAVRNESLVDELKEALADCDWKPEIIPGEQGVIEVARHPDAVTVVTGIVGC 179

Query: 180 AGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLP 239
           AGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA KH +KILPADSEHSAIFQCIQGLP
Sbjct: 180 AGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAQKHKVKILPADSEHSAIFQCIQGLP 239

Query: 240 EGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE 299
           EGALRRIILTASGGAFRDWPV+KLKEVKVADALKHPNW+MGKKITVDSATLFNKGLEVIE
Sbjct: 240 EGALRRIILTASGGAFRDWPVDKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIE 299

Query: 300 AHYLFGAEYDNIEIIIHPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSE 359
           AHYLFGAEYD+IEI+IHPQSIIHSM+ETQDSSV+ QLGWPDMR+PI+YTMSWP+RIYCSE
Sbjct: 300 AHYLFGAEYDDIEIVIHPQSIIHSMIETQDSSVLAQLGWPDMRIPILYTMSWPDRIYCSE 359

Query: 360 LTWPRLDLSK 369
           +TWPRLDL K
Sbjct: 360 VTWPRLDLCK 369

Enzyme of the plastid non-mevalonate pathway for isoprenoid biosynthesis that catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP). Required for chloroplast development.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 6

EC: 7

>sp|B0CD21|DXR_ACAM1 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Acaryochloris marina (strain MBIC 11017) GN=dxr PE=3 SV=1

 Score =  448 bits (1152), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 209/293 (71%), Positives = 257/293 (87%), Gaps = 3/293 (1%)

Query: 77  KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
           K I++LGSTGSIGTQTLDIVA++ D+FR+V +AAG NI LL+ Q+++F+P++VA+ + + 
Sbjct: 2   KAITLLGSTGSIGTQTLDIVAQYPDQFRIVGMAAGRNIELLSQQIRQFRPEIVAIADPNQ 61

Query: 137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
           L ++K+A+A+V+ +P++LAGE GV+E A + DA +VVTGIVGCAGL PT+AAI+AGKDIA
Sbjct: 62  LSDLKDAIADVDPQPQLLAGEAGVVEVAAYGDAESVVTGIVGCAGLLPTIAAIKAGKDIA 121

Query: 197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFR 256
           LANKETLIAGGP VLPL  KH +K+LPADSEHSAIFQC+QG+PEG LRRIILTASGGAFR
Sbjct: 122 LANKETLIAGGPVVLPLVEKHGVKLLPADSEHSAIFQCLQGVPEGGLRRIILTASGGAFR 181

Query: 257 DWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIH 316
           DWPVEKL EV VADALKHPNWSMGKKITVDSATL NKGLEVIEAHYLFG +YD+I+I+IH
Sbjct: 182 DWPVEKLPEVTVADALKHPNWSMGKKITVDSATLMNKGLEVIEAHYLFGVDYDHIDIVIH 241

Query: 317 PQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSK 369
           PQSIIHS++E QD+SV+ QLGWPDMRLP++Y++SWPERI      W +LDL K
Sbjct: 242 PQSIIHSLIELQDTSVLAQLGWPDMRLPLLYSLSWPERIATD---WEQLDLVK 291

Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP).

Acaryochloris marina (strain MBIC 11017) (taxid: 329726)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 6

EC: 7

>sp|B1WNP5|DXR_CYAA5 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Cyanothece sp. (strain ATCC 51142) GN=dxr PE=3 SV=1

 Score =  446 bits (1146), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 212/293 (72%), Positives = 253/293 (86%), Gaps = 3/293 (1%)

Query: 77  KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
           K IS+LGSTGSIGTQTLDIV ++ D+F+VV LA  SN+ LLA QV++F+P++VA+ +ES 
Sbjct: 2   KKISLLGSTGSIGTQTLDIVNQYPDQFQVVGLATRSNVELLATQVQQFRPEIVAICDESK 61

Query: 137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
           L  +K+A+A+++  P ILAGEQGV E ARH DA +VVTGIVGCAGL PT+AAIEAGKDIA
Sbjct: 62  LGSLKDAIASMDYSPLILAGEQGVAEVARHGDAESVVTGIVGCAGLLPTIAAIEAGKDIA 121

Query: 197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFR 256
           LANKETLIAGGP VLPL  KH +K+LPADSEHSAIFQC+QG+P+G LRRIILTASGGAFR
Sbjct: 122 LANKETLIAGGPVVLPLIEKHGVKLLPADSEHSAIFQCLQGVPDGGLRRIILTASGGAFR 181

Query: 257 DWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIH 316
           DWPVE+LK V V DALKHPNWSMG+KITVDSATL NKGLEVIEAH+LFG +Y+NI+I+IH
Sbjct: 182 DWPVEQLKYVTVQDALKHPNWSMGQKITVDSATLMNKGLEVIEAHFLFGMDYENIDIVIH 241

Query: 317 PQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSK 369
           PQSIIHS++E QD+SV+ QLGWPDMRLP++Y +SWPERIY     W +LDL K
Sbjct: 242 PQSIIHSLIEVQDTSVLAQLGWPDMRLPLLYALSWPERIYTD---WEQLDLVK 291

Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP).

Cyanothece sp. (strain ATCC 51142) (taxid: 43989)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 6

EC: 7

>sp|B0JWW6|DXR_MICAN 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Microcystis aeruginosa (strain NIES-843) GN=dxr PE=3 SV=1

 Score =  437 bits (1124), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 205/293 (69%), Positives = 252/293 (86%), Gaps = 3/293 (1%)

Query: 77  KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
           K IS+LGSTGSIGTQTLDIV +H DKF+VV LA G+NI LL++Q+++F+PQ+VA+ NES 
Sbjct: 2   KKISILGSTGSIGTQTLDIVTDHPDKFQVVGLATGNNIQLLSEQIRQFRPQIVAINNESQ 61

Query: 137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
           L+++K  +++++  P ILAG++GVIE AR+ D+ +VVTGIVGCAGL PT+AAI AGKDIA
Sbjct: 62  LEDLKSLISDLDYTPIILAGKEGVIEVARYGDSESVVTGIVGCAGLLPTIAAITAGKDIA 121

Query: 197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFR 256
           LANKETLIAGGP VLPL  KH +K+LPADSEHSAIFQC+QG+P G L++IILTASGGAFR
Sbjct: 122 LANKETLIAGGPVVLPLVEKHRVKLLPADSEHSAIFQCLQGVPTGGLKKIILTASGGAFR 181

Query: 257 DWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIH 316
           D PVEKL +V VADALKHPNWSMG+KIT+DSATL NKGLEVIEAHYLFG +Y+ I+I+IH
Sbjct: 182 DLPVEKLPQVTVADALKHPNWSMGRKITIDSATLMNKGLEVIEAHYLFGVDYNAIDIVIH 241

Query: 317 PQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSK 369
           PQSIIHS++E QD+SV+ QLGWPDMRLP++Y +SWPERIY     W  L+L K
Sbjct: 242 PQSIIHSLIELQDTSVLAQLGWPDMRLPLLYALSWPERIYTD---WEPLNLVK 291

Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP).

Microcystis aeruginosa (strain NIES-843) (taxid: 449447)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 6

EC: 7

>sp|B7K5G6|DXR_CYAP8 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Cyanothece sp. (strain PCC 8801) GN=dxr PE=3 SV=1

 Score =  436 bits (1120), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 207/293 (70%), Positives = 249/293 (84%), Gaps = 3/293 (1%)

Query: 77  KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
           K I++LGSTGSIGTQTLDIV ++ D+F+VV LA  +N  LLA Q+K+F+P++VA+  ES 
Sbjct: 2   KKITILGSTGSIGTQTLDIVQQYPDQFQVVGLATRNNGELLAQQIKQFRPEIVAICQESQ 61

Query: 137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
           L+ IK+A+A+++  P +L GE GV+E AR+ D+ +VVTGIVGCAGL PT+AAIEAGKDIA
Sbjct: 62  LNTIKDAIASLDYSPILLTGEAGVVEVARYGDSESVVTGIVGCAGLLPTIAAIEAGKDIA 121

Query: 197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFR 256
           LANKETLIAGGP VLPL  KH +K+LPADSEHSAIFQC+QG+P+G LRRIILTASGGAFR
Sbjct: 122 LANKETLIAGGPVVLPLVEKHGVKLLPADSEHSAIFQCLQGVPKGGLRRIILTASGGAFR 181

Query: 257 DWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIH 316
           DWPVE+LK V V DA+KHPNWSMG+KITVDSATL NKGLEVIEAHYLFG EYD I+I+IH
Sbjct: 182 DWPVEQLKFVTVEDAIKHPNWSMGRKITVDSATLMNKGLEVIEAHYLFGLEYDKIDIVIH 241

Query: 317 PQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSK 369
           PQSIIHS++E QD+SV+ QLGWPDMRLP++Y +SWPERIY     W  LDL K
Sbjct: 242 PQSIIHSLIELQDTSVLAQLGWPDMRLPLLYALSWPERIYTD---WEPLDLVK 291

Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP).

Cyanothece sp. (strain PCC 8801) (taxid: 41431)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 6

EC: 7

>sp|B8HVK1|DXR_CYAP4 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=dxr PE=3 SV=1

 Score =  434 bits (1117), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 205/293 (69%), Positives = 251/293 (85%), Gaps = 3/293 (1%)

Query: 77  KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
           K I++LGSTGSIGTQTLDIVA++ D+FR+V LAAG ++  L  Q+++F+PQ+VA+ +E  
Sbjct: 2   KAITLLGSTGSIGTQTLDIVAQYPDQFRIVGLAAGRSLDKLIPQIRQFRPQIVALADEQQ 61

Query: 137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
           LD++K A+A+++ +P ++AG  GV E A + DA TVVTGIVGCAGL PT+AAI+AGKDIA
Sbjct: 62  LDDLKAAIADLDPQPILVAGPAGVCEVAAYGDAKTVVTGIVGCAGLLPTIAAIKAGKDIA 121

Query: 197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFR 256
           LANKETLIAGGP VLPL  ++ +K+LPADSEHSAIFQC+QG+P G LRRI+LTASGGAFR
Sbjct: 122 LANKETLIAGGPVVLPLVEQYGVKLLPADSEHSAIFQCLQGVPAGGLRRILLTASGGAFR 181

Query: 257 DWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIH 316
           DWPV+KL +V +ADALKHPNWSMG+KITVDSATL NKGLEVIEAHYLFG +YD+IEIIIH
Sbjct: 182 DWPVDKLGQVTIADALKHPNWSMGQKITVDSATLMNKGLEVIEAHYLFGLDYDHIEIIIH 241

Query: 317 PQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSK 369
           PQSIIHS++E QD+SV+ QLGWPDMRLP++Y MSWPERI      WPRLDL K
Sbjct: 242 PQSIIHSLIEVQDTSVLAQLGWPDMRLPVLYAMSWPERIATD---WPRLDLLK 291

Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP).

Cyanothece sp. (strain PCC 7425 / ATCC 29141) (taxid: 395961)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 6

EC: 7

>sp|B2ITX3|DXR_NOSP7 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=dxr PE=3 SV=1

 Score =  434 bits (1117), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 203/293 (69%), Positives = 251/293 (85%), Gaps = 3/293 (1%)

Query: 77  KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
           K I+++GSTGSIGTQTLDIV ++ D+FR+V LAAG+N+ +LA Q+++F+P++ A+ +E  
Sbjct: 2   KAITLVGSTGSIGTQTLDIVTQYPDQFRIVGLAAGNNVEMLAAQIRQFRPKIAAICSEDK 61

Query: 137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
           L  +KEA+ +++ +P +LAGE GVIE AR+ DA TVVTGIVGCAGL PT+AAIEAGKDIA
Sbjct: 62  LPALKEAIIDLDPQPILLAGEAGVIEVARYGDAQTVVTGIVGCAGLLPTIAAIEAGKDIA 121

Query: 197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFR 256
           LANKETLIAG P VLPL  KH +K+LPADSEHSAIFQC+QG+P+  LR+I+LTASGGAFR
Sbjct: 122 LANKETLIAGAPVVLPLVEKHGVKLLPADSEHSAIFQCLQGVPKSGLRKILLTASGGAFR 181

Query: 257 DWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIH 316
           DW VE+L +V VADALKHPNWSMG+KITVDSATL NKGLEVIEAH+LFG +YDNIEI+IH
Sbjct: 182 DWDVERLADVTVADALKHPNWSMGRKITVDSATLMNKGLEVIEAHFLFGLDYDNIEIVIH 241

Query: 317 PQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSK 369
           PQSIIHS++E QD+SV+ QLGWPDMRLP++Y +SWP+RIY     W RLDL K
Sbjct: 242 PQSIIHSLIELQDTSVLAQLGWPDMRLPLLYALSWPDRIYTD---WERLDLVK 291

Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP).

Nostoc punctiforme (strain ATCC 29133 / PCC 73102) (taxid: 63737)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 6

EC: 7

>sp|Q8YP49|DXR_NOSS1 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=dxr PE=3 SV=1

 Score =  431 bits (1107), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 200/293 (68%), Positives = 250/293 (85%), Gaps = 3/293 (1%)

Query: 77  KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
           K I+++GSTGSIGTQTLDIV+++ D+FR+V LAAGSN+ +LA+Q+++F+PQ+ A+     
Sbjct: 3   KSITLVGSTGSIGTQTLDIVSQYPDQFRIVGLAAGSNVEMLAEQIRQFRPQIAAISAAEK 62

Query: 137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
           L  ++ A+ +++ +P +L GE GVIE AR+ DA TVVTGIVGCAGL PT+AAIEAGKDIA
Sbjct: 63  LPALQAAIKDLDPQPILLGGEAGVIEVARYGDAETVVTGIVGCAGLLPTIAAIEAGKDIA 122

Query: 197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFR 256
           LANKETLIAGGP VLPL  KH +K+LPADSEHSAIFQC+QG+P+G L++I+LTASGGAFR
Sbjct: 123 LANKETLIAGGPVVLPLVEKHGVKLLPADSEHSAIFQCLQGVPKGGLKKILLTASGGAFR 182

Query: 257 DWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIH 316
           DW VE+L EV V+DALKHPNWSMG+KITVDSATL NKGLEVIEAH+LFG +Y +IEI+IH
Sbjct: 183 DWDVERLAEVTVSDALKHPNWSMGRKITVDSATLMNKGLEVIEAHFLFGLDYQDIEIVIH 242

Query: 317 PQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSK 369
           PQSIIHS++E QD+SV+ QLGWPDMRLP++Y +SWPERIY     W RL+L K
Sbjct: 243 PQSIIHSLIELQDTSVLAQLGWPDMRLPLLYALSWPERIYTD---WERLNLVK 292

Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP).

Nostoc sp. (strain PCC 7120 / UTEX 2576) (taxid: 103690)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 6

EC: 7

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	369
91241600	471	1-deoxy-D-xylulose 5-phosphate reductois	0.994	0.779	0.859	0.0
225457034	471	PREDICTED: 1-deoxy-D-xylulose 5-phosphat	0.994	0.779	0.856	0.0
255540669	467	1-deoxy-D-xylulose 5-phosphate reductois	0.983	0.777	0.842	0.0
164604988	471	1-deoxy-D-xylulose-5-phosphate reductois	0.994	0.779	0.850	0.0
224119346	471	predicted protein [Populus trichocarpa]	0.986	0.772	0.838	0.0
224133538	471	predicted protein [Populus trichocarpa]	0.986	0.772	0.841	0.0
46410854	471	putative 1-deoxy-D-xylulose 5-phosphate	0.994	0.779	0.845	0.0
149944267	474	1-deoxy-D-xylulose 5-phosphate reductois	0.997	0.776	0.827	1e-180
399514684	473	1-deoxy-D-xylulose-5-phosphate reductois	0.997	0.778	0.837	1e-180
133753347	467	1-deoxy-D-xylulose 5-phosphate reductois	0.983	0.777	0.829	1e-179

>gi|91241600|gb|ABD92702.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Hevea brasiliensis] gi|94421688|gb|ABF18928.1| putative 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Hevea brasiliensis]

 Score =  654 bits (1686), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/369 (85%), Positives = 345/369 (93%), Gaps = 2/369 (0%)

Query: 1   MALNLQIPAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSAQGPPPAW 60
           MALNL  PAEIKA+SFL++T+S+H L KL GGF LKRKD   A FG+ VQCSAQ PPPAW
Sbjct: 1   MALNLLSPAEIKAISFLDSTKSSH-LTKLPGGFSLKRKDFGAA-FGKKVQCSAQPPPPAW 58

Query: 61  PGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ 120
           PGRA  +  RKTWDGPKPISV+GSTGSIGTQTLDIVAE+ DKFRVVALAAGSN+TLLADQ
Sbjct: 59  PGRAFPDLGRKTWDGPKPISVVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLADQ 118

Query: 121 VKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCA 180
           VK FKPQ+VAVRNESL+ E++EALA+VEEKPEI+ GEQGV+E ARHPDAV+VVTGIVGCA
Sbjct: 119 VKTFKPQLVAVRNESLVHELREALADVEEKPEIIPGEQGVVEVARHPDAVSVVTGIVGCA 178

Query: 181 GLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPE 240
           GLKPTVAAIEAGKDI LANKETLIAGGPFVLPLAHK+N+KILPADSEHSAIFQCIQGLP+
Sbjct: 179 GLKPTVAAIEAGKDICLANKETLIAGGPFVLPLAHKYNVKILPADSEHSAIFQCIQGLPD 238

Query: 241 GALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEA 300
           GALRRIILTASGGAFRDWPV+KLKEVKVADALKHPNW+MGKKITVDSATLFNKGLEVIEA
Sbjct: 239 GALRRIILTASGGAFRDWPVDKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEA 298

Query: 301 HYLFGAEYDNIEIIIHPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSEL 360
           HYLFGAEYDNIEI+IHPQSIIHSMVETQDSSV+ QLGWPDMRLPI+YTMSWP+RIYCSE+
Sbjct: 299 HYLFGAEYDNIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPDRIYCSEI 358

Query: 361 TWPRLDLSK 369
           TWPRLDL K
Sbjct: 359 TWPRLDLCK 367

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225457034|ref|XP_002282761.1| PREDICTED: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic [Vitis vinifera] gi|297733784|emb|CBI15031.3| unnamed protein product [Vitis vinifera]

 Score =  650 bits (1676), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/369 (85%), Positives = 344/369 (93%), Gaps = 2/369 (0%)

Query: 1   MALNLQIPAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSAQGPPPAW 60
           MALNL  PAEIK +SFL++T+S  RLPKL GGF LKRKD   ATFGR V CSAQ PPPAW
Sbjct: 1   MALNLLPPAEIKLISFLDSTKST-RLPKLPGGFVLKRKDYG-ATFGRRVNCSAQPPPPAW 58

Query: 61  PGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ 120
           PGRAV E  RKTWDGPKP+SV+GSTGSIGTQTLDIVAE+ DKFR+VALAAGSN+TLLADQ
Sbjct: 59  PGRAVPELGRKTWDGPKPLSVVGSTGSIGTQTLDIVAENPDKFRIVALAAGSNVTLLADQ 118

Query: 121 VKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCA 180
           VK FKPQ+VAVRNE+L++E+KEALA+ E KPEI+ GEQGVIE ARHP+AVTVVTGIVGCA
Sbjct: 119 VKTFKPQLVAVRNEALVNELKEALADCEHKPEIIPGEQGVIEVARHPEAVTVVTGIVGCA 178

Query: 181 GLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPE 240
           GLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHN+KILPADSEHSAIFQCIQGLPE
Sbjct: 179 GLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNVKILPADSEHSAIFQCIQGLPE 238

Query: 241 GALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEA 300
           GALRRI+LTASGGAFRDWPV+KLKE KV+DALKHPNW+MGKKITVDSATLFNKGLEVIEA
Sbjct: 239 GALRRILLTASGGAFRDWPVDKLKEAKVSDALKHPNWNMGKKITVDSATLFNKGLEVIEA 298

Query: 301 HYLFGAEYDNIEIIIHPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSEL 360
           HYLFGAEYD+IEIIIHPQSIIHSMVETQDSSV+ QLGWPDMRLPI+YT+SWP+RIYCSE+
Sbjct: 299 HYLFGAEYDDIEIIIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTLSWPDRIYCSEI 358

Query: 361 TWPRLDLSK 369
           TWPRLDL K
Sbjct: 359 TWPRLDLCK 367

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255540669|ref|XP_002511399.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor, putative [Ricinus communis] gi|223550514|gb|EEF52001.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor, putative [Ricinus communis]

 Score =  650 bits (1676), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/369 (84%), Positives = 346/369 (93%), Gaps = 6/369 (1%)

Query: 1   MALNLQIPAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSAQGPPPAW 60
           MALNL  PAE+K++SFL++TRS+ +LPKL G F LKRK+     FGR VQCSAQ PPPAW
Sbjct: 1   MALNLLSPAELKSVSFLDSTRSS-QLPKLPGSFSLKRKE-----FGRKVQCSAQAPPPAW 54

Query: 61  PGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ 120
           PGRAV E  RKTWDGPKPIS++GSTGSIGTQTLDIVAE+ DKFRVVALAAGSN+TLLADQ
Sbjct: 55  PGRAVAEPGRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLADQ 114

Query: 121 VKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCA 180
           VK FKPQ+V+VR+ESL+DE+KEALA+V+EKPEI+ GEQG++E ARHPDAV+VVTGIVGCA
Sbjct: 115 VKTFKPQLVSVRDESLVDELKEALADVDEKPEIIPGEQGIVEVARHPDAVSVVTGIVGCA 174

Query: 181 GLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPE 240
           GLKPTVAAIEAGKDI LANKETLIAGGPFVLPLAHK+N+KILPADSEHSAIFQCIQGLPE
Sbjct: 175 GLKPTVAAIEAGKDICLANKETLIAGGPFVLPLAHKYNVKILPADSEHSAIFQCIQGLPE 234

Query: 241 GALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEA 300
           GALRRIILTASGGAFRDWPVEKLK+VKVADALKHPNW+MGKKITVDSATLFNKGLEVIEA
Sbjct: 235 GALRRIILTASGGAFRDWPVEKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEA 294

Query: 301 HYLFGAEYDNIEIIIHPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSEL 360
           HYLFGA+YDNIEI+IHPQSIIHSMVET+DSSV+ QLGWPDMR+PI+YTMSWP+RIYCSE+
Sbjct: 295 HYLFGADYDNIEIVIHPQSIIHSMVETEDSSVLAQLGWPDMRIPILYTMSWPDRIYCSEI 354

Query: 361 TWPRLDLSK 369
           TWPRLDL K
Sbjct: 355 TWPRLDLCK 363

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|164604988|dbj|BAF98290.1| 1-deoxy-D-xylulose-5-phosphate reductoisomerase [Hevea brasiliensis]

 Score =  646 bits (1667), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/369 (85%), Positives = 342/369 (92%), Gaps = 2/369 (0%)

Query: 1   MALNLQIPAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSAQGPPPAW 60
           MALNL  PAEIKA+SFL++T+S+H L KL G F L RKD   A FG+ VQCSAQ PPPAW
Sbjct: 1   MALNLLSPAEIKAISFLDSTKSSH-LTKLPGSFSLNRKDFGAA-FGKKVQCSAQPPPPAW 58

Query: 61  PGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ 120
            GRA  +  RKTWDGPKPISV+GSTGSIGTQTLDIVAE+ DKFRVVALAAGSN+TLLADQ
Sbjct: 59  TGRAFPDLGRKTWDGPKPISVVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLADQ 118

Query: 121 VKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCA 180
           VK FKPQ+VAVRNESL+ E++EALA+VEEKPEI+ GEQGV+E ARHPDAV+VVTGIVGCA
Sbjct: 119 VKTFKPQLVAVRNESLVHELREALADVEEKPEIIPGEQGVVEVARHPDAVSVVTGIVGCA 178

Query: 181 GLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPE 240
           GLKPTVAAIEAGKDI LANKETLIAGGPFVLPLAHK+N+KILPADSEHSAIFQCIQGLP+
Sbjct: 179 GLKPTVAAIEAGKDICLANKETLIAGGPFVLPLAHKYNVKILPADSEHSAIFQCIQGLPD 238

Query: 241 GALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEA 300
           GALRRIILTASGGAFRDWPV+KLKEVKVADALKHPNW+MGKKITVDSATLFNKGLEVIEA
Sbjct: 239 GALRRIILTASGGAFRDWPVDKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEA 298

Query: 301 HYLFGAEYDNIEIIIHPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSEL 360
           HYLFGAEYDNIEI+IHPQSIIHSMVETQDSSV+ QLGWPDMRLPI+YTMSWP+RIYCSE+
Sbjct: 299 HYLFGAEYDNIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPDRIYCSEI 358

Query: 361 TWPRLDLSK 369
           TWPRLDL K
Sbjct: 359 TWPRLDLCK 367

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224119346|ref|XP_002318048.1| predicted protein [Populus trichocarpa] gi|222858721|gb|EEE96268.1| predicted protein [Populus trichocarpa]

 Score =  645 bits (1664), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/372 (83%), Positives = 343/372 (92%), Gaps = 8/372 (2%)

Query: 1   MALNLQIPAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSAQG---PP 57
           MALN+  PAEIKA+SFL++T+SN RLPKL GG  LKRKD      GR +QCS Q    PP
Sbjct: 1   MALNILSPAEIKAISFLDSTKSN-RLPKLQGGLSLKRKDCG----GRRIQCSVQNQNQPP 55

Query: 58  PAWPGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLL 117
           PAWPGRA  E  RKTWDGPKPIS++GSTGSIGTQTLDIVAE+ DKF+VVALAAGSN+TLL
Sbjct: 56  PAWPGRACPEPGRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFKVVALAAGSNVTLL 115

Query: 118 ADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIV 177
           ADQV+ FKPQ++AVRNESL+DEIKEALA+VEEKPEI+ GEQGV+E ARHPDAV+VVTGIV
Sbjct: 116 ADQVRTFKPQLIAVRNESLVDEIKEALADVEEKPEIIPGEQGVVEVARHPDAVSVVTGIV 175

Query: 178 GCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 237
           GCAGLKPTVAAIEAGKDI LANKETLIAGGPFVLPLAHK+N+KILPADSEHSAIFQCIQG
Sbjct: 176 GCAGLKPTVAAIEAGKDICLANKETLIAGGPFVLPLAHKYNVKILPADSEHSAIFQCIQG 235

Query: 238 LPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEV 297
           LPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNW+MGKKITVDSATLFNKGLEV
Sbjct: 236 LPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEV 295

Query: 298 IEAHYLFGAEYDNIEIIIHPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYC 357
           IEAHYLFGA+YDNI+I+IHPQSIIHSM+ETQDSSV+ QLGWPDMRLPI+YTMSWP+R+YC
Sbjct: 296 IEAHYLFGADYDNIDIVIHPQSIIHSMIETQDSSVLAQLGWPDMRLPILYTMSWPDRVYC 355

Query: 358 SELTWPRLDLSK 369
           SE+TWPRLDL K
Sbjct: 356 SEITWPRLDLCK 367

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224133538|ref|XP_002321599.1| predicted protein [Populus trichocarpa] gi|222868595|gb|EEF05726.1| predicted protein [Populus trichocarpa]

 Score =  643 bits (1658), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/372 (84%), Positives = 340/372 (91%), Gaps = 8/372 (2%)

Query: 1   MALNLQIPAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSAQG---PP 57
           MALN   PAEIKA+SFL++T+SNH +PKL G   LKRKD      GR +QCS Q    PP
Sbjct: 1   MALNFLSPAEIKAISFLDSTKSNH-IPKLPGRLGLKRKD----CRGRRIQCSVQNQNQPP 55

Query: 58  PAWPGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLL 117
           PAWPGRA  E  RKTWDGPKPIS++GSTGSIGTQTLDIV E+ DKF VVALAAGSN+TLL
Sbjct: 56  PAWPGRAFPEPGRKTWDGPKPISIVGSTGSIGTQTLDIVTENPDKFTVVALAAGSNVTLL 115

Query: 118 ADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIV 177
           ADQV+RFKPQ+VAVRNESL+DE+KEALA+VEEKPEI+ GEQGVIE ARHPDAV+VVTGIV
Sbjct: 116 ADQVRRFKPQLVAVRNESLVDELKEALADVEEKPEIIPGEQGVIEVARHPDAVSVVTGIV 175

Query: 178 GCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 237
           GCAGLKPTVAAIEAGKDI LANKETLIAGGPFVLPLAHKHN+KILPADSEHSAIFQCIQG
Sbjct: 176 GCAGLKPTVAAIEAGKDICLANKETLIAGGPFVLPLAHKHNVKILPADSEHSAIFQCIQG 235

Query: 238 LPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEV 297
           LPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEV
Sbjct: 236 LPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEV 295

Query: 298 IEAHYLFGAEYDNIEIIIHPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYC 357
           IEAHYLFGA+YDNI+I+IHPQSIIHSM+ETQDSSV+ QLGWPDMRLPI+YT+SWPER+YC
Sbjct: 296 IEAHYLFGADYDNIDIVIHPQSIIHSMIETQDSSVLAQLGWPDMRLPILYTLSWPERVYC 355

Query: 358 SELTWPRLDLSK 369
           SE+TWPRLDL K
Sbjct: 356 SEITWPRLDLCK 367

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|46410854|gb|AAS94121.1| putative 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Hevea brasiliensis]

 Score =  642 bits (1655), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/369 (84%), Positives = 340/369 (92%), Gaps = 2/369 (0%)

Query: 1   MALNLQIPAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSAQGPPPAW 60
           M LNL  PAEIKA+SFL++T+SNH LPK  G   LKRKD   A FGR VQCSAQ PPPAW
Sbjct: 1   MELNLLSPAEIKAISFLDSTKSNH-LPKFPGVISLKRKDFGAA-FGRKVQCSAQPPPPAW 58

Query: 61  PGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ 120
           PGRA  E  RKTWDGPKPISV+GSTGSIGTQTLDIVAE+  KFRVVALAAGSN+TLLADQ
Sbjct: 59  PGRAFPEPGRKTWDGPKPISVVGSTGSIGTQTLDIVAENPGKFRVVALAAGSNVTLLADQ 118

Query: 121 VKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCA 180
           VK FKPQ+VAVRNESL DE+K+ALA++EEKPEI+ GE+GV+E ARHPDAV+VVTGIVGCA
Sbjct: 119 VKTFKPQLVAVRNESLADELKDALADLEEKPEIIPGEEGVVEVARHPDAVSVVTGIVGCA 178

Query: 181 GLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPE 240
           GLKPTVAAIEAGKDI LANKETLIAGGPFVLPLAHK+N+KILPADSEHSA+FQCIQGLP+
Sbjct: 179 GLKPTVAAIEAGKDICLANKETLIAGGPFVLPLAHKYNVKILPADSEHSAVFQCIQGLPD 238

Query: 241 GALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEA 300
           GALRRIILTASGGAFRDWPV++LKEVKVADALKHPNW+MGKKITVDSATLFNKGLEVIEA
Sbjct: 239 GALRRIILTASGGAFRDWPVDRLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEA 298

Query: 301 HYLFGAEYDNIEIIIHPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSEL 360
           HYLFGA+YDNIEI+IHPQSIIHSMVETQDSSV+ QLGWPDMRLPI+ TMSWPERIYCSE+
Sbjct: 299 HYLFGADYDNIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILCTMSWPERIYCSEI 358

Query: 361 TWPRLDLSK 369
           TWPRLDL K
Sbjct: 359 TWPRLDLCK 367

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|149944267|gb|AAY87151.2| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Rauvolfia verticillata]

 Score =  637 bits (1643), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 307/371 (82%), Positives = 339/371 (91%), Gaps = 3/371 (0%)

Query: 1   MALNLQIPAEIKALSFLETTRSNHRLP--KLSGGFPLKRKDNATATFGRIVQCSAQGPPP 58
           MALNL  P EIK +SFL++++SN+ L   KL GGF  K+KD   AT G+ +QCS Q PPP
Sbjct: 1   MALNLLSPTEIKTISFLDSSKSNYNLNLLKLQGGFAFKKKD-CGATVGKKIQCSVQPPPP 59

Query: 59  AWPGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLA 118
           AWPGRAV E   KTW+G KPIS++GSTGSIGTQTLDIVAE+ DKFRVVALAAGSN+TLLA
Sbjct: 60  AWPGRAVAEPGYKTWEGQKPISIVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLA 119

Query: 119 DQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVG 178
           DQVK FKPQ+VAVRNESL+DE+KEAL++VE+KPEI+ GEQGV+E ARHPDAVTVVTGIVG
Sbjct: 120 DQVKTFKPQLVAVRNESLVDELKEALSDVEDKPEIIPGEQGVVEVARHPDAVTVVTGIVG 179

Query: 179 CAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGL 238
           CAGLKPTVAAIEAGK+I LANKETLIAGGPFVLPLAHKH +KILPADSEHSAIFQCIQGL
Sbjct: 180 CAGLKPTVAAIEAGKNIVLANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGL 239

Query: 239 PEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVI 298
           PEGALRR+ILTASGGAFRDWPVEKLKEVKVADALKHPNW+MGKKITVDSATLFNKGLEVI
Sbjct: 240 PEGALRRVILTASGGAFRDWPVEKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVI 299

Query: 299 EAHYLFGAEYDNIEIIIHPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCS 358
           EAHYLFGAEYDNI+I+IHPQSIIHSMVETQDSSV+ QLGWPDMRLPI+YT SWP+RIYCS
Sbjct: 300 EAHYLFGAEYDNIDIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTPSWPDRIYCS 359

Query: 359 ELTWPRLDLSK 369
           E+TWPRLDL K
Sbjct: 360 EITWPRLDLCK 370

Source: Rauvolfia verticillata

Species: Rauvolfia verticillata

Genus: Rauvolfia

Family: Apocynaceae

Order: Gentianales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|399514684|gb|AFP43697.1| 1-deoxy-D-xylulose-5-phosphate reductoisomerase [Eriobotrya japonica]

 Score =  635 bits (1638), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 310/370 (83%), Positives = 342/370 (92%), Gaps = 2/370 (0%)

Query: 1   MALNLQIPAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSAQGPPPAW 60
           MALNL  PAEIKA+SFL++T+S+  LPKL GGF L+R+D  T   GR VQCSA   PP  
Sbjct: 1   MALNLLSPAEIKAISFLDSTKSSRYLPKLPGGFALRRRDCGT-VIGRRVQCSAAQAPPPA 59

Query: 61  P-GRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD 119
             GRAV ET R+TWDGPKPIS++GSTGSIGTQTLDIVAE+ DKFR+VALAAGSN+TLL D
Sbjct: 60  WPGRAVAETSRRTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRIVALAAGSNVTLLVD 119

Query: 120 QVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGC 179
           QV+RFKPQ+VAV NESL++E+KEALA+++EKPEI+ GEQGV+E ARHPDAVTVVTGIVGC
Sbjct: 120 QVRRFKPQLVAVGNESLVNELKEALADLDEKPEIIPGEQGVVEVARHPDAVTVVTGIVGC 179

Query: 180 AGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLP 239
           AGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHN+KILPADSEHSAIFQCIQGLP
Sbjct: 180 AGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNVKILPADSEHSAIFQCIQGLP 239

Query: 240 EGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE 299
           EGALRRIILTASGG+FRDWPVEKLKEVKVADALKHPNW+MGKKITVDSATLFNKGLEVIE
Sbjct: 240 EGALRRIILTASGGSFRDWPVEKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIE 299

Query: 300 AHYLFGAEYDNIEIIIHPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSE 359
           AHYLFGAEYD+IEI+IHPQSIIHSM+ETQDSSV+ QLGWPDMRLPI+YTMSWPERIYCSE
Sbjct: 300 AHYLFGAEYDDIEIVIHPQSIIHSMIETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSE 359

Query: 360 LTWPRLDLSK 369
           +TWPRLDL K
Sbjct: 360 VTWPRLDLCK 369

Source: Eriobotrya japonica

Species: Eriobotrya japonica

Genus: Eriobotrya

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|133753347|gb|ABO38177.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Croton stellatopilosus]

 Score =  635 bits (1637), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 307/370 (82%), Positives = 341/370 (92%), Gaps = 7/370 (1%)

Query: 1   MALNLQIPAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSAQGPPP-A 59
           MALNL  PAEIK++SFL++ +SN +LPKL+G F LKRKD      GR VQCS Q PPP A
Sbjct: 1   MALNLLSPAEIKSISFLDSAKSN-QLPKLTGSFSLKRKD-----LGRKVQCSVQSPPPPA 54

Query: 60  WPGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD 119
           WPG A  E  RKTWDGPKPIS++GSTGSIGTQTLDIVAE+ +KF+VVALAAGSN+TLLAD
Sbjct: 55  WPGTAFPEPGRKTWDGPKPISIVGSTGSIGTQTLDIVAENPEKFKVVALAAGSNVTLLAD 114

Query: 120 QVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGC 179
           QVK FKPQ+VAVRNESL+DE+KEALA++EEKPEI+ GE+GV+E ARHPDA +VVTGIVGC
Sbjct: 115 QVKTFKPQLVAVRNESLVDELKEALADLEEKPEIIPGEEGVVEVARHPDAASVVTGIVGC 174

Query: 180 AGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLP 239
           AGL+PTVAAIEAGKDI LANKETLIAGGPFVLPLA+K+N+KILPADSEHSAIFQCIQGLP
Sbjct: 175 AGLRPTVAAIEAGKDICLANKETLIAGGPFVLPLANKYNVKILPADSEHSAIFQCIQGLP 234

Query: 240 EGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE 299
           EGALRRIILTASGGAFRDWPVEKLK+VKVADALKHPNW+MGKKITVDSATLFNKGLEVIE
Sbjct: 235 EGALRRIILTASGGAFRDWPVEKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIE 294

Query: 300 AHYLFGAEYDNIEIIIHPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSE 359
           AHYLFGA+YDNIEI+IHPQSIIHSMVETQDSSV+ QLGWPDMRLPI+YTMSWP+RIYCSE
Sbjct: 295 AHYLFGADYDNIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPDRIYCSE 354

Query: 360 LTWPRLDLSK 369
           +TWPRLDL K
Sbjct: 355 ITWPRLDLCK 364

Source: Croton stellatopilosus

Species: Croton stellatopilosus

Genus: Croton

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	369
TIGR_CMR|BA_3959	380	BA_3959 "1-deoxy-D-xylulose 5-	0.756	0.734	0.512	2e-72
TIGR_CMR|GSU_1915	386	GSU_1915 "1-deoxy-D-xylulose 5	0.750	0.717	0.512	1.6e-70
TIGR_CMR|BA_3409	385	BA_3409 "1-deoxy-D-xylulose 5-	0.747	0.716	0.473	5.8e-66
TIGR_CMR|SPO_1667	395	SPO_1667 "1-deoxy-D-xylulose 5	0.775	0.724	0.431	4.5e-59
UNIPROTKB|P45568	398	dxr "Dxr" [Escherichia coli K-	0.756	0.701	0.442	2.2e-57
TIGR_CMR|CHY_1778	384	CHY_1778 "1-deoxy-D-xylulose 5	0.769	0.739	0.456	7.5e-57
TIGR_CMR|CPS_1559	411	CPS_1559 "1-deoxy-D-xylulose 5	0.750	0.673	0.431	6.1e-55
UNIPROTKB|Q9KPV8	402	dxr "1-deoxy-D-xylulose 5-phos	0.785	0.721	0.402	8.9e-54
TIGR_CMR|VC_2254	402	VC_2254 "1-deoxy-D-xylulose 5-	0.785	0.721	0.402	8.9e-54
TIGR_CMR|DET_0371	377	DET_0371 "1-deoxy-D-xylulose 5	0.742	0.726	0.437	1.3e-52

TIGR_CMR|BA_3959 BA_3959 "1-deoxy-D-xylulose 5-phosphate reductoisomerase" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 732 (262.7 bits), Expect = 2.0e-72, P = 2.0e-72
 Identities = 145/283 (51%), Positives = 192/283 (67%)

Query:    77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
             K IS+LG++GSIGTQTLD++  H D+FR+VA + G NI      ++ F PQ+V+V+ E  
Sbjct:     2 KNISLLGASGSIGTQTLDVLRSHPDQFRLVAFSVGKNIDYAVKVIQEFSPQIVSVQREE- 60

Query:   137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
              D +K  L  V    +I+ G +G++E A HPDA  VV  +VG  GL PT+ AIEA K I 
Sbjct:    61 -DVLK--LQAVSGNTKIVYGSEGLLEVALHPDAEIVVNAVVGSVGLLPTLRAIEAKKTIG 117

Query:   197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFR 256
             +ANKETL+  G  V+  A KHN+ +LP DSEHSAIFQC+ G  E  + R+I+TASGG+FR
Sbjct:   118 IANKETLVTAGHLVMEAARKHNVSLLPVDSEHSAIFQCLNGENEKRISRLIITASGGSFR 177

Query:   257 DWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNXXXXXX 316
             D   ++L  V V DAL+HPNWSMG KIT+DSAT+ NKGLEVIEAH+LFG  Y+       
Sbjct:   178 DKTRDELHHVTVEDALRHPNWSMGSKITIDSATMMNKGLEVIEAHWLFGIPYEQIDVVLH 237

Query:   317 XXXXXXXMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSE 359
                    MVE +D SV+ QLG PDMR+PI Y +++P+R+  S+
Sbjct:   238 KESIIHSMVEFEDRSVMAQLGSPDMRVPIQYALTYPDRLPLSD 280

GO:0008299 "isoprenoid biosynthetic process" evidence=ISS

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=ISS

TIGR_CMR|GSU_1915 GSU_1915 "1-deoxy-D-xylulose 5-phosphate reductoisomerase" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 714 (256.4 bits), Expect = 1.6e-70, P = 1.6e-70
 Identities = 143/279 (51%), Positives = 189/279 (67%)

Query:    77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
             K I++LGSTGSIG  TL++V+ H D+FRVVAL AG+N+ +L  Q++ F+PQ+V+V +E L
Sbjct:     2 KNITILGSTGSIGVSTLEVVSAHPDRFRVVALTAGNNLEMLRQQIETFRPQMVSVLSEKL 61

Query:   137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
               E+  +L     KPEI  G +G+I AA   DA  VV  IVG AGL PT AAI AGKD+A
Sbjct:    62 AVELDRSLPGY--KPEIHYGVEGLIAAATAGDAHMVVAAIVGAAGLVPTAAAIRAGKDVA 119

Query:   197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFR 256
             LANKETL+  G  ++ L    N+++ P DSEHSA+FQ ++G     + RIILTASGG F 
Sbjct:   120 LANKETLVTAGRLIMDLVRDKNVRLYPVDSEHSAVFQSMEGQSRKDVLRIILTASGGPFL 179

Query:   257 DWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNXXXXXX 316
             + P+++L  V + DAL HPNWSMG+KIT+DSAT+ NKGLEVIEA +LF    +       
Sbjct:   180 NLPLDQLSRVSIDDALNHPNWSMGRKITIDSATMMNKGLEVIEARWLFDTPAERIDVNIH 239

Query:   317 XXXXXXXMVETQDSSVIGQLGWPDMRLPIIYTMSWPERI 355
                    MVE  D SV+ QLG PDM+ PI Y +++PER+
Sbjct:   240 PQSIIHSMVEYVDGSVMAQLGVPDMKAPIAYALTYPERV 278

GO:0008299 "isoprenoid biosynthetic process" evidence=ISS

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=ISS

TIGR_CMR|BA_3409 BA_3409 "1-deoxy-D-xylulose 5-phosphate reductoisomerase" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 671 (241.3 bits), Expect = 5.8e-66, P = 5.8e-66
 Identities = 132/279 (47%), Positives = 183/279 (65%)

Query:    77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
             K IS+LGSTGSIGT  LD+V+ H + F++V L A  NI LL  Q+K F+P++V+V  + L
Sbjct:     3 KYISILGSTGSIGTSALDVVSAHPEHFKIVGLTANYNIELLEQQIKTFQPRIVSVATKEL 62

Query:   137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
              D ++     +    +I  G  G+I  A HP++  V++ +VG +GL PT+ A++A KDIA
Sbjct:    63 ADTLR---TRISTNTKITYGTDGLIAVATHPNSNLVLSSVVGVSGLLPTIEALKAKKDIA 119

Query:   197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFR 256
             +ANKETL+A G  V  LA ++  +++P DSEHSAIFQC+ G     + ++I+TASGGAFR
Sbjct:   120 IANKETLVAAGHIVTELAKQNGCRLIPVDSEHSAIFQCLNGENNKEIDKLIVTASGGAFR 179

Query:   257 DWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNXXXXXX 316
             D   E++K ++  DALKHPNW MG K+T+DSATL NKG EV+EA +LF   Y+       
Sbjct:   180 DKTREEMKTLQAKDALKHPNWLMGAKLTIDSATLMNKGFEVMEARWLFDIPYEKINVMIH 239

Query:   317 XXXXXXXMVETQDSSVIGQLGWPDMRLPIIYTMSWPERI 355
                    +VE  D SVI QLG PDMR+PI Y   +P R+
Sbjct:   240 KESIIHSLVEFIDGSVIAQLGAPDMRMPIQYAFHYPTRL 278

GO:0008299 "isoprenoid biosynthetic process" evidence=ISS

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=ISS

TIGR_CMR|SPO_1667 SPO_1667 "1-deoxy-D-xylulose 5-phosphate reductoisomerase" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
 Identities = 126/292 (43%), Positives = 175/292 (59%)

Query:    77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
             + +S+ G+TGSIG  T+D++A   D + VVAL+ G+NI  LA   +R +  V        
Sbjct:     7 RKVSIFGATGSIGQNTIDLIARDPDAYDVVALSGGANIAQLAADARRLRADVAVTAFPER 66

Query:   137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
             L +++ ALA      E  AG   ++EA   P A  V++ IVG AGL P +AA++ G  +A
Sbjct:    67 LHDLRAALAG--SGVEAAAGPAALVEAGARP-ADWVMSAIVGAAGLAPGLAALKQGATLA 123

Query:   197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFR 256
             LANKETL+  G  VL  A +H  ++LP DSEHSA+FQ + G    A+ RI++TASGGAFR
Sbjct:   124 LANKETLVCAGALVLETARRHGARLLPVDSEHSAVFQALVGEDMEAVERIVITASGGAFR 183

Query:   257 DWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNXXXXXX 316
             DWP+E+L       A +HPNW MG++IT+DSA++FNK LEVIE    FG + D       
Sbjct:   184 DWPLERLASATAEQAAQHPNWDMGQRITIDSASMFNKALEVIETREFFGIDPDRIEVIVH 243

Query:   317 XXXXXXXMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLS 368
                    +V  +D +++  LG PDMR  I Y + WPER    +L   RLDL+
Sbjct:   244 PESMVHALVGFRDGALMAHLGAPDMRHAIGYALHWPER---RDLPVARLDLA 292

GO:0005737 "cytoplasm" evidence=ISS

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=ISS

GO:0030604 "1-deoxy-D-xylulose-5-phosphate reductoisomerase activity" evidence=ISS

UNIPROTKB|P45568 dxr "Dxr" [Escherichia coli K-12 (taxid:83333)]

 Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
 Identities = 128/289 (44%), Positives = 171/289 (59%)

Query:    77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
             K +++LGSTGSIG  TLD+V  + + FRVVAL AG N+T + +Q   F P+   + +E+ 
Sbjct:     2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEAS 61

Query:   137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
                +K  L     + E+L+G+Q   + A   D   V+  IVG AGL PT+AAI AGK I 
Sbjct:    62 AKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTIL 121

Query:   197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQC----IQ---G---LPEGALRRI 246
             LANKE+L+  G   +    +   ++LP DSEH+AIFQ     IQ   G   L +  +  I
Sbjct:   122 LANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSI 181

Query:   247 ILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGA 306
             +LT SGG FR+ P+  L  +    A +HPNWSMG+KI+VDSAT+ NKGLE IEA +LF A
Sbjct:   182 LLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFNA 241

Query:   307 EYDNXXXXXXXXXXXXXMVETQDSSVIGQLGWPDMRLPIIYTMSWPERI 355
                              MV  QD SV+ QLG PDMR PI +TM+WP R+
Sbjct:   242 SASQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDMRTPIAHTMAWPNRV 290

GO:0070402 "NADPH binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0008299 "isoprenoid biosynthetic process" evidence=IEA

GO:0030604 "1-deoxy-D-xylulose-5-phosphate reductoisomerase activity" evidence=IEA;IDA

GO:0006744 "ubiquinone biosynthetic process" evidence=IDA

TIGR_CMR|CHY_1778 CHY_1778 "1-deoxy-D-xylulose 5-phosphate reductoisomerase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
 Identities = 135/296 (45%), Positives = 183/296 (61%)

Query:    77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
             K + +LGSTGSIG Q+L+++    DKF VVALAA  N  LL +Q  RFK     V++  L
Sbjct:     2 KKLVILGSTGSIGRQSLEVIEFFPDKFSVVALAAAKNGKLLLEQCLRFK-----VKHAFL 56

Query:   137 LDEIKEALANVEEKPE-IL--AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGK 193
              DE        E K   IL   G + ++  A  P    ++T I G   L PT+ A++AGK
Sbjct:    57 ADEESYKTYYQEFKNHGILLTTGSKELLNLALLPGVDGIITAIPGTICLLPTIEALKAGK 116

Query:   194 DIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGG 253
              I LANKET++A G  + PL  K    +LP DSEHSAIFQ ++G     ++++++TASGG
Sbjct:   117 IIYLANKETMVAAGEIITPLM-KLGENLLPVDSEHSAIFQALRGEKLAWVKKLLITASGG 175

Query:   254 AFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNXXX 313
              FR++ +E+LK V VA+ALKHP W MG KIT+DSATL NKGLE+IEAH+LF   Y+    
Sbjct:   176 PFREYTLEQLKNVTVAEALKHPRWKMGNKITIDSATLMNKGLEIIEAHFLFQIPYEKIEP 235

Query:   314 XXXXXXXXXXMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSK 369
                       +VE  D SV+ QLG PDMR PI Y +++PER + + L  P L+L++
Sbjct:   236 VIHPQSVIHSLVEFYDGSVLAQLGLPDMRHPIQYALTYPER-FPNNL--PGLNLTE 288

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=ISS

GO:0030604 "1-deoxy-D-xylulose-5-phosphate reductoisomerase activity" evidence=ISS

TIGR_CMR|CPS_1559 CPS_1559 "1-deoxy-D-xylulose 5-phosphate reductoisomerase" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
 Identities = 126/292 (43%), Positives = 180/292 (61%)

Query:    77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQ-VVAVRNE- 134
             + + +LGSTGSIG  TLD+V  H ++F+V++LAA +++ ++ +Q   FKPQ VV V +E 
Sbjct:     4 RQLCILGSTGSIGCSTLDVVRLHPERFQVISLAAYTSVDVIFEQCIEFKPQQVVLVSSEH 63

Query:   135 -SLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGK 193
              +LL + K   ANV     +L+GEQ +I+ A   ++ TV+  IVG +GL PT+AA+ AGK
Sbjct:    64 AALLTQ-KLNDANVSNIT-VLSGEQALIDIAECQNSDTVMASIVGASGLLPTLAAVNAGK 121

Query:   194 DIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG----------LPEGAL 243
              + LANKE L+  G   +        ++LP DSEH+AIFQC+            L    +
Sbjct:   122 RVLLANKEALVTSGAIFMAAVKASGAELLPIDSEHNAIFQCLPSQQQAEIGECQLLANGI 181

Query:   244 RRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYL 303
              +I+LT SGG FR   ++ L+ V  + A  HPNW MG+KI+VDSAT+ NKGLE IEA +L
Sbjct:   182 SKILLTGSGGPFRTRAIDTLESVTPSQACAHPNWDMGRKISVDSATMMNKGLEFIEAKWL 241

Query:   304 FGAEYDNXXXXXXXXXXXXXMVETQDSSVIGQLGWPDMRLPIIYTMSWPERI 355
             F  E ++             MV+ +D SVI Q+G PDMR PI + +S+PERI
Sbjct:   242 FNVEAEDIQVVLHPQSTIHSMVQYKDGSVIAQMGNPDMRTPIAHALSFPERI 293

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=ISS

GO:0030604 "1-deoxy-D-xylulose-5-phosphate reductoisomerase activity" evidence=ISS

UNIPROTKB|Q9KPV8 dxr "1-deoxy-D-xylulose 5-phosphate reductoisomerase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
 Identities = 122/303 (40%), Positives = 174/303 (57%)

Query:    77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
             + +++LG+TGSIG  TL ++A++  +F +VAL AG N+  +    ++++P+   +   S 
Sbjct:     2 RKLTILGATGSIGASTLKVIAQNPQQFSIVALVAGVNVAKMYQLCQQWRPKYAVMATASA 61

Query:   137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
               E++  L N     E+L GE+ + + A   D  TV+  IVG AGL PT+AA++AGK + 
Sbjct:    62 ASELQGLLKNQAMATEVLYGEEAMCQVAALDDVDTVMAAIVGAAGLLPTMAAVKAGKRVL 121

Query:   197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQC----IQ---G---LPEGALRRI 246
             LANKE L+  G   +    +   +++P DSEH+AIFQC    IQ   G   L +  +  I
Sbjct:   122 LANKEALVMSGQLFIDAVAQSGAELMPVDSEHNAIFQCLPTEIQTQLGRCDLSQHGIDHI 181

Query:   247 ILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGA 306
             +LT SGG FR   +  L  V    A+ HPNWSMG KI+VDSAT+ NKGLE IEA +LF  
Sbjct:   182 LLTGSGGPFRYSDLATLDSVTPEQAIAHPNWSMGPKISVDSATMMNKGLEYIEAKWLFNT 241

Query:   307 EYDNXXXXXXXXXXXXXMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLD 366
               +              MV+ QD SVI QLG PDM  PI Y M++PER+       P LD
Sbjct:   242 SREQLKVLIHPQSVIHSMVQYQDGSVIAQLGEPDMATPISYAMAYPERVTAGV---PALD 298

Query:   367 LSK 369
              ++
Sbjct:   299 FTR 301

GO:0008299 "isoprenoid biosynthetic process" evidence=ISS

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=ISS

TIGR_CMR|VC_2254 VC_2254 "1-deoxy-D-xylulose 5-phosphate reductoisomerase" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
 Identities = 122/303 (40%), Positives = 174/303 (57%)

Query:    77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
             + +++LG+TGSIG  TL ++A++  +F +VAL AG N+  +    ++++P+   +   S 
Sbjct:     2 RKLTILGATGSIGASTLKVIAQNPQQFSIVALVAGVNVAKMYQLCQQWRPKYAVMATASA 61

Query:   137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
               E++  L N     E+L GE+ + + A   D  TV+  IVG AGL PT+AA++AGK + 
Sbjct:    62 ASELQGLLKNQAMATEVLYGEEAMCQVAALDDVDTVMAAIVGAAGLLPTMAAVKAGKRVL 121

Query:   197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQC----IQ---G---LPEGALRRI 246
             LANKE L+  G   +    +   +++P DSEH+AIFQC    IQ   G   L +  +  I
Sbjct:   122 LANKEALVMSGQLFIDAVAQSGAELMPVDSEHNAIFQCLPTEIQTQLGRCDLSQHGIDHI 181

Query:   247 ILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGA 306
             +LT SGG FR   +  L  V    A+ HPNWSMG KI+VDSAT+ NKGLE IEA +LF  
Sbjct:   182 LLTGSGGPFRYSDLATLDSVTPEQAIAHPNWSMGPKISVDSATMMNKGLEYIEAKWLFNT 241

Query:   307 EYDNXXXXXXXXXXXXXMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLD 366
               +              MV+ QD SVI QLG PDM  PI Y M++PER+       P LD
Sbjct:   242 SREQLKVLIHPQSVIHSMVQYQDGSVIAQLGEPDMATPISYAMAYPERVTAGV---PALD 298

Query:   367 LSK 369
              ++
Sbjct:   299 FTR 301

GO:0008299 "isoprenoid biosynthetic process" evidence=ISS

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=ISS

TIGR_CMR|DET_0371 DET_0371 "1-deoxy-D-xylulose 5-phosphate reductoisomerase" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
 Identities = 127/290 (43%), Positives = 171/290 (58%)

Query:    77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
             K I +LGSTGSIG QTL+++    D+F+V+ LA G+N  LL +Q ++F+P+ +  +N   
Sbjct:     6 KNIVILGSTGSIGRQTLEVIHSLPDRFKVLGLAGGTNANLLKEQTEQFRPKYIYCQN--- 62

Query:   137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
               +     A        +  E    E A  P+A  VV    G AGL+P +AA  AGK IA
Sbjct:    63 CHDTNACTAR------FIPME----EMAALPEADIVVVATPGSAGLQPVLAAARAGKVIA 112

Query:   197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFR 256
             LANKE+L++ G  V   A ++  KILP DSEHSAI+QC+ G      R IILTASGG FR
Sbjct:   113 LANKESLVSAGEIVTATAQENRAKILPVDSEHSAIWQCLSGEVTPPAR-IILTASGGPFR 171

Query:   257 DWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNXXXXXX 316
                 +++ +V    ALKHP+W MG K+T+DSA+L NKGLE+IEA +LF     N      
Sbjct:   172 SLTKDEIAKVTPEQALKHPSWKMGTKVTIDSASLMNKGLEIIEARWLFDMPVRNIQVVIH 231

Query:   317 XXXXXXXMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLD 366
                    MVE  D S+  QL  PDMR PI   +++PER+  + LT PRL+
Sbjct:   232 PQSIIHSMVEFADGSLKAQLSRPDMRFPIQCALTYPERL--TNLTLPRLN 279

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=ISS

GO:0030604 "1-deoxy-D-xylulose-5-phosphate reductoisomerase activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
B7HLF4	DXR_BACC7	1, ., 1, ., 1, ., 2, 6, 7	0.5371	0.7560	0.7342	yes	no
Q8DK30	DXR_THEEB	1, ., 1, ., 1, ., 2, 6, 7	0.6894	0.7859	0.7021	yes	no
Q46JT6	DXR_PROMT	1, ., 1, ., 1, ., 2, 6, 7	0.5980	0.7859	0.7038	yes	no
Q732P8	DXR_BACC1	1, ., 1, ., 1, ., 2, 6, 7	0.5371	0.7560	0.7342	yes	no
A5D2U3	DXR_PELTS	1, ., 1, ., 1, ., 2, 6, 7	0.5342	0.7804	0.7441	yes	no
Q7NID1	DXR_GLOVI	1, ., 1, ., 1, ., 2, 6, 7	0.6450	0.7859	0.7397	yes	no
B3E7B0	DXR_GEOLS	1, ., 1, ., 1, ., 2, 6, 7	0.5280	0.7886	0.7461	yes	no
A9KMX2	DXR_CLOPH	1, ., 1, ., 1, ., 2, 6, 7	0.5575	0.7452	0.7087	yes	no
Q319Z8	DXR_PROM9	1, ., 1, ., 1, ., 2, 6, 7	0.6319	0.7859	0.7107	yes	no
Q7V6J8	DXR_PROMM	1, ., 1, ., 1, ., 2, 6, 7	0.5928	0.7750	0.6941	yes	no
Q81WL4	DXR2_BACAN	1, ., 1, ., 1, ., 2, 6, 7	0.5371	0.7560	0.7342	yes	no
Q3MDL2	DXR_ANAVT	1, ., 1, ., 1, ., 2, 6, 7	0.6860	0.7859	0.7286	yes	no
Q3AZ20	DXR_SYNS9	1, ., 1, ., 1, ., 2, 6, 7	0.6109	0.7859	0.6954	yes	no
B7KAT5	DXR_CYAP7	1, ., 1, ., 1, ., 2, 6, 7	0.6996	0.7859	0.7286	yes	no
Q31N26	DXR_SYNE7	1, ., 1, ., 1, ., 2, 6, 7	0.6534	0.7859	0.7213	yes	no
B7K5G6	DXR_CYAP8	1, ., 1, ., 1, ., 2, 6, 7	0.7064	0.7859	0.7286	yes	no
B0CD21	DXR_ACAM1	1, ., 1, ., 1, ., 2, 6, 7	0.7133	0.7859	0.7231	yes	no
B3QXY0	DXR_CHLT3	1, ., 1, ., 1, ., 2, 6, 7	0.5344	0.7723	0.7364	yes	no
Q636K5	DXR2_BACCZ	1, ., 1, ., 1, ., 2, 6, 7	0.5371	0.7560	0.7342	yes	no
Q0IBN9	DXR_SYNS3	1, ., 1, ., 1, ., 2, 6, 7	0.6141	0.7859	0.6971	yes	no
A2C3T8	DXR_PROM1	1, ., 1, ., 1, ., 2, 6, 7	0.6012	0.7859	0.7038	yes	no
A2BXK2	DXR_PROM5	1, ., 1, ., 1, ., 2, 6, 7	0.6058	0.7859	0.7090	yes	no
Q8YP49	DXR_NOSS1	1, ., 1, ., 1, ., 2, 6, 7	0.6825	0.7859	0.7268	yes	no
Q2JM39	DXR_SYNJB	1, ., 1, ., 1, ., 2, 6, 7	0.6416	0.7859	0.7397	yes	no
C0ZF60	DXR_BREBN	1, ., 1, ., 1, ., 2, 6, 7	0.5358	0.7831	0.7565	yes	no
C4Z5K1	DXR_EUBE2	1, ., 1, ., 1, ., 2, 6, 7	0.5326	0.7723	0.75	yes	no
Q7V0W0	DXR_PROMP	1, ., 1, ., 1, ., 2, 6, 7	0.6105	0.7750	0.7079	yes	no
Q9XFS9	DXR_ARATH	1, ., 1, ., 1, ., 2, 6, 7	0.8074	0.9945	0.7693	yes	no
Q9XES0	DXR_MENPI	1, ., 1, ., 1, ., 2, 6, 7	0.8169	0.9783	0.7680	N/A	no
Q74BW4	DXR_GEOSL	1, ., 1, ., 1, ., 2, 6, 7	0.5483	0.7506	0.7176	yes	no
Q7U8C3	DXR_SYNPX	1, ., 1, ., 1, ., 2, 6, 7	0.6052	0.7750	0.6992	yes	no
B2ITX3	DXR_NOSP7	1, ., 1, ., 1, ., 2, 6, 7	0.6928	0.7859	0.7286	yes	no
C1EP45	DXR_BACC3	1, ., 1, ., 1, ., 2, 6, 7	0.5371	0.7560	0.7342	yes	no
Q7VB62	DXR_PROMA	1, ., 1, ., 1, ., 2, 6, 7	0.5993	0.7750	0.6941	yes	no
Q185R8	DXR_CLOD6	1, ., 1, ., 1, ., 2, 6, 7	0.5306	0.7804	0.75	yes	no
Q6HEZ4	DXR2_BACHK	1, ., 1, ., 1, ., 2, 6, 7	0.5371	0.7560	0.7342	yes	no
Q3AI71	DXR_SYNSC	1, ., 1, ., 1, ., 2, 6, 7	0.6116	0.7859	0.6987	yes	no
B9IVB0	DXR_BACCQ	1, ., 1, ., 1, ., 2, 6, 7	0.5371	0.7560	0.7342	yes	no
Q9RCT1	DXR_SYNP6	1, ., 1, ., 1, ., 2, 6, 7	0.6534	0.7859	0.7213	yes	no
B4S387	DXR_PROA2	1, ., 1, ., 1, ., 2, 6, 7	0.5494	0.7804	0.7539	yes	no
B8HVK1	DXR_CYAP4	1, ., 1, ., 1, ., 2, 6, 7	0.6996	0.7859	0.7493	yes	no
Q9KA69	DXR_BACHD	1, ., 1, ., 1, ., 2, 6, 7	0.5633	0.7560	0.7303	yes	no
B0THN7	DXR_HELMI	1, ., 1, ., 1, ., 2, 6, 7	0.5426	0.7831	0.7391	yes	no
Q8KG43	DXR_CHLTE	1, ., 1, ., 1, ., 2, 6, 7	0.5631	0.7804	0.7539	yes	no
Q819Y3	DXR2_BACCR	1, ., 1, ., 1, ., 2, 6, 7	0.5371	0.7560	0.7342	yes	no
Q2JXQ9	DXR_SYNJA	1, ., 1, ., 1, ., 2, 6, 7	0.6518	0.7859	0.7397	yes	no
Q8W250	DXR_ORYSJ	1, ., 1, ., 1, ., 2, 6, 7	0.7864	0.9972	0.7780	yes	no
B1WNP5	DXR_CYAA5	1, ., 1, ., 1, ., 2, 6, 7	0.7235	0.7859	0.7286	yes	no
B0JWW6	DXR_MICAN	1, ., 1, ., 1, ., 2, 6, 7	0.6996	0.7859	0.7435	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.976
4th Layer	1.1.1.267	0.991

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	369
PLN02696	454	PLN02696, PLN02696, 1-deoxy-D-xylulose-5-phosphate	0.0
PRK05447	385	PRK05447, PRK05447, 1-deoxy-D-xylulose 5-phosphate	0.0
COG0743	385	COG0743, Dxr, 1-deoxy-D-xylulose 5-phosphate reduc	1e-162
TIGR00243	389	TIGR00243, Dxr, 1-deoxy-D-xylulose 5-phosphate red	1e-148
PRK12464	383	PRK12464, PRK12464, 1-deoxy-D-xylulose 5-phosphate	1e-141
pfam02670	129	pfam02670, DXP_reductoisom, 1-deoxy-D-xylulose 5-p	9e-68
pfam08436	84	pfam08436, DXP_redisom_C, 1-deoxy-D-xylulose 5-pho	3e-55
pfam13288	118	pfam13288, DXPR_C, DXP reductoisomerase C-terminal	6e-09
COG0460	333	COG0460, ThrA, Homoserine dehydrogenase [Amino aci	0.001

>gnl|CDD|215374 PLN02696, PLN02696, 1-deoxy-D-xylulose-5-phosphate reductoisomerase

 Score =  682 bits (1762), Expect = 0.0
 Identities = 284/350 (81%), Positives = 316/350 (90%), Gaps = 6/350 (1%)

Query: 25  RLPKLSGGFPLKRKDNATATFGRIVQCS-----AQGPPPAWPGRAVTETFRKTWDGPKPI 79
            LPKL GGF  KR   +  + GR  +CS        PPPAWPGRAV E  RK WDGPKPI
Sbjct: 2   PLPKLPGGFTTKRSS-SRQSRGRRAKCSVAGWSQNSPPPAWPGRAVVEPGRKGWDGPKPI 60

Query: 80  SVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDE 139
           S+LGSTGSIGTQTLDIVAE+ DKF+VVALAAGSN+TLLADQV++FKP++VAVRNESL+DE
Sbjct: 61  SLLGSTGSIGTQTLDIVAENPDKFKVVALAAGSNVTLLADQVRKFKPKLVAVRNESLVDE 120

Query: 140 IKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALAN 199
           +KEALA++++KPEI+ GE+G++E ARHP+AVTVVTGIVGCAGLKPTVAAIEAGKDIALAN
Sbjct: 121 LKEALADLDDKPEIIPGEEGIVEVARHPEAVTVVTGIVGCAGLKPTVAAIEAGKDIALAN 180

Query: 200 KETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWP 259
           KETLIAGGPFVLPLA KH +KILPADSEHSAIFQCIQGLPEG LRRIILTASGGAFRDWP
Sbjct: 181 KETLIAGGPFVLPLAKKHGVKILPADSEHSAIFQCIQGLPEGGLRRIILTASGGAFRDWP 240

Query: 260 VEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIHPQS 319
           VEKLKEVKVADALKHPNWSMGKKITVDSATL NKGLEVIEAHYLFGA+YD+I+I+IHPQS
Sbjct: 241 VEKLKEVKVADALKHPNWSMGKKITVDSATLMNKGLEVIEAHYLFGADYDDIDIVIHPQS 300

Query: 320 IIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSK 369
           IIHSMVETQDSSV+ QLGWPDMRLPI+YTMSWP+R+ CSE+TWPRLDL K
Sbjct: 301 IIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPDRVPCSEITWPRLDLCK 350

Length = 454

>gnl|CDD|235472 PRK05447, PRK05447, 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

 Score =  515 bits (1328), Expect = 0.0
 Identities = 174/294 (59%), Positives = 216/294 (73%), Gaps = 5/294 (1%)

Query: 76  PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNES 135
            K I++LGSTGSIGTQTLD++  + D+FRVVAL+AG N+ LLA+Q + F+P+ V V +E 
Sbjct: 1   MKRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEE 60

Query: 136 LLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI 195
              E+KEALA      E+LAGE+G+ E A  P+A  VV  IVG AGL PT+AAI AGK I
Sbjct: 61  AAKELKEALA--AAGIEVLAGEEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRI 118

Query: 196 ALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAF 255
           ALANKE+L+  G  V+  A K   +ILP DSEHSAIFQC+ G  +  + +IILTASGG F
Sbjct: 119 ALANKESLVCAGELVMDAAKKSGAQILPVDSEHSAIFQCLPGEKQEGVEKIILTASGGPF 178

Query: 256 RDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIII 315
           RDWP+E+L  V    ALKHPNWSMG+KIT+DSAT+ NKGLEVIEAH+LFG  Y+ IE++I
Sbjct: 179 RDWPLEELANVTPEQALKHPNWSMGRKITIDSATMMNKGLEVIEAHWLFGLPYEQIEVVI 238

Query: 316 HPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSK 369
           HPQSIIHSMVE  D SV+ QLG PDMRLPI Y +++PER+         LDL+K
Sbjct: 239 HPQSIIHSMVEYVDGSVLAQLGPPDMRLPIAYALAYPERV---PSGVKPLDLTK 289

Length = 385

>gnl|CDD|223814 COG0743, Dxr, 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Lipid metabolism]

 Score =  460 bits (1185), Expect = e-162
 Identities = 165/294 (56%), Positives = 212/294 (72%), Gaps = 7/294 (2%)

Query: 76  PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNES 135
            K +++LGSTGSIGTQTLD++  + DKF VVALAAG N+ LLA+Q++ FKP+ V + +ES
Sbjct: 1   MKKLTILGSTGSIGTQTLDVIRRNPDKFEVVALAAGKNVELLAEQIREFKPKYVVIADES 60

Query: 136 LLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI 195
              E+++ L   E    +L GE+G+ E A   DA  V+  IVG AGL PT+AAI+AGK I
Sbjct: 61  AAKELEDLLPGTE----VLVGEEGLCELAAEDDADVVMNAIVGAAGLLPTLAAIKAGKTI 116

Query: 196 ALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAF 255
           ALANKE+L+  G  V+  A +   ++LP DSEH+AIFQC+QG  +  +++IILTASGG F
Sbjct: 117 ALANKESLVTAGELVMDAAKESGAQLLPVDSEHNAIFQCLQGETQKGVKKIILTASGGPF 176

Query: 256 RDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIII 315
           RD  +E+L  V    ALKHPNWSMG+KITVDSAT+ NKGLEVIEAH+LFG  Y+ IE++I
Sbjct: 177 RDKSLEELANVTPEQALKHPNWSMGRKITVDSATMMNKGLEVIEAHWLFGLPYEQIEVVI 236

Query: 316 HPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSK 369
           HPQSIIHSMVE  D SVI QLG PDMR PI Y +++PER+         LD +K
Sbjct: 237 HPQSIIHSMVEYVDGSVIAQLGPPDMRTPISYALAYPERVP---SAVEPLDFTK 287

Length = 385

>gnl|CDD|161787 TIGR00243, Dxr, 1-deoxy-D-xylulose 5-phosphate reductoisomerase

 Score =  422 bits (1087), Expect = e-148
 Identities = 163/294 (55%), Positives = 205/294 (69%), Gaps = 4/294 (1%)

Query: 77  KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
           K I +LGSTGSIG  TLD+V  + D F+VVAL+AG N+ L+ +Q+  F+P+ VA+ +E+ 
Sbjct: 2   KQIVILGSTGSIGKSTLDVVRHNPDHFQVVALSAGKNVALMVEQILEFRPKFVAIDDEAS 61

Query: 137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
           L ++K  L     + E+L GE+G+ E A   D   V+  IVG AGL PT+AAI AGK IA
Sbjct: 62  LKDLKTMLQQQGSRTEVLVGEEGICEMAALEDVDQVMNAIVGAAGLLPTLAAIRAGKTIA 121

Query: 197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ-GLPEGALRRIILTASGGAF 255
           LANKE+L+  G   L    K+ +++LP DSEH+AIFQ +Q GL E  +  IILTASGGAF
Sbjct: 122 LANKESLVTAGHLFLDAVKKYGVQLLPVDSEHNAIFQSLQHGLEELGVVSIILTASGGAF 181

Query: 256 RDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIII 315
           RD P+E L  V    ALKHPNWSMG+KIT+DSAT+ NKGLE IEA +LFGA  + I+++I
Sbjct: 182 RDTPLEDLPTVTPQQALKHPNWSMGRKITIDSATMMNKGLEYIEARWLFGASAEQIDVLI 241

Query: 316 HPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSK 369
           HPQSIIHSMVE QD SVI QLG PDMRLPI Y M+WP R+         LDL K
Sbjct: 242 HPQSIIHSMVEFQDGSVIAQLGEPDMRLPIAYAMAWPNRVNSG---VKPLDLCK 292

1-deoxy-D-xylulose 5-phosphate is converted to 2-C-methyl-D-erythritol 4-phosphate in the presence of NADPH. It is involved in the synthesis of isopentenyl diphosphate (IPP), a basic building block in isoprenoid, thiamin, and pyridoxal biosynthesis [Biosynthesis of cofactors, prosthetic groups, and carriers, Other]. Length = 389

>gnl|CDD|237107 PRK12464, PRK12464, 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

 Score =  405 bits (1043), Expect = e-141
 Identities = 145/289 (50%), Positives = 200/289 (69%), Gaps = 5/289 (1%)

Query: 81  VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEI 140
           +LGSTGSIGT  LD+V+ H + F+VV L A  NI LL  Q+KRF+P++V+V ++ L D +
Sbjct: 1   ILGSTGSIGTSALDVVSAHPEHFKVVGLTANYNIELLEQQIKRFQPRIVSVADKELADTL 60

Query: 141 KEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANK 200
           +  L+    K  I  G  G+I  A HP +  V++ +VG AGL PT+ A++A KDIALANK
Sbjct: 61  RTRLSANTSK--ITYGTDGLIAVATHPGSDLVLSSVVGAAGLLPTIEALKAKKDIALANK 118

Query: 201 ETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPV 260
           ETL+A G  V  LA ++  +++P DSEHSAIFQC+ G     + ++I+TASGGAFRD   
Sbjct: 119 ETLVAAGHIVTDLAKQNGCRLIPVDSEHSAIFQCLNGENNKEIDKLIVTASGGAFRDKTR 178

Query: 261 EKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIHPQSI 320
           E++  +   DALKHPNW MG K+T+DSATL NKG EVIEAH+LF   Y+ I+++IH +SI
Sbjct: 179 EEMATLTAKDALKHPNWLMGAKLTIDSATLMNKGFEVIEAHWLFDIPYEKIDVLIHKESI 238

Query: 321 IHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSK 369
           IHS+VE  D SV+ QLG PDMR+PI Y   +P R+     ++ +L+L +
Sbjct: 239 IHSLVEFIDGSVLAQLGAPDMRMPIQYAFHYPTRL---PSSYEKLNLLE 284

Length = 383

>gnl|CDD|217176 pfam02670, DXP_reductoisom, 1-deoxy-D-xylulose 5-phosphate reductoisomerase

 Score =  209 bits (534), Expect = 9e-68
 Identities = 78/129 (60%), Positives = 100/129 (77%)

Query: 79  ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLD 138
           I++LGSTGSIGTQTLD++  + D+F VVAL+AG N+ LLA+Q+K FKP+ VAV +E   +
Sbjct: 1   ITILGSTGSIGTQTLDVIRRNPDRFEVVALSAGRNVELLAEQIKEFKPKYVAVADEEAAE 60

Query: 139 EIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALA 198
           E+KEALA    K E+LAGE+G+ E A  P+A  VV  IVG AGL PT+AAI+AGK IALA
Sbjct: 61  ELKEALAGAGLKTEVLAGEEGLCELAALPEADIVVNAIVGAAGLLPTLAAIKAGKTIALA 120

Query: 199 NKETLIAGG 207
           NKE+L+A G
Sbjct: 121 NKESLVAAG 129

This is a family of 1-deoxy-D-xylulose 5-phosphate reductoisomerases. This enzyme catalyzes the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate in the presence of NADPH. This reaction is part of the terpenoid biosynthesis pathway. Length = 129

>gnl|CDD|203943 pfam08436, DXP_redisom_C, 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal

 Score =  175 bits (446), Expect = 3e-55
 Identities = 59/84 (70%), Positives = 68/84 (80%)

Query: 221 ILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMG 280
           ILP DSEHSAIFQC+QG  +  + +IILTASGG FRDW +E+L  V    ALKHPNWSMG
Sbjct: 1   ILPVDSEHSAIFQCLQGENKKEVEKIILTASGGPFRDWSLEELANVTPEQALKHPNWSMG 60

Query: 281 KKITVDSATLFNKGLEVIEAHYLF 304
            KIT+DSAT+ NKGLEVIEAH+LF
Sbjct: 61  AKITIDSATMMNKGLEVIEAHWLF 84

This domain is found to the C-terminus of pfam02670 domains in bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases which catalyze the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate in the presence of NADPH. Length = 84

>gnl|CDD|222027 pfam13288, DXPR_C, DXP reductoisomerase C-terminal domain

 Score = 53.2 bits (129), Expect = 6e-09
 Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 3/33 (9%)

Query: 337 GWPDMRLPIIYTMSWPERIYCSELTWPRLDLSK 369
           G PDMRLPI Y +S+PER+         LDL+K
Sbjct: 1   GVPDMRLPIAYALSYPERL---PSGVEPLDLTK 30

This is the C-terminal domain of the 1-deoxy-D-xylulose-5-phosphate reductoisomerase enzyme. This domain forms a left handed super-helix. Length = 118

>gnl|CDD|223536 COG0460, ThrA, Homoserine dehydrogenase [Amino acid transport and metabolism]

 Score = 40.3 bits (95), Expect = 0.001
 Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 19/147 (12%)

Query: 79  ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLD 138
           + +LG  G++G+  L+I+AE +++   +   AG  I ++A   +        VR+  LL+
Sbjct: 6   VGLLG-LGTVGSGVLEILAEKQEE---LRKRAGIEIRVVAVADRD----GSLVRDLDLLN 57

Query: 139 -EIKEALANVEEKPEILAGEQ--GVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI 195
            E+      +    E+L  E    V+E         V   +         + A+E GK +
Sbjct: 58  AEVWTTDGALSLGDEVLLDEDIDVVVEL--------VGGDVEPAEPADLYLKALENGKHV 109

Query: 196 ALANKETLIAGGPFVLPLAHKHNIKIL 222
             ANK  L      +   A K+ +K+L
Sbjct: 110 VTANKALLALHYHELREAAEKNGVKLL 136

Length = 333

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	369
PLN02696	454	1-deoxy-D-xylulose-5-phosphate reductoisomerase	100.0
COG0743	385	Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomeras	100.0
TIGR00243	389	Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomeras	100.0
PRK12464	383	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	100.0
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	100.0
PF08436	84	DXP_redisom_C: 1-deoxy-D-xylulose 5-phosphate redu	100.0
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	100.0
PRK06349	426	homoserine dehydrogenase; Provisional	98.32
PF03447	117	NAD_binding_3: Homoserine dehydrogenase, NAD bindi	98.03
PRK06270	341	homoserine dehydrogenase; Provisional	97.92
PRK13303	265	L-aspartate dehydrogenase; Provisional	97.92
PRK11579	346	putative oxidoreductase; Provisional	97.9
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	97.83
PF01408	120	GFO_IDH_MocA: Oxidoreductase family, NAD-binding R	97.68
PRK08374	336	homoserine dehydrogenase; Provisional	97.58
PRK06813	346	homoserine dehydrogenase; Validated	97.54
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	97.5
PRK06392	326	homoserine dehydrogenase; Provisional	97.48
PRK13304	265	L-aspartate dehydrogenase; Reviewed	97.36
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.32
COG0673	342	MviM Predicted dehydrogenases and related proteins	97.19
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	97.16
TIGR03215	285	ac_ald_DH_ac acetaldehyde dehydrogenase (acetylati	97.11
TIGR01761	343	thiaz-red thiazolinyl imide reductase. This reduct	97.07
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.02
PRK09466	810	metL bifunctional aspartate kinase II/homoserine d	96.81
PRK10206	344	putative oxidoreductase; Provisional	96.77
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	96.68
PRK04207	341	glyceraldehyde-3-phosphate dehydrogenase; Provisio	96.58
PRK08300	302	acetaldehyde dehydrogenase; Validated	96.58
COG0460	333	ThrA Homoserine dehydrogenase [Amino acid transpor	96.57
PRK09436	819	thrA bifunctional aspartokinase I/homoserine dehyd	96.53
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	96.47
COG4091	438	Predicted homoserine dehydrogenase [Amino acid tra	96.33
PRK00048	257	dihydrodipicolinate reductase; Provisional	96.29
TIGR00036	266	dapB dihydrodipicolinate reductase.	96.25
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	96.11
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	96.1
PLN02700	377	homoserine dehydrogenase family protein	95.96
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	95.84
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	95.59
COG1712	255	Predicted dinucleotide-utilizing enzyme [General f	95.48
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	95.22
PLN02778	298	3,5-epimerase/4-reductase	95.18
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.16
PRK10538	248	malonic semialdehyde reductase; Provisional	95.04
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	95.01
PRK08219	227	short chain dehydrogenase; Provisional	94.96
PRK07326	237	short chain dehydrogenase; Provisional	94.89
PRK07806	248	short chain dehydrogenase; Provisional	94.86
PRK12829	264	short chain dehydrogenase; Provisional	94.81
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	94.8
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	94.76
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	94.73
TIGR03855	229	NAD_NadX aspartate dehydrogenase. Members of this	94.69
PRK08267	260	short chain dehydrogenase; Provisional	94.64
PRK06101	240	short chain dehydrogenase; Provisional	94.61
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	94.51
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	94.51
PRK12828	239	short chain dehydrogenase; Provisional	94.5
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	94.43
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	94.42
PRK09186	256	flagellin modification protein A; Provisional	94.41
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	94.37
PRK07024	257	short chain dehydrogenase; Provisional	94.34
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.32
PRK07523	255	gluconate 5-dehydrogenase; Provisional	94.24
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.21
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.2
PRK06196	315	oxidoreductase; Provisional	94.17
PLN02583	297	cinnamoyl-CoA reductase	94.15
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	94.09
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	94.09
PRK06057	255	short chain dehydrogenase; Provisional	94.05
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	94.03
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	94.02
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	93.97
PRK06947	248	glucose-1-dehydrogenase; Provisional	93.96
PRK05717	255	oxidoreductase; Validated	93.91
PRK08226	263	short chain dehydrogenase; Provisional	93.86
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	93.83
PRK07825	273	short chain dehydrogenase; Provisional	93.81
PRK12743	256	oxidoreductase; Provisional	93.8
PRK08628	258	short chain dehydrogenase; Provisional	93.8
PRK08265	261	short chain dehydrogenase; Provisional	93.79
PRK06482	276	short chain dehydrogenase; Provisional	93.76
PRK07774	250	short chain dehydrogenase; Provisional	93.71
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	93.64
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	93.63
PRK05693	274	short chain dehydrogenase; Provisional	93.62
PRK06182	273	short chain dehydrogenase; Validated	93.6
PRK12939	250	short chain dehydrogenase; Provisional	93.6
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	93.54
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	93.54
CHL00194	317	ycf39 Ycf39; Provisional	93.52
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.51
PRK08278	273	short chain dehydrogenase; Provisional	93.5
PRK08263	275	short chain dehydrogenase; Provisional	93.48
PRK06138	252	short chain dehydrogenase; Provisional	93.42
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	93.39
PRK08643	256	acetoin reductase; Validated	93.39
PRK07454	241	short chain dehydrogenase; Provisional	93.39
PRK07035	252	short chain dehydrogenase; Provisional	93.36
PRK07067	257	sorbitol dehydrogenase; Provisional	93.34
PRK08589	272	short chain dehydrogenase; Validated	93.31
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	93.28
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	93.23
PRK06181	263	short chain dehydrogenase; Provisional	93.19
PRK06180	277	short chain dehydrogenase; Provisional	93.19
PLN02383	344	aspartate semialdehyde dehydrogenase	93.18
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	93.16
PRK07814	263	short chain dehydrogenase; Provisional	93.14
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	93.13
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	93.12
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	93.09
PLN03209	576	translocon at the inner envelope of chloroplast su	93.09
PRK06949	258	short chain dehydrogenase; Provisional	93.06
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	93.04
PRK12935	247	acetoacetyl-CoA reductase; Provisional	93.04
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	92.93
PRK06172	253	short chain dehydrogenase; Provisional	92.92
PRK12742	237	oxidoreductase; Provisional	92.9
PRK12744	257	short chain dehydrogenase; Provisional	92.9
PRK06194	287	hypothetical protein; Provisional	92.9
PRK12827	249	short chain dehydrogenase; Provisional	92.89
PRK09135	249	pteridine reductase; Provisional	92.85
PRK07890	258	short chain dehydrogenase; Provisional	92.81
PLN02695	370	GDP-D-mannose-3',5'-epimerase	92.8
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	92.78
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	92.77
PRK05867	253	short chain dehydrogenase; Provisional	92.73
PRK05866	293	short chain dehydrogenase; Provisional	92.73
smart00846	149	Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase,	92.72
PRK06500	249	short chain dehydrogenase; Provisional	92.66
PLN00112	444	malate dehydrogenase (NADP); Provisional	92.64
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	92.62
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	92.61
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	92.55
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	92.53
PRK07060	245	short chain dehydrogenase; Provisional	92.53
PRK09134	258	short chain dehydrogenase; Provisional	92.52
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	92.5
PLN02240	352	UDP-glucose 4-epimerase	92.48
PRK06128	300	oxidoreductase; Provisional	92.48
PRK07102	243	short chain dehydrogenase; Provisional	92.48
PRK07453	322	protochlorophyllide oxidoreductase; Validated	92.47
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	92.45
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	92.42
COG2910	211	Putative NADH-flavin reductase [General function p	92.4
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	92.34
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	92.3
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	92.28
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	92.28
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	92.24
PRK07478	254	short chain dehydrogenase; Provisional	92.23
PRK06914	280	short chain dehydrogenase; Provisional	92.15
PRK07063	260	short chain dehydrogenase; Provisional	92.11
PRK07904	253	short chain dehydrogenase; Provisional	92.08
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	92.07
PRK09072	263	short chain dehydrogenase; Provisional	92.06
PRK06841	255	short chain dehydrogenase; Provisional	92.01
PRK07832	272	short chain dehydrogenase; Provisional	91.99
PRK05875	276	short chain dehydrogenase; Provisional	91.98
PRK06924	251	short chain dehydrogenase; Provisional	91.94
PLN02260	668	probable rhamnose biosynthetic enzyme	91.91
PRK05872	296	short chain dehydrogenase; Provisional	91.86
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	91.82
PRK09242	257	tropinone reductase; Provisional	91.82
PLN02427	386	UDP-apiose/xylose synthase	91.8
PLN02572	442	UDP-sulfoquinovose synthase	91.8
PRK07109	334	short chain dehydrogenase; Provisional	91.79
PRK06483	236	dihydromonapterin reductase; Provisional	91.75
COG0300	265	DltE Short-chain dehydrogenases of various substra	91.7
TIGR01532	325	E4PD_g-proteo D-erythrose-4-phosphate dehydrogenas	91.69
PRK06124	256	gluconate 5-dehydrogenase; Provisional	91.69
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	91.65
PRK06197	306	short chain dehydrogenase; Provisional	91.65
PRK07201	657	short chain dehydrogenase; Provisional	91.61
PRK06198	260	short chain dehydrogenase; Provisional	91.57
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	91.56
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	91.51
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	91.51
PRK05650	270	short chain dehydrogenase; Provisional	91.47
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	91.47
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	91.42
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	91.39
PRK07097	265	gluconate 5-dehydrogenase; Provisional	91.39
TIGR02415	254	23BDH acetoin reductases. One member of this famil	91.38
PRK08085	254	gluconate 5-dehydrogenase; Provisional	91.32
TIGR01921	324	DAP-DH diaminopimelate dehydrogenase. This model r	91.32
PRK12938	246	acetyacetyl-CoA reductase; Provisional	91.25
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	91.24
TIGR01746	367	Thioester-redct thioester reductase domain. It has	91.22
PRK08340	259	glucose-1-dehydrogenase; Provisional	91.2
PRK07074	257	short chain dehydrogenase; Provisional	91.18
PLN02253	280	xanthoxin dehydrogenase	91.14
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	91.1
PRK05854	313	short chain dehydrogenase; Provisional	91.07
PLN02503	605	fatty acyl-CoA reductase 2	91.06
PRK12937	245	short chain dehydrogenase; Provisional	91.0
PRK05993	277	short chain dehydrogenase; Provisional	90.99
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	90.99
PRK12746	254	short chain dehydrogenase; Provisional	90.98
PRK06701	290	short chain dehydrogenase; Provisional	90.95
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	90.94
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	90.9
PRK06139	330	short chain dehydrogenase; Provisional	90.9
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	90.89
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	90.89
PRK09291	257	short chain dehydrogenase; Provisional	90.88
PRK07775	274	short chain dehydrogenase; Provisional	90.79
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	90.72
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	90.7
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	90.66
PRK08862	227	short chain dehydrogenase; Provisional	90.65
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	90.62
TIGR00639	190	PurN phosphoribosylglycinamide formyltransferase,	90.56
PRK08213	259	gluconate 5-dehydrogenase; Provisional	90.55
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	90.46
PRK07576	264	short chain dehydrogenase; Provisional	90.43
PRK08017	256	oxidoreductase; Provisional	90.34
PRK08339	263	short chain dehydrogenase; Provisional	90.3
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	90.29
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	90.2
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	90.11
PLN00016	378	RNA-binding protein; Provisional	90.1
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	90.06
PLN02260	668	probable rhamnose biosynthetic enzyme	90.03
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	89.97
PLN02653	340	GDP-mannose 4,6-dehydratase	89.97
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	89.95
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	89.95
PRK08177	225	short chain dehydrogenase; Provisional	89.94
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	89.93
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	89.83
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	89.74
PRK12824	245	acetoacetyl-CoA reductase; Provisional	89.73
PRK07831	262	short chain dehydrogenase; Provisional	89.69
PRK07023	243	short chain dehydrogenase; Provisional	89.65
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	89.63
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	89.62
PRK06114	254	short chain dehydrogenase; Provisional	89.62
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	89.61
PRK08251	248	short chain dehydrogenase; Provisional	89.61
PLN02214	342	cinnamoyl-CoA reductase	89.55
PRK07062	265	short chain dehydrogenase; Provisional	89.52
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	89.5
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	89.43
PLN02896	353	cinnamyl-alcohol dehydrogenase	89.41
PF00551	181	Formyl_trans_N: Formyl transferase; InterPro: IPR0	89.32
PLN02166	436	dTDP-glucose 4,6-dehydratase	89.12
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	89.01
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	88.97
PRK05884	223	short chain dehydrogenase; Provisional	88.89
PRK06179	270	short chain dehydrogenase; Provisional	88.86
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	88.83
PRK05876	275	short chain dehydrogenase; Provisional	88.82
COG2201	350	CheB Chemotaxis response regulator containing a Ch	88.78
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	88.76
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	88.72
PRK14982	340	acyl-ACP reductase; Provisional	88.66
PRK08277	278	D-mannonate oxidoreductase; Provisional	88.64
PRK10675	338	UDP-galactose-4-epimerase; Provisional	88.64
TIGR01745	366	asd_gamma aspartate-semialdehyde dehydrogenase, ga	88.52
PRK13535	336	erythrose 4-phosphate dehydrogenase; Provisional	88.5
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	88.48
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	88.46
PLN02206	442	UDP-glucuronate decarboxylase	88.41
PRK07985	294	oxidoreductase; Provisional	88.4
COG3320	382	Putative dehydrogenase domain of multifunctional n	88.38
PRK06484	520	short chain dehydrogenase; Validated	88.31
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	88.29
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	88.29
PRK05855	582	short chain dehydrogenase; Validated	88.25
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	88.18
TIGR01546	333	GAPDH-II_archae glyceraldehyde-3-phosphate dehydro	88.17
PRK07677	252	short chain dehydrogenase; Provisional	88.14
PRK07417	279	arogenate dehydrogenase; Reviewed	88.12
KOG4777	361	consensus Aspartate-semialdehyde dehydrogenase [Am	88.09
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	88.09
PLN02650	351	dihydroflavonol-4-reductase	88.02
PRK06484	520	short chain dehydrogenase; Validated	87.96
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	87.88
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	87.82
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	87.78
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	87.72
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	87.71
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	87.71
PRK06123	248	short chain dehydrogenase; Provisional	87.6
PRK07069	251	short chain dehydrogenase; Validated	87.52
PRK06953	222	short chain dehydrogenase; Provisional	87.48
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	87.46
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	87.42
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	87.4
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	87.38
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	87.32
PRK08703	239	short chain dehydrogenase; Provisional	87.31
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	87.27
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	87.24
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	87.2
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	87.2
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	87.15
PRK08936	261	glucose-1-dehydrogenase; Provisional	86.99
PLN00198	338	anthocyanidin reductase; Provisional	86.87
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	86.86
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	86.52
PRK06027	286	purU formyltetrahydrofolate deformylase; Reviewed	86.4
PRK07791	286	short chain dehydrogenase; Provisional	86.37
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	86.34
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	86.26
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	86.24
PRK10124	463	putative UDP-glucose lipid carrier transferase; Pr	86.1
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	86.03
PRK07577	234	short chain dehydrogenase; Provisional	86.02
PLN02775	286	Probable dihydrodipicolinate reductase	85.98
PRK07201	657	short chain dehydrogenase; Provisional	85.93
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	85.89
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	85.75
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	85.7
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	85.54
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	85.53
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	85.49
PRK06125	259	short chain dehydrogenase; Provisional	85.39
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	85.34
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	85.3
PRK13011	286	formyltetrahydrofolate deformylase; Reviewed	85.15
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	85.14
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	85.11
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	84.98
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	84.96
PRK08303	305	short chain dehydrogenase; Provisional	84.95
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	84.92
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	84.84
PRK12747	252	short chain dehydrogenase; Provisional	84.76
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	84.72
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	84.61
PLN02686	367	cinnamoyl-CoA reductase	84.55
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	84.25
TIGR00655	280	PurU formyltetrahydrofolate deformylase. This mode	84.22
KOG2733	423	consensus Uncharacterized membrane protein [Functi	83.95
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	83.82
PRK08324	681	short chain dehydrogenase; Validated	83.81
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	83.8
PRK07856	252	short chain dehydrogenase; Provisional	83.64
PLN02780	320	ketoreductase/ oxidoreductase	83.49
PRK08306	296	dipicolinate synthase subunit A; Reviewed	83.45
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	83.42
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	83.39
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	83.28
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	83.09
TIGR03025	445	EPS_sugtrans exopolysaccharide biosynthesis polypr	83.03
PRK06720	169	hypothetical protein; Provisional	83.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	82.86
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	82.84
PRK13301	267	putative L-aspartate dehydrogenase; Provisional	82.83
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	82.77
PRK07634	245	pyrroline-5-carboxylate reductase; Reviewed	82.54
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	82.45
KOG2741	351	consensus Dimeric dihydrodiol dehydrogenase [Carbo	82.4
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	82.37
PLN02514	357	cinnamyl-alcohol dehydrogenase	82.32
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	82.12
PLN02996	491	fatty acyl-CoA reductase	82.07
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	81.99
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	81.81
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	81.61
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	81.49
PLN03096	395	glyceraldehyde-3-phosphate dehydrogenase A; Provis	81.43
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	81.38
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	81.35
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	81.28
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	81.08
PRK05599	246	hypothetical protein; Provisional	80.87
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	80.84
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	80.78
PLN02586	360	probable cinnamyl alcohol dehydrogenase	80.7
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	80.69
TIGR02130	275	dapB_plant dihydrodipicolinate reductase. This nar	80.56
COG3268	382	Uncharacterized conserved protein [Function unknow	80.48
cd08252	336	AL_MDR Arginate lyase and other MDR family members	80.38
PF07287	362	DUF1446: Protein of unknown function (DUF1446); In	80.36
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	80.32
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	80.23
PRK05472	213	redox-sensing transcriptional repressor Rex; Provi	80.06
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	80.02

>PLN02696 1-deoxy-D-xylulose-5-phosphate reductoisomerase

Probab=100.00  E-value=3.4e-139  Score=1052.91  Aligned_cols=342  Identities=83%  Similarity=1.329  Sum_probs=325.0

Q ss_pred             CCCCCCccccccccccccccceeEee-----cCCCCCCCCCccccccccCCCCCCeeEEEEecCChHhHHHHHHHHhCCC
Q 017567           27 PKLSGGFPLKRKDNATATFGRIVQCS-----AQGPPPAWPGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHED  101 (369)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~a~p~~~~~~~~~~~~~~~kkI~ILGSTGSIGtqTLdVI~~~pd  101 (369)
                      ++++++...++++. ....++|++|+     .+.|+++|||++..++..+.|..+|||+|||||||||+||||||++|||
T Consensus         4 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KkI~ILGSTGSIGtqtLdVI~~~pd   82 (454)
T PLN02696          4 PKLPGGFTTKRSSS-RQSRGRRAKCSVAGWSQNSPPPAWPGRAVVEPGRKGWDGPKPISLLGSTGSIGTQTLDIVAENPD   82 (454)
T ss_pred             ccCCCcceeccccc-cccccccccccccccccCCCCccCccccccCCcccccCCccEEEEecCCcHhhHHHHHHHHhCcc
Confidence            58899999999998 77888999999     4458999999998778789999999999999999999999999999999


Q ss_pred             ceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEecHHHHHHHhcCCCCCEEEEeccCccC
Q 017567          102 KFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAG  181 (369)
Q Consensus       102 ~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G~~gl~~~~~~~~~D~Vv~AIvG~aG  181 (369)
                      +|+|++|++|+|+++|++|+++|+|++|++.|++.+.+|++.|.+.+.+++++.|++|++++++.+++|+||+||||++|
T Consensus        83 ~f~vvaLaag~Ni~lL~~q~~~f~p~~v~v~d~~~~~~l~~~l~~~~~~~~vl~G~egl~~la~~~evDiVV~AIvG~aG  162 (454)
T PLN02696         83 KFKVVALAAGSNVTLLADQVRKFKPKLVAVRNESLVDELKEALADLDDKPEIIPGEEGIVEVARHPEAVTVVTGIVGCAG  162 (454)
T ss_pred             ccEEEEEECCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhcCCCCCcEEEECHHHHHHHHcCCCCCEEEEeCccccc
Confidence            99999999999999999999999999999999999999999885422357999999999999999999999999999999


Q ss_pred             cHHHHHHHHcCCceeeecccceeecccchhHHhhhcCCeEeecccchhhHHHhhcCCCCCccceEEEeecCCCCCCCChh
Q 017567          182 LKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVE  261 (369)
Q Consensus       182 L~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~~~~IlPVDSEHsAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e  261 (369)
                      |.||++||++||+|||||||||||||++|+++++++|++|+|||||||||||||+|+++++|+||||||||||||+|++|
T Consensus       163 L~pTl~AIkaGK~VALANKESLV~aG~lI~~~ak~~~~~IlPVDSEHsAIfQ~L~g~~~~~v~kiiLTASGGpFr~~~~e  242 (454)
T PLN02696        163 LKPTVAAIEAGKDIALANKETLIAGGPFVLPLAKKHGVKILPADSEHSAIFQCIQGLPEGGLRRIILTASGGAFRDWPVE  242 (454)
T ss_pred             hHHHHHHHHCCCcEEEecHHHHHhhHHHHHHHHHHcCCeEeecchhhHHHHHHccCCCccCccEEEEECCchhccCCCHH
Confidence            99999999999999999999999999999999999999999999999999999999877789999999999999999999


Q ss_pred             hhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhhhhhhcCCCCCceeEEEcCCcceeeeEEeccCcEEEecCCCCc
Q 017567          262 KLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIHPQSIIHSMVETQDSSVIGQLGWPDM  341 (369)
Q Consensus       262 ~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIEA~~LF~i~~d~IevvIHPqSiIHsmVef~DGSv~Aql~~PDM  341 (369)
                      +|++||++|||+||||+||+||||||||||||||||||||||||+|||+|||||||||||||||||.|||++||||+|||
T Consensus       243 ~l~~vT~~~ALkHP~W~MG~KITIDSATmmNKglEvIEA~~LF~~~~d~I~vvIHPqSiIHsmVef~DGS~~Aql~~pDM  322 (454)
T PLN02696        243 KLKEVKVADALKHPNWSMGKKITVDSATLMNKGLEVIEAHYLFGADYDDIDIVIHPQSIIHSMVETQDSSVLAQLGWPDM  322 (454)
T ss_pred             HHhCCCHHHHhhCCCCcCCCeeeeehHhhhhhhHHHHHHHHHcCCCHHHeEEEECcCCeeeEEEEEcCCcEEEEecCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHhccCCCCccccCCCCCCCCCCCC
Q 017567          342 RLPIIYTMSWPERIYCSELTWPRLDLSK  369 (369)
Q Consensus       342 rlPI~yAL~yP~R~~~~~~~~~~ldl~~  369 (369)
                      |+||+|||+||+|.++++..+++|||.+
T Consensus       323 rlPI~yAL~yP~R~~~~~~~~~~ldl~~  350 (454)
T PLN02696        323 RLPILYTMSWPDRVPCSEITWPRLDLCK  350 (454)
T ss_pred             HHHHHHHcCCccccccccCCCCCcCccc
Confidence            9999999999999974345688898863

>COG0743 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Lipid metabolism]

Probab=100.00  E-value=7.8e-134  Score=988.93  Aligned_cols=287  Identities=57%  Similarity=0.908  Sum_probs=280.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      +|+|+|||||||||+|||||+++|||+|+|+||++|+|+++|++||++|+|++|++.|+..+++++..+.    +++|+.
T Consensus         1 ~k~i~iLGSTGSIG~qtLdVi~~~p~~f~vval~ag~n~~~l~~q~~~f~P~~v~~~d~~~~~~l~~~~~----~~~v~~   76 (385)
T COG0743           1 MKKLTILGSTGSIGTQTLDVIRRNPDKFEVVALAAGKNVELLAEQIREFKPKYVVIADESAAKELEDLLP----GTEVLV   76 (385)
T ss_pred             CceEEEEecCCchhHHHHHHHHhCCCcEEEEEEecCCcHHHHHHHHHHhCCceEEecChHHHHHHHhhcc----CceEEe
Confidence            5899999999999999999999999999999999999999999999999999999999999999998875    489999


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeecccchhHHhhhcCCeEeecccchhhHHHhh
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI  235 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~~~~IlPVDSEHsAIfQ~L  235 (369)
                      |++|++++++.+++|+||+||||++||.||++|+++||+||||||||||+||+|+++.+|++|++|+|||||||||||||
T Consensus        77 G~~~l~e~a~~~~~d~Vm~AivG~aGL~pTlaAi~aGK~iaLANKEsLV~aG~l~~~~~k~~g~~llPVDSEH~AifQ~L  156 (385)
T COG0743          77 GEEGLCELAAEDDADVVMNAIVGAAGLLPTLAAIKAGKTIALANKESLVTAGELVMDAAKESGAQLLPVDSEHNAIFQCL  156 (385)
T ss_pred             cHHHHHHHHhcCCCCEEeehhhhhcccHHHHHHHHcCCceeecchhhhhcccHHHHHHHHHcCCEEeccCchhHHHHHHc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhhhhhhcCCCCCceeEEE
Q 017567          236 QGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIII  315 (369)
Q Consensus       236 ~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIEA~~LF~i~~d~IevvI  315 (369)
                      +|+..++|+||||||||||||+|++|+|.+|||+|||+||||+||+||||||||||||||||||||||||+|||+|||||
T Consensus       157 ~~~~~~~v~~iiLTASGGpFR~~~~~~L~~VT~eqAl~HPnWsMG~KITvDSATmmNKGLEvIEA~~LF~~~~~~IeVvI  236 (385)
T COG0743         157 QGETQKGVKKIILTASGGPFRDKSLEELANVTPEQALKHPNWSMGRKITVDSATMMNKGLEVIEAHWLFGLPYEQIEVVI  236 (385)
T ss_pred             CccccCcceEEEEecCCCCcCCCCHHHHccCCHHHHhcCCCCCCCCcccccHHHHhhhhHHHHHHHHHhCCCHHHeeEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCcceeeeEEeccCcEEEecCCCCchhHHHhccCCCCccccCCCCCCCCCCCC
Q 017567          316 HPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSK  369 (369)
Q Consensus       316 HPqSiIHsmVef~DGSv~Aql~~PDMrlPI~yAL~yP~R~~~~~~~~~~ldl~~  369 (369)
                      ||||||||||||.|||++||||+||||+||+|||+||+|.+   ..+++|||.+
T Consensus       237 HPQSiIHsmV~~~DGSviAqlg~pDMr~PI~yAl~~P~R~~---~~~~~ldf~~  287 (385)
T COG0743         237 HPQSIIHSMVEYVDGSVIAQLGPPDMRTPISYALAYPERVP---SAVEPLDFTK  287 (385)
T ss_pred             cccchheeeEEeccCCEEEecCCcchhhHHHHHhcCCcccc---cCccccchhh
Confidence            99999999999999999999999999999999999999995   4778899863

>TIGR00243 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase

Probab=100.00  E-value=9e-133  Score=990.41  Aligned_cols=290  Identities=56%  Similarity=0.875  Sum_probs=278.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      ||+|+|||||||||+|||||+++|||+|+|+||+||+|+++|.+|+++|+|++|++.|+..+.++++.+.+.+.++++++
T Consensus         1 Mk~i~IlGsTGSIG~qtL~Vi~~~~~~f~v~~Laa~~n~~~L~~q~~~f~p~~v~i~d~~~~~~l~~~l~~~~~~~~v~~   80 (389)
T TIGR00243         1 MKQIVILGSTGSIGKSTLDVVRHNPDHFQVVALSAGKNVALMVEQILEFRPKFVAIDDEASLKDLKTMLQQQGSRTEVLV   80 (389)
T ss_pred             CceEEEEecChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHcCCCEEEEcCHHHHHHHHHHhhcCCCCcEEEE
Confidence            47999999999999999999999999999999999999999999999999999999999999999998742234589999


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeecccchhHHhhhcCCeEeecccchhhHHHhh
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI  235 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~~~~IlPVDSEHsAIfQ~L  235 (369)
                      |++|++++++.+++|+||+||||++||.||++||++||+|||||||||||||++|++++++++++|+|||||||||||||
T Consensus        81 G~~~l~~l~~~~~~D~vv~AivG~aGL~pt~~Ai~~gk~iaLANKEsLV~aG~li~~~a~~~~~~I~PVDSEHsAIfQ~L  160 (389)
T TIGR00243        81 GEEGICEMAALEDVDQVMNAIVGAAGLLPTLAAIRAGKTIALANKESLVTAGHLFLDAVKKYGVQLLPVDSEHNAIFQSL  160 (389)
T ss_pred             CHHHHHHHHcCCCCCEEEEhhhcHhhHHHHHHHHHCCCcEEEechhHHHhhHHHHHHHHHHcCCeEEeecchHhHHHHHc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             c-CCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhhhhhhcCCCCCceeEE
Q 017567          236 Q-GLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEII  314 (369)
Q Consensus       236 ~-g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIEA~~LF~i~~d~Ievv  314 (369)
                      + |++.++|++|||||||||||+|++|+|++|||+|||+||||+||+||||||||||||||||||||||||+|||+||||
T Consensus       161 ~~g~~~~~v~kiiLTASGGpFr~~~~e~l~~vt~~~AL~HP~W~MG~KITIDSATmmNKglEvIEA~~LF~~~~d~I~vv  240 (389)
T TIGR00243       161 QHGLEELGVVSIILTASGGAFRDTPLEDLPTVTPQQALKHPNWSMGRKITIDSATMMNKGLEYIEARWLFGASAEQIDVL  240 (389)
T ss_pred             ccCCCcccccEEEEECCCcccCCCCHHHHhCCCHHHHhcCCCCcCCCeeeeehHhhhhhhHHHHHHHHHcCCCHHHeEEE
Confidence            9 876667999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EcCCcceeeeEEeccCcEEEecCCCCchhHHHhccCCCCccccCCCCCCCCCCC
Q 017567          315 IHPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLS  368 (369)
Q Consensus       315 IHPqSiIHsmVef~DGSv~Aql~~PDMrlPI~yAL~yP~R~~~~~~~~~~ldl~  368 (369)
                      |||||||||||||.|||++||||.||||+||+|||+||+|.+   ...++|||.
T Consensus       241 IHpqSiIHsmVef~DGSv~aql~~pDMrlPI~yAL~yP~R~~---~~~~~ldl~  291 (389)
T TIGR00243       241 IHPQSIIHSMVEFQDGSVIAQLGEPDMRLPIAYAMAWPNRVN---SGVKPLDLC  291 (389)
T ss_pred             ECCCCceeEEEEEcCccEEEEeCCCCcHHHHHHHcCCccccc---CCCCCcCcc
Confidence            999999999999999999999999999999999999999995   357788876

1-deoxy-D-xylulose 5-phosphate is converted to 2-C-methyl-D-erythritol 4-phosphate in the presence of NADPH. It is involved in the synthesis of isopentenyl diphosphate (IPP), a basic building block in isoprenoid, thiamin, and pyridoxal biosynthesis.

>PRK12464 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=100.00  E-value=2.9e-131  Score=978.65  Aligned_cols=283  Identities=51%  Similarity=0.863  Sum_probs=274.1

Q ss_pred             EEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEecHHHH
Q 017567           81 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGV  160 (369)
Q Consensus        81 ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G~~gl  160 (369)
                      |||||||||+||||||++|||+|+|+||+||+|+++|.+|+++|+|++|++.|++.+.+|++.+.+  .++++++|++|+
T Consensus         1 ILGsTGSIG~qtLdVi~~~~d~f~v~~Laa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~l~~--~~~~v~~G~~~l   78 (383)
T PRK12464          1 ILGSTGSIGTSALDVVSAHPEHFKVVGLTANYNIELLEQQIKRFQPRIVSVADKELADTLRTRLSA--NTSKITYGTDGL   78 (383)
T ss_pred             CCccccHHHHHHHHHHHhCccccEEEEEECCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhccC--CCcEEEECHHHH
Confidence            799999999999999999999999999999999999999999999999999999999999988742  458999999999


Q ss_pred             HHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeecccchhHHhhhcCCeEeecccchhhHHHhhcCCCC
Q 017567          161 IEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPE  240 (369)
Q Consensus       161 ~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~~~~IlPVDSEHsAIfQ~L~g~~~  240 (369)
                      +++++.+++|+||+||||++||.||++||++||+|||||||||||||++|++++++++++|+|||||||||||||+|++.
T Consensus        79 ~~l~~~~~~D~vv~AivG~aGL~pt~~Ai~~gk~iaLANKESLV~aG~li~~~~~~~~~~iiPVDSEHsAIfQ~L~~~~~  158 (383)
T PRK12464         79 IAVATHPGSDLVLSSVVGAAGLLPTIEALKAKKDIALANKETLVAAGHIVTDLAKQNGCRLIPVDSEHSAIFQCLNGENN  158 (383)
T ss_pred             HHHHcCCCCCEEEEhhhcHhhHHHHHHHHHCCCcEEEechhhHhhhHHHHHHHHHHcCCeEEeechhHHHHHHHccCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999876


Q ss_pred             CccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhhhhhhcCCCCCceeEEEcCCcc
Q 017567          241 GALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIHPQSI  320 (369)
Q Consensus       241 ~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIEA~~LF~i~~d~IevvIHPqSi  320 (369)
                      ++|++|||||||||||+|++|+|++|||+|||+||||+||+||||||||||||||||||||||||+||||||||||||||
T Consensus       159 ~~v~kiiLTASGGpFr~~~~e~l~~vT~~~AL~HP~W~MG~KITIDSATmmNKglEvIEA~~LF~i~~d~I~vvIHPqSi  238 (383)
T PRK12464        159 KEIDKLIVTASGGAFRDKTREEMATLTAKDALKHPNWLMGAKLTIDSATLMNKGFEVIEAHWLFDIPYEKIDVLIHKESI  238 (383)
T ss_pred             ccccEEEEECCCcccCCCCHHHHhCCCHHHHhcCCCCcCCCeeeeehHhhhhhhHHHHHHHHHcCCCHHHeEEEECCCCc
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeeEEeccCcEEEecCCCCchhHHHhccCCCCccccCCCCCCCCCCC
Q 017567          321 IHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLS  368 (369)
Q Consensus       321 IHsmVef~DGSv~Aql~~PDMrlPI~yAL~yP~R~~~~~~~~~~ldl~  368 (369)
                      |||||||.|||++||||.||||+||+|||+||+|.+   ...++|||.
T Consensus       239 VHsmVef~DGSv~aql~~pDMr~PI~yAL~yP~R~~---~~~~~ldl~  283 (383)
T PRK12464        239 IHSLVEFIDGSVLAQLGAPDMRMPIQYAFHYPTRLP---SSYEKLNLL  283 (383)
T ss_pred             eeEEEEEcCccEEEEeCCCCcHHHHHHHcCCccccC---CCCCCcCcc
Confidence            999999999999999999999999999999999995   357788876

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=100.00  E-value=4.2e-122  Score=915.17  Aligned_cols=288  Identities=60%  Similarity=0.946  Sum_probs=279.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      ||+|+|||||||||+|||||++++||+|+|+||+|++|+++|.+|+++|+|++|++.|++.+.+|++.+.+  .++++++
T Consensus         1 mk~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~--~~~~v~~   78 (385)
T PRK05447          1 MKRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAA--AGIEVLA   78 (385)
T ss_pred             CceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhcc--CCceEEE
Confidence            58999999999999999999999999999999999999999999999999999999999999999998753  4578999


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeecccchhHHhhhcCCeEeecccchhhHHHhh
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI  235 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~~~~IlPVDSEHsAIfQ~L  235 (369)
                      |++|++++++.+++|+||+||+|++||.||++||++||+|+|||||+||+||++|+++++++|++|+|||||||||||||
T Consensus        79 G~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaLANKEslV~aG~~i~~~a~~~g~~i~PVDSEh~ai~q~l  158 (385)
T PRK05447         79 GEEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIALANKESLVCAGELVMDAAKKSGAQILPVDSEHSAIFQCL  158 (385)
T ss_pred             ChhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEEeCHHHHHhhHHHHHHHHHHcCCeEEEECHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhhhhhhcCCCCCceeEEE
Q 017567          236 QGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIII  315 (369)
Q Consensus       236 ~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIEA~~LF~i~~d~IevvI  315 (369)
                      ++++.++|++|+|||||||||+|++|+|++|||+|||+||||+||+|||||||||||||||+||||||||+|||+|||||
T Consensus       159 ~~~~~~~i~~iilTASGGpFr~~~~~~l~~vt~~~al~HPnW~MG~kitiDSAtm~NKgle~IEA~~Lf~~~~~~I~vvI  238 (385)
T PRK05447        159 PGEKQEGVEKIILTASGGPFRDWPLEELANVTPEQALKHPNWSMGRKITIDSATMMNKGLEVIEAHWLFGLPYEQIEVVI  238 (385)
T ss_pred             cCCCccccceEEEecCCCcccCCCHHHHhcCCHHHHhcCCCCCCCCceeecHHHHhcchHHHHhHHHHcCCChhhEEEEE
Confidence            99877789999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCcceeeeEEeccCcEEEecCCCCchhHHHhccCCCCccccCCCCCCCCCCC
Q 017567          316 HPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLS  368 (369)
Q Consensus       316 HPqSiIHsmVef~DGSv~Aql~~PDMrlPI~yAL~yP~R~~~~~~~~~~ldl~  368 (369)
                      ||||||||||||+|||++||||.||||+||+|||+||+|.+   ...++|||.
T Consensus       239 HpqSivHsmVef~DGsv~aql~~pDMr~pI~yaL~~P~R~~---~~~~~ld~~  288 (385)
T PRK05447        239 HPQSIIHSMVEYVDGSVLAQLGPPDMRLPIAYALAYPERVP---SGVKPLDLT  288 (385)
T ss_pred             CCcCceeEEEEEeCCcEEEeeCCCCcHHHHHHHcCCcccCC---CCCCCcCcc
Confidence            99999999999999999999999999999999999999994   467888876

>PF08436 DXP_redisom_C: 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; InterPro: IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=100.00  E-value=8e-58  Score=369.23  Aligned_cols=84  Identities=73%  Similarity=1.126  Sum_probs=78.0

Q ss_pred             EeecccchhhHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhhh
Q 017567          221 ILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEA  300 (369)
Q Consensus       221 IlPVDSEHsAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIEA  300 (369)
                      |+|||||||||||||++.+.++|++|||||||||||++++++|++||++|||+||||+||+|||||||||||||||||||
T Consensus         1 i~PvDSEHsAifQ~L~~~~~~~v~~i~lTASGGpFr~~~~~~l~~vt~~~al~HP~W~MG~KITiDSATm~NKglEviEA   80 (84)
T PF08436_consen    1 ILPVDSEHSAIFQCLQGEKREEVEKIILTASGGPFRDKPREELKNVTPEQALKHPNWSMGKKITIDSATMMNKGLEVIEA   80 (84)
T ss_dssp             EEE-SHHHHHHHHHSGHHHHCTEEEEEEEE--STTTTSHHHHHTT--HHHHTSSSSSCCHHHHHHHHHTTHHHHHHHHHH
T ss_pred             CcccccHHHHHHHHCCCCCccccCEEEEECcchhhCCCCHHHHcCCCHHHHhhCCCCcCCCeeeechHHHHHHhHHHHHH
Confidence            79999999999999999988899999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhc
Q 017567          301 HYLF  304 (369)
Q Consensus       301 ~~LF  304 (369)
                      ||||
T Consensus        81 ~~LF   84 (84)
T PF08436_consen   81 HWLF   84 (84)
T ss_dssp             HHHH
T ss_pred             HhhC
Confidence            9999

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found to the C terminus of IPR013512 from INTERPRO domains in bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0005515 protein binding; PDB: 3AUA_A 3AU9_B 3AU8_B 3A14_A 3A06_A 2Y1D_B 4AIC_A 2JD0_B 2Y1C_B 2JD1_A ....

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=100.00  E-value=4.6e-48  Score=335.58  Aligned_cols=129  Identities=57%  Similarity=0.852  Sum_probs=118.8

Q ss_pred             EEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEecHH
Q 017567           79 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQ  158 (369)
Q Consensus        79 I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G~~  158 (369)
                      |+|||||||||+||||||++|||+|+|+||+||+|+++|.+|+++|+|++|++.|++.++++++.+...+.+++++.|++
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~   80 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPE   80 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHH
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChH
Confidence            78999999999999999999999999999999999999999999999999999999999999998864456799999999


Q ss_pred             HHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeecc
Q 017567          159 GVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG  207 (369)
Q Consensus       159 gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~aG  207 (369)
                      |++++++++++|+||+||||++||+||++||++||+|||||||||||||
T Consensus        81 ~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaLANKEsLV~aG  129 (129)
T PF02670_consen   81 GLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIALANKESLVCAG  129 (129)
T ss_dssp             HHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE--SHHHHHHH
T ss_pred             HHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEEechhhhhcCC
Confidence            9999999899999999999999999999999999999999999999998

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK06349 homoserine dehydrogenase; Provisional

Probab=98.32  E-value=2.9e-06  Score=86.29  Aligned_cols=116  Identities=22%  Similarity=0.339  Sum_probs=86.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCC--------ceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHED--------KFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANV  147 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd--------~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~  147 (369)
                      +-+|+|+| +|.||+..++++.++++        +++|++++.. |.++.    +.+.....                  
T Consensus         3 ~i~VgiiG-~G~VG~~~~~~L~~~~~~l~~~~g~~i~l~~V~~~-~~~~~----~~~~~~~~------------------   58 (426)
T PRK06349          3 PLKVGLLG-LGTVGSGVVRILEENAEEIAARAGRPIEIKKVAVR-DLEKD----RGVDLPGI------------------   58 (426)
T ss_pred             eEEEEEEe-eCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEeC-Chhhc----cCCCCccc------------------
Confidence            45899999 79999999999988763        6899998764 44332    11111000                  


Q ss_pred             CCCceEEecHHHHHHHhcCCCCCEEEEeccCc-cCcHHHHHHHHcCCceeeecccceeecccchhHHhhhcCCeEe
Q 017567          148 EEKPEILAGEQGVIEAARHPDAVTVVTGIVGC-AGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKIL  222 (369)
Q Consensus       148 ~~~~~v~~G~~gl~~~~~~~~~D~Vv~AIvG~-aGL~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~~~~Il  222 (369)
                          .+.   ....+++..+++|+|+.++.|. .+..-+.+|+++||.|..+||.-+..-|+-+.++|+++|+.+.
T Consensus        59 ----~~~---~d~~~ll~d~~iDvVve~tg~~~~~~~~~~~aL~~GkhVVtaNK~~~a~~~~eL~~lA~~~gv~l~  127 (426)
T PRK06349         59 ----LLT---TDPEELVNDPDIDIVVELMGGIEPARELILKALEAGKHVVTANKALLAVHGAELFAAAEEKGVDLY  127 (426)
T ss_pred             ----cee---CCHHHHhhCCCCCEEEECCCCchHHHHHHHHHHHCCCeEEEcCHHHHHHHHHHHHHHHHHcCCcEE
Confidence                010   1245667778899999998663 3455567999999999999998888889999999999998876

>PF03447 NAD_binding_3: Homoserine dehydrogenase, NAD binding domain; InterPro: IPR005106 Bacteria, plants and fungi metabolise aspartic acid to produce four amino acids - lysine, threonine, methionine and isoleucine - in a series of reactions known as the aspartate pathway

Probab=98.03  E-value=1.3e-06  Score=72.62  Aligned_cols=109  Identities=24%  Similarity=0.320  Sum_probs=73.0

Q ss_pred             CChHhHHHHHHHHhCCC--ceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEecHHHHHH
Q 017567           85 TGSIGTQTLDIVAEHED--KFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIE  162 (369)
Q Consensus        85 TGSIGtqTLdVI~~~pd--~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G~~gl~~  162 (369)
                      .|.||++-++.+.++++  +|+|++++..+  ..+.....                   ....+    ..+..   .+.+
T Consensus         2 ~G~VG~~l~~~l~~~~~~~~~~v~~v~~~~--~~~~~~~~-------------------~~~~~----~~~~~---~~~~   53 (117)
T PF03447_consen    2 FGNVGRGLLEQLKEQQERIDLEVVGVADRS--MLISKDWA-------------------ASFPD----EAFTT---DLEE   53 (117)
T ss_dssp             -SHHHHHHHHHHHHTHHHCEEEEEEEEESS--EEEETTHH-------------------HHHTH----SCEES---SHHH
T ss_pred             CCHHHHHHHHHHHhCcccCCEEEEEEEECC--chhhhhhh-------------------hhccc----ccccC---CHHH
Confidence            69999999999999875  69999988755  21111111                   11111    11222   2344


Q ss_pred             HhcCCCCCEEEEeccCccCcHH-HHHHHHcCCceeeeccccee--ecccchhHHhhhcCCeEe
Q 017567          163 AARHPDAVTVVTGIVGCAGLKP-TVAAIEAGKDIALANKETLI--AGGPFVLPLAHKHNIKIL  222 (369)
Q Consensus       163 ~~~~~~~D~Vv~AIvG~aGL~p-t~~Ai~~gK~iaLANKEsLV--~aG~li~~~a~k~~~~Il  222 (369)
                      +.+..++|+||.+ .|...+.. ...++++|+.|..+||+-+.  .-++-|.++|+++|++++
T Consensus        54 ~~~~~~~dvvVE~-t~~~~~~~~~~~~L~~G~~VVt~nk~ala~~~~~~~L~~~A~~~g~~~~  115 (117)
T PF03447_consen   54 LIDDPDIDVVVEC-TSSEAVAEYYEKALERGKHVVTANKGALADEALYEELREAARKNGVRIY  115 (117)
T ss_dssp             HHTHTT-SEEEE--SSCHHHHHHHHHHHHTTCEEEES-HHHHHSHHHHHHHHHHHHHHT-EEE
T ss_pred             HhcCcCCCEEEEC-CCchHHHHHHHHHHHCCCeEEEECHHHhhhHHHHHHHHHHHHHcCCEEE
Confidence            4444479999999 55444443 67899999999999999999  889999999999998874

Additionally, several important metabolic intermediates are produced by these reactions, such as diaminopimelic acid, an essential component of bacterial cell wall biosynthesis, and dipicolinic acid, which is involved in sporulation in Gram-positive bacteria. Members of the animal kingdom do not posses this pathway and must therefore acquire these essential amino acids through their diet. Research into improving the metabolic flux through this pathway has the potential to increase the yield of the essential amino acids in important crops, thus improving their nutritional value. Additionally, since the enzymes are not present in animals, inhibitors of them are promising targets for the development of novel antibiotics and herbicides. For more information see []. Homoserine dehydrogenase (1.1.1.3 from EC) catalyses the third step in the aspartate pathway; theNAD(P)-dependent reduction of aspartate beta-semialdehyde into homoserine [, ]. Homoserine is an intermediate in the biosynthesis of threonine, isoleucine, and methionine. The enzyme can be found in a monofunctional form, in some bacteria and yeast, or a bifunctional form consisting of an N-terminal aspartokinase domain and a C-terminal homoserine dehydrogenase domain, as found in bacteria such as Escherichia coli and in plants. Structural analysis of the yeast monofunctional enzyme (P31116 from SWISSPROT) indicates that the enzyme is a dimer composed of three distinct regions; an N-terminal nucleotide-binding domain, a short central dimerisation region, and a C-terminal catalytic domain []. The N-terminal domain forms a modified Rossman fold, while the catalytic domain forms a novel alpha-beta mixed sheet. This entry represents the NAD(P)-binding domain of aspartate and homoserine dehydrogenase. Asparate dehydrogenase (1.4.1.21 from EC) is strictly specific for L-aspartate as substrate and catalyses the first step in NAD biosynthesis from aspartate. The enzyme has a higher affinity for NAD+ than NADP+ []. Note that the C terminus of the protein contributes a helix to this domain that is not covered by this model.; GO: 0016491 oxidoreductase activity, 0050661 NADP binding, 0055114 oxidation-reduction process; PDB: 3ING_A 3MTJ_A 3DO5_A 3JSA_A 3C8M_A 1J5P_A 1H2H_A 2EJW_E 1TVE_A 1EBU_D ....

>PRK06270 homoserine dehydrogenase; Provisional

Probab=97.92  E-value=5.8e-05  Score=74.69  Aligned_cols=205  Identities=22%  Similarity=0.296  Sum_probs=124.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCC--------CceEEEEEeecC---------CHHHHHHHHHhhCCCEEEEcCchhHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHE--------DKFRVVALAAGS---------NITLLADQVKRFKPQVVAVRNESLLDE  139 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~p--------d~F~VvaLaag~---------Nv~lL~eQ~~~FkP~~V~v~de~~~~~  139 (369)
                      .+|+|+|. |-||+..++.+++++        -+++|++++-.+         |.+.+.+..+++..    +..   +  
T Consensus         3 i~V~IiG~-G~VG~~~~~~L~~~~~~~~~~~g~~~~vvai~d~~~~~~~~~Gi~~~~~~~~~~~~~~----~~~---~--   72 (341)
T PRK06270          3 MKIALIGF-GGVGQGVAELLAEKREYLKKRYGLDLKVVAIADSSGSAIDPDGLDLELALKVKEETGK----LAD---Y--   72 (341)
T ss_pred             EEEEEECC-CHHHHHHHHHHHHhHHHHHHHcCCCEEEEEEEeCCCcccCcCCCCHHHHHHHHhccCC----ccc---C--
Confidence            48999995 999999999998774        269999987532         33333333332210    000   0  


Q ss_pred             HHHHHhcCCCCceEEecHHHHHHHhcCCCCCEEEEeccCc-----cCcHHHHHHHHcCCceeeecccceeecccchhHHh
Q 017567          140 IKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGC-----AGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA  214 (369)
Q Consensus       140 l~~~l~~~~~~~~v~~G~~gl~~~~~~~~~D~Vv~AIvG~-----aGL~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a  214 (369)
                           .      + ......+.++...+++|+||.+..-.     .+..-..+|+++||.|..+||.-+-.-++-+.++|
T Consensus        73 -----~------~-~~~~~d~~ell~~~~~DvVvd~T~s~~~~~~~a~~~~~~aL~~GkhVVtaNK~pla~~~~eL~~~A  140 (341)
T PRK06270         73 -----P------E-GGGEISGLEVIRSVDADVVVEATPTNIETGEPALSHCRKALERGKHVVTSNKGPLALAYKELKELA  140 (341)
T ss_pred             -----c------c-ccccCCHHHHhhccCCCEEEECCcCcccccchHHHHHHHHHHCCCEEEcCCcHHHHhhHHHHHHHH
Confidence                 0      0 00112455667677899999987632     23566789999999999999988887788899999


Q ss_pred             hhcCCeEeeccc---chhhHHHhhcC-CCCCccceEEEeecCCCCCCCChhhh--ccCCHHHhhcCCCCCCC-----Ccc
Q 017567          215 HKHNIKILPADS---EHSAIFQCIQG-LPEGALRRIILTASGGAFRDWPVEKL--KEVKVADALKHPNWSMG-----KKI  283 (369)
Q Consensus       215 ~k~~~~IlPVDS---EHsAIfQ~L~g-~~~~~v~kiiLTASGGPFr~~~~e~l--~~vT~~dALkHP~W~MG-----~KI  283 (369)
                      +++|..+.- .+   -+.-+++.|+. ...+.|.+|.=-=||=  -+|=+.+|  +..+.+|||+- -..+|     +.-
T Consensus       141 ~~~g~~~~~-ea~v~~glPii~~l~~~l~g~~I~~I~GIlnGT--~nyIl~~m~~~g~~f~~al~~-Aq~~G~aE~DP~~  216 (341)
T PRK06270        141 KKNGVRFRY-EATVGGAMPIINLAKETLAGNDIKSIKGILNGT--TNYILTRMEEEGLSYEQALAE-AQELGYAEADPTY  216 (341)
T ss_pred             HHcCCEEEE-eeeeeechhHHHHHHhhcccCceEEEEEEEeCc--HHHHHHHHhhcCCCHHHHHHH-HHHcCCCCCCCCC
Confidence            999987761 10   13345665542 2223455542222221  11224445  67888998862 11122     112


Q ss_pred             ceehhhhcchhHHHhhhhhhcCCCCC
Q 017567          284 TVDSATLFNKGLEVIEAHYLFGAEYD  309 (369)
Q Consensus       284 TIDSATmmNKgLEvIEA~~LF~i~~d  309 (369)
                      -||---...|.  +|=|+.+||.+.+
T Consensus       217 D~~G~D~a~Kl--~Ila~~~~g~~~~  240 (341)
T PRK06270        217 DVEGIDAALKV--VILANSILGADLT  240 (341)
T ss_pred             CCccHHHHHHH--HHHHHHHcCCCCC
Confidence            23333344565  6778888887644

>PRK13303 L-aspartate dehydrogenase; Provisional

Probab=97.92  E-value=8.9e-05  Score=70.93  Aligned_cols=146  Identities=17%  Similarity=0.162  Sum_probs=104.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC-CHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS-NITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~-Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      |.||+|+|. |.||+.-++.+.++|+ ++++++.... +.+...+.   +...                       +.++
T Consensus         1 m~rVgIiG~-G~iG~~~~~~l~~~~~-~~l~~v~~~~~~~~~~~~~---~~~~-----------------------~~~~   52 (265)
T PRK13303          1 MMKVAMIGF-GAIGAAVLELLEHDPD-LRVDWVIVPEHSIDAVRRA---LGEA-----------------------VRVV   52 (265)
T ss_pred             CcEEEEECC-CHHHHHHHHHHhhCCC-ceEEEEEEcCCCHHHHhhh---hccC-----------------------Ceee
Confidence            458999999 9999999999998865 8888877432 32322211   1101                       1122


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeec--ccchhHHhhhcCCeEeecccchhhHH
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAG--GPFVLPLAHKHNIKILPADSEHSAIF  232 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~a--G~li~~~a~k~~~~IlPVDSEHsAIf  232 (369)
                      .   .+.++  ..++|+|+.+..-.+-..-..+++++||.+...+...+.-.  +..+.+.|+++|.+++. +|-.-...
T Consensus        53 ~---d~~~l--~~~~DvVve~t~~~~~~e~~~~aL~aGk~Vvi~s~~Al~d~~~~~~L~~~A~~~g~~l~v-~sga~gg~  126 (265)
T PRK13303         53 S---SVDAL--PQRPDLVVECAGHAALKEHVVPILKAGIDCAVISVGALADEALRERLEQAAEAGGARLHL-LSGAIGGI  126 (265)
T ss_pred             C---CHHHh--ccCCCEEEECCCHHHHHHHHHHHHHcCCCEEEeChHHhcCHHHHHHHHHHHHHCCCEEEE-eChHhhCH
Confidence            1   23344  45799999997776666778999999999999998877533  67788899999987665 77777777


Q ss_pred             HhhcCCCCCccceEEEeecCCCC
Q 017567          233 QCIQGLPEGALRRIILTASGGAF  255 (369)
Q Consensus       233 Q~L~g~~~~~v~kiiLTASGGPF  255 (369)
                      .+|+..+...++.+.+|.-.-|.
T Consensus       127 d~l~~~~~g~~~~v~~~~~k~p~  149 (265)
T PRK13303        127 DALAAAKEGGLDEVTYTGRKPPK  149 (265)
T ss_pred             HHHHHHHhCCceEEEEEEecChh
Confidence            88876666788999998655553

>PRK11579 putative oxidoreductase; Provisional

Probab=97.90  E-value=0.0013  Score=64.32  Aligned_cols=209  Identities=16%  Similarity=0.203  Sum_probs=133.2

Q ss_pred             eeEEEEecCChHhH-HHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGT-QTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGt-qTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      -||+|+|. |.||. ..+..+++.|+ ++|+|++. .|.++..   .+|. .                       +.++ 
T Consensus         5 irvgiiG~-G~i~~~~~~~~~~~~~~-~~l~av~d-~~~~~~~---~~~~-~-----------------------~~~~-   53 (346)
T PRK11579          5 IRVGLIGY-GYASKTFHAPLIAGTPG-LELAAVSS-SDATKVK---ADWP-T-----------------------VTVV-   53 (346)
T ss_pred             ceEEEECC-CHHHHHHHHHHHhhCCC-CEEEEEEC-CCHHHHH---hhCC-C-----------------------Ccee-
Confidence            48999995 99998 46788888775 99999864 5655432   1221 0                       0111 


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeec--ccchhHHhhhcCCeEeec-----ccch
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAG--GPFVLPLAHKHNIKILPA-----DSEH  228 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~a--G~li~~~a~k~~~~IlPV-----DSEH  228 (369)
                        +.+.++.+.+++|.|+.+..=..-..-+.+|+++||.|.. .|-.-...  ..-+.++|+++|..+...     +..+
T Consensus        54 --~~~~ell~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~-EKPla~t~~ea~~l~~~a~~~g~~l~v~~~~R~~p~~  130 (346)
T PRK11579         54 --SEPQHLFNDPNIDLIVIPTPNDTHFPLAKAALEAGKHVVV-DKPFTVTLSQARELDALAKSAGRVLSVFHNRRWDSDF  130 (346)
T ss_pred             --CCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCeEEE-eCCCCCCHHHHHHHHHHHHHhCCEEEEEeeccCCHHH
Confidence              2345667777899999998888888999999999999874 66644433  355678889988776544     4556


Q ss_pred             hhHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhh-hhhhcCCC
Q 017567          229 SAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFGAE  307 (369)
Q Consensus       229 sAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIE-A~~LF~i~  307 (369)
                      ..+-|.++...-.+|..+  ++.-+-++  +  .          ..++|..-+.  -..+.|++-|--.|- ++||||- 
T Consensus       131 ~~~k~~i~~g~iG~i~~~--~~~~~~~~--~--~----------~~~~w~~~~~--~ggG~l~d~g~H~id~~~~l~G~-  191 (346)
T PRK11579        131 LTLKALLAEGVLGEVAYF--ESHFDRFR--P--Q----------VRQRWREQGG--PGSGIWYDLAPHLLDQAIQLFGL-  191 (346)
T ss_pred             HHHHHHHhcCCCCCeEEE--EEEecccC--C--C----------CccccccCCC--CCCcchhhhhhhHHHHHHHHhCC-
Confidence            667777765444445333  33322221  1  0          1245653211  134678888855553 4899996 


Q ss_pred             CCceeEEE---cC----CcceeeeEEeccCcEEEecCC
Q 017567          308 YDNIEIII---HP----QSIIHSMVETQDSSVIGQLGW  338 (369)
Q Consensus       308 ~d~IevvI---HP----qSiIHsmVef~DGSv~Aql~~  338 (369)
                      +.++....   +|    +-..+.+++|.||.+....++
T Consensus       192 ~~~v~a~~~~~~~~~~~~D~~~~~l~f~~g~~~~~~s~  229 (346)
T PRK11579        192 PVSITVDLAQLRPGAQSTDYFHAILSYPQRRVVLHGTM  229 (346)
T ss_pred             CeEEEEEeeeecCCCCCCceEEEEEEECCeEEEEEEEe
Confidence            44555433   23    346688999999877555554

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=97.83  E-value=0.00026  Score=68.08  Aligned_cols=143  Identities=15%  Similarity=0.170  Sum_probs=99.7

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEE
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      .+.||+|+|. |.||+.-.+-+.+....++|+++.. .+.+...+++.++....++                        
T Consensus         5 ~~irIGIIG~-G~IG~~~a~~L~~~~~~~el~aV~d-r~~~~a~~~a~~~g~~~~~------------------------   58 (271)
T PRK13302          5 PELRVAIAGL-GAIGKAIAQALDRGLPGLTLSAVAV-RDPQRHADFIWGLRRPPPV------------------------   58 (271)
T ss_pred             CeeEEEEECc-cHHHHHHHHHHHhcCCCeEEEEEEC-CCHHHHHHHHHhcCCCccc------------------------
Confidence            3579999995 9999998888876434589888754 4677776666666421110                        


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeecccchhHHhhhcCCeE-eecccchhhHHH
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKI-LPADSEHSAIFQ  233 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~~~~I-lPVDSEHsAIfQ  233 (369)
                         ..+.+++.  ++|.|+.+..-.+--.-..+++++||.+...+-.++.- -.-+.+.++++|.++ +|  |=...-|+
T Consensus        59 ---~~~eell~--~~D~Vvi~tp~~~h~e~~~~aL~aGk~Vi~~s~gal~~-~~~L~~~A~~~g~~l~v~--sGa~~g~d  130 (271)
T PRK13302         59 ---VPLDQLAT--HADIVVEAAPASVLRAIVEPVLAAGKKAIVLSVGALLR-NEDLIDLARQNGGQIIVP--TGALLGLD  130 (271)
T ss_pred             ---CCHHHHhc--CCCEEEECCCcHHHHHHHHHHHHcCCcEEEecchhHHh-HHHHHHHHHHcCCEEEEc--chHHHhHH
Confidence               12234443  47999998776655555688999999987644333321 255677889999987 56  77777789


Q ss_pred             hhcCCCCCccceEEEeec
Q 017567          234 CIQGLPEGALRRIILTAS  251 (369)
Q Consensus       234 ~L~g~~~~~v~kiiLTAS  251 (369)
                      +|+......++.+.+|.-
T Consensus       131 ~l~~g~iG~~~~v~~~tr  148 (271)
T PRK13302        131 AVTAAAEGTIHSVKMITR  148 (271)
T ss_pred             HHHHHHcCCceEEEEEEe
Confidence            988766677888988875

>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot

Probab=97.68  E-value=0.00063  Score=55.61  Aligned_cols=112  Identities=19%  Similarity=0.281  Sum_probs=81.0

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEecH
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGE  157 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G~  157 (369)
                      ||+|+|. |++|+.-+.-+.+..++++|+|+. ..+-+...+.+++|.-.  ...                         
T Consensus         2 ~v~iiG~-G~~g~~~~~~~~~~~~~~~v~~v~-d~~~~~~~~~~~~~~~~--~~~-------------------------   52 (120)
T PF01408_consen    2 RVGIIGA-GSIGRRHLRALLRSSPDFEVVAVC-DPDPERAEAFAEKYGIP--VYT-------------------------   52 (120)
T ss_dssp             EEEEEST-SHHHHHHHHHHHHTTTTEEEEEEE-CSSHHHHHHHHHHTTSE--EES-------------------------
T ss_pred             EEEEECC-cHHHHHHHHHHHhcCCCcEEEEEE-eCCHHHHHHHHHHhccc--chh-------------------------
Confidence            7999998 999999999999988889999985 45677776666777654  222                         


Q ss_pred             HHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccc--eeecccchhHHhhhcCCe
Q 017567          158 QGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKET--LIAGGPFVLPLAHKHNIK  220 (369)
Q Consensus       158 ~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEs--LV~aG~li~~~a~k~~~~  220 (369)
                       .+.++.+.+++|.|+.+..--.-...+..++++||.|.+= |=.  =..-..-+.++++++|..
T Consensus        53 -~~~~ll~~~~~D~V~I~tp~~~h~~~~~~~l~~g~~v~~E-KP~~~~~~~~~~l~~~a~~~~~~  115 (120)
T PF01408_consen   53 -DLEELLADEDVDAVIIATPPSSHAEIAKKALEAGKHVLVE-KPLALTLEEAEELVEAAKEKGVK  115 (120)
T ss_dssp             -SHHHHHHHTTESEEEEESSGGGHHHHHHHHHHTTSEEEEE-SSSSSSHHHHHHHHHHHHHHTSC
T ss_pred             -HHHHHHHhhcCCEEEEecCCcchHHHHHHHHHcCCEEEEE-cCCcCCHHHHHHHHHHHHHhCCE
Confidence             1345566568999999999999999999999999977641 111  011123345566666654

GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....

>PRK08374 homoserine dehydrogenase; Provisional

Probab=97.58  E-value=0.00045  Score=68.59  Aligned_cols=126  Identities=21%  Similarity=0.252  Sum_probs=86.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCC--------CceEEEEEeecC---------CHHHHHHHHHhhCCCEEEEcCchhHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHE--------DKFRVVALAAGS---------NITLLADQVKRFKPQVVAVRNESLLDE  139 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~p--------d~F~VvaLaag~---------Nv~lL~eQ~~~FkP~~V~v~de~~~~~  139 (369)
                      -+|+|+| .|.||+.+++++.++.        -+++|++++-.+         +++.+.+..+++..-.          .
T Consensus         3 i~VaIiG-~GnVG~~~~~~L~~~~~~l~~~~G~~l~VvaV~ds~~~~~~~~Gid~~~l~~~~~~~~~~~----------~   71 (336)
T PRK08374          3 VKVSIFG-FGNVGRAVAEVLAEKSRVFKERYGVELKVVSITDTSGTIWLPEDIDLREAKEVKENFGKLS----------N   71 (336)
T ss_pred             eEEEEEC-CCHHHHHHHHHHHHhHHHHHHHcCCCEEEEEEEeCCccccCCCCCChHHHHHhhhccCchh----------h
Confidence            4899999 7999999999998743        248899987422         2222222222221100          0


Q ss_pred             HHHHHhcCCCCceEEecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeecccchhHHhhhcCC
Q 017567          140 IKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNI  219 (369)
Q Consensus       140 l~~~l~~~~~~~~v~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~~~  219 (369)
                      +    .. +...+    .-...++....++|+||+.+.+-..-.-..+++++||.|-.|||..+-.-++-+.++|+++++
T Consensus        72 ~----~~-~~~~~----~~~~~ell~~~~~DVvVd~t~~~~a~~~~~~al~~G~~VVtanK~~la~~~~el~~la~~~~~  142 (336)
T PRK08374         72 W----GN-DYEVY----NFSPEEIVEEIDADIVVDVTNDKNAHEWHLEALKEGKSVVTSNKPPIAFHYDELLDLANERNL  142 (336)
T ss_pred             c----cc-ccccc----CCCHHHHHhcCCCCEEEECCCcHHHHHHHHHHHhhCCcEEECCHHHHHhCHHHHHHHHHHcCC
Confidence            0    00 00000    003456666567999999997766666677899999999999999888888899999999998


Q ss_pred             eEe
Q 017567          220 KIL  222 (369)
Q Consensus       220 ~Il  222 (369)
                      +++
T Consensus       143 ~~~  145 (336)
T PRK08374        143 PYL  145 (336)
T ss_pred             eEE
Confidence            887

>PRK06813 homoserine dehydrogenase; Validated

Probab=97.54  E-value=0.00015  Score=72.76  Aligned_cols=129  Identities=17%  Similarity=0.182  Sum_probs=80.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCC--------ceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHED--------KFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVE  148 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd--------~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~  148 (369)
                      -+|+|+| .|-||+..++++.++.+        +++|++++. ++..++.+-  -+.++. .+........+.+.+.   
T Consensus         3 i~I~liG-~G~VG~~~~~~L~~~~~~l~~~~g~~l~v~~i~~-~~~~~~~~~--gi~~~~-~l~~~~~~~~~~~~~~---   74 (346)
T PRK06813          3 IKVVLSG-YGTVGREFIKLLNEKYLYINETYGIDLVVSGVLG-RNVAIHNED--GLSIHH-LLRYGGGSCAIEKYIE---   74 (346)
T ss_pred             eEEEEEe-cChhHHHHHHHHHHhHHHHHHhcCCcEEEEEEEe-cchhhcccc--CCChhh-hhhccccccchhhhhc---
Confidence            4799999 89999999999987643        578888864 343333210  000000 0000000000011110   


Q ss_pred             CCceEEecHHHHHHHh-cCCCCCEEEEec----cC-ccCcHHHHHHHHcCCceeeecccceeecccchhHHhhhcCCeEe
Q 017567          149 EKPEILAGEQGVIEAA-RHPDAVTVVTGI----VG-CAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKIL  222 (369)
Q Consensus       149 ~~~~v~~G~~gl~~~~-~~~~~D~Vv~AI----vG-~aGL~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~~~~Il  222 (369)
                               .-..++. ...+.|+||...    .| -.+..-..+|+++||.|--|||.-+-.-++-++++|+++|+.++
T Consensus        75 ---------~~~~~~~~~~~~~dVvVe~T~s~~~~~e~a~~~~~~aL~~G~hVVTANK~~la~~~~eL~~lA~~~g~~~~  145 (346)
T PRK06813         75 ---------HHPEERATDNISGTVLVESTVTNLKDGNPGKQYIKQAIEKKMDIVAISKGALVTNWREINEAAKIANVRIR  145 (346)
T ss_pred             ---------cChHHHhcCCCCCCEEEECCCCccCCchHHHHHHHHHHHCCCeEEcCCcHHHhccHHHHHHHHHHcCCeEE
Confidence                     0001222 223689999984    22 34555567899999999999999999999999999999998875

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=97.50  E-value=0.0012  Score=67.42  Aligned_cols=215  Identities=20%  Similarity=0.207  Sum_probs=135.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCC--CEEEEcCchhHHHHHHHHhcCCCCceE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKP--QVVAVRNESLLDEIKEALANVEEKPEI  153 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP--~~V~v~de~~~~~l~~~l~~~~~~~~v  153 (369)
                      |++|.|+|| |-||+.+..-+.++-| ++|..  |.++.+++++......+  +...+ |-                   
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d-~~V~i--AdRs~~~~~~i~~~~~~~v~~~~v-D~-------------------   56 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGD-GEVTI--ADRSKEKCARIAELIGGKVEALQV-DA-------------------   56 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCC-ceEEE--EeCCHHHHHHHHhhccccceeEEe-cc-------------------
Confidence            578999999 9999999999999877 88875  34667777766555433  22222 11                   


Q ss_pred             EecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCc-eeeecccceeecccchhHHhhhcCCeEee---cccchh
Q 017567          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD-IALANKETLIAGGPFVLPLAHKHNIKILP---ADSEHS  229 (369)
Q Consensus       154 ~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~-iaLANKEsLV~aG~li~~~a~k~~~~IlP---VDSEHs  229 (369)
                       .+.+++.++.+.  .|+|++++.++-++.-.-+|+++|.. |=++|.|--.   +.+.+.|++.|..++|   +|-=-+
T Consensus        57 -~d~~al~~li~~--~d~VIn~~p~~~~~~i~ka~i~~gv~yvDts~~~~~~---~~~~~~a~~Agit~v~~~G~dPGi~  130 (389)
T COG1748          57 -ADVDALVALIKD--FDLVINAAPPFVDLTILKACIKTGVDYVDTSYYEEPP---WKLDEEAKKAGITAVLGCGFDPGIT  130 (389)
T ss_pred             -cChHHHHHHHhc--CCEEEEeCCchhhHHHHHHHHHhCCCEEEcccCCchh---hhhhHHHHHcCeEEEcccCcCcchH
Confidence             134566777764  59999999999999999999999988 6688888772   6678899999988887   333222


Q ss_pred             hHHHh--hcCCCCCccceEEEeecCCCCCC-CChhhhccCCHHH---hhcCC--CCCCCCccceehhhhcchhHHHhhhh
Q 017567          230 AIFQC--IQGLPEGALRRIILTASGGAFRD-WPVEKLKEVKVAD---ALKHP--NWSMGKKITVDSATLFNKGLEVIEAH  301 (369)
Q Consensus       230 AIfQ~--L~g~~~~~v~kiiLTASGGPFr~-~~~e~l~~vT~~d---ALkHP--~W~MG~KITIDSATmmNKgLEvIEA~  301 (369)
                      -+|--  .+... .+++.|-+=-=|+|=+. -|+.-=-+-.++.   .+.-|  -|.-|+-++||+       ||..| -
T Consensus       131 nv~a~~a~~~~~-~~i~si~iy~g~~g~~~~~~l~ya~tws~e~~l~e~~~p~~~~~~Gk~~~v~~-------~~~~~-~  201 (389)
T COG1748         131 NVLAAYAAKELF-DEIESIDIYVGGLGEHGDNPLGYATTWSPEINLREYTRPARYWENGKWVEVDP-------LEERE-V  201 (389)
T ss_pred             HHHHHHHHHHhh-ccccEEEEEEecCCCCCCCCccceeeecHHHhHHHhcCceEEEeCCEEEEecC-------ccccc-c
Confidence            22211  11111 15666666555555544 1111111222332   23344  377888888876       45555 2


Q ss_pred             hhcCCC-CCceeEEEcCCcceeeeEEeccCc
Q 017567          302 YLFGAE-YDNIEIIIHPQSIIHSMVETQDSS  331 (369)
Q Consensus       302 ~LF~i~-~d~IevvIHPqSiIHsmVef~DGS  331 (369)
                      +-|..+ +-+....-|++  .|+++++.+|-
T Consensus       202 ~~~~~~G~~~~y~~~~~e--l~sL~~~i~~~  230 (389)
T COG1748         202 FEFPVIGYGDVYAFYHDE--LRSLVKTIPGV  230 (389)
T ss_pred             cccCCCCceeEEecCCcc--HHHHHHhCccc
Confidence            222222 33444444444  58888888865

>PRK06392 homoserine dehydrogenase; Provisional

Probab=97.48  E-value=0.00073  Score=67.22  Aligned_cols=201  Identities=20%  Similarity=0.205  Sum_probs=114.2

Q ss_pred             eEEEEecCChHhHHHHHHHHhC------CCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCc
Q 017567           78 PISVLGSTGSIGTQTLDIVAEH------EDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKP  151 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~------pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~  151 (369)
                      +|+|+| -|.||+.+++++++.      ...++|++++..+ ..+       ++|+-+      +.+++.+.... + ..
T Consensus         2 rVaIiG-fG~VG~~va~~L~~~~~~~~~g~~l~VVaVsds~-g~l-------~~~~Gl------dl~~l~~~~~~-g-~l   64 (326)
T PRK06392          2 RISIIG-LGNVGLNVLRIIKSRNDDRRNNNGISVVSVSDSK-LSY-------YNERGL------DIGKIISYKEK-G-RL   64 (326)
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCHHhHhcCCCeEEEEEEECC-Ccc-------cCCcCC------ChHHHHHHHhc-C-cc
Confidence            799999 699999999999874      3578999987532 111       111111      01111111100 0 00


Q ss_pred             eEEecHH--HHHHHhcCCCCCEEEEeccCc----cCcHHHHHHHHcCCceeeecccceeecccchhHHhhhcCCeEe---
Q 017567          152 EILAGEQ--GVIEAARHPDAVTVVTGIVGC----AGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKIL---  222 (369)
Q Consensus       152 ~v~~G~~--gl~~~~~~~~~D~Vv~AIvG~----aGL~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~~~~Il---  222 (369)
                      ..+ +.+  .+.++.. .++|+||.+..+.    .++.-..+|+++||.|..|||--|...++-++++|+++|+++.   
T Consensus        65 ~~~-~~~~~~~~~ll~-~~~DVvVE~t~~~~~g~~~~~~~~~aL~~G~hVVTaNKgalA~~~~eL~~lA~~~g~~~~~ea  142 (326)
T PRK06392         65 EEI-DYEKIKFDEIFE-IKPDVIVDVTPASKDGIREKNLYINAFEHGIDVVTANKSGLANHWHDIMDSASKNRRIIRYEA  142 (326)
T ss_pred             ccC-CCCcCCHHHHhc-CCCCEEEECCCCCCcCchHHHHHHHHHHCCCEEEcCCHHHHHhhHHHHHHHHHHcCCeEEEee
Confidence            000 001  2344444 5799999998643    2445557899999999999999998888999999999998875   


Q ss_pred             ------ecccchhhHHHhhcCCCCCccceEEEeecCCCCCCCChhhh-ccCCHHHhhcCCCCCCC-----Cccceehhhh
Q 017567          223 ------PADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKL-KEVKVADALKHPNWSMG-----KKITVDSATL  290 (369)
Q Consensus       223 ------PVDSEHsAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l-~~vT~~dALkHP~W~MG-----~KITIDSATm  290 (369)
                            ||=+   .+-.+|.|.+-..|+.| |..+-    ++=+.+| +..+.+|||+.- ..+|     +.--||---.
T Consensus       143 tV~~g~Pii~---~~~~~~~g~~i~~i~Gi-lnGT~----nyIl~~m~~g~~f~~al~eA-q~lG~aE~DP~~Dv~G~D~  213 (326)
T PRK06392        143 TVAGGVPLFS---LRDYSTLPSRIKNFRGI-VSSTI----NYVIRQEANGRGFLDVVKIA-QKMGIAETNYSDDLMGLDA  213 (326)
T ss_pred             eeeeccchhh---hhhhhcccCCEEEEEEE-EeChH----HHHHhhccCCCCHHHHHHHH-HHcCCCCCCCccccCCHHH
Confidence                  6532   34334555443334332 21111    1112233 577778877631 2222     1112222223


Q ss_pred             cchhHHHhhhhhhcCCCC
Q 017567          291 FNKGLEVIEAHYLFGAEY  308 (369)
Q Consensus       291 mNKgLEvIEA~~LF~i~~  308 (369)
                      ..|.  +|=|+.+||.+.
T Consensus       214 a~Kl--~ILa~~~~g~~~  229 (326)
T PRK06392        214 ARKS--VILANHLFGKDY  229 (326)
T ss_pred             HHHH--HHHHHHHcCCCC
Confidence            3444  567777777654

>PRK13304 L-aspartate dehydrogenase; Reviewed

Probab=97.36  E-value=0.0038  Score=59.74  Aligned_cols=145  Identities=18%  Similarity=0.149  Sum_probs=95.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      .||+|+|. |.||+.-..-+.+.+..++++++. .++.+...+.++++...                         ++  
T Consensus         2 mrIgIIG~-G~iG~~ia~~l~~~~~~~elv~v~-d~~~~~a~~~a~~~~~~-------------------------~~--   52 (265)
T PRK13304          2 LKIGIVGC-GAIASLITKAILSGRINAELYAFY-DRNLEKAENLASKTGAK-------------------------AC--   52 (265)
T ss_pred             CEEEEECc-cHHHHHHHHHHHcCCCCeEEEEEE-CCCHHHHHHHHHhcCCe-------------------------eE--
Confidence            58999995 999999888888764368988865 55666665555544321                         11  


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceee--cccchhHHhhhcCCeEeecccchhhHHHh
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIA--GGPFVLPLAHKHNIKILPADSEHSAIFQC  234 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~--aG~li~~~a~k~~~~IlPVDSEHsAIfQ~  234 (369)
                       +.+.++.  .++|+|+.+..-.+-..-+..++++||.+....-..+.-  -..-+.++|+++|.+++. +|---...+.
T Consensus        53 -~~~~ell--~~~DvVvi~a~~~~~~~~~~~al~~Gk~Vvv~s~gAl~d~~~~~~L~~aA~~~g~~l~v-~sga~~g~d~  128 (265)
T PRK13304         53 -LSIDELV--EDVDLVVECASVNAVEEVVPKSLENGKDVIIMSVGALADKELFLKLYKLAKENNCKIYL-PSGAIVGLDG  128 (265)
T ss_pred             -CCHHHHh--cCCCEEEEcCChHHHHHHHHHHHHcCCCEEEEchHHhcCHHHHHHHHHHHHHcCCEEEE-eCchHHhHHH
Confidence             1234454  368999998655555555677999999986633222211  123566789999988774 5533444588


Q ss_pred             hcCCCCCccceEEEeecCCC
Q 017567          235 IQGLPEGALRRIILTASGGA  254 (369)
Q Consensus       235 L~g~~~~~v~kiiLTASGGP  254 (369)
                      |+......++.+.+|..--|
T Consensus       129 i~a~~~G~i~~V~~~~~k~p  148 (265)
T PRK13304        129 IKAASLGEIKSVTLTTRKPP  148 (265)
T ss_pred             HHHHhcCCccEEEEEEecCh
Confidence            87656667888888876555

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.32  E-value=0.0082  Score=68.13  Aligned_cols=195  Identities=17%  Similarity=0.198  Sum_probs=124.7

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceE------------EEEEeecCCHHHHHHHHHhh-CCCEEEEcCchhHHHHH
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFR------------VVALAAGSNITLLADQVKRF-KPQVVAVRNESLLDEIK  141 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~------------VvaLaag~Nv~lL~eQ~~~F-kP~~V~v~de~~~~~l~  141 (369)
                      .+|+|+|+|| |.||....+.+.++|+ ++            ++++ |-.|.+...+.++.+ +.+.+.+ |        
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~-~~~~~~~~~~~~~~lV~V-aD~~~~~a~~la~~~~~~~~v~l-D--------  635 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKT-ISYYGDDSEEPTDVHVIV-ASLYLKDAKETVEGIENAEAVQL-D--------  635 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcC-ccccccccccccccEEEE-ECCCHHHHHHHHHhcCCCceEEe-e--------
Confidence            4789999998 9999999999998876 33            3333 445666655555555 2222222 1        


Q ss_pred             HHHhcCCCCceEEecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeecccchhHHhhhcCCeE
Q 017567          142 EALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKI  221 (369)
Q Consensus       142 ~~l~~~~~~~~v~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~~~~I  221 (369)
                                  +.-.+.+.++.+  ++|.||+++.......-..+|+++||.+.-+.  ..+..-.-+.+.|++.|+.+
T Consensus       636 ------------v~D~e~L~~~v~--~~DaVIsalP~~~H~~VAkaAieaGkHvv~ek--y~~~e~~~L~e~Ak~AGV~~  699 (1042)
T PLN02819        636 ------------VSDSESLLKYVS--QVDVVISLLPASCHAVVAKACIELKKHLVTAS--YVSEEMSALDSKAKEAGITI  699 (1042)
T ss_pred             ------------cCCHHHHHHhhc--CCCEEEECCCchhhHHHHHHHHHcCCCEEECc--CCHHHHHHHHHHHHHcCCEE
Confidence                        112233444443  49999999999999999999999999997774  34445566778899999999


Q ss_pred             ee---cccchhh--HHHhhcCC--CCCccceEEEeecCCC---CCCCChhhhccCCHHHh---hcCC--CCCCCCcccee
Q 017567          222 LP---ADSEHSA--IFQCIQGL--PEGALRRIILTASGGA---FRDWPVEKLKEVKVADA---LKHP--NWSMGKKITVD  286 (369)
Q Consensus       222 lP---VDSEHsA--IfQ~L~g~--~~~~v~kiiLTASGGP---Fr~~~~e~l~~vT~~dA---LkHP--~W~MG~KITID  286 (369)
                      +|   .|.-...  .-+++...  ....|..+....=|=|   +-+=++.---.-+|+.+   ...|  -|.-|+.++||
T Consensus       700 m~e~GlDPGid~~lA~~~Id~~~~~~GkI~s~~s~~GGLP~pe~~~npL~YkfsWSp~gvi~~~~npa~~i~~G~~~~V~  779 (1042)
T PLN02819        700 LCEMGLDPGIDHMMAMKMIDDAHERGGKVKSFTSYCGGLPSPEAANNPLAYKFSWNPAGAIKAGQNPAVYKSNGQIIHVD  779 (1042)
T ss_pred             EECCccCHHHHHHHHHHHHHhhcccCCcEEEEEEEEcCccCcccCCCcccccccCCHHHHHHHhcCcceeeECCEEEEec
Confidence            88   4544444  34555432  2245665555554445   22222222222334333   3344  37789999999


Q ss_pred             hhhhcchhHHH
Q 017567          287 SATLFNKGLEV  297 (369)
Q Consensus       287 SATmmNKgLEv  297 (369)
                      ...||...-++
T Consensus       780 ~~~l~~~~~~~  790 (1042)
T PLN02819        780 GENLFASAVRF  790 (1042)
T ss_pred             chhhhhhcccc
Confidence            99887766443

>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]

Probab=97.19  E-value=0.0032  Score=60.01  Aligned_cols=210  Identities=17%  Similarity=0.220  Sum_probs=138.4

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEE
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      .+.||+|+|+.|..+..-+..+++.++.++++++. ..|.+++.+.+++|....++                        
T Consensus         2 ~~irvgiiG~G~~~~~~~~~~~~~~~~~~~~vav~-d~~~~~a~~~a~~~~~~~~~------------------------   56 (342)
T COG0673           2 KMIRVGIIGAGGIAGKAHLPALAALGGGLELVAVV-DRDPERAEAFAEEFGIAKAY------------------------   56 (342)
T ss_pred             CeeEEEEEcccHHHHHHhHHHHHhCCCceEEEEEe-cCCHHHHHHHHHHcCCCccc------------------------
Confidence            45699999999888888999999887667888865 56889999999999865211                        


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceee------ecccceeecccchhHHhhhcCCeEee-----
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIAL------ANKETLIAGGPFVLPLAHKHNIKILP-----  223 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaL------ANKEsLV~aG~li~~~a~k~~~~IlP-----  223 (369)
                         +.+.++.+.+++|.|+.+..=..=...+++|+++||.|..      -=.|     ..-+.++|+++|..+.-     
T Consensus        57 ---~~~~~ll~~~~iD~V~Iatp~~~H~e~~~~AL~aGkhVl~EKPla~t~~e-----a~~l~~~a~~~~~~l~v~~~~R  128 (342)
T COG0673          57 ---TDLEELLADPDIDAVYIATPNALHAELALAALEAGKHVLCEKPLALTLEE-----AEELVELARKAGVKLMVGFNRR  128 (342)
T ss_pred             ---CCHHHHhcCCCCCEEEEcCCChhhHHHHHHHHhcCCEEEEcCCCCCCHHH-----HHHHHHHHHHcCCceeeehhhh
Confidence               1235667777899999999999999999999999987643      2223     33466788888755432     


Q ss_pred             cccchhhHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhh-hhh
Q 017567          224 ADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHY  302 (369)
Q Consensus       224 VDSEHsAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIE-A~~  302 (369)
                      =|.-+.++-++|....-..|..+-.+.+.....              .-..+.|.+..+-.=  +.++..|.-.|- ++|
T Consensus       129 f~p~~~~~k~li~~g~lG~v~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~g--G~l~d~giH~lD~~~~  192 (342)
T COG0673         129 FDPAVQALKELIDSGALGEVVSVQASFSRDRPN--------------PPPPPWWRFDRADGG--GALLDLGIHDLDLLRF  192 (342)
T ss_pred             cCHHHHHHHHHHhcCCcCceEEEEEEeeccccc--------------cCCccceecccccCC--CchhhhHHHHHHHHHH
Confidence            244455555555554445565555554433221              122344444333222  456666666554 678


Q ss_pred             hcCC-CCCceeEEEcCC--------cceeeeEEeccCcEE
Q 017567          303 LFGA-EYDNIEIIIHPQ--------SIIHSMVETQDSSVI  333 (369)
Q Consensus       303 LF~i-~~d~IevvIHPq--------SiIHsmVef~DGSv~  333 (369)
                      |||- ++..+.+..+..        -..+.+.+|.||..-
T Consensus       193 l~G~~~~~~v~a~~~~~~~~~~~~~d~~~~~l~~~~g~~~  232 (342)
T COG0673         193 LLGSPEPVSVSAKARNSPPGEAGVDDSASAILRFENGVLA  232 (342)
T ss_pred             HcCCcchhheeeecccCCCCcccccceEEEEEEecCCceE
Confidence            8887 466777766532        346777777774443

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=97.16  E-value=0.0063  Score=60.19  Aligned_cols=186  Identities=17%  Similarity=0.119  Sum_probs=102.9

Q ss_pred             EEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh-CCCEEEE-cCchhHHHHHHHHhcCCCCceEEec
Q 017567           79 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF-KPQVVAV-RNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        79 I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F-kP~~V~v-~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      |.|||+ |.+|+.+++.+.++++..+  -+.+++|.+++.+.+.++ ..+.-.+ .|-.                    .
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~--v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~--------------------~   57 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEE--VTVADRNPEKAERLAEKLLGDRVEAVQVDVN--------------------D   57 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-E--EEEEESSHHHHHHHHT--TTTTEEEEE--TT--------------------T
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCc--EEEEECCHHHHHHHHhhccccceeEEEEecC--------------------C
Confidence            789999 9999999999999865333  334678999998888763 2233222 1111                    2


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccce-eecccchhHHhhhcCCeEee---cccc---hh
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL-IAGGPFVLPLAHKHNIKILP---ADSE---HS  229 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsL-V~aG~li~~~a~k~~~~IlP---VDSE---Hs  229 (369)
                      .+.+.++++.  .|+|||+...+.+..-..+|+++|....=   -+. ...=.-+.+.+++.|..+++   .|+=   .-
T Consensus        58 ~~~l~~~~~~--~dvVin~~gp~~~~~v~~~~i~~g~~yvD---~~~~~~~~~~l~~~a~~~g~~~l~~~G~~PGl~~~~  132 (386)
T PF03435_consen   58 PESLAELLRG--CDVVINCAGPFFGEPVARACIEAGVHYVD---TSYVTEEMLALDEEAKEAGVTALPGCGFDPGLSNLL  132 (386)
T ss_dssp             HHHHHHHHTT--SSEEEE-SSGGGHHHHHHHHHHHT-EEEE---SS-HHHHHHHCHHHHHHTTSEEE-S-BTTTBHHHHH
T ss_pred             HHHHHHHHhc--CCEEEECCccchhHHHHHHHHHhCCCeec---cchhHHHHHHHHHHHHhhCCEEEeCcccccchHHHH
Confidence            3446666654  69999999888888889999999987544   111 11112334577788888875   3332   22


Q ss_pred             hH--HHhhcCCCCCccceEEEeecCCCCCCCChhh---hccCCHHHhhcC-----CCCCCCCccceehhhhcch
Q 017567          230 AI--FQCIQGLPEGALRRIILTASGGAFRDWPVEK---LKEVKVADALKH-----PNWSMGKKITVDSATLFNK  293 (369)
Q Consensus       230 AI--fQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~---l~~vT~~dALkH-----P~W~MG~KITIDSATmmNK  293 (369)
                      |-  .|.|.+ ....++.+.+...|-|.-.++...   --.-+++..|..     ..|.-|+.+.++..+...+
T Consensus       133 a~~~~~~~~~-~~~~v~~~~~~~g~~~~p~~~~~~~~~~~~ws~~~~l~e~~~~~~~~~~G~~~~v~~~~~~~~  205 (386)
T PF03435_consen  133 ARYAADELDA-EGDEVESVDIYVGGLPAPEAPDNPLGYKFTWSPEGVLEEYSPPARVYRDGKWVEVPPFSEEER  205 (386)
T ss_dssp             HHHHHHHHHH-TTHEEEEEEEEEEEEEEGCG--TTTSEEBSS-HHHHHHHHCS-EEEEETTEEEEEETTTTCCC
T ss_pred             HHHHHHHhhh-hcccceEEEEEEccccCCCCCCCCcccceeeeehhhHHhhcccceEeeCCEEEEecCccccce
Confidence            21  122221 123577777655555111111111   112333333332     2577788888887765543

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating)

Probab=97.11  E-value=0.007  Score=59.48  Aligned_cols=158  Identities=19%  Similarity=0.263  Sum_probs=89.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC-CHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS-NITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~-Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .+|+|+|+ |.||+.-+.-+.+. +++++++++... +.+.+ +.++++.-.                         ..+
T Consensus         2 lrVAIIG~-G~IG~~h~~~ll~~-~~~elvaV~d~d~es~~l-a~A~~~Gi~-------------------------~~~   53 (285)
T TIGR03215         2 VKVAIIGS-GNIGTDLMYKLLRS-EHLEMVAMVGIDPESDGL-ARARELGVK-------------------------TSA   53 (285)
T ss_pred             cEEEEEeC-cHHHHHHHHHHHhC-CCcEEEEEEeCCcccHHH-HHHHHCCCC-------------------------EEE
Confidence            47999996 99999886655554 469999987642 21222 234444321                         111


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeecccchhHH-----h-hhcCCeEeec-ccch
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPL-----A-HKHNIKILPA-DSEH  228 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~-----a-~k~~~~IlPV-DSEH  228 (369)
                        ++..++.+++++|.|+.+.....-..-..+|+++||.+. -+|-.-  -|+|+-+.     + ...+.+++-. ..-.
T Consensus        54 --~~~e~ll~~~dIDaV~iaTp~~~H~e~a~~al~aGk~VI-dekPa~--~~plvvp~VN~~~~~~~~~~~iv~c~~~at  128 (285)
T TIGR03215        54 --EGVDGLLANPDIDIVFDATSAKAHARHARLLAELGKIVI-DLTPAA--IGPYVVPAVNLDEHLDAPNVNMVTCGGQAT  128 (285)
T ss_pred             --CCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHcCCEEE-ECCccc--cCCccCCCcCHHHHhcCcCCCEEEcCcHHH
Confidence              123444556789999999999999999999999999873 233322  23444221     1 1122333322 2222


Q ss_pred             hhHHHhhcCC---CCCccceEEEeecCCCCCCCChhhhccCC
Q 017567          229 SAIFQCIQGL---PEGALRRIILTASGGAFRDWPVEKLKEVK  267 (369)
Q Consensus       229 sAIfQ~L~g~---~~~~v~kiiLTASGGPFr~~~~e~l~~vT  267 (369)
                      ..+...|+-.   ...+|-.-+-..|+||...-..++|..-|
T Consensus       129 ip~~~al~r~~d~~~~~iv~ti~s~S~g~g~r~~idel~~~t  170 (285)
T TIGR03215       129 IPIVAAISRVAPVHYAEIVASIASRSAGPGTRANIDEFTETT  170 (285)
T ss_pred             HHHHHHHHHhhccccEEEEEEEEeeccCCCchhHHHHHHHHH
Confidence            2333333321   11122233466788996545556666444

Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.

>TIGR01761 thiaz-red thiazolinyl imide reductase

Probab=97.07  E-value=0.0033  Score=63.04  Aligned_cols=127  Identities=18%  Similarity=0.186  Sum_probs=90.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      +.||+|+|+ |+ |..=++.+++.|++++|+|++. .+.++..+.+++|.-..        |                  
T Consensus         3 ~~rVgViG~-~~-G~~h~~al~~~~~~~eLvaV~d-~~~erA~~~A~~~gi~~--------y------------------   53 (343)
T TIGR01761         3 VQSVVVCGT-RF-GQFYLAAFAAAPERFELAGILA-QGSERSRALAHRLGVPL--------Y------------------   53 (343)
T ss_pred             CcEEEEEeH-HH-HHHHHHHHHhCCCCcEEEEEEc-CCHHHHHHHHHHhCCCc--------c------------------
Confidence            569999999 75 9999999999988899999876 46888888888887321        1                  


Q ss_pred             cHHHHHHHhcCCCCCEEEE--eccCccCcHHHHHHHHcCCceeeecccceeecccchhHHhhhcCCeEeecccchhhHHH
Q 017567          156 GEQGVIEAARHPDAVTVVT--GIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQ  233 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~--AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~~~~IlPVDSEHsAIfQ  233 (369)
                        ..+.++....++|.|..  +..+..+-.-+.+|+++||.|.. =|=.-..-+.-+.++|+++|..+. | ..++--++
T Consensus        54 --~~~eell~d~Di~~V~ipt~~P~~~H~e~a~~aL~aGkHVL~-EKPla~~Ea~el~~~A~~~g~~l~-v-~~f~p~~~  128 (343)
T TIGR01761        54 --CEVEELPDDIDIACVVVRSAIVGGQGSALARALLARGIHVLQ-EHPLHPRDIQDLLRLAERQGRRYL-V-NTFYPHLP  128 (343)
T ss_pred             --CCHHHHhcCCCEEEEEeCCCCCCccHHHHHHHHHhCCCeEEE-cCCCCHHHHHHHHHHHHHcCCEEE-E-EecCHHHH
Confidence              12245555556666666  33577889999999999998753 121112345667788999888776 4 34555555


Q ss_pred             hhc
Q 017567          234 CIQ  236 (369)
Q Consensus       234 ~L~  236 (369)
                      .++
T Consensus       129 ~vr  131 (343)
T TIGR01761       129 AVR  131 (343)
T ss_pred             HHH
Confidence            554

This reductase is found associated with gene clusters for the biosynthesis of various non-ribosomal peptide derived natural products in which cysteine is cyclized to a thiazoline ring containing an imide double bond. Examples include yersiniabactin (irp3/YbtU) and pyochelin (PchG).

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.02  E-value=0.0013  Score=55.47  Aligned_cols=35  Identities=40%  Similarity=0.768  Sum_probs=32.8

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN  113 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~N  113 (369)
                      ||+|+|+||.+|+..++.+.+||+ |+++.+...++
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~-~e~~~~~~~~~   35 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPD-FELVALVSSSR   35 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTST-EEEEEEEESTT
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCC-ccEEEeeeecc
Confidence            699999999999999999999876 99999999887

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK09466 metL bifunctional aspartate kinase II/homoserine dehydrogenase II; Provisional

Probab=96.81  E-value=0.0056  Score=67.70  Aligned_cols=127  Identities=16%  Similarity=0.100  Sum_probs=82.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCC--------ceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHED--------KFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVE  148 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd--------~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~  148 (369)
                      -+|+|+| .|.||+..++++.++.+        +++|++++. ++..++       +|+-+   +   ...+.+.+....
T Consensus       459 i~i~l~G-~G~VG~~l~~~l~~~~~~l~~~~g~~~~v~~I~~-s~~~~~-------~~~gi---~---~~~~~~~~~~~~  523 (810)
T PRK09466        459 IGLVLFG-KGNIGSRWLELFAREQSTLSARTGFEFVLVGVVD-SRRSLL-------NYDGL---D---ASRALAFFDDEA  523 (810)
T ss_pred             EEEEEEe-cCCChHHHHHHHHHHHHHHHHhcCCCEEEEEEEe-CCcccc-------CccCC---C---HHHHHhhHHhhc
Confidence            4899999 79999999999987643        588999864 332211       12111   1   111111111100


Q ss_pred             CCceEEecHHHHHHHhcCCC--CCEEEEeccCccCcHHHHHHHHcCCceeeecccc---eeecccchhHHhhhcCCeEe
Q 017567          149 EKPEILAGEQGVIEAARHPD--AVTVVTGIVGCAGLKPTVAAIEAGKDIALANKET---LIAGGPFVLPLAHKHNIKIL  222 (369)
Q Consensus       149 ~~~~v~~G~~gl~~~~~~~~--~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEs---LV~aG~li~~~a~k~~~~Il  222 (369)
                      ..    ...+.+.+.....+  .++||....|-.......+|+++||.|-.|||..   ...-++-++++|+++|+.++
T Consensus       524 ~~----~~~~~~~e~i~~~~~~~~vvVd~t~~~~~~~~~~~aL~~G~~VVtaNK~~~a~~~~~~~~l~~~a~~~~~~~~  598 (810)
T PRK09466        524 VE----WDEESLFLWLRAHPYDELVVLDVTASEQLALQYPDFASHGFHVISANKLAGSSPSNFYRQIKDAFAKTGRHWL  598 (810)
T ss_pred             CC----ccHHHHHHHHhhcCCCCcEEEECCCChHHHHHHHHHHHcCCEEEcCCcccccccHHHHHHHHHHHHHcCCeEE
Confidence            00    12244455554333  4699999988766666679999999999999984   34677888899999998763

>PRK10206 putative oxidoreductase; Provisional

Probab=96.77  E-value=0.12  Score=51.12  Aligned_cols=200  Identities=19%  Similarity=0.258  Sum_probs=118.4

Q ss_pred             eeEEEEecCChHhHH-HHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQ-TLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtq-TLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      -||+|+|. |.|+.. -+..+.+.+++++|+|++-. |-+. .+.+.+|.-.                        .+  
T Consensus         2 irvgiiG~-G~~~~~~h~~~~~~~~~~~~l~av~d~-~~~~-~~~~~~~~~~------------------------~~--   52 (344)
T PRK10206          2 INCAFIGF-GKSTTRYHLPYVLNRKDSWHVAHIFRR-HAKP-EEQAPIYSHI------------------------HF--   52 (344)
T ss_pred             eEEEEECC-CHHHhheehhhHhcCCCCEEEEEEEcC-ChhH-HHHHHhcCCC------------------------cc--
Confidence            47999997 666654 46766666778999998764 4333 3444444310                        01  


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccce--eecccchhHHhhhcCCeEeec-----ccch
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILPA-----DSEH  228 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsL--V~aG~li~~~a~k~~~~IlPV-----DSEH  228 (369)
                       -..+.++.+.+++|.|+.+..=..=..-+.+|+++||.|.+ -|=.-  +.-..-+.++++++|..+..-     +..+
T Consensus        53 -~~~~~ell~~~~iD~V~I~tp~~~H~~~~~~al~aGkhVl~-EKPla~~~~ea~~l~~~a~~~~~~l~v~~~~R~~p~~  130 (344)
T PRK10206         53 -TSDLDEVLNDPDVKLVVVCTHADSHFEYAKRALEAGKNVLV-EKPFTPTLAEAKELFALAKSKGLTVTPYQNRRFDSCF  130 (344)
T ss_pred             -cCCHHHHhcCCCCCEEEEeCCchHHHHHHHHHHHcCCcEEE-ecCCcCCHHHHHHHHHHHHHhCCEEEEEEeeeECHHH
Confidence             12345667777899999998877778889999999998875 44332  223466778899999876542     3344


Q ss_pred             hhHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhh-hhhhcCCC
Q 017567          229 SAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFGAE  307 (369)
Q Consensus       229 sAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIE-A~~LF~i~  307 (369)
                      ..+-++|+...-.+|..+-  +.=+.||..+.            ..|.+       -+.+.|++-|--.|- +.|||| +
T Consensus       131 ~~~k~li~~g~iG~i~~i~--~~~~~~~~~~~------------~~~~~-------~~gG~l~d~g~H~ld~~~~l~G-~  188 (344)
T PRK10206        131 LTAKKAIESGKLGEIVEVE--SHFDYYRPVAE------------TKPGL-------PQDGAFYGLGVHTMDQIISLFG-R  188 (344)
T ss_pred             HHHHHHHHcCCCCCeEEEE--EEecccCCccc------------cccCC-------CCCceeechhHHHHHHHHHHcC-C
Confidence            5666677654444554333  32222332110            01111       122345555544443 478888 4


Q ss_pred             CCceeEEEc-------CCcceeeeEEecc
Q 017567          308 YDNIEIIIH-------PQSIIHSMVETQD  329 (369)
Q Consensus       308 ~d~IevvIH-------PqSiIHsmVef~D  329 (369)
                      ++++.....       .+-..+.+++|.+
T Consensus       189 ~~~v~a~~~~~~~~~~~~d~~~~~l~f~~  217 (344)
T PRK10206        189 PDHVAYDIRSLRNKANPDDTFEAQLFYGD  217 (344)
T ss_pred             CeEEEEEeecccCCCCCCceEEEEEEeCC
Confidence            556655432       2345677888843

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=96.68  E-value=0.0089  Score=54.32  Aligned_cols=98  Identities=21%  Similarity=0.246  Sum_probs=60.4

Q ss_pred             EEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec--
Q 017567           79 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG--  156 (369)
Q Consensus        79 I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G--  156 (369)
                      |+|+|+||.+|.+.++.+.+  ..|+|.+|+=..+ ....++.+.-. -.++..|-.+.+.|.++|.+.+. +-+..+  
T Consensus         1 I~V~GatG~~G~~v~~~L~~--~~~~V~~l~R~~~-~~~~~~l~~~g-~~vv~~d~~~~~~l~~al~g~d~-v~~~~~~~   75 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLS--AGFSVRALVRDPS-SDRAQQLQALG-AEVVEADYDDPESLVAALKGVDA-VFSVTPPS   75 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHH--TTGCEEEEESSSH-HHHHHHHHHTT-TEEEES-TT-HHHHHHHHTTCSE-EEEESSCS
T ss_pred             CEEECCccHHHHHHHHHHHh--CCCCcEEEEeccc-hhhhhhhhccc-ceEeecccCCHHHHHHHHcCCce-EEeecCcc
Confidence            78999999999999999998  6799999985543 33444445444 34557777777778877765431 112222  


Q ss_pred             -------HHHHHHHhcCCCCCEEEEeccCccC
Q 017567          157 -------EQGVIEAARHPDAVTVVTGIVGCAG  181 (369)
Q Consensus       157 -------~~gl~~~~~~~~~D~Vv~AIvG~aG  181 (369)
                             ...+++.+....++.+|-.-.|...
T Consensus        76 ~~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~  107 (233)
T PF05368_consen   76 HPSELEQQKNLIDAAKAAGVKHFVPSSFGADY  107 (233)
T ss_dssp             CCCHHHHHHHHHHHHHHHT-SEEEESEESSGT
T ss_pred             hhhhhhhhhhHHHhhhccccceEEEEEecccc
Confidence                   1235555554456666654444444

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=96.58  E-value=0.014  Score=58.09  Aligned_cols=110  Identities=21%  Similarity=0.185  Sum_probs=72.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      |.||+|.|. |.||+..++.+.++| .|+|+|+... +.+..+.+++++.-+. ....+...+    .+.+  .++.+ .
T Consensus         1 ~ikVaI~G~-GrIGr~va~al~~~~-d~eLvav~d~-~~~~~~~la~~~G~~~-~~~~~~~~~----~~~~--~~i~V-~   69 (341)
T PRK04207          1 MIKVGVNGY-GTIGKRVADAVAAQP-DMELVGVAKT-KPDYEARVAVEKGYPL-YVADPEREK----AFEE--AGIPV-A   69 (341)
T ss_pred             CeEEEEECC-CHHHHHHHHHHhcCC-CcEEEEEECC-ChHHHHHHHHhcCCCc-cccCccccc----cccC--CceEE-c
Confidence            358999999 999999999999875 5999999874 4666666666553221 111111110    0111  11223 1


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecc
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANK  200 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANK  200 (369)
                      |  ...++.  .++|+|+.+.....+..-...++++||.+..-.-
T Consensus        70 ~--~~~el~--~~vDVVIdaT~~~~~~e~a~~~~~aGk~VI~~~~  110 (341)
T PRK04207         70 G--TIEDLL--EKADIVVDATPGGVGAKNKELYEKAGVKAIFQGG  110 (341)
T ss_pred             C--ChhHhh--ccCCEEEECCCchhhHHHHHHHHHCCCEEEEcCC
Confidence            2  133444  2599999999999999999999999988766553

>PRK08300 acetaldehyde dehydrogenase; Validated

Probab=96.58  E-value=0.013  Score=58.30  Aligned_cols=160  Identities=14%  Similarity=0.204  Sum_probs=99.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHH-HHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITL-LADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~l-L~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      +.||+|+| ||.||+.-+.-+.+. +.+++++++.. |.+. ..+.+++|.-...                        +
T Consensus         4 klrVAIIG-tG~IGt~hm~~l~~~-~~velvAVvdi-d~es~gla~A~~~Gi~~~------------------------~   56 (302)
T PRK08300          4 KLKVAIIG-SGNIGTDLMIKILRS-EHLEPGAMVGI-DPESDGLARARRLGVATS------------------------A   56 (302)
T ss_pred             CCeEEEEc-CcHHHHHHHHHHhcC-CCcEEEEEEeC-ChhhHHHHHHHHcCCCcc------------------------c
Confidence            45899999 999999867666664 56999998765 3332 2244666542211                        1


Q ss_pred             ecHHHHHHHhcC---CCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeecccchhHHh------hhcCCeEeec-
Q 017567          155 AGEQGVIEAARH---PDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA------HKHNIKILPA-  224 (369)
Q Consensus       155 ~G~~gl~~~~~~---~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a------~k~~~~IlPV-  224 (369)
                         +++.++.++   +++|+|+.+.....-..-...++++||.+. -||=..  -|+|+.+..      ...+.+|+-. 
T Consensus        57 ---~~ie~LL~~~~~~dIDiVf~AT~a~~H~e~a~~a~eaGk~VI-D~sPA~--~~PlvVP~VN~~~~~~~~~~~iia~p  130 (302)
T PRK08300         57 ---EGIDGLLAMPEFDDIDIVFDATSAGAHVRHAAKLREAGIRAI-DLTPAA--IGPYCVPAVNLDEHLDAPNVNMVTCG  130 (302)
T ss_pred             ---CCHHHHHhCcCCCCCCEEEECCCHHHHHHHHHHHHHcCCeEE-ECCccc--cCCcccCcCCHHHHhcccCCCEEECc
Confidence               123334444   679999999999888888999999998754 444443  467775432      1223333311 


Q ss_pred             ccchhhHHHhhcCCCCCccceEEE---eecCCCCCCCChhhhccCCH
Q 017567          225 DSEHSAIFQCIQGLPEGALRRIIL---TASGGAFRDWPVEKLKEVKV  268 (369)
Q Consensus       225 DSEHsAIfQ~L~g~~~~~v~kiiL---TASGGPFr~~~~e~l~~vT~  268 (369)
                      ..--..+...|.-....+..+|+-   ..|=||.+.-..|||..-|-
T Consensus       131 ~~ati~~v~Al~~v~~~~~~eIvat~~s~s~g~gtr~nidE~~~~t~  177 (302)
T PRK08300        131 GQATIPIVAAVSRVAPVHYAEIVASIASKSAGPGTRANIDEFTETTS  177 (302)
T ss_pred             cHHHHHHHHHhcccCcCceeeeeeeehhhccCCcccccHHHHHHHHH
Confidence            222233444444433446778883   24569998788888876553

>COG0460 ThrA Homoserine dehydrogenase [Amino acid transport and metabolism]

Probab=96.57  E-value=0.0038  Score=62.84  Aligned_cols=120  Identities=27%  Similarity=0.297  Sum_probs=82.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCC--------ceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHED--------KFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVE  148 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd--------~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~  148 (369)
                      -+|+|+| .|-||+..+++++++.+        .|+|++++..+ ..+..    .+....        +..+++...   
T Consensus         4 v~v~l~G-~G~VG~~~~~il~~~~~~l~~~~g~~i~v~~v~~~~-~~~~~----~~~~~~--------~~~~~~~~~---   66 (333)
T COG0460           4 VKVGLLG-LGTVGSGVLEILAEKQEELRKRAGIEIRVVAVADRD-GSLVR----DLDLLN--------AEVWTTDGA---   66 (333)
T ss_pred             EEEEEEc-cCchhHHHHHHHHHhHHHHHhhcCCceEEEEEEecc-chhcc----cccccc--------hhhheeccc---
Confidence            4899999 58899999999998754        56777766543 22221    111100        001111000   


Q ss_pred             CCceEEecHHHHHHHhcCCCCCEEEEeccC-ccCc---HHHHHHHHcCCceeeecccceeecccchhHHhhhcCCeE
Q 017567          149 EKPEILAGEQGVIEAARHPDAVTVVTGIVG-CAGL---KPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKI  221 (369)
Q Consensus       149 ~~~~v~~G~~gl~~~~~~~~~D~Vv~AIvG-~aGL---~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~~~~I  221 (369)
                        ..     .+ .+++...++|+||.++.| +..=   .-..+|+++||.|--|||--|-.-|.-|++.|+++|+.+
T Consensus        67 --~~-----~~-~~~~~~~~~dvvve~~~~d~~~~~~~~~~~~al~~GkhVVTaNK~~lA~~~~el~~~A~~~g~~l  135 (333)
T COG0460          67 --LS-----LG-DEVLLDEDIDVVVELVGGDVEPAEPADLYLKALENGKHVVTANKALLALHYHELREAAEKNGVKL  135 (333)
T ss_pred             --cc-----cc-HhhhccccCCEEEecCcccCCchhhHHHHHHHHHcCCeEECCCchHhHhhHHHHHHHHHHhCCeE
Confidence              00     11 345566789999999999 5444   457789999999999999999999999999999999876

>PRK09436 thrA bifunctional aspartokinase I/homoserine dehydrogenase I; Provisional

Probab=96.53  E-value=0.013  Score=64.86  Aligned_cols=129  Identities=21%  Similarity=0.206  Sum_probs=85.9

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCC-------ceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcC
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHED-------KFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANV  147 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd-------~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~  147 (369)
                      .+.+|+|+| .|-||.+.++++.+..+       +++|++++. ++..+       |.|+-+   +   ...+++.+...
T Consensus       464 ~~~~i~l~G-~G~VG~~~~~~l~~~~~~l~~~~~~l~v~~i~~-s~~~~-------~~~~g~---~---~~~~~~~~~~~  528 (819)
T PRK09436        464 QVLDVFVIG-VGGVGGALLEQIKRQQPWLKKKNIDLRVCGIAN-SRKML-------LDEHGI---D---LDNWREELAEA  528 (819)
T ss_pred             ccccEEEEe-cCHHHHHHHHHHHHHHHHHHhcCCcEEEEEEEc-CCccc-------cCCCCC---C---HHHHHHHHhhc
Confidence            346899999 79999999999987653       577888753 32111       222211   1   12333332211


Q ss_pred             CCCceEEecHHHHHHHhcC--CCCCEEEEeccCccCcHHHHHHHHcCCceeeeccccee---ecccchhHHhhhcCCeEe
Q 017567          148 EEKPEILAGEQGVIEAARH--PDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLI---AGGPFVLPLAHKHNIKIL  222 (369)
Q Consensus       148 ~~~~~v~~G~~gl~~~~~~--~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV---~aG~li~~~a~k~~~~Il  222 (369)
                      .    -..+.+.+.+....  .+.|+||....+..-..-..+|+++||.|-.|||.-+.   .-++-++++|+++|+.++
T Consensus       529 ~----~~~~~~~~~~~~~~~~~~~~vvvd~t~~~~~~~~~~~al~~g~~VVtaNK~~~a~~~~~~~el~~~a~~~~~~~~  604 (819)
T PRK09436        529 G----EPFDLDRLIRLVKEYHLLNPVIVDCTSSQAVADQYADFLAAGFHVVTPNKKANTSSYAYYHQLREAARKSRRKFL  604 (819)
T ss_pred             c----CCCCHHHHHHHHhhcCCCCCEEEECCCChHHHHHHHHHHHcCCEEEcCCchhccCCHHHHHHHHHHHHHcCCeEE
Confidence            1    11234455555432  25799999998865444556999999999999999887   367888999999998876

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=96.47  E-value=0.0058  Score=60.74  Aligned_cols=92  Identities=17%  Similarity=0.262  Sum_probs=57.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHH-HHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNIT-LLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~-lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      ++||+|+|+||.+|+..++.+.++|+ +++++++.++... .+.+.    .|....+.+                 ..+-
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~-~elv~v~~~~~~g~~l~~~----~~~~~~~~~-----------------~~~~   59 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPE-VEIVAVTSRSSAGKPLSDV----HPHLRGLVD-----------------LVLE   59 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCC-ceEEEEECccccCcchHHh----CcccccccC-----------------ceee
Confidence            46899999999999999999999875 8999988744322 22222    121110000                 0000


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCc
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~  194 (369)
                          .+.+.. ..++|.|+.+...-.-.....+++++|+.
T Consensus        60 ----~~~~~~-~~~vD~Vf~alP~~~~~~~v~~a~~aG~~   94 (343)
T PRK00436         60 ----PLDPEI-LAGADVVFLALPHGVSMDLAPQLLEAGVK   94 (343)
T ss_pred             ----cCCHHH-hcCCCEEEECCCcHHHHHHHHHHHhCCCE
Confidence                001111 23588888888877777777777788764

>COG4091 Predicted homoserine dehydrogenase [Amino acid transport and metabolism]

Probab=96.33  E-value=0.046  Score=56.15  Aligned_cols=156  Identities=19%  Similarity=0.257  Sum_probs=107.0

Q ss_pred             CCCCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH-hhCCCEEEEcCchhHHHHHHHHhcCCC
Q 017567           71 KTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK-RFKPQVVAVRNESLLDEIKEALANVEE  149 (369)
Q Consensus        71 ~~~~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~-~FkP~~V~v~de~~~~~l~~~l~~~~~  149 (369)
                      ..-+.|-||.++|| |.-|+-.+.-+.+-|. |+|+|++.. |++...+..+ -+-|+.-++ +......+..++.. + 
T Consensus        12 aa~G~PiRVGlIGA-G~mG~~ivtQi~~m~G-m~vvaisd~-~~~~ak~A~~~ag~~~~~~~-e~~~~s~~a~Ai~a-G-   85 (438)
T COG4091          12 AAEGKPIRVGLIGA-GEMGTGIVTQIASMPG-MEVVAISDR-NLDAAKRAYDRAGGPKIEAV-EADDASKMADAIEA-G-   85 (438)
T ss_pred             hccCCceEEEEecc-cccchHHHHHHhhcCC-ceEEEEecc-cchHHHHHHHHhcCCccccc-ccchhhHHHHHHhc-C-
Confidence            34467889999997 8889988888887665 999998854 6776666665 345554333 22223344444432 1 


Q ss_pred             CceEEecHHHHHHHhcCCCCCEEEEeccCc--cCcHHHHHHHHcCCceeeecccceeecccchhHHhhhcCCeEe-eccc
Q 017567          150 KPEILAGEQGVIEAARHPDAVTVVTGIVGC--AGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKIL-PADS  226 (369)
Q Consensus       150 ~~~v~~G~~gl~~~~~~~~~D~Vv~AIvG~--aGL~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~~~~Il-PVDS  226 (369)
                      ++ .+.+  ...++...+..|+||.| .|.  .|-+-.+.||.+||.|-+-|=|.=|.=|+++++.|.+.|+-.- ----
T Consensus        86 Ki-~vT~--D~~~i~~~~~IdvIIdA-TG~p~vGA~~~l~Ai~h~KHlVMmNVEaDvtIGp~Lk~~Ad~~GviyS~~~GD  161 (438)
T COG4091          86 KI-AVTD--DAELIIANDLIDVIIDA-TGVPEVGAKIALEAILHGKHLVMMNVEADVTIGPILKQQADAAGVIYSGGAGD  161 (438)
T ss_pred             cE-EEec--chhhhhcCCcceEEEEc-CCCcchhhHhHHHHHhcCCeEEEEEeeeceeecHHHHHHHhhcCeEEeccCCC
Confidence            12 2223  23445667789999988 454  4667789999999999999999999999999999998885332 2234


Q ss_pred             chhhHHHhhc
Q 017567          227 EHSAIFQCIQ  236 (369)
Q Consensus       227 EHsAIfQ~L~  236 (369)
                      |-+++-.+.+
T Consensus       162 eP~~~mEL~e  171 (438)
T COG4091         162 EPSSCMELYE  171 (438)
T ss_pred             CcHHHHHHHH
Confidence            5566555543

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=96.29  E-value=0.011  Score=56.29  Aligned_cols=91  Identities=22%  Similarity=0.289  Sum_probs=62.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      |.||+|+|+||-+|+..++.+.++|+ ++|+++..... +...+. .++                         ++.+  
T Consensus         1 ~mkV~IiG~~G~mG~~i~~~l~~~~~-~elvav~d~~~-~~~~~~-~~~-------------------------~i~~--   50 (257)
T PRK00048          1 MIKVAVAGASGRMGRELIEAVEAAED-LELVAAVDRPG-SPLVGQ-GAL-------------------------GVAI--   50 (257)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCC-CEEEEEEecCC-cccccc-CCC-------------------------Cccc--
Confidence            35899999999999999999988765 99999875433 222111 000                         0101  


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeec
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALAN  199 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLAN  199 (369)
                       .+.+.++.+  ++|+|+....-.....-...|+++||.+.+.+
T Consensus        51 -~~dl~~ll~--~~DvVid~t~p~~~~~~~~~al~~G~~vvigt   91 (257)
T PRK00048         51 -TDDLEAVLA--DADVLIDFTTPEATLENLEFALEHGKPLVIGT   91 (257)
T ss_pred             -cCCHHHhcc--CCCEEEECCCHHHHHHHHHHHHHcCCCEEEEC
Confidence             122344443  58899987776677777889999999988764

>TIGR00036 dapB dihydrodipicolinate reductase

Probab=96.25  E-value=0.031  Score=53.77  Aligned_cols=98  Identities=14%  Similarity=0.168  Sum_probs=61.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      .||+|.|++|-+|+.-++.+.++| +++++++....+-+...+                ...++... .  ..++.+.  
T Consensus         2 ikV~IiGa~G~MG~~i~~~i~~~~-~~elvav~d~~~~~~~~~----------------~~~~~~~~-~--~~gv~~~--   59 (266)
T TIGR00036         2 IKVAVAGAAGRMGRELIKAALAAE-GLQLVAAFERHGSSLQGT----------------DAGELAGI-G--KVGVPVT--   59 (266)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCC-CCEEEEEEecCCccccCC----------------CHHHhcCc-C--cCCceee--
Confidence            489999999999999999999885 599999887554432210                00011000 0  0112222  


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeec
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALAN  199 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLAN  199 (369)
                       ..+.++ . .++|+||..-.=.+...-...|+++|+.+...-
T Consensus        60 -~d~~~l-~-~~~DvVIdfT~p~~~~~~~~~al~~g~~vVigt   99 (266)
T TIGR00036        60 -DDLEAV-E-TDPDVLIDFTTPEGVLNHLKFALEHGVRLVVGT   99 (266)
T ss_pred             -CCHHHh-c-CCCCEEEECCChHHHHHHHHHHHHCCCCEEEEC
Confidence             123344 2 358999887655555666778888888877643

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=96.11  E-value=0.016  Score=57.77  Aligned_cols=34  Identities=18%  Similarity=0.479  Sum_probs=29.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (369)
                      +||+|+|+||.+|..-++.+.+||+ ++++++.+.
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~-~el~~l~~s   34 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPE-VEITYLVSS   34 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCC-ceEEEEecc
Confidence            3799999999999999999999975 899988543

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=96.10  E-value=0.022  Score=49.43  Aligned_cols=37  Identities=27%  Similarity=0.350  Sum_probs=30.6

Q ss_pred             EEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH
Q 017567           79 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD  119 (369)
Q Consensus        79 I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~e  119 (369)
                      |+|+|+||.||+..++-+.+.+  ++|++++  +|-+++.+
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~--~~V~~~~--R~~~~~~~   37 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRG--HEVTALV--RSPSKAED   37 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTT--SEEEEEE--SSGGGHHH
T ss_pred             eEEECCCChHHHHHHHHHHHCC--CEEEEEe--cCchhccc
Confidence            7899999999999999998875  9999998  44445544

...

>PLN02700 homoserine dehydrogenase family protein

Probab=95.96  E-value=0.062  Score=54.99  Aligned_cols=55  Identities=25%  Similarity=0.185  Sum_probs=46.2

Q ss_pred             CCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeecccchhHHhhhcCCeEe
Q 017567          167 PDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKIL  222 (369)
Q Consensus       167 ~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~~~~Il  222 (369)
                      ...+++|.+..+..-..-...|+++|+.|-.|||--+...++.++++++ ++++++
T Consensus       108 ~~~~ViVD~T~s~~~~~~y~~aL~~G~hVVTaNK~~~a~~~~~~~~la~-~~~~~~  162 (377)
T PLN02700        108 STGLVVVDCSASMETIGALNEAVDLGCCIVLANKKPLTSTLEDYDKLAA-HPRRIR  162 (377)
T ss_pred             cCCCEEEECCCChHHHHHHHHHHHCCCeEEcCCchHhccCHHHHHHHHH-cCCeEE
Confidence            3469999999886666677789999999999999999999999988885 676654

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=95.84  E-value=0.014  Score=59.23  Aligned_cols=40  Identities=28%  Similarity=0.518  Sum_probs=34.3

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCH
Q 017567           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNI  114 (369)
Q Consensus        74 ~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv  114 (369)
                      ..++||+|+|+||.+|...++++.+|| .|+|..++..++.
T Consensus        36 ~~~~kVaIvGATG~vG~eLlrlL~~hP-~~el~~l~s~~sa   75 (381)
T PLN02968         36 EEKKRIFVLGASGYTGAEVRRLLANHP-DFEITVMTADRKA   75 (381)
T ss_pred             ccccEEEEECCCChHHHHHHHHHHhCC-CCeEEEEEChhhc
Confidence            356699999999999999999999997 4899999875443

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=95.59  E-value=0.14  Score=46.29  Aligned_cols=64  Identities=20%  Similarity=0.187  Sum_probs=44.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKE  142 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~  142 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+. ++..+.+.++.++...+...+ .|-...+.+..
T Consensus         5 ~k~vlItGas~gIG~~ia~~l~~~--G~~vi~~~-r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   69 (248)
T TIGR01832         5 GKVALVTGANTGLGQGIAVGLAEA--GADIVGAG-RSEPSETQQQVEALGRRFLSLTADLSDIEAIKA   69 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEc-CchHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence            378999999999999999998875  57887765 444566777777766554333 44444444444

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]

Probab=95.48  E-value=0.23  Score=48.45  Aligned_cols=141  Identities=17%  Similarity=0.237  Sum_probs=89.4

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEecH
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGE  157 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G~  157 (369)
                      +|+|.|+ |-||++.++.++..|-+|+.+++ +.++.++..+..+-|.++.+.                           
T Consensus         2 ~vgiVGc-GaIG~~l~e~v~~~~~~~e~v~v-~D~~~ek~~~~~~~~~~~~~s---------------------------   52 (255)
T COG1712           2 KVGIVGC-GAIGKFLLELVRDGRVDFELVAV-YDRDEEKAKELEASVGRRCVS---------------------------   52 (255)
T ss_pred             eEEEEec-cHHHHHHHHHHhcCCcceeEEEE-ecCCHHHHHHHHhhcCCCccc---------------------------
Confidence            6889997 88999999999999989999885 567889888888888765541                           


Q ss_pred             HHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeeccc--chhHHhhhcCCeEeecccchhhHHHhh
Q 017567          158 QGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGP--FVLPLAHKHNIKILPADSEHSAIFQCI  235 (369)
Q Consensus       158 ~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~aG~--li~~~a~k~~~~IlPVDSEHsAIfQ~L  235 (369)
                       .+.++.  .++|++|.|-+==|=..-...++++|+++....=-.|.==|-  -+.++||..+.++.=.-----+| ..|
T Consensus        53 -~ide~~--~~~DlvVEaAS~~Av~e~~~~~L~~g~d~iV~SVGALad~~l~erl~~lak~~~~rv~~pSGAiGGl-D~l  128 (255)
T COG1712          53 -DIDELI--AEVDLVVEAASPEAVREYVPKILKAGIDVIVMSVGALADEGLRERLRELAKCGGARVYLPSGAIGGL-DAL  128 (255)
T ss_pred             -cHHHHh--hccceeeeeCCHHHHHHHhHHHHhcCCCEEEEechhccChHHHHHHHHHHhcCCcEEEecCccchhH-HHH
Confidence             112333  357777777555555555677888888875443211110010  02457777777765221111111 223


Q ss_pred             cCCCCCccceEEEeec
Q 017567          236 QGLPEGALRRIILTAS  251 (369)
Q Consensus       236 ~g~~~~~v~kiiLTAS  251 (369)
                      ..-.-..|+.+.||.-
T Consensus       129 ~aar~g~i~~V~lttr  144 (255)
T COG1712         129 AAARVGGIEEVVLTTR  144 (255)
T ss_pred             HHhhcCCeeEEEEEee
Confidence            3233467999999973

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=95.22  E-value=0.039  Score=55.38  Aligned_cols=38  Identities=32%  Similarity=0.440  Sum_probs=32.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHh--CCCceEEEEEeecCCH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAE--HEDKFRVVALAAGSNI  114 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~--~pd~F~VvaLaag~Nv  114 (369)
                      ..+|+|+||||-+|...++++.+  ||. ++|+.++..++.
T Consensus         4 ~~~vaIvGATG~vG~ellrlL~~~~hP~-~~l~~laS~~sa   43 (336)
T PRK08040          4 GWNIALLGATGAVGEALLELLAERQFPV-GELYALASEESA   43 (336)
T ss_pred             CCEEEEEccCCHHHHHHHHHHhcCCCCc-eEEEEEEccCcC
Confidence            34899999999999999999998  875 899999765443

>PLN02778 3,5-epimerase/4-reductase

Probab=95.18  E-value=0.066  Score=51.46  Aligned_cols=52  Identities=21%  Similarity=0.181  Sum_probs=41.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee-cCCHHHHHHHHHhhCCCEEE
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA-GSNITLLADQVKRFKPQVVA  130 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa-g~Nv~lL~eQ~~~FkP~~V~  130 (369)
                      +||.|+|+||+||....+-+.+.  .++|+.... -.+.+.+....++.+|++|.
T Consensus        10 ~kiLVtG~tGfiG~~l~~~L~~~--g~~V~~~~~~~~~~~~v~~~l~~~~~D~Vi   62 (298)
T PLN02778         10 LKFLIYGKTGWIGGLLGKLCQEQ--GIDFHYGSGRLENRASLEADIDAVKPTHVF   62 (298)
T ss_pred             CeEEEECCCCHHHHHHHHHHHhC--CCEEEEecCccCCHHHHHHHHHhcCCCEEE
Confidence            57999999999999999988876  456765433 35677777778888999877

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.16  E-value=0.22  Score=45.58  Aligned_cols=65  Identities=12%  Similarity=0.091  Sum_probs=45.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEE-EcCchhHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVA-VRNESLLDEIKE  142 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~-v~de~~~~~l~~  142 (369)
                      .|++.|.|+||.||.+..+-+.++  .++|+.+.-+.+.+.+.+...+...+... ..|-...+.++.
T Consensus        15 ~k~vlItGas~gIG~~ia~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~   80 (258)
T PRK06935         15 GKVAIVTGGNTGLGQGYAVALAKA--GADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEK   80 (258)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            378999999999999999999875  67887776556677777777665544332 234444444443

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=95.04  E-value=0.26  Score=44.96  Aligned_cols=83  Identities=14%  Similarity=0.101  Sum_probs=51.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      ++|.|.|+||.||....+-+.++  .++|+.++  +|.+.+.+...+..++...+ .|-...+.+++.+.          
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~----------   66 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQ--GHKVIATG--RRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLA----------   66 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHH----------
Confidence            46999999999999999998875  67777654  45666665555554443322 34444444444321          


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccC
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVG  178 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG  178 (369)
                         .+.+  ...++|.|+++...
T Consensus        67 ---~~~~--~~~~id~vi~~ag~   84 (248)
T PRK10538         67 ---SLPA--EWRNIDVLVNNAGL   84 (248)
T ss_pred             ---HHHH--HcCCCCEEEECCCc
Confidence               1111  12368999987544

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=95.01  E-value=0.07  Score=51.20  Aligned_cols=54  Identities=24%  Similarity=0.401  Sum_probs=42.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec----CCHHHHHHHHHhhCCCEEEEc
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG----SNITLLADQVKRFKPQVVAVR  132 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag----~Nv~lL~eQ~~~FkP~~V~v~  132 (369)
                      +||.|+|+||.||..-.+.+++  ..++|+++.-.    .+.+.+.+..++++|++|.-.
T Consensus         1 MriLI~GasG~lG~~l~~~l~~--~~~~v~~~~r~~~dl~d~~~~~~~~~~~~pd~Vin~   58 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKE--RGYEVIATSRSDLDLTDPEAVAKLLEAFKPDVVINC   58 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTT--TSEEEEEESTTCS-TTSHHHHHHHHHHH--SEEEE-
T ss_pred             CEEEEECCCCHHHHHHHHHHhh--CCCEEEEeCchhcCCCCHHHHHHHHHHhCCCeEecc
Confidence            4799999999999999999887  36899998432    367888899999999988754

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK08219 short chain dehydrogenase; Provisional

Probab=94.96  E-value=0.14  Score=45.39  Aligned_cols=40  Identities=13%  Similarity=0.123  Sum_probs=30.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ  120 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ  120 (369)
                      +|++.|+|+||+||....+.+.+.   ++|+++.  +|.+.+.+.
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~---~~V~~~~--r~~~~~~~~   42 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT---HTLLLGG--RPAERLDEL   42 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh---CCEEEEe--CCHHHHHHH
Confidence            478999999999999999988875   7787775  455554433

>PRK07326 short chain dehydrogenase; Provisional

Probab=94.89  E-value=0.3  Score=43.73  Aligned_cols=81  Identities=12%  Similarity=0.188  Sum_probs=50.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC--CCE-EEEcCchhHHHHHHHHhcCCCCceE
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK--PQV-VAVRNESLLDEIKEALANVEEKPEI  153 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~Fk--P~~-V~v~de~~~~~l~~~l~~~~~~~~v  153 (369)
                      ++|.|+|+||.||....+-+.++  .++|+++.  +|-+.+.+..++++  .+. +...|-...+.+++.+.        
T Consensus         7 ~~ilItGatg~iG~~la~~l~~~--g~~V~~~~--r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~--------   74 (237)
T PRK07326          7 KVALITGGSKGIGFAIAEALLAE--GYKVAITA--RDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVD--------   74 (237)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHC--CCEEEEee--CCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHH--------
Confidence            68999999999999999998875  67887764  55566555554443  222 22234444444444332        


Q ss_pred             EecHHHHHHHhcCCCCCEEEEec
Q 017567          154 LAGEQGVIEAARHPDAVTVVTGI  176 (369)
Q Consensus       154 ~~G~~gl~~~~~~~~~D~Vv~AI  176 (369)
                           .+.+.  ...+|+|++..
T Consensus        75 -----~~~~~--~~~~d~vi~~a   90 (237)
T PRK07326         75 -----AIVAA--FGGLDVLIANA   90 (237)
T ss_pred             -----HHHHH--cCCCCEEEECC
Confidence                 11111  23588999874

>PRK07806 short chain dehydrogenase; Provisional

Probab=94.86  E-value=0.37  Score=43.55  Aligned_cols=65  Identities=17%  Similarity=0.130  Sum_probs=39.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC--CHHHHHHHHHhhCCCEE-EEcCchhHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS--NITLLADQVKRFKPQVV-AVRNESLLDEIKE  142 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~--Nv~lL~eQ~~~FkP~~V-~v~de~~~~~l~~  142 (369)
                      .|++.|.|+||.||....+-+.+.  .++|++++-+.  +.+.+.+..+....+.. ...|-...+.++.
T Consensus         6 ~k~vlItGasggiG~~l~~~l~~~--G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~   73 (248)
T PRK07806          6 GKTALVTGSSRGIGADTAKILAGA--GAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAA   73 (248)
T ss_pred             CcEEEEECCCCcHHHHHHHHHHHC--CCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            368999999999999999988765  57887764322  23334444444433332 2345444444444

>PRK12829 short chain dehydrogenase; Provisional

Probab=94.81  E-value=0.34  Score=44.02  Aligned_cols=82  Identities=17%  Similarity=0.154  Sum_probs=49.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCC--EEEEcCchhHHHHHHHHhcCCCCceEE
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQ--VVAVRNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~--~V~v~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      |++.|.|+||.||....+-+.++  .++|+.+.  +|-+.+.+...++.-.  .+...|-...+.+++.+.         
T Consensus        12 ~~vlItGa~g~iG~~~a~~L~~~--g~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---------   78 (264)
T PRK12829         12 LRVLVTGGASGIGRAIAEAFAEA--GARVHVCD--VSEAALAATAARLPGAKVTATVADVADPAQVERVFD---------   78 (264)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHH---------
Confidence            68999999999999999999876  56776655  3445554444443211  233344444444444332         


Q ss_pred             ecHHHHHHHhcCCCCCEEEEecc
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIV  177 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIv  177 (369)
                          .+.+..  .++|.|+....
T Consensus        79 ----~~~~~~--~~~d~vi~~ag   95 (264)
T PRK12829         79 ----TAVERF--GGLDVLVNNAG   95 (264)
T ss_pred             ----HHHHHh--CCCCEEEECCC
Confidence                111211  36899998744

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=94.80  E-value=0.061  Score=54.39  Aligned_cols=36  Identities=22%  Similarity=0.576  Sum_probs=29.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceE---EEEEeecCC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFR---VVALAAGSN  113 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~---VvaLaag~N  113 (369)
                      .+|+|+|+||.+|...++++.+||+ |+   +..++..++
T Consensus         6 ~~VaIvGATG~vG~ell~lL~~h~~-f~v~~l~~~aS~~s   44 (347)
T PRK06728          6 YHVAVVGATGAVGQKIIELLEKETK-FNIAEVTLLSSKRS   44 (347)
T ss_pred             CEEEEEeCCCHHHHHHHHHHHHCCC-CCcccEEEEECccc
Confidence            4899999999999999999998876 88   656654433

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=94.76  E-value=0.045  Score=54.59  Aligned_cols=56  Identities=13%  Similarity=0.194  Sum_probs=40.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh-CCCEEEEcC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF-KPQVVAVRN  133 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F-kP~~V~v~d  133 (369)
                      +.||+|+|+||.+|...++++.+|| .|++++++.....+. ..--..| ..+.|+++-
T Consensus         2 ~~~VaIvGAtGy~G~eLlrlL~~hp-~~~l~~~~s~~~~~~-~~~~~~~~~~DvvFlal   58 (313)
T PRK11863          2 KPKVFIDGEAGTTGLQIRERLAGRS-DIELLSIPEAKRKDA-AARRELLNAADVAILCL   58 (313)
T ss_pred             CcEEEEECCCCHHHHHHHHHHhcCC-CeEEEEEecCCCCcc-cCchhhhcCCCEEEECC
Confidence            3589999999999999999999999 599999987654322 1111122 357777643

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=94.73  E-value=0.3  Score=49.10  Aligned_cols=32  Identities=31%  Similarity=0.483  Sum_probs=27.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      .++|.|+|+||.||+...+-+.+.  .++|++++
T Consensus        60 ~~kVLVtGatG~IG~~l~~~Ll~~--G~~V~~l~   91 (390)
T PLN02657         60 DVTVLVVGATGYIGKFVVRELVRR--GYNVVAVA   91 (390)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEE
Confidence            458999999999999999988765  68899886

>TIGR03855 NAD_NadX aspartate dehydrogenase

Probab=94.69  E-value=0.38  Score=45.87  Aligned_cols=90  Identities=18%  Similarity=0.130  Sum_probs=68.7

Q ss_pred             HHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeec-----ccchhHHhhhcCCeEeecccchhhHHHh
Q 017567          160 VIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAG-----GPFVLPLAHKHNIKILPADSEHSAIFQC  234 (369)
Q Consensus       160 l~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~a-----G~li~~~a~k~~~~IlPVDSEHsAIfQ~  234 (369)
                      +.+++. +++|.|+.+-.=.+=-.-+.+++++||.+..   |+..+-     ..-+.+.++++|.++..- |-+-+.++.
T Consensus        30 ~~eLl~-~~vDaVviatp~~~H~e~a~~aL~aGkhVl~---~s~gAlad~e~~~~l~~aA~~~g~~l~i~-sGai~g~d~  104 (229)
T TIGR03855        30 FDEFLP-EDVDIVVEAASQEAVKEYAEKILKNGKDLLI---MSVGALADRELRERLREVARSSGRKVYIP-SGAIGGLDA  104 (229)
T ss_pred             HHHHhc-CCCCEEEECCChHHHHHHHHHHHHCCCCEEE---ECCcccCCHHHHHHHHHHHHhcCCEEEEC-hHHHHHHHH
Confidence            345554 4699999997777777778999999999988   665432     344677899999887644 777788899


Q ss_pred             hcCCCCCccceEEEeecCCC
Q 017567          235 IQGLPEGALRRIILTASGGA  254 (369)
Q Consensus       235 L~g~~~~~v~kiiLTASGGP  254 (369)
                      |+......++.+.+|..=.|
T Consensus       105 l~a~~ig~~~~V~i~~~k~p  124 (229)
T TIGR03855       105 LKAASLGRIERVVLTTTKPP  124 (229)
T ss_pred             HHhcccCCceEEEEEEecCh
Confidence            98777788999999976444

Members of this protein family are L-aspartate dehydrogenase, as shown for the NADP-dependent enzyme TM_1643 of Thermotoga maritima. Members lack homology to NadB, the aspartate oxidase (EC 1.4.3.16) of most mesophilic bacteria (described by TIGR00551), which this enzyme replaces in the generation of oxaloacetate from aspartate for the NAD biosynthetic pathway. All members of the seed alignment are found adjacent to other genes of NAD biosynthesis, although other uses of L-aspartate dehydrogenase may occur.

>PRK08267 short chain dehydrogenase; Provisional

Probab=94.64  E-value=0.39  Score=43.96  Aligned_cols=46  Identities=28%  Similarity=0.269  Sum_probs=35.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK  125 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~Fk  125 (369)
                      ||++.|.|+||.||....+-+.+.  .++|+.+.  +|.+.+.+...+..
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~   46 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAE--GWRVGAYD--INEAGLAALAAELG   46 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHC--CCeEEEEe--CCHHHHHHHHHHhc
Confidence            478999999999999999988875  57787764  56777766655543

>PRK06101 short chain dehydrogenase; Provisional

Probab=94.61  E-value=0.28  Score=44.68  Aligned_cols=65  Identities=22%  Similarity=0.203  Sum_probs=42.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEAL  144 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l  144 (369)
                      ++++.|.|+||.||.+..+-+.+.  .++|+.+  .+|.+++.++..+...-.+...|-.+.+.+++.+
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   65 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQ--GWQVIAC--GRNQSVLDELHTQSANIFTLAFDVTDHPGTKAAL   65 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhC--CCEEEEE--ECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHH
Confidence            468999999999999988888765  5777664  3577777666554322222334545555555543

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=94.51  E-value=0.16  Score=54.65  Aligned_cols=113  Identities=16%  Similarity=0.203  Sum_probs=62.9

Q ss_pred             CCeeEEEEecCChHhHHHHHHHH-hCCCceEEEEEeecCCHHHHHHHHHhhC--CCEE-EEcCchhHHHHHHHHhcCCCC
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVA-EHEDKFRVVALAAGSNITLLADQVKRFK--PQVV-AVRNESLLDEIKEALANVEEK  150 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~-~~pd~F~VvaLaag~Nv~lL~eQ~~~Fk--P~~V-~v~de~~~~~l~~~l~~~~~~  150 (369)
                      .-|+|.|.|+|||||..-..-+. .+|.+..+..-.= .|...+....++.-  .++. .+.|-.+++.+...+.+  ++
T Consensus       249 ~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E-~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~--~k  325 (588)
T COG1086         249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDE-YKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEG--HK  325 (588)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCch-HHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhc--CC
Confidence            34899999999999999876555 4566655544221 13333333333331  2333 35666777777777654  34


Q ss_pred             ceEEecHHHHHH--HhcCCCCCEEEEeccCccCcHHHHHHHHcC
Q 017567          151 PEILAGEQGVIE--AARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (369)
Q Consensus       151 ~~v~~G~~gl~~--~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~g  192 (369)
                      +++.+-..+++.  +++.....-|-|=|-|..-  -.-+|+++|
T Consensus       326 vd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~n--v~~aa~~~~  367 (588)
T COG1086         326 VDIVFHAAALKHVPLVEYNPEEAIKTNVLGTEN--VAEAAIKNG  367 (588)
T ss_pred             CceEEEhhhhccCcchhcCHHHHHHHhhHhHHH--HHHHHHHhC
Confidence            666666666554  3444333344444444322  224455555

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=94.51  E-value=0.11  Score=48.05  Aligned_cols=52  Identities=21%  Similarity=0.382  Sum_probs=41.2

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeec----CCHHHHHHHHHhhCCCEEEE
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG----SNITLLADQVKRFKPQVVAV  131 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag----~Nv~lL~eQ~~~FkP~~V~v  131 (369)
                      ||.|+|+||+||+...+-+.+.  .++|++++-.    .|.+.+.+.++..+|++|+-
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~--g~~v~~~~r~~~d~~~~~~~~~~~~~~~~d~vi~   56 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPE--GRVVVALTSSQLDLTDPEALERLLRAIRPDAVVN   56 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhc--CCEEEEeCCcccCCCCHHHHHHHHHhCCCCEEEE
Confidence            5899999999999999988875  6888887542    35567777777778888764

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK12828 short chain dehydrogenase; Provisional

Probab=94.50  E-value=0.33  Score=43.02  Aligned_cols=41  Identities=22%  Similarity=0.336  Sum_probs=30.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ  120 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ  120 (369)
                      .|++.|.|+||+||....+-+.+.  .++|++++  +|.+.+.+.
T Consensus         7 ~k~vlItGatg~iG~~la~~l~~~--G~~v~~~~--r~~~~~~~~   47 (239)
T PRK12828          7 GKVVAITGGFGGLGRATAAWLAAR--GARVALIG--RGAAPLSQT   47 (239)
T ss_pred             CCEEEEECCCCcHhHHHHHHHHHC--CCeEEEEe--CChHhHHHH
Confidence            468999999999999999988775  67877665  344444333

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.43  E-value=0.26  Score=44.46  Aligned_cols=82  Identities=22%  Similarity=0.236  Sum_probs=50.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH---HHHhhCCCEEEE-cCchhHHHHHHHHhcCCCCce
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD---QVKRFKPQVVAV-RNESLLDEIKEALANVEEKPE  152 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~e---Q~~~FkP~~V~v-~de~~~~~l~~~l~~~~~~~~  152 (369)
                      |++.|.|+||.||....+-+.++  .++|+.+.. +|-+++.+   +++....+...+ .|-.+.+.++..+..      
T Consensus         5 ~~vlItGa~g~iG~~~a~~l~~~--g~~v~~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------   75 (250)
T PRK08063          5 KVALVTGSSRGIGKAIALRLAEE--GYDIAVNYA-RSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQ------   75 (250)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcC-CCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH------
Confidence            68999999999999999999886  567765433 44444444   444444343333 454555555544321      


Q ss_pred             EEecHHHHHHHhcCCCCCEEEEec
Q 017567          153 ILAGEQGVIEAARHPDAVTVVTGI  176 (369)
Q Consensus       153 v~~G~~gl~~~~~~~~~D~Vv~AI  176 (369)
                             +.+  ....+|+|++..
T Consensus        76 -------~~~--~~~~id~vi~~a   90 (250)
T PRK08063         76 -------IDE--EFGRLDVFVNNA   90 (250)
T ss_pred             -------HHH--HcCCCCEEEECC
Confidence                   111  123589999873

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=94.42  E-value=0.29  Score=48.39  Aligned_cols=95  Identities=20%  Similarity=0.339  Sum_probs=63.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCch-hHHHHHHHHhcCCCCceEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNES-LLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~-~~~~l~~~l~~~~~~~~v~  154 (369)
                      -.+|.|.|+||.+|+-++++.+..  .+.+++.+..+  ++.. .++++..+++.-..+. ..+.+++            
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~--G~~~v~~~~s~--~k~~-~~~~lGAd~vi~y~~~~~~~~v~~------------  205 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKAL--GATVVAVVSSS--EKLE-LLKELGADHVINYREEDFVEQVRE------------  205 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHc--CCcEEEEecCH--HHHH-HHHhcCCCEEEcCCcccHHHHHHH------------
Confidence            468999999999999999999987  34677766554  5555 7899999888764443 2333333            


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCcee
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~ia  196 (369)
                              +.....+|+|++. +|-.-+...+.+++.+-++.
T Consensus       206 --------~t~g~gvDvv~D~-vG~~~~~~~l~~l~~~G~lv  238 (326)
T COG0604         206 --------LTGGKGVDVVLDT-VGGDTFAASLAALAPGGRLV  238 (326)
T ss_pred             --------HcCCCCceEEEEC-CCHHHHHHHHHHhccCCEEE
Confidence                    2222347777776 44455555666666665544

>PRK09186 flagellin modification protein A; Provisional

Probab=94.41  E-value=0.38  Score=43.57  Aligned_cols=64  Identities=17%  Similarity=0.197  Sum_probs=41.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC-----CCEEE-EcCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK-----PQVVA-VRNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~Fk-----P~~V~-v~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||....+.+.+.  .++|+.+.  ++.+.+.+...+.+     ..... ..|-.+.+.+.+.
T Consensus         4 ~k~vlItGas~giG~~~a~~l~~~--g~~v~~~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~   73 (256)
T PRK09186          4 GKTILITGAGGLIGSALVKAILEA--GGIVIAAD--IDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEF   73 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEe--cChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHH
Confidence            368999999999999999999875  67887763  45555544444432     12222 4455555555544

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=94.37  E-value=0.39  Score=43.57  Aligned_cols=66  Identities=15%  Similarity=0.178  Sum_probs=42.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC-CHHHHHHHHHhhCCCEE-EEcCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS-NITLLADQVKRFKPQVV-AVRNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~-Nv~lL~eQ~~~FkP~~V-~v~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||......+.++  .++|+.+.-.. ..+.+.+++++...+.. ...|-...+.+++.
T Consensus         7 ~~~vlItGasg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   74 (262)
T PRK13394          7 GKTAVVTGAASGIGKEIALELARA--GAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAG   74 (262)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHH
Confidence            368999999999999999999886  56777553221 23445555555554433 23555555555544

>PRK07024 short chain dehydrogenase; Provisional

Probab=94.34  E-value=0.61  Score=42.79  Aligned_cols=45  Identities=16%  Similarity=0.197  Sum_probs=35.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      +|++.|.|+||.||++..+.+.+.  .++|+.+  .+|.+.+.+...+.
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~--G~~v~~~--~r~~~~~~~~~~~~   46 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQ--GATLGLV--ARRTDALQAFAARL   46 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHhc
Confidence            368999999999999999999876  5677654  35677777666655

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=94.32  E-value=0.71  Score=41.05  Aligned_cols=66  Identities=20%  Similarity=0.165  Sum_probs=40.4

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHH---HHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLA---DQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~---eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      ..|++.|.|+||.||....+-+.+.  .++|+.++.+ ..+.+.   +..+....++..+ .|-...+.+++.
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~--G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   73 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQ--GANVVINYAS-SEAGAEALVAEIGALGGKALAVQGDVSDAESVERA   73 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCC-chhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            3468999999999999999998875  6788766543 333333   3333333444333 344444444443

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=94.24  E-value=0.42  Score=43.62  Aligned_cols=63  Identities=21%  Similarity=0.191  Sum_probs=39.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCCEEE-EcCchhHHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQVVA-VRNESLLDEIKEA  143 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F---kP~~V~-v~de~~~~~l~~~  143 (369)
                      |++.|.|+||+||....+-+.+.  .++|+.+  .+|-+.+.++..+.   .++... ..|-...+.+++.
T Consensus        11 k~vlItGa~g~iG~~ia~~l~~~--G~~V~~~--~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~   77 (255)
T PRK07523         11 RRALVTGSSQGIGYALAEGLAQA--GAEVILN--GRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAA   77 (255)
T ss_pred             CEEEEECCcchHHHHHHHHHHHc--CCEEEEE--eCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHH
Confidence            68999999999999999988875  6888765  34555554444333   233322 2344444444443

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.21  E-value=0.47  Score=42.62  Aligned_cols=82  Identities=20%  Similarity=0.167  Sum_probs=49.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC--CCE-EEEcCchhHHHHHHHHhcCCCCce
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK--PQV-VAVRNESLLDEIKEALANVEEKPE  152 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~Fk--P~~-V~v~de~~~~~l~~~l~~~~~~~~  152 (369)
                      .|++.|.|+||.||.+..+.+.+.  .++|++++  +|.+.+.++..+..  .+. +...|-.+.+.++..+.       
T Consensus         5 ~~~vlItGasg~iG~~l~~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   73 (251)
T PRK07231          5 GKVAIVTGASSGIGEGIARRFAAE--GARVVVTD--RNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVA-------   73 (251)
T ss_pred             CcEEEEECCCChHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH-------
Confidence            368999999999999999998876  56766653  44555555544433  222 22344444444544332       


Q ss_pred             EEecHHHHHHHhcCCCCCEEEEec
Q 017567          153 ILAGEQGVIEAARHPDAVTVVTGI  176 (369)
Q Consensus       153 v~~G~~gl~~~~~~~~~D~Vv~AI  176 (369)
                            .+.+  ....+|.|++..
T Consensus        74 ------~~~~--~~~~~d~vi~~a   89 (251)
T PRK07231         74 ------AALE--RFGSVDILVNNA   89 (251)
T ss_pred             ------HHHH--HhCCCCEEEECC
Confidence                  1111  234689988874

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.20  E-value=0.6  Score=41.42  Aligned_cols=65  Identities=18%  Similarity=0.134  Sum_probs=40.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHH---HHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNIT---LLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~---lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      +|+|.|.|+||.||.+..+-+.+.  .++|+.++. ++-+   .+.+..++..++...+ .|-...+.+++.
T Consensus         6 ~~~vlItGasg~iG~~l~~~l~~~--g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   74 (249)
T PRK12825          6 GRVALVTGAARGLGRAIALRLARA--GADVVVHYR-SDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAA   74 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeC-CCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHH
Confidence            478999999999999999988875  456655443 3433   3444444444443222 444444444443

>PRK06196 oxidoreductase; Provisional

Probab=94.17  E-value=0.47  Score=45.41  Aligned_cols=63  Identities=14%  Similarity=0.177  Sum_probs=41.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKE  142 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~  142 (369)
                      .|+|.|.|+||.||..+..-+.+.  .++|+.+  .+|.+.+.+...+.+--.+...|-.+.+.+++
T Consensus        26 ~k~vlITGasggIG~~~a~~L~~~--G~~Vv~~--~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~   88 (315)
T PRK06196         26 GKTAIVTGGYSGLGLETTRALAQA--GAHVIVP--ARRPDVAREALAGIDGVEVVMLDLADLESVRA   88 (315)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHhhhCeEEEccCCCHHHHHH
Confidence            378999999999999999988875  5777764  35667666655554311222344444444443

>PLN02583 cinnamoyl-CoA reductase

Probab=94.15  E-value=0.3  Score=46.47  Aligned_cols=33  Identities=18%  Similarity=0.324  Sum_probs=28.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      .|+|.|.|+||.||....+-+.+.  .|+|+++.-
T Consensus         6 ~k~vlVTGatG~IG~~lv~~Ll~~--G~~V~~~~R   38 (297)
T PLN02583          6 SKSVCVMDASGYVGFWLVKRLLSR--GYTVHAAVQ   38 (297)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEEc
Confidence            468999999999999999988875  689988764

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=94.09  E-value=0.067  Score=47.48  Aligned_cols=38  Identities=26%  Similarity=0.396  Sum_probs=31.9

Q ss_pred             EEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHH
Q 017567           79 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLA  118 (369)
Q Consensus        79 I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~  118 (369)
                      |.|+|+||+||....+-+.+.  .++|++++..++-+.+.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~--g~~v~~~~~~~~~~~~~   38 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKK--GHEVIVLSRSSNSESFE   38 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHT--TTEEEEEESCSTGGHHH
T ss_pred             EEEEccCCHHHHHHHHHHHHc--CCccccccccccccccc
Confidence            789999999999999999876  56788988887766543

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=94.09  E-value=0.46  Score=43.34  Aligned_cols=50  Identities=20%  Similarity=0.189  Sum_probs=34.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQ  127 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~  127 (369)
                      .|++.|.|+||.||....+-+.+.  .++|+.+.-....+.+.++++....+
T Consensus         8 ~k~vlVtGas~gIG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~   57 (260)
T PRK12823          8 GKVVVVTGAAQGIGRGVALRAAAE--GARVVLVDRSELVHEVAAELRAAGGE   57 (260)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCchHHHHHHHHHHhcCCe
Confidence            368999999999999999988875  57777654332234444444444333

>PRK06057 short chain dehydrogenase; Provisional

Probab=94.05  E-value=0.53  Score=43.08  Aligned_cols=62  Identities=15%  Similarity=0.056  Sum_probs=40.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKE  142 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~  142 (369)
                      .|+|.|.|+||.||.+..+-+.++  .++|+.+.  +|-+.+.+...++...++ ..|-...+.++.
T Consensus         7 ~~~vlItGasggIG~~~a~~l~~~--G~~v~~~~--r~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~   68 (255)
T PRK06057          7 GRVAVITGGGSGIGLATARRLAAE--GATVVVGD--IDPEAGKAAADEVGGLFV-PTDVTDEDAVNA   68 (255)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHc--CCEEEEEe--CCHHHHHHHHHHcCCcEE-EeeCCCHHHHHH
Confidence            368999999999999999999876  57776654  455555554455543333 334444444443

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=94.03  E-value=0.55  Score=43.26  Aligned_cols=65  Identities=12%  Similarity=0.081  Sum_probs=44.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+-.-+.+.  .++|+.+ .+++.+.+.++.++...+...+ .|-.+.+.+++.
T Consensus         8 ~k~~lItGas~gIG~aia~~l~~~--G~~vv~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   73 (251)
T PRK12481          8 GKVAIITGCNTGLGQGMAIGLAKA--GADIVGV-GVAEAPETQAQVEALGRKFHFITADLIQQKDIDSI   73 (251)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEe-cCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHH
Confidence            368999999999999999988875  7788765 3455666777777665554332 444444444443

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=94.02  E-value=0.084  Score=52.80  Aligned_cols=54  Identities=13%  Similarity=0.215  Sum_probs=40.3

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHH-HHHHhhCCCEEEEcC
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLA-DQVKRFKPQVVAVRN  133 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~-eQ~~~FkP~~V~v~d  133 (369)
                      ||+|+|+||..|...++.+.+||+ |+++.+++.++.+... +++. -+.+.|+++-
T Consensus         3 ~v~IvGasGy~G~el~rlL~~HP~-~el~~l~s~~~~~~~~~~~~~-~~~D~vFlal   57 (310)
T TIGR01851         3 KVFIDGEAGTTGLQIRERLSGRDD-IELLSIAPDRRKDAAERAKLL-NAADVAILCL   57 (310)
T ss_pred             eEEEECCCChhHHHHHHHHhCCCC-eEEEEEecccccCcCCHhHhh-cCCCEEEECC
Confidence            799999999999999999999987 9999999887643211 1110 1357777643

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=93.97  E-value=0.34  Score=43.56  Aligned_cols=44  Identities=27%  Similarity=0.456  Sum_probs=33.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      +++.|+|+||.||..+...+.++  .++|+.+  ++|.+++.+.+.++
T Consensus        29 ~~vlVlGgtG~iG~~~a~~l~~~--g~~V~l~--~R~~~~~~~l~~~l   72 (194)
T cd01078          29 KTAVVLGGTGPVGQRAAVLLARE--GARVVLV--GRDLERAQKAADSL   72 (194)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHC--CCEEEEE--cCCHHHHHHHHHHH
Confidence            68999999999999998888875  3566654  46777776665544

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=93.96  E-value=0.54  Score=42.51  Aligned_cols=64  Identities=16%  Similarity=0.176  Sum_probs=40.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHH---HHHHhhCCCEEEE-cCchhHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLA---DQVKRFKPQVVAV-RNESLLDEIKE  142 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~---eQ~~~FkP~~V~v-~de~~~~~l~~  142 (369)
                      +|+|.|.|+||.||......+.+.  .++|+. ...+|.+.+.   ++++++.++...+ .|-...+.+++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~--g~~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   69 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAAR--GWSVGI-NYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIA   69 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHC--CCEEEE-EeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHH
Confidence            468999999999999999998875  577754 4455665544   4444444443333 33333333443

>PRK05717 oxidoreductase; Validated

Probab=93.91  E-value=0.66  Score=42.45  Aligned_cols=46  Identities=15%  Similarity=0.117  Sum_probs=33.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKP  126 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP  126 (369)
                      |++.|.|+||+||..+..-+.+.  .++|+.+.  ++.+.+.+..+++..
T Consensus        11 k~vlItG~sg~IG~~~a~~l~~~--g~~v~~~~--~~~~~~~~~~~~~~~   56 (255)
T PRK05717         11 RVALVTGAARGIGLGIAAWLIAE--GWQVVLAD--LDRERGSKVAKALGE   56 (255)
T ss_pred             CEEEEeCCcchHHHHHHHHHHHc--CCEEEEEc--CCHHHHHHHHHHcCC
Confidence            68999999999999999988875  56776653  455555555555543

>PRK08226 short chain dehydrogenase; Provisional

Probab=93.86  E-value=0.6  Score=42.71  Aligned_cols=66  Identities=20%  Similarity=0.211  Sum_probs=40.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCE-EEEcCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQV-VAVRNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~-V~v~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||....+-+.+.  .++|+.++-..+.+.+.+..+....+. ....|-...+.++..
T Consensus         6 ~~~~lItG~s~giG~~la~~l~~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~   72 (263)
T PRK08226          6 GKTALITGALQGIGEGIARVFARH--GANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAA   72 (263)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHH
Confidence            368999999999999999999876  677776654333333333333323332 233454444445443

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=93.83  E-value=0.19  Score=46.52  Aligned_cols=32  Identities=25%  Similarity=0.394  Sum_probs=27.3

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      +|.|.|+||+||...++-+.+....++|+++.
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~   32 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLD   32 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEec
Confidence            58999999999999999887765568898875

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK07825 short chain dehydrogenase; Provisional

Probab=93.81  E-value=0.72  Score=42.64  Aligned_cols=80  Identities=15%  Similarity=0.047  Sum_probs=50.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC-CCEEEEcCchhHHHHHHHHhcCCCCceEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK-PQVVAVRNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~Fk-P~~V~v~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      .|++.|.|+||.||....+.+.+.  .++|+.+  .+|.+.+.+..++.. ..++ ..|-...+.+.+.+.         
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~--G~~v~~~--~r~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~---------   70 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAAL--GARVAIG--DLDEALAKETAAELGLVVGG-PLDVTDPASFAAFLD---------   70 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHhccceEE-EccCCCHHHHHHHHH---------
Confidence            368999999999999999988875  5666554  367788777666654 3332 344444444444331         


Q ss_pred             ecHHHHHHHhcCCCCCEEEEe
Q 017567          155 AGEQGVIEAARHPDAVTVVTG  175 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~A  175 (369)
                          .+.+.  ..+.|++|+.
T Consensus        71 ----~~~~~--~~~id~li~~   85 (273)
T PRK07825         71 ----AVEAD--LGPIDVLVNN   85 (273)
T ss_pred             ----HHHHH--cCCCCEEEEC
Confidence                11221  2468888886

>PRK12743 oxidoreductase; Provisional

Probab=93.80  E-value=0.55  Score=43.08  Aligned_cols=64  Identities=19%  Similarity=0.106  Sum_probs=41.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCH---HHHHHHHHhhCCCEEEE-cCchhHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNI---TLLADQVKRFKPQVVAV-RNESLLDEIKE  142 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv---~lL~eQ~~~FkP~~V~v-~de~~~~~l~~  142 (369)
                      +|++.|.|+||.||......+.++  .++|+.+.. ++.   +.+.++++++..+...+ .|-...+.++.
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~--G~~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   69 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQ--GFDIGITWH-SDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQ   69 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeC-CChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence            368999999999999999999886  678866543 343   44555555555443332 34444444443

>PRK08628 short chain dehydrogenase; Provisional

Probab=93.80  E-value=0.61  Score=42.53  Aligned_cols=64  Identities=17%  Similarity=0.186  Sum_probs=39.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKE  142 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~  142 (369)
                      |++.|.|+||.||......+.+.  .++|+.++-...-..+.+++++...+...+ .|-...+.++.
T Consensus         8 ~~ilItGasggiG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   72 (258)
T PRK08628          8 KVVIVTGGASGIGAAISLRLAEE--GAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRD   72 (258)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHc--CCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence            58999999999999999998876  456666543322224445555555544333 44444444444

>PRK08265 short chain dehydrogenase; Provisional

Probab=93.79  E-value=0.67  Score=42.86  Aligned_cols=64  Identities=16%  Similarity=0.054  Sum_probs=43.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEE-EcCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVA-VRNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~-v~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+  .+|.+.+.+..+++..+... ..|-.+.+.+++.
T Consensus         6 ~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   70 (261)
T PRK08265          6 GKVAIVTGGATLIGAAVARALVAA--GARVAIV--DIDADNGAAVAASLGERARFIATDITDDAAIERA   70 (261)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHH
Confidence            368999999999999999998875  5677665  35666676666666543322 2444444444443

>PRK06482 short chain dehydrogenase; Provisional

Probab=93.76  E-value=0.77  Score=42.49  Aligned_cols=62  Identities=15%  Similarity=0.150  Sum_probs=38.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEE-EcCchhHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVA-VRNESLLDEIKE  142 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~-v~de~~~~~l~~  142 (369)
                      |++.|.|+||.||....+-+.+.  .++|+++.  +|.+.+.++..++..+... -.|-.+.+.+++
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~--g~~v~~~~--r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   65 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLAR--GDRVAATV--RRPDALDDLKARYGDRLWVLQLDVTDSAAVRA   65 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHhccCceEEEEccCCCHHHHHH
Confidence            67999999999999999888765  46676654  4556555544444333222 234344444444

>PRK07774 short chain dehydrogenase; Provisional

Probab=93.71  E-value=0.65  Score=41.91  Aligned_cols=64  Identities=22%  Similarity=0.182  Sum_probs=39.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC-CHHHHHHHHHhhCCCEE-EEcCchhHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS-NITLLADQVKRFKPQVV-AVRNESLLDEIKE  142 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~-Nv~lL~eQ~~~FkP~~V-~v~de~~~~~l~~  142 (369)
                      |++.|.|+||.||.+...-+.+.  .++|+.+.-.. +.+.+.+.+++..++.. ...|-.+.+.++.
T Consensus         7 k~vlItGasg~iG~~la~~l~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   72 (250)
T PRK07774          7 KVAIVTGAAGGIGQAYAEALARE--GASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKA   72 (250)
T ss_pred             CEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Confidence            67999999999999999998875  57888765321 22334444443333332 2344444444444

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=93.64  E-value=0.12  Score=52.31  Aligned_cols=89  Identities=24%  Similarity=0.295  Sum_probs=51.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHh-CCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAE-HEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~-~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      +++|+|+|+||.+|+..++.+.+ |+.-=++..++-.++..   ++..+|+=+.+.+-                      
T Consensus         1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG---~~~~~f~~~~~~v~----------------------   55 (334)
T COG0136           1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASARSAG---KKYIEFGGKSIGVP----------------------   55 (334)
T ss_pred             CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecccccC---CccccccCccccCc----------------------
Confidence            36899999999999999999998 76633344444333322   11233332221110                      


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcC
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~g  192 (369)
                         +...++....++|+|+.+.-|-..-+---++.++|
T Consensus        56 ---~~~~~~~~~~~~Divf~~ag~~~s~~~~p~~~~~G   90 (334)
T COG0136          56 ---EDAADEFVFSDVDIVFFAAGGSVSKEVEPKAAEAG   90 (334)
T ss_pred             ---cccccccccccCCEEEEeCchHHHHHHHHHHHHcC
Confidence               00111222236889998887766655555566666

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=93.63  E-value=0.091  Score=52.30  Aligned_cols=32  Identities=34%  Similarity=0.623  Sum_probs=29.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVAL  108 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaL  108 (369)
                      +.||+|+|+||.||...++.+.+||+ ++|+++
T Consensus         3 ~~~V~I~GatG~iG~~l~~~L~~~p~-~el~~~   34 (349)
T PRK08664          3 KLKVGILGATGMVGQRFVQLLANHPW-FEVTAL   34 (349)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHcCCC-ceEEEE
Confidence            46899999999999999999999876 699998

>PRK05693 short chain dehydrogenase; Provisional

Probab=93.62  E-value=0.8  Score=42.44  Aligned_cols=40  Identities=18%  Similarity=0.197  Sum_probs=31.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD  119 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~e  119 (369)
                      +|++.|.|+||.||....+.+.+.  .++|++++  +|.+.+.+
T Consensus         1 mk~vlItGasggiG~~la~~l~~~--G~~V~~~~--r~~~~~~~   40 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAA--GYEVWATA--RKAEDVEA   40 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHC--CCEEEEEe--CCHHHHHH
Confidence            478999999999999999998875  68888764  34454443

>PRK06182 short chain dehydrogenase; Validated

Probab=93.60  E-value=0.79  Score=42.45  Aligned_cols=84  Identities=19%  Similarity=0.228  Sum_probs=50.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .|++.|.|+||.||....+.+.+.  .++|++++  +|.+.+.+... .+..++ ..|-.+.+.+.+.+.          
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~--G~~V~~~~--r~~~~l~~~~~-~~~~~~-~~Dv~~~~~~~~~~~----------   66 (273)
T PRK06182          3 KKVALVTGASSGIGKATARRLAAQ--GYTVYGAA--RRVDKMEDLAS-LGVHPL-SLDVTDEASIKAAVD----------   66 (273)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHh-CCCeEE-EeeCCCHHHHHHHHH----------
Confidence            468999999999999999988764  67887764  56676655432 233332 234344444443321          


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccC
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAG  181 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aG  181 (369)
                         .+.+  ....+|+||+. +|...
T Consensus        67 ---~~~~--~~~~id~li~~-ag~~~   86 (273)
T PRK06182         67 ---TIIA--EEGRIDVLVNN-AGYGS   86 (273)
T ss_pred             ---HHHH--hcCCCCEEEEC-CCcCC
Confidence               1111  12468999987 45443

>PRK12939 short chain dehydrogenase; Provisional

Probab=93.60  E-value=0.76  Score=41.26  Aligned_cols=45  Identities=16%  Similarity=0.094  Sum_probs=34.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      .|++.|.|+||.||....+.+.+.  .++|+.+  .++-+.+.+...++
T Consensus         7 ~~~vlItGa~g~iG~~la~~l~~~--G~~v~~~--~r~~~~~~~~~~~~   51 (250)
T PRK12939          7 GKRALVTGAARGLGAAFAEALAEA--GATVAFN--DGLAAEARELAAAL   51 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHc--CCEEEEE--eCCHHHHHHHHHHH
Confidence            368999999999999999998875  5778776  35566655554443

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=93.54  E-value=0.2  Score=47.91  Aligned_cols=51  Identities=27%  Similarity=0.444  Sum_probs=37.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec--------CCHHHHHHHHHhhCCCEEE
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG--------SNITLLADQVKRFKPQVVA  130 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag--------~Nv~lL~eQ~~~FkP~~V~  130 (369)
                      +||.|+|+||+||....+-+.+..   +|+++.-.        .+.+.+.+..++.+|+.|.
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g---~V~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vi   59 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG---NLIALDVHSTDYCGDFSNPEGVAETVRKIRPDVIV   59 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC---CEEEeccccccccCCCCCHHHHHHHHHhcCCCEEE
Confidence            379999999999999988776543   47776532        3445676777777898776

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=93.54  E-value=0.18  Score=49.61  Aligned_cols=49  Identities=14%  Similarity=0.250  Sum_probs=39.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK  125 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~Fk  125 (369)
                      +||+|+|+||.+|..+...+...+-.++|+.+.-..+.++|..+..++.
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~   49 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIY   49 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhh
Confidence            4799999999999999999998777778888877666677766665543

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>CHL00194 ycf39 Ycf39; Provisional

Probab=93.52  E-value=0.38  Score=46.19  Aligned_cols=30  Identities=27%  Similarity=0.556  Sum_probs=26.9

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      +|.|+|+||+||...++-+.+.  .++|++++
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~--g~~V~~l~   31 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDE--GYQVRCLV   31 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHC--CCeEEEEE
Confidence            7999999999999999988875  68999987

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=93.51  E-value=0.94  Score=40.22  Aligned_cols=81  Identities=17%  Similarity=0.119  Sum_probs=47.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHH---HhhCCCEEEE-cCchhHHHHHHHHhcCCCCce
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQV---KRFKPQVVAV-RNESLLDEIKEALANVEEKPE  152 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~---~~FkP~~V~v-~de~~~~~l~~~l~~~~~~~~  152 (369)
                      |+|.|.|+||.||....+.+.++  .++|+.++  +|-+.+.+..   ++...+...+ .|-...+.+...+.       
T Consensus         6 ~~ilItGasg~iG~~l~~~l~~~--g~~v~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (246)
T PRK05653          6 KTALVTGASRGIGRAIALRLAAD--GAKVVIYD--SNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIE-------   74 (246)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe--CChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH-------
Confidence            68999999999999999998876  56665554  3444444333   3333343333 34333344444332       


Q ss_pred             EEecHHHHHHHhcCCCCCEEEEec
Q 017567          153 ILAGEQGVIEAARHPDAVTVVTGI  176 (369)
Q Consensus       153 v~~G~~gl~~~~~~~~~D~Vv~AI  176 (369)
                            ++.+.  ...+|.|+...
T Consensus        75 ------~~~~~--~~~id~vi~~a   90 (246)
T PRK05653         75 ------AAVEA--FGALDILVNNA   90 (246)
T ss_pred             ------HHHHH--hCCCCEEEECC
Confidence                  11221  24588888874

>PRK08278 short chain dehydrogenase; Provisional

Probab=93.50  E-value=0.84  Score=42.69  Aligned_cols=64  Identities=17%  Similarity=0.195  Sum_probs=40.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC--------HHHHHHHHHhhCCCEEEE-cCchhHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN--------ITLLADQVKRFKPQVVAV-RNESLLDEIKE  142 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~N--------v~lL~eQ~~~FkP~~V~v-~de~~~~~l~~  142 (369)
                      |++.|.|+||.||.+..+-+.++  .++|+.+.-...        .+.+.+++++...+...+ .|-...+.+++
T Consensus         7 k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~   79 (273)
T PRK08278          7 KTLFITGASRGIGLAIALRAARD--GANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAA   79 (273)
T ss_pred             CEEEEECCCchHHHHHHHHHHHC--CCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHH
Confidence            68999999999999999998876  467776642211        334445555544444333 44444444444

>PRK08263 short chain dehydrogenase; Provisional

Probab=93.48  E-value=1  Score=41.82  Aligned_cols=46  Identities=26%  Similarity=0.304  Sum_probs=34.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK  125 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~Fk  125 (369)
                      .|+|.|.|+||.||....+-+.+.  .++|+.+.  +|-+.+.+...++.
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~--g~~V~~~~--r~~~~~~~~~~~~~   48 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALER--GDRVVATA--RDTATLADLAEKYG   48 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHhcc
Confidence            368999999999999999988765  57777654  56666666555553

>PRK06138 short chain dehydrogenase; Provisional

Probab=93.42  E-value=0.94  Score=40.82  Aligned_cols=64  Identities=14%  Similarity=0.143  Sum_probs=40.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh--CCCE-EEEcCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF--KPQV-VAVRNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F--kP~~-V~v~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||.+..+-+.+.  ..+|+.+.  +|.+.+.+...+.  +.+. +...|-.+.+.+++.
T Consensus         5 ~k~~lItG~sg~iG~~la~~l~~~--G~~v~~~~--r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   71 (252)
T PRK06138          5 GRVAIVTGAGSGIGRATAKLFARE--GARVVVAD--RDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEAL   71 (252)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHC--CCeEEEec--CCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence            468999999999999999988875  57776654  4555554444433  2222 222444444445443

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=93.39  E-value=0.87  Score=41.84  Aligned_cols=63  Identities=17%  Similarity=0.210  Sum_probs=41.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEE-EEcCchhHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVV-AVRNESLLDEIKE  142 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V-~v~de~~~~~l~~  142 (369)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+  .+|-+.+.+...++..+.. ...|-.+.+.+++
T Consensus         6 ~k~vlVtGas~gIG~~ia~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   69 (263)
T PRK06200          6 GQVALITGGGSGIGRALVERFLAE--GARVAVL--ERSAEKLASLRQRFGDHVLVVEGDVTSYADNQR   69 (263)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHhCCcceEEEccCCCHHHHHH
Confidence            468999999999999999998876  5677664  3566666665555543322 2234333334443

>PRK08643 acetoin reductase; Validated

Probab=93.39  E-value=0.81  Score=41.67  Aligned_cols=42  Identities=21%  Similarity=0.211  Sum_probs=31.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK  122 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~  122 (369)
                      |++.|.|+||.||.+..+.+.++  .++|+.+.  ++.+.+.+...
T Consensus         3 k~~lItGas~giG~~la~~l~~~--G~~v~~~~--r~~~~~~~~~~   44 (256)
T PRK08643          3 KVALVTGAGQGIGFAIAKRLVED--GFKVAIVD--YNEETAQAAAD   44 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHH
Confidence            57999999999999999999876  67877765  33444443333

>PRK07454 short chain dehydrogenase; Provisional

Probab=93.39  E-value=1.1  Score=40.40  Aligned_cols=44  Identities=16%  Similarity=0.167  Sum_probs=32.8

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK  122 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~  122 (369)
                      .+|++.|.|+||.||....+-+.+.  .++|+.+.  +|.+.+.+...
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~--G~~V~~~~--r~~~~~~~~~~   48 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKA--GWDLALVA--RSQDALEALAA   48 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHH
Confidence            4678999999999999999998875  56777754  45555444433

>PRK07035 short chain dehydrogenase; Provisional

Probab=93.36  E-value=0.81  Score=41.56  Aligned_cols=42  Identities=17%  Similarity=0.210  Sum_probs=31.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK  122 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~  122 (369)
                      |++.|.|+||.||.....-+.+.  .++|+.+.  +|.+.+.++.+
T Consensus         9 k~vlItGas~gIG~~l~~~l~~~--G~~Vi~~~--r~~~~~~~~~~   50 (252)
T PRK07035          9 KIALVTGASRGIGEAIAKLLAQQ--GAHVIVSS--RKLDGCQAVAD   50 (252)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHH
Confidence            68999999999999999999876  56888775  34444444433

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=93.34  E-value=0.98  Score=41.27  Aligned_cols=47  Identities=17%  Similarity=0.118  Sum_probs=35.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQ  127 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~  127 (369)
                      |++.|.|+||.||......+.++  .++|+.+  .+|.+.+.+...+...+
T Consensus         7 ~~vlItGas~~iG~~ia~~l~~~--G~~v~~~--~r~~~~~~~~~~~~~~~   53 (257)
T PRK07067          7 KVALLTGAASGIGEAVAERYLAE--GARVVIA--DIKPARARLAALEIGPA   53 (257)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHc--CCEEEEE--cCCHHHHHHHHHHhCCc
Confidence            68999999999999999999886  5777765  35667666666655443

>PRK08589 short chain dehydrogenase; Validated

Probab=93.31  E-value=0.72  Score=42.99  Aligned_cols=42  Identities=19%  Similarity=0.259  Sum_probs=31.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK  122 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~  122 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.-  | +.+.+.+.
T Consensus         6 ~k~vlItGas~gIG~aia~~l~~~--G~~vi~~~r--~-~~~~~~~~   47 (272)
T PRK08589          6 NKVAVITGASTGIGQASAIALAQE--GAYVLAVDI--A-EAVSETVD   47 (272)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeC--c-HHHHHHHH
Confidence            468999999999999999988876  577877643  3 44444333

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=93.28  E-value=0.94  Score=41.59  Aligned_cols=64  Identities=19%  Similarity=0.161  Sum_probs=41.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      |.+.|.|+||.||.++.+-+.+.  .++|+++. .+..+.+.+++++...+...+ .|-.+.+.+++.
T Consensus        11 k~~lItG~~~gIG~a~a~~l~~~--G~~vv~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   75 (253)
T PRK08993         11 KVAVVTGCDTGLGQGMALGLAEA--GCDIVGIN-IVEPTETIEQVTALGRRFLSLTADLRKIDGIPAL   75 (253)
T ss_pred             CEEEEECCCchHHHHHHHHHHHC--CCEEEEec-CcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence            68999999999999999988875  67888763 333355555665544443332 343444444443

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=93.23  E-value=0.96  Score=44.23  Aligned_cols=62  Identities=16%  Similarity=0.146  Sum_probs=45.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCC--CEEEEcCchhHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKP--QVVAVRNESLLDEIK  141 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP--~~V~v~de~~~~~l~  141 (369)
                      .|-+.|-|+|..||..|-+.+.+.  .++|+..  +++.++|.+++.++..  -++...|-.+.+.++
T Consensus         6 ~kv~lITGASSGiG~A~A~~l~~~--G~~vvl~--aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~   69 (246)
T COG4221           6 GKVALITGASSGIGEATARALAEA--GAKVVLA--ARREERLEALADEIGAGAALALALDVTDRAAVE   69 (246)
T ss_pred             CcEEEEecCcchHHHHHHHHHHHC--CCeEEEE--eccHHHHHHHHHhhccCceEEEeeccCCHHHHH
Confidence            367999999999999999999886  7777764  4678999999999984  233334444444433

>PRK06181 short chain dehydrogenase; Provisional

Probab=93.19  E-value=0.96  Score=41.36  Aligned_cols=39  Identities=28%  Similarity=0.266  Sum_probs=29.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD  119 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~e  119 (369)
                      +++.|.|+||.||....+-+.+.  .++|+++.  +|.+.+.+
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~--g~~Vi~~~--r~~~~~~~   40 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARA--GAQLVLAA--RNETRLAS   40 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHH
Confidence            57999999999999999888765  46788775  34444433

>PRK06180 short chain dehydrogenase; Provisional

Probab=93.19  E-value=1.1  Score=41.81  Aligned_cols=63  Identities=17%  Similarity=0.127  Sum_probs=41.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKE  142 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~  142 (369)
                      .|++.|.|+||.||.....-+.+.  .++|+++.  +|.+.+.+.......+...+ .|-.+.+.+..
T Consensus         4 ~~~vlVtGasggiG~~la~~l~~~--G~~V~~~~--r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~   67 (277)
T PRK06180          4 MKTWLITGVSSGFGRALAQAALAA--GHRVVGTV--RSEAARADFEALHPDRALARLLDVTDFDAIDA   67 (277)
T ss_pred             CCEEEEecCCChHHHHHHHHHHhC--cCEEEEEe--CCHHHHHHHHhhcCCCeeEEEccCCCHHHHHH
Confidence            468999999999999999988775  57777754  56677766655554433332 34333334443

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=93.18  E-value=0.14  Score=51.44  Aligned_cols=40  Identities=18%  Similarity=0.378  Sum_probs=33.9

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHh--CCCceEEEEEeecCCHH
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAE--HEDKFRVVALAAGSNIT  115 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~--~pd~F~VvaLaag~Nv~  115 (369)
                      .+.||+|+|+||.+|...++++.+  ||. ++++.++..++..
T Consensus         6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~-~~l~~las~rsaG   47 (344)
T PLN02383          6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPY-SSLKMLASARSAG   47 (344)
T ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCCc-ceEEEEEccCCCC
Confidence            345899999999999999999998  776 8899888776643

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=93.16  E-value=0.13  Score=50.13  Aligned_cols=38  Identities=26%  Similarity=0.270  Sum_probs=30.8

Q ss_pred             CCCCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           71 KTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        71 ~~~~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      |-.-.+|+|.|.|+||+||....+-+.+.  .++|+++.-
T Consensus        10 ~~~~~~~~vlVtGatGfiG~~lv~~L~~~--g~~V~~~d~   47 (348)
T PRK15181         10 KLVLAPKRWLITGVAGFIGSGLLEELLFL--NQTVIGLDN   47 (348)
T ss_pred             cccccCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeC
Confidence            33334578999999999999999999876  578999864

>PRK07814 short chain dehydrogenase; Provisional

Probab=93.14  E-value=0.73  Score=42.53  Aligned_cols=32  Identities=22%  Similarity=0.166  Sum_probs=27.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      .|++.|.|+||.||.++.+-+.+.  .++|+.+.
T Consensus        10 ~~~vlItGasggIG~~~a~~l~~~--G~~Vi~~~   41 (263)
T PRK07814         10 DQVAVVTGAGRGLGAAIALAFAEA--GADVLIAA   41 (263)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEe
Confidence            368999999999999999998875  57887765

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=93.13  E-value=0.94  Score=41.71  Aligned_cols=45  Identities=18%  Similarity=0.222  Sum_probs=33.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      .|++.|.|+||.||.+..+-+.+.  .++|+.+  .+|.+.+.+....+
T Consensus         5 ~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~--~r~~~~~~~l~~~~   49 (262)
T TIGR03325         5 GEVVLVTGGASGLGRAIVDRFVAE--GARVAVL--DKSAAGLQELEAAH   49 (262)
T ss_pred             CcEEEEECCCChHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHhhc
Confidence            478999999999999999988876  6777765  34556655544333

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=93.12  E-value=0.53  Score=43.44  Aligned_cols=40  Identities=23%  Similarity=0.324  Sum_probs=31.4

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHH
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLA  118 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~  118 (369)
                      .+|+|.|+|+||.||...+.-+.+.  .++|++++  +|.+.+.
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~--g~~V~~~~--R~~~~~~   55 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAK--GFAVKAGV--RDVDKAK   55 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhC--CCEEEEEe--cCHHHHH
Confidence            3578999999999999999988775  68888875  4444443

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=93.09  E-value=0.34  Score=41.36  Aligned_cols=36  Identities=17%  Similarity=0.421  Sum_probs=32.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN  113 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~N  113 (369)
                      .||+|.|+||=.|+...+.+.++|+ |++++....++
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~-~~lv~~v~~~~   36 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPG-FELVGAVDRKP   36 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTT-EEEEEEEETTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCC-cEEEEEEecCC
Confidence            3799999999999999999999755 99999988776

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=93.09  E-value=0.73  Score=49.79  Aligned_cols=44  Identities=25%  Similarity=0.286  Sum_probs=33.6

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK  122 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~  122 (369)
                      ..|.|.|+|+||.||....+-+.+.  .++|++++  +|.+.+.+...
T Consensus        79 ~gKvVLVTGATGgIG~aLAr~LLk~--G~~Vval~--Rn~ekl~~l~~  122 (576)
T PLN03209         79 DEDLAFVAGATGKVGSRTVRELLKL--GFRVRAGV--RSAQRAESLVQ  122 (576)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC--CCeEEEEe--CCHHHHHHHHH
Confidence            4478999999999999999888765  68888764  56666554433

>PRK06949 short chain dehydrogenase; Provisional

Probab=93.06  E-value=1.5  Score=39.79  Aligned_cols=41  Identities=20%  Similarity=0.299  Sum_probs=31.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ  120 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ  120 (369)
                      .|+|.|.|+||.||....+-+.+.  .++|+++.  +|.+.+.+.
T Consensus         9 ~k~ilItGasg~IG~~~a~~l~~~--G~~Vi~~~--r~~~~~~~~   49 (258)
T PRK06949          9 GKVALVTGASSGLGARFAQVLAQA--GAKVVLAS--RRVERLKEL   49 (258)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHH
Confidence            478999999999999999999875  56777664  344554433

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=93.04  E-value=1.1  Score=40.27  Aligned_cols=45  Identities=20%  Similarity=0.199  Sum_probs=32.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~  123 (369)
                      +|.+.|.|+||.||.+..+.+.+.  .++|+.+. .+|.+.+.+...+
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~--g~~v~~~~-~~~~~~~~~~~~~   45 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQE--GYTVAVNY-QQNLHAAQEVVNL   45 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEe-CCChHHHHHHHHH
Confidence            468999999999999999998875  57776543 3455555444433

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=93.04  E-value=1.1  Score=40.58  Aligned_cols=85  Identities=18%  Similarity=0.175  Sum_probs=49.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHH---HHhhCCCEEEE-cCchhHHHHHHHHhcCCCCc
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ---VKRFKPQVVAV-RNESLLDEIKEALANVEEKP  151 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ---~~~FkP~~V~v-~de~~~~~l~~~l~~~~~~~  151 (369)
                      .|++.|.|+||.||....+-+.++  .++|+.+ ..++-+.+.++   +++...+...+ .|-...+.+.+.+..     
T Consensus         6 ~~~~lItG~s~~iG~~la~~l~~~--g~~v~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~-----   77 (247)
T PRK12935          6 GKVAIVTGGAKGIGKAITVALAQE--GAKVVIN-YNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEE-----   77 (247)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHc--CCEEEEE-cCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH-----
Confidence            478999999999999999988876  5677654 34444444443   33333333333 344444444443321     


Q ss_pred             eEEecHHHHHHHhcCCCCCEEEEeccCc
Q 017567          152 EILAGEQGVIEAARHPDAVTVVTGIVGC  179 (369)
Q Consensus       152 ~v~~G~~gl~~~~~~~~~D~Vv~AIvG~  179 (369)
                              +.+  ...++|.|+.. +|.
T Consensus        78 --------~~~--~~~~id~vi~~-ag~   94 (247)
T PRK12935         78 --------AVN--HFGKVDILVNN-AGI   94 (247)
T ss_pred             --------HHH--HcCCCCEEEEC-CCC
Confidence                    111  12468888877 444

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=92.93  E-value=1.4  Score=39.49  Aligned_cols=47  Identities=17%  Similarity=0.251  Sum_probs=34.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKP  126 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP  126 (369)
                      .|++.|.|+||.||.+..+-+.++  .+.|+. . .++.+.+.++..+...
T Consensus         6 ~~~vlItGa~g~iG~~la~~l~~~--g~~v~~-~-~~~~~~~~~~~~~~~~   52 (245)
T PRK12936          6 GRKALVTGASGGIGEEIARLLHAQ--GAIVGL-H-GTRVEKLEALAAELGE   52 (245)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEE-E-cCCHHHHHHHHHHhCC
Confidence            368999999999999999888765  455543 3 3567777776665543

>PRK06172 short chain dehydrogenase; Provisional

Probab=92.92  E-value=0.88  Score=41.34  Aligned_cols=65  Identities=18%  Similarity=0.113  Sum_probs=39.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec-CCHHHHHHHHHhhCCCEEEE-cCchhHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-SNITLLADQVKRFKPQVVAV-RNESLLDEIKE  142 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag-~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~  142 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.-. .+.+.+.++.+++..+...+ .|-...+.+.+
T Consensus         7 ~k~ilItGas~~iG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~   73 (253)
T PRK06172          7 GKVALVTGGAAGIGRATALAFARE--GAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKA   73 (253)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            378999999999999999988875  5677665421 12334444555554443322 34333334443

>PRK12742 oxidoreductase; Provisional

Probab=92.90  E-value=0.61  Score=41.75  Aligned_cols=50  Identities=14%  Similarity=0.098  Sum_probs=36.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQV  128 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~  128 (369)
                      .|+|.|.|+||.||..+.+.+.+.  .++|+.+ ..++.+.+.+...++....
T Consensus         6 ~k~vlItGasggIG~~~a~~l~~~--G~~v~~~-~~~~~~~~~~l~~~~~~~~   55 (237)
T PRK12742          6 GKKVLVLGGSRGIGAAIVRRFVTD--GANVRFT-YAGSKDAAERLAQETGATA   55 (237)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEe-cCCCHHHHHHHHHHhCCeE
Confidence            368999999999999999988875  5677654 3445666666666655443

>PRK12744 short chain dehydrogenase; Provisional

Probab=92.90  E-value=1.3  Score=40.61  Aligned_cols=64  Identities=16%  Similarity=0.164  Sum_probs=39.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec--CCHH---HHHHHHHhhCCCEEE-EcCchhHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG--SNIT---LLADQVKRFKPQVVA-VRNESLLDEIKE  142 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag--~Nv~---lL~eQ~~~FkP~~V~-v~de~~~~~l~~  142 (369)
                      |++.|.|+||.||..+.+.+.+.  .++|+.+...  ++.+   .+.++.+.+..+... ..|-...+.+++
T Consensus         9 k~vlItGa~~gIG~~~a~~l~~~--G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~   78 (257)
T PRK12744          9 KVVLIAGGAKNLGGLIARDLAAQ--GAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEK   78 (257)
T ss_pred             cEEEEECCCchHHHHHHHHHHHC--CCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHH
Confidence            68999999999999999999875  5677666542  2333   333444444444332 234444444444

>PRK06194 hypothetical protein; Provisional

Probab=92.90  E-value=1.1  Score=41.66  Aligned_cols=64  Identities=17%  Similarity=0.184  Sum_probs=40.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F---kP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||....+-+.+.  .++|+.+.  ++.+.+.+...+.   ..+...+ .|-.+.+.+.+.
T Consensus         6 ~k~vlVtGasggIG~~la~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~   73 (287)
T PRK06194          6 GKVAVITGAASGFGLAFARIGAAL--GMKLVLAD--VQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEAL   73 (287)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHC--CCEEEEEe--CChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence            468999999999999999988876  56776553  3555555544443   3343322 444444444443

>PRK12827 short chain dehydrogenase; Provisional

Probab=92.89  E-value=1  Score=40.23  Aligned_cols=47  Identities=13%  Similarity=0.153  Sum_probs=33.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee--cCCHHHHHHHHHhh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA--GSNITLLADQVKRF  124 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa--g~Nv~lL~eQ~~~F  124 (369)
                      .|++.|.|+||.||....+-+.++  .++|+.+.-  .++.+.+.+...++
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~   54 (249)
T PRK12827          6 SRRVLITGGSGGLGRAIAVRLAAD--GADVIVLDIHPMRGRAEADAVAAGI   54 (249)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCeEEEEcCcccccHHHHHHHHHHH
Confidence            368999999999999999888876  567777642  34555555444443

>PRK09135 pteridine reductase; Provisional

Probab=92.85  E-value=0.93  Score=40.56  Aligned_cols=40  Identities=15%  Similarity=0.144  Sum_probs=30.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD  119 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~e  119 (369)
                      ++|.|.|+||.||.+..+-+.++  .++|+++. +++.+.+.+
T Consensus         7 ~~vlItGa~g~iG~~l~~~l~~~--g~~v~~~~-r~~~~~~~~   46 (249)
T PRK09135          7 KVALITGGARRIGAAIARTLHAA--GYRVAIHY-HRSAAEADA   46 (249)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEc-CCCHHHHHH
Confidence            68999999999999999998876  68888775 333344433

>PRK07890 short chain dehydrogenase; Provisional

Probab=92.81  E-value=0.97  Score=40.99  Aligned_cols=42  Identities=21%  Similarity=0.124  Sum_probs=30.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQV  121 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~  121 (369)
                      .|++.|.|+||.||.++.+-+.+.  .++|+.+.  +|.+.+.+..
T Consensus         5 ~k~vlItGa~~~IG~~la~~l~~~--G~~V~~~~--r~~~~~~~~~   46 (258)
T PRK07890          5 GKVVVVSGVGPGLGRTLAVRAARA--GADVVLAA--RTAERLDEVA   46 (258)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHc--CCEEEEEe--CCHHHHHHHH
Confidence            478999999999999999988876  56776654  3444443333

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=92.80  E-value=0.18  Score=49.98  Aligned_cols=35  Identities=14%  Similarity=0.152  Sum_probs=30.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS  112 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~  112 (369)
                      +|+|.|+|+||+||..+...+.+.  .++|++++-..
T Consensus        21 ~~~IlVtGgtGfIG~~l~~~L~~~--G~~V~~v~r~~   55 (370)
T PLN02695         21 KLRICITGAGGFIASHIARRLKAE--GHYIIASDWKK   55 (370)
T ss_pred             CCEEEEECCccHHHHHHHHHHHhC--CCEEEEEEecc
Confidence            368999999999999999999885  68999987443

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=92.78  E-value=0.16  Score=50.28  Aligned_cols=36  Identities=28%  Similarity=0.487  Sum_probs=31.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHh--CCCceEEEEEeecCC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAE--HEDKFRVVALAAGSN  113 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~--~pd~F~VvaLaag~N  113 (369)
                      +||+|+|+||.+|...++.+.+  ||. |+|++++..++
T Consensus         2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~-~~l~~l~s~~~   39 (334)
T PRK14874          2 YNVAVVGATGAVGREMLNILEERNFPV-DKLRLLASARS   39 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCc-ceEEEEEcccc
Confidence            5899999999999999999998  665 89999976544

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=92.77  E-value=1.1  Score=40.07  Aligned_cols=44  Identities=16%  Similarity=0.055  Sum_probs=31.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~  123 (369)
                      .|+|.|+|+||.||.....-+.++  .++|++++  +|.+.+.+...+
T Consensus         6 ~~~ilItGasg~iG~~l~~~l~~~--g~~V~~~~--r~~~~~~~~~~~   49 (251)
T PRK12826          6 GRVALVTGAARGIGRAIAVRLAAD--GAEVIVVD--ICGDDAAATAEL   49 (251)
T ss_pred             CCEEEEcCCCCcHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHH
Confidence            468999999999999998887765  57887764  444444444433

>PRK05867 short chain dehydrogenase; Provisional

Probab=92.73  E-value=0.87  Score=41.59  Aligned_cols=43  Identities=19%  Similarity=0.205  Sum_probs=32.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~  123 (369)
                      |++.|.|+||.||..+..-+.+.  .++|+.+.  +|.+.+.+...+
T Consensus        10 k~vlVtGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~   52 (253)
T PRK05867         10 KRALITGASTGIGKRVALAYVEA--GAQVAIAA--RHLDALEKLADE   52 (253)
T ss_pred             CEEEEECCCchHHHHHHHHHHHC--CCEEEEEc--CCHHHHHHHHHH
Confidence            68999999999999999999876  56776643  455555544443

>PRK05866 short chain dehydrogenase; Provisional

Probab=92.73  E-value=1.9  Score=41.10  Aligned_cols=43  Identities=30%  Similarity=0.366  Sum_probs=32.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~  123 (369)
                      |++.|.|+||-||....+.+.++  .++|+.++  +|.+.+.+...+
T Consensus        41 k~vlItGasggIG~~la~~La~~--G~~Vi~~~--R~~~~l~~~~~~   83 (293)
T PRK05866         41 KRILLTGASSGIGEAAAEQFARR--GATVVAVA--RREDLLDAVADR   83 (293)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHH
Confidence            68999999999999999999886  57776653  455665554443

>smart00846 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain

Probab=92.72  E-value=1.2  Score=39.66  Aligned_cols=107  Identities=26%  Similarity=0.343  Sum_probs=64.8

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH------hhCCCEEEEcCchhHHHHHHHHhcCCCCc
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK------RFKPQVVAVRNESLLDEIKEALANVEEKP  151 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~------~FkP~~V~v~de~~~~~l~~~l~~~~~~~  151 (369)
                      ||+|.|. |-||+..++.+.+. ..++|+++..-...+.++.+.+      .|++. +...+..        +.-.+..+
T Consensus         2 kv~I~G~-GriGr~v~~~~~~~-~~~~lvai~d~~~~~~~a~ll~~Ds~hg~~~~~-v~~~~~~--------l~i~g~~i   70 (149)
T smart00846        2 KVGINGF-GRIGRLVLRALLER-PDIEVVAINDLTDPETLAHLLKYDSVHGRFPGE-VEVDEDG--------LIVNGKKI   70 (149)
T ss_pred             EEEEECc-CHHHHHHHHHHHhC-CCCEEEEeecCCCHHHHHHHhcccCCCCCCCCc-EEEeCCE--------EEECCEEE
Confidence            7999998 99999999998876 4699999876567888877766      22222 2211111        11011223


Q ss_pred             eEEecHHHHHHHh-cCCCCCEEEEeccCccCcHHHH-HHHHcC-Cceee
Q 017567          152 EILAGEQGVIEAA-RHPDAVTVVTGIVGCAGLKPTV-AAIEAG-KDIAL  197 (369)
Q Consensus       152 ~v~~G~~gl~~~~-~~~~~D~Vv~AIvG~aGL~pt~-~Ai~~g-K~iaL  197 (369)
                      .++. +....++- ....+|+||.+ +|..+-.... .-+++| |+|.+
T Consensus        71 ~~~~-~~~p~~~~w~~~gvDiVie~-tG~f~~~~~~~~hl~~GakkVii  117 (149)
T smart00846       71 KVLA-ERDPANLPWKELGVDIVVEC-TGKFTTREKASAHLKAGAKKVII  117 (149)
T ss_pred             EEEe-cCChHHCcccccCCeEEEec-cccccchHHHHHHHHcCCCEEEe
Confidence            3332 22222221 23468999999 8877666654 456667 55543

GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. N-terminal domain is a Rossmann NAD(P) binding fold.

>PRK06500 short chain dehydrogenase; Provisional

Probab=92.66  E-value=0.94  Score=40.74  Aligned_cols=47  Identities=21%  Similarity=0.223  Sum_probs=35.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQ  127 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~  127 (369)
                      |++.|.|+||.||....+-+.+.  .++|+.+  .+|.+.+.+..+++..+
T Consensus         7 k~vlItGasg~iG~~la~~l~~~--g~~v~~~--~r~~~~~~~~~~~~~~~   53 (249)
T PRK06500          7 KTALITGGTSGIGLETARQFLAE--GARVAIT--GRDPASLEAARAELGES   53 (249)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHC--CCEEEEe--cCCHHHHHHHHHHhCCc
Confidence            68999999999999999998876  4677655  45667777666666443

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=92.64  E-value=0.57  Score=49.04  Aligned_cols=57  Identities=18%  Similarity=0.236  Sum_probs=40.5

Q ss_pred             ccccCCCCCCeeEEEEecCChHhHHHHHHHHhC-------CCceEEEEEeecCCHHHHHHHHHhhC
Q 017567           67 ETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEH-------EDKFRVVALAAGSNITLLADQVKRFK  125 (369)
Q Consensus        67 ~~~~~~~~~~kkI~ILGSTGSIGtqTLdVI~~~-------pd~F~VvaLaag~Nv~lL~eQ~~~Fk  125 (369)
                      |+..++|..|-||+|.|++|.||...+--+...       +---+++-+  ..|-+++..++.++.
T Consensus        91 ~~~~~~~~~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvli--D~~~~~a~G~amDL~  154 (444)
T PLN00112         91 EEETKSWKKLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGS--ERSKQALEGVAMELE  154 (444)
T ss_pred             chhhhcCCCCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEE--cCCcchhHHHHHHHH
Confidence            334689999999999999999999998877653       111244433  457777777766553

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=92.62  E-value=1.8  Score=39.37  Aligned_cols=94  Identities=11%  Similarity=0.087  Sum_probs=59.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      .+|.|.|++|.+|..++.+.+..  .++|++.+  ++-+++ +.++++..+.+...++..   +.               
T Consensus       138 ~~vlI~g~~g~~g~~~~~~a~~~--g~~v~~~~--~~~~~~-~~~~~~g~~~~~~~~~~~---~~---------------  194 (320)
T cd05286         138 DTVLVHAAAGGVGLLLTQWAKAL--GATVIGTV--SSEEKA-ELARAAGADHVINYRDED---FV---------------  194 (320)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHc--CCEEEEEc--CCHHHH-HHHHHCCCCEEEeCCchh---HH---------------
Confidence            58999999999999999999887  57777765  344444 334667766554332211   11               


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCce
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~i  195 (369)
                       +.+.++.....+|.|++...| ..+...+.+++.+-++
T Consensus       195 -~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~g~~  231 (320)
T cd05286         195 -ERVREITGGRGVDVVYDGVGK-DTFEGSLDSLRPRGTL  231 (320)
T ss_pred             -HHHHHHcCCCCeeEEEECCCc-HhHHHHHHhhccCcEE
Confidence             112233333458999988766 5666667777655443

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=92.61  E-value=1.1  Score=43.21  Aligned_cols=94  Identities=12%  Similarity=0.040  Sum_probs=61.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      ++|.|.|+ |+||..++.+.+..  .. +|++...  +-+++ ++++++..+.+.-.++...   .+.            
T Consensus       171 ~~VlV~G~-G~vG~~aiqlak~~--G~~~Vi~~~~--~~~~~-~~a~~lGa~~vi~~~~~~~---~~~------------  229 (343)
T PRK09880        171 KRVFVSGV-GPIGCLIVAAVKTL--GAAEIVCADV--SPRSL-SLAREMGADKLVNPQNDDL---DHY------------  229 (343)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHc--CCcEEEEEeC--CHHHH-HHHHHcCCcEEecCCcccH---HHH------------
Confidence            58999996 99999999999876  45 4555443  33444 5778888877653322211   111            


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeee
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALA  198 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLA  198 (369)
                           .+  ....+|+|++++-+-..+...+.+++.|-++.+.
T Consensus       230 -----~~--~~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~  265 (343)
T PRK09880        230 -----KA--EKGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQV  265 (343)
T ss_pred             -----hc--cCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEE
Confidence                 00  1124899999965446788888888888776554

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=92.55  E-value=0.28  Score=48.53  Aligned_cols=51  Identities=22%  Similarity=0.423  Sum_probs=43.4

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC----CHHHHHHHHHhhCCCEEEE
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS----NITLLADQVKRFKPQVVAV  131 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~----Nv~lL~eQ~~~FkP~~V~v  131 (369)
                      +|.|+|+||-.|+.-.+.+.   ..|+|++++..+    |.+.+.+.+++.+|+.|.-
T Consensus         2 ~iLi~G~~GqLG~~L~~~l~---~~~~v~a~~~~~~Ditd~~~v~~~i~~~~PDvVIn   56 (281)
T COG1091           2 KILITGANGQLGTELRRALP---GEFEVIATDRAELDITDPDAVLEVIRETRPDVVIN   56 (281)
T ss_pred             cEEEEcCCChHHHHHHHHhC---CCceEEeccCccccccChHHHHHHHHhhCCCEEEE
Confidence            39999999999998777765   579999998765    6788999999999998863

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=92.53  E-value=0.17  Score=48.84  Aligned_cols=33  Identities=24%  Similarity=0.398  Sum_probs=27.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      +|+|.|+|+||+||.....-+.+.. .++|+++.
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~-~~~V~~~~   33 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETT-DWEVYGMD   33 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCC-CCeEEEEe
Confidence            4689999999999999999887642 48999986

>PRK07060 short chain dehydrogenase; Provisional

Probab=92.53  E-value=0.81  Score=41.06  Aligned_cols=61  Identities=23%  Similarity=0.168  Sum_probs=41.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKE  142 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~  142 (369)
                      |++.|.|+||.||..+...+.+.  .++|+.++  +|.+.+.+...+++... ...|-...+.+++
T Consensus        10 ~~~lItGa~g~iG~~~a~~l~~~--g~~V~~~~--r~~~~~~~~~~~~~~~~-~~~D~~~~~~v~~   70 (245)
T PRK07060         10 KSVLVTGASSGIGRACAVALAQR--GARVVAAA--RNAAALDRLAGETGCEP-LRLDVGDDAAIRA   70 (245)
T ss_pred             CEEEEeCCcchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHhCCeE-EEecCCCHHHHHH
Confidence            68999999999999999999886  56777654  56667766666655433 3344444333433

>PRK09134 short chain dehydrogenase; Provisional

Probab=92.52  E-value=1  Score=41.29  Aligned_cols=65  Identities=20%  Similarity=0.229  Sum_probs=40.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHH---HHHHHHhhCCCEE-EEcCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITL---LADQVKRFKPQVV-AVRNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~l---L~eQ~~~FkP~~V-~v~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||....+.+.++  .++|+.+.. ++-+.   +.+++++-..+.. ...|-.+.+.+.+.
T Consensus         9 ~k~vlItGas~giG~~la~~l~~~--g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   77 (258)
T PRK09134          9 PRAALVTGAARRIGRAIALDLAAH--GFDVAVHYN-RSRDEAEALAAEIRALGRRAVALQADLADEAEVRAL   77 (258)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeC-CCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence            358999999999999999999875  467776543 34333   3444433233332 23454445555544

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=92.50  E-value=1.2  Score=39.69  Aligned_cols=44  Identities=23%  Similarity=0.289  Sum_probs=31.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK  122 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~  122 (369)
                      +|+|.|.|+||.||.....-+.+.  .++|+.+. .++-+.+.+...
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~--g~~v~~~~-~r~~~~~~~~~~   48 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKE--GAKVVIAY-DINEEAAQELLE   48 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEc-CCCHHHHHHHHH
Confidence            468999999999999999888765  57877662 234444444333

>PLN02240 UDP-glucose 4-epimerase

Probab=92.48  E-value=0.85  Score=43.66  Aligned_cols=31  Identities=29%  Similarity=0.473  Sum_probs=27.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      |+|.|.|+||.||....+-+.+.  .++|+++.
T Consensus         6 ~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~   36 (352)
T PLN02240          6 RTILVTGGAGYIGSHTVLQLLLA--GYKVVVID   36 (352)
T ss_pred             CEEEEECCCChHHHHHHHHHHHC--CCEEEEEe
Confidence            68999999999999999998875  57898885

>PRK06128 oxidoreductase; Provisional

Probab=92.48  E-value=1.3  Score=42.08  Aligned_cols=65  Identities=11%  Similarity=0.041  Sum_probs=40.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC---CHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS---NITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~---Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      |++.|.|+||.||....+-+.+.  .++|+...-..   +.+.+.+.++.+..+...+ .|-.+.+.+++.
T Consensus        56 k~vlITGas~gIG~~~a~~l~~~--G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~  124 (300)
T PRK06128         56 RKALITGADSGIGRATAIAFARE--GADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQL  124 (300)
T ss_pred             CEEEEecCCCcHHHHHHHHHHHc--CCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH
Confidence            78999999999999999999875  56776543322   2344555555554444333 444444444443

>PRK07102 short chain dehydrogenase; Provisional

Probab=92.48  E-value=0.84  Score=41.32  Aligned_cols=43  Identities=21%  Similarity=0.210  Sum_probs=32.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK  122 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~  122 (369)
                      +|++.|.|+||.||..+.+-+.+.  .++|+++.  +|.+.+.+...
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~--G~~Vi~~~--r~~~~~~~~~~   43 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAA--GARLYLAA--RDVERLERLAD   43 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhc--CCEEEEEe--CCHHHHHHHHH
Confidence            468999999999999999998875  57777764  44555544333

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=92.47  E-value=1.6  Score=41.75  Aligned_cols=46  Identities=11%  Similarity=0.282  Sum_probs=34.6

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      ..|++.|.|+||.||..+...+.+.  .++|+.+.  +|.+.+.+...+.
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~--G~~V~~~~--r~~~~~~~~~~~l   50 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKR--GWHVIMAC--RNLKKAEAAAQEL   50 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHh
Confidence            3578999999999999999998876  47776653  5666665555544

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=92.45  E-value=1.2  Score=41.14  Aligned_cols=46  Identities=17%  Similarity=0.211  Sum_probs=34.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+. .+.+|.+.+.+.+++.
T Consensus         8 ~k~vlItGas~gIG~~ia~~l~~~--G~~v~~-~~~~~~~~~~~~~~~~   53 (260)
T PRK08416          8 GKTLVISGGTRGIGKAIVYEFAQS--GVNIAF-TYNSNVEEANKIAEDL   53 (260)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEE-EcCCCHHHHHHHHHHH
Confidence            468999999999999999988875  566654 4556776665555443

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=92.42  E-value=0.52  Score=42.83  Aligned_cols=64  Identities=19%  Similarity=0.091  Sum_probs=44.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANV  147 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~  147 (369)
                      ++|.|+|+||.||+.+++-+.+.  .++|++++  +|-+.+....  ... -+...|-...+.+...+.+.
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~--~~~v~~~~--r~~~~~~~~~--~~v-~~~~~d~~~~~~l~~a~~G~   64 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLAR--GHEVRAAV--RNPEAAAALA--GGV-EVVLGDLRDPKSLVAGAKGV   64 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhC--CCEEEEEE--eCHHHHHhhc--CCc-EEEEeccCCHhHHHHHhccc
Confidence            36999999999999999999987  78888876  5666665554  332 23334444555566655543

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=92.40  E-value=0.94  Score=43.23  Aligned_cols=39  Identities=26%  Similarity=0.444  Sum_probs=31.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD  119 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~e  119 (369)
                      +||+|+|+||=+|+-.++=..+.  .-+|+|++  +|-.++.+
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~R--GHeVTAiv--Rn~~K~~~   39 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKR--GHEVTAIV--RNASKLAA   39 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhC--CCeeEEEE--eChHhccc
Confidence            47999999999999998876654  68899988  66677754

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=92.34  E-value=0.22  Score=50.00  Aligned_cols=37  Identities=27%  Similarity=0.464  Sum_probs=31.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHH--hCCCceEEEEEeecCC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVA--EHEDKFRVVALAAGSN  113 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~--~~pd~F~VvaLaag~N  113 (369)
                      |.+|+|+||||.+|...++.+.  .||. ++++.++..+.
T Consensus         4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~-~~l~~v~s~~~   42 (336)
T PRK05671          4 PLDIAVVGATGTVGEALVQILEERDFPV-GTLHLLASSES   42 (336)
T ss_pred             CCEEEEEccCCHHHHHHHHHHhhCCCCc-eEEEEEECccc
Confidence            3689999999999999999999  6776 78888876543

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=92.30  E-value=1.2  Score=44.99  Aligned_cols=139  Identities=18%  Similarity=0.190  Sum_probs=83.0

Q ss_pred             CCCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCc
Q 017567           72 TWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKP  151 (369)
Q Consensus        72 ~~~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~  151 (369)
                      .+...++|.|+|++|.+|+.++.+.+...  |..+.-+|..+-..|   ++++..+.|.=.++..+   .+.        
T Consensus       154 ~~~~g~~vLv~ggsggVG~~aiQlAk~~~--~~~v~t~~s~e~~~l---~k~lGAd~vvdy~~~~~---~e~--------  217 (347)
T KOG1198|consen  154 KLSKGKSVLVLGGSGGVGTAAIQLAKHAG--AIKVVTACSKEKLEL---VKKLGADEVVDYKDENV---VEL--------  217 (347)
T ss_pred             ccCCCCeEEEEeCCcHHHHHHHHHHHhcC--CcEEEEEcccchHHH---HHHcCCcEeecCCCHHH---HHH--------
Confidence            55666799999999999999999999874  666666666554444   67777777653333211   111        


Q ss_pred             eEEecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeecccchhHHhhhcCCeEeecccchhhH
Q 017567          152 EILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAI  231 (369)
Q Consensus       152 ~v~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~~~~IlPVDSEHsAI  231 (369)
                              ++... ...+|+|++.+.|. -+...+..+..+.+.+     -+...|......-..        |     .
T Consensus       218 --------~kk~~-~~~~DvVlD~vg~~-~~~~~~~~l~~~g~~~-----~i~~~~~~~~~~~~~--------~-----~  269 (347)
T KOG1198|consen  218 --------IKKYT-GKGVDVVLDCVGGS-TLTKSLSCLLKGGGGA-----YIGLVGDELANYKLD--------D-----L  269 (347)
T ss_pred             --------HHhhc-CCCccEEEECCCCC-ccccchhhhccCCceE-----EEEeccccccccccc--------c-----c
Confidence                    11112 34699999998886 5555555555554443     334444443221111        1     1


Q ss_pred             HHhhcCCCCCccceEEEeecCCCCCCCC
Q 017567          232 FQCIQGLPEGALRRIILTASGGAFRDWP  259 (369)
Q Consensus       232 fQ~L~g~~~~~v~kiiLTASGGPFr~~~  259 (369)
                      ||    . ...++...++..|.+|+...
T Consensus       270 ~~----~-~~~~~~~~~~~~~~~~~~~~  292 (347)
T KOG1198|consen  270 WQ----S-ANGIKLYSLGLKGVNYRWLY  292 (347)
T ss_pred             hh----h-hhhhhheeeeeeccceeeee
Confidence            22    1 23456677777777776543

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=92.28  E-value=2.9  Score=41.89  Aligned_cols=62  Identities=16%  Similarity=0.267  Sum_probs=38.6

Q ss_pred             EeecccchhhHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHH
Q 017567          221 ILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLE  296 (369)
Q Consensus       221 IlPVDSEHsAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLE  296 (369)
                      .+|.|.-..| |+.+.+.   ..-|++|+    |+|.++.+++...-    -+-|+=-  .|+-+|-..+-||--|
T Consensus       343 ~~~l~~~~~A-~~~~~~~---~~gKvvl~----~~~~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~~~~  404 (410)
T cd08238         343 IGGLNAAAET-TLNLPGI---PGGKKLIY----TQKPLPLTGIEELA----DKEPEEP--AAIVLENGGIWNKEAE  404 (410)
T ss_pred             EecHHHHHHH-HHHhhcc---CCceEEEE----CCCCCCCchhHhhH----hhcCCCh--HHHHHhcCCcCCHHHH
Confidence            4566654444 6666632   34578887    57777776665432    2334322  6888999999998544

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=92.28  E-value=0.46  Score=45.81  Aligned_cols=32  Identities=25%  Similarity=0.325  Sum_probs=27.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      |+|.|.|+||+||....+-+.+.  .++|+++.-
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~--G~~V~~~~r   32 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEK--GYEVHGLIR   32 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHC--CCEEEEEec
Confidence            58999999999999999988775  678888753

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=92.24  E-value=1.4  Score=41.28  Aligned_cols=94  Identities=17%  Similarity=0.149  Sum_probs=60.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      .+|.|.|++|.+|..++.+.+..  ..+|++.+.  +-++ .+.++++..+.+.-..+...   .+              
T Consensus       145 ~~vlI~ga~g~vG~~aiqlA~~~--G~~vi~~~~--s~~~-~~~l~~~Ga~~vi~~~~~~~---~~--------------  202 (329)
T cd08294         145 ETVVVNGAAGAVGSLVGQIAKIK--GCKVIGCAG--SDDK-VAWLKELGFDAVFNYKTVSL---EE--------------  202 (329)
T ss_pred             CEEEEecCccHHHHHHHHHHHHc--CCEEEEEeC--CHHH-HHHHHHcCCCEEEeCCCccH---HH--------------
Confidence            58999999999999999999986  567776653  2233 35566777776654332211   11              


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCcee
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~ia  196 (369)
                        .+.++.. ..+|+|++.+.| ..+...+.+++.+=++.
T Consensus       203 --~v~~~~~-~gvd~vld~~g~-~~~~~~~~~l~~~G~iv  238 (329)
T cd08294         203 --ALKEAAP-DGIDCYFDNVGG-EFSSTVLSHMNDFGRVA  238 (329)
T ss_pred             --HHHHHCC-CCcEEEEECCCH-HHHHHHHHhhccCCEEE
Confidence              1222222 358999998766 56666777776654443

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK07478 short chain dehydrogenase; Provisional

Probab=92.23  E-value=1.3  Score=40.42  Aligned_cols=62  Identities=19%  Similarity=0.179  Sum_probs=38.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH---HHHhhCCCEEEE-cCchhHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD---QVKRFKPQVVAV-RNESLLDEIKE  142 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~e---Q~~~FkP~~V~v-~de~~~~~l~~  142 (369)
                      |++.|.|+||.||..+.+-+.+.  .++|+.++  +|.+.+.+   ++++...+...+ .|-...+.+++
T Consensus         7 k~~lItGas~giG~~ia~~l~~~--G~~v~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   72 (254)
T PRK07478          7 KVAIITGASSGIGRAAAKLFARE--GAKVVVGA--RRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKA   72 (254)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Confidence            68999999999999999988876  56777664  34444444   444433333332 34444444443

>PRK06914 short chain dehydrogenase; Provisional

Probab=92.15  E-value=1.3  Score=40.92  Aligned_cols=39  Identities=23%  Similarity=0.202  Sum_probs=29.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD  119 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~e  119 (369)
                      |.+.|.|+||.||.+..+-+.+.  .++|++++  ++.+.+.+
T Consensus         4 k~~lItGasg~iG~~la~~l~~~--G~~V~~~~--r~~~~~~~   42 (280)
T PRK06914          4 KIAIVTGASSGFGLLTTLELAKK--GYLVIATM--RNPEKQEN   42 (280)
T ss_pred             CEEEEECCCchHHHHHHHHHHhC--CCEEEEEe--CCHHHHHH
Confidence            57999999999999999988875  68887764  34444433

>PRK07063 short chain dehydrogenase; Provisional

Probab=92.11  E-value=1.4  Score=40.36  Aligned_cols=45  Identities=18%  Similarity=0.130  Sum_probs=33.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      .|++.|.|+||.||..+.+.+.+.  .++|+.+.  +|.+.+.+.++++
T Consensus         7 ~k~vlVtGas~gIG~~~a~~l~~~--G~~vv~~~--r~~~~~~~~~~~~   51 (260)
T PRK07063          7 GKVALVTGAAQGIGAAIARAFARE--GAAVALAD--LDAALAERAAAAI   51 (260)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHH
Confidence            468999999999999999999876  56777654  4555555555444

>PRK07904 short chain dehydrogenase; Provisional

Probab=92.08  E-value=2.1  Score=39.76  Aligned_cols=35  Identities=31%  Similarity=0.415  Sum_probs=27.6

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        74 ~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      +.+|+|.|.|+||-||....+-+.+.. .++|+.++
T Consensus         6 ~~~~~vlItGas~giG~~la~~l~~~g-g~~V~~~~   40 (253)
T PRK07904          6 GNPQTILLLGGTSEIGLAICERYLKNA-PARVVLAA   40 (253)
T ss_pred             CCCcEEEEEcCCcHHHHHHHHHHHhcC-CCeEEEEe
Confidence            457789999999999999998876642 37777653

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=92.07  E-value=1.3  Score=39.87  Aligned_cols=41  Identities=27%  Similarity=0.242  Sum_probs=30.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ  120 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ  120 (369)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|.+.+.+.
T Consensus         3 ~~~ilItGas~~iG~~la~~l~~~--g~~v~~~~--r~~~~~~~~   43 (250)
T TIGR03206         3 DKTAIVTGGGGGIGGATCRRFAEE--GAKVAVFD--LNREAAEKV   43 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEec--CCHHHHHHH
Confidence            368999999999999999988875  67776654  344444433

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK09072 short chain dehydrogenase; Provisional

Probab=92.06  E-value=2.1  Score=39.28  Aligned_cols=44  Identities=23%  Similarity=0.347  Sum_probs=32.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~  123 (369)
                      .+++.|.|+||.||.....-+.+.  .++|++++  +|.+.+.+...+
T Consensus         5 ~~~vlItG~s~~iG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~   48 (263)
T PRK09072          5 DKRVLLTGASGGIGQALAEALAAA--GARLLLVG--RNAEKLEALAAR   48 (263)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHH
Confidence            357999999999999999988875  67887765  455555444333

>PRK06841 short chain dehydrogenase; Provisional

Probab=92.01  E-value=1.1  Score=40.56  Aligned_cols=32  Identities=28%  Similarity=0.352  Sum_probs=27.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      |++.|.|+||.||....+.+.+.  .++|+.++-
T Consensus        16 k~vlItGas~~IG~~la~~l~~~--G~~Vi~~~r   47 (255)
T PRK06841         16 KVAVVTGGASGIGHAIAELFAAK--GARVALLDR   47 (255)
T ss_pred             CEEEEECCCChHHHHHHHHHHHC--CCEEEEEeC
Confidence            68999999999999999998875  678876653

>PRK07832 short chain dehydrogenase; Provisional

Probab=91.99  E-value=1.5  Score=40.66  Aligned_cols=43  Identities=23%  Similarity=0.183  Sum_probs=31.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~  123 (369)
                      |++.|.|+||.||......+.+.  .++|+.+  ++|.+.+.+.+.+
T Consensus         1 k~vlItGas~giG~~la~~la~~--G~~vv~~--~r~~~~~~~~~~~   43 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQ--GAELFLT--DRDADGLAQTVAD   43 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHH
Confidence            47999999999999999998875  5777654  3455655544444

>PRK05875 short chain dehydrogenase; Provisional

Probab=91.98  E-value=1.8  Score=39.92  Aligned_cols=39  Identities=21%  Similarity=0.182  Sum_probs=30.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD  119 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~e  119 (369)
                      |++.|.|+||.||....+-+.+.  .++|+++.  ++.+.+.+
T Consensus         8 k~vlItGasg~IG~~la~~l~~~--G~~V~~~~--r~~~~~~~   46 (276)
T PRK05875          8 RTYLVTGGGSGIGKGVAAGLVAA--GAAVMIVG--RNPDKLAA   46 (276)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHC--CCeEEEEe--CCHHHHHH
Confidence            68999999999999999988875  67887764  34444433

>PRK06924 short chain dehydrogenase; Provisional

Probab=91.94  E-value=0.9  Score=41.14  Aligned_cols=64  Identities=9%  Similarity=0.225  Sum_probs=39.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEE-EEcCchhHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVV-AVRNESLLDEIKE  142 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V-~v~de~~~~~l~~  142 (369)
                      ||++.|.|+||.||.+..+-+.++  .++|+.++ ++..+.+.+...+...+.. ...|-...+.++.
T Consensus         1 ~k~vlItGasggiG~~ia~~l~~~--g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   65 (251)
T PRK06924          1 MRYVIITGTSQGLGEAIANQLLEK--GTHVISIS-RTENKELTKLAEQYNSNLTFHSLDLQDVHELET   65 (251)
T ss_pred             CcEEEEecCCchHHHHHHHHHHhc--CCEEEEEe-CCchHHHHHHHhccCCceEEEEecCCCHHHHHH
Confidence            478999999999999999988775  57787764 3322445544444444332 2234333444443

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=91.91  E-value=0.46  Score=50.62  Aligned_cols=53  Identities=17%  Similarity=0.167  Sum_probs=40.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEE-EEeecCCHHHHHHHHHhhCCCEEEE
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVV-ALAAGSNITLLADQVKRFKPQVVAV  131 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~Vv-aLaag~Nv~lL~eQ~~~FkP~~V~v  131 (369)
                      +||.|.|+||+||+...+.+.+.  .++|. +..--.+.+.+.+.+++++|++|.=
T Consensus       381 mkiLVtGa~G~iG~~l~~~L~~~--g~~v~~~~~~l~d~~~v~~~i~~~~pd~Vih  434 (668)
T PLN02260        381 LKFLIYGRTGWIGGLLGKLCEKQ--GIAYEYGKGRLEDRSSLLADIRNVKPTHVFN  434 (668)
T ss_pred             ceEEEECCCchHHHHHHHHHHhC--CCeEEeeccccccHHHHHHHHHhhCCCEEEE
Confidence            57999999999999999988765  46663 3222356777888888899998873

>PRK05872 short chain dehydrogenase; Provisional

Probab=91.86  E-value=1.7  Score=41.27  Aligned_cols=45  Identities=16%  Similarity=0.179  Sum_probs=35.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK  125 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~Fk  125 (369)
                      |++.|.|+||.||..+...+.+.  .++|+.+  ++|.+.+.+..+++.
T Consensus        10 k~vlItGas~gIG~~ia~~l~~~--G~~V~~~--~r~~~~l~~~~~~l~   54 (296)
T PRK05872         10 KVVVVTGAARGIGAELARRLHAR--GAKLALV--DLEEAELAALAAELG   54 (296)
T ss_pred             CEEEEECCCchHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHhc
Confidence            68999999999999999999876  4666654  357777777766664

>cd08293 PTGR2 Prostaglandin reductase

Probab=91.82  E-value=2.1  Score=40.75  Aligned_cols=95  Identities=13%  Similarity=0.080  Sum_probs=58.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .+|.|.|++|.+|..++.+.+..  .. +|++.+.  +-+++....+++..+.+.-.++..   +.+             
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~--G~~~Vi~~~~--s~~~~~~~~~~lGa~~vi~~~~~~---~~~-------------  215 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLL--GCSRVVGICG--SDEKCQLLKSELGFDAAINYKTDN---VAE-------------  215 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHc--CCCEEEEEcC--CHHHHHHHHHhcCCcEEEECCCCC---HHH-------------
Confidence            68999999999999999998876  45 5776543  334433323347766655433221   111             


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCcee
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~ia  196 (369)
                         .+.++.. ..+|+|+++..|. .+.-.+.+++.+=++.
T Consensus       216 ---~i~~~~~-~gvd~vid~~g~~-~~~~~~~~l~~~G~iv  251 (345)
T cd08293         216 ---RLRELCP-EGVDVYFDNVGGE-ISDTVISQMNENSHII  251 (345)
T ss_pred             ---HHHHHCC-CCceEEEECCCcH-HHHHHHHHhccCCEEE
Confidence               1222222 3589999976654 3566677776655543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK09242 tropinone reductase; Provisional

Probab=91.82  E-value=1.7  Score=39.69  Aligned_cols=43  Identities=16%  Similarity=0.160  Sum_probs=32.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~  123 (369)
                      |++.|.|+||.||..+.+.+.+.  .++|+.+.  +|.+.+.+...+
T Consensus        10 k~~lItGa~~gIG~~~a~~l~~~--G~~v~~~~--r~~~~~~~~~~~   52 (257)
T PRK09242         10 QTALITGASKGIGLAIAREFLGL--GADVLIVA--RDADALAQARDE   52 (257)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHc--CCEEEEEe--CCHHHHHHHHHH
Confidence            68999999999999999999875  56776664  455555544443

>PLN02427 UDP-apiose/xylose synthase

Probab=91.80  E-value=0.27  Score=48.35  Aligned_cols=35  Identities=26%  Similarity=0.433  Sum_probs=29.0

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        74 ~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      ..+++|.|.|+||+||.+.++-+.+. ..++|+++.
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~-~g~~V~~l~   46 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTE-TPHKVLALD   46 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhc-CCCEEEEEe
Confidence            44578999999999999999988765 247899886

>PLN02572 UDP-sulfoquinovose synthase

Probab=91.80  E-value=0.77  Score=47.09  Aligned_cols=32  Identities=22%  Similarity=0.333  Sum_probs=27.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      .|+|.|.|+||+||....+-+.+.  .++|+++.
T Consensus        47 ~k~VLVTGatGfIGs~Lv~~L~~~--G~~V~~~d   78 (442)
T PLN02572         47 KKKVMVIGGDGYCGWATALHLSKR--GYEVAIVD   78 (442)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEe
Confidence            367999999999999999988875  57888863

>PRK07109 short chain dehydrogenase; Provisional

Probab=91.79  E-value=1.4  Score=43.15  Aligned_cols=63  Identities=19%  Similarity=0.268  Sum_probs=40.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHH---HHHHHhhCCCEEEE-cCchhHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLL---ADQVKRFKPQVVAV-RNESLLDEIKE  142 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL---~eQ~~~FkP~~V~v-~de~~~~~l~~  142 (369)
                      .|+|+|.|+||.||..+.+-+.+.  .++|+.++  +|-+.+   .+++++...+...+ .|-.+.+.+++
T Consensus         8 ~k~vlITGas~gIG~~la~~la~~--G~~Vvl~~--R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~   74 (334)
T PRK07109          8 RQVVVITGASAGVGRATARAFARR--GAKVVLLA--RGEEGLEALAAEIRAAGGEALAVVADVADAEAVQA   74 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHH
Confidence            368999999999999999988875  57777654  444444   44455544444332 44444444444

>PRK06483 dihydromonapterin reductase; Provisional

Probab=91.75  E-value=1.8  Score=39.04  Aligned_cols=62  Identities=18%  Similarity=0.102  Sum_probs=39.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKE  142 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~  142 (369)
                      +|++.|.|+||.||..+..-+.+.  .++|+.+.  +|-+.+.+.+++.... +...|-.+.+.+++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~   63 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQ--GQPVIVSY--RTHYPAIDGLRQAGAQ-CIQADFSTNAGIMA   63 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHC--CCeEEEEe--CCchhHHHHHHHcCCE-EEEcCCCCHHHHHH
Confidence            468999999999999999988875  67887754  3334444555544422 23344444444443

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=91.70  E-value=0.58  Score=45.92  Aligned_cols=50  Identities=16%  Similarity=0.275  Sum_probs=40.7

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCE
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQV  128 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~  128 (369)
                      .+++++|.|||+=||...-+.+.++  .|.|+-++  ++.++|.++.++..=++
T Consensus         5 ~~~~~lITGASsGIG~~~A~~lA~~--g~~liLva--R~~~kL~~la~~l~~~~   54 (265)
T COG0300           5 KGKTALITGASSGIGAELAKQLARR--GYNLILVA--RREDKLEALAKELEDKT   54 (265)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHC--CCEEEEEe--CcHHHHHHHHHHHHHhh
Confidence            4578999999999999999999987  56666544  67898888888877555

>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase

Probab=91.69  E-value=1.8  Score=43.38  Aligned_cols=109  Identities=21%  Similarity=0.198  Sum_probs=67.5

Q ss_pred             eEEEEecCChHhHHHHHHHHhCC--CceEEEEEeecCCHHHHHHHHH------hhCCCEEEEcCchhHHHHHHHHhcCCC
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHE--DKFRVVALAAGSNITLLADQVK------RFKPQVVAVRNESLLDEIKEALANVEE  149 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~p--d~F~VvaLaag~Nv~lL~eQ~~------~FkP~~V~v~de~~~~~l~~~l~~~~~  149 (369)
                      ||+|.|. |=||+..++++.+.+  ++|+|+++.--...+-++.+.+      +|+- -|...+..        +.-.+.
T Consensus         1 ~IaInGf-GrIGR~vlr~l~e~~~~~~~~vvaInd~~~~~~~ayll~yDS~hg~~~~-~v~~~~~~--------l~v~g~   70 (325)
T TIGR01532         1 RVAINGF-GRIGRNVLRALYESGERLGIEVVALNELADQASMAHLLRYDTSHGRFPG-EVKVDGDC--------LHVNGD   70 (325)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCCeEEEEEecCCCHHHHHHHHhhCccCCCCCC-cEEEeCCE--------EEECCe
Confidence            5999999 999999999988765  5799999976556665554443      2211 11111110        000012


Q ss_pred             CceEEecHHHHHHHh-cCCCCCEEEEeccCccCcHHHHHHHHcC-Cceee
Q 017567          150 KPEILAGEQGVIEAA-RHPDAVTVVTGIVGCAGLKPTVAAIEAG-KDIAL  197 (369)
Q Consensus       150 ~~~v~~G~~gl~~~~-~~~~~D~Vv~AIvG~aGL~pt~~Ai~~g-K~iaL  197 (369)
                      .++++.- ....++- ...++|+|+.+.-.+.-.+-...++++| |.|-+
T Consensus        71 ~i~v~~~-~~p~~~~w~~~gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~  119 (325)
T TIGR01532        71 CIRVLHS-PTPEALPWRALGVDLVLDCTGVYGNREQGERHIRAGAKRVLF  119 (325)
T ss_pred             EEEEEEc-CChhhccccccCCCEEEEccchhccHHHHHHHHHcCCeEEEe
Confidence            2334322 2233322 2347999999988888888888999999 44444

Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=91.69  E-value=1.8  Score=39.46  Aligned_cols=43  Identities=21%  Similarity=0.183  Sum_probs=31.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK  122 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~  122 (369)
                      .|++.|.|+||.||....+.+.++  .++|+.+.  +|.+.+.+...
T Consensus        11 ~k~ilItGas~~IG~~la~~l~~~--G~~v~~~~--r~~~~~~~~~~   53 (256)
T PRK06124         11 GQVALVTGSARGLGFEIARALAGA--GAHVLVNG--RNAATLEAAVA   53 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHc--CCeEEEEe--CCHHHHHHHHH
Confidence            568999999999999999998875  57777653  34444444333

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=91.65  E-value=0.54  Score=45.23  Aligned_cols=33  Identities=18%  Similarity=0.325  Sum_probs=26.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      ||+|.|.|+||+||+...+-+.+.  .++++.+..
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~--g~~~v~~~~   33 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINE--TSDAVVVVD   33 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHc--CCCEEEEEe
Confidence            478999999999999999998864  355555443

>PRK06197 short chain dehydrogenase; Provisional

Probab=91.65  E-value=1.3  Score=42.00  Aligned_cols=39  Identities=21%  Similarity=0.205  Sum_probs=30.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD  119 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~e  119 (369)
                      |+|.|.|+||.||..+.+.+.+.  .++|+.+.  +|.+.+.+
T Consensus        17 k~vlItGas~gIG~~~a~~l~~~--G~~vi~~~--r~~~~~~~   55 (306)
T PRK06197         17 RVAVVTGANTGLGYETAAALAAK--GAHVVLAV--RNLDKGKA   55 (306)
T ss_pred             CEEEEcCCCCcHHHHHHHHHHHC--CCEEEEEe--CCHHHHHH
Confidence            68999999999999999988876  56776643  45555443

>PRK07201 short chain dehydrogenase; Provisional

Probab=91.61  E-value=0.51  Score=49.44  Aligned_cols=47  Identities=19%  Similarity=0.250  Sum_probs=36.6

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      +|.|.|+||+||...++-+.+++..++|++++-......+.++...+
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~   48 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYW   48 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhc
Confidence            69999999999999999998766789999998655555555544333

>PRK06198 short chain dehydrogenase; Provisional

Probab=91.57  E-value=1.4  Score=40.10  Aligned_cols=31  Identities=26%  Similarity=0.221  Sum_probs=24.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceE-EEEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFR-VVAL  108 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~-VvaL  108 (369)
                      .|++.|.|+||.||.+..+.+.+.  .++ |+.+
T Consensus         6 ~k~vlItGa~g~iG~~la~~l~~~--G~~~V~~~   37 (260)
T PRK06198          6 GKVALVTGGTQGLGAAIARAFAER--GAAGLVIC   37 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHC--CCCeEEEE
Confidence            367999999999999999999875  455 5443

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=91.56  E-value=1.9  Score=36.60  Aligned_cols=47  Identities=19%  Similarity=0.274  Sum_probs=33.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKP  126 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP  126 (369)
                      .++|+|+|+ |.+|.....-+.+.. -.+|.. . ++|.+.+.+.++++..
T Consensus        19 ~~~i~iiG~-G~~g~~~a~~l~~~g-~~~v~v-~-~r~~~~~~~~~~~~~~   65 (155)
T cd01065          19 GKKVLILGA-GGAARAVAYALAELG-AAKIVI-V-NRTLEKAKALAERFGE   65 (155)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCC-CCEEEE-E-cCCHHHHHHHHHHHhh
Confidence            468999997 999999999888763 233333 2 4677777777776653

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=91.51  E-value=1.3  Score=40.14  Aligned_cols=32  Identities=19%  Similarity=0.151  Sum_probs=27.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      +|.+.|.|+||.||.+..+-+.+.  .++|+.+.
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~--g~~vi~~~   33 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAA--GFDLAIND   33 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHC--CCEEEEEe
Confidence            367999999999999999999876  56787765

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=91.51  E-value=2.1  Score=40.21  Aligned_cols=95  Identities=8%  Similarity=0.056  Sum_probs=60.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      ..+|.|.|++|++|..++.+.+..  ..+|++++.  +-+.. +.++++..+.+.-.++..   +.              
T Consensus       140 ~~~vlI~ga~g~ig~~~~~~a~~~--g~~v~~~~~--~~~~~-~~~~~~g~~~v~~~~~~~---~~--------------  197 (329)
T cd08250         140 GETVLVTAAAGGTGQFAVQLAKLA--GCHVIGTCS--SDEKA-EFLKSLGCDRPINYKTED---LG--------------  197 (329)
T ss_pred             CCEEEEEeCccHHHHHHHHHHHHc--CCeEEEEeC--cHHHH-HHHHHcCCceEEeCCCcc---HH--------------
Confidence            357999999999999999999987  456766653  33333 344667765554322211   11              


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCcee
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~ia  196 (369)
                        +.+.+... ..+|.|++.+.| ..+...+..+..+-++.
T Consensus       198 --~~~~~~~~-~~vd~v~~~~g~-~~~~~~~~~l~~~g~~v  234 (329)
T cd08250         198 --EVLKKEYP-KGVDVVYESVGG-EMFDTCVDNLALKGRLI  234 (329)
T ss_pred             --HHHHHhcC-CCCeEEEECCcH-HHHHHHHHHhccCCeEE
Confidence              12222222 358999998655 67777888887665543

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK05650 short chain dehydrogenase; Provisional

Probab=91.47  E-value=2  Score=39.77  Aligned_cols=43  Identities=14%  Similarity=0.134  Sum_probs=31.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~  123 (369)
                      |+|.|.|+||.||....+.+.+.  .++|+.+.  ++.+.+.+...+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~--g~~V~~~~--r~~~~~~~~~~~   43 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWARE--GWRLALAD--VNEEGGEETLKL   43 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHH
Confidence            47999999999999999988876  56776543  455665554443

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=91.47  E-value=1.3  Score=39.94  Aligned_cols=64  Identities=13%  Similarity=0.168  Sum_probs=41.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      |++.|.|+||.||..+.+-+.+.  .++|+.+. .++.+.+.+...++..+..++ .|-...+.+++.
T Consensus         6 k~ilItGas~gIG~~la~~l~~~--G~~vv~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   70 (253)
T PRK08642          6 QTVLVTGGSRGLGAAIARAFARE--GARVVVNY-HQSEDAAEALADELGDRAIALQADVTDREQVQAM   70 (253)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHHC--CCeEEEEc-CCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHH
Confidence            68999999999999999988775  57777544 344555555555555444333 344444444443

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=91.42  E-value=1.2  Score=43.10  Aligned_cols=33  Identities=24%  Similarity=0.425  Sum_probs=27.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      |+|.|.|+||+||.+..+-+.+..+.++|+++.
T Consensus         5 k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~   37 (324)
T TIGR03589         5 KSILITGGTGSFGKAFISRLLENYNPKKIIIYS   37 (324)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEc
Confidence            679999999999999999887754346777764

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=91.39  E-value=2.3  Score=38.31  Aligned_cols=63  Identities=17%  Similarity=0.109  Sum_probs=40.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHH---HhhCCCE-EEEcCchhHHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQV---KRFKPQV-VAVRNESLLDEIKEA  143 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~---~~FkP~~-V~v~de~~~~~l~~~  143 (369)
                      |+|.|.|+||.||....+-+.+.  .++|+.+.  +|-+.+.+..   +...++. +...|-...+.+++.
T Consensus         5 ~~vlItG~sg~iG~~la~~l~~~--g~~v~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   71 (258)
T PRK12429          5 KVALVTGAASGIGLEIALALAKE--GAKVVIAD--LNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAG   71 (258)
T ss_pred             CEEEEECCCchHHHHHHHHHHHC--CCeEEEEe--CCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence            68999999999999999988775  67887763  4444444333   3334443 233454444445443

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=91.39  E-value=1.9  Score=39.79  Aligned_cols=64  Identities=16%  Similarity=0.109  Sum_probs=40.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCCEEE-EcCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQVVA-VRNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F---kP~~V~-v~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||.+..+-+.++  .++|+.+  .++-+.+.++..++   ..+... ..|-.+.+.++..
T Consensus        10 ~k~~lItGa~~~iG~~ia~~l~~~--G~~vv~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   77 (265)
T PRK07097         10 GKIALITGASYGIGFAIAKAYAKA--GATIVFN--DINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAM   77 (265)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCeEEEE--eCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            368999999999999999988876  5777765  34445554444443   223322 3444444444443

>TIGR02415 23BDH acetoin reductases

Probab=91.38  E-value=1.8  Score=39.11  Aligned_cols=31  Identities=26%  Similarity=0.313  Sum_probs=25.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      |++.|.|+||.||....+.+.+.  .++|+.+.
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~--G~~v~~~~   31 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKD--GFAVAVAD   31 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEe
Confidence            57999999999999999988875  56776664

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=91.32  E-value=2  Score=39.15  Aligned_cols=45  Identities=20%  Similarity=0.121  Sum_probs=33.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      .|++.|.|+||.||.++..-+.+.  .++|+.+  ++|.+.+.+...+.
T Consensus         9 ~k~~lItGas~giG~~ia~~L~~~--G~~vvl~--~r~~~~~~~~~~~l   53 (254)
T PRK08085          9 GKNILITGSAQGIGFLLATGLAEY--GAEIIIN--DITAERAELAVAKL   53 (254)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHc--CCEEEEE--cCCHHHHHHHHHHH
Confidence            468999999999999999999875  5777754  34555555544443

>TIGR01921 DAP-DH diaminopimelate dehydrogenase

Probab=91.32  E-value=1.1  Score=45.06  Aligned_cols=40  Identities=15%  Similarity=0.330  Sum_probs=33.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLL  117 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL  117 (369)
                      +.||+|+|. |.||+..+..+.++|+ |+++|+...+..+++
T Consensus         3 kIRVgIVG~-GnIGr~~a~al~~~pd-~ELVgV~dr~~~~~~   42 (324)
T TIGR01921         3 KIRAAIVGY-GNLGRSVEKAIQQQPD-MELVGVFSRRGAETL   42 (324)
T ss_pred             CcEEEEEee-cHHHHHHHHHHHhCCC-cEEEEEEcCCcHHHH
Confidence            358999997 9999999999998876 999998777644443

This model represents the diaminopimelate dehydrogenase enzyme which provides an alternate (shortcut) route of lysine buiosynthesis in Corynebacterium, Bacterioides, Porphyromonas and scattered other species. The enzyme from Corynebacterium glutamicum has been crystallized and characterized.

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=91.25  E-value=2.4  Score=38.23  Aligned_cols=65  Identities=26%  Similarity=0.261  Sum_probs=39.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHH---HHHHhhCCCEEE-EcCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLA---DQVKRFKPQVVA-VRNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~---eQ~~~FkP~~V~-v~de~~~~~l~~~  143 (369)
                      .|.+.|.|+||.||..+.+-+.+.  .++|+.+.. ++.+...   +.+++...+.+. ..|-.+.+.+.+.
T Consensus         3 ~k~~lVtG~s~giG~~~a~~l~~~--G~~vv~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   71 (246)
T PRK12938          3 QRIAYVTGGMGGIGTSICQRLHKD--GFKVVAGCG-PNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAA   71 (246)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHc--CCEEEEEcC-CChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence            367999999999999999999887  567776543 3333332   333333333332 2444444444443

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=91.24  E-value=2.4  Score=38.72  Aligned_cols=31  Identities=23%  Similarity=0.324  Sum_probs=26.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      |+|.|.|+||.||..+.+-+.+.  .++|+.+.
T Consensus         3 k~ilItG~~~~IG~~la~~l~~~--g~~vi~~~   33 (259)
T PRK12384          3 QVAVVIGGGQTLGAFLCHGLAEE--GYRVAVAD   33 (259)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHC--CCEEEEEE
Confidence            57999999999999999999876  57776653

>TIGR01746 Thioester-redct thioester reductase domain

Probab=91.22  E-value=0.55  Score=44.17  Aligned_cols=36  Identities=19%  Similarity=0.402  Sum_probs=29.7

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN  113 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~N  113 (369)
                      +|.|.|+||+||...++-+.+.....+|+++.-..+
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~   36 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAAS   36 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCC
Confidence            488999999999999998887755578999875544

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=91.20  E-value=2.3  Score=39.13  Aligned_cols=44  Identities=23%  Similarity=0.205  Sum_probs=31.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      +++.|.|++|.||..+.+-+.+.  .++|+.+  .+|-+.+.+...+.
T Consensus         1 m~vlItGas~gIG~aia~~l~~~--G~~V~~~--~r~~~~~~~~~~~l   44 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKK--GARVVIS--SRNEENLEKALKEL   44 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHc--CCEEEEE--eCCHHHHHHHHHHH
Confidence            36999999999999999988875  5776654  34555555544443

>PRK07074 short chain dehydrogenase; Provisional

Probab=91.18  E-value=2.4  Score=38.58  Aligned_cols=43  Identities=26%  Similarity=0.261  Sum_probs=31.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~  123 (369)
                      |++.|.|+||.||....+-+.+.  .++|+++.  +|-+.+.+...+
T Consensus         3 k~ilItGat~~iG~~la~~L~~~--g~~v~~~~--r~~~~~~~~~~~   45 (257)
T PRK07074          3 RTALVTGAAGGIGQALARRFLAA--GDRVLALD--IDAAALAAFADA   45 (257)
T ss_pred             CEEEEECCcchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHH
Confidence            57999999999999999988875  57777765  455555444433

>PLN02253 xanthoxin dehydrogenase

Probab=91.14  E-value=2.3  Score=39.50  Aligned_cols=45  Identities=18%  Similarity=0.205  Sum_probs=32.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.  ++-+.+.+.+.+.
T Consensus        18 ~k~~lItGas~gIG~~la~~l~~~--G~~v~~~~--~~~~~~~~~~~~~   62 (280)
T PLN02253         18 GKVALVTGGATGIGESIVRLFHKH--GAKVCIVD--LQDDLGQNVCDSL   62 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHc--CCEEEEEe--CCHHHHHHHHHHh
Confidence            468999999999999999988876  57777653  3344444444443

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=91.10  E-value=2.4  Score=40.51  Aligned_cols=94  Identities=14%  Similarity=0.174  Sum_probs=60.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceE-EEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFR-VVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~-VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .+|.|+|+ |.||..++.+.+..  ..+ |+++.  ++-+++ +.++++..+.+.-..+...+                 
T Consensus       165 ~~vlV~G~-G~vG~~~~~~ak~~--G~~~vi~~~--~~~~~~-~~~~~~ga~~~i~~~~~~~~-----------------  221 (339)
T cd08239         165 DTVLVVGA-GPVGLGALMLARAL--GAEDVIGVD--PSPERL-ELAKALGADFVINSGQDDVQ-----------------  221 (339)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHc--CCCEEEEEC--CCHHHH-HHHHHhCCCEEEcCCcchHH-----------------
Confidence            58999986 99999999999886  345 76643  344554 45678877665432221111                 


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCcee
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~ia  196 (369)
                         .+.++.....+|+|+++..+-..+...+..++.+-++.
T Consensus       222 ---~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v  259 (339)
T cd08239         222 ---EIRELTSGAGADVAIECSGNTAARRLALEAVRPWGRLV  259 (339)
T ss_pred             ---HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEE
Confidence               12233333358999999777666677778887766554

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PRK05854 short chain dehydrogenase; Provisional

Probab=91.07  E-value=1.7  Score=41.88  Aligned_cols=41  Identities=17%  Similarity=0.063  Sum_probs=30.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ  120 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ  120 (369)
                      .|++.|.|+||.||..+...+.+.  .++|+.+  .+|.+++.+.
T Consensus        14 gk~~lITGas~GIG~~~a~~La~~--G~~Vil~--~R~~~~~~~~   54 (313)
T PRK05854         14 GKRAVVTGASDGLGLGLARRLAAA--GAEVILP--VRNRAKGEAA   54 (313)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHH
Confidence            368999999999999999999875  5777654  3455554433

>PLN02503 fatty acyl-CoA reductase 2

Probab=91.06  E-value=1.5  Score=47.53  Aligned_cols=42  Identities=14%  Similarity=0.223  Sum_probs=32.8

Q ss_pred             CCCCCeeEEEEecCChHhHHHHHHH-HhCCCceEEEEEeecCC
Q 017567           72 TWDGPKPISVLGSTGSIGTQTLDIV-AEHEDKFRVVALAAGSN  113 (369)
Q Consensus        72 ~~~~~kkI~ILGSTGSIGtqTLdVI-~~~pd~F~VvaLaag~N  113 (369)
                      .+-..|+|.|.|+||+||+..++-+ +..|+.-+|.+|.=.++
T Consensus       115 ~f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~  157 (605)
T PLN02503        115 EFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKD  157 (605)
T ss_pred             hhhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCC
Confidence            3444589999999999999999655 56788778999875444

>PRK12937 short chain dehydrogenase; Provisional

Probab=91.00  E-value=3.1  Score=37.29  Aligned_cols=65  Identities=17%  Similarity=0.188  Sum_probs=39.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHH---HHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITL---LADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~l---L~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||....+.+.+.  .++|+.+. .++-+.   +.+.++.+..+...+ .|-...+.+++.
T Consensus         5 ~~~vlItG~~~~iG~~la~~l~~~--g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   73 (245)
T PRK12937          5 NKVAIVTGASRGIGAAIARRLAAD--GFAVAVNY-AGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRL   73 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEec-CCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence            368999999999999999998876  56676543 444333   334444444333322 343444444443

>PRK05993 short chain dehydrogenase; Provisional

Probab=90.99  E-value=2.3  Score=39.70  Aligned_cols=41  Identities=20%  Similarity=0.266  Sum_probs=31.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ  120 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ  120 (369)
                      .|+|.|.|+||.||....+-+.+.  .++|++++  +|.+.+.+.
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~--G~~Vi~~~--r~~~~~~~l   44 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSD--GWRVFATC--RKEEDVAAL   44 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHH
Confidence            368999999999999999888764  67887754  556666544

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=90.99  E-value=3  Score=40.39  Aligned_cols=104  Identities=15%  Similarity=0.268  Sum_probs=62.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      .+|.|+|+ |+||..++.+.+..  ..+|+++.  ++-+++ +.++++..+.+.-..+...+.+.+.+..      . .+
T Consensus       168 ~~VlV~G~-G~vG~~a~~~a~~~--G~~vi~~~--~~~~~~-~~~~~~Ga~~~i~~~~~~~~~~~~~~~~------~-t~  234 (349)
T TIGR03201       168 DLVIVIGA-GGVGGYMVQTAKAM--GAAVVAID--IDPEKL-EMMKGFGADLTLNPKDKSAREVKKLIKA------F-AK  234 (349)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHc--CCeEEEEc--CCHHHH-HHHHHhCCceEecCccccHHHHHHHHHh------h-cc
Confidence            58999999 99999999999987  34676653  455555 4567888766543322222223322211      0 00


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeee
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALA  198 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLA  198 (369)
                      ..|+     ....|.|+.+..+..++.-.+.+++.|=++.+.
T Consensus       235 ~~g~-----d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~  271 (349)
T TIGR03201       235 ARGL-----RSTGWKIFECSGSKPGQESALSLLSHGGTLVVV  271 (349)
T ss_pred             cCCC-----CCCcCEEEECCCChHHHHHHHHHHhcCCeEEEE
Confidence            0110     011458888876666676677888777665543

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PRK12746 short chain dehydrogenase; Provisional

Probab=90.98  E-value=1.7  Score=39.40  Aligned_cols=45  Identities=20%  Similarity=0.194  Sum_probs=33.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      |++.|.|+||.||....+-+.+.  .++|+.+. .+|.+.+.+...++
T Consensus         7 ~~ilItGasg~iG~~la~~l~~~--G~~v~i~~-~r~~~~~~~~~~~~   51 (254)
T PRK12746          7 KVALVTGASRGIGRAIAMRLAND--GALVAIHY-GRNKQAADETIREI   51 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEc-CCCHHHHHHHHHHH
Confidence            68999999999999999988775  56665543 44566666655554

>PRK06701 short chain dehydrogenase; Provisional

Probab=90.95  E-value=2.9  Score=39.75  Aligned_cols=64  Identities=13%  Similarity=0.072  Sum_probs=39.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC--HHHHHHHHHhhCCCEEE-EcCchhHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN--ITLLADQVKRFKPQVVA-VRNESLLDEIKE  142 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~N--v~lL~eQ~~~FkP~~V~-v~de~~~~~l~~  142 (369)
                      |++.|.|+||.||....+-+.++  .++|+.+....+  .+.+.+.++....+... ..|-...+.+.+
T Consensus        47 k~iLItGasggIG~~la~~l~~~--G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~  113 (290)
T PRK06701         47 KVALITGGDSGIGRAVAVLFAKE--GADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKD  113 (290)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHH
Confidence            68999999999999999988876  567765544322  33444444443333322 244444444444

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=90.94  E-value=2.6  Score=38.00  Aligned_cols=44  Identities=20%  Similarity=0.142  Sum_probs=32.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~  123 (369)
                      .+++.|.|+||.||....+-+.+.  .++|+.+.  +|-+.+.+...+
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L~~~--G~~Vi~~~--r~~~~~~~~~~~   50 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIALAKE--GVNVGLLA--RTEENLKAVAEE   50 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHH
Confidence            368999999999999999988765  56777754  455555554443

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=90.90  E-value=1  Score=40.51  Aligned_cols=63  Identities=21%  Similarity=0.107  Sum_probs=39.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH---HHHhhCCCEEE-EcCchhHHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD---QVKRFKPQVVA-VRNESLLDEIKEA  143 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~e---Q~~~FkP~~V~-v~de~~~~~l~~~  143 (369)
                      |++.|.|+||+||....+-+.+.  .++|++++  +|.+.+.+   +.+....+... ..|-...+.++..
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~--g~~v~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   68 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAA--GANVVVND--LGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADM   68 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence            57999999999999999998875  56777764  33444433   33333333322 2444444444443

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK06139 short chain dehydrogenase; Provisional

Probab=90.90  E-value=1.4  Score=43.34  Aligned_cols=63  Identities=21%  Similarity=0.301  Sum_probs=40.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHH---HHhhCCCEEEE-cCchhHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ---VKRFKPQVVAV-RNESLLDEIKE  142 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ---~~~FkP~~V~v-~de~~~~~l~~  142 (369)
                      .|.+.|.|+||.||..+.+.+.+.  .++|+.++  +|-+.|.+.   ++++..+..++ .|-.+.+.+++
T Consensus         7 ~k~vlITGAs~GIG~aia~~la~~--G~~Vvl~~--R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~   73 (330)
T PRK06139          7 GAVVVITGASSGIGQATAEAFARR--GARLVLAA--RDEEALQAVAEECRALGAEVLVVPTDVTDADQVKA   73 (330)
T ss_pred             CCEEEEcCCCCHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHH
Confidence            368999999999999999999886  56776543  566666544   44444444332 34444444443

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=90.89  E-value=0.31  Score=48.37  Aligned_cols=33  Identities=30%  Similarity=0.619  Sum_probs=29.8

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (369)
                      ||+|+|+||.+|+..++.+.+||+ |+|+++...
T Consensus         2 kVaIvGatG~~G~~L~~~l~~~~~-~~l~~v~~~   34 (341)
T TIGR00978         2 RVAVLGATGLVGQKFVKLLAKHPY-FELAKVVAS   34 (341)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-ceEEEEEEC
Confidence            799999999999999999999876 899998654

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=90.89  E-value=0.42  Score=44.47  Aligned_cols=50  Identities=18%  Similarity=0.231  Sum_probs=37.0

Q ss_pred             EEEecCChHhHHHHHHHHhCCCceEEEEEeecC-----CHHHHHHHHHhhCCCEEEE
Q 017567           80 SVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS-----NITLLADQVKRFKPQVVAV  131 (369)
Q Consensus        80 ~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~-----Nv~lL~eQ~~~FkP~~V~v  131 (369)
                      .|+|+||+||++..+-+.+.  .++|+.+....     +.+.|.+..+.++|++|+-
T Consensus         1 lItGa~GfiG~~l~~~L~~~--g~~v~~~~~~~~~Dl~~~~~l~~~~~~~~~d~Vih   55 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEAL--GFTNLVLRTHKELDLTRQADVEAFFAKEKPTYVIL   55 (306)
T ss_pred             CcccCCCcccHHHHHHHHhC--CCcEEEeeccccCCCCCHHHHHHHHhccCCCEEEE
Confidence            38999999999999999875  55666554432     4556777777888987663

>PRK09291 short chain dehydrogenase; Provisional

Probab=90.88  E-value=0.95  Score=41.03  Aligned_cols=49  Identities=20%  Similarity=0.192  Sum_probs=34.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec-CCHHHHHHHHHhhCCC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-SNITLLADQVKRFKPQ  127 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag-~Nv~lL~eQ~~~FkP~  127 (369)
                      |+|.|.|+||.||....+-+.+.  .++|++++-. .+.+.+.+.++...++
T Consensus         3 ~~vlVtGasg~iG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~   52 (257)
T PRK09291          3 KTILITGAGSGFGREVALRLARK--GHNVIAGVQIAPQVTALRAEAARRGLA   52 (257)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCc
Confidence            57999999999999999998875  5788876532 1234444555544443

>PRK07775 short chain dehydrogenase; Provisional

Probab=90.79  E-value=2.7  Score=39.26  Aligned_cols=42  Identities=26%  Similarity=0.297  Sum_probs=31.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQV  121 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~  121 (369)
                      +|.+.|.|+||.||..+.+-+.+.  .++|+.++  +|.+.+.+..
T Consensus        10 ~~~vlVtGa~g~iG~~la~~L~~~--G~~V~~~~--r~~~~~~~~~   51 (274)
T PRK07775         10 RRPALVAGASSGIGAATAIELAAA--GFPVALGA--RRVEKCEELV   51 (274)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHH
Confidence            468999999999999999988875  57777654  3455554443

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=90.72  E-value=2.6  Score=35.58  Aligned_cols=83  Identities=14%  Similarity=0.183  Sum_probs=49.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHH---HhhCCCEEEE-cCchhHHHHHHHHhcCCCCce
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQV---KRFKPQVVAV-RNESLLDEIKEALANVEEKPE  152 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~---~~FkP~~V~v-~de~~~~~l~~~l~~~~~~~~  152 (369)
                      |.+.|.|+||=||.+..+-..+. ....|+.+.-+.+.+.+.+.+   +....+...+ .|-...+.+++.+..      
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~-g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~------   73 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARR-GARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEE------   73 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHT-TTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHH------
T ss_pred             CEEEEECCCCHHHHHHHHHHHhc-CceEEEEeeecccccccccccccccccccccccccccccccccccccccc------
Confidence            67999999999999999999887 334444443331344444444   4334444444 444444555554321      


Q ss_pred             EEecHHHHHHHhcCCCCCEEEEe
Q 017567          153 ILAGEQGVIEAARHPDAVTVVTG  175 (369)
Q Consensus       153 v~~G~~gl~~~~~~~~~D~Vv~A  175 (369)
                             +.  .+....|++++.
T Consensus        74 -------~~--~~~~~ld~li~~   87 (167)
T PF00106_consen   74 -------VI--KRFGPLDILINN   87 (167)
T ss_dssp             -------HH--HHHSSESEEEEE
T ss_pred             -------cc--cccccccccccc
Confidence                   11  233468999987

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=90.70  E-value=2.8  Score=38.29  Aligned_cols=38  Identities=21%  Similarity=0.177  Sum_probs=29.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLL  117 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL  117 (369)
                      |++.|.|+||.||.++.+.+.+.  .++|+.+. .++-+.+
T Consensus         8 k~~lItGas~gIG~~~a~~l~~~--G~~v~~~~-~~~~~~~   45 (255)
T PRK06463          8 KVALITGGTRGIGRAIAEAFLRE--GAKVAVLY-NSAENEA   45 (255)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHC--CCEEEEEe-CCcHHHH
Confidence            68999999999999999998876  56776543 4444443

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=90.66  E-value=1  Score=45.56  Aligned_cols=69  Identities=12%  Similarity=0.182  Sum_probs=44.9

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC----CCEEEEcCchhHHHHHHHHh
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK----PQVVAVRNESLLDEIKEALA  145 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~Fk----P~~V~v~de~~~~~l~~~l~  145 (369)
                      +.++|.|.||||+||.-.++.+-+.  .|+|.|.+=...-++-.+-.+++.    .-.++.+|=.+++.+++++.
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~r--GY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSR--GYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhC--CCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh
Confidence            5578999999999999999998876  899999775332233333444443    13444455444445555443

>PRK08862 short chain dehydrogenase; Provisional

Probab=90.65  E-value=2.4  Score=39.11  Aligned_cols=62  Identities=11%  Similarity=0.108  Sum_probs=40.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHH---HHHHHhhCCCEEEE-cCchhHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLL---ADQVKRFKPQVVAV-RNESLLDEIKE  142 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL---~eQ~~~FkP~~V~v-~de~~~~~l~~  142 (369)
                      |.+.|.|+|+-||.++...+.+.  .++|+.+  ++|.+.+   .+++++...+.+.+ .|-.+.+.+++
T Consensus         6 k~~lVtGas~GIG~aia~~la~~--G~~V~~~--~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~   71 (227)
T PRK08862          6 SIILITSAGSVLGRTISCHFARL--GATLILC--DQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRH   71 (227)
T ss_pred             eEEEEECCccHHHHHHHHHHHHC--CCEEEEE--cCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHH
Confidence            68999999999999999999886  6777664  3455555   44455555444332 44444444444

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=90.62  E-value=2.5  Score=37.89  Aligned_cols=43  Identities=16%  Similarity=0.192  Sum_probs=31.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK  122 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~  122 (369)
                      .|+|.|.|+||.||....+.+.+.  .++|++++  ++-+.+.+..+
T Consensus         5 ~~~vlItGa~g~iG~~~a~~l~~~--G~~V~~~~--r~~~~~~~~~~   47 (238)
T PRK05786          5 GKKVAIIGVSEGLGYAVAYFALKE--GAQVCINS--RNENKLKRMKK   47 (238)
T ss_pred             CcEEEEECCCchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHH
Confidence            368999999999999999998875  67888764  33455544433

>TIGR00639 PurN phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent

Probab=90.56  E-value=5.3  Score=37.06  Aligned_cols=116  Identities=21%  Similarity=0.133  Sum_probs=71.8

Q ss_pred             eeEEEEec-CChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCch-----h-HHHHHHHHhcCCC
Q 017567           77 KPISVLGS-TGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNES-----L-LDEIKEALANVEE  149 (369)
Q Consensus        77 kkI~ILGS-TGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~-----~-~~~l~~~l~~~~~  149 (369)
                      +||+||-| +||-....++-+++..-..+|+++.+++.-....+.++++.-.+..+..++     . -+++.+.+...+.
T Consensus         1 ~riail~sg~gs~~~~ll~~~~~~~l~~~I~~vi~~~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~~~~~~~l~~~~~   80 (190)
T TIGR00639         1 KRIVVLISGNGSNLQAIIDACKEGKIPASVVLVISNKPDAYGLERAAQAGIPTFVLSLKDFPSREAFDQAIIEELRAHEV   80 (190)
T ss_pred             CeEEEEEcCCChhHHHHHHHHHcCCCCceEEEEEECCccchHHHHHHHcCCCEEEECccccCchhhhhHHHHHHHHhcCC
Confidence            47888887 677777777777776656889988776544555688888887776543221     1 1234444444444


Q ss_pred             CceEEecHHHHH--HHhcCCCCCEEEEe----ccCccCcHHHHHHHHcCC
Q 017567          150 KPEILAGEQGVI--EAARHPDAVTVVTG----IVGCAGLKPTVAAIEAGK  193 (369)
Q Consensus       150 ~~~v~~G~~gl~--~~~~~~~~D~Vv~A----IvG~aGL~pt~~Ai~~gK  193 (369)
                      +.-|++|---+.  ++.+.+. --++|-    ..-+-|..|...|+.+|.
T Consensus        81 D~iv~~~~~~il~~~~l~~~~-~~~iNiHpslLP~yrG~~p~~~ai~~g~  129 (190)
T TIGR00639        81 DLVVLAGFMRILGPTFLSRFA-GRILNIHPSLLPAFPGLHAVEQALEAGV  129 (190)
T ss_pred             CEEEEeCcchhCCHHHHhhcc-CCEEEEeCCcccCCCCccHHHHHHHcCC
Confidence            555666653221  2333222 135554    344889999999999984

In phylogenetic analyses, the member from Saccharomyces cerevisiae shows a long branch length but membership in the family, while the formyltetrahydrofolate deformylases form a closely related outgroup.

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=90.55  E-value=2.6  Score=38.50  Aligned_cols=41  Identities=27%  Similarity=0.303  Sum_probs=30.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQV  121 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~  121 (369)
                      |++.|.|+||.||.+..+-+.++  .++|+.+.  +|.+.+.+..
T Consensus        13 k~ilItGa~g~IG~~la~~l~~~--G~~V~~~~--r~~~~~~~~~   53 (259)
T PRK08213         13 KTALVTGGSRGLGLQIAEALGEA--GARVVLSA--RKAEELEEAA   53 (259)
T ss_pred             CEEEEECCCchHHHHHHHHHHHc--CCEEEEEe--CCHHHHHHHH
Confidence            68999999999999999998875  45675543  4555554443

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=90.46  E-value=2.3  Score=38.36  Aligned_cols=40  Identities=25%  Similarity=0.162  Sum_probs=28.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLA  118 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~  118 (369)
                      .++|.|.|+||.||.+..+-+.+.  .++|+.+ ..++-+.+.
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~--g~~v~~~-~~~~~~~~~   45 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKE--GSLVVVN-AKKRAEEMN   45 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHC--CCEEEEE-eCCChHHHH
Confidence            368999999999999999988764  5676553 333434443

>PRK07576 short chain dehydrogenase; Provisional

Probab=90.43  E-value=2.7  Score=39.04  Aligned_cols=44  Identities=18%  Similarity=0.179  Sum_probs=32.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~  123 (369)
                      .|++.|.|+||.||....+-+.+.  ..+|+.+.  ++.+.+.+...+
T Consensus         9 ~k~ilItGasggIG~~la~~l~~~--G~~V~~~~--r~~~~~~~~~~~   52 (264)
T PRK07576          9 GKNVVVVGGTSGINLGIAQAFARA--GANVAVAS--RSQEKVDAAVAQ   52 (264)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHH
Confidence            368999999999999999988875  56676654  445555544433

>PRK08017 oxidoreductase; Provisional

Probab=90.34  E-value=1.6  Score=39.54  Aligned_cols=60  Identities=13%  Similarity=0.182  Sum_probs=38.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKE  142 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~  142 (369)
                      |+|.|.|+||.||.+..+.+.+.  .++|+++  .+|.+++.+ .++.+...+ ..|-.+.+.+++
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~--g~~v~~~--~r~~~~~~~-~~~~~~~~~-~~D~~~~~~~~~   62 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRR--GYRVLAA--CRKPDDVAR-MNSLGFTGI-LLDLDDPESVER   62 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHC--CCEEEEE--eCCHHHhHH-HHhCCCeEE-EeecCCHHHHHH
Confidence            57999999999999999999875  4677665  356666543 333443333 234444444444

>PRK08339 short chain dehydrogenase; Provisional

Probab=90.30  E-value=3.1  Score=38.74  Aligned_cols=44  Identities=20%  Similarity=0.156  Sum_probs=32.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~  123 (369)
                      .|.+.|.|+||.||..+.+-+.+.  .++|+.+  .+|.+.+.+...+
T Consensus         8 ~k~~lItGas~gIG~aia~~l~~~--G~~V~~~--~r~~~~~~~~~~~   51 (263)
T PRK08339          8 GKLAFTTASSKGIGFGVARVLARA--GADVILL--SRNEENLKKAREK   51 (263)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHH
Confidence            367999999999999999998876  5777654  3456655544443

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=90.29  E-value=2.6  Score=38.87  Aligned_cols=93  Identities=19%  Similarity=0.214  Sum_probs=60.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      ..+|.|.|++|++|..++.+.+..  .++|++++...  +. .+.++++..+.+....+.    +.+             
T Consensus       143 g~~vlV~ga~g~~g~~~~~~a~~~--g~~v~~~~~~~--~~-~~~~~~~g~~~~~~~~~~----~~~-------------  200 (320)
T cd08243         143 GDTLLIRGGTSSVGLAALKLAKAL--GATVTATTRSP--ER-AALLKELGADEVVIDDGA----IAE-------------  200 (320)
T ss_pred             CCEEEEEcCCChHHHHHHHHHHHc--CCEEEEEeCCH--HH-HHHHHhcCCcEEEecCcc----HHH-------------
Confidence            358999999999999999999987  57777765433  33 345567776665432111    111             


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCcee
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~ia  196 (369)
                         .+.++  ...+|.+++.+.| ..+...+..+..+-++.
T Consensus       201 ---~i~~~--~~~~d~vl~~~~~-~~~~~~~~~l~~~g~~v  235 (320)
T cd08243         201 ---QLRAA--PGGFDKVLELVGT-ATLKDSLRHLRPGGIVC  235 (320)
T ss_pred             ---HHHHh--CCCceEEEECCCh-HHHHHHHHHhccCCEEE
Confidence               12223  2358999987665 56777777777655443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=90.20  E-value=0.4  Score=45.20  Aligned_cols=33  Identities=21%  Similarity=0.356  Sum_probs=28.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      .|+|.|.|+||+||....+-+.+.  .++|+++.-
T Consensus         4 ~~~ilVtGatGfIG~~l~~~L~~~--g~~V~~~~r   36 (322)
T PLN02662          4 GKVVCVTGASGYIASWLVKLLLQR--GYTVKATVR   36 (322)
T ss_pred             CCEEEEECChHHHHHHHHHHHHHC--CCEEEEEEc
Confidence            368999999999999999988876  578888764

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=90.11  E-value=3  Score=39.92  Aligned_cols=94  Identities=15%  Similarity=0.084  Sum_probs=58.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh-hCCCEEEEcC-chhHHHHHHHHhcCCCCceEE
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR-FKPQVVAVRN-ESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~-FkP~~V~v~d-e~~~~~l~~~l~~~~~~~~v~  154 (369)
                      .+|.|.|++|.+|..++.+.+..  .++|++.+..  -++ .+.+++ +..+.+.-.+ +...   .+            
T Consensus       153 ~~VlI~Ga~G~vG~~aiqlAk~~--G~~Vi~~~~~--~~~-~~~~~~~lGa~~vi~~~~~~~~---~~------------  212 (338)
T cd08295         153 ETVFVSAASGAVGQLVGQLAKLK--GCYVVGSAGS--DEK-VDLLKNKLGFDDAFNYKEEPDL---DA------------  212 (338)
T ss_pred             CEEEEecCccHHHHHHHHHHHHc--CCEEEEEeCC--HHH-HHHHHHhcCCceeEEcCCcccH---HH------------
Confidence            58999999999999999999986  5677775532  233 334444 6666654322 1111   11            


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCcee
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~ia  196 (369)
                          .+.+... ..+|.|++.+.| ..+.-.+.+++.+-++.
T Consensus       213 ----~i~~~~~-~gvd~v~d~~g~-~~~~~~~~~l~~~G~iv  248 (338)
T cd08295         213 ----ALKRYFP-NGIDIYFDNVGG-KMLDAVLLNMNLHGRIA  248 (338)
T ss_pred             ----HHHHhCC-CCcEEEEECCCH-HHHHHHHHHhccCcEEE
Confidence                1122222 358999997655 56666777776665543

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PLN00016 RNA-binding protein; Provisional

Probab=90.10  E-value=1.2  Score=43.94  Aligned_cols=36  Identities=17%  Similarity=0.241  Sum_probs=30.2

Q ss_pred             CCeeEEEE----ecCChHhHHHHHHHHhCCCceEEEEEeecC
Q 017567           75 GPKPISVL----GSTGSIGTQTLDIVAEHEDKFRVVALAAGS  112 (369)
Q Consensus        75 ~~kkI~IL----GSTGSIGtqTLdVI~~~pd~F~VvaLaag~  112 (369)
                      .+++|.|+    |+||.||....+-+.+.  .++|++++-+.
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~--G~~V~~l~R~~   90 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKA--GHEVTLFTRGK   90 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHC--CCEEEEEecCC
Confidence            34789999    99999999999988765  68999988543

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=90.06  E-value=0.51  Score=39.31  Aligned_cols=33  Identities=48%  Similarity=0.846  Sum_probs=29.4

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (369)
                      ||+|+|+||-+|...++.+.++|+ |+++++...
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~~-~~l~av~~~   33 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPD-FEVVALAAS   33 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCCC-ceEEEEEec
Confidence            589999999999999999999876 999999553

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=90.03  E-value=0.39  Score=51.15  Aligned_cols=36  Identities=22%  Similarity=0.446  Sum_probs=30.3

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      .+|+|.|.|+||+||+..++-+.+....++|+++.-
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~   40 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDK   40 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeC
Confidence            457899999999999999998887644688998863

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=89.97  E-value=0.36  Score=45.13  Aligned_cols=32  Identities=13%  Similarity=0.253  Sum_probs=27.0

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (369)
                      +|.|+|+||.||...++-+.+.  .++|.+++-.
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~--g~~V~~~~R~   32 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAA--SVPFLVASRS   32 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhC--CCcEEEEeCC
Confidence            5899999999999999988764  6888888743

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=89.97  E-value=1  Score=43.34  Aligned_cols=32  Identities=19%  Similarity=0.285  Sum_probs=27.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      |+|.|.|+||+||....+-+.+.  .++|+++.-
T Consensus         7 ~~vlVTGatGfiG~~l~~~L~~~--G~~V~~~~r   38 (340)
T PLN02653          7 KVALITGITGQDGSYLTEFLLSK--GYEVHGIIR   38 (340)
T ss_pred             CEEEEECCCCccHHHHHHHHHHC--CCEEEEEec
Confidence            57999999999999999998875  578888754

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=89.95  E-value=1.6  Score=41.49  Aligned_cols=33  Identities=21%  Similarity=0.313  Sum_probs=28.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      .|+|.|.|+||+||....+-+.+.  .++|++++-
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r   37 (322)
T PLN02986          5 GKLVCVTGASGYIASWIVKLLLLR--GYTVKATVR   37 (322)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEEC
Confidence            468999999999999999988875  578887754

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=89.95  E-value=2.7  Score=42.98  Aligned_cols=31  Identities=26%  Similarity=0.261  Sum_probs=24.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      .|+|.|+|+ |-+|..+.+.+++.  .++|+..-
T Consensus        16 ~~~v~viG~-G~~G~~~A~~L~~~--G~~V~~~d   46 (480)
T PRK01438         16 GLRVVVAGL-GVSGFAAADALLEL--GARVTVVD   46 (480)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHC--CCEEEEEe
Confidence            468999997 88999999999875  56776643

>PRK08177 short chain dehydrogenase; Provisional

Probab=89.94  E-value=0.86  Score=40.97  Aligned_cols=33  Identities=18%  Similarity=0.370  Sum_probs=27.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      +|++.|.|+||.||....+-+.+.  .++|++++-
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~--G~~V~~~~r   33 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLER--GWQVTATVR   33 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhC--CCEEEEEeC
Confidence            478999999999999999888875  678887764

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=89.93  E-value=3.3  Score=40.50  Aligned_cols=96  Identities=13%  Similarity=0.096  Sum_probs=58.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      .+|.|.|++|.||..++.+.+..  ..+|++.+  ++-+++....+++..+.+.-..+.  ..+.+              
T Consensus       160 ~~VlV~GaaG~vG~~aiqlAk~~--G~~Vi~~~--~~~~k~~~~~~~lGa~~vi~~~~~--~~~~~--------------  219 (348)
T PLN03154        160 DSVFVSAASGAVGQLVGQLAKLH--GCYVVGSA--GSSQKVDLLKNKLGFDEAFNYKEE--PDLDA--------------  219 (348)
T ss_pred             CEEEEecCccHHHHHHHHHHHHc--CCEEEEEc--CCHHHHHHHHHhcCCCEEEECCCc--ccHHH--------------
Confidence            58999999999999999999986  46777654  333444322236777666543211  01111              


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCcee
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~ia  196 (369)
                        .+.++.. ..+|.|++++.| ..+...+.+++.|-++.
T Consensus       220 --~i~~~~~-~gvD~v~d~vG~-~~~~~~~~~l~~~G~iv  255 (348)
T PLN03154        220 --ALKRYFP-EGIDIYFDNVGG-DMLDAALLNMKIHGRIA  255 (348)
T ss_pred             --HHHHHCC-CCcEEEEECCCH-HHHHHHHHHhccCCEEE
Confidence              1122222 258899987654 45666677776665554

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=89.83  E-value=0.34  Score=44.56  Aligned_cols=30  Identities=27%  Similarity=0.367  Sum_probs=26.0

Q ss_pred             EEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           79 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        79 I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      |.|+|+||+||+...+.+.+.  .|+|++++-
T Consensus         1 vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r   30 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKD--GHEVTILTR   30 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHc--CCEEEEEeC
Confidence            579999999999999988764  589999873

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=89.74  E-value=2.1  Score=41.43  Aligned_cols=32  Identities=25%  Similarity=0.153  Sum_probs=28.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      |+|.|.|+||+||....+-+.+.  .++|++++-
T Consensus         5 k~ilItGatG~IG~~l~~~L~~~--G~~V~~~~r   36 (349)
T TIGR02622         5 KKVLVTGHTGFKGSWLSLWLLEL--GAEVYGYSL   36 (349)
T ss_pred             CEEEEECCCChhHHHHHHHHHHC--CCEEEEEeC
Confidence            67999999999999999999875  578988863

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=89.73  E-value=3.8  Score=36.65  Aligned_cols=43  Identities=23%  Similarity=0.241  Sum_probs=31.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQV  121 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~  121 (369)
                      +|++.|.|+||.||..+.+-+.+.  .++|+.+.-..+ +.+.+..
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~--g~~vi~~~r~~~-~~~~~~~   44 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLND--GYRVIATYFSGN-DCAKDWF   44 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCcH-HHHHHHH
Confidence            468999999999999999998876  578877754433 4444333

>PRK07831 short chain dehydrogenase; Provisional

Probab=89.69  E-value=4.2  Score=37.31  Aligned_cols=41  Identities=27%  Similarity=0.270  Sum_probs=29.6

Q ss_pred             CeeEEEEecCCh-HhHHHHHHHHhCCCceEEEEEeecCCHHHHHHH
Q 017567           76 PKPISVLGSTGS-IGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ  120 (369)
Q Consensus        76 ~kkI~ILGSTGS-IGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ  120 (369)
                      .|++.|.|+||| ||.....-+.+.  .++|+...  +|.+.+.+.
T Consensus        17 ~k~vlItG~sg~gIG~~ia~~l~~~--G~~V~~~~--~~~~~~~~~   58 (262)
T PRK07831         17 GKVVLVTAAAGTGIGSATARRALEE--GARVVISD--IHERRLGET   58 (262)
T ss_pred             CCEEEEECCCcccHHHHHHHHHHHc--CCEEEEEe--CCHHHHHHH
Confidence            478999999996 999999998876  45666533  455555443

>PRK07023 short chain dehydrogenase; Provisional

Probab=89.65  E-value=0.47  Score=42.97  Aligned_cols=34  Identities=15%  Similarity=0.225  Sum_probs=28.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (369)
                      ++++.|.|+||.||.+..+-+.+.  .++|+.++..
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~--G~~v~~~~r~   34 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQP--GIAVLGVARS   34 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhC--CCEEEEEecC
Confidence            357999999999999999998875  6788876543

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=89.63  E-value=4  Score=38.21  Aligned_cols=94  Identities=23%  Similarity=0.343  Sum_probs=59.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .++|.|.|++|++|..++.+.++.  .++|++.+..  -+++ +.++++..+.+.-.++..    .+             
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~--g~~v~~~~~~--~~~~-~~~~~~g~~~v~~~~~~~----~~-------------  204 (326)
T cd08289         147 QGPVLVTGATGGVGSLAVSILAKL--GYEVVASTGK--ADAA-DYLKKLGAKEVIPREELQ----EE-------------  204 (326)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHC--CCeEEEEecC--HHHH-HHHHHcCCCEEEcchhHH----HH-------------
Confidence            358999999999999999999987  5677765433  3333 444667765543222110    11             


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCcee
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~ia  196 (369)
                         .+.++ ....+|.|++.+.| ..+...+.+++.+-++.
T Consensus       205 ---~~~~~-~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~i  240 (326)
T cd08289         205 ---SIKPL-EKQRWAGAVDPVGG-KTLAYLLSTLQYGGSVA  240 (326)
T ss_pred             ---HHHhh-ccCCcCEEEECCcH-HHHHHHHHHhhcCCEEE
Confidence               11222 12358999998655 67777888887665543

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=89.62  E-value=3.8  Score=36.59  Aligned_cols=40  Identities=28%  Similarity=0.319  Sum_probs=30.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD  119 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~e  119 (369)
                      |.+.|.|+||.||..+.+-+.+.  .++|+++.. ++-+.+.+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~--G~~v~~~~r-~~~~~~~~   40 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKD--GYRVAANCG-PNEERAEA   40 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHC--CCEEEEEeC-CCHHHHHH
Confidence            57899999999999999999875  677877654 35555444

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06114 short chain dehydrogenase; Provisional

Probab=89.62  E-value=4.7  Score=36.95  Aligned_cols=49  Identities=14%  Similarity=0.133  Sum_probs=34.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC--CHHHHHHHHHhhCCC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS--NITLLADQVKRFKPQ  127 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~--Nv~lL~eQ~~~FkP~  127 (369)
                      |++.|.|+||.||..+.+-+.+.  .++|+.+.-..  ..+.+.++++....+
T Consensus         9 k~~lVtG~s~gIG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~l~~~~~~   59 (254)
T PRK06114          9 QVAFVTGAGSGIGQRIAIGLAQA--GADVALFDLRTDDGLAETAEHIEAAGRR   59 (254)
T ss_pred             CEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHHhcCCc
Confidence            68999999999999999998875  57888765332  234555555544333

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=89.61  E-value=3.3  Score=39.34  Aligned_cols=93  Identities=18%  Similarity=0.306  Sum_probs=59.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      ..+|.|+|++|++|..++.+.+..  ..+|++++ .++  + .+.++++...++...++....+                
T Consensus       178 g~~vlI~g~~g~ig~~~~~~a~~~--g~~vi~~~-~~~--~-~~~~~~~g~~~~~~~~~~~~~~----------------  235 (350)
T cd08274         178 GETVLVTGASGGVGSALVQLAKRR--GAIVIAVA-GAA--K-EEAVRALGADTVILRDAPLLAD----------------  235 (350)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhc--CCEEEEEe-Cch--h-hHHHHhcCCeEEEeCCCccHHH----------------
Confidence            358999999999999999999987  46677765 332  2 3455777765443222221111                


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCcee
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~ia  196 (369)
                           .+......+|.|++.+.| ..+...+.+++.+-++.
T Consensus       236 -----~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~G~~v  270 (350)
T cd08274         236 -----AKALGGEPVDVVADVVGG-PLFPDLLRLLRPGGRYV  270 (350)
T ss_pred             -----HHhhCCCCCcEEEecCCH-HHHHHHHHHhccCCEEE
Confidence                 111222358999988665 56777777777665543

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK08251 short chain dehydrogenase; Provisional

Probab=89.61  E-value=3.8  Score=36.99  Aligned_cols=40  Identities=15%  Similarity=0.182  Sum_probs=29.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ  120 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ  120 (369)
                      |++.|.|+||.||....+-+.+..  .+|+.++  +|.+.+.+.
T Consensus         3 k~vlItGas~giG~~la~~l~~~g--~~v~~~~--r~~~~~~~~   42 (248)
T PRK08251          3 QKILITGASSGLGAGMAREFAAKG--RDLALCA--RRTDRLEEL   42 (248)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcC--CEEEEEe--CCHHHHHHH
Confidence            679999999999999999998874  5665543  445544433

>PLN02214 cinnamoyl-CoA reductase

Probab=89.55  E-value=1.9  Score=42.12  Aligned_cols=33  Identities=24%  Similarity=0.368  Sum_probs=28.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      .|+|.|.|+||+||....+-+.+.  .++|++++-
T Consensus        10 ~~~vlVTGatGfIG~~l~~~L~~~--G~~V~~~~r   42 (342)
T PLN02214         10 GKTVCVTGAGGYIASWIVKILLER--GYTVKGTVR   42 (342)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeC
Confidence            458999999999999999988875  688988763

>PRK07062 short chain dehydrogenase; Provisional

Probab=89.52  E-value=3.1  Score=38.19  Aligned_cols=42  Identities=21%  Similarity=0.249  Sum_probs=30.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQV  121 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~  121 (369)
                      .|.+.|.|+||.||.....-+.+.  .++|+.++  +|.+.+.+..
T Consensus         8 ~k~~lItGas~giG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~   49 (265)
T PRK07062          8 GRVAVVTGGSSGIGLATVELLLEA--GASVAICG--RDEERLASAE   49 (265)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEe--CCHHHHHHHH
Confidence            368999999999999999888875  56776543  4555554433

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=89.50  E-value=3.7  Score=37.55  Aligned_cols=32  Identities=22%  Similarity=0.147  Sum_probs=26.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      .|+|.|.|+||.||....+.+.++  .++|+.+.
T Consensus        11 ~k~vlVtG~s~gIG~~la~~l~~~--G~~vv~~~   42 (255)
T PRK06113         11 GKCAIITGAGAGIGKEIAITFATA--GASVVVSD   42 (255)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCeEEEEe
Confidence            478999999999999999999886  56776543

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=89.43  E-value=1.4  Score=39.90  Aligned_cols=32  Identities=28%  Similarity=0.328  Sum_probs=27.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      .|++.|.|+||.||.....-+.+.  .++|+++.
T Consensus        12 ~k~vlItG~~g~iG~~la~~l~~~--G~~Vi~~~   43 (247)
T PRK08945         12 DRIILVTGAGDGIGREAALTYARH--GATVILLG   43 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCcEEEEe
Confidence            468999999999999999999875  57887765

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=89.41  E-value=2  Score=41.69  Aligned_cols=32  Identities=25%  Similarity=0.384  Sum_probs=27.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      .++|.|.|+||+||....+-+.+.  .++|+++.
T Consensus        10 ~~~vLVtG~~GfIG~~l~~~L~~~--G~~V~~~~   41 (353)
T PLN02896         10 TGTYCVTGATGYIGSWLVKLLLQR--GYTVHATL   41 (353)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe
Confidence            357999999999999999998875  57898864

>PF00551 Formyl_trans_N: Formyl transferase; InterPro: IPR002376 A number of formyl transferases belong to this group

Probab=89.32  E-value=1.3  Score=40.13  Aligned_cols=55  Identities=13%  Similarity=0.130  Sum_probs=41.9

Q ss_pred             eeEEEEec-CChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE
Q 017567           77 KPISVLGS-TGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV  131 (369)
Q Consensus        77 kkI~ILGS-TGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v  131 (369)
                      +||+++|| +||.+...|+-+++....++++++..++.-..-..-+.+..+....+
T Consensus         1 mrI~~~~Sg~~~~~~~~l~~l~~~~~~~~iv~Vit~~~~~~~~~~~~~~~~~~~~~   56 (181)
T PF00551_consen    1 MRIVFFGSGSGSFLKALLEALKARGHNVEIVLVITNPDKPRGRSRAIKNGIPAQVA   56 (181)
T ss_dssp             EEEEEEESSSSHHHHHHHHHHHTTSSEEEEEEEEESSTTTHHHHHHHHTTHHEEEH
T ss_pred             CEEEEEEcCCCHHHHHHHHHHHhCCCCceEEEEeccccccccccccccCCCCEEec
Confidence            58999975 56889999999998888899999998876655556666666655443

Methionyl-tRNA formyltransferase transfers a formyl group onto the amino terminus of the acyl moiety of the methionyl aminoacyl-tRNA. The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and by impairing its binding to EFTU-GTP. Formyltetrahydrofolate dehydrogenase produces formate from formyl- tetrahydrofolate. This is the N-terminal domain of these enzymes and is found upstream of the C-terminal domain (IPR005793 from INTERPRO). The trifunctional glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide synthetase-glycinamide ribonucleotide transformylase catalyses the second, third and fifth steps in de novo purine biosynthesis. The glycinamide ribonucleotide transformylase belongs to this group.; GO: 0016742 hydroxymethyl-, formyl- and related transferase activity, 0009058 biosynthetic process; PDB: 3P9X_B 3OBI_A 3R8X_A 3KCQ_C 3RFO_D 3AV3_A 3N0V_D 3LOU_A 3O1L_A 4DS3_A ....

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=89.12  E-value=0.52  Score=48.39  Aligned_cols=33  Identities=21%  Similarity=0.322  Sum_probs=28.3

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      .++||.|.|+||+||...++-+.+.  .++|+++.
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~--G~~V~~ld  151 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGR--GDEVIVID  151 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEe
Confidence            3468999999999999999988775  68899875

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=89.01  E-value=0.89  Score=46.45  Aligned_cols=50  Identities=18%  Similarity=0.412  Sum_probs=34.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVV  129 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V  129 (369)
                      +.||+|.|+||..|.+-+..+.+||+ +++...+- +.  .--+-.++..|...
T Consensus         2 ~~kV~IvGasGYtG~EL~rlL~~Hp~-ve~~~~ss-~~--~~g~~~~~~~p~l~   51 (349)
T COG0002           2 MIKVGIVGASGYTGLELLRLLAGHPD-VELILISS-RE--RAGKPVSDVHPNLR   51 (349)
T ss_pred             CceEEEEcCCCCcHHHHHHHHhcCCC-eEEEEeec-hh--hcCCchHHhCcccc
Confidence            56899999999999999999999998 66443332 22  11222445566554

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=88.97  E-value=6.8  Score=37.15  Aligned_cols=96  Identities=17%  Similarity=0.206  Sum_probs=60.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .++|.|+|+ |++|..++.+.++... .+|++.+..  -+++ +.+++|..+.+.-.++...                  
T Consensus       168 ~~~vlI~g~-~~vg~~~~~~a~~~g~-~~v~~~~~~--~~~~-~~~~~~g~~~~~~~~~~~~------------------  224 (340)
T cd05284         168 GSTVVVIGV-GGLGHIAVQILRALTP-ATVIAVDRS--EEAL-KLAERLGADHVLNASDDVV------------------  224 (340)
T ss_pred             CCEEEEEcC-cHHHHHHHHHHHHhCC-CcEEEEeCC--HHHH-HHHHHhCCcEEEcCCccHH------------------
Confidence            468999994 5599999999998632 667776533  3343 3346777655543322211                  


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCcee
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~ia  196 (369)
                        +.+.++.....+|+|++.+.|-..+...+.++..+-++.
T Consensus       225 --~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i  263 (340)
T cd05284         225 --EEVRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYV  263 (340)
T ss_pred             --HHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEE
Confidence              223334433468999998776567777888887665544

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>PRK05884 short chain dehydrogenase; Provisional

Probab=88.89  E-value=2.9  Score=38.08  Aligned_cols=60  Identities=15%  Similarity=0.218  Sum_probs=40.5

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHH
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKE  142 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~  142 (369)
                      |+.|.|+||.||......+.+.  .++|+.+  .+|.+.+.+.+++.+...+ ..|-...+.+++
T Consensus         2 ~vlItGas~giG~~ia~~l~~~--g~~v~~~--~r~~~~~~~~~~~~~~~~~-~~D~~~~~~v~~   61 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRND--GHKVTLV--GARRDDLEVAAKELDVDAI-VCDNTDPASLEE   61 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHhccCcEE-ecCCCCHHHHHH
Confidence            6999999999999999988765  4677765  3567777766666554433 234443444443

>PRK06179 short chain dehydrogenase; Provisional

Probab=88.86  E-value=3  Score=38.38  Aligned_cols=38  Identities=26%  Similarity=0.331  Sum_probs=29.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLL  117 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL  117 (369)
                      .++|.|.|+||.||....+-+.+.  .++|++++  +|.+.+
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~--g~~V~~~~--r~~~~~   41 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARA--GYRVFGTS--RNPARA   41 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEe--CChhhc
Confidence            467999999999999999888875  67887765  344443

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=88.83  E-value=4.6  Score=36.21  Aligned_cols=43  Identities=19%  Similarity=0.303  Sum_probs=31.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~  123 (369)
                      +++.|.|++|.||..+.+.+.+.  .++|+.+.  ++.+++.+..++
T Consensus         6 ~~~lItG~~g~iG~~~a~~l~~~--G~~vi~~~--r~~~~~~~~~~~   48 (253)
T PRK08217          6 KVIVITGGAQGLGRAMAEYLAQK--GAKLALID--LNQEKLEEAVAE   48 (253)
T ss_pred             CEEEEECCCchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHH
Confidence            57999999999999999998886  46766543  444555444443

>PRK05876 short chain dehydrogenase; Provisional

Probab=88.82  E-value=4.3  Score=38.25  Aligned_cols=45  Identities=22%  Similarity=0.181  Sum_probs=33.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      .|.+.|.|+||.||....+-+.+.  .++|+..  .+|.+.+.+...++
T Consensus         6 ~k~vlVTGas~gIG~ala~~La~~--G~~Vv~~--~r~~~~l~~~~~~l   50 (275)
T PRK05876          6 GRGAVITGGASGIGLATGTEFARR--GARVVLG--DVDKPGLRQAVNHL   50 (275)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHH
Confidence            367999999999999999988876  5676653  35566666555544

>COG2201 CheB Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain [Cell motility and secretion / Signal transduction mechanisms]

Probab=88.78  E-value=5.2  Score=41.02  Aligned_cols=107  Identities=22%  Similarity=0.276  Sum_probs=81.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      .+|.|+.-++++=+---+++...|+ .+|++.+  .|-....+++++++|+.+.+..|-                -+.-|
T Consensus         2 irVlvVddsal~R~~i~~~l~~~~~-i~vv~~a--~ng~~a~~~~~~~~PDVi~ld~em----------------p~mdg   62 (350)
T COG2201           2 IRVLVVDDSALMRKVISDILNSDPD-IEVVGTA--RNGREAIDKVKKLKPDVITLDVEM----------------PVMDG   62 (350)
T ss_pred             cEEEEEcCcHHHHHHHHHHHhcCCC-eEEEEec--CCHHHHHHHHHhcCCCEEEEeccc----------------ccccH
Confidence            4789999999998888899998876 6788776  567888999999999999985431                13345


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccce
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL  203 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsL  203 (369)
                      -+.+.++.+....-+|+..-..--|-.-|++|++.|.-=.++ |++.
T Consensus        63 l~~l~~im~~~p~pVimvsslt~~g~~~t~~al~~gAvD~i~-kp~~  108 (350)
T COG2201          63 LEALRKIMRLRPLPVIMVSSLTEEGAEATLEALELGAVDFIA-KPSG  108 (350)
T ss_pred             HHHHHHHhcCCCCcEEEEeccccccHHHHHHHHhcCcceeec-CCCc
Confidence            666777666666667777778888899999999999444444 4443

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=88.76  E-value=0.51  Score=48.28  Aligned_cols=33  Identities=24%  Similarity=0.445  Sum_probs=26.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceE---EEEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFR---VVALA  109 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~---VvaLa  109 (369)
                      |.+|+|+||||.+|...++.+.+||+ |.   ++.++
T Consensus         1 m~~VAIVGATG~vG~ell~llL~~~~-f~~~~l~~~s   36 (369)
T PRK06598          1 MKKVGFVGWRGMVGSVLMQRMVEEND-FDLIEPVFFS   36 (369)
T ss_pred             CeEEEEEeCCCHHHHHHHHHHHhCCC-CCcCcEEEec
Confidence            35899999999999999996666765 77   66644

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=88.72  E-value=6  Score=32.57  Aligned_cols=23  Identities=22%  Similarity=0.354  Sum_probs=20.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEH   99 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~   99 (369)
                      |++.|.|+||+||....+.+.++
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~   23 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAER   23 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHh
Confidence            47899999999999999999875

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK14982 acyl-ACP reductase; Provisional

Probab=88.66  E-value=0.95  Score=45.84  Aligned_cols=46  Identities=15%  Similarity=0.289  Sum_probs=32.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      |+|.|+|+|||||....+-+.+...-.+|+.+  +++.+.+.+...++
T Consensus       156 k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv--~R~~~rl~~La~el  201 (340)
T PRK14982        156 ATVAVVGATGDIGSAVCRWLDAKTGVAELLLV--ARQQERLQELQAEL  201 (340)
T ss_pred             CEEEEEccChHHHHHHHHHHHhhCCCCEEEEE--cCCHHHHHHHHHHh
Confidence            68999999999999999999743111233332  46677777666655

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=88.64  E-value=4.4  Score=37.57  Aligned_cols=44  Identities=20%  Similarity=0.190  Sum_probs=31.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~  123 (369)
                      .|++.|.|+||.||.....-+.+.  .++|+.+.  +|.+.+.+..++
T Consensus        10 ~k~vlVtGas~giG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~   53 (278)
T PRK08277         10 GKVAVITGGGGVLGGAMAKELARA--GAKVAILD--RNQEKAEAVVAE   53 (278)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHH
Confidence            368999999999999999998875  56776543  344444443333

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=88.64  E-value=6.4  Score=37.47  Aligned_cols=30  Identities=30%  Similarity=0.408  Sum_probs=25.9

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      +|.|.|+||.||....+-+.+.  .++|+++.
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~   31 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQN--GHDVVILD   31 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHC--CCeEEEEe
Confidence            6999999999999999988765  57888874

>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial

Probab=88.52  E-value=0.44  Score=48.79  Aligned_cols=25  Identities=24%  Similarity=0.506  Sum_probs=22.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHED  101 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd  101 (369)
                      ++|+|+||||-+|+..++++.++|+
T Consensus         1 ~~VavvGATG~VG~~ll~~L~~e~~   25 (366)
T TIGR01745         1 KNVGLVGWRGMVGSVLMQRMQEERD   25 (366)
T ss_pred             CeEEEEcCcCHHHHHHHHHHHhCCC
Confidence            4799999999999999999995544

>PRK13535 erythrose 4-phosphate dehydrogenase; Provisional

Probab=88.50  E-value=3.8  Score=41.51  Aligned_cols=112  Identities=19%  Similarity=0.186  Sum_probs=67.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHh--CCCceEEEEEeecCCHHHHHHHHHhhCC-----CEEEEcCchhHHHHHHHHhcCCC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAE--HEDKFRVVALAAGSNITLLADQVKRFKP-----QVVAVRNESLLDEIKEALANVEE  149 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~--~pd~F~VvaLaag~Nv~lL~eQ~~~FkP-----~~V~v~de~~~~~l~~~l~~~~~  149 (369)
                      .||+|.|. |=||+..++++.+  +|++++|+|+---...+.|+-+.+-=..     .-|...+..        +.-.+.
T Consensus         2 ~~IaInGf-GrIGR~~lr~l~e~~~~~~l~vvaind~~~~~~~ayll~ydS~hg~~~~~v~~~~~~--------l~v~g~   72 (336)
T PRK13535          2 IRVAINGF-GRIGRNVLRALYESGRRAEITVVAINELADAEGMAHLLKYDTSHGRFAWDVRQERDQ--------LFVGDD   72 (336)
T ss_pred             eEEEEECc-CHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHhhhccCCCCCCCcEEecCCE--------EEECCE
Confidence            47999999 9999999999876  4688999988655567777665542111     111111110        110112


Q ss_pred             CceEEecHHHHHHHh-cCCCCCEEEEeccCccCcHHHHHHHHcC-Cceeee
Q 017567          150 KPEILAGEQGVIEAA-RHPDAVTVVTGIVGCAGLKPTVAAIEAG-KDIALA  198 (369)
Q Consensus       150 ~~~v~~G~~gl~~~~-~~~~~D~Vv~AIvG~aGL~pt~~Ai~~g-K~iaLA  198 (369)
                      .++++.. ....++- ...++|+|+.+--++.--+-.-.++++| |+|-+.
T Consensus        73 ~i~v~~~-~~p~~~~w~~~gvDiVle~tG~~~s~~~a~~~l~aGAk~V~iS  122 (336)
T PRK13535         73 AIRLLHE-RDIASLPWRELGVDVVLDCTGVYGSREDGEAHIAAGAKKVLFS  122 (336)
T ss_pred             EEEEEEc-CCcccCcccccCCCEEEEccchhhhHHHHHHHHHcCCEEEEec
Confidence            2334322 2222221 1247999999977777777777889999 444443

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=88.48  E-value=4.6  Score=35.84  Aligned_cols=31  Identities=19%  Similarity=0.187  Sum_probs=25.7

Q ss_pred             EEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 017567           79 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (369)
Q Consensus        79 I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (369)
                      |.|.|+||.||....+.+.+.  .++|+.++..
T Consensus         1 vlItG~~g~iG~~la~~l~~~--G~~v~~~~r~   31 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKE--GAKVIITYRS   31 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHC--CCEEEEEeCC
Confidence            479999999999999998875  5788777654

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=88.46  E-value=4.7  Score=38.92  Aligned_cols=97  Identities=14%  Similarity=0.138  Sum_probs=58.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      .++|.|.| +|.+|..++.+.+..  .. +|++++  ++-+++ ++++++..+.+.-.++.....+.             
T Consensus       178 g~~vlI~g-~g~vG~~~~~lak~~--G~~~v~~~~--~~~~~~-~~~~~~g~~~vi~~~~~~~~~~~-------------  238 (361)
T cd08231         178 GDTVVVQG-AGPLGLYAVAAAKLA--GARRVIVID--GSPERL-ELAREFGADATIDIDELPDPQRR-------------  238 (361)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHc--CCCeEEEEc--CCHHHH-HHHHHcCCCeEEcCcccccHHHH-------------
Confidence            35799998 599999999999986  35 566654  333443 45567766554432221111111             


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCc
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~  194 (369)
                         +.+.++.....+|+|++.+-|...+...+..++.+-+
T Consensus       239 ---~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~  275 (361)
T cd08231         239 ---AIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGT  275 (361)
T ss_pred             ---HHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCE
Confidence               1334444444689999986555567777777765433

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>PLN02206 UDP-glucuronate decarboxylase

Probab=88.41  E-value=0.62  Score=47.94  Aligned_cols=32  Identities=19%  Similarity=0.316  Sum_probs=27.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      .+||.|.|+||+||...++-+.+.  .++|+++.
T Consensus       119 ~~kILVTGatGfIGs~Lv~~Ll~~--G~~V~~ld  150 (442)
T PLN02206        119 GLRVVVTGGAGFVGSHLVDRLMAR--GDSVIVVD  150 (442)
T ss_pred             CCEEEEECcccHHHHHHHHHHHHC--cCEEEEEe
Confidence            368999999999999999988875  67898874

>PRK07985 oxidoreductase; Provisional

Probab=88.40  E-value=3.3  Score=39.52  Aligned_cols=64  Identities=13%  Similarity=0.007  Sum_probs=39.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC---CHHHHHHHHHhhCCCEE-EEcCchhHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS---NITLLADQVKRFKPQVV-AVRNESLLDEIKE  142 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~---Nv~lL~eQ~~~FkP~~V-~v~de~~~~~l~~  142 (369)
                      |++.|.|+||.||.++.+-+.+.  .++|+.+.-..   +.+.+.+..++...+.. ...|-.+.+.+.+
T Consensus        50 k~vlITGas~gIG~aia~~L~~~--G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~  117 (294)
T PRK07985         50 RKALVTGGDSGIGRAAAIAYARE--GADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARS  117 (294)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHC--CCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHH
Confidence            68999999999999999999876  67777643222   33445555544433332 2344444444443

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=88.38  E-value=1.9  Score=44.60  Aligned_cols=83  Identities=24%  Similarity=0.342  Sum_probs=51.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCH-HHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNI-TLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv-~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      ++|.+-|+||++|.--+.=.-..++ .+|++|+=.+|- .-++...+.|.          .|..+++...   ..++++.
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~-~kv~cLVRA~s~E~a~~RL~~~~~----------~~~~~~e~~~---~ri~vv~   66 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSD-AKVICLVRAQSDEAALARLEKTFD----------LYRHWDELSA---DRVEVVA   66 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCC-CcEEEEEecCCHHHHHHHHHHHhh----------hhhhhhhhhc---ceEEEEe
Confidence            4789999999999766554444455 999999977772 23333344443          2333444322   3467777


Q ss_pred             cHHH----------HHHHhcCCCCCEEEEe
Q 017567          156 GEQG----------VIEAARHPDAVTVVTG  175 (369)
Q Consensus       156 G~~g----------l~~~~~~~~~D~Vv~A  175 (369)
                      |+-+          -.++++  .+|.|+-.
T Consensus        67 gDl~e~~lGL~~~~~~~La~--~vD~I~H~   94 (382)
T COG3320          67 GDLAEPDLGLSERTWQELAE--NVDLIIHN   94 (382)
T ss_pred             cccccccCCCCHHHHHHHhh--hcceEEec
Confidence            7643          344554  48888864

>PRK06484 short chain dehydrogenase; Validated

Probab=88.31  E-value=4.2  Score=41.51  Aligned_cols=63  Identities=22%  Similarity=0.286  Sum_probs=43.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKE  142 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~  142 (369)
                      .|.+.|.|+|+-||..+.+-+.+.  .++|+.+  .++.+.+.++.++...+...+ .|-.+.+.+++
T Consensus         5 ~k~~lITGas~gIG~aia~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   68 (520)
T PRK06484          5 SRVVLVTGAAGGIGRAACQRFARA--GDQVVVA--DRNVERARERADSLGPDHHALAMDVSDEAQIRE   68 (520)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHhCCceeEEEeccCCHHHHHH
Confidence            368999999999999999998876  5677654  356788877777765444332 34333334443

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=88.29  E-value=4.2  Score=37.71  Aligned_cols=65  Identities=22%  Similarity=0.207  Sum_probs=39.7

Q ss_pred             CeeEEEEec--CChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCE-EEEcCchhHHHHHH
Q 017567           76 PKPISVLGS--TGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQV-VAVRNESLLDEIKE  142 (369)
Q Consensus        76 ~kkI~ILGS--TGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~-V~v~de~~~~~l~~  142 (369)
                      .|.++|.|+  ++-||..+-+-+.+.  .++|+...-+.|.+++.+.+.++..+. +...|-.+.+.+++
T Consensus         7 ~k~~lItGa~~s~GIG~a~a~~la~~--G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~   74 (256)
T PRK07889          7 GKRILVTGVITDSSIAFHVARVAQEQ--GAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLAS   74 (256)
T ss_pred             CCEEEEeCCCCcchHHHHHHHHHHHC--CCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHH
Confidence            368999999  899999999888875  566665443444555555555553322 22244444444443

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=88.29  E-value=2.1  Score=43.58  Aligned_cols=52  Identities=33%  Similarity=0.409  Sum_probs=38.5

Q ss_pred             eeEEEEecCChHhHHHHHHH-HhCCCceEEE---EEeecCCHHHHHHHHHhhCCCEEEE
Q 017567           77 KPISVLGSTGSIGTQTLDIV-AEHEDKFRVV---ALAAGSNITLLADQVKRFKPQVVAV  131 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI-~~~pd~F~Vv---aLaag~Nv~lL~eQ~~~FkP~~V~v  131 (369)
                      +++.|.|..|+||.+-+.-+ +++|| ++|+   .|+...|.+-|.....  .|++.++
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d-~~v~~~DkLTYAgn~~~l~~~~~--~~~~~fv   56 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPD-DHVVNLDKLTYAGNLENLADVED--SPRYRFV   56 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCC-ceEEEEecccccCCHHHHHhhhc--CCCceEE
Confidence            47999999999999988765 45676 6555   4577889999976655  4555554

>PRK05855 short chain dehydrogenase; Validated

Probab=88.25  E-value=3.8  Score=41.49  Aligned_cols=43  Identities=23%  Similarity=0.180  Sum_probs=31.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~  123 (369)
                      +++.|.|+||.||.++.+-+.+.  .++|+.++  +|.+.+.+..++
T Consensus       316 ~~~lv~G~s~giG~~~a~~l~~~--G~~v~~~~--r~~~~~~~~~~~  358 (582)
T PRK05855        316 KLVVVTGAGSGIGRETALAFARE--GAEVVASD--IDEAAAERTAEL  358 (582)
T ss_pred             CEEEEECCcCHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHH
Confidence            57999999999999999998875  56766543  455655554443

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=88.18  E-value=7.4  Score=36.29  Aligned_cols=89  Identities=17%  Similarity=0.287  Sum_probs=54.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      ..++.|.|+||++|..+..+.++.  .++|++++  ++-+.+ +.++++....+.-. +.    +.+.+           
T Consensus       163 ~~~vlI~ga~g~vG~~~~~~a~~~--g~~v~~~~--~~~~~~-~~~~~~~~~~~~~~-~~----~~~~~-----------  221 (332)
T cd08259         163 GDTVLVTGAGGGVGIHAIQLAKAL--GARVIAVT--RSPEKL-KILKELGADYVIDG-SK----FSEDV-----------  221 (332)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHc--CCeEEEEe--CCHHHH-HHHHHcCCcEEEec-HH----HHHHH-----------
Confidence            358999999999999999999987  56777665  333433 44455554443311 11    22211           


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCc
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~  194 (369)
                           .+.   .++|.|++.+ |...+...+.++..+-+
T Consensus       222 -----~~~---~~~d~v~~~~-g~~~~~~~~~~~~~~g~  251 (332)
T cd08259         222 -----KKL---GGADVVIELV-GSPTIEESLRSLNKGGR  251 (332)
T ss_pred             -----Hhc---cCCCEEEECC-ChHHHHHHHHHhhcCCE
Confidence                 111   1589999875 44457777777765543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>TIGR01546 GAPDH-II_archae glyceraldehyde-3-phosphate dehydrogenase, type II

Probab=88.17  E-value=3.6  Score=41.66  Aligned_cols=100  Identities=25%  Similarity=0.339  Sum_probs=65.6

Q ss_pred             EEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEecHH
Q 017567           79 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQ  158 (369)
Q Consensus        79 I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G~~  158 (369)
                      |+|.|. |.||+..++.+.++ ++++|+|+.- .+.+.++..+++++-+.+. ..+....++.+      .++.+ .|. 
T Consensus         1 VaInG~-GrIGr~varav~~~-~d~elVaVnD-~~~~~~a~lA~~lgyds~~-~~~~~~~~~~~------~~l~v-~g~-   68 (333)
T TIGR01546         1 VGVNGY-GTIGKRVADAVTKQ-DDMKLVGVTK-TSPDFEAYRAKELGIPVYA-ASEEFIPRFEE------AGIEV-AGT-   68 (333)
T ss_pred             CEEECC-cHHHHHHHHHHhhC-CCcEEEEEec-CChHHHHHHHHHhCCCEEe-ecCCcceEecc------CceEe-cCC-
Confidence            567776 99999999999887 5699999986 7788777888888755554 22111001111      11222 232 


Q ss_pred             HHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCC
Q 017567          159 GVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGK  193 (369)
Q Consensus       159 gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK  193 (369)
                       +.++.  .++|+|+.+-..+.++.=--.-++.|+
T Consensus        69 -~eeLl--~~vDiVve~Tp~~~~~~na~~~~~~Ga  100 (333)
T TIGR01546        69 -LEDLL--EKVDIVVDATPGGIGAKNKPLYEKAGV  100 (333)
T ss_pred             -HHHHh--hcCCEEEECCCCCCChhhHHHHHhCCc
Confidence             56665  359999999877877765555556663

All of the members of the seed are characterized. See, for instance. This model is very solid, there are no species falling between trusted and noise at this time. The closest relatives scoring in the noise are the class I GAPDH's.

>PRK07677 short chain dehydrogenase; Provisional

Probab=88.14  E-value=5.2  Score=36.49  Aligned_cols=41  Identities=20%  Similarity=0.233  Sum_probs=30.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQV  121 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~  121 (369)
                      |++.|.|+||.||......+.+.  ..+|+.+.  +|.+.+.+..
T Consensus         2 k~~lItG~s~giG~~ia~~l~~~--G~~Vi~~~--r~~~~~~~~~   42 (252)
T PRK07677          2 KVVIITGGSSGMGKAMAKRFAEE--GANVVITG--RTKEKLEEAK   42 (252)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHH
Confidence            67999999999999999999876  45676653  3444444433

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=88.12  E-value=9.2  Score=36.64  Aligned_cols=29  Identities=21%  Similarity=0.214  Sum_probs=23.6

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      +|+|+| +|.||.+...-+++.  .++|.+..
T Consensus         2 ~I~IIG-~G~mG~sla~~L~~~--g~~V~~~d   30 (279)
T PRK07417          2 KIGIVG-LGLIGGSLGLDLRSL--GHTVYGVS   30 (279)
T ss_pred             eEEEEe-ecHHHHHHHHHHHHC--CCEEEEEE
Confidence            699999 799999998888876  46776654

>KOG4777 consensus Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=88.09  E-value=0.4  Score=47.88  Aligned_cols=33  Identities=33%  Similarity=0.665  Sum_probs=27.9

Q ss_pred             eeEE-EEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           77 KPIS-VLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        77 kkI~-ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      |+++ |||+||++|+--+.++..||. |++--|.|
T Consensus         4 kk~a~vlGaTGaVGQrFi~lLsdhP~-f~ikvLgA   37 (361)
T KOG4777|consen    4 KKSAPVLGATGAVGQRFISLLSDHPY-FSIKVLGA   37 (361)
T ss_pred             ccccceeeccchhHHHHHHHhccCCc-ceeeeecc
Confidence            4555 999999999999999999986 88877733

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=88.09  E-value=4.3  Score=38.18  Aligned_cols=92  Identities=14%  Similarity=0.137  Sum_probs=58.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceE-EEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFR-VVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~-VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      ++|.|.|+ |.||..++.+.+..  .++ |++.  ..+-+++ +.++++..+.+.-.+ ..    .              
T Consensus       122 ~~VlV~G~-G~vG~~~~~~ak~~--G~~~Vi~~--~~~~~r~-~~a~~~Ga~~~i~~~-~~----~--------------  176 (280)
T TIGR03366       122 RRVLVVGA-GMLGLTAAAAAAAA--GAARVVAA--DPSPDRR-ELALSFGATALAEPE-VL----A--------------  176 (280)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHc--CCCEEEEE--CCCHHHH-HHHHHcCCcEecCch-hh----H--------------
Confidence            47999986 99999999999876  455 5554  3444554 567888876544211 11    1              


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCce
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~i  195 (369)
                        +.+.++.....+|+|+++..+-..+.-.+.+++.+-++
T Consensus       177 --~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~i  214 (280)
T TIGR03366       177 --ERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTA  214 (280)
T ss_pred             --HHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEE
Confidence              11122222335899999876666677777777766544

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PLN02650 dihydroflavonol-4-reductase

Probab=88.02  E-value=0.71  Score=44.65  Aligned_cols=33  Identities=24%  Similarity=0.346  Sum_probs=28.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      .|+|.|.|+||+||....+-+.+.  .++|+++.-
T Consensus         5 ~k~iLVTGatGfIGs~l~~~L~~~--G~~V~~~~r   37 (351)
T PLN02650          5 KETVCVTGASGFIGSWLVMRLLER--GYTVRATVR   37 (351)
T ss_pred             CCEEEEeCCcHHHHHHHHHHHHHC--CCEEEEEEc
Confidence            468999999999999999988875  678888764

>PRK06484 short chain dehydrogenase; Validated

Probab=87.96  E-value=7.4  Score=39.74  Aligned_cols=64  Identities=13%  Similarity=0.202  Sum_probs=44.0

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHH
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKE  142 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~  142 (369)
                      ..|.+.|.|+||-||..+.+-+.+.  .++|+.+  .+|.+.+.+...+...+...+ .|-.+.+.+++
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  332 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAA--GDRLLII--DRDAEGAKKLAEALGDEHLSVQADITDEAAVES  332 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHhCCceeEEEccCCCHHHHHH
Confidence            3478999999999999999888876  4677765  356777777776665554332 44444444444

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=87.88  E-value=6.4  Score=42.86  Aligned_cols=157  Identities=17%  Similarity=0.191  Sum_probs=99.7

Q ss_pred             CCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe---------------ecCCHHHHHHHHHhhCCCEEEEcCchh-
Q 017567           73 WDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA---------------AGSNITLLADQVKRFKPQVVAVRNESL-  136 (369)
Q Consensus        73 ~~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa---------------ag~Nv~lL~eQ~~~FkP~~V~v~de~~-  136 (369)
                      .++.+++.|+|| |+.|.+-++-.+++|+ |++||..               ...-.+ +.++++++..+.+.++-++. 
T Consensus       113 ~~~~~r~lIiGA-G~ag~~l~r~~~~~~~-~~pV~fiDdd~~~~g~~i~Gv~V~g~~~-i~~~v~~~~~~~iiiAips~~  189 (588)
T COG1086         113 KDNRIRLLIIGA-GSAGDLLLRALRRDPE-YTPVAFLDDDPDLTGMKIRGVPVLGRIE-IERVVEELGIQLILIAIPSAS  189 (588)
T ss_pred             ccCCCceEEEcC-chHHHHHHHHHHhCCC-cceEEEECCChhhcCCEEeceeeechhH-HHHHHHHcCCceEEEecCCCC
Confidence            345578999998 7889999999999988 8887753               334456 89999999999888765443 


Q ss_pred             ---HHHHHHHHhcCCCCceEEecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeecc------
Q 017567          137 ---LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG------  207 (369)
Q Consensus       137 ---~~~l~~~l~~~~~~~~v~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~aG------  207 (369)
                         .+++-+.+...+..++++..-+.+.+.... ==|+-+.=+=|=.=..|-.+.+.+    .+-||-.||.||      
T Consensus       190 ~~~~~~i~~~l~~~~~~v~~lP~~~~l~~~~~~-lreI~ieDLLgR~pV~~d~~~i~~----~~~gK~vLVTGagGSiGs  264 (588)
T COG1086         190 QEERRRILLRLARTGIAVRILPQLTDLKDLNGQ-LREIEIEDLLGRPPVALDTELIGA----MLTGKTVLVTGGGGSIGS  264 (588)
T ss_pred             HHHHHHHHHHHHhcCCcEEecCcHHHHHHhccc-cccCCHHHHhCCCCCCCCHHHHHh----HcCCCEEEEeCCCCcHHH
Confidence               233333444444556677665554442111 112222222222222333333332    355677788876      


Q ss_pred             cchhHHhhhcCCeEeecccchhhHHHhhcC
Q 017567          208 PFVLPLAHKHNIKILPADSEHSAIFQCIQG  237 (369)
Q Consensus       208 ~li~~~a~k~~~~IlPVDSEHsAIfQ~L~g  237 (369)
                      .+..+.++..-.+|+=.|.--.++||.-+.
T Consensus       265 el~~qil~~~p~~i~l~~~~E~~~~~i~~e  294 (588)
T COG1086         265 ELCRQILKFNPKEIILFSRDEYKLYLIDME  294 (588)
T ss_pred             HHHHHHHhcCCCEEEEecCchHHHHHHHHH
Confidence            456677777678899999888888887553

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=87.82  E-value=3.7  Score=39.39  Aligned_cols=53  Identities=21%  Similarity=0.187  Sum_probs=35.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC--CHHHHHHHHHhhCCCEEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS--NITLLADQVKRFKPQVVA  130 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~--Nv~lL~eQ~~~FkP~~V~  130 (369)
                      .|++.|.|++|.||.....-+.+.  ..+|+...-+.  ..+.+.++++....+.+.
T Consensus        12 ~k~~lVTGas~gIG~~ia~~L~~~--Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~   66 (306)
T PRK07792         12 GKVAVVTGAAAGLGRAEALGLARL--GATVVVNDVASALDASDVLDEIRAAGAKAVA   66 (306)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEecCCchhHHHHHHHHHHhcCCeEEE
Confidence            368999999999999998888876  45666543322  345555666655444433

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=87.78  E-value=3.7  Score=41.44  Aligned_cols=51  Identities=24%  Similarity=0.260  Sum_probs=40.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEE
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVV  129 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V  129 (369)
                      |++.|.|+||.||....+.+.++  .++|+.+....+.+.+.+...+.+...+
T Consensus       211 ~~vlItGasggIG~~la~~l~~~--Ga~vi~~~~~~~~~~l~~~~~~~~~~~~  261 (450)
T PRK08261        211 KVALVTGAARGIGAAIAEVLARD--GAHVVCLDVPAAGEALAAVANRVGGTAL  261 (450)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCCccHHHHHHHHHHcCCeEE
Confidence            68999999999999999998876  6788887666677777777776654433

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=87.72  E-value=0.66  Score=49.75  Aligned_cols=33  Identities=24%  Similarity=0.459  Sum_probs=28.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      ++|.|.|+||+||+...+-+.+. ..++|+++.-
T Consensus       316 ~~VLVTGatGFIGs~Lv~~Ll~~-~g~~V~~l~r  348 (660)
T PRK08125        316 TRVLILGVNGFIGNHLTERLLRD-DNYEVYGLDI  348 (660)
T ss_pred             CEEEEECCCchHHHHHHHHHHhC-CCcEEEEEeC
Confidence            57999999999999999988764 2599999874

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=87.71  E-value=7.8  Score=36.08  Aligned_cols=93  Identities=18%  Similarity=0.221  Sum_probs=57.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCc-hhHHHHHHHHhcCCCCceEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNE-SLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de-~~~~~l~~~l~~~~~~~~v~  154 (369)
                      ..+|.|.|++|.+|..++.+.+.+  ..+|++++  ++-+. .+.++++..+.+.-..+ ...+                
T Consensus       143 ~~~vlI~g~~~~~g~~~~~la~~~--g~~v~~~~--~~~~~-~~~~~~~g~~~~~~~~~~~~~~----------------  201 (324)
T cd08244         143 GDVVLVTAAAGGLGSLLVQLAKAA--GATVVGAA--GGPAK-TALVRALGADVAVDYTRPDWPD----------------  201 (324)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEe--CCHHH-HHHHHHcCCCEEEecCCccHHH----------------
Confidence            357999999999999999999987  46676664  33333 34456666655432211 1111                


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCc
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~  194 (369)
                          .+.+......+|+|++.+.|-. ....+.++..+-+
T Consensus       202 ----~~~~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~g~  236 (324)
T cd08244         202 ----QVREALGGGGVTVVLDGVGGAI-GRAALALLAPGGR  236 (324)
T ss_pred             ----HHHHHcCCCCceEEEECCChHh-HHHHHHHhccCcE
Confidence                1222223235899999876654 4667777765544

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=87.71  E-value=2  Score=42.92  Aligned_cols=42  Identities=19%  Similarity=0.333  Sum_probs=27.3

Q ss_pred             EEEEecCChHhHHHHHHHHhC-CCceEEEEEeecCCHHHHHHHHHhh
Q 017567           79 ISVLGSTGSIGTQTLDIVAEH-EDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        79 I~ILGSTGSIGtqTLdVI~~~-pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      |.|.|+|||||.....-+.++ |.+  |+.+.  +|-..|.+.-+++
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~--lil~d--~~E~~l~~l~~~l   43 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKK--LILFD--RDENKLYELEREL   43 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SE--EEEEE--S-HHHHHHHHHHC
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCe--EEEeC--CChhHHHHHHHHH
Confidence            679999999999988777654 433  33332  4455555555655

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK06123 short chain dehydrogenase; Provisional

Probab=87.60  E-value=3.8  Score=36.87  Aligned_cols=41  Identities=24%  Similarity=0.255  Sum_probs=29.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ  120 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ  120 (369)
                      |.+.|.|+||.||....+-+.+.  .+.|+ +...++-+.+.++
T Consensus         3 ~~~lVtG~~~~iG~~~a~~l~~~--G~~vv-~~~~~~~~~~~~~   43 (248)
T PRK06123          3 KVMIITGASRGIGAATALLAAER--GYAVC-LNYLRNRDAAEAV   43 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHC--CCeEE-EecCCCHHHHHHH
Confidence            57999999999999998888775  45665 4444555544443

>PRK07069 short chain dehydrogenase; Validated

Probab=87.52  E-value=4.9  Score=36.15  Aligned_cols=43  Identities=16%  Similarity=0.188  Sum_probs=30.5

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~  123 (369)
                      ++.|.|+||.||....+-+.+.  .++|+.+.-. ..+.+.+...+
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~--G~~v~~~~r~-~~~~~~~~~~~   43 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQ--GAKVFLTDIN-DAAGLDAFAAE   43 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHC--CCEEEEEeCC-cchHHHHHHHH
Confidence            4899999999999999999875  5788766532 23444444433

>PRK06953 short chain dehydrogenase; Provisional

Probab=87.48  E-value=5.4  Score=35.78  Aligned_cols=39  Identities=26%  Similarity=0.410  Sum_probs=30.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLA  118 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~  118 (369)
                      +|++.|.|+||.||..+.+-+.+.  .++|+.+.  +|.+.+.
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~--G~~v~~~~--r~~~~~~   39 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRAD--GWRVIATA--RDAAALA   39 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhC--CCEEEEEE--CCHHHHH
Confidence            468999999999999999988765  57877753  4555543

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=87.46  E-value=6.7  Score=37.86  Aligned_cols=46  Identities=11%  Similarity=0.257  Sum_probs=33.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      .|.+.|.|+|+.||..+.+-+.+.. .++|+.++  +|.+.+.+.+++.
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G-~~~V~l~~--r~~~~~~~~~~~l   48 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATG-EWHVIMAC--RDFLKAEQAAKSL   48 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcC-CCEEEEEe--CCHHHHHHHHHHh
Confidence            3579999999999999998888753 16776643  5666665555554

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=87.42  E-value=7.4  Score=35.68  Aligned_cols=94  Identities=14%  Similarity=0.174  Sum_probs=56.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      ++|.|.|++|.+|..++.+.+..  ..+|+.++..  -+.+.. .+++..+.+.-.+...   +                
T Consensus       146 ~~vli~g~~~~~g~~~~~~~~~~--g~~v~~~~~~--~~~~~~-~~~~g~~~~~~~~~~~---~----------------  201 (328)
T cd08268         146 DSVLITAASSSVGLAAIQIANAA--GATVIATTRT--SEKRDA-LLALGAAHVIVTDEED---L----------------  201 (328)
T ss_pred             CEEEEecCccHHHHHHHHHHHHc--CCEEEEEcCC--HHHHHH-HHHcCCCEEEecCCcc---H----------------
Confidence            58999999999999999999876  4566665432  344333 3555544333222111   1                


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCce
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~i  195 (369)
                      .+.+.+......+|.+++...| .++...+.++..+-++
T Consensus       202 ~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~g~~  239 (328)
T cd08268         202 VAEVLRITGGKGVDVVFDPVGG-PQFAKLADALAPGGTL  239 (328)
T ss_pred             HHHHHHHhCCCCceEEEECCch-HhHHHHHHhhccCCEE
Confidence            1122333333358999988666 6667777777655443

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=87.40  E-value=6.1  Score=37.56  Aligned_cols=94  Identities=16%  Similarity=0.130  Sum_probs=58.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCc-hhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNE-SLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de-~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .+|.|.|++|+||..++.+.+..  ..+|++.+.  +-++ .+.++++..+.+.-.++ +..   .+             
T Consensus       140 ~~VLI~ga~g~vG~~aiqlAk~~--G~~Vi~~~~--s~~~-~~~~~~lGa~~vi~~~~~~~~---~~-------------  198 (325)
T TIGR02825       140 ETVMVNAAAGAVGSVVGQIAKLK--GCKVVGAAG--SDEK-VAYLKKLGFDVAFNYKTVKSL---EE-------------  198 (325)
T ss_pred             CEEEEeCCccHHHHHHHHHHHHc--CCEEEEEeC--CHHH-HHHHHHcCCCEEEeccccccH---HH-------------
Confidence            58999999999999999999876  456776543  3344 35567788776654332 111   11             


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCcee
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~ia  196 (369)
                         .+.++. ...+|+|++++.| ..+...+..++.|=++.
T Consensus       199 ---~~~~~~-~~gvdvv~d~~G~-~~~~~~~~~l~~~G~iv  234 (325)
T TIGR02825       199 ---TLKKAS-PDGYDCYFDNVGG-EFSNTVIGQMKKFGRIA  234 (325)
T ss_pred             ---HHHHhC-CCCeEEEEECCCH-HHHHHHHHHhCcCcEEE
Confidence               111121 2258999987654 45566667776655543

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=87.38  E-value=5.3  Score=36.94  Aligned_cols=45  Identities=16%  Similarity=0.190  Sum_probs=33.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      +.+.|.|+||.||..+.+-+.+.  .++|+.+ +.++.+.+.+...++
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~--G~~V~~~-~~~~~~~~~~~~~~l   46 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQE--GYRVVLH-YHRSAAAASTLAAEL   46 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhC--CCeEEEE-cCCcHHHHHHHHHHH
Confidence            36899999999999999998875  5677765 455555555554444

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=87.32  E-value=0.69  Score=46.23  Aligned_cols=35  Identities=29%  Similarity=0.559  Sum_probs=28.2

Q ss_pred             eEEEEecCChHhHHHHHHHHh--CCCceEEEEEeecCC
Q 017567           78 PISVLGSTGSIGTQTLDIVAE--HEDKFRVVALAAGSN  113 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~--~pd~F~VvaLaag~N  113 (369)
                      +|+|+|+||.+|...++.+.+  || .++++.++..++
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp-~~~l~~~as~~~   37 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFP-IDKLVLLASDRS   37 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCC-hhhEEEEecccc
Confidence            589999999999999999988  65 367776655443

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PRK08703 short chain dehydrogenase; Provisional

Probab=87.31  E-value=1.5  Score=39.53  Aligned_cols=43  Identities=23%  Similarity=0.247  Sum_probs=32.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~  123 (369)
                      |++.|+|+||.||....+.+.+.  .++|+.++  +|.+.+.+...+
T Consensus         7 k~vlItG~sggiG~~la~~l~~~--g~~V~~~~--r~~~~~~~~~~~   49 (239)
T PRK08703          7 KTILVTGASQGLGEQVAKAYAAA--GATVILVA--RHQKKLEKVYDA   49 (239)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHc--CCEEEEEe--CChHHHHHHHHH
Confidence            68999999999999999999875  57776654  455555544443

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=87.27  E-value=6.5  Score=36.69  Aligned_cols=95  Identities=13%  Similarity=0.109  Sum_probs=56.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      .+|.|.|++|+||..++.+.+..  ..+++..+..  -+. .+.++++..+.+.-.++..   +.               
T Consensus       141 ~~vlI~g~~g~ig~~~~~~a~~~--G~~v~~~~~~--~~~-~~~~~~~g~~~~~~~~~~~---~~---------------  197 (324)
T cd08292         141 QWLIQNAAGGAVGKLVAMLAAAR--GINVINLVRR--DAG-VAELRALGIGPVVSTEQPG---WQ---------------  197 (324)
T ss_pred             CEEEEcccccHHHHHHHHHHHHC--CCeEEEEecC--HHH-HHHHHhcCCCEEEcCCCch---HH---------------
Confidence            58999999999999999999987  4566665432  222 2333445544433222111   11               


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCcee
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~ia  196 (369)
                       +.+.++.....+|+|++...| ..+...+..++.+-++.
T Consensus       198 -~~i~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~g~~v  235 (324)
T cd08292         198 -DKVREAAGGAPISVALDSVGG-KLAGELLSLLGEGGTLV  235 (324)
T ss_pred             -HHHHHHhCCCCCcEEEECCCC-hhHHHHHHhhcCCcEEE
Confidence             122333333458999987555 45666677776655444

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=87.24  E-value=1.2  Score=41.51  Aligned_cols=41  Identities=17%  Similarity=0.350  Sum_probs=28.4

Q ss_pred             EEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHH
Q 017567           81 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQV  121 (369)
Q Consensus        81 ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~  121 (369)
                      |-||||++|...|+-+-+.++..+|++|.=.+|.+...+.+
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl   41 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERL   41 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhh
Confidence            57999999999998777766533999998777764443333

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=87.20  E-value=3.7  Score=38.08  Aligned_cols=30  Identities=37%  Similarity=0.500  Sum_probs=25.3

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      ||.|+|+||.||....+-+.++  .++|+++.
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~--g~~V~~~~   30 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLES--GHEVVVLD   30 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhC--CCeEEEEe
Confidence            5899999999999999988776  57787663

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=87.20  E-value=5.4  Score=38.84  Aligned_cols=94  Identities=12%  Similarity=0.142  Sum_probs=57.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceE-EEEEeecCCHHHHHHHHHhhCCCEEEEcCc-hhHHHHHHHHhcCCCCceE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFR-VVALAAGSNITLLADQVKRFKPQVVAVRNE-SLLDEIKEALANVEEKPEI  153 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~-VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de-~~~~~l~~~l~~~~~~~~v  153 (369)
                      ..+|.|.|+ |.||..++.+.+..  ..+ |+++..  +-++ .+.++++..+.+.-..+ +..+.              
T Consensus       177 g~~VlV~G~-g~vG~~a~~~ak~~--G~~~Vi~~~~--~~~~-~~~~~~~Ga~~~i~~~~~~~~~~--------------  236 (358)
T TIGR03451       177 GDSVAVIGC-GGVGDAAIAGAALA--GASKIIAVDI--DDRK-LEWAREFGATHTVNSSGTDPVEA--------------  236 (358)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCCeEEEEcC--CHHH-HHHHHHcCCceEEcCCCcCHHHH--------------
Confidence            357999985 99999999999976  453 665533  3334 34557787766543222 11111              


Q ss_pred             EecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCce
Q 017567          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (369)
Q Consensus       154 ~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~i  195 (369)
                            +.++.....+|+|++++.+-..+.-.+.+++.|=++
T Consensus       237 ------i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~i  272 (358)
T TIGR03451       237 ------IRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTV  272 (358)
T ss_pred             ------HHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEE
Confidence                  222223335899999876555566666666655443

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=87.15  E-value=6.8  Score=37.66  Aligned_cols=90  Identities=18%  Similarity=0.234  Sum_probs=58.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      ..+|.|.|++|++|..++.+.+..  .++|++.+ ..  +++ +.+++|....+.-.....   +.+             
T Consensus       155 ~~~vlI~ga~g~vg~~~~~~a~~~--G~~v~~~~-~~--~~~-~~~~~~g~~~v~~~~~~~---~~~-------------  212 (339)
T cd08249         155 GKPVLIWGGSSSVGTLAIQLAKLA--GYKVITTA-SP--KNF-DLVKSLGADAVFDYHDPD---VVE-------------  212 (339)
T ss_pred             CCEEEEEcChhHHHHHHHHHHHHc--CCeEEEEE-Cc--ccH-HHHHhcCCCEEEECCCch---HHH-------------
Confidence            368999999999999999999987  56788766 32  333 233667665544322111   111             


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHc
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEA  191 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~  191 (369)
                         .+.++.. ..+|.|++.+.+-..+...+.+++.
T Consensus       213 ---~l~~~~~-~~~d~vl~~~g~~~~~~~~~~~l~~  244 (339)
T cd08249         213 ---DIRAATG-GKLRYALDCISTPESAQLCAEALGR  244 (339)
T ss_pred             ---HHHHhcC-CCeeEEEEeeccchHHHHHHHHHhc
Confidence               1222333 3589999876554788888888886

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=86.99  E-value=4.9  Score=36.84  Aligned_cols=43  Identities=19%  Similarity=0.175  Sum_probs=31.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQV  121 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~  121 (369)
                      .|++.|.|++|.||....+.+.+.  .++|+. .+.++.+.+.++.
T Consensus         7 ~k~~lItGa~~gIG~~ia~~l~~~--G~~vvi-~~~~~~~~~~~~~   49 (261)
T PRK08936          7 GKVVVITGGSTGLGRAMAVRFGKE--KAKVVI-NYRSDEEEANDVA   49 (261)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC--CCEEEE-EeCCCHHHHHHHH
Confidence            368999999999999999988876  456654 4555554444333

>PLN00198 anthocyanidin reductase; Provisional

Probab=86.87  E-value=0.86  Score=43.75  Aligned_cols=33  Identities=18%  Similarity=0.363  Sum_probs=28.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      .|+|.|.|+||+||+...+-+.+.  .++|+++.-
T Consensus         9 ~~~vlItG~~GfIG~~l~~~L~~~--g~~V~~~~r   41 (338)
T PLN00198          9 KKTACVIGGTGFLASLLIKLLLQK--GYAVNTTVR   41 (338)
T ss_pred             CCeEEEECCchHHHHHHHHHHHHC--CCEEEEEEC
Confidence            468999999999999999988875  578887763

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=86.86  E-value=15  Score=34.10  Aligned_cols=95  Identities=12%  Similarity=0.169  Sum_probs=59.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCch-hHHHHHHHHhcCCCCceEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNES-LLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~-~~~~l~~~l~~~~~~~~v~  154 (369)
                      ..+|.|.|++|.||..++.+.+..  ..+|++++..  -+++ +++++|..+.+.-..+. ....               
T Consensus       139 ~~~vlI~g~~~~vg~~~~~~a~~~--g~~v~~~~~~--~~~~-~~~~~~g~~~~~~~~~~~~~~~---------------  198 (323)
T cd05282         139 GDWVIQNAANSAVGRMLIQLAKLL--GFKTINVVRR--DEQV-EELKALGADEVIDSSPEDLAQR---------------  198 (323)
T ss_pred             CCEEEEcccccHHHHHHHHHHHHC--CCeEEEEecC--hHHH-HHHHhcCCCEEecccchhHHHH---------------
Confidence            358999999999999999999986  5677765433  3443 45577776555433221 1111               


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCcee
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~ia  196 (369)
                           +.+......+|.|++...| ..+...+..++.+=++.
T Consensus       199 -----~~~~~~~~~~d~vl~~~g~-~~~~~~~~~l~~~g~~v  234 (323)
T cd05282         199 -----VKEATGGAGARLALDAVGG-ESATRLARSLRPGGTLV  234 (323)
T ss_pred             -----HHHHhcCCCceEEEECCCC-HHHHHHHHhhCCCCEEE
Confidence                 2222222358899987655 45666777776654443

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=86.52  E-value=6.6  Score=37.79  Aligned_cols=97  Identities=15%  Similarity=0.117  Sum_probs=59.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .++|.|+|+ |.+|..++.+.+..  ..+++..+ .++-+++. .++++..+.+.-.++...+++               
T Consensus       161 g~~vlV~G~-g~vG~~~~~~a~~~--G~~~v~~~-~~~~~~~~-~~~~~Ga~~~i~~~~~~~~~~---------------  220 (347)
T PRK10309        161 GKNVIIIGA-GTIGLLAIQCAVAL--GAKSVTAI-DINSEKLA-LAKSLGAMQTFNSREMSAPQI---------------  220 (347)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCCeEEEE-CCCHHHHH-HHHHcCCceEecCcccCHHHH---------------
Confidence            358999985 99999999999977  45433222 34555554 457777665543222112222               


Q ss_pred             cHHHHHHHhcCCCCC-EEEEeccCccCcHHHHHHHHcCCceee
Q 017567          156 GEQGVIEAARHPDAV-TVVTGIVGCAGLKPTVAAIEAGKDIAL  197 (369)
Q Consensus       156 G~~gl~~~~~~~~~D-~Vv~AIvG~aGL~pt~~Ai~~gK~iaL  197 (369)
                           .++.....+| +|++++-+...+.-.+.+++.|-++.+
T Consensus       221 -----~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~  258 (347)
T PRK10309        221 -----QSVLRELRFDQLILETAGVPQTVELAIEIAGPRAQLAL  258 (347)
T ss_pred             -----HHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEE
Confidence                 2222223467 888987666667777888888866543

>PRK06027 purU formyltetrahydrofolate deformylase; Reviewed

Probab=86.40  E-value=7.8  Score=38.15  Aligned_cols=134  Identities=16%  Similarity=0.157  Sum_probs=81.0

Q ss_pred             CCCCCeeEEEEecCChHhHHHHHHHHhCCC---ceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCc----hhH-HHHHHH
Q 017567           72 TWDGPKPISVLGSTGSIGTQTLDIVAEHED---KFRVVALAAGSNITLLADQVKRFKPQVVAVRNE----SLL-DEIKEA  143 (369)
Q Consensus        72 ~~~~~kkI~ILGSTGSIGtqTLdVI~~~pd---~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de----~~~-~~l~~~  143 (369)
                      +...|+||+||+|.+  |++--.++.+...   .++|+++.+++  +.+...++++.-.+..+...    +.+ .++.+.
T Consensus        85 ~~~~~~ri~vl~Sg~--gsnl~al~~~~~~~~~~~~i~~visn~--~~~~~lA~~~gIp~~~~~~~~~~~~~~~~~~~~~  160 (286)
T PRK06027         85 DSAERKRVVILVSKE--DHCLGDLLWRWRSGELPVEIAAVISNH--DDLRSLVERFGIPFHHVPVTKETKAEAEARLLEL  160 (286)
T ss_pred             ccccCcEEEEEEcCC--CCCHHHHHHHHHcCCCCcEEEEEEEcC--hhHHHHHHHhCCCEEEeccCccccchhHHHHHHH
Confidence            334578999999988  9988888865433   68999998765  23344588877776664321    111 133444


Q ss_pred             HhcCCCCceEEecHHHHH--HHhcCCCCCEEEE----eccCccCcHHHHHHHHcCC-----ceeeecccceeecccchhH
Q 017567          144 LANVEEKPEILAGEQGVI--EAARHPDAVTVVT----GIVGCAGLKPTVAAIEAGK-----DIALANKETLIAGGPFVLP  212 (369)
Q Consensus       144 l~~~~~~~~v~~G~~gl~--~~~~~~~~D~Vv~----AIvG~aGL~pt~~Ai~~gK-----~iaLANKEsLV~aG~li~~  212 (369)
                      +...+.+.-|++|---+.  ++.+..+ .-++|    -+.-+-|..|...|+.+|.     +|=..+.|  +-.|+.|.+
T Consensus       161 l~~~~~Dlivlagy~~il~~~~l~~~~-~~iiNiHpSLLP~yrG~~~~~~ai~~G~~~tG~TiH~v~~~--~D~G~Ii~Q  237 (286)
T PRK06027        161 IDEYQPDLVVLARYMQILSPDFVARFP-GRIINIHHSFLPAFKGAKPYHQAYERGVKLIGATAHYVTAD--LDEGPIIEQ  237 (286)
T ss_pred             HHHhCCCEEEEecchhhcCHHHHhhcc-CCceecCcccCCCCCCCCHHHHHHHCCCCeEEEEEEEEcCC--CcCCCcEEE
Confidence            444444555666643322  1333221 23343    2455788999999999986     34455554  367777744

>PRK07791 short chain dehydrogenase; Provisional

Probab=86.37  E-value=7.2  Score=36.94  Aligned_cols=32  Identities=28%  Similarity=0.293  Sum_probs=25.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      .|.+.|.|+++.||..+.+-+.+.  ..+|+.+.
T Consensus         6 ~k~~lITGas~GIG~aia~~la~~--G~~vii~~   37 (286)
T PRK07791          6 GRVVIVTGAGGGIGRAHALAFAAE--GARVVVND   37 (286)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEee
Confidence            368999999999999999888875  46666653

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=86.34  E-value=7.8  Score=37.81  Aligned_cols=92  Identities=11%  Similarity=0.168  Sum_probs=57.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .+|.|.|+ |+||..++.+.+..  .+ +|+++...  -++ .+.++++..+.+.-.++. -+.+.+             
T Consensus       189 ~~VlV~G~-g~vG~~a~q~ak~~--G~~~vi~~~~~--~~~-~~~~~~~Ga~~~i~~~~~-~~~~~~-------------  248 (369)
T cd08301         189 STVAIFGL-GAVGLAVAEGARIR--GASRIIGVDLN--PSK-FEQAKKFGVTEFVNPKDH-DKPVQE-------------  248 (369)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHc--CCCeEEEEcCC--HHH-HHHHHHcCCceEEccccc-chhHHH-------------
Confidence            58999985 99999999999976  45 56665432  333 345677876554422210 011111             


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcC
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~g  192 (369)
                         .+.++... .+|+|++++-+-..+...+.+++.|
T Consensus       249 ---~v~~~~~~-~~d~vid~~G~~~~~~~~~~~~~~~  281 (369)
T cd08301         249 ---VIAEMTGG-GVDYSFECTGNIDAMISAFECVHDG  281 (369)
T ss_pred             ---HHHHHhCC-CCCEEEECCCChHHHHHHHHHhhcC
Confidence               22333333 5899999976666777777887763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=86.26  E-value=4.9  Score=38.67  Aligned_cols=94  Identities=14%  Similarity=0.096  Sum_probs=57.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      ++|.|.|+ |++|..++.+.+..  .+ .|++.+  ++-+++ ++++++..+.+.-..+..   +.              
T Consensus       174 ~~vlI~g~-g~vG~~a~q~a~~~--G~~~v~~~~--~~~~~~-~~~~~~ga~~~i~~~~~~---~~--------------  230 (351)
T cd08233         174 DTALVLGA-GPIGLLTILALKAA--GASKIIVSE--PSEARR-ELAEELGATIVLDPTEVD---VV--------------  230 (351)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHc--CCCEEEEEC--CCHHHH-HHHHHhCCCEEECCCccC---HH--------------
Confidence            57999984 99999999999986  56 565553  344443 455667665544222111   11              


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCce
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~i  195 (369)
                        +.+.++.....+|.|++.+.+...+...+.+++.+-++
T Consensus       231 --~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~  268 (351)
T cd08233         231 --AEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTA  268 (351)
T ss_pred             --HHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEE
Confidence              12223333335899999865555666677777666543

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=86.24  E-value=12  Score=34.04  Aligned_cols=49  Identities=18%  Similarity=0.317  Sum_probs=33.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVV  129 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V  129 (369)
                      .++|.|.|++|+||..+..+.+..  .++|+..+  ++-+.+. .++++..+.+
T Consensus       140 ~~~vlv~g~~~~ig~~~~~~~~~~--g~~v~~~~--~~~~~~~-~~~~~g~~~~  188 (323)
T cd05276         140 GETVLIHGGASGVGTAAIQLAKAL--GARVIATA--GSEEKLE-ACRALGADVA  188 (323)
T ss_pred             CCEEEEEcCcChHHHHHHHHHHHc--CCEEEEEc--CCHHHHH-HHHHcCCCEE
Confidence            368999999999999999999987  45555543  3334433 3355665444

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK10124 putative UDP-glucose lipid carrier transferase; Provisional

Probab=86.10  E-value=6  Score=41.21  Aligned_cols=59  Identities=20%  Similarity=0.203  Sum_probs=48.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCC-ceEEEEEee-----------cCCHHHHHHHHHhhCCCEEEEcCch
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHED-KFRVVALAA-----------GSNITLLADQVKRFKPQVVAVRNES  135 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd-~F~VvaLaa-----------g~Nv~lL~eQ~~~FkP~~V~v~de~  135 (369)
                      .+++.|+| +|+-|.+..+-++++|+ .|+++|..-           -.|.+.|.+.+++.+.+.|.++-+.
T Consensus       143 ~rrVLIvG-aG~~g~~l~~~L~~~~~~g~~vVGfiDdd~~~g~~VpvlG~~~dL~~~v~~~~IdeViIAip~  213 (463)
T PRK10124        143 KRMVAVAG-DLPAGQMLLESFRNEPWLGFEVVGVYHDPKPGGVSNDWAGNLQQLVEDAKAGKIHNVYIAMSM  213 (463)
T ss_pred             CCcEEEEE-CCHHHHHHHHHHhcCccCCeEEEEEEeCCccccCCCCcCCCHHHHHHHHHhCCCCEEEEeCCC
Confidence            46899998 57889999999988876 699999764           3577889999999999999987643

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=86.03  E-value=1.1  Score=42.47  Aligned_cols=34  Identities=21%  Similarity=0.354  Sum_probs=28.0

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      ..|+|.|.|+||.||.+..+-+.+.  .++|++++-
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~--G~~V~~~~r   37 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFR--GYTINATVR   37 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHC--CCEEEEEEc
Confidence            3578999999999999999988775  678877653

>PRK07577 short chain dehydrogenase; Provisional

Probab=86.02  E-value=5  Score=35.81  Aligned_cols=31  Identities=26%  Similarity=0.328  Sum_probs=26.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      |++.|.|+||.||.+...-+.+.  .++|+++.
T Consensus         4 k~vlItG~s~~iG~~ia~~l~~~--G~~v~~~~   34 (234)
T PRK07577          4 RTVLVTGATKGIGLALSLRLANL--GHQVIGIA   34 (234)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHC--CCEEEEEe
Confidence            67999999999999999988876  46787765

>PLN02775 Probable dihydrodipicolinate reductase

Probab=85.98  E-value=7.9  Score=38.66  Aligned_cols=32  Identities=25%  Similarity=0.442  Sum_probs=28.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      .+|+|.|++|=.|+.+.+-+.+  +.|++|+...
T Consensus        12 i~V~V~Ga~G~MG~~~~~av~~--~~~~Lv~~~~   43 (286)
T PLN02775         12 IPIMVNGCTGKMGHAVAEAAVS--AGLQLVPVSF   43 (286)
T ss_pred             CeEEEECCCChHHHHHHHHHhc--CCCEEEEEec
Confidence            4899999999999999999998  6699999644

>PRK07201 short chain dehydrogenase; Provisional

Probab=85.93  E-value=6.5  Score=41.31  Aligned_cols=44  Identities=30%  Similarity=0.272  Sum_probs=33.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~  123 (369)
                      .|++.|.|+||.||....+-+.+.  .++|+.++  +|-+.+.+...+
T Consensus       371 ~k~vlItGas~giG~~la~~l~~~--G~~V~~~~--r~~~~~~~~~~~  414 (657)
T PRK07201        371 GKVVLITGASSGIGRATAIKVAEA--GATVFLVA--RNGEALDELVAE  414 (657)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHH
Confidence            368999999999999999988876  56777764  455665554443

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=85.89  E-value=7.7  Score=35.83  Aligned_cols=46  Identities=17%  Similarity=0.221  Sum_probs=33.3

Q ss_pred             CeeEEEEecC--ChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCC
Q 017567           76 PKPISVLGST--GSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKP  126 (369)
Q Consensus        76 ~kkI~ILGST--GSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP  126 (369)
                      .|.+.|.|++  +.||..+.+-+.+.  .++|+.. + +| +.+.+++++...
T Consensus         7 ~k~~lItGas~~~gIG~a~a~~la~~--G~~Vi~~-~-r~-~~~~~~~~~~~~   54 (252)
T PRK06079          7 GKKIVVMGVANKRSIAWGCAQAIKDQ--GATVIYT-Y-QN-DRMKKSLQKLVD   54 (252)
T ss_pred             CCEEEEeCCCCCCchHHHHHHHHHHC--CCEEEEe-c-Cc-hHHHHHHHhhcc
Confidence            4689999999  78999999998875  6777754 3 45 455555655543

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=85.75  E-value=6  Score=38.79  Aligned_cols=94  Identities=16%  Similarity=0.130  Sum_probs=58.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .+|.|.|+ |.||..++.+.+..  .. +|+++.  .+-+++ +.++++..+.+.-..+..   +.+             
T Consensus       193 ~~VlV~G~-G~vG~~a~~lak~~--G~~~Vi~~~--~~~~r~-~~a~~~Ga~~~i~~~~~~---~~~-------------  250 (371)
T cd08281         193 QSVAVVGL-GGVGLSALLGAVAA--GASQVVAVD--LNEDKL-ALARELGATATVNAGDPN---AVE-------------  250 (371)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHc--CCCcEEEEc--CCHHHH-HHHHHcCCceEeCCCchh---HHH-------------
Confidence            57999995 99999999999876  45 465553  344444 456778776554322211   111             


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCcee
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~ia  196 (369)
                         .+.++... .+|+|++++-+-..+.-.+.+++.|=++.
T Consensus       251 ---~i~~~~~~-g~d~vid~~G~~~~~~~~~~~l~~~G~iv  287 (371)
T cd08281         251 ---QVRELTGG-GVDYAFEMAGSVPALETAYEITRRGGTTV  287 (371)
T ss_pred             ---HHHHHhCC-CCCEEEECCCChHHHHHHHHHHhcCCEEE
Confidence               12222222 58999998755567777777877765543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=85.70  E-value=8.9  Score=36.37  Aligned_cols=99  Identities=9%  Similarity=0.097  Sum_probs=58.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC-HHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN-ITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~N-v~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      .++|.|.|++|++|..++.+.+..  ..+|++.+.... .+.-.+.++++..+.+.-.++.....+.             
T Consensus       147 g~~vlI~g~~g~vg~~~~~~a~~~--g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-------------  211 (341)
T cd08290         147 GDWVIQNGANSAVGQAVIQLAKLL--GIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLAT-------------  211 (341)
T ss_pred             CCEEEEccchhHHHHHHHHHHHHc--CCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHH-------------
Confidence            468999999999999999999987  577877765321 1122344466776665533221000011             


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCc
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~  194 (369)
                         +.+..+... .+|.|++...| ..+...+..++.+-+
T Consensus       212 ---~~i~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~  246 (341)
T cd08290         212 ---ELLKSAPGG-RPKLALNCVGG-KSATELARLLSPGGT  246 (341)
T ss_pred             ---HHHHHHcCC-CceEEEECcCc-HhHHHHHHHhCCCCE
Confidence               112222222 58899987555 455566666655443

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=85.54  E-value=1.1  Score=42.05  Aligned_cols=32  Identities=25%  Similarity=0.378  Sum_probs=27.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      ++|.|+|+||.||....+-+.+.  .++|+++.-
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~--g~~V~~~~r   32 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQ--GEEVRVLVR   32 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHC--CCEEEEEEe
Confidence            37999999999999999998876  578888764

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=85.53  E-value=10  Score=36.25  Aligned_cols=97  Identities=12%  Similarity=0.148  Sum_probs=59.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      ++|.|.| .|++|..++.+.+...-+ +|++.  .++-+++ +.++++..+.+.-.++..   +.               
T Consensus       165 ~~vlV~~-~g~vg~~~~~la~~~G~~-~v~~~--~~~~~~~-~~~~~lg~~~~~~~~~~~---~~---------------  221 (341)
T PRK05396        165 EDVLITG-AGPIGIMAAAVAKHVGAR-HVVIT--DVNEYRL-ELARKMGATRAVNVAKED---LR---------------  221 (341)
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHcCCC-EEEEE--cCCHHHH-HHHHHhCCcEEecCcccc---HH---------------
Confidence            5788876 599999999999886321 34444  3344444 456677766554322211   11               


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceee
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIAL  197 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaL  197 (369)
                       +.+.++.....+|.|+++..+-..+...+.+++.+-++.+
T Consensus       222 -~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~  261 (341)
T PRK05396        222 -DVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAM  261 (341)
T ss_pred             -HHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEE
Confidence             1122233334589999976666678888888887766543

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=85.49  E-value=1.2  Score=41.23  Aligned_cols=32  Identities=25%  Similarity=0.288  Sum_probs=27.7

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (369)
                      +|.|.|+||+||+...+-+.+.  .++|+++.-.
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~--g~~V~~~~r~   33 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAA--GHDVRGLDRL   33 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhC--CCeEEEEeCC
Confidence            4999999999999999988876  7889998754

>PRK06125 short chain dehydrogenase; Provisional

Probab=85.39  E-value=4.5  Score=37.07  Aligned_cols=44  Identities=16%  Similarity=0.258  Sum_probs=33.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      |++.|.|+||.||..+.+.+.+.  .++|+.+.  +|.+.+.+...+.
T Consensus         8 k~vlItG~~~giG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~l   51 (259)
T PRK06125          8 KRVLITGASKGIGAAAAEAFAAE--GCHLHLVA--RDADALEALAADL   51 (259)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHc--CCEEEEEe--CCHHHHHHHHHHH
Confidence            68999999999999999999876  56777654  4556665554443

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=85.34  E-value=7  Score=36.82  Aligned_cols=88  Identities=18%  Similarity=0.265  Sum_probs=58.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      .+|.|+|++|+||..++.+.+..  ..+|++++  +     .+.+++|..+.+.-.  ..   .                
T Consensus       164 ~~vlI~g~~g~vg~~~~~~a~~~--G~~v~~~~--~-----~~~~~~~g~~~~~~~--~~---~----------------  213 (325)
T cd08264         164 ETVVVFGASGNTGIFAVQLAKMM--GAEVIAVS--R-----KDWLKEFGADEVVDY--DE---V----------------  213 (325)
T ss_pred             CEEEEECCCchHHHHHHHHHHHc--CCeEEEEe--H-----HHHHHHhCCCeeecc--hH---H----------------
Confidence            58999999999999999999987  35677764  1     144556665544311  11   1                


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceee
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIAL  197 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaL  197 (369)
                      .+.+.++.  ..+|.|+++..+ ..+...+.+++.+-++..
T Consensus       214 ~~~l~~~~--~~~d~vl~~~g~-~~~~~~~~~l~~~g~~v~  251 (325)
T cd08264         214 EEKVKEIT--KMADVVINSLGS-SFWDLSLSVLGRGGRLVT  251 (325)
T ss_pred             HHHHHHHh--CCCCEEEECCCH-HHHHHHHHhhccCCEEEE
Confidence            11223333  358999998655 678888888887766554

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08230 glucose_DH Glucose dehydrogenase

Probab=85.30  E-value=4.9  Score=39.00  Aligned_cols=91  Identities=15%  Similarity=0.128  Sum_probs=55.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC-CHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS-NITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~-Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      ++|.|+|+ |.||..+..+++..  ..+|++..... +-+++ +.++++..+++. ..+...   .              
T Consensus       174 ~~vlI~G~-G~vG~~a~q~ak~~--G~~vi~~~~~~~~~~~~-~~~~~~Ga~~v~-~~~~~~---~--------------  231 (355)
T cd08230         174 RRALVLGA-GPIGLLAALLLRLR--GFEVYVLNRRDPPDPKA-DIVEELGATYVN-SSKTPV---A--------------  231 (355)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHc--CCeEEEEecCCCCHHHH-HHHHHcCCEEec-CCccch---h--------------
Confidence            57999996 99999999999886  45777765421 33444 467788877642 111110   0              


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCce
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~i  195 (369)
                        + . +  ....+|+|+++.-+-..+.-.+.+++.|-++
T Consensus       232 --~-~-~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~  265 (355)
T cd08230         232 --E-V-K--LVGEFDLIIEATGVPPLAFEALPALAPNGVV  265 (355)
T ss_pred             --h-h-h--hcCCCCEEEECcCCHHHHHHHHHHccCCcEE
Confidence              0 0 1  1236899999865444455556666655443

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PRK13011 formyltetrahydrofolate deformylase; Reviewed

Probab=85.15  E-value=11  Score=37.30  Aligned_cols=131  Identities=15%  Similarity=0.179  Sum_probs=79.2

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhC---CCceEEEEEeec-CCHHHHHHHHHhhCCCEEEEc----CchhH-HHHHHHH
Q 017567           74 DGPKPISVLGSTGSIGTQTLDIVAEH---EDKFRVVALAAG-SNITLLADQVKRFKPQVVAVR----NESLL-DEIKEAL  144 (369)
Q Consensus        74 ~~~kkI~ILGSTGSIGtqTLdVI~~~---pd~F~VvaLaag-~Nv~lL~eQ~~~FkP~~V~v~----de~~~-~~l~~~l  144 (369)
                      ..++||+||||.+  |++...++.+.   .-.++|+++.++ .++..|   ++++.-.+..+.    +...+ ..+.+.|
T Consensus        87 ~~~~ri~vl~Sg~--g~nl~al~~~~~~~~~~~~i~~visn~~~~~~l---A~~~gIp~~~~~~~~~~~~~~~~~~~~~l  161 (286)
T PRK13011         87 AARPKVLIMVSKF--DHCLNDLLYRWRIGELPMDIVGVVSNHPDLEPL---AAWHGIPFHHFPITPDTKPQQEAQVLDVV  161 (286)
T ss_pred             ccCceEEEEEcCC--cccHHHHHHHHHcCCCCcEEEEEEECCccHHHH---HHHhCCCEEEeCCCcCchhhhHHHHHHHH
Confidence            3456999999986  88888888643   235899998774 354444   888877776542    11111 1233334


Q ss_pred             hcCCCCceEEecHHHHH--HHhcCCCCCEEEE----eccCccCcHHHHHHHHcCC-----ceeeecccceeecccchhH
Q 017567          145 ANVEEKPEILAGEQGVI--EAARHPDAVTVVT----GIVGCAGLKPTVAAIEAGK-----DIALANKETLIAGGPFVLP  212 (369)
Q Consensus       145 ~~~~~~~~v~~G~~gl~--~~~~~~~~D~Vv~----AIvG~aGL~pt~~Ai~~gK-----~iaLANKEsLV~aG~li~~  212 (369)
                      ...+.+.-|++|---+.  ++.+.. ..-++|    -+.-+-|..|...|+.+|.     +|=..++|  +-+|+.+.+
T Consensus       162 ~~~~~Dlivlagy~~il~~~~l~~~-~~~iiNiHpSLLP~~rG~~~~~~ai~~G~~~tG~TvH~v~~~--~D~G~Ii~Q  237 (286)
T PRK13011        162 EESGAELVVLARYMQVLSPELCRKL-AGRAINIHHSFLPGFKGAKPYHQAYERGVKLIGATAHYVTDD--LDEGPIIEQ  237 (286)
T ss_pred             HHhCcCEEEEeChhhhCCHHHHhhc-cCCeEEeccccCCCCCCCcHHHHHHHCCCCeEEEEEEEEcCC--CcCCCcEEE
Confidence            43344455666653322  122222 123443    3566789999999999985     45566665  567888754

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=85.14  E-value=7  Score=36.02  Aligned_cols=31  Identities=23%  Similarity=0.184  Sum_probs=25.2

Q ss_pred             CeeEEEEecCC--hHhHHHHHHHHhCCCceEEEEE
Q 017567           76 PKPISVLGSTG--SIGTQTLDIVAEHEDKFRVVAL  108 (369)
Q Consensus        76 ~kkI~ILGSTG--SIGtqTLdVI~~~pd~F~VvaL  108 (369)
                      .|++.|.|+||  +||..+..-+.++  .++|+..
T Consensus         6 ~k~vlVtGas~~~giG~~~a~~l~~~--G~~vi~~   38 (256)
T PRK12859          6 NKVAVVTGVSRLDGIGAAICKELAEA--GADIFFT   38 (256)
T ss_pred             CcEEEEECCCCCCChHHHHHHHHHHC--CCeEEEE
Confidence            36899999995  8999999998886  4567664

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=85.11  E-value=9.9  Score=36.04  Aligned_cols=96  Identities=20%  Similarity=0.229  Sum_probs=56.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      .+|.|.|+ |++|..++.+.+.... -.|+++.  ++-++. +.++++..+.+.-..+..   +.+              
T Consensus       169 ~~VlI~g~-g~vg~~~iqlak~~g~-~~v~~~~--~~~~~~-~~~~~~g~~~vi~~~~~~---~~~--------------  226 (347)
T cd05278         169 STVAVIGA-GPVGLCAVAGARLLGA-ARIIAVD--SNPERL-DLAKEAGATDIINPKNGD---IVE--------------  226 (347)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCC-CEEEEEe--CCHHHH-HHHHHhCCcEEEcCCcch---HHH--------------
Confidence            57888765 9999999999997631 1455552  333333 455666544433222111   111              


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCcee
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~ia  196 (369)
                        .+.++.....+|.+++++.|-..+...+.+++.+-++.
T Consensus       227 --~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v  264 (347)
T cd05278         227 --QILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIA  264 (347)
T ss_pred             --HHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEE
Confidence              12222232458999998666467788888887776654

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=84.98  E-value=14  Score=35.10  Aligned_cols=93  Identities=14%  Similarity=0.192  Sum_probs=56.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      .+|.|.| +|++|..++.+.+..  .++|++.+..  -++ .+.++++..+.+.-..+..   +.               
T Consensus       161 ~~vLI~g-~g~vG~~a~~lA~~~--g~~v~~~~~s--~~~-~~~~~~~g~~~v~~~~~~~---~~---------------  216 (337)
T cd08261         161 DTVLVVG-AGPIGLGVIQVAKAR--GARVIVVDID--DER-LEFARELGADDTINVGDED---VA---------------  216 (337)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHc--CCeEEEECCC--HHH-HHHHHHhCCCEEecCcccC---HH---------------
Confidence            4789997 589999999999986  5778777543  233 3455667666554222111   11               


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCc
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~  194 (369)
                       +.+.+......+|++++.+.|-..+...+..++.+-+
T Consensus       217 -~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~  253 (337)
T cd08261         217 -ARLRELTDGEGADVVIDATGNPASMEEAVELVAHGGR  253 (337)
T ss_pred             -HHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcCCE
Confidence             1223333333478888886554556666666665433

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=84.96  E-value=2.4  Score=40.91  Aligned_cols=64  Identities=17%  Similarity=0.229  Sum_probs=41.0

Q ss_pred             EEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHH
Q 017567           80 SVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEAL  144 (369)
Q Consensus        80 ~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l  144 (369)
                      .|.|+||+||...++-+.++.+.++|.++.-..+...+. +...+.-......|=.+.+.+.+++
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~-~~~~~~~~~~~~~Di~d~~~l~~a~   64 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLK-DLQKSGVKEYIQGDITDPESLEEAL   64 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccch-hhhcccceeEEEeccccHHHHHHHh
Confidence            378999999999999999988778998887555443322 3344433323444444444454444

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PRK08303 short chain dehydrogenase; Provisional

Probab=84.95  E-value=9.8  Score=36.85  Aligned_cols=32  Identities=19%  Similarity=0.059  Sum_probs=26.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      .|.+.|.|+|+.||..+..-+.+.  .++|+.+.
T Consensus         8 ~k~~lITGgs~GIG~aia~~la~~--G~~Vv~~~   39 (305)
T PRK08303          8 GKVALVAGATRGAGRGIAVELGAA--GATVYVTG   39 (305)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEe
Confidence            368999999999999999998875  57777654

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=84.92  E-value=10  Score=35.08  Aligned_cols=95  Identities=19%  Similarity=0.236  Sum_probs=56.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceE-EEEEeecCCHHHHHHHHHhhCCCEEEEcCc-hhHHHHHHHHhcCCCCceE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFR-VVALAAGSNITLLADQVKRFKPQVVAVRNE-SLLDEIKEALANVEEKPEI  153 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~-VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de-~~~~~l~~~l~~~~~~~~v  153 (369)
                      ..+|.|.| +|++|..++++.++.  .++ |++.+  ++-+++ +.++++..+.+.-..+ +..+.              
T Consensus       130 ~~~vlI~g-~g~vg~~~~~la~~~--g~~~v~~~~--~~~~~~-~~~~~~g~~~~~~~~~~~~~~~--------------  189 (312)
T cd08269         130 GKTVAVIG-AGFIGLLFLQLAAAA--GARRVIAID--RRPARL-ALARELGATEVVTDDSEAIVER--------------  189 (312)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHc--CCcEEEEEC--CCHHHH-HHHHHhCCceEecCCCcCHHHH--------------
Confidence            35799997 689999999999987  566 55543  233343 3566666544432211 11122              


Q ss_pred             EecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCcee
Q 017567          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (369)
Q Consensus       154 ~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~ia  196 (369)
                            +.++.....+|.+++.+.+-..+...+..++.+-++.
T Consensus       190 ------l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~  226 (312)
T cd08269         190 ------VRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLV  226 (312)
T ss_pred             ------HHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEE
Confidence                  2333333458999998655456666777776654433

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=84.84  E-value=10  Score=35.65  Aligned_cols=94  Identities=17%  Similarity=0.164  Sum_probs=55.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh-hCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR-FKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~-FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .+|.|.|++|++|..+..+.++.  .++|++++  ++-+++ +.+++ +..+.+.-..+..   +.              
T Consensus       147 ~~vlI~g~~g~ig~~~~~~a~~~--G~~vi~~~--~~~~~~-~~~~~~~g~~~~~~~~~~~---~~--------------  204 (329)
T cd05288         147 ETVVVSAAAGAVGSVVGQIAKLL--GARVVGIA--GSDEKC-RWLVEELGFDAAINYKTPD---LA--------------  204 (329)
T ss_pred             CEEEEecCcchHHHHHHHHHHHc--CCEEEEEe--CCHHHH-HHHHhhcCCceEEecCChh---HH--------------
Confidence            58999999999999999999986  45776664  333333 23334 5544333222111   11              


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCcee
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~ia  196 (369)
                        +.+.++.. ..+|.+++...| ..+...+..++.+-++.
T Consensus       205 --~~v~~~~~-~~~d~vi~~~g~-~~~~~~~~~l~~~G~~v  241 (329)
T cd05288         205 --EALKEAAP-DGIDVYFDNVGG-EILDAALTLLNKGGRIA  241 (329)
T ss_pred             --HHHHHhcc-CCceEEEEcchH-HHHHHHHHhcCCCceEE
Confidence              12223332 358899986444 56777777776654443

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PRK12747 short chain dehydrogenase; Provisional

Probab=84.76  E-value=6.5  Score=35.78  Aligned_cols=43  Identities=21%  Similarity=0.159  Sum_probs=30.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQV  121 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~  121 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+. .++.+.+.+.+
T Consensus         4 ~k~~lItGas~gIG~~ia~~l~~~--G~~v~~~~-~~~~~~~~~~~   46 (252)
T PRK12747          4 GKVALVTGASRGIGRAIAKRLAND--GALVAIHY-GNRKEEAEETV   46 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC--CCeEEEEc-CCCHHHHHHHH
Confidence            368999999999999999999875  56665543 34444444433

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=84.72  E-value=15  Score=34.87  Aligned_cols=95  Identities=17%  Similarity=0.247  Sum_probs=60.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCc-hhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNE-SLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de-~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .+|.|.|++|++|..++.+.++.  .++|++++.  |-++. +.++++..+.+.-... ...+.+.              
T Consensus       167 ~~vlV~g~~~~vg~~~~~~a~~~--g~~v~~~~~--~~~~~-~~~~~~g~~~v~~~~~~~~~~~~~--------------  227 (341)
T cd08297         167 DWVVISGAGGGLGHLGVQYAKAM--GLRVIAIDV--GDEKL-ELAKELGADAFVDFKKSDDVEAVK--------------  227 (341)
T ss_pred             CEEEEECCCchHHHHHHHHHHHC--CCeEEEEeC--CHHHH-HHHHHcCCcEEEcCCCccHHHHHH--------------
Confidence            58999999999999999999987  457766653  33444 3446677655433221 1112222              


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCcee
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~ia  196 (369)
                            +......+|.|+++..+-..+...+.+++.+=++.
T Consensus       228 ------~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v  262 (341)
T cd08297         228 ------ELTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLV  262 (341)
T ss_pred             ------HHhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEE
Confidence                  22222358888886666667777777776654444

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=84.61  E-value=6.7  Score=35.22  Aligned_cols=40  Identities=20%  Similarity=0.230  Sum_probs=28.5

Q ss_pred             EEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHH
Q 017567           79 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQV  121 (369)
Q Consensus        79 I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~  121 (369)
                      |.|.|+||.||..+..-+.+.  .++|+.+ +.++.+.+.+..
T Consensus         1 vlItGas~giG~~~a~~l~~~--G~~v~~~-~~~~~~~~~~~~   40 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAAD--GFEICVH-YHSGRSDAESVV   40 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHC--CCEEEEE-eCCCHHHHHHHH
Confidence            579999999999999999876  5676544 444544444333

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PLN02686 cinnamoyl-CoA reductase

Probab=84.55  E-value=5.1  Score=39.76  Aligned_cols=34  Identities=18%  Similarity=0.307  Sum_probs=28.4

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        74 ~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      ...|+|.|.|+||+||....+-+.+.  .++|++++
T Consensus        51 ~~~k~VLVTGatGfIG~~lv~~L~~~--G~~V~~~~   84 (367)
T PLN02686         51 AEARLVCVTGGVSFLGLAIVDRLLRH--GYSVRIAV   84 (367)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHC--CCEEEEEe
Confidence            34578999999999999999988765  68888765

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=84.25  E-value=1.2  Score=42.05  Aligned_cols=31  Identities=19%  Similarity=0.377  Sum_probs=25.6

Q ss_pred             EEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 017567           79 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (369)
Q Consensus        79 I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (369)
                      |.|.|+||+||+...+.+.++  .++++++.-+
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~--g~~~v~~~~~   32 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDK--GITDILVVDN   32 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhC--CCceEEEecC
Confidence            789999999999999998876  5667776543

>TIGR00655 PurU formyltetrahydrofolate deformylase

Probab=84.22  E-value=10  Score=37.29  Aligned_cols=132  Identities=16%  Similarity=0.163  Sum_probs=80.7

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCC---ceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCc----h-hHHHHHHHHh
Q 017567           74 DGPKPISVLGSTGSIGTQTLDIVAEHED---KFRVVALAAGSNITLLADQVKRFKPQVVAVRNE----S-LLDEIKEALA  145 (369)
Q Consensus        74 ~~~kkI~ILGSTGSIGtqTLdVI~~~pd---~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de----~-~~~~l~~~l~  145 (369)
                      +.++||+||.|.+  |++.-+++.+..+   +.+|+++.+++  +.+...++++.-.+..+...    . .-.++-+.|.
T Consensus        82 ~~~~ki~vl~Sg~--g~nl~~l~~~~~~g~l~~~i~~visn~--~~~~~~A~~~gIp~~~~~~~~~~~~~~e~~~~~~l~  157 (280)
T TIGR00655        82 DKLKRVAILVSKE--DHCLGDLLWRWYSGELDAEIALVISNH--EDLRSLVERFGIPFHYIPATKDNRVEHEKRQLELLK  157 (280)
T ss_pred             CCCcEEEEEEcCC--ChhHHHHHHHHHcCCCCcEEEEEEEcC--hhHHHHHHHhCCCEEEcCCCCcchhhhHHHHHHHHH
Confidence            4578999999988  9999999887543   36888887654  33445688888777766431    1 1122333343


Q ss_pred             cCCCCceEEecHHHHH--HHhcCCCCCEEEEe----ccCccCcHHHHHHHHcCC-----ceeeecccceeecccchhH
Q 017567          146 NVEEKPEILAGEQGVI--EAARHPDAVTVVTG----IVGCAGLKPTVAAIEAGK-----DIALANKETLIAGGPFVLP  212 (369)
Q Consensus       146 ~~~~~~~v~~G~~gl~--~~~~~~~~D~Vv~A----IvG~aGL~pt~~Ai~~gK-----~iaLANKEsLV~aG~li~~  212 (369)
                      ..+.+.-|+.|---+.  ++.+..+. -++|-    +.-+-|..|...|+++|.     ++=..|.|  +-.|+.|.+
T Consensus       158 ~~~~Dlivlagym~il~~~~l~~~~~-~iINiHpSLLP~f~G~~p~~~ai~~G~k~tG~TvH~V~e~--lD~GpII~Q  232 (280)
T TIGR00655       158 QYQVDLVVLAKYMQILSPDFVKRYPN-KIINIHHSFLPAFIGANPYQRAYERGVKIIGATAHYVTEE--LDEGPIIEQ  232 (280)
T ss_pred             HhCCCEEEEeCchhhCCHHHHhhccC-CEEEecCCcCCCCCCcCHHHHHHHcCCCeEEEEEEEEcCC--CcCCCeEEE
Confidence            3334445555543221  12222211 23432    456889999999999995     45556655  467887754

This model describes formyltetrahydrofolate deformylases. The enzyme is a homohexamer. Sequences from a related enzyme formyl tetrahydrofolate-specific enzyme, phosphoribosylglycinamide formyltransferase, serve as an outgroup for phylogenetic analysis. Putative members of this family, scoring below the trusted cutoff, include a sequence from Rhodobacter capsulatus that lacks an otherwise conserved C-terminal region.

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=83.95  E-value=2.6  Score=43.77  Aligned_cols=92  Identities=25%  Similarity=0.394  Sum_probs=58.0

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEe-ecCCHHHHHHHHHhhCCC--------EEEEcCchhHHHHHHHHhcCC
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALA-AGSNITLLADQVKRFKPQ--------VVAVRNESLLDEIKEALANVE  148 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa-ag~Nv~lL~eQ~~~FkP~--------~V~v~de~~~~~l~~~l~~~~  148 (369)
                      -++|+||||+-|+-+.+-..+.. .|+-..++ ||+|-++|.+-.++-.-+        .+.++|-+             
T Consensus         7 DvVIyGASGfTG~yivee~v~~~-~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~-------------   72 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQ-VFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSA-------------   72 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhh-cccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCC-------------
Confidence            58999999999999888766532 56666664 689999998776654221        12222211             


Q ss_pred             CCceEEecHHHHHHHhcCCCCCEEEEeccC---ccCcHHHHHHHHcCC
Q 017567          149 EKPEILAGEQGVIEAARHPDAVTVVTGIVG---CAGLKPTVAAIEAGK  193 (369)
Q Consensus       149 ~~~~v~~G~~gl~~~~~~~~~D~Vv~AIvG---~aGL~pt~~Ai~~gK  193 (369)
                             .++.+.|||+.  +-+|||+ ||   +.|=.-..++|++|.
T Consensus        73 -------n~~Sl~emak~--~~vivN~-vGPyR~hGE~VVkacienG~  110 (423)
T KOG2733|consen   73 -------NEASLDEMAKQ--ARVIVNC-VGPYRFHGEPVVKACIENGT  110 (423)
T ss_pred             -------CHHHHHHHHhh--hEEEEec-cccceecCcHHHHHHHHcCC
Confidence                   24566667664  4456665 44   344445666777775

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=83.82  E-value=7.8  Score=35.83  Aligned_cols=43  Identities=23%  Similarity=0.366  Sum_probs=32.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      |+|+|.|. |.+|..+..-+.++  ..+|++  ...|.+.+.+...+|
T Consensus        29 k~v~I~G~-G~vG~~~A~~L~~~--G~~Vvv--~D~~~~~~~~~~~~~   71 (200)
T cd01075          29 KTVAVQGL-GKVGYKLAEHLLEE--GAKLIV--ADINEEAVARAAELF   71 (200)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHC--CCEEEE--EcCCHHHHHHHHHHc
Confidence            67999999 79999999988876  577873  456666665555544

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK08324 short chain dehydrogenase; Validated

Probab=83.81  E-value=8.2  Score=41.78  Aligned_cols=45  Identities=22%  Similarity=0.182  Sum_probs=34.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK  125 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~Fk  125 (369)
                      |++.|.|+||.||..+...+.+.  .++|+.+.  +|-+.+.+...++.
T Consensus       423 k~vLVTGasggIG~~la~~L~~~--Ga~Vvl~~--r~~~~~~~~~~~l~  467 (681)
T PRK08324        423 KVALVTGAAGGIGKATAKRLAAE--GACVVLAD--LDEEAAEAAAAELG  467 (681)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHC--cCEEEEEe--CCHHHHHHHHHHHh
Confidence            68999999999999999999876  46777654  45566655555544

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=83.80  E-value=14  Score=36.74  Aligned_cols=113  Identities=15%  Similarity=0.134  Sum_probs=64.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhH-HHHHHHHhc-CCCC-ceE
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLL-DEIKEALAN-VEEK-PEI  153 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~-~~l~~~l~~-~~~~-~~v  153 (369)
                      .+|.|.|++|.||..++.+.+.+  ..+++.++  .+-+++ +.++++...++.-.++... ..+.+.... .... .+.
T Consensus       191 ~~vlV~Ga~g~vG~~ai~~ak~~--G~~vi~~~--~~~~~~-~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (398)
T TIGR01751       191 DNVLIWGAAGGLGSYATQLARAG--GGNPVAVV--SSPEKA-EYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSF  265 (398)
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHc--CCeEEEEc--CCHHHH-HHHHHcCCCEEecCCCcchhhccccccccccchhhhcc
Confidence            58999999999999999999987  46676665  333443 5667787776653222110 001000000 0000 000


Q ss_pred             EecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCce
Q 017567          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (369)
Q Consensus       154 ~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~i  195 (369)
                      ..-.+.+.++.....+|.|++.. |...+..++.+++.+=++
T Consensus       266 ~~~~~~~~~~~~~~g~d~vld~~-g~~~~~~~~~~l~~~G~~  306 (398)
T TIGR01751       266 KRFGKRIRELTGGEDPDIVFEHP-GRATFPTSVFVCRRGGMV  306 (398)
T ss_pred             hhHHHHHHHHcCCCCceEEEECC-cHHHHHHHHHhhccCCEE
Confidence            11123444444445699999985 446677788887766443

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>PRK07856 short chain dehydrogenase; Provisional

Probab=83.64  E-value=8.8  Score=35.00  Aligned_cols=32  Identities=22%  Similarity=0.200  Sum_probs=26.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      .|++.|.|+||.||..+.+.+.+.  .++|+.+.
T Consensus         6 ~k~~lItGas~gIG~~la~~l~~~--g~~v~~~~   37 (252)
T PRK07856          6 GRVVLVTGGTRGIGAGIARAFLAA--GATVVVCG   37 (252)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEe
Confidence            378999999999999999998875  56776653

>PLN02780 ketoreductase/ oxidoreductase

Probab=83.49  E-value=7.5  Score=37.98  Aligned_cols=44  Identities=23%  Similarity=0.175  Sum_probs=33.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      +.+.|.|+||-||.....-+.+.  .++|+.+  .+|.+.|.+.+++.
T Consensus        54 ~~~lITGAs~GIG~alA~~La~~--G~~Vil~--~R~~~~l~~~~~~l   97 (320)
T PLN02780         54 SWALVTGPTDGIGKGFAFQLARK--GLNLVLV--ARNPDKLKDVSDSI   97 (320)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC--CCCEEEE--ECCHHHHHHHHHHH
Confidence            57999999999999999888875  5677664  35677766555443

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=83.45  E-value=8.2  Score=37.87  Aligned_cols=44  Identities=14%  Similarity=0.124  Sum_probs=31.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK  125 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~Fk  125 (369)
                      .+++.|+|. |-+|.++...++++.  .+|...  .++.+. .++++++.
T Consensus       152 g~kvlViG~-G~iG~~~a~~L~~~G--a~V~v~--~r~~~~-~~~~~~~G  195 (296)
T PRK08306        152 GSNVLVLGF-GRTGMTLARTLKALG--ANVTVG--ARKSAH-LARITEMG  195 (296)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCC--CEEEEE--ECCHHH-HHHHHHcC
Confidence            578999996 889999999999873  455553  445554 35566554

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=83.42  E-value=12  Score=35.60  Aligned_cols=96  Identities=18%  Similarity=0.164  Sum_probs=57.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceE-EEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFR-VVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~-VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      ..+|.|.| .|++|..++.+.++.  ..+ |++.+.  +-++. +..+++..+.+.-.++..   +              
T Consensus       166 g~~VlV~g-~g~vg~~~~~la~~~--g~~~v~~~~~--s~~~~-~~~~~~g~~~~~~~~~~~---~--------------  222 (343)
T cd08235         166 GDTVLVIG-AGPIGLLHAMLAKAS--GARKVIVSDL--NEFRL-EFAKKLGADYTIDAAEED---L--------------  222 (343)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHc--CCcEEEEECC--CHHHH-HHHHHhCCcEEecCCccC---H--------------
Confidence            35899997 589999999988876  345 554433  22332 233566665543322211   1              


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCcee
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~ia  196 (369)
                        .+.+.++.....+|.|++.+.|-..+...+.+++.+-++.
T Consensus       223 --~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v  262 (343)
T cd08235         223 --VEKVRELTDGRGADVVIVATGSPEAQAQALELVRKGGRIL  262 (343)
T ss_pred             --HHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEE
Confidence              1122333333458999998776667777888887765543

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=83.39  E-value=12  Score=37.65  Aligned_cols=97  Identities=16%  Similarity=0.204  Sum_probs=55.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      .+|.|.| +|.||..++.+.+..  ..+++. +...+-+++ ++++++....+....+...   .               
T Consensus       187 ~~VlV~G-~G~iG~~aiqlAk~~--Ga~~vi-~~d~~~~r~-~~a~~~Ga~~v~~~~~~~~---~---------------  243 (393)
T TIGR02819       187 STVYIAG-AGPVGLAAAASAQLL--GAAVVI-VGDLNPARL-AQARSFGCETVDLSKDATL---P---------------  243 (393)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHc--CCceEE-EeCCCHHHH-HHHHHcCCeEEecCCcccH---H---------------
Confidence            4788855 599999999998876  455544 333444443 5677787653221111111   1               


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCc--------------cCcHHHHHHHHcCCceee
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGC--------------AGLKPTVAAIEAGKDIAL  197 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~--------------aGL~pt~~Ai~~gK~iaL  197 (369)
                       +.+.++.....+|+|++++-+-              ..+.-.+.+++.|=+|.+
T Consensus       244 -~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~  297 (393)
T TIGR02819       244 -EQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGI  297 (393)
T ss_pred             -HHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEE
Confidence             1222222223589999975543              256667777777766543

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=83.28  E-value=7.2  Score=40.29  Aligned_cols=42  Identities=29%  Similarity=0.464  Sum_probs=31.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQV  121 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~  121 (369)
                      .|++.|.|+||.||....+-+.+.  .++|++++  +|.+.+.+..
T Consensus       178 gK~VLITGASgGIG~aLA~~La~~--G~~Vi~l~--r~~~~l~~~~  219 (406)
T PRK07424        178 GKTVAVTGASGTLGQALLKELHQQ--GAKVVALT--SNSDKITLEI  219 (406)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHH
Confidence            468999999999999999888765  57888765  3445554433

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=83.09  E-value=14  Score=34.74  Aligned_cols=91  Identities=9%  Similarity=0.077  Sum_probs=53.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      .+|.|.|++|.+|..++.+.+..  ..+|++.+  .+-+++ +.++++..+.+.-.++...                   
T Consensus       142 ~~vlI~g~~g~ig~~~~~lak~~--G~~v~~~~--~~~~~~-~~~~~~g~~~~~~~~~~~~-------------------  197 (327)
T PRK10754        142 EQFLFHAAAGGVGLIACQWAKAL--GAKLIGTV--GSAQKA-QRAKKAGAWQVINYREENI-------------------  197 (327)
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHc--CCEEEEEe--CCHHHH-HHHHHCCCCEEEcCCCCcH-------------------
Confidence            58999999999999999999987  45676654  233333 3346666655443222111                   


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcC
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~g  192 (369)
                      .+.+.++.....+|.+++.+.| ..+...+..++.+
T Consensus       198 ~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~  232 (327)
T PRK10754        198 VERVKEITGGKKVRVVYDSVGK-DTWEASLDCLQRR  232 (327)
T ss_pred             HHHHHHHcCCCCeEEEEECCcH-HHHHHHHHHhccC
Confidence            1122233332347888887544 4455555666544

>TIGR03025 EPS_sugtrans exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase

Probab=83.03  E-value=11  Score=38.35  Aligned_cols=60  Identities=15%  Similarity=0.307  Sum_probs=48.0

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCC-ceEEEEEeec--------------CCHHHHHHHHHhhCCCEEEEcCch
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHED-KFRVVALAAG--------------SNITLLADQVKRFKPQVVAVRNES  135 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd-~F~VvaLaag--------------~Nv~lL~eQ~~~FkP~~V~v~de~  135 (369)
                      ..+++.|+|+ |.-|.+.++-++++|+ .|+++|..-.              .+.+.+.+.+++.+.+.|.++.+.
T Consensus       124 ~~~rvLIvGa-g~~a~~l~~~L~~~~~~g~~vvG~idd~~~~~~~i~g~pVlg~~~~l~~~i~~~~id~ViIa~p~  198 (445)
T TIGR03025       124 NLRRVLIVGT-GEAARELAAALSRNPDLGYRVVGFVDDRPSDRVEVAGLPVLGKLDDLVELVRAHRVDEVIIALPL  198 (445)
T ss_pred             CCCcEEEEEC-CHHHHHHHHHHhhCccCCeEEEEEEeCCcccccccCCCcccCCHHHHHHHHHhCCCCEEEEecCc
Confidence            3468999996 7788999998888775 6999997542              256789999999999999887654

Certain closely related transferase enzymes such as Sinorhizobium ExoY and Lactococcus EpsD lack the N-terminal domain and are not found by this model.

>PRK06720 hypothetical protein; Provisional

Probab=83.00  E-value=15  Score=33.05  Aligned_cols=64  Identities=13%  Similarity=0.111  Sum_probs=38.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC--CHHHHHHHHHhhCCCEE-EEcCchhHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS--NITLLADQVKRFKPQVV-AVRNESLLDEIKE  142 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~--Nv~lL~eQ~~~FkP~~V-~v~de~~~~~l~~  142 (369)
                      .|.+.|.|++|.||......+.+.  .++|+... .+  +.+...++..+..++.. ...|-...+.+++
T Consensus        16 gk~~lVTGa~~GIG~aia~~l~~~--G~~V~l~~-r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~   82 (169)
T PRK06720         16 GKVAIVTGGGIGIGRNTALLLAKQ--GAKVIVTD-IDQESGQATVEEITNLGGEALFVSYDMEKQGDWQR   82 (169)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHC--CCEEEEEE-CCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHH
Confidence            468999999999999999988875  46665443 22  22333344444444433 2345444445544

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=82.86  E-value=13  Score=33.90  Aligned_cols=31  Identities=19%  Similarity=0.185  Sum_probs=25.5

Q ss_pred             eeEEEEecCC--hHhHHHHHHHHhCCCceEEEEEe
Q 017567           77 KPISVLGSTG--SIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        77 kkI~ILGSTG--SIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      |+|.|.|+||  .||.+...-+.+.  .++|+.+.
T Consensus         6 k~vlItGas~~~giG~~la~~l~~~--G~~vi~~~   38 (256)
T PRK12748          6 KIALVTGASRLNGIGAAVCRRLAAK--GIDIFFTY   38 (256)
T ss_pred             cEEEEeCCCCCCCHHHHHHHHHHHc--CCcEEEEc
Confidence            6899999996  6999999888876  57787664

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=82.84  E-value=13  Score=35.38  Aligned_cols=96  Identities=21%  Similarity=0.239  Sum_probs=58.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      .+|.|.| +|++|..++++.+..  .++|+.+...++-+++ +.++++..+.+ -..+..+   .               
T Consensus       166 ~~vlI~g-~g~~g~~~~~la~~~--G~~v~~~~~~~~~~~~-~~~~~~g~~~~-~~~~~~~---~---------------  222 (306)
T cd08258         166 DTVVVFG-PGPIGLLAAQVAKLQ--GATVVVVGTEKDEVRL-DVAKELGADAV-NGGEEDL---A---------------  222 (306)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHc--CCEEEEECCCCCHHHH-HHHHHhCCccc-CCCcCCH---H---------------
Confidence            5788855 799999999999987  4667665445554444 45566664433 1111111   1               


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCcee
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~ia  196 (369)
                       +.+.++.....+|.+++.+.+-..+...+..++.+-++.
T Consensus       223 -~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v  261 (306)
T cd08258         223 -ELVNEITDGDGADVVIECSGAVPALEQALELLRKGGRIV  261 (306)
T ss_pred             -HHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcCCEEE
Confidence             112222333458999998655566777777777665544

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>PRK13301 putative L-aspartate dehydrogenase; Provisional

Probab=82.83  E-value=7.6  Score=38.46  Aligned_cols=138  Identities=14%  Similarity=0.148  Sum_probs=83.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhC-CCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEH-EDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~-pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      +||+|+|. |.||+...+-+.+- .+.|+++++ ..++.++-.+.+..  ++  .+                        
T Consensus         3 ~rvgiIG~-GaIG~~va~~l~~~~~~~~~l~~V-~~~~~~~~~~~~~~--~~--~~------------------------   52 (267)
T PRK13301          3 HRIAFIGL-GAIASDVAAGLLADAAQPCQLAAL-TRNAADLPPALAGR--VA--LL------------------------   52 (267)
T ss_pred             eEEEEECc-cHHHHHHHHHHhcCCCCceEEEEE-ecCCHHHHHHhhcc--Cc--cc------------------------
Confidence            58999997 99999988877764 456999998 45555444333322  11  11                        


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeee------cccceeecccchhHHhhhcCCeEeecccchh
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALA------NKETLIAGGPFVLPLAHKHNIKILPADSEHS  229 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLA------NKEsLV~aG~li~~~a~k~~~~IlPVDSEHs  229 (369)
                        +.+.+++. .++|+||.+-+=-+=-+-....|++|+++.+.      +++..    .-+.+.|+++|.+|+--   .-
T Consensus        53 --~~l~~ll~-~~~DlVVE~A~~~av~e~~~~iL~~g~dlvv~SvGALaD~~~~----~~l~~~A~~~g~~i~ip---SG  122 (267)
T PRK13301         53 --DGLPGLLA-WRPDLVVEAAGQQAIAEHAEGCLTAGLDMIICSAGALADDALR----ARLIAAAEAGGARIRVP---AG  122 (267)
T ss_pred             --CCHHHHhh-cCCCEEEECCCHHHHHHHHHHHHhcCCCEEEEChhHhcCHHHH----HHHHHHHHhCCCEEEEe---Ch
Confidence              12334432 35888888744433334455677778887543      22211    12355778888777642   34


Q ss_pred             hH--HHhhcCCCCCccceEEEeecCCC
Q 017567          230 AI--FQCIQGLPEGALRRIILTASGGA  254 (369)
Q Consensus       230 AI--fQ~L~g~~~~~v~kiiLTASGGP  254 (369)
                      ||  ++.|+.-....+.++.+|.--.|
T Consensus       123 AigGlD~l~aa~~~~~~~v~~~t~K~P  149 (267)
T PRK13301        123 AIAGLDYLQAVAGRDDAEVVYESRKPV  149 (267)
T ss_pred             HHHhHHHHHHhhccCceEEEEEEecCh
Confidence            55  35666544556888888877666

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=82.77  E-value=14  Score=35.51  Aligned_cols=97  Identities=15%  Similarity=0.142  Sum_probs=54.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceE-EEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFR-VVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~-VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .+|.|.| .|++|..++.+.+...  .+ |++.+.  +-++ .++++++..+.+.-.++....++.+             
T Consensus       164 ~~vlI~g-~g~vG~~a~~lak~~G--~~~v~~~~~--~~~~-~~~~~~~g~~~vi~~~~~~~~~~~~-------------  224 (343)
T cd05285         164 DTVLVFG-AGPIGLLTAAVAKAFG--ATKVVVTDI--DPSR-LEFAKELGATHTVNVRTEDTPESAE-------------  224 (343)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHcC--CcEEEEECC--CHHH-HHHHHHcCCcEEeccccccchhHHH-------------
Confidence            5788876 5899999999999863  34 444432  2222 3455666655544332222111111             


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCce
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~i  195 (369)
                         .+.+......+|+|++.+.+-..+...+..++.+-++
T Consensus       225 ---~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~  261 (343)
T cd05285         225 ---KIAELLGGKGPDVVIECTGAESCIQTAIYATRPGGTV  261 (343)
T ss_pred             ---HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEE
Confidence               1222223335899999755444666677777765443

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK07634 pyrroline-5-carboxylate reductase; Reviewed

Probab=82.54  E-value=17  Score=33.43  Aligned_cols=49  Identities=14%  Similarity=0.287  Sum_probs=34.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCC-CceEEEEEeecCCHHHHHHHHHhhC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHE-DKFRVVALAAGSNITLLADQVKRFK  125 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~p-d~F~VvaLaag~Nv~lL~eQ~~~Fk  125 (369)
                      .+||+|+| +|.+|+.-..-+.++. ..++.+.+..++|.+.+.+..+++.
T Consensus         4 ~~kI~iIG-~G~mg~ala~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~   53 (245)
T PRK07634          4 KHRILFIG-AGRMAEAIFSGLLKTSKEYIEEIIVSNRSNVEKLDQLQARYN   53 (245)
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHhCCCCCcCeEEEECCCCHHHHHHHHHHcC
Confidence            35799999 6999998888776653 3454333445567788877777775

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=82.45  E-value=14  Score=36.39  Aligned_cols=111  Identities=15%  Similarity=0.180  Sum_probs=62.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchh-HHHHHHHHhcCCCCc----
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL-LDEIKEALANVEEKP----  151 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~-~~~l~~~l~~~~~~~----  151 (369)
                      .+|.|.|++|+||..++.+.+..  .+++++++  ++-+++ ++++++..+.+.-.++.. ...... + +.+...    
T Consensus       195 ~~vlV~ga~g~iG~a~~~lak~~--G~~vv~~~--~s~~~~-~~~~~~G~~~~i~~~~~~~~~~~~~-~-~~~~~~~~~~  267 (393)
T cd08246         195 DNVLIWGASGGLGSMAIQLARAA--GANPVAVV--SSEEKA-EYCRALGAEGVINRRDFDHWGVLPD-V-NSEAYTAWTK  267 (393)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHc--CCeEEEEe--CCHHHH-HHHHHcCCCEEEccccccccccccc-c-cchhhhhhhh
Confidence            48999999999999999999987  56677654  344554 566778766554322110 000000 0 000000    


Q ss_pred             eEEecHHHHHHHhcCC-CCCEEEEeccCccCcHHHHHHHHcCCce
Q 017567          152 EILAGEQGVIEAARHP-DAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (369)
Q Consensus       152 ~v~~G~~gl~~~~~~~-~~D~Vv~AIvG~aGL~pt~~Ai~~gK~i  195 (369)
                      ....-.+.+.++.... .+|+|++.. |...+...+..++.+=++
T Consensus       268 ~~~~~~~~v~~l~~~~~g~d~vid~~-g~~~~~~~~~~l~~~G~~  311 (393)
T cd08246         268 EARRFGKAIWDILGGREDPDIVFEHP-GRATFPTSVFVCDRGGMV  311 (393)
T ss_pred             ccchHHHHHHHHhCCCCCCeEEEECC-chHhHHHHHHHhccCCEE
Confidence            0000123455555444 699999984 446677777777665443

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]

Probab=82.40  E-value=11  Score=38.85  Aligned_cols=153  Identities=13%  Similarity=0.168  Sum_probs=99.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCC-CceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHE-DKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~p-d~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      +-|+.|+|+ |.|+.--+..+-.-| -+++|+|+++. ..+.-.+-++.++-.                      +++++
T Consensus         6 ~ir~Gi~g~-g~ia~~f~~al~~~p~s~~~Ivava~~-s~~~A~~fAq~~~~~----------------------~~k~y   61 (351)
T KOG2741|consen    6 TIRWGIVGA-GRIARDFVRALHTLPESNHQIVAVADP-SLERAKEFAQRHNIP----------------------NPKAY   61 (351)
T ss_pred             eeEEEEeeh-hHHHHHHHHHhccCcccCcEEEEEecc-cHHHHHHHHHhcCCC----------------------CCccc
Confidence            458999987 456655555555455 37999999988 456655555555421                      13343


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeec--ccchhHHhhhcCCeEe-ecccchhhH
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAG--GPFVLPLAHKHNIKIL-PADSEHSAI  231 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~a--G~li~~~a~k~~~~Il-PVDSEHsAI  231 (369)
                      .   +.+++++.+++|+|+.++-=.-=-+-..-++.+||-|.+ -|=.-...  -.-|.++|++.|+.+. =.=+-|+=.
T Consensus        62 ~---syEeLakd~~vDvVyi~~~~~qH~evv~l~l~~~K~VL~-EKPla~n~~e~~~iveaA~~rgv~~meg~~~R~~P~  137 (351)
T KOG2741|consen   62 G---SYEELAKDPEVDVVYISTPNPQHYEVVMLALNKGKHVLC-EKPLAMNVAEAEEIVEAAEARGVFFMEGLWWRFFPR  137 (351)
T ss_pred             c---CHHHHhcCCCcCEEEeCCCCccHHHHHHHHHHcCCcEEe-cccccCCHHHHHHHHHHHHHcCcEEEeeeeeecCcH
Confidence            2   567788999999999998777777778889999998543 22111111  1224567888886654 344455544


Q ss_pred             HHhhc----CCCCCccceEEEeecCCCCCC
Q 017567          232 FQCIQ----GLPEGALRRIILTASGGAFRD  257 (369)
Q Consensus       232 fQ~L~----g~~~~~v~kiiLTASGGPFr~  257 (369)
                      ++-|+    +..-.+|+.+.+ .=|+||+.
T Consensus       138 ~~~lke~l~~~~~Gdvk~v~~-~~~f~~~~  166 (351)
T KOG2741|consen  138 YAKLKELLSSGVLGDVKSVEV-EFGFPFPE  166 (351)
T ss_pred             HHHHHHHHhccccccceEEEE-ecCCCcch
Confidence            44443    445678999999 67788873

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=82.37  E-value=11  Score=35.18  Aligned_cols=65  Identities=12%  Similarity=0.056  Sum_probs=40.7

Q ss_pred             eeEEEEec--CChHhHHHHHHHHhCCCceEEEEEee-cCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHH
Q 017567           77 KPISVLGS--TGSIGTQTLDIVAEHEDKFRVVALAA-GSNITLLADQVKRFKPQVVAVRNESLLDEIKEA  143 (369)
Q Consensus        77 kkI~ILGS--TGSIGtqTLdVI~~~pd~F~VvaLaa-g~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~  143 (369)
                      |.+.|.|+  |+-||..+..-+.+.  .++|+...- .++.+.+.+..+++....+...|-.+.+.+++.
T Consensus         7 k~vlItGas~~~GIG~a~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   74 (260)
T PRK06997          7 KRILITGLLSNRSIAYGIAKACKRE--GAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDAL   74 (260)
T ss_pred             cEEEEeCCCCCCcHHHHHHHHHHHC--CCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHH
Confidence            68999996  567999998888775  466665421 245677766666664333333454444445443

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=82.32  E-value=14  Score=36.23  Aligned_cols=91  Identities=15%  Similarity=0.222  Sum_probs=58.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      .+|.|.| +|+||..++.+.+..  ..+|++++  ++-+++.+..+++..+.+....+.  ..+                
T Consensus       182 ~~vlV~G-~G~vG~~av~~Ak~~--G~~vi~~~--~~~~~~~~~~~~~Ga~~~i~~~~~--~~~----------------  238 (357)
T PLN02514        182 LRGGILG-LGGVGHMGVKIAKAM--GHHVTVIS--SSDKKREEALEHLGADDYLVSSDA--AEM----------------  238 (357)
T ss_pred             CeEEEEc-ccHHHHHHHHHHHHC--CCeEEEEe--CCHHHHHHHHHhcCCcEEecCCCh--HHH----------------
Confidence            4788997 599999999999987  45676654  344555556667776544322111  111                


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCcee
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~ia  196 (369)
                          .+..  ..+|.|++++-+...+...+.+++.|-++.
T Consensus       239 ----~~~~--~~~D~vid~~g~~~~~~~~~~~l~~~G~iv  272 (357)
T PLN02514        239 ----QEAA--DSLDYIIDTVPVFHPLEPYLSLLKLDGKLI  272 (357)
T ss_pred             ----HHhc--CCCcEEEECCCchHHHHHHHHHhccCCEEE
Confidence                1111  248999998655567777777777765543

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=82.12  E-value=15  Score=35.30  Aligned_cols=93  Identities=11%  Similarity=0.138  Sum_probs=56.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceE-EEEEeecCCHHHHHHHHHhhCCCEEEEcCch-hHHHHHHHHhcCCCCceEE
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFR-VVALAAGSNITLLADQVKRFKPQVVAVRNES-LLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~-VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~-~~~~l~~~l~~~~~~~~v~  154 (369)
                      .+|.| +++|++|..++.+.+..-  .. +++.  .++-+++ +.++++..+.+.-..+. ..++               
T Consensus       176 ~~vlI-~g~g~vG~~~~~~a~~~G--~~~v~~~--~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~---------------  234 (350)
T cd08256         176 DVVVL-AGAGPLGLGMIGAARLKN--PKKLIVL--DLKDERL-ALARKFGADVVLNPPEVDVVEK---------------  234 (350)
T ss_pred             CEEEE-ECCCHHHHHHHHHHHHcC--CcEEEEE--cCCHHHH-HHHHHcCCcEEecCCCcCHHHH---------------
Confidence            46777 667999999999998863  33 3332  3444554 46677766554322211 1122               


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCce
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~i  195 (369)
                           +.++.....+|++++.+.|-..+...+.+++.+-++
T Consensus       235 -----~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~  270 (350)
T cd08256         235 -----IKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRF  270 (350)
T ss_pred             -----HHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEE
Confidence                 222333335899999876556677788888776554

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>PLN02996 fatty acyl-CoA reductase

Probab=82.07  E-value=1.9  Score=45.10  Aligned_cols=37  Identities=19%  Similarity=0.172  Sum_probs=31.0

Q ss_pred             CCCeeEEEEecCChHhHHHHHH-HHhCCCceEEEEEee
Q 017567           74 DGPKPISVLGSTGSIGTQTLDI-VAEHEDKFRVVALAA  110 (369)
Q Consensus        74 ~~~kkI~ILGSTGSIGtqTLdV-I~~~pd~F~VvaLaa  110 (369)
                      =..|+|.|.|+||+||+-.++- ++..|+.-+|.+|.=
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR   46 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLR   46 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEe
Confidence            3457899999999999999976 566788888999884

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=81.99  E-value=15  Score=35.15  Aligned_cols=90  Identities=16%  Similarity=0.241  Sum_probs=54.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      .+|.|+| +|+||..+..+.+..  .++|++++.  +-+.+ +.++++..+++.-..+..   +.+              
T Consensus       165 ~~vlV~g-~g~iG~~~~~~a~~~--G~~vi~~~~--~~~~~-~~~~~~g~~~~i~~~~~~---~~~--------------  221 (333)
T cd08296         165 DLVAVQG-IGGLGHLAVQYAAKM--GFRTVAISR--GSDKA-DLARKLGAHHYIDTSKED---VAE--------------  221 (333)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHHC--CCeEEEEeC--ChHHH-HHHHHcCCcEEecCCCcc---HHH--------------
Confidence            5899999 899999999999986  456766543  44444 345777766554322211   111              


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCc
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~  194 (369)
                        .+.++   ..+|.++++..+-..+...+.+++.+=+
T Consensus       222 --~~~~~---~~~d~vi~~~g~~~~~~~~~~~l~~~G~  254 (333)
T cd08296         222 --ALQEL---GGAKLILATAPNAKAISALVGGLAPRGK  254 (333)
T ss_pred             --HHHhc---CCCCEEEECCCchHHHHHHHHHcccCCE
Confidence              11111   2478888875434556666666665543

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=81.81  E-value=13  Score=34.53  Aligned_cols=65  Identities=14%  Similarity=0.041  Sum_probs=37.2

Q ss_pred             eeEEEEecC--ChHhHHHHHHHHhCCCceEEEEEee----cCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHH
Q 017567           77 KPISVLGST--GSIGTQTLDIVAEHEDKFRVVALAA----GSNITLLADQVKRFKPQVVAVRNESLLDEIKEA  143 (369)
Q Consensus        77 kkI~ILGST--GSIGtqTLdVI~~~pd~F~VvaLaa----g~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~  143 (369)
                      |.+.|.|+|  +-||..+-.-+.+.  .++|+...-    .++.+.+.+...+..+-.+...|-.+.+.+++.
T Consensus         7 k~~lItGas~~~GIG~aia~~la~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~   77 (258)
T PRK07370          7 KKALVTGIANNRSIAWGIAQQLHAA--GAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEET   77 (258)
T ss_pred             cEEEEeCCCCCCchHHHHHHHHHHC--CCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHH
Confidence            689999987  67999999888875  566654321    133344443333333222333454444444443

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=81.61  E-value=17  Score=35.58  Aligned_cols=93  Identities=16%  Similarity=0.143  Sum_probs=55.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceE-EEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFR-VVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~-VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      ++|.|.|+ |++|..++.+.+..  .++ |++..  ++-+++ +.++++..+.+.-.++...   .              
T Consensus       188 ~~vlI~g~-g~vG~~~~~la~~~--G~~~v~~~~--~~~~k~-~~~~~~g~~~~i~~~~~~~---~--------------  244 (365)
T cd08278         188 SSIAVFGA-GAVGLAAVMAAKIA--GCTTIIAVD--IVDSRL-ELAKELGATHVINPKEEDL---V--------------  244 (365)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHc--CCCeEEEEe--CCHHHH-HHHHHcCCcEEecCCCcCH---H--------------
Confidence            58999975 99999999999987  343 44433  233444 4567777665543322111   1              


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCce
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~i  195 (369)
                        +.+.++. ...+|.|++++-+-..+...+..++.+-++
T Consensus       245 --~~v~~~~-~~~~d~vld~~g~~~~~~~~~~~l~~~G~~  281 (365)
T cd08278         245 --AAIREIT-GGGVDYALDTTGVPAVIEQAVDALAPRGTL  281 (365)
T ss_pred             --HHHHHHh-CCCCcEEEECCCCcHHHHHHHHHhccCCEE
Confidence              1122333 335899999864444556666666655443

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=81.49  E-value=17  Score=33.70  Aligned_cols=64  Identities=8%  Similarity=-0.014  Sum_probs=38.2

Q ss_pred             eeEEEEecC--ChHhHHHHHHHHhCCCceEEEEEeecCC--HHHHHHHHHhhCCCEEEEcCchhHHHHHHH
Q 017567           77 KPISVLGST--GSIGTQTLDIVAEHEDKFRVVALAAGSN--ITLLADQVKRFKPQVVAVRNESLLDEIKEA  143 (369)
Q Consensus        77 kkI~ILGST--GSIGtqTLdVI~~~pd~F~VvaLaag~N--v~lL~eQ~~~FkP~~V~v~de~~~~~l~~~  143 (369)
                      |.+.|.|++  +-||..+..-+.+.  .++|+.. +.+.  .+.+.+..+++....+.-.|-.+.+.+++.
T Consensus        11 k~~lItGas~g~GIG~a~a~~la~~--G~~v~l~-~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   78 (258)
T PRK07533         11 KRGLVVGIANEQSIAWGCARAFRAL--GAELAVT-YLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAV   78 (258)
T ss_pred             CEEEEECCCCCCcHHHHHHHHHHHc--CCEEEEE-eCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHH
Confidence            689999988  48999999998875  5666543 3321  233555555554223333454444444443

>PLN03096 glyceraldehyde-3-phosphate dehydrogenase A; Provisional

Probab=81.43  E-value=13  Score=38.81  Aligned_cols=112  Identities=15%  Similarity=0.214  Sum_probs=64.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCC-CceEEEEEeecCCHHHHHHHHH------hhCCCEEEEcCchhHHHHHHHHhcCCC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHE-DKFRVVALAAGSNITLLADQVK------RFKPQVVAVRNESLLDEIKEALANVEE  149 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~p-d~F~VvaLaag~Nv~lL~eQ~~------~FkP~~V~v~de~~~~~l~~~l~~~~~  149 (369)
                      .||+|.|. |=||+..|+++.+.+ ..++|+++---...+.++.+.+      .|+.+. ...++..       +.-.+.
T Consensus        61 ~kVaInGf-GrIGR~vlr~l~~~~~~~~evvaINd~~~~~~~ayLl~yDS~hG~f~~~v-~~~~g~~-------l~v~gk  131 (395)
T PLN03096         61 IKVAINGF-GRIGRNFLRCWHGRKDSPLDVVAINDTGGVKQASHLLKYDSTLGTFDADV-KPVGDDA-------ISVDGK  131 (395)
T ss_pred             cEEEEECc-CHHHHHHHHHHHhCCCCCeEEEEEcCCCCHHHHHHHHhhcccCCCcCCcE-EEecCCE-------EEECCE
Confidence            48999999 999999999987653 4689998865455666654443      222211 1111100       110112


Q ss_pred             CceEEecHHHHHHHh-cCCCCCEEEEeccCccCcHHHHHHHHcC-Cceeee
Q 017567          150 KPEILAGEQGVIEAA-RHPDAVTVVTGIVGCAGLKPTVAAIEAG-KDIALA  198 (369)
Q Consensus       150 ~~~v~~G~~gl~~~~-~~~~~D~Vv~AIvG~aGL~pt~~Ai~~g-K~iaLA  198 (369)
                      .+.++. +....++- ...++|+|+.+--.+.--.-.-.++++| |+|-+.
T Consensus       132 ~I~v~~-~~dp~~~~w~~~gvDiVie~TG~f~s~~~a~~hl~aGAkkV~iS  181 (395)
T PLN03096        132 VIKVVS-DRNPLNLPWGELGIDLVIEGTGVFVDREGAGKHIQAGAKKVLIT  181 (395)
T ss_pred             EEEEEE-cCCcccccccccCCCEEEECcchhhhHHHHHHHHHCCCEEEEeC
Confidence            233432 12222221 2247999999865565555556688888 555554

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=81.38  E-value=14  Score=33.62  Aligned_cols=93  Identities=15%  Similarity=0.211  Sum_probs=53.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      .+|.|.|++|.+|..+..+.+..  ..+|+..+-..  +. .+.++++....+.-..+..   +                
T Consensus       141 ~~vli~g~~~~~g~~~~~~a~~~--g~~v~~~~~~~--~~-~~~~~~~g~~~~~~~~~~~---~----------------  196 (323)
T cd08241         141 ETVLVLGAAGGVGLAAVQLAKAL--GARVIAAASSE--EK-LALARALGADHVIDYRDPD---L----------------  196 (323)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHh--CCEEEEEeCCH--HH-HHHHHHcCCceeeecCCcc---H----------------
Confidence            58999999999999999999876  45566654332  22 2233445433322111111   1                


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCc
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~  194 (369)
                      .+.+.++.....+|.+++.+.| ..+...+.+++.+-+
T Consensus       197 ~~~i~~~~~~~~~d~v~~~~g~-~~~~~~~~~~~~~g~  233 (323)
T cd08241         197 RERVKALTGGRGVDVVYDPVGG-DVFEASLRSLAWGGR  233 (323)
T ss_pred             HHHHHHHcCCCCcEEEEECccH-HHHHHHHHhhccCCE
Confidence            1122333333458999987655 666666666655433

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=81.35  E-value=17  Score=35.59  Aligned_cols=92  Identities=13%  Similarity=0.198  Sum_probs=56.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      ..+|.|+|+ |+||..++.+.+..  .. +|+++.  .+-+++ +.++++..+.+.-..+.. +.+.+            
T Consensus       187 g~~VlV~G~-G~vG~~a~~~ak~~--G~~~vi~~~--~~~~~~-~~~~~lGa~~~i~~~~~~-~~~~~------------  247 (368)
T cd08300         187 GSTVAVFGL-GAVGLAVIQGAKAA--GASRIIGID--INPDKF-ELAKKFGATDCVNPKDHD-KPIQQ------------  247 (368)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCCeEEEEe--CCHHHH-HHHHHcCCCEEEcccccc-hHHHH------------
Confidence            358999985 99999999999986  34 465554  344454 356778776654222110 01111            


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHc
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEA  191 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~  191 (369)
                          .+.++... .+|.|++++-+...+.-.+.+++.
T Consensus       248 ----~v~~~~~~-g~d~vid~~g~~~~~~~a~~~l~~  279 (368)
T cd08300         248 ----VLVEMTDG-GVDYTFECIGNVKVMRAALEACHK  279 (368)
T ss_pred             ----HHHHHhCC-CCcEEEECCCChHHHHHHHHhhcc
Confidence                12222222 589999986665677777777754

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=81.28  E-value=4  Score=46.83  Aligned_cols=40  Identities=23%  Similarity=0.375  Sum_probs=32.6

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCC--CceEEEEEeecCC
Q 017567           74 DGPKPISVLGSTGSIGTQTLDIVAEHE--DKFRVVALAAGSN  113 (369)
Q Consensus        74 ~~~kkI~ILGSTGSIGtqTLdVI~~~p--d~F~VvaLaag~N  113 (369)
                      ..+++|.|.|+||+||...++-+.+.+  ..++|+++.-..+
T Consensus       969 ~~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~ 1010 (1389)
T TIGR03443       969 STPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKS 1010 (1389)
T ss_pred             CCCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCC
Confidence            346789999999999999998877765  5789999876433

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=81.08  E-value=17  Score=34.54  Aligned_cols=90  Identities=13%  Similarity=0.204  Sum_probs=52.4

Q ss_pred             eeEEEE-ecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchh-HHHHHHHHhcCCCCceEE
Q 017567           77 KPISVL-GSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL-LDEIKEALANVEEKPEIL  154 (369)
Q Consensus        77 kkI~IL-GSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~-~~~l~~~l~~~~~~~~v~  154 (369)
                      .++.|. |++|++|..++.+.+..  ..+|++.+.  +-++ .+.++++..+.+.-.++.. .+.               
T Consensus       144 ~~vlv~~~g~g~vG~~a~q~a~~~--G~~vi~~~~--~~~~-~~~~~~~g~~~~i~~~~~~~~~~---------------  203 (324)
T cd08291         144 AKAVVHTAAASALGRMLVRLCKAD--GIKVINIVR--RKEQ-VDLLKKIGAEYVLNSSDPDFLED---------------  203 (324)
T ss_pred             CcEEEEccCccHHHHHHHHHHHHc--CCEEEEEeC--CHHH-HHHHHHcCCcEEEECCCccHHHH---------------
Confidence            356666 99999999999998876  456776543  3334 3455677766655433211 112               


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcC
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~g  192 (369)
                           +.++.....+|+|++++.| ......+.+++.|
T Consensus       204 -----v~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~  235 (324)
T cd08291         204 -----LKELIAKLNATIFFDAVGG-GLTGQILLAMPYG  235 (324)
T ss_pred             -----HHHHhCCCCCcEEEECCCc-HHHHHHHHhhCCC
Confidence                 2223332358899987544 3334445555444

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PRK05599 hypothetical protein; Provisional

Probab=80.87  E-value=16  Score=33.61  Aligned_cols=43  Identities=19%  Similarity=0.187  Sum_probs=30.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      |.+.|.|+|+-||.....-+.+   .++|+.++  +|.+.+.+.+++.
T Consensus         1 ~~vlItGas~GIG~aia~~l~~---g~~Vil~~--r~~~~~~~~~~~l   43 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLCH---GEDVVLAA--RRPEAAQGLASDL   43 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHhC---CCEEEEEe--CCHHHHHHHHHHH
Confidence            4689999999999999887763   57776543  4566665554444

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=80.84  E-value=23  Score=33.00  Aligned_cols=91  Identities=22%  Similarity=0.269  Sum_probs=55.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      .+|.|.|++|++|..++.+.+..  ..+|+..+.  +-+++ +.++++..+.+.-.++  ..  .               
T Consensus       148 ~~vlI~g~~g~vg~~~~~~a~~~--g~~v~~~~~--~~~~~-~~~~~~g~~~~~~~~~--~~--~---------------  203 (325)
T cd05280         148 GPVLVTGATGGVGSIAVAILAKL--GYTVVALTG--KEEQA-DYLKSLGASEVLDRED--LL--D---------------  203 (325)
T ss_pred             CEEEEECCccHHHHHHHHHHHHc--CCEEEEEeC--CHHHH-HHHHhcCCcEEEcchh--HH--H---------------
Confidence            47999999999999999998876  345655543  33443 3446676655532211  10  0               


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCc
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~  194 (369)
                        .+.+......+|.|++...| ..+...+.++..+-+
T Consensus       204 --~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~g~  238 (325)
T cd05280         204 --ESKKPLLKARWAGAIDTVGG-DVLANLLKQTKYGGV  238 (325)
T ss_pred             --HHHHHhcCCCccEEEECCch-HHHHHHHHhhcCCCE
Confidence              01111222348999988665 677777877765433

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=80.78  E-value=1.5  Score=43.70  Aligned_cols=44  Identities=20%  Similarity=0.319  Sum_probs=31.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCC-----CceEEEEEeecCCHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHE-----DKFRVVALAAGSNITLLAD  119 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~p-----d~F~VvaLaag~Nv~lL~e  119 (369)
                      |-||+|.|+||+||.+...-+...+     +.++|+.+--..+.+++..
T Consensus         2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g   50 (325)
T cd01336           2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEG   50 (325)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccc
Confidence            5689999999999999888776543     2358888766555444433

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=80.70  E-value=10  Score=37.28  Aligned_cols=91  Identities=13%  Similarity=0.272  Sum_probs=56.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      ++|.|.|+ |.||..++.+.+..  ..+|++++.  +-++..+.++++..+.+.-..+  .+.+                
T Consensus       185 ~~VlV~G~-G~vG~~avq~Ak~~--Ga~vi~~~~--~~~~~~~~~~~~Ga~~vi~~~~--~~~~----------------  241 (360)
T PLN02586        185 KHLGVAGL-GGLGHVAVKIGKAF--GLKVTVISS--SSNKEDEAINRLGADSFLVSTD--PEKM----------------  241 (360)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHC--CCEEEEEeC--CcchhhhHHHhCCCcEEEcCCC--HHHH----------------
Confidence            47888776 99999999999987  456766543  2345556677787765542211  1111                


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCcee
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~ia  196 (369)
                          .++.  ..+|+|+++..+...+...+..++.|=++.
T Consensus       242 ----~~~~--~~~D~vid~~g~~~~~~~~~~~l~~~G~iv  275 (360)
T PLN02586        242 ----KAAI--GTMDYIIDTVSAVHALGPLLGLLKVNGKLI  275 (360)
T ss_pred             ----Hhhc--CCCCEEEECCCCHHHHHHHHHHhcCCcEEE
Confidence                1111  147999998554344666677776665543

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=80.69  E-value=11  Score=41.11  Aligned_cols=44  Identities=23%  Similarity=0.243  Sum_probs=32.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      |++.|.|+||.||..+..-+.+.  .++|+.+.  +|.+.+.+...++
T Consensus       415 kvvLVTGasggIG~aiA~~La~~--Ga~Vvi~~--r~~~~~~~~~~~l  458 (676)
T TIGR02632       415 RVAFVTGGAGGIGRETARRLAAE--GAHVVLAD--LNLEAAEAVAAEI  458 (676)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEe--CCHHHHHHHHHHH
Confidence            68999999999999999988875  56777664  4555555444443

>TIGR02130 dapB_plant dihydrodipicolinate reductase

Probab=80.56  E-value=12  Score=37.07  Aligned_cols=29  Identities=21%  Similarity=0.373  Sum_probs=26.7

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEE
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVAL  108 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaL  108 (369)
                      ||+|.|+||-.|+.+.+-+.+  +.|++|+.
T Consensus         2 ~V~V~Ga~GkMG~~v~~av~~--~~~~Lv~~   30 (275)
T TIGR02130         2 QIMVNGCPGKMGKAVAEAADA--AGLEIVPT   30 (275)
T ss_pred             eEEEeCCCChHHHHHHHHHhc--CCCEEEee
Confidence            799999999999999999988  46999996

This narrow family includes genes from Arabidopsis and Fibrobacter succinogenes (which probably recieved the gene from a plant via lateral gene transfer). The sequences are distantly related to the dihydrodipicolinate reductases from archaea. In Fibrobacter this gene is the only candidate DHPR in the genome.

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=80.48  E-value=13  Score=38.55  Aligned_cols=154  Identities=19%  Similarity=0.209  Sum_probs=103.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      +.-+.|.|+||+.|.=+.+-+.+.-.+    +.-|++|.++|-....++.|+....                +    +..
T Consensus         6 e~d~iiYGAtGy~G~lvae~l~~~g~~----~aLAgRs~~kl~~l~~~LG~~~~~~----------------p----~~~   61 (382)
T COG3268           6 EYDIIIYGATGYAGGLVAEYLAREGLT----AALAGRSSAKLDALRASLGPEAAVF----------------P----LGV   61 (382)
T ss_pred             ceeEEEEccccchhHHHHHHHHHcCCc----hhhccCCHHHHHHHHHhcCcccccc----------------C----CCC
Confidence            347999999999999999888875333    3456789999999998888876442                1    111


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccC---ccCcHHHHHHHHcCCceeeecccceeeccc--chhHHhhhcCCeEeec---ccc
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVG---CAGLKPTVAAIEAGKDIALANKETLIAGGP--FVLPLAHKHNIKILPA---DSE  227 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG---~aGL~pt~~Ai~~gK~iaLANKEsLV~aG~--li~~~a~k~~~~IlPV---DSE  227 (369)
                       +.++.++++.  +++|+|- ||   -.|+.-.-+++.+|-+-+=-.-|..++==.  +--+.|++.|+.|+|-   ||=
T Consensus        62 -p~~~~~~~~~--~~VVlnc-vGPyt~~g~plv~aC~~~GTdY~DiTGEi~~fe~~i~~yh~~A~~~Ga~Ii~~cGFDsI  137 (382)
T COG3268          62 -PAALEAMASR--TQVVLNC-VGPYTRYGEPLVAACAAAGTDYADITGEIMFFENSIDLYHAQAADAGARIIPGCGFDSI  137 (382)
T ss_pred             -HHHHHHHHhc--ceEEEec-cccccccccHHHHHHHHhCCCeeeccccHHHHHHHHHHHHHHHHhcCCEEeccCCCCcC
Confidence             6778888864  7788876 44   246666677889998877777777665311  1134677889999884   766


Q ss_pred             hhh--HHHhhcCCCCC------ccceEEEeecCCCCCC
Q 017567          228 HSA--IFQCIQGLPEG------ALRRIILTASGGAFRD  257 (369)
Q Consensus       228 HsA--IfQ~L~g~~~~------~v~kiiLTASGGPFr~  257 (369)
                      -+-  +++|++-..+.      ..+-++..-+|+-+-.
T Consensus       138 PsDl~v~~l~~~~~~d~~~~~~~t~l~l~s~t~~g~S~  175 (382)
T COG3268         138 PSDLGVYALLKQALPDGTEELIATHLALGSFTGSGISG  175 (382)
T ss_pred             ccchHHHHHHHhhCcccccchhhhheeeeecccCCccc
Confidence            554  47877754444      3344455555543333

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=80.38  E-value=18  Score=34.02  Aligned_cols=97  Identities=14%  Similarity=0.165  Sum_probs=60.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      ..+|.|.|++|++|..++.+.+..- ..+|++.+...  +.+ +.++++..+.+.-..+ .   +.+.            
T Consensus       150 g~~vlV~g~~g~vg~~~~~~a~~~G-~~~v~~~~~~~--~~~-~~~~~~g~~~~~~~~~-~---~~~~------------  209 (336)
T cd08252         150 GKTLLIIGGAGGVGSIAIQLAKQLT-GLTVIATASRP--ESI-AWVKELGADHVINHHQ-D---LAEQ------------  209 (336)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHcC-CcEEEEEcCCh--hhH-HHHHhcCCcEEEeCCc-c---HHHH------------
Confidence            3589999999999999999998862 16777765432  222 3346677655432111 1   1111            


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceee
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIAL  197 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaL  197 (369)
                          +... ....+|.+++.+.|-..+...+.+++.+-++..
T Consensus       210 ----i~~~-~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~  246 (336)
T cd08252         210 ----LEAL-GIEPVDYIFCLTDTDQHWDAMAELIAPQGHICL  246 (336)
T ss_pred             ----HHhh-CCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEE
Confidence                1111 123589999887666677888888877655443

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>PF07287 DUF1446: Protein of unknown function (DUF1446); InterPro: IPR010839 This family consists of several bacterial and plant proteins of around 400 residues in length

Probab=80.36  E-value=7.2  Score=40.05  Aligned_cols=101  Identities=32%  Similarity=0.378  Sum_probs=61.9

Q ss_pred             HHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh------CCCEEEEcCchhHHHHHHHHhcCCCCceEEecHHHHHHHh
Q 017567           91 QTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF------KPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAA  164 (369)
Q Consensus        91 qTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F------kP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G~~gl~~~~  164 (369)
                      +.|..++++  +.+|+.=+++.|-.-+++.+++.      +.+.++|..+...+.+++.+.. +..+.-+...+-+.+. 
T Consensus        62 ~~L~~~~~~--gIkvI~NaGg~np~~~a~~v~eia~e~Gl~lkvA~V~gDd~~~~v~~~~~~-g~~~~~l~~~~~l~~~-  137 (362)
T PF07287_consen   62 PLLPAAAEK--GIKVITNAGGLNPAGCADIVREIARELGLSLKVAVVYGDDLKDEVKELLAE-GETIRPLDTGPPLSEW-  137 (362)
T ss_pred             HHHHHHHhC--CCCEEEeCCCCCHHHHHHHHHHHHHhcCCCeeEEEEECccchHhHHHHHhC-CCCCccCCCCCCcchh-
Confidence            566666665  66677767777876666665542      4577777777777777766542 1111111111112111 


Q ss_pred             cCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecc
Q 017567          165 RHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANK  200 (369)
Q Consensus       165 ~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANK  200 (369)
                         ..+  +..++...|-.|..+||+.|-+|-++=.
T Consensus       138 ---~~~--~~~a~aylGa~pI~~AL~~GADIVI~GR  168 (362)
T PF07287_consen  138 ---DDR--IVSANAYLGAEPIVEALEAGADIVITGR  168 (362)
T ss_pred             ---ccc--cceEEEecChHHHHHHHHcCCCEEEeCc
Confidence               111  5577889999999999999988766543

The function of this family is unknown.

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=80.32  E-value=17  Score=34.23  Aligned_cols=64  Identities=11%  Similarity=-0.051  Sum_probs=38.8

Q ss_pred             CeeEEEEecC--ChHhHHHHHHHHhCCCceEEEEEeecC--CHHHHHHHHHhhCCCEEEEcCchhHHHHHH
Q 017567           76 PKPISVLGST--GSIGTQTLDIVAEHEDKFRVVALAAGS--NITLLADQVKRFKPQVVAVRNESLLDEIKE  142 (369)
Q Consensus        76 ~kkI~ILGST--GSIGtqTLdVI~~~pd~F~VvaLaag~--Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~  142 (369)
                      .|.+.|.|++  +-||..+-+.+.+.  .++|+. ++++  +.+.+.+..+++.-......|-.+.+.+++
T Consensus        10 ~k~~lItGas~~~GIG~aia~~la~~--G~~V~l-~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~   77 (272)
T PRK08159         10 GKRGLILGVANNRSIAWGIAKACRAA--GAELAF-TYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDA   77 (272)
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHC--CCEEEE-EcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHH
Confidence            3689999997  66999999888875  677754 4432  235555555554322333344444444443

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=80.23  E-value=17  Score=34.54  Aligned_cols=92  Identities=18%  Similarity=0.247  Sum_probs=53.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .+|.|.| +|++|..++.+.+..  .+ +|++..  ++-++. +.++++.-..+...+++..                  
T Consensus       169 ~~vlI~g-~g~vg~~~~~~a~~~--g~~~v~~~~--~~~~~~-~~~~~~g~~~~~~~~~~~~------------------  224 (344)
T cd08284         169 DTVAVIG-CGPVGLCAVLSAQVL--GAARVFAVD--PVPERL-ERAAALGAEPINFEDAEPV------------------  224 (344)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHHc--CCceEEEEc--CCHHHH-HHHHHhCCeEEecCCcCHH------------------
Confidence            6899997 799999999999986  44 566652  233333 3345555322111111111                  


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCc
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~  194 (369)
                        +.+.++.....+|+++++..+-..+...+..++.+-+
T Consensus       225 --~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~  261 (344)
T cd08284         225 --ERVREATEGRGADVVLEAVGGAAALDLAFDLVRPGGV  261 (344)
T ss_pred             --HHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCE
Confidence              1223333334589999987665667777777765543

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>PRK05472 redox-sensing transcriptional repressor Rex; Provisional

Probab=80.06  E-value=11  Score=34.75  Aligned_cols=62  Identities=19%  Similarity=0.267  Sum_probs=42.6

Q ss_pred             CCCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC--------------CHHHHHHHHHhhCCCEEEEcCc
Q 017567           72 TWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS--------------NITLLADQVKRFKPQVVAVRNE  134 (369)
Q Consensus        72 ~~~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~--------------Nv~lL~eQ~~~FkP~~V~v~de  134 (369)
                      .+...++|+|+|+ |.+|....+........|+++|+....              ..+.+.+.+++.+++.|.++-+
T Consensus        80 ~~~~~~rV~IIGa-G~iG~~l~~~~~~~~~g~~ivgv~D~d~~~~~~~i~g~~v~~~~~l~~li~~~~iD~ViIa~P  155 (213)
T PRK05472         80 GLDRTWNVALVGA-GNLGRALLNYNGFEKRGFKIVAAFDVDPEKIGTKIGGIPVYHIDELEEVVKENDIEIGILTVP  155 (213)
T ss_pred             CCCCCcEEEEECC-CHHHHHHHHhhhcccCCcEEEEEEECChhhcCCEeCCeEEcCHHHHHHHHHHCCCCEEEEeCC
Confidence            4455678999995 889998877644323469999985321              2456667777777777777654

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=80.02  E-value=11  Score=36.37  Aligned_cols=30  Identities=27%  Similarity=0.443  Sum_probs=23.4

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEE
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVAL  108 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaL  108 (369)
                      ||.|.|+||.||.+..+-+.+...+ .|+++
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~-~v~~~   31 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQD-SVVNV   31 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCC-eEEEe
Confidence            6999999999999999999875322 34444

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	369
1q0l_A	406	Crystal Structure Of Dxr In Complex With Fosmidomyc		4e-64
3r0i_A	410	Ispc In Complex With An N-Methyl-Substituted Hydrox		1e-63
3anl_A	420	Crystal Structure Of 1-Deoxy-D-Xylulose 5-Phosphate		1e-63
1t1r_A	398	Crystal Structure Of The Reductoisomerase Complexed		1e-63
1k5h_A	398	1-Deoxy-D-Xylulose-5-Phosphate Reductoisomerase Len		1e-63
2egh_A	424	Crystal Structure Of 1-Deoxy-D-Xylulose 5-Phosphate		1e-63
1r0k_A	388	Crystal Structure Of 1-Deoxy-D-Xylulose 5-Phosphate		3e-63
3au8_A	488	Crystal Structure Of The Ternary Complex Of An Isom		3e-62
4gae_A	426	Crystal Structure Of Plasmodium Dxr In Complex With		6e-62
3iie_A	401	1-deoxy-d-xylulose 5-phosphate Reductoisomerase Fro		2e-59
1q0h_A	406	Crystal Structure Of Selenomethionine-Labelled Dxr		1e-58
1jvs_A	400	Crystal Structure Of 1-deoxy-d-xylulose 5-phosphate		3e-58
2jcv_A	398	X-Ray Structure Of 1-Deoxy-D-Xylulose 5-Phosphate R		1e-51
2c82_A	413	X-Ray Structure Of 1-Deoxy-D-Xylulose 5-Phosphate R		2e-51
2jcx_A	398	X-Ray Structure Of Mutant 1-Deoxy-D-Xylulose 5-Phos		7e-51
3a06_A	376	Crystal Structure Of Dxr From Thermooga Maritia, In		2e-42

>pdb|1Q0L|A Chain A, Crystal Structure Of Dxr In Complex With Fosmidomycin Length = 406

Iteration: 1
 Score =  241 bits (615), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 126/291 (43%), Positives = 170/291 (58%), Gaps = 10/291 (3%)
Query: 75  GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNE 134
           G K +++LGSTGSIG  TLD+V  + + FRVVAL AG N+T + +Q   F P+   + +E
Sbjct: 8   GMKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDE 67
Query: 135 SLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD 194
           +    +K  L     + E+L+G+Q   + A   D   V+  IVG AGL PT+AAI AGK 
Sbjct: 68  ASAKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKT 127
Query: 195 IALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI----------QGLPEGALR 244
           I LANKE+L+  G   +    +   ++LP DSEH+AIFQ +            L +  + 
Sbjct: 128 ILLANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVV 187
Query: 245 RIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLF 304
            I+LT SGG FR+ P+  L  +    A +HPNWSMG+KI+VDSAT+ NKGLE IEA +LF
Sbjct: 188 SILLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLF 247
Query: 305 GAEYDNXXXXXXXXXXXXXMVETQDSSVIGQLGWPDMRLPIIYTMSWPERI 355
            A                 MV  QD SV+ QLG PDMR PI +TM+WP R+
Sbjct: 248 NASASQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDMRTPIAHTMAWPNRV 298

>pdb|3R0I|A Chain A, Ispc In Complex With An N-Methyl-Substituted Hydroxamic Acid Length = 410

Iteration: 1
 Score =  240 bits (612), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 125/289 (43%), Positives = 169/289 (58%), Gaps = 10/289 (3%)
Query: 77  KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
           K +++LGSTGSIG  TLD+V  + + FRVVAL AG N+T + +Q   F P+   + +E+ 
Sbjct: 14  KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEAS 73
Query: 137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
              +K  L     + E+L+G+Q   + A   D   V+  IVG AGL PT+AAI AGK I 
Sbjct: 74  AKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTIL 133
Query: 197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI----------QGLPEGALRRI 246
           LANKE+L+  G   +    +   ++LP DSEH+AIFQ +            L +  +  I
Sbjct: 134 LANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSI 193
Query: 247 ILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGA 306
           +LT SGG FR+ P+  L  +    A +HPNWSMG+KI+VDSAT+ NKGLE IEA +LF A
Sbjct: 194 LLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFNA 253
Query: 307 EYDNXXXXXXXXXXXXXMVETQDSSVIGQLGWPDMRLPIIYTMSWPERI 355
                            MV  QD SV+ QLG PDMR PI +TM+WP R+
Sbjct: 254 SASQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDMRTPIAHTMAWPNRV 302

>pdb|3ANL|A Chain A, Crystal Structure Of 1-Deoxy-D-Xylulose 5-Phosphate Reductoisomerase (Dxr) Complexed With Pyridin-2-Ylmethylphosphonic Acid Length = 420

Iteration: 1
 Score =  239 bits (611), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 125/289 (43%), Positives = 169/289 (58%), Gaps = 10/289 (3%)
Query: 77  KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
           K +++LGSTGSIG  TLD+V  + + FRVVAL AG N+T + +Q   F P+   + +E+ 
Sbjct: 12  KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEAS 71
Query: 137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
              +K  L     + E+L+G+Q   + A   D   V+  IVG AGL PT+AAI AGK I 
Sbjct: 72  AKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTIL 131
Query: 197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI----------QGLPEGALRRI 246
           LANKE+L+  G   +    +   ++LP DSEH+AIFQ +            L +  +  I
Sbjct: 132 LANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSI 191
Query: 247 ILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGA 306
           +LT SGG FR+ P+  L  +    A +HPNWSMG+KI+VDSAT+ NKGLE IEA +LF A
Sbjct: 192 LLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFNA 251
Query: 307 EYDNXXXXXXXXXXXXXMVETQDSSVIGQLGWPDMRLPIIYTMSWPERI 355
                            MV  QD SV+ QLG PDMR PI +TM+WP R+
Sbjct: 252 SASQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDMRTPIAHTMAWPNRV 300

>pdb|1T1R|A Chain A, Crystal Structure Of The Reductoisomerase Complexed With A Bisphosphonate Length = 398

Iteration: 1
 Score =  239 bits (611), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 125/289 (43%), Positives = 169/289 (58%), Gaps = 10/289 (3%)
Query: 77  KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
           K +++LGSTGSIG  TLD+V  + + FRVVAL AG N+T + +Q   F P+   + +E+ 
Sbjct: 2   KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEAS 61
Query: 137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
              +K  L     + E+L+G+Q   + A   D   V+  IVG AGL PT+AAI AGK I 
Sbjct: 62  AKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTIL 121
Query: 197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI----------QGLPEGALRRI 246
           LANKE+L+  G   +    +   ++LP DSEH+AIFQ +            L +  +  I
Sbjct: 122 LANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSI 181
Query: 247 ILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGA 306
           +LT SGG FR+ P+  L  +    A +HPNWSMG+KI+VDSAT+ NKGLE IEA +LF A
Sbjct: 182 LLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFNA 241
Query: 307 EYDNXXXXXXXXXXXXXMVETQDSSVIGQLGWPDMRLPIIYTMSWPERI 355
                            MV  QD SV+ QLG PDMR PI +TM+WP R+
Sbjct: 242 SASQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDMRTPIAHTMAWPNRV 290

>pdb|1K5H|A Chain A, 1-Deoxy-D-Xylulose-5-Phosphate Reductoisomerase Length = 398

Iteration: 1
 Score =  239 bits (611), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 125/289 (43%), Positives = 169/289 (58%), Gaps = 10/289 (3%)
Query: 77  KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
           K +++LGSTGSIG  TLD+V  + + FRVVAL AG N+T + +Q   F P+   + +E+ 
Sbjct: 2   KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEAS 61
Query: 137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
              +K  L     + E+L+G+Q   + A   D   V+  IVG AGL PT+AAI AGK I 
Sbjct: 62  AKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTIL 121
Query: 197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI----------QGLPEGALRRI 246
           LANKE+L+  G   +    +   ++LP DSEH+AIFQ +            L +  +  I
Sbjct: 122 LANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSI 181
Query: 247 ILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGA 306
           +LT SGG FR+ P+  L  +    A +HPNWSMG+KI+VDSAT+ NKGLE IEA +LF A
Sbjct: 182 LLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFNA 241
Query: 307 EYDNXXXXXXXXXXXXXMVETQDSSVIGQLGWPDMRLPIIYTMSWPERI 355
                            MV  QD SV+ QLG PDMR PI +TM+WP R+
Sbjct: 242 SASQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDMRTPIAHTMAWPNRV 290

>pdb|2EGH|A Chain A, Crystal Structure Of 1-Deoxy-D-Xylulose 5-Phosphate Reductoisomerase Complexed With A Magnesium Ion, Nadph And Fosmidomycin Length = 424

Iteration: 1
 Score =  239 bits (611), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 125/289 (43%), Positives = 169/289 (58%), Gaps = 10/289 (3%)
Query: 77  KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
           K +++LGSTGSIG  TLD+V  + + FRVVAL AG N+T + +Q   F P+   + +E+ 
Sbjct: 12  KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEAS 71
Query: 137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
              +K  L     + E+L+G+Q   + A   D   V+  IVG AGL PT+AAI AGK I 
Sbjct: 72  AKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTIL 131
Query: 197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI----------QGLPEGALRRI 246
           LANKE+L+  G   +    +   ++LP DSEH+AIFQ +            L +  +  I
Sbjct: 132 LANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSI 191
Query: 247 ILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGA 306
           +LT SGG FR+ P+  L  +    A +HPNWSMG+KI+VDSAT+ NKGLE IEA +LF A
Sbjct: 192 LLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFNA 251
Query: 307 EYDNXXXXXXXXXXXXXMVETQDSSVIGQLGWPDMRLPIIYTMSWPERI 355
                            MV  QD SV+ QLG PDMR PI +TM+WP R+
Sbjct: 252 SASQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDMRTPIAHTMAWPNRV 300

>pdb|1R0K|A Chain A, Crystal Structure Of 1-Deoxy-D-Xylulose 5-Phosphate Reductoisomerase From Zymomonas Mobilis Length = 388

Iteration: 1
 Score =  238 bits (608), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 127/294 (43%), Positives = 181/294 (61%), Gaps = 6/294 (2%)
Query: 76  PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNES 135
           P+ ++VLG+TGSIG  TLD++  + D+++V+AL A  N+  LAD  KR   +   + + S
Sbjct: 4   PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPS 63
Query: 136 LLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI 195
           L +++KEALA      E  AG   ++EAA    A   +  I+GCAGLK T+AAI  GK +
Sbjct: 64  LYNDLKEALAG--SSVEAAAGADALVEAAMM-GADWTMAAIIGCAGLKATLAAIRKGKTV 120
Query: 196 ALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAF 255
           ALANKE+L++ G  ++    +H   +LP DSEH+AIFQC        +RRII+TASGG F
Sbjct: 121 ALANKESLVSAGGLMIDAVREHGTTLLPVDSEHNAIFQCFPHHNRDYVRRIIITASGGPF 180
Query: 256 RDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNXXXXX 315
           R   + ++  V    A++HPNWSMG KI++DSAT+ NKGLE+IEA +LF    +      
Sbjct: 181 RTTSLAEMATVTPERAVQHPNWSMGAKISIDSATMMNKGLELIEAFHLFQIPLEKFEILV 240
Query: 316 XXXXXXXXMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSK 369
                   MVE  D S++ Q+G PDMR PI +T++WP+R+   E     LD +K
Sbjct: 241 HPQSVIHSMVEYLDGSILAQIGSPDMRTPIGHTLAWPKRM---ETPAESLDFTK 291

>pdb|3AU8|A Chain A, Crystal Structure Of The Ternary Complex Of An Isomerase Length = 488

Iteration: 1
 Score =  235 bits (599), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 122/298 (40%), Positives = 182/298 (61%), Gaps = 18/298 (6%)
Query: 76  PKPISVLGSTGSIGTQTLDIVAEH---EDKFRVVALAAGSNITLLADQVKRFKPQVVAVR 132
           P  +++ GSTGSIGT  L+I+ E    E+ F V AL    ++  L +Q + F P+ + + 
Sbjct: 77  PINVAIFGSTGSIGTNALNIIRECNKIENVFNVKALYVNKSVNELYEQAREFLPEYLCIH 136
Query: 133 NESLLDEIKEALANVEE-KPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEA 191
           ++S+ +E+KE + N+++ KP IL G++G+ E         +V GI    GL  T+ AI  
Sbjct: 137 DKSVYEELKELVKNIKDYKPIILCGDEGMKEICSSNSIDKIVIGIDSFQGLYSTMYAIMN 196
Query: 192 GKDIALANKETLIAGGPFVLPLAHKH-NIKILPADSEHSAIFQCIQG---LPEGALR--- 244
            K +ALANKE++++ G F+  L + H N KI+P DSEHSAIFQC+     L    L+   
Sbjct: 197 NKIVALANKESIVSAGFFLKKLLNIHKNAKIIPVDSEHSAIFQCLDNNKVLKTKCLQDNF 256
Query: 245 -------RIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEV 297
                  +I L +SGG F++  +++LK V   +ALKHP W MGKKIT+DSAT+ NKGLEV
Sbjct: 257 SKINNINKIFLCSSGGPFQNLTMDELKNVTSENALKHPKWKMGKKITIDSATMMNKGLEV 316
Query: 298 IEAHYLFGAEYDNXXXXXXXXXXXXXMVETQDSSVIGQLGWPDMRLPIIYTMSWPERI 355
           IE H+LF  +Y++              VE  D SVI Q+ +PDM++PI+Y+++WP+RI
Sbjct: 317 IETHFLFDVDYNDIEVIVHKECIIHSCVEFIDKSVISQMYYPDMQIPILYSLTWPDRI 374

>pdb|4GAE|A Chain A, Crystal Structure Of Plasmodium Dxr In Complex With A Pyridine- Containing Inhibitor Length = 426

Iteration: 1
 Score =  234 bits (597), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 121/298 (40%), Positives = 182/298 (61%), Gaps = 18/298 (6%)
Query: 76  PKPISVLGSTGSIGTQTLDIVAEH---EDKFRVVALAAGSNITLLADQVKRFKPQVVAVR 132
           P  +++ GSTGSIGT  L+I+ E    E+ F V AL    ++  L +Q + F P+ + + 
Sbjct: 15  PINVAIFGSTGSIGTNALNIIRECNKIENVFNVKALYVNKSVNELYEQAREFLPEYLCIH 74
Query: 133 NESLLDEIKEALANVEE-KPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEA 191
           ++S+ +E+KE + N+++ KP IL G++G+ E         +V GI    GL  T+ AI  
Sbjct: 75  DKSVYEELKELVKNIKDYKPIILCGDEGMKEICSSNSIDKIVIGIDSFQGLYSTMYAIMN 134
Query: 192 GKDIALANKETLIAGGPFVLPLAHKH-NIKILPADSEHSAIFQCIQG--------LPEG- 241
            K +ALANKE++++ G F+  L + H N KI+P DSEHSAIFQC+          L +  
Sbjct: 135 NKIVALANKESIVSAGFFLKKLLNIHKNAKIIPVDSEHSAIFQCLDNNKVIKTKCLQDNF 194
Query: 242 ----ALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEV 297
                + +I L +SGG F++  +++LK V   +ALKHP W MGKKIT+DSAT+ NKGLEV
Sbjct: 195 SKINNINKIFLCSSGGPFQNLTMDELKNVTSENALKHPKWKMGKKITIDSATMMNKGLEV 254
Query: 298 IEAHYLFGAEYDNXXXXXXXXXXXXXMVETQDSSVIGQLGWPDMRLPIIYTMSWPERI 355
           IE H+LF  +Y++              VE  D SVI Q+ +PDM++PI+Y+++WP+RI
Sbjct: 255 IETHFLFDVDYNDIEVIVHKECIIHSCVEFIDKSVISQMYYPDMQIPILYSLTWPDRI 312

>pdb|3IIE|A Chain A, 1-deoxy-d-xylulose 5-phosphate Reductoisomerase From Yersinia Pestis. Length = 401

Iteration: 1
 Score =  226 bits (575), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 120/289 (41%), Positives = 163/289 (56%), Gaps = 10/289 (3%)
Query: 77  KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
           K +++LGSTGSIG  TL +V  + + F+V AL AG N+  +A Q   F P+  A+ +E  
Sbjct: 5   KQLTILGSTGSIGNSTLSVVRANPELFKVTALVAGRNVREMAQQCLEFSPRYAAMSDEHS 64
Query: 137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
              ++  LA      E+ +GE    E A   D   V+  IVG AGL  T+AAI AGK + 
Sbjct: 65  AKSLRLLLAEQGSDTEVYSGETAACELAALDDVDQVMAAIVGIAGLPSTLAAIRAGKQVL 124
Query: 197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI----------QGLPEGALRRI 246
           LANKE+LI  G   +    +   ++LP DSEH+AIFQ +            L E  + RI
Sbjct: 125 LANKESLITCGKLFMDEVKRSRAQLLPIDSEHNAIFQSLPERIQRQLGYSSLNENGVSRI 184
Query: 247 ILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGA 306
           ILT SGG FR+ P+ +  +V    A  HPNWSMG+KI+VDSAT+ NKGLE IEA +LF A
Sbjct: 185 ILTGSGGPFRETPLSQFSDVTPDQACAHPNWSMGRKISVDSATMMNKGLEYIEARWLFNA 244
Query: 307 EYDNXXXXXXXXXXXXXMVETQDSSVIGQLGWPDMRLPIIYTMSWPERI 355
             +              MV   D S++ Q+G PDMR PI + M++P R+
Sbjct: 245 SAEQIEVVLHPQSVIHSMVRYHDGSILAQMGTPDMRTPIAHAMAYPMRV 293

>pdb|1Q0H|A Chain A, Crystal Structure Of Selenomethionine-Labelled Dxr In Complex With Fosmidomycin Length = 406

Iteration: 1
 Score =  223 bits (569), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 123/291 (42%), Positives = 161/291 (55%), Gaps = 10/291 (3%)
Query: 75  GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNE 134
           G K +++LGSTGSIG  TLD+V  + + FRVVAL AG N+T   +Q   F P+     +E
Sbjct: 8   GXKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRXVEQCLEFSPRYAVXDDE 67
Query: 135 SLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD 194
           +    +K  L     + E+L+G+Q   + A   D   V   IVG AGL PT+AAI AGK 
Sbjct: 68  ASAKLLKTXLQQQGSRTEVLSGQQAACDXAALEDVDQVXAAIVGAAGLLPTLAAIRAGKT 127
Query: 195 IALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI----------QGLPEGALR 244
           I LANKE+L+  G        +   ++LP DSEH+AIFQ +            L +  + 
Sbjct: 128 ILLANKESLVTCGRLFXDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVV 187
Query: 245 RIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLF 304
            I+LT SGG FR+ P+  L       A +HPNWS G+KI+VDSAT  NKGLE IEA +LF
Sbjct: 188 SILLTGSGGPFRETPLRDLATXTPDQACRHPNWSXGRKISVDSATXXNKGLEYIEARWLF 247
Query: 305 GAEYDNXXXXXXXXXXXXXMVETQDSSVIGQLGWPDMRLPIIYTMSWPERI 355
            A                  V  QD SV+ QLG PD R PI +T +WP R+
Sbjct: 248 NASASQXEVLIHPQSVIHSXVRYQDGSVLAQLGEPDXRTPIAHTXAWPNRV 298

>pdb|1JVS|A Chain A, Crystal Structure Of 1-deoxy-d-xylulose 5-phosphate Reductoisomerase; A Target Enzyme For Antimalarial Drugs Length = 400

Iteration: 1
 Score =  221 bits (564), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 122/289 (42%), Positives = 160/289 (55%), Gaps = 10/289 (3%)
Query: 77  KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
           K +++LGSTGSIG  TLD+V  + + FRVVAL AG N+T   +Q   F P+     +E+ 
Sbjct: 2   KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRXVEQCLEFSPRYAVXDDEAS 61
Query: 137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
              +K  L     + E+L+G+Q   + A   D   V   IVG AGL PT+AAI AGK I 
Sbjct: 62  AKLLKTXLQQQGSRTEVLSGQQAACDXAALEDVDQVXAAIVGAAGLLPTLAAIRAGKTIL 121
Query: 197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI----------QGLPEGALRRI 246
           LANKE+L+  G        +   ++LP DSEH+AIFQ +            L +  +  I
Sbjct: 122 LANKESLVTCGRLFXDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSI 181
Query: 247 ILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGA 306
           +LT SGG FR+ P+  L       A +HPNWS G+KI+VDSAT  NKGLE IEA +LF A
Sbjct: 182 LLTGSGGPFRETPLRDLATXTPDQACRHPNWSXGRKISVDSATXXNKGLEYIEARWLFNA 241
Query: 307 EYDNXXXXXXXXXXXXXMVETQDSSVIGQLGWPDMRLPIIYTMSWPERI 355
                             V  QD SV+ QLG PD R PI +T +WP R+
Sbjct: 242 SASQXEVLIHPQSVIHSXVRYQDGSVLAQLGEPDXRTPIAHTXAWPNRV 290

>pdb|2JCV|A Chain A, X-Ray Structure Of 1-Deoxy-D-Xylulose 5-Phosphate Reductoisomerase, Dxr, Rv2870c, From Mycobacterium Tuberculosis, In Complex With Fosmidomycin And Nadph Length = 398

Iteration: 1
 Score =  200 bits (509), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 122/291 (41%), Positives = 160/291 (54%), Gaps = 10/291 (3%)
Query: 65  VTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF 124
           VT +     DG   + VLGSTGSIGTQ L ++A++ D+F VV LAAG       D + R 
Sbjct: 10  VTNSTDGRADGRLRVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGGAHL---DTLLRQ 66
Query: 125 KPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKP 184
           + Q   V N ++ DE   A   V + P    G           +A  V+  +VG  GL+P
Sbjct: 67  RAQT-GVTNIAVADE--HAAQRVGDIP--YHGSDAATRLVEQTEADVVLNALVGALGLRP 121
Query: 185 TVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALR 244
           T+AA++ G  +ALANKE+L+AGG  VL  A     +I+P DSEHSA+ QC++G     + 
Sbjct: 122 TLAALKTGARLALANKESLVAGGSLVLRAARPG--QIVPVDSEHSALAQCLRGGTPDEVA 179
Query: 245 RIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLF 304
           +++LTASGG FR W    L+ V    A  HP WSMG   T++SA+L NKGLEVIE H LF
Sbjct: 180 KLVLTASGGPFRGWSAADLEHVTPEQAGAHPTWSMGPMNTLNSASLVNKGLEVIETHLLF 239
Query: 305 GAEYDNXXXXXXXXXXXXXMVETQDSSVIGQLGWPDMRLPIIYTMSWPERI 355
           G  YD              MV   D S I Q   PDM+LPI   + WP R+
Sbjct: 240 GIPYDRIDVVVHPQSIIHSMVTFIDGSTIAQASPPDMKLPISLALGWPRRV 290

>pdb|2C82|A Chain A, X-Ray Structure Of 1-Deoxy-D-Xylulose 5-Phosphate Reductoisomerase, Dxr, Rv2870c, From Mycobacterium Tuberculosis Length = 413

Iteration: 1
 Score =  199 bits (506), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 120/282 (42%), Positives = 157/282 (55%), Gaps = 10/282 (3%)
Query: 74  DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRN 133
           DG   + VLGSTGSIGTQ L ++A++ D+F VV LAAG       D + R + Q   V N
Sbjct: 10  DGRLRVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGGAHL---DTLLRQRAQT-GVTN 65
Query: 134 ESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGK 193
            ++ DE   A   V + P    G           +A  V+  +VG  GL+PT+AA++ G 
Sbjct: 66  IAVADE--HAAQRVGDIP--YHGSDAATRLVEQTEADVVLNALVGALGLRPTLAALKTGA 121
Query: 194 DIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGG 253
            +ALANKE+L+AGG  VL  A     +I+P DSEHSA+ QC++G     + +++LTASGG
Sbjct: 122 RLALANKESLVAGGSLVLRAARPG--QIVPVDSEHSALAQCLRGGTPDEVAKLVLTASGG 179
Query: 254 AFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNXXX 313
            FR W    L+ V    A  HP WSMG   T++SA+L NKGLEVIE H LFG  YD    
Sbjct: 180 PFRGWSAADLEHVTPEQAGAHPTWSMGPMNTLNSASLVNKGLEVIETHLLFGIPYDRIDV 239
Query: 314 XXXXXXXXXXMVETQDSSVIGQLGWPDMRLPIIYTMSWPERI 355
                     MV   D S I Q   PDM+LPI   + WP R+
Sbjct: 240 VVHPQSIIHSMVTFIDGSTIAQASPPDMKLPISLALGWPRRV 281

>pdb|2JCX|A Chain A, X-Ray Structure Of Mutant 1-Deoxy-D-Xylulose 5-Phosphate Reductoisomerase, Dxr, Rv2870c, From Mycobacterium Tuberculosis, In Complex With Fosmidomycin And Nadph Length = 398

Iteration: 1
 Score =  197 bits (501), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 120/291 (41%), Positives = 160/291 (54%), Gaps = 10/291 (3%)
Query: 65  VTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF 124
           VT +     DG   + VLGSTGSIGTQ L ++A++ D+F VV LAAG       D + R 
Sbjct: 10  VTNSTDGRADGRLRVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGGAHL---DTLLRQ 66
Query: 125 KPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKP 184
           + Q   V N ++ DE   A   V + P    G           +A  V+  +VG  GL+P
Sbjct: 67  RAQT-GVTNIAVADE--HAAQRVGDIP--YHGSDAATRLVEQTEADVVLNALVGALGLRP 121
Query: 185 TVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALR 244
           T+AA++ G  +ALANKE+L+AGG  VL  A     +I+P +SEHSA+ QC++G     + 
Sbjct: 122 TLAALKTGARLALANKESLVAGGSLVLRAARPG--QIVPVNSEHSALAQCLRGGTPDEVA 179
Query: 245 RIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLF 304
           +++LTASGG FR W    L+ V    A  HP WSMG   T++SA+L NKGL+VIE H LF
Sbjct: 180 KLVLTASGGPFRGWSAADLEHVTPEQAGAHPTWSMGPMNTLNSASLVNKGLQVIETHLLF 239
Query: 305 GAEYDNXXXXXXXXXXXXXMVETQDSSVIGQLGWPDMRLPIIYTMSWPERI 355
           G  YD              MV   D S I Q   PDM+LPI   + WP R+
Sbjct: 240 GIPYDRIDVVVHPQSIIHSMVTFIDGSTIAQASPPDMKLPISLALGWPRRV 290

>pdb|3A06|A Chain A, Crystal Structure Of Dxr From Thermooga Maritia, In Complex Fosmidomycin And Nadph Length = 376

Iteration: 1
 Score =  169 bits (428), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/279 (36%), Positives = 161/279 (57%), Gaps = 14/279 (5%)
Query: 77  KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
           + + +LG+TGSIGTQTLD++ + +   R++ ++  SN+ L    VK F  + VA+  +  
Sbjct: 4   RTLVILGATGSIGTQTLDVLKKVKG-IRLIGISFHSNLELAFKIVKEFNVKNVAITGDV- 61
Query: 137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
             E +++  NV +    +   + ++EA + PD   V   + G +GL+  +A++E  K + 
Sbjct: 62  --EFEDSSINVWKGSHSI---EEMLEALK-PDITMV--AVSGFSGLRAVLASLEHSKRVC 113
Query: 197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFR 256
           LANKE+L+ GG  V     +   +++P DSEHSAIFQ ++  PE  + +++LTASGGA R
Sbjct: 114 LANKESLVCGGFLVKKKLKEKGTELIPVDSEHSAIFQVME--PE--VEKVVLTASGGALR 169
Query: 257 DWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNXXXXXX 316
           DW + K+   +  D LKHP W+MG +ITVDSAT+ NK  EV+EA  LF   ++       
Sbjct: 170 DWKISKIDRARPEDVLKHPVWNMGARITVDSATMVNKAFEVLEAMELFELPFEKIEVKIH 229
Query: 317 XXXXXXXMVETQDSSVIGQLGWPDMRLPIIYTMSWPERI 355
                   V   D +V   +  PDMR+PI Y + +P R+
Sbjct: 230 REGLVHGAVVLPDGNVKMVVSPPDMRIPISYALFYPRRV 268

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	369
1q0q_A	406	1-deoxy-D-xylulose 5-phosphate reductoisomerase; o	0.0
1r0k_A	388	1-deoxy-D-xylulose 5-phosphate reductoisomerase; N	0.0
3au8_A	488	1-deoxy-D-xylulose 5-phosphate reductoisomerase; N	0.0
2y1e_A	398	1-deoxy-D-xylulose 5-phosphate reductoisomerase; o	0.0
3a06_A	376	1-deoxy-D-xylulose 5-phosphate reductoisomerase; M	0.0
3upl_A	446	Oxidoreductase; rossmann fold, NADPH binding; 1.50	1e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-06
3c8m_A	331	Homoserine dehydrogenase; structural genomics, APC	7e-06
3do5_A	327	HOM, homoserine dehydrogenase; NP_069768.1, putati	8e-06
3ing_A	325	Homoserine dehydrogenase; NP_394635.1, structural	5e-04
1ebf_A	358	Homoserine dehydrogenase; dinucleotide, NAD, dimer	6e-04

>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A Length = 406

 Score =  546 bits (1410), Expect = 0.0
 Identities = 138/309 (44%), Positives = 186/309 (60%), Gaps = 13/309 (4%)

Query: 71  KTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVA 130
               G K +++LGSTGSIG  TLD+V  + + FRVVAL AG N+T + +Q   F P+   
Sbjct: 4   HHHSGMKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAV 63

Query: 131 VRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIE 190
           + +E+    +K  L     + E+L+G+Q   + A   D   V+  IVG AGL PT+AAI 
Sbjct: 64  MDDEASAKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIR 123

Query: 191 AGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG----------LPE 240
           AGK I LANKE+L+  G   +    +   ++LP DSEH+AIFQ +            L +
Sbjct: 124 AGKTILLANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQ 183

Query: 241 GALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEA 300
             +  I+LT SGG FR+ P+  L  +    A +HPNWSMG+KI+VDSAT+ NKGLE IEA
Sbjct: 184 NGVVSILLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEA 243

Query: 301 HYLFGAEYDNIEIIIHPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSEL 360
            +LF A    +E++IHPQS+IHSMV  QD SV+ QLG PDMR PI +TM+WP R+     
Sbjct: 244 RWLFNASASQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDMRTPIAHTMAWPNRVNSG-- 301

Query: 361 TWPRLDLSK 369
               LD  K
Sbjct: 302 -VKPLDFCK 309

>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A* Length = 388

 Score =  539 bits (1392), Expect = 0.0
 Identities = 136/295 (46%), Positives = 193/295 (65%), Gaps = 6/295 (2%)

Query: 75  GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNE 134
            P+ ++VLG+TGSIG  TLD++  + D+++V+AL A  N+  LAD  KR   +   + + 
Sbjct: 3   QPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADP 62

Query: 135 SLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD 194
           SL +++KEALA      E  AG   ++EAA    A   +  I+GCAGLK T+AAI  GK 
Sbjct: 63  SLYNDLKEALAG--SSVEAAAGADALVEAA-MMGADWTMAAIIGCAGLKATLAAIRKGKT 119

Query: 195 IALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGA 254
           +ALANKE+L++ G  ++    +H   +LP DSEH+AIFQC        +RRII+TASGG 
Sbjct: 120 VALANKESLVSAGGLMIDAVREHGTTLLPVDSEHNAIFQCFPHHNRDYVRRIIITASGGP 179

Query: 255 FRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEII 314
           FR   + ++  V    A++HPNWSMG KI++DSAT+ NKGLE+IEA +LF    +  EI+
Sbjct: 180 FRTTSLAEMATVTPERAVQHPNWSMGAKISIDSATMMNKGLELIEAFHLFQIPLEKFEIL 239

Query: 315 IHPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSK 369
           +HPQS+IHSMVE  D S++ Q+G PDMR PI +T++WP+R+   E     LD +K
Sbjct: 240 VHPQSVIHSMVEYLDGSILAQIGSPDMRTPIGHTLAWPKRM---ETPAESLDFTK 291

>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A* Length = 488

 Score =  537 bits (1385), Expect = 0.0
 Identities = 137/359 (38%), Positives = 207/359 (57%), Gaps = 30/359 (8%)

Query: 36  KRKDNATATFGRIVQCSAQGPPPAWPGRAVTETFRK-------TWDGPKPISVLGSTGSI 88
           +RK+NA   +G     +          R       K           P  +++ GSTGSI
Sbjct: 32  RRKNNAYINYGI--GYNGPDNKITKSRRCKRIKLCKKDLIDIGAIKKPINVAIFGSTGSI 89

Query: 89  GTQTLDIVAEHE---DKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALA 145
           GT  L+I+ E     + F V AL    ++  L +Q + F P+ + + ++S+ +E+KE + 
Sbjct: 90  GTNALNIIRECNKIENVFNVKALYVNKSVNELYEQAREFLPEYLCIHDKSVYEELKELVK 149

Query: 146 NVEE-KPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLI 204
           N+++ KP IL G++G+ E         +V GI    GL  T+ AI   K +ALANKE+++
Sbjct: 150 NIKDYKPIILCGDEGMKEICSSNSIDKIVIGIDSFQGLYSTMYAIMNNKIVALANKESIV 209

Query: 205 AGGPFVLPLAHKH-NIKILPADSEHSAIFQCIQG-------------LPEGALRRIILTA 250
           + G F+  L + H N KI+P DSEHSAIFQC+                    + +I L +
Sbjct: 210 SAGFFLKKLLNIHKNAKIIPVDSEHSAIFQCLDNNKVLKTKCLQDNFSKINNINKIFLCS 269

Query: 251 SGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDN 310
           SGG F++  +++LK V   +ALKHP W MGKKIT+DSAT+ NKGLEVIE H+LF  +Y++
Sbjct: 270 SGGPFQNLTMDELKNVTSENALKHPKWKMGKKITIDSATMMNKGLEVIETHFLFDVDYND 329

Query: 311 IEIIIHPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSK 369
           IE+I+H + IIHS VE  D SVI Q+ +PDM++PI+Y+++WP+RI   +     LDL++
Sbjct: 330 IEVIVHKECIIHSCVEFIDKSVISQMYYPDMQIPILYSLTWPDRI---KTNLKPLDLAQ 385

>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A Length = 398

 Score =  530 bits (1367), Expect = 0.0
 Identities = 128/313 (40%), Positives = 174/313 (55%), Gaps = 16/313 (5%)

Query: 59  AWPGRA-VTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-SNITL 116
           A      VT +     DG   + VLGSTGSIGTQ L ++A++ D+F VV LAAG +++  
Sbjct: 3   AHHHHHHVTNSTDGRADGRLRVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGGAHLDT 62

Query: 117 LADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGI 176
           L  Q  +     +AV +E     + +             G           +A  V+  +
Sbjct: 63  LLRQRAQTGVTNIAVADEHAAQRVGD---------IPYHGSDAATRLVEQTEADVVLNAL 113

Query: 177 VGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 236
           VG  GL+PT+AA++ G  +ALANKE+L+AGG  VL  A     +I+P DSEHSA+ QC++
Sbjct: 114 VGALGLRPTLAALKTGARLALANKESLVAGGSLVLRAARPG--QIVPVDSEHSALAQCLR 171

Query: 237 GLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLE 296
           G     + +++LTASGG FR W    L+ V    A  HP WSMG   T++SA+L NKGLE
Sbjct: 172 GGTPDEVAKLVLTASGGPFRGWSAADLEHVTPEQAGAHPTWSMGPMNTLNSASLVNKGLE 231

Query: 297 VIEAHYLFGAEYDNIEIIIHPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIY 356
           VIE H LFG  YD I++++HPQSIIHSMV   D S I Q   PDM+LPI   + WP R+ 
Sbjct: 232 VIETHLLFGIPYDRIDVVVHPQSIIHSMVTFIDGSTIAQASPPDMKLPISLALGWPRRVS 291

Query: 357 CSELTWPRLDLSK 369
            +       D   
Sbjct: 292 GA---AAACDFHT 301

>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A* Length = 376

 Score =  508 bits (1311), Expect = 0.0
 Identities = 100/294 (34%), Positives = 158/294 (53%), Gaps = 17/294 (5%)

Query: 76  PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNES 135
            + + +LG+TGSIGTQTLD++ +     R++ ++  SN+ L    VK F  + VA+  + 
Sbjct: 3   ERTLVILGATGSIGTQTLDVLKKV-KGIRLIGISFHSNLELAFKIVKEFNVKNVAITGDV 61

Query: 136 LLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI 195
             ++             +  G   + E          +  + G +GL+  +A++E  K +
Sbjct: 62  EFEDSS---------INVWKGSHSIEEMLEALKPDITMVAVSGFSGLRAVLASLEHSKRV 112

Query: 196 ALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAF 255
            LANKE+L+ GG  V     +   +++P DSEHSAIFQ ++      + +++LTASGGA 
Sbjct: 113 CLANKESLVCGGFLVKKKLKEKGTELIPVDSEHSAIFQVMEP----EVEKVVLTASGGAL 168

Query: 256 RDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIII 315
           RDW + K+   +  D LKHP W+MG +ITVDSAT+ NK  EV+EA  LF   ++ IE+ I
Sbjct: 169 RDWKISKIDRARPEDVLKHPVWNMGARITVDSATMVNKAFEVLEAMELFELPFEKIEVKI 228

Query: 316 HPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSK 369
           H + ++H  V   D +V   +  PDMR+PI Y + +P R+         L    
Sbjct: 229 HREGLVHGAVVLPDGNVKMVVSPPDMRIPISYALFYPRRVALE---PFFLRTIS 279

>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A* Length = 446

 Score = 49.0 bits (116), Expect = 1e-06
 Identities = 42/278 (15%), Positives = 91/278 (32%), Gaps = 26/278 (9%)

Query: 77  KPISV--LGSTGSIGTQTLDIVA--EHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVR 132
           KPI +  +G  G +GT  +  VA  +  +   + A    +    +       +    A  
Sbjct: 22  KPIRIGLIG-AGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATT 80

Query: 133 NESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG 192
             ++   I+     V +  +++     +       D +   TGI    G +  +AAI  G
Sbjct: 81  ESAMTRAIEAGKIAVTDDNDLILSNPLI-------DVIIDATGIPE-VGAETGIAAIRNG 132

Query: 193 KDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASG 252
           K + + N E  +  GP++   A K  +       +  +    +          ++    G
Sbjct: 133 KHLVMMNVEADVTIGPYLKAQADKQGVIYSLGAGDEPSSCMELIEFVSALGYEVVSAGKG 192

Query: 253 GAFRDWPVEKLKEVKVADALKHPNWSM------GKKITVDSATLFNKGLEVIEAHYLFGA 306
                       + +     ++ N  +      G K  V+ A + N    V +   + G 
Sbjct: 193 KNNPLNFDATPDDYRQEADRRNMNVRLLVEFIDGSKTMVEMAAIANATGLVPDIAGMHG- 251

Query: 307 EYDNIEIIIHPQSIIHSMVETQDSSVIGQLGWPDMRLP 344
                        + H+++   +  V+ + G  D  + 
Sbjct: 252 ------PRASIDQLSHTLIPQAEGGVLSKSGVVDYSIG 283

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 48.7 bits (115), Expect = 3e-06
 Identities = 40/323 (12%), Positives = 85/323 (26%), Gaps = 118/323 (36%)

Query: 101 DKFRVVALAAGSNITLLADQVKRFK--PQVVAVRN---ESLLDEIKEALANVEEKPEILA 155
              +           +  +Q  R     QV A  N        ++++AL  +  +P    
Sbjct: 96  SPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLEL--RP---- 149

Query: 156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAH 215
             + V           ++ G++G  G K T  A++      +   +  +    F L L +
Sbjct: 150 -AKNV-----------LIDGVLGS-G-K-TWVALDVCLSYKV---QCKMDFKIFWLNLKN 191

Query: 216 KHN----IKIL-----PADSEHSAIFQCIQGLP------EGALRR-----------IILT 249
            ++    +++L       D   ++       +       +  LRR           ++L 
Sbjct: 192 CNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL- 250

Query: 250 ASGGAFRD-WPVEKLK-------------EVKVADALKHPNWSMGKKITVDSATLFNKGL 295
                  +    +                  +V D L           T  S    +  L
Sbjct: 251 ------LNVQNAKAWNAFNLSCKILLTTRFKQVTDFLS------AATTTHISLDHHSMTL 298

Query: 296 EVIEAHYLFGAEYDNIEI--------IIHPQSIIHSMVETQDSSVIGQLGWPDMRLPIIY 347
              E   L   +Y +             +P+ +          S+I +     +R     
Sbjct: 299 TPDEVKSLL-LKYLDCRPQDLPREVLTTNPRRL----------SIIAES----IR----- 338

Query: 348 TMSWPERI-YCSELTWPRLDLSK 369
                          W  ++  K
Sbjct: 339 --DGLATWDN-----WKHVNCDK 354

>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A* Length = 331

 Score = 46.5 bits (111), Expect = 7e-06
 Identities = 33/152 (21%), Positives = 52/152 (34%), Gaps = 24/152 (15%)

Query: 79  ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLD 138
           +S+ G  G++G   L I+    ++ R      G    ++           VA    S  +
Sbjct: 9   LSIFG-LGNVGLNLLRIIRSFNEENR-----LGLKFNVVF----------VADSLHSYYN 52

Query: 139 EIKEALANVEEKPEI----LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTV----AAIE 190
           E  +    +  K +     L  E      A   D   VV      A  K  +       E
Sbjct: 53  ERIDIGKVISYKEKGSLDSLEYESISASEALARDFDIVVDATPASADGKKELAFYKETFE 112

Query: 191 AGKDIALANKETLIAGGPFVLPLAHKHNIKIL 222
            GKD+  ANK  L    P ++  A  +N +I 
Sbjct: 113 NGKDVVTANKSGLANFWPEIMEYARSNNRRIR 144

>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus} Length = 327

 Score = 46.0 bits (110), Expect = 8e-06
 Identities = 24/149 (16%), Positives = 57/149 (38%), Gaps = 20/149 (13%)

Query: 79  ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLD 138
           I+++G  G++G    +++    +               +   +  FK   VA    S+  
Sbjct: 5   IAIVG-FGTVGQGVAELLIRKRE--------------EIEKAIGEFKVTAVADSKSSISG 49

Query: 139 EIK-EALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKP----TVAAIEAGK 193
           +        ++ +  +L  +   IE  R  D   ++   V              A++ GK
Sbjct: 50  DFSLVEALRMKRETGMLRDDAKAIEVVRSADYDVLIEASVTRVDGGEGVNYIREALKRGK 109

Query: 194 DIALANKETLIAGGPFVLPLAHKHNIKIL 222
            +  +NK  L+A    ++ LA ++ ++++
Sbjct: 110 HVVTSNKGPLVAEFHGLMSLAERNGVRLM 138

>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum} Length = 325

 Score = 40.7 bits (96), Expect = 5e-04
 Identities = 26/150 (17%), Positives = 52/150 (34%), Gaps = 22/150 (14%)

Query: 79  ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLD 138
           I ++G TG++G   L I+     +       +  +I ++          V   R+ +   
Sbjct: 7   IILMG-TGNVGLNVLRIIDASNRRR------SAFSIKVVG---------VSDSRSYASGR 50

Query: 139 --EIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTV----AAIEAG 192
             +I   ++N E+   I        E      A  +V                  A E+G
Sbjct: 51  NLDISSIISNKEKTGRISDRAFSGPEDLMGEAADLLVDCTPASRDGVREYSLYRMAFESG 110

Query: 193 KDIALANKETLIAGGPFVLPLAHKHNIKIL 222
            ++  ANK  L      ++  A++++  I 
Sbjct: 111 MNVVTANKSGLANKWHDIMDSANQNSKYIR 140

>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A* Length = 358

 Score = 40.7 bits (96), Expect = 6e-04
 Identities = 27/134 (20%), Positives = 47/134 (35%), Gaps = 19/134 (14%)

Query: 77  KPISV--LGSTGSIGTQTLDIVAEHED--KFRVVALAAGSNITLLADQVKRFKPQVVAVR 132
           K ++V  +G  G +G+  LD +   +    + +V LA      +  D             
Sbjct: 3   KVVNVAVIG-AGVVGSAFLDQLLAMKSTITYNLVLLAEAERSLISKDFSPL--------- 52

Query: 133 NESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG 192
             ++  + K ALA    K   L      ++ +  P  +   T     AG       +E G
Sbjct: 53  --NVGSDWKAALAASTTKTLPLDDLIAHLKTSPKPVILVDNTSSAYIAGFYTK--FVENG 108

Query: 193 KDIALANKETLIAG 206
             IA  NK+   + 
Sbjct: 109 ISIATPNKK-AFSS 121

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	369
1q0q_A	406	1-deoxy-D-xylulose 5-phosphate reductoisomerase; o	100.0
2y1e_A	398	1-deoxy-D-xylulose 5-phosphate reductoisomerase; o	100.0
3au8_A	488	1-deoxy-D-xylulose 5-phosphate reductoisomerase; N	100.0
3a06_A	376	1-deoxy-D-xylulose 5-phosphate reductoisomerase; M	100.0
1r0k_A	388	1-deoxy-D-xylulose 5-phosphate reductoisomerase; N	100.0
3upl_A	446	Oxidoreductase; rossmann fold, NADPH binding; 1.50	98.9
3ing_A	325	Homoserine dehydrogenase; NP_394635.1, structural	98.75
3do5_A	327	HOM, homoserine dehydrogenase; NP_069768.1, putati	98.68
3mtj_A	444	Homoserine dehydrogenase; rossmann-fold, PSI, MCSG	98.55
3euw_A	344	MYO-inositol dehydrogenase; protein structure init	98.53
3mz0_A	344	Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd;	98.52
3ohs_X	334	Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; d	98.52
3oqb_A	383	Oxidoreductase; structural genomics, protein struc	98.51
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	98.46
3e9m_A	330	Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA,	98.38
3btv_A	438	Galactose/lactose metabolism regulatory protein GA	98.38
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	98.37
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	98.37
3o9z_A	312	Lipopolysaccaride biosynthesis protein WBPB; oxido	98.35
3i23_A	349	Oxidoreductase, GFO/IDH/MOCA family; structural ge	98.34
3ec7_A	357	Putative dehydrogenase; alpha-beta, structural gen	98.32
1zh8_A	340	Oxidoreductase; TM0312, structural genomics, JO ce	98.27
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	98.27
2nvw_A	479	Galactose/lactose metabolism regulatory protein GA	98.26
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	98.25
3db2_A	354	Putative NADPH-dependent oxidoreductase; two domai	98.21
3dty_A	398	Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetram	98.18
3evn_A	329	Oxidoreductase, GFO/IDH/MOCA family; structural ge	98.18
2ho3_A	325	Oxidoreductase, GFO/IDH/MOCA family; streptococcus	98.16
3ezy_A	344	Dehydrogenase; structural genomics, unknown functi	98.12
3v5n_A	417	Oxidoreductase; structural genomics, PSI-biology,	98.12
3c8m_A	331	Homoserine dehydrogenase; structural genomics, APC	98.11
3moi_A	387	Probable dehydrogenase; structural genomics, PSI2,	98.11
3kux_A	352	Putative oxidoreductase; oxidoreductase family, cs	98.11
1xea_A	323	Oxidoreductase, GFO/IDH/MOCA family; structural ge	98.06
3m2t_A	359	Probable dehydrogenase; PSI, SGXNY, structural gen	98.06
3e82_A	364	Putative oxidoreductase; NAD, GFO/IDH/MOCA family,	98.05
3e18_A	359	Oxidoreductase; dehydrogenase, NAD-binding, struct	97.97
3u3x_A	361	Oxidoreductase; structural genomics, PSI-biology,	97.95
2p2s_A	336	Putative oxidoreductase; YP_050235.1, structural g	97.84
3oa2_A	318	WBPB; oxidoreductase, sugar biosynthesis, dehydrog	97.83
3ip3_A	337	Oxidoreductase, putative; structural genomics, PSI	97.82
3c1a_A	315	Putative oxidoreductase; ZP_00056571.1, oxidoreduc	97.82
3gdo_A	358	Uncharacterized oxidoreductase YVAA; structural ge	97.78
1h6d_A	433	Precursor form of glucose-fructose oxidoreductase;	97.77
3fhl_A	362	Putative oxidoreductase; NAD-binding domain, PSI-2	97.7
3f4l_A	345	Putative oxidoreductase YHHX; structural genomics,	97.66
2ixa_A	444	Alpha-N-acetylgalactosaminidase; NAD, A-ECO conver	97.58
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	97.57
1ebf_A	358	Homoserine dehydrogenase; dinucleotide, NAD, dimer	97.57
4had_A	350	Probable oxidoreductase protein; structural genomi	97.53
1ydw_A	362	AX110P-like protein; structural genomics, protein	97.51
4gqa_A	412	NAD binding oxidoreductase; structural genomics, P	97.42
4fb5_A	393	Probable oxidoreductase protein; PSI-biology, nysg	97.4
4h3v_A	390	Oxidoreductase domain protein; structural genomics	97.27
2ejw_A	332	HDH, homoserine dehydrogenase; NAD-dependent, oxid	97.21
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.18
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	97.13
4gmf_A	372	Yersiniabactin biosynthetic protein YBTU; rossmann	96.81
2czc_A	334	Glyceraldehyde-3-phosphate dehydrogenase; glycolys	96.72
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	96.71
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.69
1tlt_A	319	Putative oxidoreductase (virulence factor MVIM HO;	96.63
3uuw_A	308	Putative oxidoreductase with NAD(P)-binding rossm	96.61
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	96.48
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	96.47
4ew6_A	330	D-galactose-1-dehydrogenase protein; nysgrc, PSI-b	96.45
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	96.44
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	96.36
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.11
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	96.02
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	95.98
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	95.94
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	95.91
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	95.86
3bio_A	304	Oxidoreductase, GFO/IDH/MOCA family; structural ge	95.85
1cf2_P	337	Protein (glyceraldehyde-3-phosphate dehydrogenase)	95.77
1lc0_A	294	Biliverdin reductase A; oxidoreductase, tetrapyrro	95.74
1u8f_O	335	GAPDH, glyceraldehyde-3-phosphate dehydrogenase, l	95.71
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	95.63
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	95.54
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	95.49
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	95.48
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	95.43
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	95.42
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	95.42
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	95.39
2dc1_A	236	L-aspartate dehydrogenase; NAD, oxidoreductase; HE	95.38
1b7g_O	340	Protein (glyceraldehyde 3-phosphate dehydrogenase;	95.37
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	95.35
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	95.33
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	95.32
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	95.28
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	95.28
2yyy_A	343	Glyceraldehyde-3-phosphate dehydrogenase; glyceral	95.23
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	95.22
2nu8_A	288	Succinyl-COA ligase [ADP-forming] subunit alpha; c	95.22
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	95.2
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	95.18
1vkn_A	351	N-acetyl-gamma-glutamyl-phosphate reductase; TM178	95.18
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	95.16
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	95.14
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	95.13
1xq6_A	253	Unknown protein; structural genomics, protein stru	95.11
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	95.09
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	95.04
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	95.03
3nkl_A	141	UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fo	95.02
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	95.01
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	95.01
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	95.01
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	94.92
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	94.88
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	94.86
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	94.86
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	94.79
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	94.78
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	94.77
4eye_A	342	Probable oxidoreductase; structural genomics, niai	94.73
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	94.71
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	94.69
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	94.69
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	94.62
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	94.61
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	94.6
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	94.59
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	94.58
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	94.5
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	94.5
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	94.49
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	94.47
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	94.47
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	94.46
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	94.44
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	94.43
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	94.41
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	94.41
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	94.38
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	94.37
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	94.33
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	94.32
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	94.32
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	94.32
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	94.29
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	94.29
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	94.26
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	94.26
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	94.25
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	94.25
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	94.24
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	94.24
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	94.23
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	94.22
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	94.22
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	94.2
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	94.16
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	94.14
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	94.14
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	94.12
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	94.12
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	94.11
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	94.09
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	94.08
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	94.07
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	94.07
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	94.05
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	94.05
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	94.05
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	94.02
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	93.99
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	93.96
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	93.95
3cps_A	354	Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, g	93.93
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	93.87
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	93.85
4dqx_A	277	Probable oxidoreductase protein; structural genomi	93.84
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	93.83
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	93.82
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	93.81
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	93.79
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	93.79
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	93.78
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	93.76
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	93.76
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	93.75
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	93.75
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	93.71
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	93.71
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	93.68
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	93.67
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	93.64
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	93.59
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	93.57
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	93.57
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	93.55
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	93.53
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	93.53
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	93.52
1xq1_A	266	Putative tropinone reducatse; structural genomics,	93.5
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	93.5
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	93.49
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	93.48
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	93.48
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	93.45
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	93.43
3b1j_A	339	Glyceraldehyde 3-phosphate dehydrogenase (NADP+);	93.43
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	93.41
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	93.4
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	93.4
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	93.39
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	93.37
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	93.37
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	93.36
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	93.35
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	93.31
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	93.31
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	93.3
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	93.28
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	93.26
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	93.26
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	93.24
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	93.23
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	93.22
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	93.22
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	93.2
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	93.19
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	93.18
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	93.17
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	93.15
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	93.14
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	93.14
3da8_A	215	Probable 5'-phosphoribosylglycinamide formyltransf	93.13
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	93.12
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	93.12
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	93.11
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	93.11
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	93.11
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	93.09
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	93.09
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	93.08
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	93.07
1spx_A	278	Short-chain reductase family member (5L265); paral	93.04
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	93.03
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	93.02
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	92.98
3auf_A	229	Glycinamide ribonucleotide transformylase 1; struc	92.95
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	92.94
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	92.93
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	92.91
1rm4_O	337	Glyceraldehyde 3-phosphate dehydrogenase A; rossma	92.9
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	92.9
2x5j_O	339	E4PDH, D-erythrose-4-phosphate dehydrogenase; oxid	92.89
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	92.85
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	92.85
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	92.84
1f06_A	320	MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH	92.82
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	92.81
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	92.8
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	92.79
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	92.79
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	92.75
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	92.75
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	92.7
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	92.68
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	92.68
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	92.65
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	92.65
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	92.63
4f6l_B	508	AUSA reductase domain protein; thioester reductase	92.59
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	92.58
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	92.58
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	92.53
3cxt_A	291	Dehydrogenase with different specificities; rossma	92.52
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	92.51
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	92.5
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	92.48
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	92.46
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	92.46
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	92.45
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	92.45
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	92.45
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	92.44
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	92.44
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	92.42
1obf_O	335	Glyceraldehyde 3-phosphate dehydrogenase; glycolyt	92.42
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	92.41
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	92.41
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	92.41
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	92.4
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	92.4
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	92.37
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	92.34
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	92.34
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	92.32
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	92.3
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	92.3
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	92.24
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	92.21
2d59_A	144	Hypothetical protein PH1109; COA binding, structur	92.21
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	92.2
2ywr_A	216	Phosphoribosylglycinamide formyltransferase; rossm	92.18
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	92.15
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	92.15
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	92.14
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	92.14
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	92.13
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	92.12
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	92.08
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	92.04
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	92.04
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	92.03
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	92.02
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	92.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	91.99
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	91.98
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	91.92
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	91.9
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	91.89
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	91.87
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	91.86
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	91.84
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	91.83
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	91.82
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	91.82
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	91.81
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	91.81
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	91.8
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	91.8
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	91.79
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	91.71
4f6c_A	427	AUSA reductase domain protein; thioester reductase	91.71
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	91.7
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	91.69
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	91.69
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	91.65
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	91.64
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	91.63
1gad_O	330	D-glyceraldehyde-3-phosphate dehydrogenase; oxidor	91.56
1xkq_A	280	Short-chain reductase family member (5D234); parra	91.48
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	91.47
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	91.44
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	91.4
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	91.4
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	91.38
1xhl_A	297	Short-chain dehydrogenase/reductase family member	91.38
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	91.34
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	91.34
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	91.3
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	91.28
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	91.27
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	91.24
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	91.23
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	91.21
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	91.21
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	91.18
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	91.17
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	91.11
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	91.1
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	91.07
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	91.06
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	91.04
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	91.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	90.99
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	90.98
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	90.98
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	90.93
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	90.92
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	90.92
3cmc_O	334	GAPDH, glyceraldehyde-3-phosphate dehydrogenase; m	90.91
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	90.89
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	90.89
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	90.85
3imf_A	257	Short chain dehydrogenase; structural genomics, in	90.71
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	90.68
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	90.61
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	90.61
3ff4_A	122	Uncharacterized protein; structural genomics, PSI-	90.61
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	90.57
3gms_A	340	Putative NADPH:quinone reductase; structural genom	90.52
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	90.5
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	90.4
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	90.39
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	90.36
3dfu_A	232	Uncharacterized protein from 6-phosphogluconate de	90.36
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	90.35
3e5r_O	337	PP38, glyceraldehyde-3-phosphate dehydrogenase, cy	90.35
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	90.25
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	90.24
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	90.2
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	90.19
3rih_A	293	Short chain dehydrogenase or reductase; structural	90.12
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	90.11
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	90.1
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	90.06
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	90.05
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	90.02
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	89.96
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	89.91
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	89.85
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	89.81
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	89.72
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	89.63
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	89.6
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	89.54
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	89.52
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	89.51
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	89.42
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	89.4
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	89.38
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	89.34
1oi7_A	288	Succinyl-COA synthetase alpha chain; SCS, ligase,	89.28
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	89.26
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	89.21
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	89.19
4e7p_A	150	Response regulator; DNA binding, cytosol, transcri	89.07
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	89.07
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	89.02
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	88.99
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	88.96
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	88.93
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	88.76
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	88.72
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	88.63
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	88.55
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	88.49
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	88.35
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	88.24
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	88.18
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	88.05
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	87.92
1hdg_O	332	Holo-D-glyceraldehyde-3-phosphate dehydrogenase; o	87.73
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	87.61
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	87.61
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	87.59
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	87.53
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	87.44
1jkx_A	212	GART;, phosphoribosylglycinamide formyltransferase	87.28
2duw_A	145	Putative COA-binding protein; ligand binding prote	87.17
3tqr_A	215	Phosphoribosylglycinamide formyltransferase; purin	87.07
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	86.94
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	86.84
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	86.83
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	86.82
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	86.78
2q5c_A	196	NTRC family transcriptional regulator; structural	86.76
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	86.74
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	86.74
3p9x_A	211	Phosphoribosylglycinamide formyltransferase; struc	86.71
2yv2_A	297	Succinyl-COA synthetase alpha chain; COA-binding d	86.68
1j5p_A	253	Aspartate dehydrogenase; TM1643, structural genomi	86.63
1jfl_A	228	Aspartate racemase; alpha-beta structure, HOMO-dim	86.56
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	86.46
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	86.46
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	86.46
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	86.42
3kcq_A	215	Phosphoribosylglycinamide formyltransferase; struc	86.32
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	86.26
2d2i_A	380	Glyceraldehyde 3-phosphate dehydrogenase; rossmann	86.19
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	86.13
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	86.09
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	85.96
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	85.93
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	85.91
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	85.73
4ds3_A	209	Phosphoribosylglycinamide formyltransferase; struc	85.61
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	85.59
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	85.52
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	85.48
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	85.47
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	85.41
3keo_A	212	Redox-sensing transcriptional repressor REX; DNA b	85.06
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	84.98
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	84.9
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	84.69
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	84.52
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	84.51
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	84.42
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	84.4
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	84.33
3av3_A	212	Phosphoribosylglycinamide formyltransferase; struc	84.33
1meo_A	209	Phosophoribosylglycinamide formyltransferase; puri	84.26
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	83.96
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	83.51
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	83.5
1kjq_A	391	GART 2, phosphoribosylglycinamide formyltransferas	83.39
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	83.16
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	83.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	82.97
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	82.94
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	82.54
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	82.37
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	82.19
2dt5_A	211	AT-rich DNA-binding protein; REX, NADH, NAD, rossm	82.17
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	81.8
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	81.71
2yv1_A	294	Succinyl-COA ligase [ADP-forming] subunit alpha; C	81.65
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	81.58
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	81.19
3o1l_A	302	Formyltetrahydrofolate deformylase; structural gen	80.38
1id1_A	153	Putative potassium channel protein; RCK domain, E.	80.2

>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A

Probab=100.00  E-value=1.1e-136  Score=1019.32  Aligned_cols=294  Identities=47%  Similarity=0.751  Sum_probs=280.1

Q ss_pred             CCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCce
Q 017567           73 WDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPE  152 (369)
Q Consensus        73 ~~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~  152 (369)
                      ..++|+|+|||||||||+||||||++|||+|+|+||+||+|+++|++||++|+|++|++.|++.+++|++.|...+.+++
T Consensus         6 ~~~~k~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aL~ag~nv~~L~~q~~~f~p~~v~v~d~~~~~~L~~~l~~~~~~~~   85 (406)
T 1q0q_A            6 HSGMKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTE   85 (406)
T ss_dssp             ---CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCE
T ss_pred             cCCceeEEEEccCcHHHHHHHHHHHhCCCccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhcCCCCcE
Confidence            36899999999999999999999999999999999999999999999999999999999999999999998821134689


Q ss_pred             EEecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeecccchhHHhhhcCCeEeecccchhhHH
Q 017567          153 ILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIF  232 (369)
Q Consensus       153 v~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~~~~IlPVDSEHsAIf  232 (369)
                      ++.|++|++++++.+++|+||+||||++||.||++||++||+||||||||||+||+|||++++++|++|+||||||||||
T Consensus        86 v~~G~~~l~~~a~~~~~D~Vv~AIvG~aGL~PTlaAi~aGK~iaLANKEsLV~aG~lv~~~a~~~~~~ilPVDSEHsAIf  165 (406)
T 1q0q_A           86 VLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIF  165 (406)
T ss_dssp             EEESHHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEECCHHHHHHHTHHHHHHHHHHTCEEEECSHHHHHHH
T ss_pred             EEeCHHHHHHHhcCCCCCEEEEccccHhHHHHHHHHHHCCCeEEEechHHHHhchHHHHHHHHHcCCeEEEecchHHHHH
Confidence            99999999999999899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             Hhh----cCC------CCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhhhhh
Q 017567          233 QCI----QGL------PEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHY  302 (369)
Q Consensus       233 Q~L----~g~------~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIEA~~  302 (369)
                      |||    +|.      +.++|+||||||||||||+|++|+|++|||+|||+||||+||+|||||||||||||||||||||
T Consensus       166 Q~L~~~~~g~~~~~~~~~~~V~kiiLTASGGPFR~~~~e~L~~vT~eqAl~HPnWsMG~KITIDSATmmNKGLEvIEA~~  245 (406)
T 1q0q_A          166 QSLPQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARW  245 (406)
T ss_dssp             HTSCHHHHTTTTTSCTGGGTEEEEEEEECCCTTTTSCGGGGGGCCHHHHHCCSSCCCCHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HHcccccCCccccccCCcccccEEEEECCCcccCCCCHHHHhCCCHHHHhcCCCccCCCeeeehHHhHHhhhHHHHHHHH
Confidence            999    886      5456999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCceeEEEcCCcceeeeEEeccCcEEEecCCCCchhHHHhccCCCCccccCCCCCCCCCCCC
Q 017567          303 LFGAEYDNIEIIIHPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSK  369 (369)
Q Consensus       303 LF~i~~d~IevvIHPqSiIHsmVef~DGSv~Aql~~PDMrlPI~yAL~yP~R~~~~~~~~~~ldl~~  369 (369)
                      |||+|||+|||||||||||||||||.|||++||||+||||+||+|||+||+|.+   ...++|||.+
T Consensus       246 LF~~~~d~I~VvVHPQSiIHSmVef~DGSv~AQlg~PDMrlPIayAL~~P~R~~---~~~~~lDl~~  309 (406)
T 1q0q_A          246 LFNASASQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDMRTPIAHTMAWPNRVN---SGVKPLDFCK  309 (406)
T ss_dssp             HHTCCGGGEEEEECTTCCEEEEEEETTSCEEEEECCSCTHHHHHHHHHTTSCCC---CSCCCCCTTT
T ss_pred             HcCCCHHHeEEEECCCCceeEEEEEcCCcEEEEeCCCCcHHHHHHHcCCccCCC---CCCCCCCCCc
Confidence            999999999999999999999999999999999999999999999999999995   4678899863

>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A

Probab=100.00  E-value=1.2e-134  Score=1002.11  Aligned_cols=284  Identities=44%  Similarity=0.712  Sum_probs=264.4

Q ss_pred             CCCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee-cCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCC
Q 017567           72 TWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA-GSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEK  150 (369)
Q Consensus        72 ~~~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa-g~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~  150 (369)
                      ..++||+|+|||||||||+||||||++|||+|+|+||+| |+|+++|++||++|+|++|++.|++.+++    .     +
T Consensus        17 ~~~~mk~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aLaa~g~nv~~L~~q~~~f~p~~v~v~d~~~~~~----~-----~   87 (398)
T 2y1e_A           17 RADGRLRVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGGAHLDTLLRQRAQTGVTNIAVADEHAAQR----V-----G   87 (398)
T ss_dssp             ---CCEEEEEESTTSHHHHHHHHHHHHCTTTEEEEEEEECSSCHHHHHHHHHHHCCCCEEESCHHHHHH----H-----C
T ss_pred             CcCCceEEEEEccCcHHHHHHHHHHHhCCCceEEEEEEecCCCHHHHHHHHHHcCCCEEEEcCHHHhhh----c-----C
Confidence            336689999999999999999999999999999999999 99999999999999999999999988765    1     2


Q ss_pred             ceEEecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeecccchhHHhhhcCCeEeecccchhh
Q 017567          151 PEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSA  230 (369)
Q Consensus       151 ~~v~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~~~~IlPVDSEHsA  230 (369)
                      ++++.|++|++++++.+++|+||+||||++||.||++||++||+|||||||||||||+|||+++++++  |+||||||||
T Consensus        88 ~~v~~G~~~l~~~a~~~~~D~Vv~AIvG~aGL~PTlaAi~aGK~iaLANKEsLV~aG~lv~~~a~~~~--ilPVDSEHsA  165 (398)
T 2y1e_A           88 DIPYHGSDAATRLVEQTEADVVLNALVGALGLRPTLAALKTGARLALANKESLVAGGSLVLRAARPGQ--IVPVDSEHSA  165 (398)
T ss_dssp             CCSEESTTHHHHHHHHSCCSEEEECCCSGGGHHHHHHHHHHTCEEEECCHHHHHHHTHHHHHHCCTTC--EEECSHHHHH
T ss_pred             CEEEecHHHHHHHhcCCCCCEEEEeCcCHHHHHHHHHHHHCCCceEEcccchheecHHHHHHHHHHcC--ceEecchHhH
Confidence            68999999999999988999999999999999999999999999999999999999999999999998  9999999999


Q ss_pred             HHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhhhhhhcCCCCCc
Q 017567          231 IFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDN  310 (369)
Q Consensus       231 IfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIEA~~LF~i~~d~  310 (369)
                      |||||+|.+.++|+||||||||||||+|++|+|++|||+|||+||||+||+||||||||||||||||||||||||+|||+
T Consensus       166 IfQ~L~g~~~~~V~kiiLTASGGPFR~~~~e~L~~vT~eqAl~HPnWsMG~KITIDSATmmNKGLEvIEA~~LF~~~~d~  245 (398)
T 2y1e_A          166 LAQCLRGGTPDEVAKLVLTASGGPFRGWSAADLEHVTPEQAGAHPTWSMGPMNTLNSASLVNKGLEVIETHLLFGIPYDR  245 (398)
T ss_dssp             HHHHGGGSCGGGEEEEEEEECCCTTTTCCHHHHTTCCTTTC-------CCHHHHHHHHHSHHHHHHHHHHHHHHCCCGGG
T ss_pred             HHHHhCCCCcccccEEEEECCccccCCCCHHHHhCCCHHHHhhCCCcccCceeeehhHhHhhhhHHHHHHHHHcCCCHHH
Confidence            99999997766799999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeEEEcCCcceeeeEEeccCcEEEecCCCCchhHHHhccCCCCccccCCCCCCCCCCCC
Q 017567          311 IEIIIHPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSK  369 (369)
Q Consensus       311 IevvIHPqSiIHsmVef~DGSv~Aql~~PDMrlPI~yAL~yP~R~~~~~~~~~~ldl~~  369 (369)
                      |||||||||||||||||.|||++||||+||||+||+|||+||+|.+   ...++|||.+
T Consensus       246 I~VvVHPQSiIHSmVef~DGSv~Aqlg~PDMrlPIayAL~~P~R~~---~~~~~lDl~~  301 (398)
T 2y1e_A          246 IDVVVHPQSIIHSMVTFIDGSTIAQASPPDMKLPISLALGWPRRVS---GAAAACDFHT  301 (398)
T ss_dssp             EEEEECTTCCEEEEEEETTSCEEEEECCSCTHHHHHHHHHTTSCCT---TSSCCCCTTS
T ss_pred             eEEEECCCCceeEEEEEeCCcEEEEeCCCCcHHHHHHHcCCccCCC---CCCCCCCcCC
Confidence            9999999999999999999999999999999999999999999995   4778999974

>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*

Probab=100.00  E-value=1.6e-134  Score=1016.97  Aligned_cols=295  Identities=44%  Similarity=0.761  Sum_probs=270.0

Q ss_pred             CCCCCCeeEEEEecCChHhHHHHHHHHh---CCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhc-
Q 017567           71 KTWDGPKPISVLGSTGSIGTQTLDIVAE---HEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALAN-  146 (369)
Q Consensus        71 ~~~~~~kkI~ILGSTGSIGtqTLdVI~~---~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~-  146 (369)
                      ....+||+|+|||||||||+||||||++   |||+|+|+||+||+|+++|++||++|+|++|++.|++.+++|++.|.. 
T Consensus        72 ~~~~~mk~I~ILGSTGSIGtqTLdVi~~~p~~pd~f~V~aLaAg~Nv~lL~eQ~~ef~P~~v~v~d~~~~~~L~~~l~~~  151 (488)
T 3au8_A           72 GAIKKPINVAIFGSTGSIGTNALNIIRECNKIENVFNVKALYVNKSVNELYEQAREFLPEYLCIHDKSVYEELKELVKNI  151 (488)
T ss_dssp             -----CEEEEEETTTSHHHHHHHHHHHHHHHHSCCEEEEEEEESSCHHHHHHHHHHHCCSEEEESCGGGTHHHHTGGGGS
T ss_pred             hhhhcceEEEEEccCcHHHHHHHHHHHcccCCCCeEEEEEEEcCCCHHHHHHHHHHcCCCEEEEcCHHHHHHHHHHhhhh
Confidence            3456789999999999999999999999   789999999999999999999999999999999999999999998853 


Q ss_pred             CCCCceEEecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeecccchhHHhhhc-CCeEeecc
Q 017567          147 VEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKH-NIKILPAD  225 (369)
Q Consensus       147 ~~~~~~v~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~-~~~IlPVD  225 (369)
                      .+.+++++.|++|++++++.+++|+||+||||++||.||++|+++||+||||||||||+||+|||++++++ |++|+|||
T Consensus       152 ~~~~~~v~~G~egl~e~a~~~~~D~Vv~AIvG~aGL~PTlaAi~aGK~IALANKESLV~aG~Lv~~~a~~~~g~~IlPVD  231 (488)
T 3au8_A          152 KDYKPIILCGDEGMKEICSSNSIDKIVIGIDSFQGLYSTMYAIMNNKIVALANKESIVSAGFFLKKLLNIHKNAKIIPVD  231 (488)
T ss_dssp             TTCCCEEEEHHHHHHHHHHCTTCCEEEECCCHHHHHHHHHHHHHTTCEEEECCSHHHHHHHHHHHHHHHHSTTCEEEECS
T ss_pred             cCCCceEEeCHHHHHHHhcCCCCCEEEEccccHhHHHHHHHHHHCCCcEEEecchhhhhchHHHHHHHHhcCCCeEEEec
Confidence            23468999999999999999999999999999999999999999999999999999999999999999999 99999999


Q ss_pred             cchhhHHHhhcCC-------------CCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcc
Q 017567          226 SEHSAIFQCIQGL-------------PEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFN  292 (369)
Q Consensus       226 SEHsAIfQ~L~g~-------------~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmN  292 (369)
                      ||||||||||+|+             +.++|+||||||||||||+|++|+|++|||+|||+||||+||+|||||||||||
T Consensus       232 SEHsAIFQcL~g~~~~~~~~~~~~~~~~~~V~kIiLTASGGPFR~~~~eeL~~VTpeqALkHPnWsMG~KITIDSATMmN  311 (488)
T 3au8_A          232 SEHSAIFQCLDNNKVLKTKCLQDNFSKINNINKIFLCSSGGPFQNLTMDELKNVTSENALKHPKWKMGKKITIDSATMMN  311 (488)
T ss_dssp             HHHHHHHHHSCHHHHTTSCTTCTTHHHHTTEEEEEEEECCCTTTTCCHHHHTTCCTTTC---------CHHHHHHHSSHH
T ss_pred             hhHHHHHHHhcCCcccccccccccccccccccEEEEECCCcccCCCCHHHHhCCCHHHHhcCCCccCCceeeeehHhHhh
Confidence            9999999999986             435699999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHhhhhhhcCCCCCceeEEEcCCcceeeeEEeccCcEEEecCCCCchhHHHhccCCCCccccCCCCCCCCCCC
Q 017567          293 KGLEVIEAHYLFGAEYDNIEIIIHPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLS  368 (369)
Q Consensus       293 KgLEvIEA~~LF~i~~d~IevvIHPqSiIHsmVef~DGSv~Aql~~PDMrlPI~yAL~yP~R~~~~~~~~~~ldl~  368 (369)
                      |||||||||||||+|||+|||||||||||||||||.|||++||||+||||+||+|||+||+|.+   ...++|||.
T Consensus       312 KGLEvIEA~~LF~v~~d~IeVvVHPQSIIHSmVef~DGSviAQlg~PDMRlPIayAL~yP~R~~---~~~~~LDl~  384 (488)
T 3au8_A          312 KGLEVIETHFLFDVDYNDIEVIVHKECIIHSCVEFIDKSVISQMYYPDMQIPILYSLTWPDRIK---TNLKPLDLA  384 (488)
T ss_dssp             HHHHHHHHHHHHTCCGGGEEEEECTTCCEEEEEEETTSCEEEEECSSCSHHHHHHHHHTTCCCC---CCCCCCCHH
T ss_pred             hhHHHhHHHHHcCCCHHHeEEEECCCCceeEEEEEeCCcEEEEeCCCCcHHHHHHHccCccCCC---CCCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999995   477889974

>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*

Probab=100.00  E-value=6.5e-120  Score=894.87  Aligned_cols=274  Identities=36%  Similarity=0.635  Sum_probs=262.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHH-HHHHHHhcCCCCceEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLD-EIKEALANVEEKPEIL  154 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~-~l~~~l~~~~~~~~v~  154 (369)
                      +|+|+|||||||||+|||||+++| |+|+|+||+||+|+++|++||++|+|++|++.|+..+. +|++          .+
T Consensus         3 ~k~i~ILGsTGSIG~~tldVi~~~-~~~~vvaL~a~~n~~~l~~q~~~f~p~~v~v~~~~~~~~~l~~----------~~   71 (376)
T 3a06_A            3 ERTLVILGATGSIGTQTLDVLKKV-KGIRLIGISFHSNLELAFKIVKEFNVKNVAITGDVEFEDSSIN----------VW   71 (376)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHS-CSEEEEEEEESSCHHHHHHHHHHHTCCEEEECSSCCCCCSSSE----------EE
T ss_pred             cceEEEECCCCHHHHHHHHHHHhC-CCeEEEEEEccCCHHHHHHHHHHcCCCEEEEccHHHHHHHHHH----------Hc
Confidence            389999999999999999999999 99999999999999999999999999999999988764 4432          37


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeecccchhHHhhhcCCeEeecccchhhHHHh
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQC  234 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~~~~IlPVDSEHsAIfQ~  234 (369)
                      .|++|++++++.+++|+|++||+|++||.||++|+++||+|+||||||||+||++++++++++|++|+||||||||||||
T Consensus        72 ~G~~~l~el~~~~~~D~Vv~AivG~aGL~ptlaAi~aGK~vaLANKEsLV~aG~li~~~a~~~g~~llPVDSEHsAifQ~  151 (376)
T 3a06_A           72 KGSHSIEEMLEALKPDITMVAVSGFSGLRAVLASLEHSKRVCLANKESLVCGGFLVKKKLKEKGTELIPVDSEHSAIFQV  151 (376)
T ss_dssp             ESTTHHHHHHHHHCCSEEEECCCSTTHHHHHHHHHHHCSEEEECCSHHHHHHHHHHHHHHHHHCCEEEECSHHHHHHHHH
T ss_pred             cCHHHHHHHhcCCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEeChHHHHhhHHHHHHHHHHcCCEEEEEccccCHHHHH
Confidence            89999999999889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhhhhhhcCCCCCceeEE
Q 017567          235 IQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEII  314 (369)
Q Consensus       235 L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIEA~~LF~i~~d~Ievv  314 (369)
                      |+    ++|+||||||||||||+|++++|++|||+|||+||||+||+|||||||||||||||+||||||||+|||+|+||
T Consensus       152 L~----~~v~kiiLTASGGpFr~~~~~~l~~vt~~~Al~HPnW~MG~KITiDSATmmNKGlEvIEA~wLF~~~~~~I~vv  227 (376)
T 3a06_A          152 ME----PEVEKVVLTASGGALRDWKISKIDRARPEDVLKHPVWNMGARITVDSATMVNKAFEVLEAMELFELPFEKIEVK  227 (376)
T ss_dssp             CC----SSCSEEEEEECCCTTSSSCHHHHTTCCGGGTCCCSSCCCCHHHHHHHHHTHHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred             HH----hhhceEEEeccCCcccCCCHHHHhhCCHHHhccCCCCCCCCeEEecHHHHHHHHHHHHHHHHHcCCChheEEEE
Confidence            98    35999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EcCCcceeeeEEeccCcEEEecCCCCchhHHHhccCCCCccccCCCCCCCCCCCC
Q 017567          315 IHPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLSK  369 (369)
Q Consensus       315 IHPqSiIHsmVef~DGSv~Aql~~PDMrlPI~yAL~yP~R~~~~~~~~~~ldl~~  369 (369)
                      |||||||||||||.|||++||||+||||+||+|||+||+|.     ..++|||.+
T Consensus       228 vHpqSiIHsmVef~DGsv~Aqlg~pDMr~PIayaL~~P~R~-----~~~~lD~~~  277 (376)
T 3a06_A          228 IHREGLVHGAVVLPDGNVKMVVSPPDMRIPISYALFYPRRV-----ALEPFFLRT  277 (376)
T ss_dssp             ECTTCCEEEEEECTTSCEEEEECCSCTHHHHHHHHHTTSCC-----CSCCCCCCC
T ss_pred             ECCCCeEEEEEEEcCCcEEEEcCCCccHHHHHHHhCCcccc-----CCccCCccc
Confidence            99999999999999999999999999999999999999998     457888863

>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*

Probab=100.00  E-value=4.6e-108  Score=814.51  Aligned_cols=288  Identities=47%  Similarity=0.765  Sum_probs=271.7

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEE
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      +|+||+|||||||||+|||+|+++|||+|+|+||++++|+++|.+|+++|+|++|++.|++.+.++++.+.+  .+++++
T Consensus         3 ~m~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag~ni~~l~~~~~~f~~~~v~v~d~~~~~~l~~~l~~--~~~~v~   80 (388)
T 1r0k_A            3 QPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAG--SSVEAA   80 (388)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTT--CSSEEE
T ss_pred             CceEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcCCCHHHHHHHHHHcCCcEEEEcChHHHHHHHHHhcc--CCcEEE
Confidence            468999999999999999999999999999999999999999999999999999999999999999988853  457899


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeecccchhHHhhhcCCeEeecccchhhHHHh
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQC  234 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~~~~IlPVDSEHsAIfQ~  234 (369)
                      .|+++++++++.+ +|+||+||+|.+||.||++|+++||+|+|||||+||++|++++++|+++|++++||||||+|||||
T Consensus        81 ~g~~~~~el~~~~-iDvVV~ai~G~aGl~ptlaAi~aGK~VvlANKE~lv~~G~~l~~~A~~~gv~liPVDseh~Ai~q~  159 (388)
T 1r0k_A           81 AGADALVEAAMMG-ADWTMAAIIGCAGLKATLAAIRKGKTVALANKESLVSAGGLMIDAVREHGTTLLPVDSEHNAIFQC  159 (388)
T ss_dssp             ESHHHHHHHHTSC-CSEEEECCCSGGGHHHHHHHHHTTSEEEECCSHHHHTTHHHHHHHHHHHTCEEEECSHHHHHHHHH
T ss_pred             eCccHHHHHHcCC-CCEEEEeCCCHHHHHHHHHHHHCCCEEEEeCcHHHHhhHHHHHHHHHHcCCEEEEechhHHHHHHH
Confidence            9999999999988 999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhhhhhhcCCCCCceeEE
Q 017567          235 IQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEII  314 (369)
Q Consensus       235 L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIEA~~LF~i~~d~Ievv  314 (369)
                      |.|....+|++|+|||||||||+|+++++.++||+|||+||||+||+|||||||||||||||+||||||||+|+|+|+||
T Consensus       160 L~g~~i~~v~~IilTaSGGpfr~~~~~~l~~vt~~~Al~hp~W~mG~KitiDSAtm~NkglevIEa~~Lf~~~~~~I~vv  239 (388)
T 1r0k_A          160 FPHHNRDYVRRIIITASGGPFRTTSLAEMATVTPERAVQHPNWSMGAKISIDSATMMNKGLELIEAFHLFQIPLEKFEIL  239 (388)
T ss_dssp             CCTTCGGGEEEEEEEECCCTTTTCCHHHHTTCCHHHHHC------CHHHHHHHHHTHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred             hhCCCccceeEEEEEeecccccCCCHHHHhcCCHHHhccCCCCCCcchhhhHHHHHHcCcCccccccccCCCCHHHeeee
Confidence            99977667999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EcCCcceeeeEEeccCcEEEecCCCCchhHHHhccCCCCccccCCCCCCCCCCC
Q 017567          315 IHPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSELTWPRLDLS  368 (369)
Q Consensus       315 IHPqSiIHsmVef~DGSv~Aql~~PDMrlPI~yAL~yP~R~~~~~~~~~~ldl~  368 (369)
                      |||||||||||||.|||++||||+||||+||+|||+||+|.+   ...++|||.
T Consensus       240 vhpqsiihsmV~f~dGsv~aql~~pdMr~pi~~al~~p~r~~---~~~~~ld~~  290 (388)
T 1r0k_A          240 VHPQSVIHSMVEYLDGSILAQIGSPDMRTPIGHTLAWPKRME---TPAESLDFT  290 (388)
T ss_dssp             ECTTCCEEEEEEETTSCEEEEECCSCTHHHHHHHHHTTSCCC---CCCCCCCHH
T ss_pred             echhHeeEEEEEEcCCcEEEecCCCccHHHHHHHcCCccccc---ccccccCcc
Confidence            999999999999999999999999999999999999999995   467889874

>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*

Probab=98.90  E-value=7.5e-09  Score=104.78  Aligned_cols=154  Identities=18%  Similarity=0.226  Sum_probs=119.4

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh-CC-CEEEEcCchhHHHHHHHHhcCCCCc
Q 017567           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF-KP-QVVAVRNESLLDEIKEALANVEEKP  151 (369)
Q Consensus        74 ~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F-kP-~~V~v~de~~~~~l~~~l~~~~~~~  151 (369)
                      +.+.||+|+|+ |.||+.-++.+.+.| .++|+|++ ..|.++..+.++++ .+ ..+...+  ...++.+++..  ..+
T Consensus        21 ~k~IRVGIIGa-G~iG~~~~~~l~~~~-~veLvAV~-D~~~era~~~a~~~yG~~~~~~~~~--~~~~i~~a~~~--g~~   93 (446)
T 3upl_A           21 GKPIRIGLIGA-GEMGTDIVTQVARMQ-GIEVGALS-ARRLPNTFKAIRTAYGDEENAREAT--TESAMTRAIEA--GKI   93 (446)
T ss_dssp             TCCEEEEEECC-SHHHHHHHHHHTTSS-SEEEEEEE-CSSTHHHHHHHHHHHSSSTTEEECS--SHHHHHHHHHT--TCE
T ss_pred             CCceEEEEECC-hHHHHHHHHHHhhCC-CcEEEEEE-eCCHHHHHHHHHHhcCCcccccccc--chhhhhhhhcc--CCc
Confidence            45679999999 999999999998865 59999977 55788888888776 53 2222221  12334443321  123


Q ss_pred             eEEecHHHHHHHhcCCCCCEEEEeccCc-cCcHHHHHHHHcCCceeeecccceeecccchhHHhhhcCCeEeecccc-hh
Q 017567          152 EILAGEQGVIEAARHPDAVTVVTGIVGC-AGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSE-HS  229 (369)
Q Consensus       152 ~v~~G~~gl~~~~~~~~~D~Vv~AIvG~-aGL~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~~~~IlPVDSE-Hs  229 (369)
                      .++   +...++++.+++|.|+.+.... .+...+++|+++||.|..+|||..+.-|+.+.++|+++|+.+.++|++ ++
T Consensus        94 ~v~---~D~eeLL~d~dIDaVviaTp~p~~H~e~a~~AL~AGKHVv~~nk~l~~~eg~eL~~~A~e~Gvvl~~~~gdqp~  170 (446)
T 3upl_A           94 AVT---DDNDLILSNPLIDVIIDATGIPEVGAETGIAAIRNGKHLVMMNVEADVTIGPYLKAQADKQGVIYSLGAGDEPS  170 (446)
T ss_dssp             EEE---SCHHHHHTCTTCCEEEECSCCHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCCEEECTTSHHH
T ss_pred             eEE---CCHHHHhcCCCCCEEEEcCCChHHHHHHHHHHHHcCCcEEecCcccCHHHHHHHHHHHHHhCCeeeecCCcchH
Confidence            332   4567778888999999998764 688999999999999999999998999999999999999999999998 77


Q ss_pred             hHHHhhcC
Q 017567          230 AIFQCIQG  237 (369)
Q Consensus       230 AIfQ~L~g  237 (369)
                      ++.++++-
T Consensus       171 ~~~eLv~~  178 (446)
T 3upl_A          171 SCMELIEF  178 (446)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            88888873

>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}

Probab=98.75  E-value=2.6e-08  Score=96.52  Aligned_cols=161  Identities=17%  Similarity=0.196  Sum_probs=110.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhC-----CCceEEEEEeecCC--------HHHHHHHHHhhCCCEEEEcCchhHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEH-----EDKFRVVALAAGSN--------ITLLADQVKRFKPQVVAVRNESLLDEIKE  142 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~-----pd~F~VvaLaag~N--------v~lL~eQ~~~FkP~~V~v~de~~~~~l~~  142 (369)
                      +.||+|+| +|-||+..++.+.++     ..+++|++++..+.        .+.+.+..+++.+                
T Consensus         4 ~irVgIiG-~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~----------------   66 (325)
T 3ing_A            4 EIRIILMG-TGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGR----------------   66 (325)
T ss_dssp             EEEEEEEC-CSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSC----------------
T ss_pred             eEEEEEEc-CcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCC----------------
Confidence            34899999 999999999999884     26799999876431        2222222222210                


Q ss_pred             HHhcCCCCceEEecHHHHHHHhcCCCCCEEEEeccCccCc----HHHHHHHHcCCceeeecccceeecccchhHHhhhcC
Q 017567          143 ALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGL----KPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHN  218 (369)
Q Consensus       143 ~l~~~~~~~~v~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL----~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~~  218 (369)
                       +.    .. .+    ...+++..+++|+||.+.....+.    .-+.+|+++||.|..+||+.+..-|+-+.++|+++|
T Consensus        67 -~~----~~-~~----d~~e~l~~~~iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVtaNK~~la~~~~eL~~lA~~~g  136 (325)
T 3ing_A           67 -IS----DR-AF----SGPEDLMGEAADLLVDCTPASRDGVREYSLYRMAFESGMNVVTANKSGLANKWHDIMDSANQNS  136 (325)
T ss_dssp             -SC----SS-BC----CSGGGGTTSCCSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHT
T ss_pred             -CC----cc-cC----CHHHHhcCCCCCEEEECCCCccccchHHHHHHHHHHCCCeEEEcCchhHHHHHHHHHHHHHHcC
Confidence             00    00 01    124556678899999999887665    448899999999999999988888999999999999


Q ss_pred             CeEe---------ecccchhhHHHhhcCCCCCccceEE--EeecCCCCCCCChhhh-ccCCHHHhhc
Q 017567          219 IKIL---------PADSEHSAIFQCIQGLPEGALRRII--LTASGGAFRDWPVEKL-KEVKVADALK  273 (369)
Q Consensus       219 ~~Il---------PVDSEHsAIfQ~L~g~~~~~v~kii--LTASGGPFr~~~~e~l-~~vT~~dALk  273 (369)
                      +.++         |+-   +.|.++|.|.   .|.+|-  +..+    -+|=+.+| +..+.+|||+
T Consensus       137 ~~~~~Ea~vg~giPii---~~l~~~l~g~---~I~~i~Gi~nGT----~nyil~~m~~g~~f~~~l~  193 (325)
T 3ing_A          137 KYIRYEATVAGGVPLF---SVLDYSILPS---KVKRFRGIVSST----INYVIRNMANGRSLRDVVD  193 (325)
T ss_dssp             CCEECGGGSSTTSCCH---HHHHHTCTTC---CEEEEEEECCHH----HHHHHHHHHTTCCHHHHHH
T ss_pred             CeEEEEeeecccCHHH---HHHHHHhhCC---CeeEEEEEEEee----eeEEeecccCCCCHHHHHH
Confidence            9875         886   7899999774   455542  2222    11112333 2567777775

>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}

Probab=98.68  E-value=3e-08  Score=96.11  Aligned_cols=169  Identities=17%  Similarity=0.308  Sum_probs=111.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCC-------CceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHE-------DKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVE  148 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~p-------d~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~  148 (369)
                      |.||+|+| +|.||+..++.+.+++       .+++|++++..+ .+++.       +    + |.  .+.+......  
T Consensus         2 mirvgIiG-~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~-~~~~~-------~----i-d~--~~~~~~~~~~--   63 (327)
T 3do5_A            2 MIKIAIVG-FGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSK-SSISG-------D----F-SL--VEALRMKRET--   63 (327)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSS-CEEES-------S----C-CH--HHHHHHHHHH--
T ss_pred             cEEEEEEe-ccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCC-hHhcc-------c----c-CH--HHHHhhhccC--
Confidence            56899999 8999999999999874       579999987543 11110       0    0 00  0001100000  


Q ss_pred             CCceEEecHHHHHHHhcCCCCCEEEEeccCcc----CcHHHHHHHHcCCceeeecccceeecccchhHHhhhcCCeEe--
Q 017567          149 EKPEILAGEQGVIEAARHPDAVTVVTGIVGCA----GLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKIL--  222 (369)
Q Consensus       149 ~~~~v~~G~~gl~~~~~~~~~D~Vv~AIvG~a----GL~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~~~~Il--  222 (369)
                        ..+ +....+.++++.+++|+||.+..-..    +...+.+|+++||.|..+||+.+..-++-+.++|+++|+.++  
T Consensus        64 --~~~-~~~~d~~~ll~~~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g~~~~~e  140 (327)
T 3do5_A           64 --GML-RDDAKAIEVVRSADYDVLIEASVTRVDGGEGVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGVRLMYE  140 (327)
T ss_dssp             --SSC-SBCCCHHHHHHHSCCSEEEECCCCC----CHHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTCCEECG
T ss_pred             --ccc-cCCCCHHHHhcCCCCCEEEECCCCcccchhHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhCCcEEEE
Confidence              001 00124466676788999999996443    478899999999999999999998889999999999998775  


Q ss_pred             -------ecccchhhHHHhhcCCCCCccceEEEeecCCCCCCCChhhh--ccCCHHHhhc
Q 017567          223 -------PADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKL--KEVKVADALK  273 (369)
Q Consensus       223 -------PVDSEHsAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l--~~vT~~dALk  273 (369)
                             |+   .+.+-++|.+.+-..|+.|+   ||=  -+|-+.+|  +..+.+|||+
T Consensus       141 a~v~~g~Pi---i~~l~~~l~~~~I~~I~GIl---nGT--~nyilt~m~~~g~~f~~~l~  192 (327)
T 3do5_A          141 ATVGGAMPV---VKLAKRYLALCEIESVKGIF---NGT--CNYILSRMEEERLPYEHILK  192 (327)
T ss_dssp             GGSSTTSCC---HHHHHTTTTTSCEEEEEEEC---CHH--HHHHHHHHHHHCCCHHHHHH
T ss_pred             EEeeecCHH---HHHHHHHhhCCCccEEEEEE---CCC--cCcchhhcCcCCcCHHHHHH
Confidence                   44   35566666654433444433   331  34555666  4888888876

>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}

Probab=98.55  E-value=1.9e-07  Score=94.35  Aligned_cols=157  Identities=22%  Similarity=0.316  Sum_probs=111.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhC--------CCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEH--------EDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVE  148 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~--------pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~  148 (369)
                      .||+|+| +|.||+..++++++|        ..+++|++++. +|.++..+.+    +..                    
T Consensus        11 irIgIIG-~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d-~~~~~~~~~~----~~~--------------------   64 (444)
T 3mtj_A           11 IHVGLLG-LGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAV-RNLDKAEALA----GGL--------------------   64 (444)
T ss_dssp             EEEEEEC-CHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEEC-SCHHHHHHHH----TTC--------------------
T ss_pred             ccEEEEC-CCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEE-CCHHHhhhhc----ccC--------------------
Confidence            4899999 899999999999864        35788988765 4555432221    110                    


Q ss_pred             CCceEEecHHHHHHHhcCCCCCEEEEeccC-ccCcHHHHHHHHcCCceeeecccceeecccchhHHhhhcCCeE------
Q 017567          149 EKPEILAGEQGVIEAARHPDAVTVVTGIVG-CAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKI------  221 (369)
Q Consensus       149 ~~~~v~~G~~gl~~~~~~~~~D~Vv~AIvG-~aGL~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~~~~I------  221 (369)
                         .+.   ..+.++++.+++|+|+.++.| -.....+.+|+++||.|..+||..+..-|.-+.++|+++|+.+      
T Consensus        65 ---~~~---~d~~ell~d~diDvVve~tp~~~~h~~~~~~AL~aGKhVvtenkal~a~~~~eL~~~A~~~gv~l~~Ea~V  138 (444)
T 3mtj_A           65 ---PLT---TNPFDVVDDPEIDIVVELIGGLEPARELVMQAIANGKHVVTANKHLVAKYGNEIFAAAQAKGVMVTFEAAV  138 (444)
T ss_dssp             ---CEE---SCTHHHHTCTTCCEEEECCCSSTTHHHHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCCEECGGGS
T ss_pred             ---ccc---CCHHHHhcCCCCCEEEEcCCCchHHHHHHHHHHHcCCEEEECCcccCHHHHHHHHHHHHHhCCeEEEEEee
Confidence               111   123566777899999999998 6788889999999999999999777777899999999999988      


Q ss_pred             ---eecccchhhHHHhhcCCCCCccceEEEeecCCCCCCCChhhh--ccCCHHHhhc
Q 017567          222 ---LPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKL--KEVKVADALK  273 (369)
Q Consensus       222 ---lPVDSEHsAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l--~~vT~~dALk  273 (369)
                         +|+   ...+-++|.+..-..|+.|+   ||-  -+|-+.++  +..+.+|||+
T Consensus       139 ~~giPi---i~~LrelL~~~~Ig~I~GIl---nGT--~nyilt~m~~~g~~f~~~l~  187 (444)
T 3mtj_A          139 AGGIPI---IKALREGLTANRIEWLAGII---NGT--SNFILSEMRDKGAAFDDVLK  187 (444)
T ss_dssp             STTSCH---HHHHHTTTTTSCEEEEEEEC---CHH--HHHHHHHHHHHCCCHHHHHH
T ss_pred             eCChHH---HHHHHHHHhCCCCceEEEEE---cCC--cccccccCCCCCCCHHHHHH
Confidence               364   67777777765444455443   221  12333444  3677777775

>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}

Probab=98.53  E-value=3.1e-06  Score=79.88  Aligned_cols=203  Identities=13%  Similarity=0.131  Sum_probs=138.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      +.||+|+|+ |.||..-+..++++|+ ++|+++. ..|-+.+.+.+++|.++.  .                        
T Consensus         4 ~~rvgiiG~-G~~g~~~~~~l~~~~~-~~l~av~-d~~~~~~~~~a~~~g~~~--~------------------------   54 (344)
T 3euw_A            4 TLRIALFGA-GRIGHVHAANIAANPD-LELVVIA-DPFIEGAQRLAEANGAEA--V------------------------   54 (344)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCTT-EEEEEEE-CSSHHHHHHHHHTTTCEE--E------------------------
T ss_pred             ceEEEEECC-cHHHHHHHHHHHhCCC-cEEEEEE-CCCHHHHHHHHHHcCCce--e------------------------
Confidence            568999997 9999999999999865 9999974 567888888788776321  1                        


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccc-eeecccchhHHhhhcCCeEeec-----ccchh
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKET-LIAGGPFVLPLAHKHNIKILPA-----DSEHS  229 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEs-LV~aG~li~~~a~k~~~~IlPV-----DSEHs  229 (369)
                        ..+.++++.+++|.|+.+..-..-...+.+|+++||.|.+-.-=+ =+....-+.++++++|..+..-     +..+.
T Consensus        55 --~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~  132 (344)
T 3euw_A           55 --ASPDEVFARDDIDGIVIGSPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDGASKVMLGFNRRFDPSFA  132 (344)
T ss_dssp             --SSHHHHTTCSCCCEEEECSCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEECCGGGGCHHHH
T ss_pred             --CCHHHHhcCCCCCEEEEeCCchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEecchhhcCHHHH
Confidence              123456666789999999999999999999999999877532101 1123445677888888755432     45556


Q ss_pred             hHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhh-hhhhcCCCC
Q 017567          230 AIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFGAEY  308 (369)
Q Consensus       230 AIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIE-A~~LF~i~~  308 (369)
                      .+-++|+...-.+|..+..+.. .|..  +..              .|     ..-..+.|++-|.-.|. ++|||| ++
T Consensus       133 ~~k~~i~~g~iG~i~~v~~~~~-~~~~--~~~--------------~~-----~~~~gG~l~d~g~H~ld~~~~l~G-~~  189 (344)
T 3euw_A          133 AINARVANQEIGNLEQLVIISR-DPAP--APK--------------DY-----IAGSGGIFRDMTIHDLDMARFFVP-NI  189 (344)
T ss_dssp             HHHHHHHTTTTSSEEEEEEEEE-CSSC--CCH--------------HH-----HHHSCHHHHHTHHHHHHHHHHHCS-CE
T ss_pred             HHHHHHhcCCCCceEEEEEEec-CCCC--CCc--------------cc-----ccCCCceeecchhhHHHHHHHhcC-Cc
Confidence            6667776655567777666532 2211  111              12     01234667777755555 579999 88


Q ss_pred             CceeEEEc----C-------CcceeeeEEeccCcE
Q 017567          309 DNIEIIIH----P-------QSIIHSMVETQDSSV  332 (369)
Q Consensus       309 d~IevvIH----P-------qSiIHsmVef~DGSv  332 (369)
                      +++.....    |       .-..+.+++|.||.+
T Consensus       190 ~~v~a~~~~~~~~~~~~~~~~D~~~~~l~~~~G~~  224 (344)
T 3euw_A          190 VEVTATGANVFSQEIAEFNDYDQVIVTLRGSKGEL  224 (344)
T ss_dssp             EEEEEEEECSSCHHHHHTTCCSEEEEEEEETTSCE
T ss_pred             EEEEEEecccccccccccCCCceEEEEEEECCCcE
Confidence            88887652    2       234678999999864

>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*

Probab=98.52  E-value=7.1e-06  Score=77.59  Aligned_cols=200  Identities=17%  Similarity=0.204  Sum_probs=135.8

Q ss_pred             eeEEEEecCChHhHHHHHHHH-hCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVA-EHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~-~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .||+|+|+ |+||+.-+..++ ++| .++|++++ ..|-+++.+.+++|.......                        
T Consensus         3 ~rigiIG~-G~~g~~~~~~l~~~~~-~~~l~av~-d~~~~~~~~~~~~~g~~~~~~------------------------   55 (344)
T 3mz0_A            3 LRIGVIGT-GAIGKEHINRITNKLS-GAEIVAVT-DVNQEAAQKVVEQYQLNATVY------------------------   55 (344)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTCS-SEEEEEEE-CSSHHHHHHHHHHTTCCCEEE------------------------
T ss_pred             EEEEEECc-cHHHHHHHHHHHhhCC-CcEEEEEE-cCCHHHHHHHHHHhCCCCeee------------------------
Confidence            58999998 999999999998 554 59999975 567888888888887311111                        


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccc--eeecccchhHHhhhcCCeEeec------ccc
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKET--LIAGGPFVLPLAHKHNIKILPA------DSE  227 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEs--LV~aG~li~~~a~k~~~~IlPV------DSE  227 (369)
                        +.+.++++.+++|.|+.+..-..-...+.+|+++||.|.+- |=.  =+....-+.++|+++|..++=|      +..
T Consensus        56 --~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~Gk~vl~E-KP~a~~~~e~~~l~~~a~~~g~~~~~v~~~~r~~p~  132 (344)
T 3mz0_A           56 --PNDDSLLADENVDAVLVTSWGPAHESSVLKAIKAQKYVFCE-KPLATTAEGCMRIVEEEIKVGKRLVQVGFMRRYDSG  132 (344)
T ss_dssp             --SSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEC-SCSCSSHHHHHHHHHHHHHHSSCCEEECCGGGGSHH
T ss_pred             --CCHHHHhcCCCCCEEEECCCchhHHHHHHHHHHCCCcEEEc-CCCCCCHHHHHHHHHHHHHHCCEEEEEecccccCHH
Confidence              12345666678999999999999999999999999987652 211  1123445677888888877433      455


Q ss_pred             hhhHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCC-CCCCCCccceehhhhcchhHHHhh-hhhhcC
Q 017567          228 HSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHP-NWSMGKKITVDSATLFNKGLEVIE-AHYLFG  305 (369)
Q Consensus       228 HsAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP-~W~MG~KITIDSATmmNKgLEvIE-A~~LF~  305 (369)
                      +..+-++++...-.+|..+...- ..|..                  | .|. |      .+.|++-|.-.|. ++||||
T Consensus       133 ~~~~k~~i~~g~iG~i~~v~~~~-~~~~~------------------~~~w~-g------gg~l~d~g~H~id~~~~l~G  186 (344)
T 3mz0_A          133 YVQLKEALDNHVIGEPLMIHCAH-RNPTV------------------GDNYT-T------DMAVVDTLVHEIDVLHWLVN  186 (344)
T ss_dssp             HHHHHHHHHTTTTSSEEEEEEEE-ECSCC------------------CTTCC-T------THHHHTTTHHHHHHHHHHHT
T ss_pred             HHHHHHHHHcCCCCCcEEEEEEe-cCCCC------------------Ccccc-C------CchhhhhhhHHHHHHHHhcC
Confidence            56666666655555666555432 12211                  2 365 2      3457777765555 579999


Q ss_pred             CCCCceeEEEcC---------CcceeeeEEeccCcE
Q 017567          306 AEYDNIEIIIHP---------QSIIHSMVETQDSSV  332 (369)
Q Consensus       306 i~~d~IevvIHP---------qSiIHsmVef~DGSv  332 (369)
                      -+++++......         +-..+.+++|.||.+
T Consensus       187 ~~~~~V~a~~~~~~~~~~~~~~D~~~~~l~~~~G~~  222 (344)
T 3mz0_A          187 DDYESVQVIYPKKSKNALPHLKDPQIVVIETKGGIV  222 (344)
T ss_dssp             CCEEEEEEECCSCCTTSCTTCCCSEEEEEEETTCCE
T ss_pred             CCcEEEEEEEeccccccCCCCCceEEEEEEECCCCE
Confidence            767777665322         235678999999864

>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X

Probab=98.52  E-value=7.9e-06  Score=76.97  Aligned_cols=207  Identities=14%  Similarity=0.185  Sum_probs=136.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCC-ceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHED-KFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd-~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      +.||+|+| +|.||..-+..+++.|+ +++|+|++ ..|.++..+.+++|....+.                        
T Consensus         2 ~~rigiiG-~G~ig~~~~~~l~~~~~~~~~l~av~-d~~~~~a~~~a~~~~~~~~~------------------------   55 (334)
T 3ohs_X            2 ALRWGIVS-VGLISSDFTAVLQTLPRSEHQVVAVA-ARDLSRAKEFAQKHDIPKAY------------------------   55 (334)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHTTSCTTTEEEEEEE-CSSHHHHHHHHHHHTCSCEE------------------------
T ss_pred             ccEEEEEC-chHHHHHHHHHHHhCCCCCeEEEEEE-cCCHHHHHHHHHHcCCCccc------------------------
Confidence            35899999 79999999999999886 69999975 56788888778877642211                        


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccce--eecccchhHHhhhcCCeEeec-----ccc
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILPA-----DSE  227 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsL--V~aG~li~~~a~k~~~~IlPV-----DSE  227 (369)
                         ..+.++++.+++|.|+.+..-..-..-+.+|+++||.|.+- |=.-  +.-..-+.++|+++|..+.--     +..
T Consensus        56 ---~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~~GkhVl~E-KP~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~~p~  131 (334)
T 3ohs_X           56 ---GSYEELAKDPNVEVAYVGTQHPQHKAAVMLCLAAGKAVLCE-KPMGVNAAEVREMVTEARSRGLFLMEAIWTRFFPA  131 (334)
T ss_dssp             ---SSHHHHHHCTTCCEEEECCCGGGHHHHHHHHHHTTCEEEEE-SSSSSSHHHHHHHHHHHHHTTCCEEEECGGGGSHH
T ss_pred             ---CCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEE-CCCCCCHHHHHHHHHHHHHhCCEEEEEEhHhcCHH
Confidence               12356666778999999999988899999999999987642 2111  122445677888888766532     333


Q ss_pred             hhhHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhh-hhhhcC-
Q 017567          228 HSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFG-  305 (369)
Q Consensus       228 HsAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIE-A~~LF~-  305 (369)
                      +..+-+.|+...-.+|..+-.+-+ -+..+.++  .           -+|..|      .+.|++-|.-.|. ++|||| 
T Consensus       132 ~~~~k~~i~~g~iG~i~~v~~~~~-~~~~~~~~--~-----------~~~~~g------GG~l~d~g~H~id~~~~l~G~  191 (334)
T 3ohs_X          132 SEALRSVLAQGTLGDLRVARAEFG-KNLTHVPR--A-----------VDWAQA------GGALLDLGIYCVQFISMVFGG  191 (334)
T ss_dssp             HHHHHHHHHHTTTCSEEEEEEEEE-CCCTTCHH--H-----------HCTTTT------CSHHHHTHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHhcCCCCCeEEEEEEcc-CCCCCcCc--C-----------CCcccC------CCCHHHhhhHHHHHHHHHhCC
Confidence            445555555444456666554432 12111110  0           124444      3677777765555 689999 


Q ss_pred             CCCCceeEEEc--C---CcceeeeEEeccCcE
Q 017567          306 AEYDNIEIIIH--P---QSIIHSMVETQDSSV  332 (369)
Q Consensus       306 i~~d~IevvIH--P---qSiIHsmVef~DGSv  332 (369)
                      -+++++...-.  +   .-..+.+++|.||.+
T Consensus       192 ~~p~~v~a~~~~~~~~~~d~~~~~l~~~~G~~  223 (334)
T 3ohs_X          192 QKPEKISVMGRRHETGVDDTVTVLLQYPGEVH  223 (334)
T ss_dssp             CCCSEEEEEEEECTTSSEEEEEEEEEETTTEE
T ss_pred             CCCeEEEEEEEECCCCcceEEEEEEEeCCCCE
Confidence            66777776543  2   235678889998864

>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}

Probab=98.51  E-value=2.2e-06  Score=82.04  Aligned_cols=212  Identities=15%  Similarity=0.144  Sum_probs=137.7

Q ss_pred             CeeEEEEecCChHhHH-HH----HHHHhCCCceEEEE--------EeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQ-TL----DIVAEHEDKFRVVA--------LAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKE  142 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtq-TL----dVI~~~pd~F~Vva--------Laag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~  142 (369)
                      +.||+|+|++|++|+. -+    ..+++.+. +++++        ..+..|.++..+.+++|....+.            
T Consensus         6 ~irigiiG~~G~~g~~~h~~~~~~~~~~~~~-~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~~~~~------------   72 (383)
T 3oqb_A            6 RLGLIMNGVTGRMGLNQHLIRSIVAIRDQGG-VRLKNGDRIMPDPILVGRSAEKVEALAKRFNIARWT------------   72 (383)
T ss_dssp             EEEEEEESTTSTHHHHTTTTTTHHHHHHHTS-EECTTSCEEEEEEEEECSSSHHHHHHHHHTTCCCEE------------
T ss_pred             eeEEEEEeccchhhhhhhHHHHHHHHhhcCc-eeecCCcccceeeEEEcCCHHHHHHHHHHhCCCccc------------
Confidence            4589999999999996 66    77776653 32220        34456777777777777542111            


Q ss_pred             HHhcCCCCceEEecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccc--eeecccchhHHhhhcCCe
Q 017567          143 ALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKET--LIAGGPFVLPLAHKHNIK  220 (369)
Q Consensus       143 ~l~~~~~~~~v~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEs--LV~aG~li~~~a~k~~~~  220 (369)
                                     ..+.++++.+++|.|+.+..-..-..-+.+|+++||.|. ..|=.  -+.-+.-+.++|+++|+.
T Consensus        73 ---------------~~~~~ll~~~~iD~V~i~tp~~~h~~~~~~al~~Gk~V~-~EKP~a~~~~~~~~l~~~a~~~~~~  136 (383)
T 3oqb_A           73 ---------------TDLDAALADKNDTMFFDAATTQARPGLLTQAINAGKHVY-CEKPIATNFEEALEVVKLANSKGVK  136 (383)
T ss_dssp             ---------------SCHHHHHHCSSCCEEEECSCSSSSHHHHHHHHTTTCEEE-ECSCSCSSHHHHHHHHHHHHHTTCC
T ss_pred             ---------------CCHHHHhcCCCCCEEEECCCchHHHHHHHHHHHCCCeEE-EcCCCCCCHHHHHHHHHHHHHcCCe
Confidence                           124566667789999999888888889999999999976 77833  333566678899999876


Q ss_pred             Eeec-----ccchhhHHHhhcCCCCCccceEEEeec----CCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhc
Q 017567          221 ILPA-----DSEHSAIFQCIQGLPEGALRRIILTAS----GGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLF  291 (369)
Q Consensus       221 IlPV-----DSEHsAIfQ~L~g~~~~~v~kiiLTAS----GGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmm  291 (369)
                      +...     +..+.++-+.|+...-.+|..+-.+-+    .|+++.              -..|+|..-+.  -..+.|+
T Consensus       137 ~~v~~~~r~~p~~~~~~~~i~~g~iG~i~~~~~~~~~~~~~~~~~~--------------~~~~~w~~~~~--~ggG~l~  200 (383)
T 3oqb_A          137 HGTVQDKLFLPGLKKIAFLRDSGFFGRILSVRGEFGYWVFEGGWQE--------------AQRPSWNYRDE--DGGGIIL  200 (383)
T ss_dssp             EEECCGGGGSHHHHHHHHHHHTTTTSSEEEEEEEEECCCCCSSSSC--------------CSSCGGGGCTT--TTCCHHH
T ss_pred             EEEEeccccCHHHHHHHHHHHcCCCCCcEEEEEEeccccccccccc--------------cCCCCcccccc--cCCceee
Confidence            5432     333445555555544455655544431    122210              13467764322  2356788


Q ss_pred             chhHHHhh-hhhhcCCCCCceeEEEcC-----------------CcceeeeEEeccCcEE
Q 017567          292 NKGLEVIE-AHYLFGAEYDNIEIIIHP-----------------QSIIHSMVETQDSSVI  333 (369)
Q Consensus       292 NKgLEvIE-A~~LF~i~~d~IevvIHP-----------------qSiIHsmVef~DGSv~  333 (369)
                      +-|.-.|. ++|||| +++.+......                 +-..+.+++|.||.+.
T Consensus       201 d~g~H~id~~~~l~G-~~~~v~a~~~~~~~~~~~~~g~~~~~~~~D~~~~~l~~~~G~~~  259 (383)
T 3oqb_A          201 DMVCHWRYVLDNLFG-NVQSVVCIGNTDIPERFDEQGKKYKATADDSAYATFQLEGGVIA  259 (383)
T ss_dssp             HHHHHHHHHHHHHTC-CEEEEEEEEECSCSEEECTTSCEEECCSCCEEEEEEEETTTEEE
T ss_pred             ehhhHHHHHHHHHcC-CCeEEEEEEeecccccccCCCceeccccCCcEEEEEEeCCCCEE
Confidence            88876665 689999 77777766531                 2467889999998653

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=98.46  E-value=7.5e-06  Score=77.72  Aligned_cols=212  Identities=13%  Similarity=0.193  Sum_probs=140.2

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEE
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      .+.||+|+|+ |.||..-+..++++++.++|++++ ..|-+.+.+.+++|..+  ...                      
T Consensus        12 ~~~rvgiiG~-G~~g~~~~~~l~~~~~~~~lvav~-d~~~~~~~~~~~~~~~~--~~~----------------------   65 (354)
T 3q2i_A           12 RKIRFALVGC-GRIANNHFGALEKHADRAELIDVC-DIDPAALKAAVERTGAR--GHA----------------------   65 (354)
T ss_dssp             SCEEEEEECC-STTHHHHHHHHHHTTTTEEEEEEE-CSSHHHHHHHHHHHCCE--EES----------------------
T ss_pred             CcceEEEEcC-cHHHHHHHHHHHhCCCCeEEEEEE-cCCHHHHHHHHHHcCCc--eeC----------------------
Confidence            4579999998 999999999999986789999975 45778877777777631  111                      


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccce-eecccchhHHhhhcCCeEeec-----ccch
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL-IAGGPFVLPLAHKHNIKILPA-----DSEH  228 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsL-V~aG~li~~~a~k~~~~IlPV-----DSEH  228 (369)
                          .+.++++.+++|.|+.+..-..-..-+.+|+++||.|.+-.-=++ +..+.-+.++++++|..+...     +..+
T Consensus        66 ----~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~  141 (354)
T 3q2i_A           66 ----SLTDMLAQTDADIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNATL  141 (354)
T ss_dssp             ----CHHHHHHHCCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSHHH
T ss_pred             ----CHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEEcccCCHHH
Confidence                224455556799999998887778889999999998875321111 223556778888888877532     2234


Q ss_pred             hhHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhh-hhhhcCCC
Q 017567          229 SAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFGAE  307 (369)
Q Consensus       229 sAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIE-A~~LF~i~  307 (369)
                      ..+-+.++...-.+|..+-.+....    .+..         -...+.|..-.+-  +.+.|++-|--.|. ++|||| +
T Consensus       142 ~~~k~~i~~g~iG~i~~v~~~~~~~----~~~~---------~~~~~~w~~~~~~--~gG~l~d~g~H~ld~~~~l~G-~  205 (354)
T 3q2i_A          142 QLLKRAMQEKRFGRIYMVNVNVFWT----RPQE---------YYDAAGWRGTWEF--DGGAFMNQASHYVDLLDWLIG-P  205 (354)
T ss_dssp             HHHHHHHHTTTTCSEEEEEEEEECB----CCHH---------HHHTSTTTTCTTT--TCCCCCCCTHHHHHHHHHHHC-C
T ss_pred             HHHHHHHhcCCCCceEEEEEEEEEe----cCch---------hccccCccccccC--CCchhhhhhhHHHHHHHHhcC-C
Confidence            4455556554555666655544211    1111         1122345432222  26778888776666 489999 8


Q ss_pred             CCceeEEEcC-------CcceeeeEEeccCcE
Q 017567          308 YDNIEIIIHP-------QSIIHSMVETQDSSV  332 (369)
Q Consensus       308 ~d~IevvIHP-------qSiIHsmVef~DGSv  332 (369)
                      ++.+......       +-..+.+++|.||.+
T Consensus       206 ~~~v~a~~~~~~~~~~~~d~~~~~l~~~~G~~  237 (354)
T 3q2i_A          206 VESVQAYTATLARNIEVEDTGTVSVKWRSGAL  237 (354)
T ss_dssp             EEEEEEEEECSSSSSSSCSEEEEEEEETTSCE
T ss_pred             ceEEEEEeeccCCCCCccceeEEEEEECCCCE
Confidence            8888877642       335788999999864

>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}

Probab=98.38  E-value=7.3e-06  Score=77.37  Aligned_cols=208  Identities=13%  Similarity=0.138  Sum_probs=139.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      +.||+|+|+ |.||..-+..++++| .++|++++. .|.+.+.+.+++|....+                        + 
T Consensus         5 ~~~igiiG~-G~~g~~~~~~l~~~~-~~~l~av~d-~~~~~~~~~~~~~~~~~~------------------------~-   56 (330)
T 3e9m_A            5 KIRYGIMST-AQIVPRFVAGLRESA-QAEVRGIAS-RRLENAQKMAKELAIPVA------------------------Y-   56 (330)
T ss_dssp             CEEEEECSC-CTTHHHHHHHHHHSS-SEEEEEEBC-SSSHHHHHHHHHTTCCCC------------------------B-
T ss_pred             eEEEEEECc-hHHHHHHHHHHHhCC-CcEEEEEEe-CCHHHHHHHHHHcCCCce------------------------e-
Confidence            468999997 999999999999885 499998754 566777777776653111                        0 


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccce-eecccchhHHhhhcCCeEee-----cccchh
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL-IAGGPFVLPLAHKHNIKILP-----ADSEHS  229 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsL-V~aG~li~~~a~k~~~~IlP-----VDSEHs  229 (369)
                        ..+.++++.+++|.|+.+..-..-...+.+|+++||.|.+-.-=++ +.-..-+.++++++|..+..     -+..+.
T Consensus        57 --~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~  134 (330)
T 3e9m_A           57 --GSYEELCKDETIDIIYIPTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEAQKSVFLPITQ  134 (330)
T ss_dssp             --SSHHHHHHCTTCSEEEECCCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEECCSGGGCHHHH
T ss_pred             --CCHHHHhcCCCCCEEEEcCCCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEEhhhhCHHHH
Confidence              1335566667899999999999889999999999998765321011 12234567788888876653     344455


Q ss_pred             hHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhh-hhhhcCCCC
Q 017567          230 AIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFGAEY  308 (369)
Q Consensus       230 AIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIE-A~~LF~i~~  308 (369)
                      .+-++++...-.+|..+-.+-+. |.                -..+.|..-+..  ..+.|++-|.-.|. ++||||-++
T Consensus       135 ~~k~~i~~g~iG~i~~i~~~~~~-~~----------------~~~~~w~~~~~~--ggG~l~d~g~H~id~~~~l~G~~~  195 (330)
T 3e9m_A          135 KVKATIQEGGLGEILWVQSVTAY-PN----------------VDHIPWFYSREA--GGGALHGSGSYPLQYLQYVLGKEI  195 (330)
T ss_dssp             HHHHHHHTTTTCSEEEEEEEEEE-SC----------------CTTCGGGGCTTT--TCSHHHHHSHHHHHHHHHHHTCCE
T ss_pred             HHHHHHhCCCCCCeEEEEEEecc-cC----------------CCCcCcccCccc--CCCHHHHhhHHHHHHHHHHhCCCc
Confidence            66666665555667766665543 22                123456433322  35678887755554 689999877


Q ss_pred             CceeEEEcC-----CcceeeeEEeccCcE
Q 017567          309 DNIEIIIHP-----QSIIHSMVETQDSSV  332 (369)
Q Consensus       309 d~IevvIHP-----qSiIHsmVef~DGSv  332 (369)
                      +++....+.     +-..+.+++|.||.+
T Consensus       196 ~~v~a~~~~~~~~~~d~~~~~l~~~~G~~  224 (330)
T 3e9m_A          196 QEVTGTATYQQGATDSQCNLALKFAEGTL  224 (330)
T ss_dssp             EEEEEEEEECSSSCEEEEEEEEEETTTEE
T ss_pred             eEEEEEEEeCCCCcceEEEEEEEECCCCE
Confidence            887776532     235677889998854

>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A

Probab=98.38  E-value=1.1e-05  Score=79.81  Aligned_cols=215  Identities=12%  Similarity=0.132  Sum_probs=145.2

Q ss_pred             CeeEEEEec---CChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCce
Q 017567           76 PKPISVLGS---TGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPE  152 (369)
Q Consensus        76 ~kkI~ILGS---TGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~  152 (369)
                      +.||+|+|+   +|.||..-+..++++++.++|+|++ ..|.+++.+.+++|....+                      .
T Consensus        20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~-d~~~~~~~~~a~~~g~~~~----------------------~   76 (438)
T 3btv_A           20 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALY-SPKIETSIATIQRLKLSNA----------------------T   76 (438)
T ss_dssp             CEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEE-CSSHHHHHHHHHHTTCTTC----------------------E
T ss_pred             CCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEE-eCCHHHHHHHHHHcCCCcc----------------------e
Confidence            468999999   6999999999999985679999975 5678887777777754211                      1


Q ss_pred             EEecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcC------Cceeeecccce--eecccchhHHhhhcCCeEeec
Q 017567          153 ILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG------KDIALANKETL--IAGGPFVLPLAHKHNIKILPA  224 (369)
Q Consensus       153 v~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~g------K~iaLANKEsL--V~aG~li~~~a~k~~~~IlPV  224 (369)
                      ++   ..+.++++.+++|.|+.+..-..-..-+.+|+++|      |.|.+ -|-.-  +.-..-+.++|+++|..+..-
T Consensus        77 ~~---~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aG~~~~~~khVl~-EKP~a~~~~e~~~l~~~a~~~g~~~~v~  152 (438)
T 3btv_A           77 AF---PTLESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFV-EWALACSLDQAESIYKAAAERGVQTIIS  152 (438)
T ss_dssp             EE---SSHHHHHHCSSCSEEEECSCHHHHHHHHHHHHHHGGGCTTCCEEEE-ESSCCSSHHHHHHHHHHHHTTTCEEEEE
T ss_pred             ee---CCHHHHhcCCCCCEEEEeCCcHHHHHHHHHHHHCCCCcccceeEEe-cCcccCCHHHHHHHHHHHHHcCCeEEEe
Confidence            11   12355666678999999998888888899999999      88765 24221  122345677888888876644


Q ss_pred             -----ccchhhHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhh
Q 017567          225 -----DSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE  299 (369)
Q Consensus       225 -----DSEHsAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIE  299 (369)
                           +..+..+-+.|+...-.+|..+-.+..++.++....           ...++|..-+.  -..+.|++-|--.|.
T Consensus       153 ~~~R~~p~~~~~k~~i~~G~iG~i~~v~~~~~~~~~~~~~~-----------~~~~~w~~~~~--~gGG~l~d~g~H~lD  219 (438)
T 3btv_A          153 LQGRKSPYILRAKELISQGYIGDINSIEIAGNGGWYGYERP-----------VKSPKYIYEIG--NGVDLVTTTFGHTID  219 (438)
T ss_dssp             CGGGGCHHHHHHHHHHHTTTTCSEEEEEEEEECSSSSSEEE-----------TTSCGGGGSTT--SSCSTTTTHHHHHHH
T ss_pred             cccccCHHHHHHHHHHHcCCCCCcEEEEEEEccCccccccc-----------CCccccccccc--cCCCeeeeeeeeHHH
Confidence                 455666777777655567777766654433332110           12456754222  223567888766665


Q ss_pred             -hhhhcCCCCCceeEEEc---CC--------------------cceeeeEEeccC
Q 017567          300 -AHYLFGAEYDNIEIIIH---PQ--------------------SIIHSMVETQDS  330 (369)
Q Consensus       300 -A~~LF~i~~d~IevvIH---Pq--------------------SiIHsmVef~DG  330 (369)
                       ++||||-+++++.....   |+                    -..+.+++|.+|
T Consensus       220 l~~~l~G~~~~~V~a~~~~~~~~~~~~d~~~~~~g~~~~~~~~D~~~~~l~~~~G  274 (438)
T 3btv_A          220 ILQYMTSSYFSRINAMVFNNIPEQELIDERGNRLGQRVPKTVPDHLLFQGTLLNG  274 (438)
T ss_dssp             HHHHHHTCCEEEEEEEEECCCSEEEEECTTSCEEEEEEECCSCSEEEEEEEETTT
T ss_pred             HHHHHhCCCceEEEEEeeccCCccccccccccccccccCCCCCceEEEEEEECCC
Confidence             58999977777766653   22                    246678899998

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=98.37  E-value=1.1e-05  Score=75.83  Aligned_cols=210  Identities=10%  Similarity=0.062  Sum_probs=133.6

Q ss_pred             CCeeEEEEecCChHhHHHHHHHH-hCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceE
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVA-EHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI  153 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~-~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v  153 (369)
                      .+.||+|+|+ |.||..-+..++ +.+ .++|+++. ..|-+++.+.+++|....++ .                     
T Consensus         7 ~~~~v~iiG~-G~ig~~~~~~l~~~~~-~~~~vav~-d~~~~~~~~~a~~~g~~~~~-~---------------------   61 (346)
T 3cea_A            7 KPLRAAIIGL-GRLGERHARHLVNKIQ-GVKLVAAC-ALDSNQLEWAKNELGVETTY-T---------------------   61 (346)
T ss_dssp             CCEEEEEECC-STTHHHHHHHHHHTCS-SEEEEEEE-CSCHHHHHHHHHTTCCSEEE-S---------------------
T ss_pred             CcceEEEEcC-CHHHHHHHHHHHhcCC-CcEEEEEe-cCCHHHHHHHHHHhCCCccc-C---------------------
Confidence            4569999997 999999999888 655 59999865 45777777777777542221 1                     


Q ss_pred             EecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeec--ccchhHHhhhc-CCeEee-----cc
Q 017567          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAG--GPFVLPLAHKH-NIKILP-----AD  225 (369)
Q Consensus       154 ~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~a--G~li~~~a~k~-~~~IlP-----VD  225 (369)
                           .+.++++.+++|.|+.+..-..-..-+.+|+++||.|.+ .|-.-...  ..-+.++++++ +..+..     -+
T Consensus        62 -----~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~G~~v~~-eKp~~~~~~~~~~l~~~a~~~~~~~~~~~~~~r~~  135 (346)
T 3cea_A           62 -----NYKDMIDTENIDAIFIVAPTPFHPEMTIYAMNAGLNVFC-EKPLGLDFNEVDEMAKVIKSHPNQIFQSGFMRRYD  135 (346)
T ss_dssp             -----CHHHHHTTSCCSEEEECSCGGGHHHHHHHHHHTTCEEEE-CSCCCSCHHHHHHHHHHHHTCTTSCEECCCGGGTC
T ss_pred             -----CHHHHhcCCCCCEEEEeCChHhHHHHHHHHHHCCCEEEE-cCCCCCCHHHHHHHHHHHHhCCCCeEEEecccccC
Confidence                 124455556799999998888888889999999998765 55332221  22366778888 877653     23


Q ss_pred             cchhhHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhh-hhhhc
Q 017567          226 SEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLF  304 (369)
Q Consensus       226 SEHsAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIE-A~~LF  304 (369)
                      ..+..+-++++...-.+|..+-... ++|+.  +.....        ....|..|      .+.|++-|.-.|. ++|||
T Consensus       136 p~~~~~~~~i~~g~iG~i~~v~~~~-~~~~~--~~~~~~--------~~~~~~~~------gG~l~d~g~H~lD~~~~l~  198 (346)
T 3cea_A          136 DSYRYAKKIVDNGDIGKIIYMRGYG-IDPIS--GMESFT--------KFATEADS------GGIFVDMNIHDIDLIRWFT  198 (346)
T ss_dssp             HHHHHHHHHHHTTTTCSEEEEEEEE-EEEGG--GHHHHH--------HHHHHSCC------CCHHHHTTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCeEEEEEEe-cCCCC--CChhHh--------hhcccCCC------CchHHHhhccHHHHHHHHc
Confidence            4566677777765555676665542 33321  111000        00012111      3467777766665 47999


Q ss_pred             CCCCCceeEEEc----C-------CcceeeeEEeccCcE
Q 017567          305 GAEYDNIEIIIH----P-------QSIIHSMVETQDSSV  332 (369)
Q Consensus       305 ~i~~d~IevvIH----P-------qSiIHsmVef~DGSv  332 (369)
                      |-+++++.....    |       .-..+.+++|.||.+
T Consensus       199 G~~~~~V~a~~~~~~~~~~~~~~~~D~~~~~l~~~~G~~  237 (346)
T 3cea_A          199 GQDPVQAYGLTSNIAAPQLADIGEFETGVAQLKMSDGVI  237 (346)
T ss_dssp             SCCEEEEEEEEECSSCGGGGGGTCCSEEEEEEEETTSCE
T ss_pred             CCCCeEEEEEEeeccCccccccCCceeEEEEEEECCCcE
Confidence            977777766542    2       124678889998864

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=98.37  E-value=1.6e-05  Score=74.66  Aligned_cols=203  Identities=16%  Similarity=0.154  Sum_probs=135.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      +.||+|+|+ |.||..-+..++++|+ ++|++++ ..|-+.+.+.+++|...   .                        
T Consensus         3 ~~~vgiiG~-G~~g~~~~~~l~~~~~-~~l~av~-d~~~~~~~~~~~~~~~~---~------------------------   52 (331)
T 4hkt_A            3 TVRFGLLGA-GRIGKVHAKAVSGNAD-ARLVAVA-DAFPAAAEAIAGAYGCE---V------------------------   52 (331)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCTT-EEEEEEE-CSSHHHHHHHHHHTTCE---E------------------------
T ss_pred             ceEEEEECC-CHHHHHHHHHHhhCCC-cEEEEEE-CCCHHHHHHHHHHhCCC---c------------------------
Confidence            468999997 9999999999998864 9999865 55777777777776533   1                        


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccc-eeecccchhHHhhhcCCeEee-----cccchh
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKET-LIAGGPFVLPLAHKHNIKILP-----ADSEHS  229 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEs-LV~aG~li~~~a~k~~~~IlP-----VDSEHs  229 (369)
                        ..+.++++.+++|.|+.+..-..-...+.+|+++||.|.+-.-=+ =..-..-+.++++++|..+..     -+..+.
T Consensus        53 --~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~  130 (331)
T 4hkt_A           53 --RTIDAIEAAADIDAVVICTPTDTHADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGFNRRFDPHFM  130 (331)
T ss_dssp             --CCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHHHH
T ss_pred             --CCHHHHhcCCCCCEEEEeCCchhHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEcccccCCHHHH
Confidence              123455666789999999999999999999999999876522100 112234467788888877653     244455


Q ss_pred             hHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhh-hhhhcCCCC
Q 017567          230 AIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFGAEY  308 (369)
Q Consensus       230 AIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIE-A~~LF~i~~  308 (369)
                      .+-++|+...-.+|..+..+.. .|.. .+.. .             |..      ..+.|++-|--.|. ++||||-++
T Consensus       131 ~~~~~i~~g~iG~i~~~~~~~~-~~~~-~~~~-~-------------~~~------~gG~l~d~g~H~ld~~~~l~G~~~  188 (331)
T 4hkt_A          131 AVRKAIDDGRIGEVEMVTITSR-DPSA-PPVD-Y-------------IKR------SGGIFRDMTIHDFDMARFLLGEEP  188 (331)
T ss_dssp             HHHHHHHTTTTCSEEEEEEEEE-CSSC-CCHH-H-------------HHT------TTCHHHHTHHHHHHHHHHHHCSCE
T ss_pred             HHHHHHHcCCCCceEEEEEEec-CCCC-Cchh-h-------------hhc------CCCeeehheehHHHHHHHHhCCCc
Confidence            6666666555566766665532 2321 1111 1             011      23577777766665 589999777


Q ss_pred             CceeEEEc----C-------CcceeeeEEeccCcE
Q 017567          309 DNIEIIIH----P-------QSIIHSMVETQDSSV  332 (369)
Q Consensus       309 d~IevvIH----P-------qSiIHsmVef~DGSv  332 (369)
                      +++.....    |       .-..+.+++|.||.+
T Consensus       189 ~~v~a~~~~~~~~~~~~~~~~d~~~~~l~~~~G~~  223 (331)
T 4hkt_A          189 VSVTATAAVLIDKAIGDAGDYDSVSVILQTASGKQ  223 (331)
T ss_dssp             EEEEEEEECCSCHHHHHTTCCSEEEEEEEETTCCE
T ss_pred             cEEEEEeccccccccccCCCcceEEEEEEECCCCE
Confidence            77776643    2       234678899999864

>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*

Probab=98.35  E-value=6.7e-06  Score=77.73  Aligned_cols=212  Identities=14%  Similarity=0.160  Sum_probs=140.8

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEE
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      .|.||+|+|+.|+||..-+..+++.  ..+|+|++-. |-+. ++ +.+..|..                       +++
T Consensus         2 ~mirvgiIG~gG~i~~~h~~~l~~~--~~~lvav~d~-~~~~-~~-~~~~~~~~-----------------------~~~   53 (312)
T 3o9z_A            2 HMTRFALTGLAGYIAPRHLKAIKEV--GGVLVASLDP-ATNV-GL-VDSFFPEA-----------------------EFF   53 (312)
T ss_dssp             -CCEEEEECTTSSSHHHHHHHHHHT--TCEEEEEECS-SCCC-GG-GGGTCTTC-----------------------EEE
T ss_pred             CceEEEEECCChHHHHHHHHHHHhC--CCEEEEEEcC-CHHH-HH-HHhhCCCC-----------------------cee
Confidence            4679999999999999999999986  4799997753 3232 11 22222222                       222


Q ss_pred             ecHHHHHHHh-----cCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccce--eecccchhHHhhhcCCeEee----
Q 017567          155 AGEQGVIEAA-----RHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILP----  223 (369)
Q Consensus       155 ~G~~gl~~~~-----~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsL--V~aG~li~~~a~k~~~~IlP----  223 (369)
                      ..-+.+.+++     +.+++|.|+.+..-..=..-+.+|+++||.|.+ -|=.-  +.-..-+.++|+++|..+..    
T Consensus        54 ~~~~~ll~~~~~l~~~~~~vD~V~I~tP~~~H~~~~~~al~aGkhVl~-EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~  132 (312)
T 3o9z_A           54 TEPEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALRLGANALS-EKPLVLWPEEIARLKELEARTGRRVYTVLQL  132 (312)
T ss_dssp             SCHHHHHHHHHHHHHTTCCCSEEEECSCGGGHHHHHHHHHHTTCEEEE-CSSSCSCHHHHHHHHHHHHHHCCCEEECCGG
T ss_pred             CCHHHHHHHhhhhcccCCCCcEEEECCCchhhHHHHHHHHHCCCeEEE-ECCCCCCHHHHHHHHHHHHHcCCEEEEEeeh
Confidence            2222222221     567899999999998888999999999999874 23211  22345567888898876643    


Q ss_pred             -cccchhhHHHhhcCCCCCccceEEEee--cCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhhh
Q 017567          224 -ADSEHSAIFQCIQGLPEGALRRIILTA--SGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEA  300 (369)
Q Consensus       224 -VDSEHsAIfQ~L~g~~~~~v~kiiLTA--SGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIEA  300 (369)
                       -+..+.++-+.++..  .+|..+-.+-  +.|+++                 ..+|..-+..  ..+.|+|-|.-.|..
T Consensus       133 R~~p~~~~~k~~i~~g--G~i~~v~~~~~~~~~~~~-----------------~~~w~~~~~~--~gG~l~d~g~H~id~  191 (312)
T 3o9z_A          133 RVHPSLLALKERLGQE--KGAKDVVLTYVTGRGKWY-----------------GKSWKVDEAK--SGGLATNIGIHFFDL  191 (312)
T ss_dssp             GGCHHHHHHHHHHHTC--CSCEEEEEEEEECCCTTG-----------------GGSGGGCHHH--HCCHHHHTTHHHHHH
T ss_pred             hcCHHHHHHHHHHHcC--CCEEEEEEEEEccCCCcc-----------------ccccccCccc--CCCeeeecccCHHHH
Confidence             244445555556543  4566554443  222211                 2356543322  357899998877775


Q ss_pred             -hhhcCCCCCceeEEEcCCcceeeeEEeccCcEEEecC
Q 017567          301 -HYLFGAEYDNIEIIIHPQSIIHSMVETQDSSVIGQLG  337 (369)
Q Consensus       301 -~~LF~i~~d~IevvIHPqSiIHsmVef~DGSv~Aql~  337 (369)
                       +|||| +++++.+-+..+..++.+++|.+|.+-.+++
T Consensus       192 ~~~l~G-~~~~v~~~~~~~d~~~~~l~~~~g~v~~~~s  228 (312)
T 3o9z_A          192 LAWLFG-RALHVEVHARTPTVNAGYLELEGARVRWFLS  228 (312)
T ss_dssp             HHHHHC-CEEEEEEEEECSSEEEEEEEETTEEEEEEEE
T ss_pred             HHHHhC-CCeEEEEEecCCceEEEEEEECCCcEEEEEE
Confidence             89999 5677888888999999999999999876666

>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A

Probab=98.34  E-value=1.4e-05  Score=75.98  Aligned_cols=204  Identities=15%  Similarity=0.186  Sum_probs=134.3

Q ss_pred             CeeEEEEecCChHhH-HHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEE
Q 017567           76 PKPISVLGSTGSIGT-QTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        76 ~kkI~ILGSTGSIGt-qTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      +.||+|+|+ |.||. .-+..++++| +++|+|++..+..+.++++.....                         +.++
T Consensus         2 ~~rvgiiG~-G~~g~~~~~~~l~~~~-~~~l~av~d~~~~~~~a~~~~~~~-------------------------~~~~   54 (349)
T 3i23_A            2 TVKMGFIGF-GKSANRYHLPYVMIRE-TLEVKTIFDLHVNEKAAAPFKEKG-------------------------VNFT   54 (349)
T ss_dssp             CEEEEEECC-SHHHHHTTHHHHTTCT-TEEEEEEECTTCCHHHHHHHHTTT-------------------------CEEE
T ss_pred             eeEEEEEcc-CHHHHHHHHHHHhhCC-CeEEEEEECCCHHHHHHHhhCCCC-------------------------CeEE
Confidence            358999997 99998 6888888764 699999987653333332221111                         1121


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccce--eecccchhHHhhhcCCeEee-----cccc
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILP-----ADSE  227 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsL--V~aG~li~~~a~k~~~~IlP-----VDSE  227 (369)
                         ..+.++++.+++|.|+.+..-..-..-+.+|+++||.|.+ .|=.-  +.-..-+.++|+++|..+.-     -+..
T Consensus        55 ---~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~-EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~  130 (349)
T 3i23_A           55 ---ADLNELLTDPEIELITICTPAHTHYDLAKQAILAGKSVIV-EKPFCDTLEHAEELFALGQEKGVVVMPYQNRRFDGD  130 (349)
T ss_dssp             ---SCTHHHHSCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEE-CSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHH
T ss_pred             ---CCHHHHhcCCCCCEEEEeCCcHHHHHHHHHHHHcCCEEEE-ECCCcCCHHHHHHHHHHHHHcCCeEEEEecccCCHH
Confidence               1345667777899999999888888889999999999876 45432  22344567888999887653     2334


Q ss_pred             hhhHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhh-hhhhcCC
Q 017567          228 HSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFGA  306 (369)
Q Consensus       228 HsAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIE-A~~LF~i  306 (369)
                      +..+-++++...-.+|..+-  ++-+.++  |         .     +.|..-.   -..+.|++-|.-.|. ++|||| 
T Consensus       131 ~~~~~~~i~~g~iG~i~~~~--~~~~~~~--~---------~-----~~w~~~~---~ggG~l~d~g~H~id~~~~l~G-  188 (349)
T 3i23_A          131 YLAMKQVVEQGFLGEINEVE--THIDYYR--P---------G-----SITEQGP---KENGSFYGLGIHLMDRMIALFG-  188 (349)
T ss_dssp             HHHHHHHHHHTTTCSEEEEE--EECCCBC--T---------T-----SCCSCCC---GGGSHHHHTHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHhcCCCCCEEEEE--EEecccC--C---------c-----hhhcccC---CCCCeehhhhhHHHHHHHHHhC-
Confidence            44555555544444555443  3322222  1         1     5687544   457889999877776 589999 


Q ss_pred             CCCceeEEEcC-------CcceeeeEEeccCcE
Q 017567          307 EYDNIEIIIHP-------QSIIHSMVETQDSSV  332 (369)
Q Consensus       307 ~~d~IevvIHP-------qSiIHsmVef~DGSv  332 (369)
                      +++.+......       +-..+.+++|.||.+
T Consensus       189 ~p~~V~a~~~~~~~~~~~~d~~~~~l~~~~G~~  221 (349)
T 3i23_A          189 RPDQVTYDIRNNEVSEAVDNYFDVDLHYGSKLK  221 (349)
T ss_dssp             CCSEEEECEECSSSTTSCCCEEEEEEEETTTEE
T ss_pred             CCeEEEEEEEeeCCCCCcceEEEEEEEeCCCcE
Confidence            78888775432       346788999999854

>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}

Probab=98.32  E-value=2.5e-05  Score=74.74  Aligned_cols=203  Identities=15%  Similarity=0.160  Sum_probs=134.6

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEE
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      .+.||+|+|+ |.||..-+..+.+..+.++|+++.- .|-+++.+.+++|.......                       
T Consensus        22 ~~~rvgiIG~-G~~g~~~~~~l~~~~~~~~lvav~d-~~~~~~~~~a~~~g~~~~~~-----------------------   76 (357)
T 3ec7_A           22 MTLKAGIVGI-GMIGSDHLRRLANTVSGVEVVAVCD-IVAGRAQAALDKYAIEAKDY-----------------------   76 (357)
T ss_dssp             CCEEEEEECC-SHHHHHHHHHHHHTCTTEEEEEEEC-SSTTHHHHHHHHHTCCCEEE-----------------------
T ss_pred             CeeeEEEECC-cHHHHHHHHHHHhhCCCcEEEEEEe-CCHHHHHHHHHHhCCCCeee-----------------------
Confidence            3569999997 9999999999983334699999764 46677777777776211111                       


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccce--eecccchhHHhhhcCCeEeec------cc
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILPA------DS  226 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsL--V~aG~li~~~a~k~~~~IlPV------DS  226 (369)
                         ..+.++++.+++|.|+.+..-..-...+.+|+++||.|.+- |=.-  +.-..-+.++|+++|..++=|      +.
T Consensus        77 ---~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~E-KPla~~~~e~~~l~~~a~~~g~~~~~v~~~~R~~p  152 (357)
T 3ec7_A           77 ---NDYHDLINDKDVEVVIITASNEAHADVAVAALNANKYVFCE-KPLAVTAADCQRVIEAEQKNGKRMVQIGFMRRYDK  152 (357)
T ss_dssp             ---SSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEE-SSSCSSHHHHHHHHHHHHHHTSCCEEEECGGGGSH
T ss_pred             ---CCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCEEee-cCccCCHHHHHHHHHHHHHhCCeEEEEeecccCCH
Confidence               12355666678999999999988899999999999987642 2111  122344677888899876433      44


Q ss_pred             chhhHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCC-CCCCCCccceehhhhcchhHHHhh-hhhhc
Q 017567          227 EHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHP-NWSMGKKITVDSATLFNKGLEVIE-AHYLF  304 (369)
Q Consensus       227 EHsAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP-~W~MG~KITIDSATmmNKgLEvIE-A~~LF  304 (369)
                      .+..+-++++...-.+|..+..+. ..|..                  | .|. |      ...|++-|.-.|. ++|||
T Consensus       153 ~~~~~k~~i~~g~iG~i~~v~~~~-~~~~~------------------p~~w~-g------gg~l~d~g~H~iDl~~~l~  206 (357)
T 3ec7_A          153 GYVQLKNIIDSGEIGQPLMVHGRH-YNAST------------------VPEYK-T------PQAIYETLIHEIDVMHWLL  206 (357)
T ss_dssp             HHHHHHHHHHHTTTCSEEEEEEEE-ECSCC------------------CTTCC-T------THHHHTTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCeEEEEEEE-eCCCC------------------Ccccc-C------CchhhhcccHHHHHHHHHc
Confidence            455566666544445565554432 22221                  2 465 2      3468888776666 57999


Q ss_pred             CCCCCceeEEEcC--------CcceeeeEEeccCcE
Q 017567          305 GAEYDNIEIIIHP--------QSIIHSMVETQDSSV  332 (369)
Q Consensus       305 ~i~~d~IevvIHP--------qSiIHsmVef~DGSv  332 (369)
                      |-+++++.+....        .-....+++|.||.+
T Consensus       207 G~~~~~V~a~~~~~~~~~~~~~D~~~~~l~~~~G~~  242 (357)
T 3ec7_A          207 NEDYKTVKVYFPRQSSLVTTLRDPQLVVMETTSGIN  242 (357)
T ss_dssp             TCCEEEEEEECCSCCTTCCSSCCSEEEEEEETTCCE
T ss_pred             CCCceEEEEEEecccccCCCcceeEEEEEEECCCCE
Confidence            9877777766433        235678899999874

>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5

Probab=98.27  E-value=4.1e-05  Score=72.69  Aligned_cols=214  Identities=13%  Similarity=0.097  Sum_probs=141.7

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEE
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      .+.||+|+|+-+.+|..-+..+++.+++++|+|++ ..|.+.+.+.+++|....++                        
T Consensus        17 ~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~-d~~~~~~~~~a~~~~~~~~~------------------------   71 (340)
T 1zh8_A           17 RKIRLGIVGCGIAARELHLPALKNLSHLFEITAVT-SRTRSHAEEFAKMVGNPAVF------------------------   71 (340)
T ss_dssp             CCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEE-CSSHHHHHHHHHHHSSCEEE------------------------
T ss_pred             CceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEE-cCCHHHHHHHHHHhCCCccc------------------------
Confidence            35689999964389999999999886789999976 45778887777777631111                        


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccce--eecccchhHHhhhcCCeEee-----cccc
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILP-----ADSE  227 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsL--V~aG~li~~~a~k~~~~IlP-----VDSE  227 (369)
                         ..+.++++.+++|.|+.+..-..-...+.+|+++||.|.+ -|=.-  +.-..-+.++|+++|..+..     -+..
T Consensus        72 ---~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~-EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~  147 (340)
T 1zh8_A           72 ---DSYEELLESGLVDAVDLTLPVELNLPFIEKALRKGVHVIC-EKPISTDVETGKKVVELSEKSEKTVYIAENFRHVPA  147 (340)
T ss_dssp             ---SCHHHHHHSSCCSEEEECCCGGGHHHHHHHHHHTTCEEEE-ESSSSSSHHHHHHHHHHHHHCSSCEEEECGGGGCHH
T ss_pred             ---CCHHHHhcCCCCCEEEEeCCchHHHHHHHHHHHCCCcEEE-eCCCCCCHHHHHHHHHHHHHcCCeEEEEecccCCHH
Confidence               1234556667899999999888888899999999998866 24221  12234467788888876653     1555


Q ss_pred             hhhHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhh-hhhhcCC
Q 017567          228 HSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFGA  306 (369)
Q Consensus       228 HsAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIE-A~~LF~i  306 (369)
                      +..+-++|+...-.+|..+-.+. +++++....           ...++|..-++-  ..+.|++-|.-.|. ++|||| 
T Consensus       148 ~~~~k~~i~~g~iG~i~~v~~~~-~~~~~~~~~-----------~~~~~w~~~~~~--~GG~l~d~g~H~ld~~~~l~G-  212 (340)
T 1zh8_A          148 FWKAKELVESGAIGDPVFMNWQI-WVGMDENNK-----------YVHTDWRKKPKH--VGGFLSDGGVHHAAAMRLILG-  212 (340)
T ss_dssp             HHHHHHHHHTTTTSSEEEEEEEE-EBCCCTTCS-----------GGGCHHHHTTCS--TTTHHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHhcCCCCCcEEEEEEE-eccccccCC-----------CCCcCceECCcC--CCceeeeccHHHHHHHHHhhC-
Confidence            56666677655555676665553 345543211           112345332221  23567777765555 579999 


Q ss_pred             CCCceeEEEcC-------CcceeeeEEeccCcE
Q 017567          307 EYDNIEIIIHP-------QSIIHSMVETQDSSV  332 (369)
Q Consensus       307 ~~d~IevvIHP-------qSiIHsmVef~DGSv  332 (369)
                      +++++......       .-..+.+++|.||.+
T Consensus       213 ~~~~V~a~~~~~~~~~~~~D~~~~~l~~~~G~~  245 (340)
T 1zh8_A          213 EIEWISAVAKDLSPLLGGMDFLSSIFEFENGTV  245 (340)
T ss_dssp             CEEEEEEEEECCCTTSSSCCEEEEEEEETTSCE
T ss_pred             CCeEEEEEEEccCCCCCCcceEEEEEEeCCCCE
Confidence            77777776542       345778899998864

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=98.27  E-value=3e-05  Score=72.34  Aligned_cols=206  Identities=14%  Similarity=0.147  Sum_probs=136.5

Q ss_pred             eEEEEecCChHhHHH-HHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           78 PISVLGSTGSIGTQT-LDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        78 kI~ILGSTGSIGtqT-LdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      ||+|+|+ |.||... +..+.+ + .++|++++ ..|.+++.+.+++|....+                        +  
T Consensus         2 ~vgiiG~-G~~g~~~~~~~l~~-~-~~~~vav~-d~~~~~~~~~~~~~g~~~~------------------------~--   51 (332)
T 2glx_A            2 RWGLIGA-STIAREWVIGAIRA-T-GGEVVSMM-STSAERGAAYATENGIGKS------------------------V--   51 (332)
T ss_dssp             EEEEESC-CHHHHHTHHHHHHH-T-TCEEEEEE-CSCHHHHHHHHHHTTCSCC------------------------B--
T ss_pred             eEEEEcc-cHHHHHhhhHHhhc-C-CCeEEEEE-CCCHHHHHHHHHHcCCCcc------------------------c--
Confidence            7999996 9999997 778877 4 69999865 5577777666666642110                        0  


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccce--eecccchhHHhhhcCCeEee-----cccchh
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILP-----ADSEHS  229 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsL--V~aG~li~~~a~k~~~~IlP-----VDSEHs  229 (369)
                       ..+.++++.+++|+|+.+..-..-..-+.+|+++||.|.+ .|-.-  +.-..-+.++|+++|..+..     -+..+.
T Consensus        52 -~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk~v~~-ekP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~  129 (332)
T 2glx_A           52 -TSVEELVGDPDVDAVYVSTTNELHREQTLAAIRAGKHVLC-EKPLAMTLEDAREMVVAAREAGVVLGTNHHLRNAAAHR  129 (332)
T ss_dssp             -SCHHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEE-CSSSCSSHHHHHHHHHHHHHHTCCEEECCCGGGSHHHH
T ss_pred             -CCHHHHhcCCCCCEEEEeCChhHhHHHHHHHHHCCCeEEE-eCCCcCCHHHHHHHHHHHHHcCCEEEEeehhhcCHHHH
Confidence             1234566666799999999887777888999999998765 44221  11234467788888877654     344566


Q ss_pred             hHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhh-hhhhcCCCC
Q 017567          230 AIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFGAEY  308 (369)
Q Consensus       230 AIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIE-A~~LF~i~~  308 (369)
                      .+-++|+...-.+|..+-.+-+...    +            -..++|..-++- -..+.|++-|--.|. ++||||-++
T Consensus       130 ~~~~~i~~g~iG~i~~v~~~~~~~~----~------------~~~~~w~~~~~~-~ggG~l~d~g~H~id~~~~l~G~~~  192 (332)
T 2glx_A          130 AMRDAIAEGRIGRPIAARVFHAVYL----P------------PHLQGWRLERPE-AGGGVILDITVHDADTLRFVLNDDP  192 (332)
T ss_dssp             HHHHHHHTTTTSSEEEEEEEEECBC----C------------GGGTTGGGSCTT-TTCSHHHHTHHHHHHHHHHHHTSCE
T ss_pred             HHHHHHHcCCCCCeEEEEEEEcccC----C------------CCCCCcccccCC-CCCchHhhhhHHHHHHHHHHcCCCC
Confidence            6677777655566777766654322    1            123456433211 124567877766665 589999877


Q ss_pred             CceeEEEcC--------CcceeeeEEeccCcE
Q 017567          309 DNIEIIIHP--------QSIIHSMVETQDSSV  332 (369)
Q Consensus       309 d~IevvIHP--------qSiIHsmVef~DGSv  332 (369)
                      .++......        +-..+.+++|.||.+
T Consensus       193 ~~V~a~~~~~~~~~~~~~d~~~~~l~~~~G~~  224 (332)
T 2glx_A          193 AEAVAISHSAGMGKEGVEDGVMGVLRFQSGVI  224 (332)
T ss_dssp             EEEEEEEECCSSSCTTCCSEEEEEEEETTSCE
T ss_pred             cEEEEEEecCCCCCCCccceEEEEEEECCCcE
Confidence            788776432        236788899999854

>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A

Probab=98.26  E-value=3.3e-05  Score=77.70  Aligned_cols=215  Identities=11%  Similarity=0.157  Sum_probs=143.4

Q ss_pred             CeeEEEEecC---ChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCce
Q 017567           76 PKPISVLGST---GSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPE  152 (369)
Q Consensus        76 ~kkI~ILGST---GSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~  152 (369)
                      +.||+|+|++   |.||..-+..+++.++.++|+|++ ..|.+.+.+.+++|...-+                      .
T Consensus        39 ~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~-d~~~~~a~~~a~~~g~~~~----------------------~   95 (479)
T 2nvw_A           39 PIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALY-NPTLKSSLQTIEQLQLKHA----------------------T   95 (479)
T ss_dssp             CEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEE-CSCHHHHHHHHHHTTCTTC----------------------E
T ss_pred             cCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEE-eCCHHHHHHHHHHcCCCcc----------------------e
Confidence            4689999995   999999999999885679999965 5677887777777763210                      1


Q ss_pred             EEecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcC------Cceeeecccce--eecccchhHHhhhcC-CeEee
Q 017567          153 ILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG------KDIALANKETL--IAGGPFVLPLAHKHN-IKILP  223 (369)
Q Consensus       153 v~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~g------K~iaLANKEsL--V~aG~li~~~a~k~~-~~IlP  223 (369)
                      ++   ..+.++++.+++|.|+.+..-..-..-+.+|+++|      |.|.+ .|=.-  +.-..-+.++|+++| +.+.-
T Consensus        96 ~~---~d~~ell~~~~vD~V~I~tp~~~H~~~~~~al~aG~~~~~~khVl~-EKPla~~~~ea~~l~~~a~~~g~~~~~v  171 (479)
T 2nvw_A           96 GF---DSLESFAQYKDIDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYV-EWALAASVQQAEELYSISQQRANLQTII  171 (479)
T ss_dssp             EE---SCHHHHHHCTTCSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEE-ESSSSSSHHHHHHHHHHHHTCTTCEEEE
T ss_pred             ee---CCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCcCCceeEEE-eCCCcCCHHHHHHHHHHHHHcCCeEEEE
Confidence            11   12345666678999999998888888899999999      88765 56321  223355677888888 66543


Q ss_pred             -----cccchhhHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHh
Q 017567          224 -----ADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVI  298 (369)
Q Consensus       224 -----VDSEHsAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvI  298 (369)
                           -+..+..+-++|+...-.+|..+-.+..++.++...        +   ..+++|..-+.  -..+.|++-|--.|
T Consensus       172 ~~~~R~~p~~~~~k~~i~~G~iG~i~~v~~~~~~~~~~~~~--------~---~~~~~w~~~~~--~gGG~l~d~g~H~l  238 (479)
T 2nvw_A          172 CLQGRKSPYIVRAKELISEGCIGDINSIEISGNGGWYGYER--------P---MRSPEYLYDIE--SGVNLISNSFGHTI  238 (479)
T ss_dssp             ECGGGGCHHHHHHHHHHHTTTTCSEEEEEEEEECSBSSSEE--------E---TTCCGGGGCGG--GSCSTTTTHHHHHH
T ss_pred             EeccccCHHHHHHHHHHHcCCCCCeEEEEEEecCCccCCcc--------c---ccccccccCcc--cCccHHHHHHHHHH
Confidence                 244555566667655556777776665443332211        0   12456754322  12356788877666


Q ss_pred             h-hhhhcCCCCCceeEEEc---C--------------------CcceeeeEEeccC
Q 017567          299 E-AHYLFGAEYDNIEIIIH---P--------------------QSIIHSMVETQDS  330 (369)
Q Consensus       299 E-A~~LF~i~~d~IevvIH---P--------------------qSiIHsmVef~DG  330 (369)
                      . ++||||-+++++.....   |                    .-.+..+++|.||
T Consensus       239 Dl~~~l~G~~p~~V~a~~~~~~~~~~~~~~~g~~~g~~~~~~~~D~~~~~l~f~~G  294 (479)
T 2nvw_A          239 DVLQYITGSYFQKINAMISNNIPTQFLLDENGKRTKETISKTCPDHLLFQGILENG  294 (479)
T ss_dssp             HHHHHHHTCCEEEEEEEEECCCSEEEEEC--CCCCSCEEECCSCCEEEEEEEESGG
T ss_pred             HHHHHHHCCCCCEEEEEEEeccCcccccccccccccccccCCcCeEEEEEEEECCC
Confidence            5 57999977777766653   2                    2236677899998

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=98.25  E-value=6.8e-05  Score=71.54  Aligned_cols=207  Identities=15%  Similarity=0.207  Sum_probs=136.0

Q ss_pred             CCeeEEEEecCChHhH-HHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceE
Q 017567           75 GPKPISVLGSTGSIGT-QTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI  153 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGt-qTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v  153 (369)
                      .+.||+|+|+ |.||. .-+..+++.| .++|+|++ ..|.++..+.+++|....+                        
T Consensus        26 ~~~rigiIG~-G~~g~~~~~~~l~~~~-~~~l~av~-d~~~~~~~~~a~~~g~~~~------------------------   78 (350)
T 3rc1_A           26 NPIRVGVIGC-ADIAWRRALPALEAEP-LTEVTAIA-SRRWDRAKRFTERFGGEPV------------------------   78 (350)
T ss_dssp             CCEEEEEESC-CHHHHHTHHHHHHHCT-TEEEEEEE-ESSHHHHHHHHHHHCSEEE------------------------
T ss_pred             CceEEEEEcC-cHHHHHHHHHHHHhCC-CeEEEEEE-cCCHHHHHHHHHHcCCCCc------------------------
Confidence            3568999995 99998 7889998876 59999975 4577777777777754321                        


Q ss_pred             EecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccce--eecccchhHHhhhcCCeEee-----ccc
Q 017567          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILP-----ADS  226 (369)
Q Consensus       154 ~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsL--V~aG~li~~~a~k~~~~IlP-----VDS  226 (369)
                          ..+.++++.+++|.|+.+..-..-..-+.+|+++||.|.+ -|=.-  +.-..-+.++|+++|..+..     -+.
T Consensus        79 ----~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~-EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p  153 (350)
T 3rc1_A           79 ----EGYPALLERDDVDAVYVPLPAVLHAEWIDRALRAGKHVLA-EKPLTTDRPQAERLFAVARERGLLLMENFMFLHHP  153 (350)
T ss_dssp             ----ESHHHHHTCTTCSEEEECCCGGGHHHHHHHHHHTTCEEEE-ESSSCSSHHHHHHHHHHHHHTTCCEEEECGGGGCT
T ss_pred             ----CCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHCCCcEEE-eCCCCCCHHHHHHHHHHHHHhCCEEEEEecccCCH
Confidence                2345666677899999999988889999999999998653 22211  11234466788888887653     245


Q ss_pred             chhhHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhh-hhhhcC
Q 017567          227 EHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFG  305 (369)
Q Consensus       227 EHsAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIE-A~~LF~  305 (369)
                      .+..+-++|+...-.+|..+-.+-+. |.+  +              ..+|..=+.  ...+.|++-|.-.|. ++||||
T Consensus       154 ~~~~~k~~i~~G~iG~i~~v~~~~~~-~~~--~--------------~~~wr~~~~--~gGG~l~d~g~H~ld~~~~l~G  214 (350)
T 3rc1_A          154 QHRQVADMLDEGVIGEIRSFAASFTI-PPK--P--------------QGDIRYQAD--VGGGALLDIGVYPIRAAGLFLG  214 (350)
T ss_dssp             HHHHHHHHHHTTTTCSEEEEEEEEEC-CCC--C--------------TTCGGGCTT--TTCHHHHHTTHHHHHHHHHHHC
T ss_pred             HHHHHHHHHhcCCCCCeEEEEEEEec-CCC--C--------------ccccccCcc--cCccHHHHHHHHHHHHHHHHcC
Confidence            55666667765555566666555432 111  1              124432111  124677777755554 579999


Q ss_pred             CCCCceeEEEcC------CcceeeeEEeccCcE
Q 017567          306 AEYDNIEIIIHP------QSIIHSMVETQDSSV  332 (369)
Q Consensus       306 i~~d~IevvIHP------qSiIHsmVef~DGSv  332 (369)
                      -+++.+......      +...+.+++|.||.+
T Consensus       215 ~~~~~v~a~~~~~~~~~~d~~~~~~l~~~~G~~  247 (350)
T 3rc1_A          215 ADLEFVGAVLRHERDRDVVVGGNALLTTRQGVT  247 (350)
T ss_dssp             TTCEEEEEEEEEETTTTEEEEEEEEEECTTCCE
T ss_pred             CCcEEEEEEEEeCCCCCccceEEEEEEECCCCE
Confidence            777777765432      124577889988854

>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}

Probab=98.21  E-value=7.6e-05  Score=70.78  Aligned_cols=210  Identities=15%  Similarity=0.148  Sum_probs=136.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      +.||+|+|+ |.||..-+..++++| .++|+++. ..|-+.+.+.+++|..+.  .                        
T Consensus         5 ~~~vgiiG~-G~~g~~~~~~l~~~~-~~~lvav~-d~~~~~~~~~~~~~g~~~--~------------------------   55 (354)
T 3db2_A            5 PVGVAAIGL-GRWAYVMADAYTKSE-KLKLVTCY-SRTEDKREKFGKRYNCAG--D------------------------   55 (354)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHTTCS-SEEEEEEE-CSSHHHHHHHHHHHTCCC--C------------------------
T ss_pred             cceEEEEcc-CHHHHHHHHHHHhCC-CcEEEEEE-CCCHHHHHHHHHHcCCCC--c------------------------
Confidence            468999997 999999999999887 59999865 567787777777765322  0                        


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccce-eecccchhHHhhhcCCeEee-----cccchh
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL-IAGGPFVLPLAHKHNIKILP-----ADSEHS  229 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsL-V~aG~li~~~a~k~~~~IlP-----VDSEHs  229 (369)
                        ..+.++++.+++|.|+.+..-..-...+.+|+++||.|.+-.-=++ +.-..-+.++++++|..+..     -+..+.
T Consensus        56 --~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~R~~p~~~  133 (354)
T 3db2_A           56 --ATMEALLAREDVEMVIITVPNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGHSSRRLGALR  133 (354)
T ss_dssp             --SSHHHHHHCSSCCEEEECSCTTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEECGGGGSHHHH
T ss_pred             --CCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEeechhcCHHHH
Confidence              1235566667899999999998889999999999998765321011 12244567788888876653     244455


Q ss_pred             hHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhh-hhhhcCCCC
Q 017567          230 AIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFGAEY  308 (369)
Q Consensus       230 AIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIE-A~~LF~i~~  308 (369)
                      .+-++++...-.+|..+-.+-+      +.+..        .....+|..-+.-. -.+.|++-|--.|. ++||||- +
T Consensus       134 ~~k~~i~~g~iG~i~~v~~~~~------~~~~~--------~~~~~~w~~~~~~~-ggG~l~d~g~H~ld~~~~l~G~-~  197 (354)
T 3db2_A          134 KMKEMIDTKEIGEVSSIEAVFS------NERGL--------ELKKGNWRGEPATA-PGGPLTQLGVHQIDNLQFLLGP-V  197 (354)
T ss_dssp             HHHHHHHTTTTCCEEEEEEEEE------CSGGG--------TCCTTCGGGCTTTS-TTTHHHHTHHHHHHHHHHHHCC-E
T ss_pred             HHHHHHhcCCCCCeEEEEEEEE------eccCc--------ccccCCCccccccC-CCceeccchhHHHHHHHHHhCC-C
Confidence            5666666555556665544432      11110        01223565322210 13477887766665 4899995 4


Q ss_pred             CceeEEEc-------CCcceeeeEEeccCcE
Q 017567          309 DNIEIIIH-------PQSIIHSMVETQDSSV  332 (369)
Q Consensus       309 d~IevvIH-------PqSiIHsmVef~DGSv  332 (369)
                      +++.....       -+-..+.+++|.||.+
T Consensus       198 ~~V~a~~~~~~~~~~~~d~~~~~l~~~~G~~  228 (354)
T 3db2_A          198 ARVFNFGKPMYTEVENITVNQTLLEFEDGKQ  228 (354)
T ss_dssp             EEEEEEEECCSCSSSSCCEEEEEEEETTSCE
T ss_pred             eEEEEEeeccCCCCCCCceEEEEEEECCCCE
Confidence            66666532       2346788999999864

>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}

Probab=98.18  E-value=7.5e-05  Score=72.36  Aligned_cols=227  Identities=17%  Similarity=0.138  Sum_probs=138.3

Q ss_pred             CCCeeEEEEecCCh---HhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCC
Q 017567           74 DGPKPISVLGSTGS---IGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEK  150 (369)
Q Consensus        74 ~~~kkI~ILGSTGS---IGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~  150 (369)
                      ..+.||+|+| +|.   ||..-+..++..+ +|+|++.++..|.++..+.+++|.-.-     ...+..+++.|..    
T Consensus        10 m~~~rvgiiG-~G~~~~ig~~h~~~~~~~~-~~~lva~v~d~~~~~a~~~a~~~g~~~-----~~~~~~~~~ll~~----   78 (398)
T 3dty_A           10 PQPIRWAMVG-GGSQSQIGYIHRCAALRDN-TFVLVAGAFDIDPIRGSAFGEQLGVDS-----ERCYADYLSMFEQ----   78 (398)
T ss_dssp             CSCEEEEEEE-CCTTCSSHHHHHHHHHGGG-SEEEEEEECCSSHHHHHHHHHHTTCCG-----GGBCSSHHHHHHH----
T ss_pred             cCcceEEEEc-CCccchhHHHHHHHHhhCC-CeEEEEEEeCCCHHHHHHHHHHhCCCc-----ceeeCCHHHHHhc----
Confidence            3456999999 576   9999888888765 499999778889999888888886320     0111112221110    


Q ss_pred             ceEEecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccce--eecccchhHHhhhcCCeEee-----
Q 017567          151 PEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILP-----  223 (369)
Q Consensus       151 ~~v~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsL--V~aG~li~~~a~k~~~~IlP-----  223 (369)
                                 +.++.+++|.|+.+..-..-...+.+|+++||.|.+ -|=.-  +.-..-+.++|+++|+.+.-     
T Consensus        79 -----------~~~~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~-EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~r  146 (398)
T 3dty_A           79 -----------EARRADGIQAVSIATPNGTHYSITKAALEAGLHVVC-EKPLCFTVEQAENLRELSHKHNRIVGVTYGYA  146 (398)
T ss_dssp             -----------HTTCTTCCSEEEEESCGGGHHHHHHHHHHTTCEEEE-CSCSCSCHHHHHHHHHHHHHTTCCEEECCGGG
T ss_pred             -----------ccccCCCCCEEEECCCcHHHHHHHHHHHHCCCeEEE-eCCCcCCHHHHHHHHHHHHHcCCeEEEEeccc
Confidence                       001236799999999888888999999999999865 33221  12344567888888876642     


Q ss_pred             cccchhhHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhh-hhh
Q 017567          224 ADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHY  302 (369)
Q Consensus       224 VDSEHsAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIE-A~~  302 (369)
                      -+.....+-++|+...-.+|..+-.+-+.+-++ .+.+.        --...+|..-++..=.++.|++-|.-.|. ++|
T Consensus       147 ~~p~~~~~k~~i~~G~iG~i~~v~~~~~~~~~~-~~~~~--------~~~~~~Wr~~~~~~G~gG~l~d~g~H~idl~~~  217 (398)
T 3dty_A          147 GHQLIEQAREMIAAGELGDVRMVHMQFAHGFHS-APVEA--------QSQATQWRVDPRQAGPSYVLGDVGTHPLYLSEV  217 (398)
T ss_dssp             GSHHHHHHHHHHHTTTTCSEEEEEEEEECCTTC-C--------------------------CCCSHHHHTTHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhcCCCCCeEEEEEEEeccccc-Ccccc--------ccCCCCcccCHHHcCCccHHHHHHHHHHHHHHH
Confidence            133344555666655556777777665433222 11110        02345686655544335668887755554 578


Q ss_pred             h-cCCCCCceeEEEc--------CCcceeeeEEeccCcE
Q 017567          303 L-FGAEYDNIEIIIH--------PQSIIHSMVETQDSSV  332 (369)
Q Consensus       303 L-F~i~~d~IevvIH--------PqSiIHsmVef~DGSv  332 (369)
                      | ||.+++++.....        -+-..+.+++|.||.+
T Consensus       218 l~~G~~~~~V~a~~~~~~~~~~~~~D~~~~~l~~~~G~~  256 (398)
T 3dty_A          218 MLPDLKIKRLMCSRQSFVASRAPLEDNAYTLMEYEGGAM  256 (398)
T ss_dssp             HCTTCCEEEEEEEEECSSGGGTTSCSEEEEEEEETTSCE
T ss_pred             HhcCCCcEEEEEEeEeecCCCCCcceEEEEEEEECCCCE
Confidence            8 8987788777654        2336788999999865

>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}

Probab=98.18  E-value=2.2e-05  Score=73.86  Aligned_cols=208  Identities=14%  Similarity=0.132  Sum_probs=134.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      +.||+|+|+ |.||..-+..+++.| .++|++++. .|.+++.+.+++|....                        ++ 
T Consensus         5 ~~rigiiG~-G~ig~~~~~~l~~~~-~~~~~av~d-~~~~~~~~~a~~~~~~~------------------------~~-   56 (329)
T 3evn_A            5 KVRYGVVST-AKVAPRFIEGVRLAG-NGEVVAVSS-RTLESAQAFANKYHLPK------------------------AY-   56 (329)
T ss_dssp             CEEEEEEBC-CTTHHHHHHHHHHHC-SEEEEEEEC-SCSSTTCC---CCCCSC------------------------EE-
T ss_pred             ceEEEEEec-hHHHHHHHHHHHhCC-CcEEEEEEc-CCHHHHHHHHHHcCCCc------------------------cc-
Confidence            568999998 999999999998875 599999864 44444444444443211                        11 


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccce-eecccchhHHhhhcCCeEeec-----ccchh
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL-IAGGPFVLPLAHKHNIKILPA-----DSEHS  229 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsL-V~aG~li~~~a~k~~~~IlPV-----DSEHs  229 (369)
                        ..+.++++.+++|.|+.+..-..-..-+.+|+++||.|.+-.-=++ +.-..-+.++|+++|..+.--     +..+.
T Consensus        57 --~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~~p~~~  134 (329)
T 3evn_A           57 --DKLEDMLADESIDVIYVATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLFLMEAQKSVFIPMTQ  134 (329)
T ss_dssp             --SCHHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEEEECSSCSSHHHH
T ss_pred             --CCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHcCCEEEEEEcccCCHHHH
Confidence              2345667777899999999988888899999999998875321111 122445678888888766522     33344


Q ss_pred             hHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhh-hhhhcCCCC
Q 017567          230 AIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFGAEY  308 (369)
Q Consensus       230 AIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIE-A~~LF~i~~  308 (369)
                      .+-++|+...-.+|..+-.+.+. |.                .....|.--++  -..+.|++-|.-.|. ++||||-++
T Consensus       135 ~~~~~i~~g~iG~i~~v~~~~~~-~~----------------~~~~~w~~~~~--~gGG~l~d~g~H~id~~~~l~G~~~  195 (329)
T 3evn_A          135 VIKKLLASGEIGEVISISSTTAY-PN----------------IDHVTWFRELE--LGGGTVHFMAPYALSYLQYLFDATI  195 (329)
T ss_dssp             HHHHHHHTTTTCSEEEEEEEEEC-TT----------------GGGSTTTTCGG--GTCSHHHHHHHHHHHHHHHHTTCCE
T ss_pred             HHHHHHhCCCCCCeEEEEEEecc-CC----------------CCCcccccCcc--cCCcHHHHHHHHHHHHHHHHhCCCc
Confidence            55666665555677777666442 11                11345643222  356778887766554 689999776


Q ss_pred             CceeEEEcC-----CcceeeeEEeccCcE
Q 017567          309 DNIEIIIHP-----QSIIHSMVETQDSSV  332 (369)
Q Consensus       309 d~IevvIHP-----qSiIHsmVef~DGSv  332 (369)
                      ..+....+.     +-..+.+++|.||.+
T Consensus       196 ~~v~~~~~~~~~~~~d~~~~~l~~~~G~~  224 (329)
T 3evn_A          196 THASGTATFPKGQSDSQSKLLLQLSNGVL  224 (329)
T ss_dssp             EEEEEEEECCTTSCCSEEEEEEEETTSCE
T ss_pred             eEEEEEEEeCCCCcceEEEEEEEECCCCE
Confidence            666655432     235678889999865

>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}

Probab=98.12  E-value=0.00013  Score=68.93  Aligned_cols=203  Identities=13%  Similarity=0.166  Sum_probs=134.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      .||+|+|+ |.||..-+..++++| .++|+++. ..|-+.+.+.+++|....++                          
T Consensus         3 ~rvgiIG~-G~~g~~~~~~l~~~~-~~~l~av~-d~~~~~~~~~~~~~~~~~~~--------------------------   53 (344)
T 3ezy_A            3 LRIGVIGL-GRIGTIHAENLKMID-DAILYAIS-DVREDRLREMKEKLGVEKAY--------------------------   53 (344)
T ss_dssp             EEEEEECC-SHHHHHHHHHGGGST-TEEEEEEE-CSCHHHHHHHHHHHTCSEEE--------------------------
T ss_pred             eEEEEEcC-CHHHHHHHHHHHhCC-CcEEEEEE-CCCHHHHHHHHHHhCCCcee--------------------------
Confidence            58999996 999999999998876 49999865 45677777777777532221                          


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccc--eeecccchhHHhhhcCCeEeec-----ccchh
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKET--LIAGGPFVLPLAHKHNIKILPA-----DSEHS  229 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEs--LV~aG~li~~~a~k~~~~IlPV-----DSEHs  229 (369)
                       +.+.++++.+++|.|+.+..-..-..-+.+|+++||.|.+ -|=.  =+..+.-+.++++++|..+..-     +..+.
T Consensus        54 -~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~-EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~  131 (344)
T 3ezy_A           54 -KDPHELIEDPNVDAVLVCSSTNTHSELVIACAKAKKHVFC-EKPLSLNLADVDRMIEETKKADVILFTGFNRRFDRNFK  131 (344)
T ss_dssp             -SSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEE-ESCSCSCHHHHHHHHHHHHHHTCCEEEECGGGGCHHHH
T ss_pred             -CCHHHHhcCCCCCEEEEcCCCcchHHHHHHHHhcCCeEEE-ECCCCCCHHHHHHHHHHHHHhCCcEEEeecccCCHHHH
Confidence             1234556667899999999888888889999999998763 3321  1223455678888888766532     34455


Q ss_pred             hHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhh-hhhhcCCCC
Q 017567          230 AIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFGAEY  308 (369)
Q Consensus       230 AIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIE-A~~LF~i~~  308 (369)
                      .+-++++...-.+|..+..+. ..|..                  |.|.- .+  -..+.|++-|.-.|. ++||||-++
T Consensus       132 ~~k~~i~~G~iG~i~~~~~~~-~~~~~------------------~~~~~-~~--~~GG~l~d~g~H~lDl~~~l~G~~~  189 (344)
T 3ezy_A          132 KLKEAVENGTIGKPHVLRITS-RDPAP------------------PPLDY-IR--VSGGIFLDMTIHDFDMARYIMGEEV  189 (344)
T ss_dssp             HHHHHHHTTTTSSEEEEEEEE-ECSSC------------------CCHHH-HH--TTTCHHHHTHHHHHHHHHHHHSSCE
T ss_pred             HHHHHHHcCCCCCeEEEEEEe-eCCCC------------------CCccc-cc--CCCceEecccchHHHHHHHHcCCCC
Confidence            666666655556676666653 22321                  11110 00  112567777765555 579999777


Q ss_pred             CceeEEEc----C-------CcceeeeEEeccCcE
Q 017567          309 DNIEIIIH----P-------QSIIHSMVETQDSSV  332 (369)
Q Consensus       309 d~IevvIH----P-------qSiIHsmVef~DGSv  332 (369)
                      +++.....    |       .-..+.+++|.||.+
T Consensus       190 ~~V~a~~~~~~~~~~~~~~~~D~~~~~l~~~~G~~  224 (344)
T 3ezy_A          190 EEVFADGSVLVDEEIGKAGDVDTAVVVLRFKSGAL  224 (344)
T ss_dssp             EEEEEEEECCSCHHHHHTTCCSEEEEEEEETTSCE
T ss_pred             eEEEEEeccccccccccCCCCceEEEEEEECCCCE
Confidence            77777542    1       234677899999874

>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}

Probab=98.12  E-value=9.6e-05  Score=72.41  Aligned_cols=221  Identities=12%  Similarity=0.116  Sum_probs=134.9

Q ss_pred             CCCeeEEEEecCCh---HhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCC
Q 017567           74 DGPKPISVLGSTGS---IGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEK  150 (369)
Q Consensus        74 ~~~kkI~ILGSTGS---IGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~  150 (369)
                      ..+.||+|+| +|.   ||..-+..++..+ .|+|++..+..|.++..+.+++|.-.-     ...+.            
T Consensus        35 m~~~rvgiiG-~G~~~~ig~~h~~~~~~~~-~~~lva~v~d~~~~~a~~~a~~~g~~~-----~~~~~------------   95 (417)
T 3v5n_A           35 QKRIRLGMVG-GGSGAFIGAVHRIAARLDD-HYELVAGALSSTPEKAEASGRELGLDP-----SRVYS------------   95 (417)
T ss_dssp             CCCEEEEEES-CC--CHHHHHHHHHHHHTS-CEEEEEEECCSSHHHHHHHHHHHTCCG-----GGBCS------------
T ss_pred             CCcceEEEEc-CCCchHHHHHHHHHHhhCC-CcEEEEEEeCCCHHHHHHHHHHcCCCc-----ccccC------------
Confidence            3456999999 555   9999888887765 499998777889999888888886320     00111            


Q ss_pred             ceEEecHHHHHHHhcC-----CCCCEEEEeccCccCcHHHHHHHHcCCceeeecccce-eecccchhHHhhhcCCeEeec
Q 017567          151 PEILAGEQGVIEAARH-----PDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL-IAGGPFVLPLAHKHNIKILPA  224 (369)
Q Consensus       151 ~~v~~G~~gl~~~~~~-----~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsL-V~aG~li~~~a~k~~~~IlPV  224 (369)
                              .+.++++.     +++|.|+.+..-..-..-+.+|+++||.|.+-.-=++ +.-..-+.++++++|+.+.--
T Consensus        96 --------~~~~ll~~~~~~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~  167 (417)
T 3v5n_A           96 --------DFKEMAIREAKLKNGIEAVAIVTPNHVHYAAAKEFLKRGIHVICDKPLTSTLADAKKLKKAADESDALFVLT  167 (417)
T ss_dssp             --------CHHHHHHHHHHCTTCCSEEEECSCTTSHHHHHHHHHTTTCEEEEESSSCSSHHHHHHHHHHHHHCSSCEEEE
T ss_pred             --------CHHHHHhcccccCCCCcEEEECCCcHHHHHHHHHHHhCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEEEE
Confidence                    12233333     6799999998888888889999999999875322111 112344667888888765421


Q ss_pred             -----ccchhhHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhh
Q 017567          225 -----DSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE  299 (369)
Q Consensus       225 -----DSEHsAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIE  299 (369)
                           +..+..+-++++...-.+|..+-.+-+.+ |+..+.+.       +.-...+|..-++..=+++.|++-|.-.|.
T Consensus       168 ~~~R~~p~~~~~k~~i~~G~iG~i~~v~~~~~~~-~~~~~~~~-------~~~~~~~Wr~~~~~~G~gG~l~d~g~H~lD  239 (417)
T 3v5n_A          168 HNYTGYPMVRQAREMIENGDIGAVRLVQMEYPQD-WLTENIEQ-------SGQKQAAWRTDPARSGAGGSTGDIGTHAYN  239 (417)
T ss_dssp             CGGGGSHHHHHHHHHHHTTTTCSEEEEEEEEECC-TTSCC---------------------------CCHHHHTHHHHHH
T ss_pred             ecccCCHHHHHHHHHHhcCCCCCeEEEEEEEecc-cccCcccc-------ccCCCcCcccCHHHcCCccHHHHHHHHHHH
Confidence                 33444566666655556777776665433 22221110       012234686655554445778888765554


Q ss_pred             -hhhhcCCCCCceeEEEcC-------CcceeeeEEecc
Q 017567          300 -AHYLFGAEYDNIEIIIHP-------QSIIHSMVETQD  329 (369)
Q Consensus       300 -A~~LF~i~~d~IevvIHP-------qSiIHsmVef~D  329 (369)
                       ++||||-+++++......       .-..+.+++|.|
T Consensus       240 l~~~l~G~~~~~V~a~~~~~~~~~~~~D~~~~~l~~~~  277 (417)
T 3v5n_A          240 LGCFVSGLELEELAADLDSFVGGRQLDDNAHVLMRFRE  277 (417)
T ss_dssp             HHHHHHCCCEEEEEEEEECCSTTCCSCCEEEEEEEECC
T ss_pred             HHHHhcCCCceEEEEEEEecCCCCCCceEEEEEEEECC
Confidence             579999877787776542       456788999999

>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*

Probab=98.11  E-value=4.7e-06  Score=80.41  Aligned_cols=146  Identities=23%  Similarity=0.250  Sum_probs=97.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCC------ceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHED------KFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEE  149 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd------~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~  149 (369)
                      +.||+|+| +|.||+..++.+.++++      +++|++++..+ .++..+       .       -...++.+.+..  .
T Consensus         6 ~irvgIiG-~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~-~~~~~~-------~-------~~~~~~~~~~~~--~   67 (331)
T 3c8m_A            6 TINLSIFG-LGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSL-HSYYNE-------R-------IDIGKVISYKEK--G   67 (331)
T ss_dssp             EEEEEEEC-CSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSS-CEEECT-------T-------CCHHHHHHHHHT--T
T ss_pred             EEeEEEEe-cCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECC-hHHhhc-------c-------cChHHHhhhhcc--C
Confidence            35899999 59999999999998763      68999987643 221110       0       001112221111  0


Q ss_pred             CceEEec-HHHHHHHhcCCCCCEEEEeccCc----cCcHHHHHHHHcCCceeeecccceeecccchhHHhhhcCCeEe--
Q 017567          150 KPEILAG-EQGVIEAARHPDAVTVVTGIVGC----AGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKIL--  222 (369)
Q Consensus       150 ~~~v~~G-~~gl~~~~~~~~~D~Vv~AIvG~----aGL~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~~~~Il--  222 (369)
                      .+..+.. .....++. .+++|+|+.+..+.    ....-..+|+++||.|..+||.-+..-++-+.++|+++|+.++  
T Consensus        68 ~~~~~~~~~~d~~~ll-~~~iDvVv~~t~~~~~~~~~~~~~~~AL~aGkhVvtanK~pla~~~~eL~~~A~~~gv~~~~e  146 (331)
T 3c8m_A           68 SLDSLEYESISASEAL-ARDFDIVVDATPASADGKKELAFYKETFENGKDVVTANKSGLANFWPEIMEYARSNNRRIRYE  146 (331)
T ss_dssp             CGGGCCSEECCHHHHH-HSSCSEEEECSCCCSSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCCEECG
T ss_pred             CcccccCCCCCHHHHh-CCCCCEEEECCCCCCccchHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHHcCCEEEEE
Confidence            1110111 11355666 67899999999886    5556788999999999999999887778889999999998775  


Q ss_pred             -------ecccchhhHHHhhcCCCCCccceE
Q 017567          223 -------PADSEHSAIFQCIQGLPEGALRRI  246 (369)
Q Consensus       223 -------PVDSEHsAIfQ~L~g~~~~~v~ki  246 (369)
                             |+   ...+-++|.+.   .|.+|
T Consensus       147 a~vg~giPi---i~~l~~~l~g~---~I~~I  171 (331)
T 3c8m_A          147 ATVAGGVPL---FSFIDYSVLPS---RIKKF  171 (331)
T ss_dssp             GGSSTTSCC---HHHHHHHSTTC---CCCEE
T ss_pred             eecccccHH---HHHHHHHhhcC---cccEE
Confidence                   42   56666777653   45554

>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}

Probab=98.11  E-value=7.8e-05  Score=71.96  Aligned_cols=209  Identities=15%  Similarity=0.132  Sum_probs=134.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      +.||+|+|+-+.+|..-+..++++|+ ++|+|++ ..|-++..+.+++|..+.  .                        
T Consensus         2 ~~rigiiG~G~~~~~~~~~~l~~~~~-~~l~av~-d~~~~~~~~~a~~~g~~~--~------------------------   53 (387)
T 3moi_A            2 KIRFGICGLGFAGSVLMAPAMRHHPD-AQIVAAC-DPNEDVRERFGKEYGIPV--F------------------------   53 (387)
T ss_dssp             CEEEEEECCSHHHHTTHHHHHHHCTT-EEEEEEE-CSCHHHHHHHHHHHTCCE--E------------------------
T ss_pred             ceEEEEEeCCHHHHHHHHHHHHhCCC-eEEEEEE-eCCHHHHHHHHHHcCCCe--E------------------------
Confidence            45899999876999999999998874 9999976 456777777777775431  1                        


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccc-eeecccchhHHhhhcCCeEee-----cccchh
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKET-LIAGGPFVLPLAHKHNIKILP-----ADSEHS  229 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEs-LV~aG~li~~~a~k~~~~IlP-----VDSEHs  229 (369)
                        ..+.++++.+++|.|+.+..-..-..-+.+|+++||.|.+-.-=+ =+.-+.-+.++|+++|..+.-     -+..+.
T Consensus        54 --~~~~ell~~~~vD~V~i~tp~~~H~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~  131 (387)
T 3moi_A           54 --ATLAEMMQHVQMDAVYIASPHQFHCEHVVQASEQGLHIIVEKPLTLSRDEADRMIEAVERAGVHLVVGTSRSHDPVVR  131 (387)
T ss_dssp             --SSHHHHHHHSCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHHHTCCEEECCCGGGSHHHH
T ss_pred             --CCHHHHHcCCCCCEEEEcCCcHHHHHHHHHHHHCCCceeeeCCccCCHHHHHHHHHHHHHhCCeEEEEeccccCHHHH
Confidence              123455556789999999988888888999999999987533211 133456677889998876642     123334


Q ss_pred             hHHHhhcCCCCCccceEEEeecCCCC--CCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhh-hhhhcCC
Q 017567          230 AIFQCIQGLPEGALRRIILTASGGAF--RDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFGA  306 (369)
Q Consensus       230 AIfQ~L~g~~~~~v~kiiLTASGGPF--r~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIE-A~~LF~i  306 (369)
                      .+-++|+...-.+|..+..... ++|  +.+..+.+.            ..+|      .+.|++-|--.|. ++||||-
T Consensus       132 ~~k~~i~~g~iG~i~~~~~~~~-~~~~~~~~~~~~~~------------~~~g------gG~l~d~g~H~id~~~~l~g~  192 (387)
T 3moi_A          132 TLRAIVQEGSVGRVSMLNCFNY-TDFLYRPRRPEELD------------TSKG------GGIIYNQLPHQIDSIKTITGQ  192 (387)
T ss_dssp             HHHHHHHHCTTCCEEEEEEEEE-CCGGGSCCCGGGGC------------GGGT------CSHHHHTHHHHHHHHHHHHCC
T ss_pred             HHHHHHhcCCCCCeEEEEEEec-cccccCCCChhhcc------------cccC------CcchhhhHHHHHHHHHHHhCC
Confidence            4455555433444544433221 222  222211110            0112      3567777655554 6799997


Q ss_pred             CCCceeEEEc---C----CcceeeeEEeccCcEE
Q 017567          307 EYDNIEIIIH---P----QSIIHSMVETQDSSVI  333 (369)
Q Consensus       307 ~~d~IevvIH---P----qSiIHsmVef~DGSv~  333 (369)
                      +++++.....   |    +-.++.+++|.||.+-
T Consensus       193 ~~~~V~a~~~~~~~~~~~~d~~~~~l~f~~G~~~  226 (387)
T 3moi_A          193 RITAVRAMTGRLDPKRPTEGNCAAMLTLEDGACA  226 (387)
T ss_dssp             CEEEEEEEEECCCTTSCSCCEEEEEEEETTSCEE
T ss_pred             CceEEEEEEeecCCCCCcceEEEEEEEECCCCEE
Confidence            7788877762   2    3467899999999653

>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}

Probab=98.11  E-value=0.00024  Score=67.40  Aligned_cols=202  Identities=11%  Similarity=0.173  Sum_probs=129.8

Q ss_pred             CeeEEEEecCChHhHH-HHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEE
Q 017567           76 PKPISVLGSTGSIGTQ-TLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtq-TLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      +.||+|+|. |.||.. -+..++++|+ ++|+|++. .|.+++.   +++.                        .+.++
T Consensus         7 ~~rvgiiG~-G~~g~~~~~~~~~~~~~-~~l~av~d-~~~~~~~---~~~~------------------------~~~~~   56 (352)
T 3kux_A            7 KIKVGLLGY-GYASKTFHAPLIMGTPG-LELAGVSS-SDASKVH---ADWP------------------------AIPVV   56 (352)
T ss_dssp             CEEEEEECC-SHHHHHTHHHHHHTSTT-EEEEEEEC-SCHHHHH---TTCS------------------------SCCEE
T ss_pred             CceEEEECC-CHHHHHHHHHHHhhCCC-cEEEEEEC-CCHHHHH---hhCC------------------------CCceE
Confidence            468999995 999997 8899998876 99999764 4555543   1221                        11222


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecc-cceeecccchhHHhhhcCCeEeec-----ccch
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANK-ETLIAGGPFVLPLAHKHNIKILPA-----DSEH  228 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANK-EsLV~aG~li~~~a~k~~~~IlPV-----DSEH  228 (369)
                         ..+.++++.+++|.|+.+..-..-...+.+|+++||.|.+-.- -.=+.-..-+.++|+++|..+..-     +..+
T Consensus        57 ---~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhV~~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~  133 (352)
T 3kux_A           57 ---SDPQMLFNDPSIDLIVIPTPNDTHFPLAQSALAAGKHVVVDKPFTVTLSQANALKEHADDAGLLLSVFHNRRWDSDF  133 (352)
T ss_dssp             ---SCHHHHHHCSSCCEEEECSCTTTHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHTTCCEEECCGGGGCHHH
T ss_pred             ---CCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCcEEEECCCcCCHHHHHHHHHHHHHcCCeEEEEeecccCHHH
Confidence               2345667777899999999888888999999999999876322 011223456778899988766531     2233


Q ss_pred             hhHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhhh-hhhcCCC
Q 017567          229 SAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEA-HYLFGAE  307 (369)
Q Consensus       229 sAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIEA-~~LF~i~  307 (369)
                      ..+-++|+...-.+|..+-.+-  +.++..              .+++|..=+  .-..+.|++-|.-.|.. +|||| +
T Consensus       134 ~~~~~~i~~g~iG~i~~~~~~~--~~~~~~--------------~~~~w~~~~--~~ggG~l~d~g~H~id~~~~l~G-~  194 (352)
T 3kux_A          134 LTLKTLLAEGSLGNVVYFESHF--DRYRPE--------------IRQRWREQA--GAGGGIWYDLGPHLLDQALQLFG-L  194 (352)
T ss_dssp             HHHHHHHHHTTTCSEEEEEEEE--ECBCCS--------------SCSSCSCC-----CBCHHHHHHHHHHHHHHHHHC-C
T ss_pred             HHHHHHHhcCCCCceEEEEEEE--eccCCC--------------CCcccccCC--CCCCceeehhhhHHHHHHHHHhC-C
Confidence            4455555544444565544332  222211              145676432  33567888888777764 89999 5


Q ss_pred             CCceeEEEc---C----CcceeeeEEeccC
Q 017567          308 YDNIEIIIH---P----QSIIHSMVETQDS  330 (369)
Q Consensus       308 ~d~IevvIH---P----qSiIHsmVef~DG  330 (369)
                      ++.+.....   +    .-..+.+++| +|
T Consensus       195 p~~v~a~~~~~~~~~~~~d~~~~~l~~-~g  223 (352)
T 3kux_A          195 PETLNVDLGMLRPGSQSVDYFHAVLSY-PG  223 (352)
T ss_dssp             CSEEEEEEECCSTTCCSBCEEEEEEEE-TT
T ss_pred             CeEEEEEEEEecCCCCcccEEEEEEEE-CC
Confidence            778887763   2    2356788899 44

>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5

Probab=98.06  E-value=5.6e-05  Score=70.80  Aligned_cols=199  Identities=14%  Similarity=0.138  Sum_probs=132.6

Q ss_pred             eeEEEEecCChHhH-HHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGT-QTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGt-qTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .||+|+|+ |.||. .-+..+.+.| .++|+  .+..|.+++.+.+++|....+ ..+                      
T Consensus         3 ~~igiIG~-G~ig~~~~~~~l~~~~-~~~l~--v~d~~~~~~~~~a~~~g~~~~-~~~----------------------   55 (323)
T 1xea_A            3 LKIAMIGL-GDIAQKAYLPVLAQWP-DIELV--LCTRNPKVLGTLATRYRVSAT-CTD----------------------   55 (323)
T ss_dssp             EEEEEECC-CHHHHHTHHHHHTTST-TEEEE--EECSCHHHHHHHHHHTTCCCC-CSS----------------------
T ss_pred             cEEEEECC-CHHHHHHHHHHHHhCC-CceEE--EEeCCHHHHHHHHHHcCCCcc-ccC----------------------
Confidence            58999997 99998 4788888776 48988  567788888877777764310 000                      


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccce--eecccchhHHhhhcCCeEeec-----ccch
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILPA-----DSEH  228 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsL--V~aG~li~~~a~k~~~~IlPV-----DSEH  228 (369)
                       .   .+++ ..++|.|+.+..-..-...+.+|+++||.|.+ .|-.-  +..+.-+.++++++|..+..-     +..+
T Consensus        56 -~---~~~l-~~~~D~V~i~tp~~~h~~~~~~al~~Gk~V~~-EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~  129 (323)
T 1xea_A           56 -Y---RDVL-QYGVDAVMIHAATDVHSTLAAFFLHLGIPTFV-DKPLAASAQECENLYELAEKHHQPLYVGFNRRHIPLY  129 (323)
T ss_dssp             -T---TGGG-GGCCSEEEECSCGGGHHHHHHHHHHTTCCEEE-ESCSCSSHHHHHHHHHHHHHTTCCEEEECGGGCCHHH
T ss_pred             -H---HHHh-hcCCCEEEEECCchhHHHHHHHHHHCCCeEEE-eCCCcCCHHHHHHHHHHHHhcCCeEEEeeccccCHHH
Confidence             0   1223 34799999999888778888899999998764 45322  223555778888998876642     4455


Q ss_pred             hhHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCC-CCCCCCccceehhhhcchhHHHhh-hhhhcCC
Q 017567          229 SAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHP-NWSMGKKITVDSATLFNKGLEVIE-AHYLFGA  306 (369)
Q Consensus       229 sAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP-~W~MG~KITIDSATmmNKgLEvIE-A~~LF~i  306 (369)
                      ..+-++|+...-.+|..+...... ++.                  | .|         ...|++-|.=.|. ++||||-
T Consensus       130 ~~~~~~i~~g~iG~i~~v~~~~~~-~~~------------------p~~~---------~g~l~d~g~H~id~~~~l~G~  181 (323)
T 1xea_A          130 NQHLSELAQQECGALRSLRWEKHR-HAL------------------PGDI---------RTFVFDDFIHPLDSVNLSRQC  181 (323)
T ss_dssp             HHHCHHHHHTSCTTCSEEEEEEEC-BSC------------------CBCH---------HHHHHTTTHHHHHHHCTTCCC
T ss_pred             HHHHHHHhcCCcCCceEEEEEecC-CCC------------------cccc---------hhhhhhcceeHHHHHHHHhCC
Confidence            666666665444556665544321 110                  1 12         1357777766665 5789998


Q ss_pred             CCCceeEEEc--CCcceeeeEEeccCcEEEec
Q 017567          307 EYDNIEIIIH--PQSIIHSMVETQDSSVIGQL  336 (369)
Q Consensus       307 ~~d~IevvIH--PqSiIHsmVef~DGSv~Aql  336 (369)
                      +++++.....  .+...+.+++|.+|...+.+
T Consensus       182 ~~~~V~a~~~~~~~d~~~~~~~~~~g~~~~~~  213 (323)
T 1xea_A          182 NLDDLHLTYHMSEGLLARLDVQWQTGDTLLHA  213 (323)
T ss_dssp             SCTTEEEEEEEETTEEEEEEEEEEETTEEEEE
T ss_pred             CceEEEEEEeecCCceEEEEEEEcCCCEEEEE
Confidence            8788877654  45677889999988655544

>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}

Probab=98.06  E-value=6.5e-05  Score=71.92  Aligned_cols=206  Identities=13%  Similarity=0.132  Sum_probs=134.9

Q ss_pred             CeeEEEEecCChHhHH-HHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEE
Q 017567           76 PKPISVLGSTGSIGTQ-TLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtq-TLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      +.||+|+|. |.||.. -+..+++.|+ ++|+|++ ..|-+++.+.+++|.-..                        ++
T Consensus         5 ~~rigiIG~-G~~g~~~~~~~l~~~~~-~~l~av~-d~~~~~~~~~a~~~~~~~------------------------~~   57 (359)
T 3m2t_A            5 LIKVGLVGI-GAQMQENLLPSLLQMQD-IRIVAAC-DSDLERARRVHRFISDIP------------------------VL   57 (359)
T ss_dssp             CEEEEEECC-SHHHHHTHHHHHHTCTT-EEEEEEE-CSSHHHHGGGGGTSCSCC------------------------EE
T ss_pred             cceEEEECC-CHHHHHHHHHHHHhCCC-cEEEEEE-cCCHHHHHHHHHhcCCCc------------------------cc
Confidence            468999995 899985 6899998875 9999976 456777666555552111                        11


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccce--eecccchhHHhhhcCCeEee-----cccc
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILP-----ADSE  227 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsL--V~aG~li~~~a~k~~~~IlP-----VDSE  227 (369)
                         ..+.++++.+++|.|+.+..-..-...+.+|+++||.|.+ -|=.-  +.-..-+.++++++|+.+.-     -+..
T Consensus        58 ---~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~-EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~  133 (359)
T 3m2t_A           58 ---DNVPAMLNQVPLDAVVMAGPPQLHFEMGLLAMSKGVNVFV-EKPPCATLEELETLIDAARRSDVVSGVGMNFKFARP  133 (359)
T ss_dssp             ---SSHHHHHHHSCCSEEEECSCHHHHHHHHHHHHHTTCEEEE-CSCSCSSHHHHHHHHHHHHHHTCCEEECCHHHHCHH
T ss_pred             ---CCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCeEEE-ECCCcCCHHHHHHHHHHHHHcCCEEEEEecccCcHH
Confidence               1334555666899999998877777888999999999765 22211  12344566788888876542     2334


Q ss_pred             hhhHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhhh-hhhcCC
Q 017567          228 HSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEA-HYLFGA  306 (369)
Q Consensus       228 HsAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIEA-~~LF~i  306 (369)
                      +..+-+.++...-.+|..+..+-...    .+             ..|.|...+.   ..+.|++-|.-.|.. +||||-
T Consensus       134 ~~~~k~~i~~g~iG~i~~~~~~~~~~----~~-------------~~~~w~~~~~---~gg~l~d~~~H~iD~~~~l~G~  193 (359)
T 3m2t_A          134 VRQLREMTQVDEFGETLHIQLNHYAN----KP-------------RAPLWGLDST---LRSFLLAQAIHTIDLAITFGDG  193 (359)
T ss_dssp             HHHHHHHHTSGGGCCEEEEEEEEECC----CC-------------SSCCTTCSCH---HHHHHHHTHHHHHHHHHHHHCS
T ss_pred             HHHHHHHHHCCCCCCeEEEEEEEecC----CC-------------CCCCcccCCC---ccchhhhcccHHHHHHHHHhCC
Confidence            44555555543334555554443211    11             2477886554   346788888766664 689997


Q ss_pred             CCCceeEEEc---CCcceeeeEEeccCcE
Q 017567          307 EYDNIEIIIH---PQSIIHSMVETQDSSV  332 (369)
Q Consensus       307 ~~d~IevvIH---PqSiIHsmVef~DGSv  332 (369)
                      +++++....+   ..-.++.+++|.||.+
T Consensus       194 ~~~~V~a~~~~~~~~d~~~~~l~~~~G~~  222 (359)
T 3m2t_A          194 ELRRVQSSVQRHDDALIVRADMAFSSGAT  222 (359)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEEEETTSCE
T ss_pred             CceEEEEEeeccCCCeEEEEEEEECCCCE
Confidence            7788877765   3346788999999974

>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}

Probab=98.05  E-value=0.00022  Score=68.33  Aligned_cols=207  Identities=19%  Similarity=0.236  Sum_probs=127.7

Q ss_pred             CCeeEEEEecCChHhHH-HHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceE
Q 017567           75 GPKPISVLGSTGSIGTQ-TLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI  153 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtq-TLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v  153 (369)
                      .+.||+|+|+ |.||.. -+..++++|+ ++|+|++. .|.+++.   +++.                        .+.+
T Consensus         6 ~~~rvgiiG~-G~~g~~~~~~~l~~~~~-~~l~av~d-~~~~~~~---~~~~------------------------~~~~   55 (364)
T 3e82_A            6 NTINIALIGY-GFVGKTFHAPLIRSVPG-LNLAFVAS-RDEEKVK---RDLP------------------------DVTV   55 (364)
T ss_dssp             -CEEEEEECC-SHHHHHTHHHHHHTSTT-EEEEEEEC-SCHHHHH---HHCT------------------------TSEE
T ss_pred             CcceEEEECC-CHHHHHHHHHHHhhCCC-eEEEEEEc-CCHHHHH---hhCC------------------------CCcE
Confidence            3569999998 999996 8888988875 99999764 4555543   1221                        1122


Q ss_pred             EecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeeccc--ceeecccchhHHhhhcCCeEeec-----cc
Q 017567          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKE--TLIAGGPFVLPLAHKHNIKILPA-----DS  226 (369)
Q Consensus       154 ~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKE--sLV~aG~li~~~a~k~~~~IlPV-----DS  226 (369)
                      +   ..+.++++.+++|.|+.+..-..-...+.+|+++||.|.+ -|=  .=+.-..-+.++|+++|..+..-     +.
T Consensus        56 ~---~~~~~ll~~~~~D~V~i~tp~~~H~~~~~~al~aGk~Vl~-EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p  131 (364)
T 3e82_A           56 I---ASPEAAVQHPDVDLVVIASPNATHAPLARLALNAGKHVVV-DKPFTLDMQEARELIALAEEKQRLLSVFHNRRWDS  131 (364)
T ss_dssp             E---SCHHHHHTCTTCSEEEECSCGGGHHHHHHHHHHTTCEEEE-CSCSCSSHHHHHHHHHHHHHTTCCEEECCCCTTCH
T ss_pred             E---CCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCcEEE-eCCCcCCHHHHHHHHHHHHHhCCeEEEEeecccCH
Confidence            2   2345667777899999999888888999999999999765 452  12233455678888988766532     33


Q ss_pred             chhhHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhh-hhhhcC
Q 017567          227 EHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFG  305 (369)
Q Consensus       227 EHsAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIE-A~~LF~  305 (369)
                      .+..+-++|+...-.+|..+-..  -+-++...              .++|..=+  .-..+.|++-|--.|. ++||||
T Consensus       132 ~~~~~~~~i~~g~iG~i~~~~~~--~~~~~~~~--------------~~~w~~~~--~~ggG~l~d~g~H~id~~~~l~G  193 (364)
T 3e82_A          132 DYLGIRQVIEQGTLGAVKHFESH--FDRFRPEV--------------RVRWREQN--VPGSGLWFDLGPHLIDQALQLFG  193 (364)
T ss_dssp             HHHHHHHHHHHTTTCSEEEEEEE--EECBCCCC---------------------------CCHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHcCCCcceEEEEEE--eeccCCCC--------------CcccccCC--CCCCChHHhhhhHHHHHHHHHhC
Confidence            34455566654444456554433  22222111              24676432  3356788888877776 589999


Q ss_pred             CCCCceeEEEcC-------CcceeeeEEeccCcEEE
Q 017567          306 AEYDNIEIIIHP-------QSIIHSMVETQDSSVIG  334 (369)
Q Consensus       306 i~~d~IevvIHP-------qSiIHsmVef~DGSv~A  334 (369)
                       +++.+......       +-..+.+++|.|.....
T Consensus       194 -~p~~V~a~~~~~~~~~~~~d~~~~~l~~~~~~~~~  228 (364)
T 3e82_A          194 -LPQSVQGNIATLRDGAEINDWAHVVLNYPAHKVIL  228 (364)
T ss_dssp             -CCSEEEEEEECCSTTCCSCCEEEEEEECSSCEEEE
T ss_pred             -CCeEEEEEEEeecCCCCcccEEEEEEEECCEEEEE
Confidence             57788777531       22467777887744333

>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}

Probab=97.97  E-value=0.00033  Score=67.04  Aligned_cols=205  Identities=10%  Similarity=0.159  Sum_probs=132.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      +.||+|+|. |.||..-+..+++.| .++|+|++- .|-+++ +.++++..+.                         + 
T Consensus         5 ~~~vgiiG~-G~~g~~~~~~l~~~~-~~~l~av~d-~~~~~~-~~a~~~g~~~-------------------------~-   54 (359)
T 3e18_A            5 KYQLVIVGY-GGMGSYHVTLASAAD-NLEVHGVFD-ILAEKR-EAAAQKGLKI-------------------------Y-   54 (359)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHTST-TEEEEEEEC-SSHHHH-HHHHTTTCCB-------------------------C-
T ss_pred             cCcEEEECc-CHHHHHHHHHHHhCC-CcEEEEEEc-CCHHHH-HHHHhcCCce-------------------------e-
Confidence            458999996 999999999999876 599999764 456654 3455544311                         1 


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccce--eecccchhHHhhhcCCeEee-----cccch
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILP-----ADSEH  228 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsL--V~aG~li~~~a~k~~~~IlP-----VDSEH  228 (369)
                        ..+.++++.+++|.|+.+..-..-..-+.+|+++||.|..- |=.-  +.-..-+.++|+++|..+.-     -+..+
T Consensus        55 --~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGkhVl~E-KP~a~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~  131 (359)
T 3e18_A           55 --ESYEAVLADEKVDAVLIATPNDSHKELAISALEAGKHVVCE-KPVTMTSEDLLAIMDVAKRVNKHFMVHQNRRWDEDF  131 (359)
T ss_dssp             --SCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEE-SSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGCHHH
T ss_pred             --CCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCEEee-CCCcCCHHHHHHHHHHHHHhCCeEEEEeeeccCHHH
Confidence              23356666678999999998888888899999999987642 2211  22345567888888876542     23444


Q ss_pred             hhHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhh-hhhhcCCC
Q 017567          229 SAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFGAE  307 (369)
Q Consensus       229 sAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIE-A~~LF~i~  307 (369)
                      ..+-+.|+...-.+|..+-..-.+  ++..               .++|..=+.  -..+.|++-|.-.|. ++||||-+
T Consensus       132 ~~~k~~i~~g~iG~i~~~~~~~~~--~~~~---------------~~~wr~~~~--~gGG~l~d~g~H~iD~~~~l~G~~  192 (359)
T 3e18_A          132 LIIKEMFEQKTIGEMFHLESRVHG--ANGI---------------PGDWRHLKA--HGGGMVLDWGVHLLDQLLFLVDSN  192 (359)
T ss_dssp             HHHHHHHHHTTTSSEEEEEEEEEC--SSCS---------------CSSGGGCGG--GTCSHHHHTHHHHHHHHHHHCCSC
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEec--CCCC---------------CCCcccCcC--CCCcHHHHHhhHHHHHHHHHhCCC
Confidence            455556654444455544333222  2211               135643221  245678888766665 57999976


Q ss_pred             CCceeEEEcC------CcceeeeEEeccCcE
Q 017567          308 YDNIEIIIHP------QSIIHSMVETQDSSV  332 (369)
Q Consensus       308 ~d~IevvIHP------qSiIHsmVef~DGSv  332 (369)
                      ++.+......      +-..+.+++|.||.+
T Consensus       193 ~~~v~a~~~~~~~~~~~d~~~~~l~~~~G~~  223 (359)
T 3e18_A          193 VKSVSANLSFALGDEVDDGFVTFITFENGIT  223 (359)
T ss_dssp             EEEEEEEEECTTCCSSCSEEEEEEEETTSCE
T ss_pred             CeEEEEEEEecCCCCCCceEEEEEEECCCCE
Confidence            6776665432      235788899999864

>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}

Probab=97.95  E-value=0.00028  Score=67.74  Aligned_cols=213  Identities=10%  Similarity=0.098  Sum_probs=137.1

Q ss_pred             CeeEEEEecCChHhHH-HHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC-CCEEEEcCchhHHHHHHHHhcCCCCceE
Q 017567           76 PKPISVLGSTGSIGTQ-TLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK-PQVVAVRNESLLDEIKEALANVEEKPEI  153 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtq-TLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~Fk-P~~V~v~de~~~~~l~~~l~~~~~~~~v  153 (369)
                      +.||+|+| +|.+|.. -+..++.  +.++|+|++- .|.++..+.+++|. ++..                        
T Consensus        26 ~irvgiiG-~G~~~~~~~~~~~~~--~~~~lvav~d-~~~~~a~~~a~~~~~~~~~------------------------   77 (361)
T 3u3x_A           26 ELRFAAVG-LNHNHIYGQVNCLLR--AGARLAGFHE-KDDALAAEFSAVYADARRI------------------------   77 (361)
T ss_dssp             CCEEEEEC-CCSTTHHHHHHHHHH--TTCEEEEEEC-SCHHHHHHHHHHSSSCCEE------------------------
T ss_pred             CcEEEEEC-cCHHHHHHHHHHhhc--CCcEEEEEEc-CCHHHHHHHHHHcCCCccc------------------------
Confidence            46899999 5889965 4566653  4699999764 57888887788775 2211                        


Q ss_pred             EecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccc-eeecccchhHHhhhcCCeEeec-----c-c
Q 017567          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKET-LIAGGPFVLPLAHKHNIKILPA-----D-S  226 (369)
Q Consensus       154 ~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEs-LV~aG~li~~~a~k~~~~IlPV-----D-S  226 (369)
                          ..+.++++.+++|.|+.+..-..-..-+.+|+++||.|.+-.-=+ =+.-..-+.++|+++|..+.--     | .
T Consensus        78 ----~~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~v~~~~R~~~p  153 (361)
T 3u3x_A           78 ----ATAEEILEDENIGLIVSAAVSSERAELAIRAMQHGKDVLVDKPGMTSFDQLAKLRRVQAETGRIFSILYSEHFESP  153 (361)
T ss_dssp             ----SCHHHHHTCTTCCEEEECCCHHHHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHTTCCCEEEECHHHHTCH
T ss_pred             ----CCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEechHhhCCH
Confidence                133566677789999988877777788999999999987643211 1223555778899988876543     3 3


Q ss_pred             chhhHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhh-hhhhcC
Q 017567          227 EHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFG  305 (369)
Q Consensus       227 EHsAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIE-A~~LF~  305 (369)
                      .+..+-++|+...-.+|..+..+.   ++| +..           -..|+|..-++  ...+.|++-|--.|. ++||||
T Consensus       154 ~~~~~k~~i~~g~iG~i~~~~~~~---~~~-~~~-----------~~~~~w~~~~~--~~GG~l~d~g~H~iD~~~~l~G  216 (361)
T 3u3x_A          154 ATVKAGELVAAGAIGEVVHIVGLG---PHR-LRR-----------ETRPDWFFRRA--DYGGILTDIASHQCEQFLFFTG  216 (361)
T ss_dssp             HHHHHHHHHHTTTTSSEEEEEEEE---ECC-CCG-----------GGSCGGGTCHH--HHCCHHHHHSHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHcCCCCCeEEEEEec---ccc-cCC-----------CCCCCcccCcC--ccCchHHhhhhHHHHHHHHHhC
Confidence            445566666655555666554432   232 111           13467754332  235788888776664 789999


Q ss_pred             CCCCc-eeEEE----cC-----CcceeeeEEeccCcEEEecC
Q 017567          306 AEYDN-IEIII----HP-----QSIIHSMVETQDSSVIGQLG  337 (369)
Q Consensus       306 i~~d~-IevvI----HP-----qSiIHsmVef~DGSv~Aql~  337 (369)
                      -++.+ +....    +|     +-..+.+++|.||......+
T Consensus       217 ~~~~~~v~a~~~~~~~~~~~~~~d~~~~~l~~~~G~~~~~~s  258 (361)
T 3u3x_A          217 VNDATVLSASVGNQSVPDAPELQDTGSIHLSTGRTTGMIHVN  258 (361)
T ss_dssp             CSCCEEEEEEEECCSCTTSTTSCCEEEEEEECSSCEEEEEEE
T ss_pred             CCCeEEEEEEeecccCCCCCCCCceEEEEEEECCceEEEEEE
Confidence            75433 44443    33     23567899999997444443

>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}

Probab=97.84  E-value=0.0002  Score=67.24  Aligned_cols=206  Identities=13%  Similarity=0.147  Sum_probs=131.9

Q ss_pred             CeeEEEEecCChHhH-HHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC-CCEEEEcCchhHHHHHHHHhcCCCCceE
Q 017567           76 PKPISVLGSTGSIGT-QTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK-PQVVAVRNESLLDEIKEALANVEEKPEI  153 (369)
Q Consensus        76 ~kkI~ILGSTGSIGt-qTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~Fk-P~~V~v~de~~~~~l~~~l~~~~~~~~v  153 (369)
                      +.||+|+|. |.+|. .-+..+++ + .++|++++-. |.+++.+.+++|. ++                         +
T Consensus         4 ~~rvgiiG~-G~~~~~~~~~~l~~-~-~~~lvav~d~-~~~~~~~~a~~~~~~~-------------------------~   54 (336)
T 2p2s_A            4 KIRFAAIGL-AHNHIYDMCQQLID-A-GAELAGVFES-DSDNRAKFTSLFPSVP-------------------------F   54 (336)
T ss_dssp             CCEEEEECC-SSTHHHHHHHHHHH-T-TCEEEEEECS-CTTSCHHHHHHSTTCC-------------------------B
T ss_pred             ccEEEEECC-ChHHHHHhhhhhcC-C-CcEEEEEeCC-CHHHHHHHHHhcCCCc-------------------------c
Confidence            458999996 78886 44555543 3 6999997653 4555555555552 21                         1


Q ss_pred             EecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeeccccee--ecccchhHHhhhcCCeEeec-----cc
Q 017567          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLI--AGGPFVLPLAHKHNIKILPA-----DS  226 (369)
Q Consensus       154 ~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV--~aG~li~~~a~k~~~~IlPV-----DS  226 (369)
                      +   ..+.++++.+++|.|+.+..-..-..-+.+|+++||.|.+ .|=.-.  .-..-+.++|+++|..+.--     +.
T Consensus        55 ~---~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGkhVl~-EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p  130 (336)
T 2p2s_A           55 A---ASAEQLITDASIDLIACAVIPCDRAELALRTLDAGKDFFT-AKPPLTTLEQLDAVQRRVAETGRKFAVYFNERINV  130 (336)
T ss_dssp             C---SCHHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEE-CSSCCSCHHHHHHHHHHHHHHCCCEEECCTTTTTC
T ss_pred             c---CCHHHHhhCCCCCEEEEeCChhhHHHHHHHHHHCCCcEEE-eCCCCCCHHHHHHHHHHHHHcCCEEEEeeccccCc
Confidence            1   1345667777899999999888888889999999998765 553222  22445677888999877632     44


Q ss_pred             c-hhhHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhh-hhhhc
Q 017567          227 E-HSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLF  304 (369)
Q Consensus       227 E-HsAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIE-A~~LF  304 (369)
                      . +..+-+.|+...-.+|..+-...   ++|..+             ..|+|..-+.  ...+.|++-|--.|. ++|||
T Consensus       131 ~~~~~~~~~i~~g~iG~i~~v~~~~---~~~~~~-------------~~~~w~~~~~--~~gG~l~d~g~H~id~~~~l~  192 (336)
T 2p2s_A          131 DSALFAGELVQRGEIGRVIQTMGVG---PHRERG-------------ARPDWFYQKR--QYGGILCDIGIHQIEQFLYFT  192 (336)
T ss_dssp             HHHHHHHHHHHTTTTSSEEEEEEEE---ECBCCS-------------CCCGGGGCHH--HHCCHHHHTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCceEEEEEEc---cccCCC-------------CCCCceeccc--ccCCeeehhhhhHHHHHHHHh
Confidence            4 66666777655555666665432   222111             2466754322  134678888877777 68999


Q ss_pred             CCC-CCceeEEE----cC-----CcceeeeEEeccCcE
Q 017567          305 GAE-YDNIEIII----HP-----QSIIHSMVETQDSSV  332 (369)
Q Consensus       305 ~i~-~d~IevvI----HP-----qSiIHsmVef~DGSv  332 (369)
                      |-+ ++.+....    +|     +-..+.+++|.||.+
T Consensus       193 G~~~~~~v~a~~~~~~~~~~~~~~d~~~~~l~~~~G~~  230 (336)
T 2p2s_A          193 GNTNARVVTSQTANYHHPHHPEFEDFGDAMLLGDNGAT  230 (336)
T ss_dssp             TCSCEEEEEEEEECSSCTTSTTCCSEEEEEEEETTSCE
T ss_pred             CCCCceEEEEeEEeecCCCCCCccchheEEEEECCCcE
Confidence            976 45555544    23     235678889999853

>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}

Probab=97.83  E-value=8.7e-05  Score=70.30  Aligned_cols=220  Identities=11%  Similarity=0.046  Sum_probs=135.1

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEE
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      .|.||+|+|+.|+||..-+..+++.  .++|+|++-.+ -+. .+..++| |..-+..+   ++++-+.           
T Consensus         2 ~mirvgiIG~gG~i~~~h~~~l~~~--~~~lvav~d~~-~~~-~~~~~~~-~~~~~~~~---~~~ll~~-----------   62 (318)
T 3oa2_A            2 HMKNFALIGAAGYIAPRHMRAIKDT--GNCLVSAYDIN-DSV-GIIDSIS-PQSEFFTE---FEFFLDH-----------   62 (318)
T ss_dssp             -CCEEEEETTTSSSHHHHHHHHHHT--TCEEEEEECSS-CCC-GGGGGTC-TTCEEESS---HHHHHHH-----------
T ss_pred             CceEEEEECCCcHHHHHHHHHHHhC--CCEEEEEEcCC-HHH-HHHHhhC-CCCcEECC---HHHHHHh-----------
Confidence            3679999999999999999999986  58999987533 222 1122222 22222222   2222111           


Q ss_pred             ecHHHHHHHh--cCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccc--eeecccchhHHhhhcCCeEee-c----c
Q 017567          155 AGEQGVIEAA--RHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKET--LIAGGPFVLPLAHKHNIKILP-A----D  225 (369)
Q Consensus       155 ~G~~gl~~~~--~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEs--LV~aG~li~~~a~k~~~~IlP-V----D  225 (369)
                           +.++.  ..+++|.|+.+..-..=..-+.+|+++||.|.+= |=.  =+.-..-+.++++++|..+.. -    +
T Consensus        63 -----~~~l~~~~~~~vD~V~I~tP~~~H~~~~~~al~aGkhVl~E-KPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~  136 (318)
T 3oa2_A           63 -----ASNLKRDSATALDYVSICSPNYLHYPHIAAGLRLGCDVICE-KPLVPTPEMLDQLAVIERETDKRLYNILQLRHH  136 (318)
T ss_dssp             -----HHHHTTSTTTSCCEEEECSCGGGHHHHHHHHHHTTCEEEEC-SSCCSCHHHHHHHHHHHHHHTCCEEECCGGGGC
T ss_pred             -----hhhhhhccCCCCcEEEECCCcHHHHHHHHHHHHCCCeEEEE-CCCcCCHHHHHHHHHHHHHhCCEEEEEEhhhcC
Confidence                 01121  3578999999998888888899999999997642 221  122244567888888876643 2    3


Q ss_pred             cchhhHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhh-hhhhc
Q 017567          226 SEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLF  304 (369)
Q Consensus       226 SEHsAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIE-A~~LF  304 (369)
                      .....+-+.++...-.+|..+-.+-..  .|  +..           ...+|..=+.  ...+.|+|-|--.|. ++|||
T Consensus       137 p~~~~~k~~i~~g~iG~i~~v~~~~~~--~~--~~~-----------~~~~w~~~~~--~~gG~l~d~g~H~id~~~~l~  199 (318)
T 3oa2_A          137 QAIIALKDKVAREKSPHKYEVDLTYIT--SR--GNW-----------YLKSWKGDPR--KSFGVATNIGVHFYDMLHFIF  199 (318)
T ss_dssp             HHHHHHHHHHHHS-CSSCEEEEEEEEE--CC--CHH-----------HHHSGGGCHH--HHCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCceEEEEEEEEe--cC--CCC-----------CCcccccCCC--cCCCccccCCcHHHHHHHHHh
Confidence            334444455554334456665554321  11  100           0134653222  134678888766665 57899


Q ss_pred             CCCCCceeEEEcCCcceeeeEEeccCcEEEecC
Q 017567          305 GAEYDNIEIIIHPQSIIHSMVETQDSSVIGQLG  337 (369)
Q Consensus       305 ~i~~d~IevvIHPqSiIHsmVef~DGSv~Aql~  337 (369)
                      |-| .++.+-+..+-..+.+++|.+|.+-..++
T Consensus       200 G~~-~~v~~~~~~~d~~~~~l~~~~g~~~~~~s  231 (318)
T 3oa2_A          200 GKL-QRNVVHFTSEYKTAGYLEYEQARVRWFLS  231 (318)
T ss_dssp             CSE-EEEEEEEECSSEEEEEEEETTEEEEEEEE
T ss_pred             CCC-ceEEEEecCCcEEEEEEEeCCCeEEEEEE
Confidence            964 46777777888999999999998877766

>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}

Probab=97.82  E-value=0.00011  Score=69.43  Aligned_cols=207  Identities=13%  Similarity=0.137  Sum_probs=129.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec---CCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCce
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG---SNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPE  152 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag---~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~  152 (369)
                      +.||+|+|+ |.||..-+..+   .+.++|+|++..   .+.+++++.+++|....-+.                     
T Consensus         2 ~~rvgiiG~-G~~~~~~~~~l---~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~---------------------   56 (337)
T 3ip3_A            2 SLKICVIGS-SGHFRYALEGL---DEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKY---------------------   56 (337)
T ss_dssp             CEEEEEECS-SSCHHHHHTTC---CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEEC---------------------
T ss_pred             ceEEEEEcc-chhHHHHHHhc---CCCcEEEEEecCCchhhHHHHHHHHHHcCCCCccc---------------------
Confidence            358999996 67777666655   567999999875   45678888888776421111                     


Q ss_pred             EEecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceee--cccchhHHhhhcCCeE-eec-----
Q 017567          153 ILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIA--GGPFVLPLAHKHNIKI-LPA-----  224 (369)
Q Consensus       153 v~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~--aG~li~~~a~k~~~~I-lPV-----  224 (369)
                           ..+.++++.+++|.|+.+..-..-...+.+|+++||.|. .-|=.-..  -..-+.++|+++|..+ +=|     
T Consensus        57 -----~~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl-~EKPla~~~~ea~~l~~~a~~~g~~~~~~v~~~~R  130 (337)
T 3ip3_A           57 -----NNWWEMLEKEKPDILVINTVFSLNGKILLEALERKIHAF-VEKPIATTFEDLEKIRSVYQKVRNEVFFTAMFGIR  130 (337)
T ss_dssp             -----SSHHHHHHHHCCSEEEECSSHHHHHHHHHHHHHTTCEEE-ECSSSCSSHHHHHHHHHHHHHHTTTCCEEECCGGG
T ss_pred             -----CCHHHHhcCCCCCEEEEeCCcchHHHHHHHHHHCCCcEE-EeCCCCCCHHHHHHHHHHHHHhCCceEEEeccccc
Confidence                 123445555679999998777777778999999999975 44533222  3555778889988762 222     


Q ss_pred             -ccchhhHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhh-hhh
Q 017567          225 -DSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHY  302 (369)
Q Consensus       225 -DSEHsAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIE-A~~  302 (369)
                       +..+..+-++++...-.+|..+-...+. ++..                .|.|-.-+  .-..+.|++-|--.|. ++|
T Consensus       131 ~~p~~~~~k~~i~~g~iG~i~~i~~~~~~-~~~~----------------~~~~~~~~--~~~gG~l~d~g~H~iD~~~~  191 (337)
T 3ip3_A          131 YRPHFLTAKKLVSEGAVGEIRLVNTQKSY-KLGQ----------------RPDFYKKR--ETYGGTIPWVGIHAIDWIHW  191 (337)
T ss_dssp             GSHHHHHHHHHHHHTTTSSEEEEEEEEEB-CCCS----------------CCGGGGSH--HHHCCHHHHTTHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhcCCccceEEEEEEecc-cCCC----------------Ccchhhcc--cccCCchhhcchHHHHHHHH
Confidence             3445555566654455566665544332 1111                23342111  1124567777665555 589


Q ss_pred             hcCCCCCceeEEEcC---------CcceeeeEEeccCcE
Q 017567          303 LFGAEYDNIEIIIHP---------QSIIHSMVETQDSSV  332 (369)
Q Consensus       303 LF~i~~d~IevvIHP---------qSiIHsmVef~DGSv  332 (369)
                      |||-+++++......         +-..+.+++|.||.+
T Consensus       192 l~G~~~~~V~a~~~~~~~~~~~~~~d~~~~~l~~~~G~~  230 (337)
T 3ip3_A          192 ITGKKFLSVYATHSRLHNSGHGELETTALCHFTLENEVF  230 (337)
T ss_dssp             HHCCCEEEEEEEEECTTCTTCTTCCSEEEEEEEEGGGEE
T ss_pred             hcCCCceEEEEEecccccCCCCCcceEEEEEEEECCCcE
Confidence            999877777665321         235788999999864

>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}

Probab=97.82  E-value=0.00077  Score=62.85  Aligned_cols=195  Identities=18%  Similarity=0.227  Sum_probs=121.3

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEE
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      .+.||+|+|+ |.||..-+..++++| .++++++.. .|-+.+.    ++.-+ +.                      ++
T Consensus         9 ~~~~igiIG~-G~~g~~~~~~l~~~~-~~~~v~v~d-~~~~~~~----~~~~~-~~----------------------~~   58 (315)
T 3c1a_A            9 SPVRLALIGA-GRWGKNYIRTIAGLP-GAALVRLAS-SNPDNLA----LVPPG-CV----------------------IE   58 (315)
T ss_dssp             CCEEEEEEEC-TTTTTTHHHHHHHCT-TEEEEEEEE-SCHHHHT----TCCTT-CE----------------------EE
T ss_pred             CcceEEEECC-cHHHHHHHHHHHhCC-CcEEEEEEe-CCHHHHH----HHHhh-Cc----------------------cc
Confidence            3468999998 999999999998876 499998765 4555442    23222 11                      11


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeeccccee--ecccchhHHhhhcCCeEeec-ccchhhH
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLI--AGGPFVLPLAHKHNIKILPA-DSEHSAI  231 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV--~aG~li~~~a~k~~~~IlPV-DSEHsAI  231 (369)
                         ..+.++++.+++|+|+.+..-..-..-+.+|+++||.|. ..|=.-.  ..+.-+.++++++|..+..- -.-++..
T Consensus        59 ---~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk~v~-~eKP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~  134 (315)
T 3c1a_A           59 ---SDWRSVVSAPEVEAVIIATPPATHAEITLAAIASGKAVL-VEKPLTLDLAEAEAVAAAAKATGVMVWVEHTQLFNPA  134 (315)
T ss_dssp             ---SSTHHHHTCTTCCEEEEESCGGGHHHHHHHHHHTTCEEE-EESSSCSCHHHHHHHHHHHHHHCCCEEEECGGGGCHH
T ss_pred             ---CCHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHCCCcEE-EcCCCcCCHHHHHHHHHHHHHcCCEEEEeechhcCHH
Confidence               123455666689999999988887888999999999876 3553322  23455778888888876532 2223333


Q ss_pred             HHhhcCC--CCCccceEEEee-cCCCCCCCChhhhccCCHHHhhcCCCC-CCCCccceehhhhcchhHHHhh-hhhhcCC
Q 017567          232 FQCIQGL--PEGALRRIILTA-SGGAFRDWPVEKLKEVKVADALKHPNW-SMGKKITVDSATLFNKGLEVIE-AHYLFGA  306 (369)
Q Consensus       232 fQ~L~g~--~~~~v~kiiLTA-SGGPFr~~~~e~l~~vT~~dALkHP~W-~MG~KITIDSATmmNKgLEvIE-A~~LF~i  306 (369)
                      ||-++..  .-.+|..+-... ..+|                      | ..|      .+.|++-|--.|. ++||||-
T Consensus       135 ~~~~~~~i~~lG~i~~v~~~~~~~~~----------------------~~~~g------gG~l~d~g~H~id~~~~l~G~  186 (315)
T 3c1a_A          135 WEALKADLTSIGPILAVRSEAGNHGP----------------------YRPGG------VPMLWDWGAHDVSMVLDLMGR  186 (315)
T ss_dssp             HHHHHHTHHHHCSEEEEEEEEEEECC----------------------CCTTC------CCHHHHHHHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHcCCeEEEEEEEecCCC----------------------ccccC------CcchhhhhchHHHHHHHHhCC
Confidence            4433311  222455544442 2222                      3 111      3567777777666 5899997


Q ss_pred             CCCceeEEEcC--------CcceeeeEEeccCcE
Q 017567          307 EYDNIEIIIHP--------QSIIHSMVETQDSSV  332 (369)
Q Consensus       307 ~~d~IevvIHP--------qSiIHsmVef~DGSv  332 (369)
                      +++++......        +-..+.+++| ||.+
T Consensus       187 ~~~~v~a~~~~~~~~~~~~~d~~~~~l~~-~g~~  219 (315)
T 3c1a_A          187 DPDSTSASWAARGEKDGGEAGDVTLTLAF-STVE  219 (315)
T ss_dssp             CCSEEEEEEEEEEEETTEEEEEEEEEEEE-TTEE
T ss_pred             CCcEEEEEeEeecCCCCCCCceEEEEEEE-CCEE
Confidence            67777765431        2346677888 7753

>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A

Probab=97.78  E-value=0.0015  Score=62.25  Aligned_cols=202  Identities=16%  Similarity=0.255  Sum_probs=127.7

Q ss_pred             CeeEEEEecCChHhHH-HHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEE
Q 017567           76 PKPISVLGSTGSIGTQ-TLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtq-TLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      +.||+|+|. |+||.. -+..++++|+ ++|+|++. .|.+++   .++|. .                       +.++
T Consensus         5 ~~rvgiiG~-G~~g~~~~~~~l~~~~~-~~l~av~d-~~~~~~---~~~~~-~-----------------------~~~~   54 (358)
T 3gdo_A            5 TIKVGILGY-GLSGSVFHGPLLDVLDE-YQISKIMT-SRTEEV---KRDFP-D-----------------------AEVV   54 (358)
T ss_dssp             CEEEEEECC-SHHHHHTTHHHHTTCTT-EEEEEEEC-SCHHHH---HHHCT-T-----------------------SEEE
T ss_pred             cceEEEEcc-CHHHHHHHHHHHhhCCC-eEEEEEEc-CCHHHH---HhhCC-C-----------------------CceE
Confidence            468999997 999996 7888888765 99999765 455542   22331 1                       1122


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeeccc--ceeecccchhHHhhhcCCeEee-----cccc
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKE--TLIAGGPFVLPLAHKHNIKILP-----ADSE  227 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKE--sLV~aG~li~~~a~k~~~~IlP-----VDSE  227 (369)
                         ..+.++++.+++|.|+.+..-..-..-+.+|+++||.|.+ -|=  .=+.-..-+.++|+++|..+..     -+..
T Consensus        55 ---~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~-EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~  130 (358)
T 3gdo_A           55 ---HELEEITNDPAIELVIVTTPSGLHYEHTMACIQAGKHVVM-EKPMTATAEEGETLKRAADEKGVLLSVYHNRRWDND  130 (358)
T ss_dssp             ---SSTHHHHTCTTCCEEEECSCTTTHHHHHHHHHHTTCEEEE-ESSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGSHH
T ss_pred             ---CCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHcCCeEEE-ecCCcCCHHHHHHHHHHHHHcCCeEEEeeecccCHH
Confidence               2345667777899999999888888999999999999876 332  1123345577888888876653     2334


Q ss_pred             hhhHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhh-hhhhcCC
Q 017567          228 HSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFGA  306 (369)
Q Consensus       228 HsAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIE-A~~LF~i  306 (369)
                      +..+-++++...-.+|..+-.+-  +-++...              .+.|..=+  .-..+.|++-|.-.|. ++|||| 
T Consensus       131 ~~~~k~~i~~g~iG~i~~~~~~~--~~~~~~~--------------~~~w~~~~--~~ggG~l~d~g~H~id~~~~l~G-  191 (358)
T 3gdo_A          131 FLTIKKLISEGSLEDINTYQVSY--NRYRPEV--------------QARWREKE--GTATGTLYDLGSHIIDQTLHLFG-  191 (358)
T ss_dssp             HHHHHHHHHTTSSCSCCEEEEEC--CCBCCCC--------------------------CCSHHHHTHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHhcCCCCceEEEEEEE--eccCCCC--------------CcccccCC--CCCCceeeeehhHHHHHHHHHcC-
Confidence            45555666655555666654432  2222111              13475321  2245778888776666 579999 


Q ss_pred             CCCceeEEEcC-------CcceeeeEEeccC
Q 017567          307 EYDNIEIIIHP-------QSIIHSMVETQDS  330 (369)
Q Consensus       307 ~~d~IevvIHP-------qSiIHsmVef~DG  330 (369)
                      +++++......       .-..+.+++|.|.
T Consensus       192 ~~~~V~a~~~~~~~~~~~~d~~~~~l~~~~~  222 (358)
T 3gdo_A          192 MPKAVTANVMAQRENAETVDYFHLTLDYGKL  222 (358)
T ss_dssp             CCSEEEEEEECCSTTCCSCCEEEEEEEETTE
T ss_pred             CCeEEEEEEEeecCCCCcCceEEEEEEECCE
Confidence            78888887542       2356778888873

>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*

Probab=97.77  E-value=0.00027  Score=69.76  Aligned_cols=214  Identities=17%  Similarity=0.191  Sum_probs=136.6

Q ss_pred             CCCeeEEEEecCChHhH-HHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCE--EEEcCchhHHHHHHHHhcCCCC
Q 017567           74 DGPKPISVLGSTGSIGT-QTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQV--VAVRNESLLDEIKEALANVEEK  150 (369)
Q Consensus        74 ~~~kkI~ILGSTGSIGt-qTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~--V~v~de~~~~~l~~~l~~~~~~  150 (369)
                      ..+.||+|+|+ |.||. .-+..+++++ .++|++++ ..|-+.+.+.+++|....  +.+.                  
T Consensus        81 ~~~irigiIG~-G~~g~~~~~~~l~~~~-~~~lvav~-d~~~~~~~~~a~~~g~~~~~~~~~------------------  139 (433)
T 1h6d_A           81 DRRFGYAIVGL-GKYALNQILPGFAGCQ-HSRIEALV-SGNAEKAKIVAAEYGVDPRKIYDY------------------  139 (433)
T ss_dssp             CCCEEEEEECC-SHHHHHTHHHHTTTCS-SEEEEEEE-CSCHHHHHHHHHHTTCCGGGEECS------------------
T ss_pred             CCceEEEEECC-cHHHHHHHHHHHhhCC-CcEEEEEE-cCCHHHHHHHHHHhCCCccccccc------------------
Confidence            34569999998 99997 7888888765 59999876 456777777677765321  1110                  


Q ss_pred             ceEEecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeeccccee--ecccchhHHhhhcCCeEeec----
Q 017567          151 PEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLI--AGGPFVLPLAHKHNIKILPA----  224 (369)
Q Consensus       151 ~~v~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV--~aG~li~~~a~k~~~~IlPV----  224 (369)
                             ..+.++++.+++|.|+.+..-..-..-+.+|+++||.|.+ -|=.-.  .-..-+.++++++|+.+.--    
T Consensus       140 -------~~~~~ll~~~~vD~V~iatp~~~h~~~~~~al~aGk~Vl~-EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~R  211 (433)
T 1h6d_A          140 -------SNFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHVMC-EKPMATSVADCQRMIDAAKAANKKLMIGYRCH  211 (433)
T ss_dssp             -------SSGGGGGGCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEE-CSSCCSSHHHHHHHHHHHHHHTCCEEECCGGG
T ss_pred             -------CCHHHHhcCCCCCEEEEcCCchhHHHHHHHHHHCCCcEEE-cCCCCCCHHHHHHHHHHHHHhCCeEEEEechh
Confidence                   1234566667899999999888888889999999998765 452211  23345678888888877532    


Q ss_pred             -ccchhhHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCC-CCCCCccceehhhhcchhHHHhh-hh
Q 017567          225 -DSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPN-WSMGKKITVDSATLFNKGLEVIE-AH  301 (369)
Q Consensus       225 -DSEHsAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~-W~MG~KITIDSATmmNKgLEvIE-A~  301 (369)
                       +..+..+-++|+...-.+|..+-..-+- +.+...        +      .+ |..-+.. -..+.|++-|--.|. ++
T Consensus       212 ~~p~~~~~k~~i~~G~iG~i~~v~~~~~~-~~~~~~--------~------~~~wr~~~~~-~gGG~l~d~g~H~lD~~~  275 (433)
T 1h6d_A          212 YDPMNRAAVKLIRENQLGKLGMVTTDNSD-VMDQND--------P------AQQWRLRREL-AGGGSLMDIGIYGLNGTR  275 (433)
T ss_dssp             GCHHHHHHHHHHHTTSSCSEEEEEEEEEC-CCCTTS--------H------HHHGGGCHHH-HSSSHHHHTHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHcCCCCCcEEEEEEEec-ccccCC--------C------Cccccccccc-CCCCceecccchHHHHHH
Confidence             4555666677765555567665554321 221111        1      12 6421111 023557777766666 58


Q ss_pred             hhcCCCCCceeEEEc-C---------CcceeeeEEeccCcE
Q 017567          302 YLFGAEYDNIEIIIH-P---------QSIIHSMVETQDSSV  332 (369)
Q Consensus       302 ~LF~i~~d~IevvIH-P---------qSiIHsmVef~DGSv  332 (369)
                      ||||-+++++...+. +         +-..+.+++|.||.+
T Consensus       276 ~l~G~~p~~V~a~~~~~~~~~~~~~veD~~~~~l~f~~G~~  316 (433)
T 1h6d_A          276 YLLGEEPIEVRAYTYSDPNDERFVEVEDRIIWQMRFRSGAL  316 (433)
T ss_dssp             HHHTSCEEEEEEEEECCTTCGGGSSSCSEEEEEEEETTSCE
T ss_pred             HHcCCCCEEEEEEecccCCCccccccCceEEEEEEECCCCE
Confidence            999987777777621 1         124778889998864

>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}

Probab=97.70  E-value=0.00078  Score=64.27  Aligned_cols=206  Identities=17%  Similarity=0.216  Sum_probs=127.2

Q ss_pred             CCeeEEEEecCChHhHH-HHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceE
Q 017567           75 GPKPISVLGSTGSIGTQ-TLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI  153 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtq-TLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v  153 (369)
                      .+.||+|+|+ |.||.. -+..++++|+ ++|+|++-.+ .+++   +++|.                        .+.+
T Consensus         4 ~~~rvgiiG~-G~~g~~~~~~~l~~~~~-~~l~av~d~~-~~~~---~~~~~------------------------~~~~   53 (362)
T 3fhl_A            4 EIIKTGLAAF-GMSGQVFHAPFISTNPH-FELYKIVERS-KELS---KERYP------------------------QASI   53 (362)
T ss_dssp             CCEEEEESCC-SHHHHHTTHHHHHHCTT-EEEEEEECSS-CCGG---GTTCT------------------------TSEE
T ss_pred             CceEEEEECC-CHHHHHHHHHHHhhCCC-eEEEEEEcCC-HHHH---HHhCC------------------------CCce
Confidence            3568999997 999996 7888888865 9999987543 2221   12221                        1222


Q ss_pred             EecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccc--eeecccchhHHhhhcCCeEee-----ccc
Q 017567          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKET--LIAGGPFVLPLAHKHNIKILP-----ADS  226 (369)
Q Consensus       154 ~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEs--LV~aG~li~~~a~k~~~~IlP-----VDS  226 (369)
                      +   ..+.++++.+++|.|+.+..-..-..-+.+|+++||.|.+- |=.  =+.-..-+.++|+++|..+.-     -+.
T Consensus        54 ~---~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~E-KP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p  129 (362)
T 3fhl_A           54 V---RSFKELTEDPEIDLIVVNTPDNTHYEYAGMALEAGKNVVVE-KPFTSTTKQGEELIALAKKKGLMLSVYQNRRWDA  129 (362)
T ss_dssp             E---SCSHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEE-SSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGSH
T ss_pred             E---CCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCeEEEe-cCCCCCHHHHHHHHHHHHHcCCEEEEEecceeCH
Confidence            2   23456777788999999999888888999999999987651 211  011234567788888876653     233


Q ss_pred             chhhHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhh-hhhhcC
Q 017567          227 EHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFG  305 (369)
Q Consensus       227 EHsAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIE-A~~LF~  305 (369)
                      .+..+-++++...-.+|..+-.+-+  -++..             ....+|..-+.  -..+.|++-|.-.|. ++||||
T Consensus       130 ~~~~~k~~i~~G~iG~i~~v~~~~~--~~~~~-------------~~~~~w~~~~~--~ggG~l~d~g~H~id~~~~l~G  192 (362)
T 3fhl_A          130 DFLTVRDILAKSLLGRLVEYESTFA--RYRNF-------------IKPNTWKETGE--SGGGLTYNLGSHLIDQAIQLFG  192 (362)
T ss_dssp             HHHHHHHHHHTTTTSSEEEEEEEEE--CBCCC-----------------------------CHHHHTHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHcCCCCCeEEEEEEec--ccCCC-------------CCccccccCCC--CCCceeeeehhhHHHHHHHHhC
Confidence            4455555665544456665544321  11111             01123764332  346788888877666 579999


Q ss_pred             CCCCceeEEEcC-------CcceeeeEEecc---CcE
Q 017567          306 AEYDNIEIIIHP-------QSIIHSMVETQD---SSV  332 (369)
Q Consensus       306 i~~d~IevvIHP-------qSiIHsmVef~D---GSv  332 (369)
                       +++.+......       +-.++.+++|.|   |.+
T Consensus       193 -~~~~V~a~~~~~~~~~~~~d~~~~~l~~~~~~~G~~  228 (362)
T 3fhl_A          193 -MPEAVFADLGILREGGKVDDYFIIHLLHPSLAPNVK  228 (362)
T ss_dssp             -CEEEEEEEEECCSTTCCSCCEEEEEEEEETTSTTSE
T ss_pred             -CCcEEEEEEEEeCCCCCcceEEEEEEEECCCCCCeE
Confidence             78888877642       446788999998   754

>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}

Probab=97.66  E-value=0.001  Score=62.89  Aligned_cols=208  Identities=17%  Similarity=0.221  Sum_probs=128.9

Q ss_pred             CeeEEEEecCChHhHH-HHH-HHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceE
Q 017567           76 PKPISVLGSTGSIGTQ-TLD-IVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI  153 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtq-TLd-VI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v  153 (369)
                      +.||+|+|. |.||.. .+. ++.++ +.++|+|+.-.+ -+.. +...++.                        ++.+
T Consensus         2 ~~rvgiiG~-G~~g~~~~~~~~~~~~-~~~~l~av~d~~-~~~~-~~~~~~~------------------------~~~~   53 (345)
T 3f4l_A            2 VINCAFIGF-GKSTTRYHLPYVLNRK-DSWHVAHIFRRH-AKPE-EQAPIYS------------------------HIHF   53 (345)
T ss_dssp             CEEEEEECC-SHHHHHHTHHHHTTCT-TTEEEEEEECSS-CCGG-GGSGGGT------------------------TCEE
T ss_pred             ceEEEEEec-CHHHHHHHHHHHHhcC-CCeEEEEEEcCC-HhHH-HHHHhcC------------------------CCce
Confidence            358999997 999985 677 55554 469999987643 2222 2222221                        1122


Q ss_pred             EecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccc--eeecccchhHHhhhcCCeEee-----ccc
Q 017567          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKET--LIAGGPFVLPLAHKHNIKILP-----ADS  226 (369)
Q Consensus       154 ~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEs--LV~aG~li~~~a~k~~~~IlP-----VDS  226 (369)
                      +   ..+.++++.+++|.|+.+..-..-...+.+|+++||.|.+- |=.  =+.-..-+.++++++|..+.-     -+.
T Consensus        54 ~---~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~E-KP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p  129 (345)
T 3f4l_A           54 T---SDLDEVLNDPDVKLVVVCTHADSHFEYAKRALEAGKNVLVE-KPFTPTLAQAKELFALAKSKGLTVTPYQNRRFDS  129 (345)
T ss_dssp             E---SCTHHHHTCTTEEEEEECSCGGGHHHHHHHHHHTTCEEEEC-SSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGCH
T ss_pred             E---CCHHHHhcCCCCCEEEEcCChHHHHHHHHHHHHcCCcEEEe-CCCCCCHHHHHHHHHHHHHcCCeEEEEechhcCH
Confidence            2   23456677778999999998888888999999999998763 411  222344567888888887653     233


Q ss_pred             chhhHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhh-hhhhcC
Q 017567          227 EHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFG  305 (369)
Q Consensus       227 EHsAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIE-A~~LF~  305 (369)
                      .+..+-++++...-.+|..+  ++.-+-++                  |.|..-++ .-..+.|++-|.-.|. ++||||
T Consensus       130 ~~~~~~~~i~~g~iG~i~~~--~~~~~~~~------------------~~~~~~~~-~~~gG~l~d~g~H~id~~~~l~G  188 (345)
T 3f4l_A          130 CFLTAKKAIESGKLGEIVEV--ESHFDYYR------------------PVAETKPG-LPQDGAFYGLGVHTMDQIISLFG  188 (345)
T ss_dssp             HHHHHHHHHHHSTTCSEEEE--EEECCCBC------------------CCCCCCCC-CGGGSHHHHTHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHhcCCCCCeEEE--EEEeeccC------------------CccccCCC-CCCCchhheehHHHHHHHHHHhC
Confidence            33445555554333455443  33322222                  22211111 2235678888877776 589999


Q ss_pred             CCCCceeEEEcC-------CcceeeeEEeccCcEEEecC
Q 017567          306 AEYDNIEIIIHP-------QSIIHSMVETQDSSVIGQLG  337 (369)
Q Consensus       306 i~~d~IevvIHP-------qSiIHsmVef~DGSv~Aql~  337 (369)
                       +++.+......       +-..+.+++|.||.+....+
T Consensus       189 -~~~~v~a~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~s  226 (345)
T 3f4l_A          189 -RPDHVAYDIRSLRNKANPDDTFEAQLFYGDLKAIVKTS  226 (345)
T ss_dssp             -SCSEEEEEEECCSCTTSSCCEEEEEEEETTEEEEEEEC
T ss_pred             -CCeEEEEEEEEecCCCCcceEEEEEEEECCEEEEEEEE
Confidence             56777765432       34678899999987665555

>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*

Probab=97.58  E-value=0.0011  Score=65.26  Aligned_cols=149  Identities=13%  Similarity=0.125  Sum_probs=101.5

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh---hCCCEEEEcCchhHHHHHHHHhcCCCCc
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR---FKPQVVAVRNESLLDEIKEALANVEEKP  151 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~---FkP~~V~v~de~~~~~l~~~l~~~~~~~  151 (369)
                      .+.||+|+| +|.||+.-+..++++| .++|+|++ ..|-+++.+.+++   +...                      .+
T Consensus        19 ~~~rvgiIG-~G~~g~~h~~~l~~~~-~~~lvav~-d~~~~~~~~~a~~~~~~g~~----------------------~~   73 (444)
T 2ixa_A           19 KKVRIAFIA-VGLRGQTHVENMARRD-DVEIVAFA-DPDPYMVGRAQEILKKNGKK----------------------PA   73 (444)
T ss_dssp             CCEEEEEEC-CSHHHHHHHHHHHTCT-TEEEEEEE-CSCHHHHHHHHHHHHHTTCC----------------------CC
T ss_pred             CCceEEEEe-cCHHHHHHHHHHHhCC-CcEEEEEE-eCCHHHHHHHHHHHHhcCCC----------------------CC
Confidence            456999999 6999999999998875 49999976 4566665554442   2210                      01


Q ss_pred             eEEe-cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccce--eecccchhHHhhhcCCeEeec----
Q 017567          152 EILA-GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILPA----  224 (369)
Q Consensus       152 ~v~~-G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsL--V~aG~li~~~a~k~~~~IlPV----  224 (369)
                      +++. |++.+.++++.+++|.|+.+..-..-..-+++|+++||.|.+- |=.-  +.-..-+.++|+++|..+.-.    
T Consensus        74 ~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~h~~~~~~al~aGkhV~~E-KP~a~~~~ea~~l~~~a~~~g~~~~v~~~~r  152 (444)
T 2ixa_A           74 KVFGNGNDDYKNMLKDKNIDAVFVSSPWEWHHEHGVAAMKAGKIVGME-VSGAITLEECWDYVKVSEQTGVPLMALENVC  152 (444)
T ss_dssp             EEECSSTTTHHHHTTCTTCCEEEECCCGGGHHHHHHHHHHTTCEEEEC-CCCCSSHHHHHHHHHHHHHHCCCEEECCGGG
T ss_pred             ceeccCCCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCeEEEe-CCCcCCHHHHHHHHHHHHHhCCeEEEEeccc
Confidence            2222 3445677887788999999998888888899999999988763 4211  223455678888888876642    


Q ss_pred             -ccchhhHHHhhcCCCCCccceEEEe
Q 017567          225 -DSEHSAIFQCIQGLPEGALRRIILT  249 (369)
Q Consensus       225 -DSEHsAIfQ~L~g~~~~~v~kiiLT  249 (369)
                       +..+..+-++++...-.+|..+-.+
T Consensus       153 ~~p~~~~~~~~i~~G~iG~i~~v~~~  178 (444)
T 2ixa_A          153 YRRDVMAILNMVRKGMFGELVHGTGG  178 (444)
T ss_dssp             GCHHHHHHHHHHHTTTTCSEEEEEEC
T ss_pred             cCHHHHHHHHHHHcCCCCCeEEEEEE
Confidence             3445566666665455566655544

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=97.57  E-value=0.00056  Score=67.15  Aligned_cols=189  Identities=13%  Similarity=0.164  Sum_probs=109.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCC----CEE-EEcCchhHHHHHHHHhcCCCC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKP----QVV-AVRNESLLDEIKEALANVEEK  150 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP----~~V-~v~de~~~~~l~~~l~~~~~~  150 (369)
                      |+||+|+|+ |.||+...+-+.++++-|..+.+ +.+|.+++.+.+.++..    +.- ...|-.+.+.++         
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v-~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~---------   69 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITL-ASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELV---------   69 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEE-EESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHH---------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEE-EECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHH---------
Confidence            468999999 99999999999998876433443 35678888777776642    222 223333333333         


Q ss_pred             ceEEecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCcee-eecccceee----cc--cchhHHhhhcCCeEee
Q 017567          151 PEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA-LANKETLIA----GG--PFVLPLAHKHNIKILP  223 (369)
Q Consensus       151 ~~v~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~ia-LANKEsLV~----aG--~li~~~a~k~~~~IlP  223 (369)
                                 ++++..++|+||++..-+....-..+++++|+.+. +++=+..-.    ..  .-+.+.|++.|+.+++
T Consensus        70 -----------~~l~~~~~DvVin~ag~~~~~~v~~a~l~~g~~vvD~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~  138 (405)
T 4ina_A           70 -----------ALINEVKPQIVLNIALPYQDLTIMEACLRTGVPYLDTANYEHPDLAKFEYKEQWAFHDRYKEKGVMALL  138 (405)
T ss_dssp             -----------HHHHHHCCSEEEECSCGGGHHHHHHHHHHHTCCEEESSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEE
T ss_pred             -----------HHHHhhCCCEEEECCCcccChHHHHHHHHhCCCEEEecCCCCcccchhhhHHHHHHHHHHHHhCCEEEE
Confidence                       33333268999998655555555678899999876 666433210    11  2467888899998887


Q ss_pred             ---cccchhhHHHhhc-CCCCCccceEEEe-ecCCCCCCCChhhhccCCHH---HhhcCC--CCCCCCccceehhh
Q 017567          224 ---ADSEHSAIFQCIQ-GLPEGALRRIILT-ASGGAFRDWPVEKLKEVKVA---DALKHP--NWSMGKKITVDSAT  289 (369)
Q Consensus       224 ---VDSEHsAIfQ~L~-g~~~~~v~kiiLT-ASGGPFr~~~~e~l~~vT~~---dALkHP--~W~MG~KITIDSAT  289 (369)
                         .|.=-+.++-... ++--.+++.|.+. .+||+ +.++..  .+.+|+   ..+..|  .|.-|+.+.+...+
T Consensus       139 g~G~~PG~~~l~a~~~~~~~~~~i~~i~i~~~~gg~-~g~~~~--~~~sp~~~~~~~~~~~~~~~~G~~~~~~~~~  211 (405)
T 4ina_A          139 GSGFDPGVTNVFCAYAQKHYFDEIHEIDILDCNAGD-HGYPFA--TNFNPEINLREVSSKGRYWENGEWIETEPME  211 (405)
T ss_dssp             CCBTTTBHHHHHHHHHHHHTCSEEEEEEEEEEECCB-CSSSSC--CSSCHHHHHHHTTSCEEEEETTEEEEESTTC
T ss_pred             cCCCCccHHHHHHHHHHHhccCcccEEEEEEecCCC-CCccce--eeeCHHHHHHHhcCCcEEEECCEEEEecCCc
Confidence               5554444443221 1112457766664 34554 222210  012222   234444  46677766665443

>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*

Probab=97.57  E-value=0.00011  Score=71.92  Aligned_cols=149  Identities=20%  Similarity=0.212  Sum_probs=94.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCC--CceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHE--DKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI  153 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~p--d~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v  153 (369)
                      +.||+|+| +|.||+..++.+++++  .+++|++++..+.        +.|..++-.+.   .+..+.+.+.+. .+  .
T Consensus         4 ~i~vgIiG-~G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~--------~~~~~~~~gi~---~~~~~~e~l~~~-~~--~   68 (358)
T 1ebf_A            4 VVNVAVIG-AGVVGSAFLDQLLAMKSTITYNLVLLAEAER--------SLISKDFSPLN---VGSDWKAALAAS-TT--K   68 (358)
T ss_dssp             EEEEEEEC-CSHHHHHHHHHHHHCCCSSEEEEEEEECSSB--------EEECSSCSCCS---CTTCHHHHHHTC-CC--B
T ss_pred             eEEEEEEe-cCHHHHHHHHHHHhcCCCCCEEEEEEEECCh--------hhhccccCCCC---ccccHHHHHhcc-cC--C
Confidence            45899999 5999999999999986  3699999886321        12322210000   112233434321 00  1


Q ss_pred             EecHHHHHHH-hcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeeccccee---ecccchhHHhhhcCCeEe-------
Q 017567          154 LAGEQGVIEA-ARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLI---AGGPFVLPLAHKHNIKIL-------  222 (369)
Q Consensus       154 ~~G~~gl~~~-~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV---~aG~li~~~a~k~~~~Il-------  222 (369)
                      ...-+.+.+. ......|+||.++.+..-..-..+|+++||.|..|||+-+.   .-++-+. +|+++|+.++       
T Consensus        69 ~~did~v~e~~~~~~~~DvVV~~t~~~~~a~~~~~AL~aGkhVVtaNkkpla~~~~~~~eL~-~A~~~gv~~~~Ea~vg~  147 (358)
T 1ebf_A           69 TLPLDDLIAHLKTSPKPVILVDNTSSAYIAGFYTKFVENGISIATPNKKAFSSDLATWKALF-SNKPTNGFVYHEATVGA  147 (358)
T ss_dssp             CCCHHHHHHHHTTCSSCEEEEECSCCHHHHTTHHHHHHTTCEEECCCCGGGSSCHHHHHHHT-CCCTTCCCEECGGGTTT
T ss_pred             CCCHHHHHHHhhhccCCcEEEEcCCChHHHHHHHHHHHCCCeEEecCcccccCCHHHHHHHH-HHHHcCCEEEEcccccc
Confidence            1112333443 23345699999988764333346899999999999999887   5567777 9999998875       


Q ss_pred             --ecccchhhHHHhh-cCCCCCccceE
Q 017567          223 --PADSEHSAIFQCI-QGLPEGALRRI  246 (369)
Q Consensus       223 --PVDSEHsAIfQ~L-~g~~~~~v~ki  246 (369)
                        |+   ...+-++| .|.   +|.+|
T Consensus       148 giPi---i~~l~~~l~~G~---~I~~I  168 (358)
T 1ebf_A          148 GLPI---ISFLREIIQTGD---EVEKI  168 (358)
T ss_dssp             TSSC---HHHHHHHHHHTC---CEEEE
T ss_pred             CCcH---HHHHHHHHHcCC---CeEEE
Confidence              63   66777777 454   45554

>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}

Probab=97.53  E-value=0.00058  Score=64.24  Aligned_cols=211  Identities=14%  Similarity=0.122  Sum_probs=129.8

Q ss_pred             CCeeEEEEecCChHhHH-HHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceE
Q 017567           75 GPKPISVLGSTGSIGTQ-TLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI  153 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtq-TLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v  153 (369)
                      .|.||+|+|+ |.||+. .+..+++.|+ ++|+|++ ..|.++..+.+++|.-..+.                       
T Consensus        22 ~mirigiIG~-G~ig~~~~~~~~~~~~~-~~lvav~-d~~~~~a~~~a~~~g~~~~y-----------------------   75 (350)
T 4had_A           22 SMLRFGIIST-AKIGRDNVVPAIQDAEN-CVVTAIA-SRDLTRAREMADRFSVPHAF-----------------------   75 (350)
T ss_dssp             CCEEEEEESC-CHHHHHTHHHHHHHCSS-EEEEEEE-CSSHHHHHHHHHHHTCSEEE-----------------------
T ss_pred             CccEEEEEcC-hHHHHHHHHHHHHhCCC-eEEEEEE-CCCHHHHHHHHHHcCCCeee-----------------------
Confidence            4569999995 999976 5888988765 9999976 56888888888888743322                       


Q ss_pred             EecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccce--eecccchhHHhhhcCCeEee-----ccc
Q 017567          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILP-----ADS  226 (369)
Q Consensus       154 ~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsL--V~aG~li~~~a~k~~~~IlP-----VDS  226 (369)
                          ..+.+|++.+++|.|+.+..=..=...+.+|+++||.|.+ =|=.-  +.-..-+.++|+++|..+..     -+.
T Consensus        76 ----~d~~ell~~~~iDaV~I~tP~~~H~~~~~~al~aGkhVl~-EKPla~~~~ea~~l~~~a~~~~~~l~v~~~~R~~p  150 (350)
T 4had_A           76 ----GSYEEMLASDVIDAVYIPLPTSQHIEWSIKAADAGKHVVC-EKPLALKAGDIDAVIAARDRNKVVVTEAYMITYSP  150 (350)
T ss_dssp             ----SSHHHHHHCSSCSEEEECSCGGGHHHHHHHHHHTTCEEEE-CSCCCSSGGGGHHHHHHHHHHTCCEEECCGGGGSH
T ss_pred             ----CCHHHHhcCCCCCEEEEeCCCchhHHHHHHHHhcCCEEEE-eCCcccchhhHHHHHHHHHHcCCceeEeeeeecCH
Confidence                1234566677899999998888888889999999998764 11110  12345567888888876643     244


Q ss_pred             chhhHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhh-hhhhcC
Q 017567          227 EHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFG  305 (369)
Q Consensus       227 EHsAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIE-A~~LF~  305 (369)
                      .+..+-++|+...-.+|..+-..-  +-++ .+              .++|..-++  ...+.|++-|-=.|- ++||||
T Consensus       151 ~~~~~k~~i~~G~iG~i~~i~~~~--~~~~-~~--------------~~~~~~~~~--~gGG~l~d~g~H~id~~~~l~G  211 (350)
T 4had_A          151 VWQKVRSLIDEGAIGSLRHVQGAF--TYFN-RD--------------ASNMRNIPE--LGGGGLPDIGVYPVMSTRFSTG  211 (350)
T ss_dssp             HHHHHHHHHHTTTTSSEEEEEEEE--EEEC-CC--------------C--------------CCHHHHHHHHHHHHHHHC
T ss_pred             HHHHhhHhhhcCCCCcceeeeEEE--eecc-cc--------------cccccCChh--hcCCcccCCceehhHHHHHHcC
Confidence            555666666654444555443221  1111 00              012221111  123456666544443 578999


Q ss_pred             CCCCceeEEE--cCCc----ceeeeEEeccCcEEEe
Q 017567          306 AEYDNIEIII--HPQS----IIHSMVETQDSSVIGQ  335 (369)
Q Consensus       306 i~~d~IevvI--HPqS----iIHsmVef~DGSv~Aq  335 (369)
                      -++.++....  +|+.    ..+.+++|.||.+-..
T Consensus       212 ~~~~~V~a~~~~~~~~~~d~~~~~~l~~~~g~~~~~  247 (350)
T 4had_A          212 KEPLRIQANTERDPDFGTDIYSSVKADFDDFELSFY  247 (350)
T ss_dssp             CCCSEEEEEEEECTTTCCEEEEEEEEECSSCEEEEE
T ss_pred             CCceEEEEEEEEcCCCCceEEEEEEEEECCEEEEEE
Confidence            7777776543  3332    3456778888866433

>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A

Probab=97.51  E-value=0.0018  Score=61.44  Aligned_cols=213  Identities=12%  Similarity=0.105  Sum_probs=127.5

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEE
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      .+.||+|+|+ |.||..-+..+.++| .+++++++. .|.++..+.+++|.-..                     ...++
T Consensus         5 ~~~~vgiiG~-G~ig~~~~~~l~~~~-~~~lv~v~d-~~~~~~~~~a~~~~~~~---------------------~~~~~   60 (362)
T 1ydw_A            5 TQIRIGVMGC-ADIARKVSRAIHLAP-NATISGVAS-RSLEKAKAFATANNYPE---------------------STKIH   60 (362)
T ss_dssp             -CEEEEEESC-CTTHHHHHHHHHHCT-TEEEEEEEC-SSHHHHHHHHHHTTCCT---------------------TCEEE
T ss_pred             CceEEEEECc-hHHHHHHHHHHhhCC-CcEEEEEEc-CCHHHHHHHHHHhCCCC---------------------CCeee
Confidence            3568999997 999999999888876 499998764 57777777777765200                     01111


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccce--eecccchhHHhhhcCCeEeec-----ccc
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILPA-----DSE  227 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsL--V~aG~li~~~a~k~~~~IlPV-----DSE  227 (369)
                         ..+.++++.+++|.|+.+..-..-..-+.+|+++||.|.+ .|=.-  +.-..-+.++|+++|..+.--     +..
T Consensus        61 ---~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~V~~-EKP~a~~~~e~~~l~~~a~~~g~~~~~~~~~r~~p~  136 (362)
T 1ydw_A           61 ---GSYESLLEDPEIDALYVPLPTSLHVEWAIKAAEKGKHILL-EKPVAMNVTEFDKIVDACEANGVQIMDGTMWVHNPR  136 (362)
T ss_dssp             ---SSHHHHHHCTTCCEEEECCCGGGHHHHHHHHHTTTCEEEE-CSSCSSSHHHHHHHHHHHHTTTCCEEECCCGGGSGG
T ss_pred             ---CCHHHHhcCCCCCEEEEcCChHHHHHHHHHHHHCCCeEEE-ecCCcCCHHHHHHHHHHHHHcCCEEEEEEeeccCHH
Confidence               1234566667899999999888888889999999998775 56321  223456778888988877521     222


Q ss_pred             hhhHHHhhcCC-CCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCcccee-hhhhcchhHHHhh-hhhhc
Q 017567          228 HSAIFQCIQGL-PEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVD-SATLFNKGLEVIE-AHYLF  304 (369)
Q Consensus       228 HsAIfQ~L~g~-~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITID-SATmmNKgLEvIE-A~~LF  304 (369)
                      +..+-+.|+.. .-.+|..+-.+-+   ++ .+.+ .        .. .+|..-+.  .+ .+.|++-|.=.|. ++|||
T Consensus       137 ~~~~~~~i~~g~~iG~i~~v~~~~~---~~-~~~~-~--------~~-~~wr~~~~--~~ggG~l~d~g~H~id~~~~l~  200 (362)
T 1ydw_A          137 TALLKEFLSDSERFGQLKTVQSCFS---FA-GDED-F--------LK-NDIRVKPG--LDGLGALGDAGWYAIRATLLAN  200 (362)
T ss_dssp             GTTTTTGGGCTTTTCSEEEEEEEEE---EE-CCHH-H--------HH-HCGGGCTT--SSTTHHHHHTHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhcCCccceEEEEEEEE---ec-CCcc-c--------cc-CCcccCcc--cCCCceeecccHHHHHHHHHhc
Confidence            33344444322 2345655544322   10 1110 0        00 12332211  12 3567777666664 47888


Q ss_pred             CC-CCCceeEEEc----CC---cceeeeEEeccCc
Q 017567          305 GA-EYDNIEIIIH----PQ---SIIHSMVETQDSS  331 (369)
Q Consensus       305 ~i-~~d~IevvIH----Pq---SiIHsmVef~DGS  331 (369)
                      |. .++++.....    +.   -..+.+++|.||.
T Consensus       201 g~~~p~~V~a~~~~~~~~~~~~d~~~~~l~~~~G~  235 (362)
T 1ydw_A          201 NFELPKTVTAFPGAVLNEAGVILSCGASLSWEDGR  235 (362)
T ss_dssp             TTCCCSEEEECSCCEECTTSCEEEEEEEEECSSSC
T ss_pred             CCCCCeEEEEeccccccCCCCceEEEEEEEECCCC
Confidence            85 3566655421    11   1355778888885

>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}

Probab=97.42  E-value=0.00061  Score=65.86  Aligned_cols=193  Identities=18%  Similarity=0.172  Sum_probs=123.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCC-------CceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHE-------DKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEE  149 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~p-------d~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~  149 (369)
                      -||+|+| +|.||+.-+..+++.|       ++++|+|++ ..|-+++.+.+++|.-..+.                   
T Consensus        27 lrvgiIG-~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~-d~~~~~a~~~a~~~~~~~~y-------------------   85 (412)
T 4gqa_A           27 LNIGLIG-SGFMGQAHADAYRRAAMFYPDLPKRPHLYALA-DQDQAMAERHAAKLGAEKAY-------------------   85 (412)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEE-CSSHHHHHHHHHHHTCSEEE-------------------
T ss_pred             ceEEEEc-CcHHHHHHHHHHHhccccccccCCCeEEEEEE-cCCHHHHHHHHHHcCCCeEE-------------------
Confidence            4999999 5999999888888754       688999976 56788888888888643321                   


Q ss_pred             CceEEecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccce--eecccchhHHhhhcCCeEee-c--
Q 017567          150 KPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILP-A--  224 (369)
Q Consensus       150 ~~~v~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsL--V~aG~li~~~a~k~~~~IlP-V--  224 (369)
                              ..+.++++.+++|.|+.+..-..=...+++|+++||.|.+ =|=.-  +.-..-+.++|+++|..+.- -  
T Consensus        86 --------~d~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~-EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~  156 (412)
T 4gqa_A           86 --------GDWRELVNDPQVDVVDITSPNHLHYTMAMAAIAAGKHVYC-EKPLAVNEQQAQEMAQAARRAGVKTMVAFNN  156 (412)
T ss_dssp             --------SSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEE-ESCSCSSHHHHHHHHHHHHHHTCCEEEECGG
T ss_pred             --------CCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHcCCCeEe-ecCCcCCHHHHHHHHHHHHHhCCeeeeccce
Confidence                    1234566677899999999888888999999999998764 11110  12244566788888876553 2  


Q ss_pred             --ccchhhHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhh-hh
Q 017567          225 --DSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AH  301 (369)
Q Consensus       225 --DSEHsAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIE-A~  301 (369)
                        +..+..+-+.++...-.+|..+-.+-+.+.+++.             -...+|..-+... -++.|++.|-=.|- ++
T Consensus       157 R~~p~~~~~k~~i~~G~iG~i~~~~~~~~~~~~~~~-------------~~~~~wr~~~~~~-GgG~l~d~g~H~iD~~~  222 (412)
T 4gqa_A          157 IKTPAALLAKQIIARGDIGEPVRFRGTFDQGFYNDP-------------NLPWSWRCSKTLG-GSGALGDLGAHTLSVAQ  222 (412)
T ss_dssp             GTSHHHHHHHHHHHHTTTCSEEEEEEEEECCSTTST-------------TSCCCGGGCTTTT-CCSHHHHTHHHHHHHHH
T ss_pred             ecCHHHHHHHHHHhcCCcCCeEEEEEEeccccccCC-------------CCCccceeccccC-CCcchhhhhhhHHHHHH
Confidence              3333344455554444566666655544433321             1123564322211 14567887755553 57


Q ss_pred             hhcCCCCCceeEE
Q 017567          302 YLFGAEYDNIEII  314 (369)
Q Consensus       302 ~LF~i~~d~Ievv  314 (369)
                      |||| +++.+.+.
T Consensus       223 ~l~G-~~~~V~a~  234 (412)
T 4gqa_A          223 FLLG-GIREVTAS  234 (412)
T ss_dssp             HHHC-CEEEEEEE
T ss_pred             HHhC-CCeEEEEE
Confidence            9998 44555443

>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}

Probab=97.40  E-value=0.00046  Score=64.76  Aligned_cols=185  Identities=19%  Similarity=0.201  Sum_probs=114.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhC------CCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEH------EDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEE  149 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~------pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~  149 (369)
                      |-||+|+| +|+||+.=+..+++.      .++++|+|++- .|.+++.+.+++|.-..+.                   
T Consensus        25 kirvgiIG-~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d-~~~~~a~~~a~~~g~~~~y-------------------   83 (393)
T 4fb5_A           25 PLGIGLIG-TGYMGKCHALAWNAVKTVFGDVERPRLVHLAE-ANAGLAEARAGEFGFEKAT-------------------   83 (393)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHTTHHHHHCSSCCCEEEEEEC-C--TTHHHHHHHHTCSEEE-------------------
T ss_pred             CccEEEEc-CCHHHHHHHHHHHhhhhhhccCCCcEEEEEEC-CCHHHHHHHHHHhCCCeec-------------------
Confidence            44899999 699998655544443      36789999774 5667777777887643321                   


Q ss_pred             CceEEecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccce--eecccchhHHhhhcCCeEee----
Q 017567          150 KPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILP----  223 (369)
Q Consensus       150 ~~~v~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsL--V~aG~li~~~a~k~~~~IlP----  223 (369)
                              ..+.++++.+++|.|+.+..=..=...+.+|+++||.|.+ =|=.-  +.-..-+.++|+++|..+.-    
T Consensus        84 --------~d~~ell~~~~iDaV~IatP~~~H~~~a~~al~aGkhVl~-EKPla~~~~ea~~l~~~a~~~g~~l~vg~~~  154 (393)
T 4fb5_A           84 --------ADWRALIADPEVDVVSVTTPNQFHAEMAIAALEAGKHVWC-EKPMAPAYADAERMLATAERSGKVAALGYNY  154 (393)
T ss_dssp             --------SCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEE-CSCSCSSHHHHHHHHHHHHHSSSCEEECCGG
T ss_pred             --------CCHHHHhcCCCCcEEEECCChHHHHHHHHHHHhcCCeEEE-ccCCcccHHHHHHhhhhHHhcCCcccccccc
Confidence                    1234566677899999999988889999999999998754 12111  11245567888888876543    


Q ss_pred             -cccchhhHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhh-hh
Q 017567          224 -ADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AH  301 (369)
Q Consensus       224 -VDSEHsAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIE-A~  301 (369)
                       -+..+..+-+.++...-.+|..+-.+-+.+ ++..+.            ....|.  .+..-..+.|++-|--.|- ++
T Consensus       155 R~~p~~~~~k~~i~~G~iG~i~~v~~~~~~~-~~~~~~------------~~~~~~--~~~~~ggG~l~d~g~H~iD~~~  219 (393)
T 4fb5_A          155 IQNPVMRHIRKLVGDGVIGRVNHVRVEMDED-FMADPD------------IFFYWK--SELSAGYGALDDFAVHPLSLLW  219 (393)
T ss_dssp             GGCHHHHHHHHHHHTTTTCSEEEEEEEEECC-TTTCTT------------SCCCGG--GCGGGCCBHHHHTTHHHHHHHH
T ss_pred             ccChHHHHHHHHHHcCCCccccceeeeeccc-cCCCcc------------cccccc--ccccCCCceecceeeehHHHHH
Confidence             244455566666655555666665544332 211110            011121  2223345678887755554 57


Q ss_pred             hhcC
Q 017567          302 YLFG  305 (369)
Q Consensus       302 ~LF~  305 (369)
                      ||||
T Consensus       220 ~l~G  223 (393)
T 4fb5_A          220 YLFG  223 (393)
T ss_dssp             HHTC
T ss_pred             HhcC
Confidence            8998

>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}

Probab=97.27  E-value=0.00071  Score=63.38  Aligned_cols=213  Identities=13%  Similarity=0.111  Sum_probs=128.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCC------ceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHED------KFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEE  149 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd------~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~  149 (369)
                      +-||+|+|+ |+||+.=+..+++.|+      ..+|+|++ ..|.+.+.+.+++|.-..+.                   
T Consensus         6 klrvgiIG~-G~ig~~h~~~~~~~~~~~~~~~~~~l~av~-d~~~~~a~~~a~~~g~~~~~-------------------   64 (390)
T 4h3v_A            6 NLGIGLIGY-AFMGAAHSQAWRSAPRFFDLPLHPDLNVLC-GRDAEAVRAAAGKLGWSTTE-------------------   64 (390)
T ss_dssp             EEEEEEECH-HHHHHHHHHHHHHHHHHSCCSSEEEEEEEE-CSSHHHHHHHHHHHTCSEEE-------------------
T ss_pred             cCcEEEEcC-CHHHHHHHHHHHhCccccccccCceEEEEE-cCCHHHHHHHHHHcCCCccc-------------------
Confidence            348999995 9999988888877654      45888865 56888888888888643321                   


Q ss_pred             CceEEecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeeccccee--ecccchhHH---hhhcCCeEee-
Q 017567          150 KPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLI--AGGPFVLPL---AHKHNIKILP-  223 (369)
Q Consensus       150 ~~~v~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV--~aG~li~~~---a~k~~~~IlP-  223 (369)
                              ..+.+|++.+++|.|+.+..-..=...+.+|+++||.|.+ =|=.-.  .-..-+.++   +++.|..+.- 
T Consensus        65 --------~d~~~ll~~~~iDaV~I~tP~~~H~~~~~~al~aGkhVl~-EKPla~t~~ea~~l~~~~~~~~~~g~~~~v~  135 (390)
T 4h3v_A           65 --------TDWRTLLERDDVQLVDVCTPGDSHAEIAIAALEAGKHVLC-EKPLANTVAEAEAMAAAAAKAAAGGIRSMVG  135 (390)
T ss_dssp             --------SCHHHHTTCTTCSEEEECSCGGGHHHHHHHHHHTTCEEEE-ESSSCSSHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             --------CCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHcCCCcee-ecCcccchhHHHHHHHHHHHHHhcCCceEEE
Confidence                    1235667778899999999988889999999999998764 121111  112234333   4445554432 


Q ss_pred             c----ccchhhHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhh
Q 017567          224 A----DSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE  299 (369)
Q Consensus       224 V----DSEHsAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIE  299 (369)
                      -    +..+..+-++|+...-.+|..+-..-.-+-.++.             -..++|..-+.- --.+.|++-|--.|-
T Consensus       136 ~~~R~~p~~~~~k~~i~~g~iG~i~~v~~~~~~~~~~~~-------------~~~~~wr~~~~~-~GgG~l~d~g~H~iD  201 (390)
T 4h3v_A          136 FTYRRVPAIALARKLVADGKIGTVRHVRAQYLQDWIADP-------------EAPLSWRLDKDK-AGSGALGDIGAHIVD  201 (390)
T ss_dssp             CGGGGSHHHHHHHHHHHTTSSCSEEEEEEEEECCTTCST-------------TSCCCGGGCHHH-HSCSHHHHTHHHHHH
T ss_pred             eeeccCchHHHHHHHHHcCCCCcceeeEEEEeeeccCCC-------------CCCccccccccc-cCCcchhhhHHHHHH
Confidence            1    2233444555655444556554433222111110             122456431110 013467777766664


Q ss_pred             -hhhhcCCCCCceeEEEc---------------------------CCcceeeeEEeccCcE
Q 017567          300 -AHYLFGAEYDNIEIIIH---------------------------PQSIIHSMVETQDSSV  332 (369)
Q Consensus       300 -A~~LF~i~~d~IevvIH---------------------------PqSiIHsmVef~DGSv  332 (369)
                       ++||||-++.++....+                           -+-..+.+++|.+|.+
T Consensus       202 ~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdd~~~~~~~~~~G~~  262 (390)
T 4h3v_A          202 LTQFITGDRIAEVSGRLETFVKERPKPEAHSGLSGTASAERGPVTVDDAAVFLATFRGGAL  262 (390)
T ss_dssp             HHHHHHSCCEEEEEEEEECSCCEEECTTCCCCC--CCGGGEEECCSCSEEEEEEEETTSCE
T ss_pred             HHHHHhCCCceEEEEEEEeecccCCcccccccccccccccccccccccceeeEEecCCCcE
Confidence             57899965555555432                           1235678889998875

>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}

Probab=97.21  E-value=0.0001  Score=71.65  Aligned_cols=105  Identities=24%  Similarity=0.320  Sum_probs=76.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCC-------ceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHED-------KFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEE  149 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd-------~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~  149 (369)
                      .||+|+| +|.||+..++.++++++       .++|++++..+ .++    .+.|....                     
T Consensus         4 irvgIiG-~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~-~~~----~~~~~~~~---------------------   56 (332)
T 2ejw_A            4 LKIALLG-GGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRD-PRK----PRAIPQEL---------------------   56 (332)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSC-TTS----CCSSCGGG---------------------
T ss_pred             eEEEEEc-CCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECC-HHH----hhccCccc---------------------
Confidence            5899999 59999999999999885       68999987654 221    11121000                     


Q ss_pred             CceEEecHHHHHHHhcCCCCCEEEEeccCc-cCcHHHHHHHHcCCceeeecccceeecccchhHHhhhc
Q 017567          150 KPEILAGEQGVIEAARHPDAVTVVTGIVGC-AGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKH  217 (369)
Q Consensus       150 ~~~v~~G~~gl~~~~~~~~~D~Vv~AIvG~-aGL~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~  217 (369)
                         +..   ...++.   ++|+|+.++.+. ....-+.+|+++||.|..+||.-+..-++-+.++|+++
T Consensus        57 ---~~~---d~~~ll---~iDvVve~t~~~~~a~~~~~~AL~aGKhVVtaNkkpla~~~~eL~~~A~~~  116 (332)
T 2ejw_A           57 ---LRA---EPFDLL---EADLVVEAMGGVEAPLRLVLPALEAGIPLITANKALLAEAWESLRPFAEEG  116 (332)
T ss_dssp             ---EES---SCCCCT---TCSEEEECCCCSHHHHHHHHHHHHTTCCEEECCHHHHHHSHHHHHHHHHTT
T ss_pred             ---ccC---CHHHHh---CCCEEEECCCCcHHHHHHHHHHHHcCCeEEECCchhHHHHHHHHHHHHHhC
Confidence               000   111222   699999998776 34556778999999999999998888888889999887

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.18  E-value=0.0025  Score=61.01  Aligned_cols=121  Identities=21%  Similarity=0.222  Sum_probs=78.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      ++||.|+|| |.+|+...+.+.++   ++|..  +..|.+.+.+ ++++-. .+. .|-.                    
T Consensus        16 ~mkilvlGa-G~vG~~~~~~L~~~---~~v~~--~~~~~~~~~~-~~~~~~-~~~-~d~~--------------------   66 (365)
T 3abi_A           16 HMKVLILGA-GNIGRAIAWDLKDE---FDVYI--GDVNNENLEK-VKEFAT-PLK-VDAS--------------------   66 (365)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHTTT---SEEEE--EESCHHHHHH-HTTTSE-EEE-CCTT--------------------
T ss_pred             ccEEEEECC-CHHHHHHHHHHhcC---CCeEE--EEcCHHHHHH-HhccCC-cEE-EecC--------------------
Confidence            357999999 99999988887764   56542  3456565533 333321 111 1222                    


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeecccchhHHhhhcCCeEee---cccchh
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILP---ADSEHS  229 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~~~~IlP---VDSEHs  229 (369)
                      -.+.+.++++  ++|+||+++.++.+..-..+|+++|+...=..=++  --=.-+.+.|++.|+.++|   +|.=-+
T Consensus        67 d~~~l~~~~~--~~DvVi~~~p~~~~~~v~~~~~~~g~~yvD~s~~~--~~~~~l~~~a~~~g~~~i~~~G~~PG~~  139 (365)
T 3abi_A           67 NFDKLVEVMK--EFELVIGALPGFLGFKSIKAAIKSKVDMVDVSFMP--ENPLELRDEAEKAQVTIVFDAGFAPGLS  139 (365)
T ss_dssp             CHHHHHHHHT--TCSEEEECCCGGGHHHHHHHHHHHTCEEEECCCCS--SCGGGGHHHHHHTTCEEECCCBTTTBHH
T ss_pred             CHHHHHHHHh--CCCEEEEecCCcccchHHHHHHhcCcceEeeeccc--hhhhhhhhhhccCCceeeecCCCCCchH
Confidence            1345556654  48999999999999988999999999865332111  1112356789999999998   555433

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=97.13  E-value=0.002  Score=56.00  Aligned_cols=40  Identities=13%  Similarity=0.236  Sum_probs=30.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHH-hCCCceEEEEEeecCCHH-HHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVA-EHEDKFRVVALAAGSNIT-LLAD  119 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~-~~pd~F~VvaLaag~Nv~-lL~e  119 (369)
                      +|+|.|.|+||.||..+.+-+. +.  .++|+++.  +|-+ .+.+
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~--g~~V~~~~--r~~~~~~~~   46 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYT--DMHITLYG--RQLKTRIPP   46 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHC--CCEEEEEE--SSHHHHSCH
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcC--CceEEEEe--cCccccchh
Confidence            4569999999999999999888 53  67888865  4555 5443

>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*

Probab=96.81  E-value=0.0011  Score=65.03  Aligned_cols=114  Identities=11%  Similarity=0.072  Sum_probs=78.8

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEE
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      .+.||+|+| || .|+.=++.+++.|+.|+|+|++. +|.++..+.+++|..+.  ..|                     
T Consensus         6 ~~~rv~VvG-~G-~g~~h~~a~~~~~~~~elvav~~-~~~~~a~~~a~~~gv~~--~~~---------------------   59 (372)
T 4gmf_A            6 PKQRVLIVG-AK-FGEMYLNAFMQPPEGLELVGLLA-QGSARSRELAHAFGIPL--YTS---------------------   59 (372)
T ss_dssp             -CEEEEEEC-ST-TTHHHHHTTSSCCTTEEEEEEEC-CSSHHHHHHHHHTTCCE--ESS---------------------
T ss_pred             CCCEEEEEe-hH-HHHHHHHHHHhCCCCeEEEEEEC-CCHHHHHHHHHHhCCCE--ECC---------------------
Confidence            467999999 48 59999999999999999999875 46788888888887542  121                     


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccC----ccCcHHHHHHHHcCCceeeecccceeecccchhHHhhhcCCeEe
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVG----CAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKIL  222 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG----~aGL~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~~~~Il  222 (369)
                           +.++.+  ++|.|+.++.-    -.+..-+.+|+++||.|..= |=.=+-=..-+.++|+++|+.+.
T Consensus        60 -----~~~l~~--~~D~v~i~~p~~~h~~~~~~~a~~al~aGkhVl~E-KPl~~~ea~~l~~~A~~~g~~~~  123 (372)
T 4gmf_A           60 -----PEQITG--MPDIACIVVRSTVAGGAGTQLARHFLARGVHVIQE-HPLHPDDISSLQTLAQEQGCCYW  123 (372)
T ss_dssp             -----GGGCCS--CCSEEEECCC--CTTSHHHHHHHHHHHTTCEEEEE-SCCCHHHHHHHHHHHHHHTCCEE
T ss_pred             -----HHHHhc--CCCEEEEECCCcccchhHHHHHHHHHHcCCcEEEe-cCCCHHHHHHHHHHHHHcCCEEE
Confidence                 122333  47888777643    33477899999999998642 22101123456778888887654

>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1

Probab=96.72  E-value=0.013  Score=56.24  Aligned_cols=106  Identities=19%  Similarity=0.263  Sum_probs=70.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      .||+|+|+ |.||+.-++.+.++|+ ++|++++..+ .+.+.+.++++.-+.. -.-......+.+.      ++.+ .+
T Consensus         3 irVgIiG~-G~iG~~~~r~l~~~~~-~elvav~d~~-~~~~~~~~~~~g~~~~-~~~~~~v~~~~~~------~~~v-~~   71 (334)
T 2czc_A            3 VKVGVNGY-GTIGKRVAYAVTKQDD-MELIGITKTK-PDFEAYRAKELGIPVY-AASEEFIPRFEKE------GFEV-AG   71 (334)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTCTT-EEEEEEEESS-CSHHHHHHHHTTCCEE-ESSGGGHHHHHHH------TCCC-SC
T ss_pred             cEEEEEeE-hHHHHHHHHHHhcCCC-CEEEEEEcCC-HHHHHHHHHhcCcccc-ccccccceeccCC------ceEE-cC
Confidence            58999997 9999999999999875 9999998753 5566666666642211 1111122222221      0112 12


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceee
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIAL  197 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaL  197 (369)
                        ...++..  ++|+|+.+........-..+++++||.|.+
T Consensus        72 --d~~~l~~--~vDvV~~aTp~~~h~~~a~~~l~aGk~Vi~  108 (334)
T 2czc_A           72 --TLNDLLE--KVDIIVDATPGGIGAKNKPLYEKAGVKAIF  108 (334)
T ss_dssp             --BHHHHHT--TCSEEEECCSTTHHHHHHHHHHHHTCEEEE
T ss_pred             --cHHHhcc--CCCEEEECCCccccHHHHHHHHHcCCceEe
Confidence              2445553  799999998777767778899999998774

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=96.71  E-value=0.0019  Score=57.02  Aligned_cols=35  Identities=20%  Similarity=0.414  Sum_probs=28.9

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        74 ~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      ..+|+|.|.|+||.||....+-+.+.. .++|++++
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G-~~~V~~~~   55 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQ-TIKQTLFA   55 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCT-TEEEEEEE
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCC-CceEEEEE
Confidence            457899999999999999999888753 28888876

>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5

Probab=96.63  E-value=0.0067  Score=56.46  Aligned_cols=199  Identities=12%  Similarity=0.172  Sum_probs=120.7

Q ss_pred             CeeEEEEecCChHhHH-HHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEE
Q 017567           76 PKPISVLGSTGSIGTQ-TLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtq-TLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      +.||+|+|+ |.||.. .+..+.+.|+ ++|+++.. .|.++..+.+++|..+   +.                      
T Consensus         5 ~~~vgiiG~-G~~g~~~~~~~l~~~~~-~~lvav~d-~~~~~~~~~~~~~g~~---~~----------------------   56 (319)
T 1tlt_A            5 KLRIGVVGL-GGIAQKAWLPVLAAASD-WTLQGAWS-PTRAKALPICESWRIP---YA----------------------   56 (319)
T ss_dssp             CEEEEEECC-STHHHHTHHHHHHSCSS-EEEEEEEC-SSCTTHHHHHHHHTCC---BC----------------------
T ss_pred             cceEEEECC-CHHHHHHHHHHHHhCCC-eEEEEEEC-CCHHHHHHHHHHcCCC---cc----------------------
Confidence            568999998 999996 7888887664 99998764 4445555555555432   00                      


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccce--eecccchhHHhhhcCCeEeec-ccchhhH
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILPA-DSEHSAI  231 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsL--V~aG~li~~~a~k~~~~IlPV-DSEHsAI  231 (369)
                      .   ...++  ..++|.|+.+..-..-..-+.+|+++||.|.+ .|=.-  +.-..-+.++|+++|..+..- -.-++-.
T Consensus        57 ~---~~~~l--~~~~D~V~i~tp~~~h~~~~~~al~~G~~v~~-eKP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~  130 (319)
T 1tlt_A           57 D---SLSSL--AASCDAVFVHSSTASHFDVVSTLLNAGVHVCV-DKPLAENLRDAERLVELAARKKLTLMVGFNRRFAPL  130 (319)
T ss_dssp             S---SHHHH--HTTCSEEEECSCTTHHHHHHHHHHHTTCEEEE-ESSSCSSHHHHHHHHHHHHHTTCCEEEECGGGGCHH
T ss_pred             C---cHHHh--hcCCCEEEEeCCchhHHHHHHHHHHcCCeEEE-eCCCCCCHHHHHHHHHHHHHcCCeEEEeeecccCHH
Confidence            0   11233  24699999998877777888999999998765 34211  122344677888888776542 2334444


Q ss_pred             HHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhh-hhhhcCCCCCc
Q 017567          232 FQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFGAEYDN  310 (369)
Q Consensus       232 fQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIE-A~~LF~i~~d~  310 (369)
                      ||-++.. -.++..+....+    |...             ..| |.-       ...|++-|.-.|. ++||||-+ ++
T Consensus       131 ~~~~k~~-i~~~~~i~~~~~----~~~~-------------~~p-~~~-------~g~l~d~g~H~id~~~~l~G~~-~~  183 (319)
T 1tlt_A          131 YGELKTQ-LATAASLRMDKH----RSNS-------------VGP-HDL-------YFTLLDDYLHVVDTALWLSGGK-AS  183 (319)
T ss_dssp             HHHHTTT-GGGCCEEEEEEC----CSSC-------------CCS-SCH-------HHHHHHTHHHHHHHHHHHTTTC-CC
T ss_pred             HHHHHHH-hCCCcEEEEEec----CCCc-------------cCC-CCC-------CceeecccccHHHHHHHHcCCC-eE
Confidence            5555432 123433332211    1000             001 110       1357777666555 57999987 77


Q ss_pred             eeEEEc----CCcceeeeEEeccCcEEEe
Q 017567          311 IEIIIH----PQSIIHSMVETQDSSVIGQ  335 (369)
Q Consensus       311 IevvIH----PqSiIHsmVef~DGSv~Aq  335 (369)
                      +.....    .+...+.+++|.+|...+.
T Consensus       184 V~a~~~~~~~~~d~~~~~~~~~~g~~~~~  212 (319)
T 1tlt_A          184 LDGGTLLTNDAGEMLFAEHHFSAGPLQIT  212 (319)
T ss_dssp             EEEEEEEECTTCCEEEEEEEEEETTEEEE
T ss_pred             EEEEEEecCCCCcEEEEEEEEcCCCEEEE
Confidence            776543    2456788999998874333

>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}

Probab=96.61  E-value=0.0082  Score=55.57  Aligned_cols=203  Identities=13%  Similarity=0.171  Sum_probs=119.5

Q ss_pred             CCeeEEEEecCChHhHH-HHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceE
Q 017567           75 GPKPISVLGSTGSIGTQ-TLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI  153 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtq-TLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v  153 (369)
                      .+.||+|+|+ |.||.. -+..++++|+ ++|++++ ..|-+++.+.+++|....  .                      
T Consensus         5 ~~~~igiIG~-G~~g~~~~~~~l~~~~~-~~l~av~-d~~~~~~~~~a~~~~~~~--~----------------------   57 (308)
T 3uuw_A            5 KNIKMGMIGL-GSIAQKAYLPILTKSER-FEFVGAF-TPNKVKREKICSDYRIMP--F----------------------   57 (308)
T ss_dssp             CCCEEEEECC-SHHHHHHTHHHHTSCSS-SEEEEEE-CSCHHHHHHHHHHHTCCB--C----------------------
T ss_pred             ccCcEEEEec-CHHHHHHHHHHHHhCCC-eEEEEEE-CCCHHHHHHHHHHcCCCC--c----------------------
Confidence            3568999997 999997 8888888765 9999875 457787777777775322  0                      


Q ss_pred             EecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceee--cccchhHHhhhcCCeEeec-ccchhh
Q 017567          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIA--GGPFVLPLAHKHNIKILPA-DSEHSA  230 (369)
Q Consensus       154 ~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~--aG~li~~~a~k~~~~IlPV-DSEHsA  230 (369)
                          ..+.++++  ++|.|+.+..-..-..-+.+|+++||.|.+ -|=.-..  -..-+.++++++|..+..- -.-++-
T Consensus        58 ----~~~~~ll~--~~D~V~i~tp~~~h~~~~~~al~~gk~vl~-EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p  130 (308)
T 3uuw_A           58 ----DSIESLAK--KCDCIFLHSSTETHYEIIKILLNLGVHVYV-DKPLASTVSQGEELIELSTKKNLNLMVGFNRRFCP  130 (308)
T ss_dssp             ----SCHHHHHT--TCSEEEECCCGGGHHHHHHHHHHTTCEEEE-CSSSSSSHHHHHHHHHHHHHHTCCEEECCGGGGCH
T ss_pred             ----CCHHHHHh--cCCEEEEeCCcHhHHHHHHHHHHCCCcEEE-cCCCCCCHHHHHHHHHHHHHcCCEEEEeeccccCH
Confidence                12345555  699999998888888889999999998653 3322111  2334667888888766432 223344


Q ss_pred             HHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCCccceehhhhcchhHHHhh-hhhhcCCCCC
Q 017567          231 IFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFGAEYD  309 (369)
Q Consensus       231 IfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~KITIDSATmmNKgLEvIE-A~~LF~i~~d  309 (369)
                      .||-++.. -.+++-+.++..    |.              -..+.|.-|       ..|++-|.-.|. ++||||-|.+
T Consensus       131 ~~~~~~~~-ig~~~~~~~~~~----r~--------------~~~~~~~~~-------g~l~d~g~H~id~~~~l~G~~~~  184 (308)
T 3uuw_A          131 MYKEIKNN-ATEIVSINICKH----GL--------------NSLRNVRFD-------STLIDDYIHVIDTALWLANEDVE  184 (308)
T ss_dssp             HHHHHHHH-CCSEEEEEEEEE----CS--------------SCCCSSCHH-------HHHHHTHHHHHHHHHHHHCSCCE
T ss_pred             HHHHHHHH-cCCCcEEEEEec----cC--------------CCCCccccC-------ceeeecchHHHHHHHHHcCCCce
Confidence            44444321 112333333321    11              012356532       367777765554 6899994332


Q ss_pred             ceeEEEc---CC--cceeeeEEeccCcEEEecC
Q 017567          310 NIEIIIH---PQ--SIIHSMVETQDSSVIGQLG  337 (369)
Q Consensus       310 ~IevvIH---Pq--SiIHsmVef~DGSv~Aql~  337 (369)
                      -+-....   ..  -..+..++|.||.....++
T Consensus       185 v~~~~~~~~~~~~~d~~~~~l~~~~g~~~~~~s  217 (308)
T 3uuw_A          185 ISGEDLFLTDNKNLIFVSHKLKGKNFSINTSMH  217 (308)
T ss_dssp             EEEEEEEECTTSCEEEEEEEEECSSCEEEEEEE
T ss_pred             EEEeeeeecCCCceeEEEEEEEeCCEEEEEEEE
Confidence            2222211   11  1344555666664444443

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=96.48  E-value=0.015  Score=49.62  Aligned_cols=38  Identities=24%  Similarity=0.429  Sum_probs=30.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLA  118 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~  118 (369)
                      +||.|+|+||.||....+-+.+.  .++|++++=  +-+.+.
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~--g~~V~~~~R--~~~~~~   38 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNR--GHEVTAIVR--NAGKIT   38 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEES--CSHHHH
T ss_pred             CeEEEEcCCchhHHHHHHHHHhC--CCEEEEEEc--Cchhhh
Confidence            36999999999999999998876  588988763  334443

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=96.47  E-value=0.068  Score=41.14  Aligned_cols=41  Identities=22%  Similarity=0.357  Sum_probs=31.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ  120 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ  120 (369)
                      +++|.|+|+ |.||......+.+.. .++|+++.  +|-+++.+.
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g-~~~v~~~~--r~~~~~~~~   45 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSS-NYSVTVAD--HDLAALAVL   45 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCS-SEEEEEEE--SCHHHHHHH
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCC-CceEEEEe--CCHHHHHHH
Confidence            468999999 999999999998873 37876654  566665443

>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}

Probab=96.45  E-value=0.0094  Score=56.50  Aligned_cols=134  Identities=18%  Similarity=0.207  Sum_probs=91.1

Q ss_pred             CCCeeEEEEecCChHhH-HHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCce
Q 017567           74 DGPKPISVLGSTGSIGT-QTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPE  152 (369)
Q Consensus        74 ~~~kkI~ILGSTGSIGt-qTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~  152 (369)
                      ..+.||+|+|+ |.||. +-+..++++|+ ++|+|++..+- +       ++                         ++.
T Consensus        23 M~~~rvgiiG~-G~ig~~~~~~~l~~~~~-~~lvav~d~~~-~-------~~-------------------------g~~   67 (330)
T 4ew6_A           23 MSPINLAIVGV-GKIVRDQHLPSIAKNAN-FKLVATASRHG-T-------VE-------------------------GVN   67 (330)
T ss_dssp             CCCEEEEEECC-SHHHHHTHHHHHHHCTT-EEEEEEECSSC-C-------CT-------------------------TSE
T ss_pred             CCCceEEEEec-CHHHHHHHHHHHHhCCC-eEEEEEEeCCh-h-------hc-------------------------CCC
Confidence            34569999995 99998 89999999875 99999886541 1       01                         133


Q ss_pred             EEecHHHHHHHhcC-CCCCEEEEeccCccCcHHHHHHHHcCCceeeecccce--eecccchhHHhhhcCCeEeec-----
Q 017567          153 ILAGEQGVIEAARH-PDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILPA-----  224 (369)
Q Consensus       153 v~~G~~gl~~~~~~-~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsL--V~aG~li~~~a~k~~~~IlPV-----  224 (369)
                      ++.   .+.++++. +++|.|+.+..-..-..-+.+|+++||.|.+ -|=.-  +.-..-+.++|+++|..+.--     
T Consensus        68 ~~~---~~~~ll~~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~-EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~  143 (330)
T 4ew6_A           68 SYT---TIEAMLDAEPSIDAVSLCMPPQYRYEAAYKALVAGKHVFL-EKPPGATLSEVADLEALANKQGASLFASWHSRY  143 (330)
T ss_dssp             EES---SHHHHHHHCTTCCEEEECSCHHHHHHHHHHHHHTTCEEEE-CSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGG
T ss_pred             ccC---CHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHcCCcEEE-eCCCCCCHHHHHHHHHHHHhcCCeEEEEehhhc
Confidence            332   34555555 7899999998888888889999999999874 44211  222345678888888766532     


Q ss_pred             ccchhhHHHhhcCCCCCccceEEEe
Q 017567          225 DSEHSAIFQCIQGLPEGALRRIILT  249 (369)
Q Consensus       225 DSEHsAIfQ~L~g~~~~~v~kiiLT  249 (369)
                      +..+..+-+.|+..   .|-++...
T Consensus       144 ~p~~~~~k~~i~~g---~iG~v~~~  165 (330)
T 4ew6_A          144 APAVEAAKAFLAST---TIKSVHVI  165 (330)
T ss_dssp             STTHHHHHHHHHSS---CEEEEEEE
T ss_pred             cHHHHHHHHHHhcC---CceEEEEE
Confidence            44555666666543   45555443

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=96.44  E-value=0.0068  Score=58.02  Aligned_cols=98  Identities=15%  Similarity=0.165  Sum_probs=70.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHh-CCCceEEEEEeecCCHHH-HHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAE-HEDKFRVVALAAGSNITL-LADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI  153 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~-~pd~F~VvaLaag~Nv~l-L~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v  153 (369)
                      +.||+|+| +|.||+..+..+.+ +| .+++++++.. +.+. ..+.+++|.....  .                     
T Consensus         4 ~irVaIIG-~G~iG~~~~~~l~~~~~-~~elvav~d~-~~~~~~~~~a~~~g~~~~--~---------------------   57 (312)
T 1nvm_B            4 KLKVAIIG-SGNIGTDLMIKVLRNAK-YLEMGAMVGI-DAASDGLARAQRMGVTTT--Y---------------------   57 (312)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHHHCS-SEEEEEEECS-CTTCHHHHHHHHTTCCEE--S---------------------
T ss_pred             CCEEEEEc-CcHHHHHHHHHHHhhCc-CeEEEEEEeC-ChhhhHHHHHHHcCCCcc--c---------------------
Confidence            45899999 79999999999966 65 5899987754 3333 3344556653311  0                     


Q ss_pred             EecHHHHHHHhcC---CCCCEEEEeccCccCcHHHHHHHHc--CCceeeecccce
Q 017567          154 LAGEQGVIEAARH---PDAVTVVTGIVGCAGLKPTVAAIEA--GKDIALANKETL  203 (369)
Q Consensus       154 ~~G~~gl~~~~~~---~~~D~Vv~AIvG~aGL~pt~~Ai~~--gK~iaLANKEsL  203 (369)
                          +.+.++.+.   +++|+|+.+...-....-...|+++  ||.|...|.-.+
T Consensus        58 ----~~~e~ll~~~~~~~iDvV~~atp~~~h~~~a~~al~a~~Gk~Vi~ekp~~~  108 (312)
T 1nvm_B           58 ----AGVEGLIKLPEFADIDFVFDATSASAHVQNEALLRQAKPGIRLIDLTPAAI  108 (312)
T ss_dssp             ----SHHHHHHHSGGGGGEEEEEECSCHHHHHHHHHHHHHHCTTCEEEECSTTCS
T ss_pred             ----CCHHHHHhccCCCCCcEEEECCChHHHHHHHHHHHHhCCCCEEEEcCcccc
Confidence                122333333   5799999998878888889999999  999988776654

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=96.36  E-value=0.019  Score=51.78  Aligned_cols=34  Identities=26%  Similarity=0.295  Sum_probs=28.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (369)
                      +++|.|+|+||.||.+.++-+.+.  .++|++++-.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~   35 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKA--GNPTYALVRK   35 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHH--TCCEEEEECC
T ss_pred             CcEEEEECCCchHHHHHHHHHHhC--CCcEEEEECC
Confidence            468999999999999999988775  4788887643

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.11  E-value=0.019  Score=53.42  Aligned_cols=33  Identities=30%  Similarity=0.510  Sum_probs=29.1

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (369)
                      ||+|.|+||-+|+...+.+.+.|+ ++|++..-.
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~-~elva~~d~   34 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADD-LTLSAELDA   34 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTT-CEEEEEECT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-CEEEEEEcc
Confidence            799999999999999999987765 899988754

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=96.02  E-value=0.017  Score=53.16  Aligned_cols=37  Identities=19%  Similarity=0.417  Sum_probs=30.7

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        74 ~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      ..+|+|.|.|+||+||...++-+.+....++|+++.-
T Consensus        22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~   58 (346)
T 4egb_A           22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDA   58 (346)
T ss_dssp             --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEEC
T ss_pred             cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEec
Confidence            3457899999999999999998888766799999864

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=95.98  E-value=0.048  Score=49.06  Aligned_cols=34  Identities=21%  Similarity=0.275  Sum_probs=28.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (369)
                      +++|.|+|+||.||...++-+.+.  .++|++++-.
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~   37 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDL--GHPTFLLVRE   37 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhC--CCCEEEEECC
Confidence            578999999999999999998876  4788887643

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=95.94  E-value=0.072  Score=53.70  Aligned_cols=116  Identities=18%  Similarity=0.191  Sum_probs=71.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      +++|.|+|+ |.||+..+..+.+.++ ++|+.  +++|.+++.+.+++.....+. .|-...                  
T Consensus        23 ~k~VlIiGA-GgiG~aia~~L~~~~g-~~V~v--~~R~~~ka~~la~~~~~~~~~-~D~~d~------------------   79 (467)
T 2axq_A           23 GKNVLLLGS-GFVAQPVIDTLAANDD-INVTV--ACRTLANAQALAKPSGSKAIS-LDVTDD------------------   79 (467)
T ss_dssp             CEEEEEECC-STTHHHHHHHHHTSTT-EEEEE--EESSHHHHHHHHGGGTCEEEE-CCTTCH------------------
T ss_pred             CCEEEEECC-hHHHHHHHHHHHhCCC-CeEEE--EECCHHHHHHHHHhcCCcEEE-EecCCH------------------
Confidence            478999998 9999999999998754 67543  356777777666553322222 222222                  


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHH--HHHHHHcCCceeeecccceeecccchhHHhhhcCCeEe
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKP--TVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKIL  222 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~p--t~~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~~~~Il  222 (369)
                        +.+.++.+  ++|+||++..-  ++.+  ..++++.|+.+.-.|=.  ...-.-+.+.|++.|+.++
T Consensus        80 --~~l~~~l~--~~DvVIn~tp~--~~~~~v~~a~l~~g~~vvd~~~~--~p~~~~Ll~~Ak~aGv~~i  140 (467)
T 2axq_A           80 --SALDKVLA--DNDVVISLIPY--TFHPNVVKSAIRTKTDVVTSSYI--SPALRELEPEIVKAGITVM  140 (467)
T ss_dssp             --HHHHHHHH--TSSEEEECSCG--GGHHHHHHHHHHHTCEEEECSCC--CHHHHHHHHHHHHHTCEEE
T ss_pred             --HHHHHHHc--CCCEEEECCch--hhhHHHHHHHHhcCCEEEEeecC--CHHHHHHHHHHHHcCCEEE
Confidence              22333333  58999999653  3333  45678888877654310  0011345678888887765

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=95.91  E-value=0.036  Score=50.57  Aligned_cols=34  Identities=18%  Similarity=0.252  Sum_probs=28.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS  112 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~  112 (369)
                      |+|.|+|+||.||...++-+.+.  .++|++++-..
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~   45 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKL--GHPTYVFTRPN   45 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHT--TCCEEEEECTT
T ss_pred             CeEEEECCCchHHHHHHHHHHHC--CCcEEEEECCC
Confidence            58999999999999999998876  48898887543

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=95.86  E-value=0.048  Score=49.62  Aligned_cols=34  Identities=21%  Similarity=0.221  Sum_probs=29.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (369)
                      +++|.|+|+||.||...++-+.+.  .++|++++-.
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~   37 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSF--SHPTFIYARP   37 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHT--TCCEEEEECC
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhC--CCcEEEEECC
Confidence            568999999999999999998875  4788887644

>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}

Probab=95.85  E-value=0.015  Score=54.71  Aligned_cols=124  Identities=12%  Similarity=0.080  Sum_probs=75.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      +.||+|+|+ |.||+.-+..++++|+ ++|+|+.. .|-+.+.+    +...+                          .
T Consensus         9 ~irv~IIG~-G~iG~~~~~~l~~~~~-~elvav~d-~~~~~~~~----~g~~~--------------------------~   55 (304)
T 3bio_A            9 KIRAAIVGY-GNIGRYALQALREAPD-FEIAGIVR-RNPAEVPF----ELQPF--------------------------R   55 (304)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCTT-EEEEEEEC-C-----------CCTTS--------------------------C
T ss_pred             CCEEEEECC-hHHHHHHHHHHhcCCC-CEEEEEEc-CCHHHHHH----cCCCc--------------------------C
Confidence            569999997 9999999999999876 99999764 44443321    21110                          0


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccc---eeecccchhHHhhhcCCeEee---cccchh
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKET---LIAGGPFVLPLAHKHNIKILP---ADSEHS  229 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEs---LV~aG~li~~~a~k~~~~IlP---VDSEHs  229 (369)
                      +-+.   +.+..++|+|+.+..-..-..-..+|+++||.+..- |-.   .+.-..-+.+.+++.|..+.-   -+..+.
T Consensus        56 ~~~~---l~~~~~~DvViiatp~~~h~~~~~~al~aG~~Vi~e-kP~~a~~~~~~~~l~~~a~~~g~~~~v~~~~~p~~~  131 (304)
T 3bio_A           56 VVSD---IEQLESVDVALVCSPSREVERTALEILKKGICTADS-FDIHDGILALRRSLGDAAGKSGAAAVIASGWDPGSD  131 (304)
T ss_dssp             EESS---GGGSSSCCEEEECSCHHHHHHHHHHHHTTTCEEEEC-CCCGGGHHHHHHHHHHHHHHHTCEEECSCBBTTBHH
T ss_pred             CHHH---HHhCCCCCEEEECCCchhhHHHHHHHHHcCCeEEEC-CCCCCCCHHHHHHHHHHHHhCCCEEEEeCCCCHHHH
Confidence            1112   222357999999987666677788999999988753 321   112224456777777754321   233444


Q ss_pred             hHHHhhc
Q 017567          230 AIFQCIQ  236 (369)
Q Consensus       230 AIfQ~L~  236 (369)
                      .+-+.|.
T Consensus       132 ~~~~~i~  138 (304)
T 3bio_A          132 SVVRTLM  138 (304)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            4445554

>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1

Probab=95.77  E-value=0.059  Score=52.08  Aligned_cols=105  Identities=18%  Similarity=0.215  Sum_probs=64.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      +.||+|+|+ |.||+..++.+.+||+ |+|+++.-.+ .+.....+.+..-+ +.-.-......+.+    .  +..+- 
T Consensus         1 mikVgIiGa-G~iG~~l~r~L~~~~~-~elvav~d~~-~~~~~~~~~~~g~~-~~~~~~~~v~~~~~----~--~l~v~-   69 (337)
T 1cf2_P            1 MKAVAINGY-GTVGKRVADAIAQQDD-MKVIGVSKTR-PDFEARMALKKGYD-LYVAIPERVKLFEK----A--GIEVA-   69 (337)
T ss_dssp             CEEEEEECC-STTHHHHHHHHHTSSS-EEEEEEEESS-CSHHHHHHHHTTCC-EEESSGGGHHHHHH----T--TCCCC-
T ss_pred             CeEEEEEeE-CHHHHHHHHHHHcCCC-cEEEEEEcCC-hhHHHHhcCCcchh-hccccccceeeecC----C--ceEEc-
Confidence            358999999 9999999999999876 9999987653 23333333332101 11111111111211    1  11121 


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCce
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~i  195 (369)
                      |  ...++..  ++|+|+.+........-.-+++++|+++
T Consensus        70 ~--~~~~~~~--~vDvV~~atp~~~~~~~a~~~l~aG~~V  105 (337)
T 1cf2_P           70 G--TVDDMLD--EADIVIDCTPEGIGAKNLKMYKEKGIKA  105 (337)
T ss_dssp             E--EHHHHHH--TCSEEEECCSTTHHHHHHHHHHHHTCCE
T ss_pred             C--CHHHHhc--CCCEEEECCCchhhHHHHHHHHHcCCEE
Confidence            2  2334443  6999999988888778788899999874

>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*

Probab=95.74  E-value=0.011  Score=55.09  Aligned_cols=125  Identities=12%  Similarity=0.097  Sum_probs=85.0

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhC--CCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCce
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEH--EDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPE  152 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~--pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~  152 (369)
                      .+.||+|+|. |.||+.-++.+.+.  .+.++|++++..+.      .++++                         ++.
T Consensus         6 ~~~rvgiIG~-G~iG~~~~~~l~~~~~~~~~~lvav~d~~~------~a~~~-------------------------g~~   53 (294)
T 1lc0_A            6 GKFGVVVVGV-GRAGSVRLRDLKDPRSAAFLNLIGFVSRRE------LGSLD-------------------------EVR   53 (294)
T ss_dssp             CSEEEEEECC-SHHHHHHHHHHTSHHHHTTEEEEEEECSSC------CCEET-------------------------TEE
T ss_pred             CcceEEEEEE-cHHHHHHHHHHhccccCCCEEEEEEECchH------HHHHc-------------------------CCC
Confidence            4569999997 99999988887762  34699999876431      00000                         111


Q ss_pred             EEecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeeccccee--ecccchhHHhhhcCCeEe-ecccchh
Q 017567          153 ILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLI--AGGPFVLPLAHKHNIKIL-PADSEHS  229 (369)
Q Consensus       153 v~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV--~aG~li~~~a~k~~~~Il-PVDSEHs  229 (369)
                        .  ..+.++++.+++|.|+.+..-..-..-+.+|+++||.|.+ .|=.-.  .-..-+.++|+++|..+. --..-|+
T Consensus        54 --~--~~~~ell~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~-EKPla~~~~ea~~l~~~a~~~g~~~~~~~~~r~~  128 (294)
T 1lc0_A           54 --Q--ISLEDALRSQEIDVAYICSESSSHEDYIRQFLQAGKHVLV-EYPMTLSFAAAQELWELAAQKGRVLHEEHVELLM  128 (294)
T ss_dssp             --B--CCHHHHHHCSSEEEEEECSCGGGHHHHHHHHHHTTCEEEE-ESCSCSCHHHHHHHHHHHHHTTCCEEEECGGGGS
T ss_pred             --C--CCHHHHhcCCCCCEEEEeCCcHhHHHHHHHHHHCCCcEEE-eCCCCCCHHHHHHHHHHHHHhCCEEEEEEhHhcc
Confidence              1  2466777778899999999888888899999999998876 564322  234557788888887644 3344444


Q ss_pred             hHHHhhc
Q 017567          230 AIFQCIQ  236 (369)
Q Consensus       230 AIfQ~L~  236 (369)
                      ..||.++
T Consensus       129 p~~~~~~  135 (294)
T 1lc0_A          129 EEFEFLR  135 (294)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            4454443

>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1

Probab=95.71  E-value=0.019  Score=55.66  Aligned_cols=111  Identities=15%  Similarity=0.154  Sum_probs=71.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec-CCHHHHHHHHH--hhCCCE---EEEcCchhHHHHHHHHhcCCCC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-SNITLLADQVK--RFKPQV---VAVRNESLLDEIKEALANVEEK  150 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag-~Nv~lL~eQ~~--~FkP~~---V~v~de~~~~~l~~~l~~~~~~  150 (369)
                      .||+|.|. |-||+..++.+.++|+ ++|+++... .+.+.++.+.+  .-.+++   +-..+..        +.-.+..
T Consensus         4 ikVgI~G~-G~iGr~~~R~l~~~~~-vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~--------l~v~g~~   73 (335)
T 1u8f_O            4 VKVGVNGF-GRIGRLVTRAAFNSGK-VDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGK--------LVINGNP   73 (335)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCS-SEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTE--------EEETTEE
T ss_pred             eEEEEEcc-CHHHHHHHHHHHcCCC-cEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCe--------EEECCeE
Confidence            48999996 9999999999998875 999999874 78888887776  112221   1111100        0000111


Q ss_pred             ceEEecHHHHHHH-hcCCCCCEEEEeccCccCcHHHHHHHHcC-Cceeee
Q 017567          151 PEILAGEQGVIEA-ARHPDAVTVVTGIVGCAGLKPTVAAIEAG-KDIALA  198 (369)
Q Consensus       151 ~~v~~G~~gl~~~-~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~g-K~iaLA  198 (369)
                      ++++.- ....++ ....++|+|+.+...+...+-.-+++++| |.|-+.
T Consensus        74 i~v~~~-~d~~~l~~~~~~vDvV~eatg~~~~~e~a~~~l~aGak~V~iS  122 (335)
T 1u8f_O           74 ITIFQE-RDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIIS  122 (335)
T ss_dssp             EEEECC-SSGGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEES
T ss_pred             EEEEec-CCHHHCccccCCCCEEEECCCchhhHHHHHHHHhCCCeEEEec
Confidence            222211 112222 11246999999998888888888899999 666665

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=95.63  E-value=0.042  Score=51.30  Aligned_cols=91  Identities=11%  Similarity=0.177  Sum_probs=61.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCch-hHHHHHHHHhcCCCCceEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNES-LLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~-~~~~l~~~l~~~~~~~~v~  154 (369)
                      -++|.|.|++|.||..++.+.+..  ..+|++..  +|-+++. .++++..+.+.-.++. ..+.+              
T Consensus       149 g~~vlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~--~~~~~~~-~~~~~ga~~~~~~~~~~~~~~~--------------  209 (334)
T 3qwb_A          149 GDYVLLFAAAGGVGLILNQLLKMK--GAHTIAVA--STDEKLK-IAKEYGAEYLINASKEDILRQV--------------  209 (334)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEE--SSHHHHH-HHHHTTCSEEEETTTSCHHHHH--------------
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEe--CCHHHHH-HHHHcCCcEEEeCCCchHHHHH--------------
Confidence            368999999999999999999986  56888765  4556654 7788888776654332 22222              


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcC
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~g  192 (369)
                            .++.....+|+|+++..+ ..+...+.+++.|
T Consensus       210 ------~~~~~~~g~D~vid~~g~-~~~~~~~~~l~~~  240 (334)
T 3qwb_A          210 ------LKFTNGKGVDASFDSVGK-DTFEISLAALKRK  240 (334)
T ss_dssp             ------HHHTTTSCEEEEEECCGG-GGHHHHHHHEEEE
T ss_pred             ------HHHhCCCCceEEEECCCh-HHHHHHHHHhccC
Confidence                  233333369999998655 5555555555544

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=95.54  E-value=0.048  Score=52.07  Aligned_cols=93  Identities=17%  Similarity=0.128  Sum_probs=63.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      .+|.|.|++|.||..++.+.+..  ..+|++.+.   -+++ +.++++..+.+.-..+...   .               
T Consensus       166 ~~VlV~Ga~G~vG~~a~qla~~~--Ga~Vi~~~~---~~~~-~~~~~lGa~~vi~~~~~~~---~---------------  221 (371)
T 3gqv_A          166 VYVLVYGGSTATATVTMQMLRLS--GYIPIATCS---PHNF-DLAKSRGAEEVFDYRAPNL---A---------------  221 (371)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEEC---GGGH-HHHHHTTCSEEEETTSTTH---H---------------
T ss_pred             cEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeC---HHHH-HHHHHcCCcEEEECCCchH---H---------------
Confidence            57999999999999999999986  568988752   2333 4678888887765433221   1               


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHH-HcCCce
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAI-EAGKDI  195 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai-~~gK~i  195 (369)
                       +.+.++... .+|+|++++.|-..+...+.++ +.|-++
T Consensus       222 -~~v~~~t~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~i  259 (371)
T 3gqv_A          222 -QTIRTYTKN-NLRYALDCITNVESTTFCFAAIGRAGGHY  259 (371)
T ss_dssp             -HHHHHHTTT-CCCEEEESSCSHHHHHHHHHHSCTTCEEE
T ss_pred             -HHHHHHccC-CccEEEECCCchHHHHHHHHHhhcCCCEE
Confidence             122233322 4999999987767777777777 444333

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=95.49  E-value=0.024  Score=50.69  Aligned_cols=55  Identities=16%  Similarity=0.399  Sum_probs=43.8

Q ss_pred             CCe-eEEEEecCChHhHHHHHHHHhCCCceEEEEEee----cCCHHHHHHHHHhhCCCEEEE
Q 017567           75 GPK-PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA----GSNITLLADQVKRFKPQVVAV  131 (369)
Q Consensus        75 ~~k-kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa----g~Nv~lL~eQ~~~FkP~~V~v  131 (369)
                      .|| +|.|.|+||.||....+-+.+.  .++|++++-    -.+.+.+.+..++++++.|.-
T Consensus         3 ~M~m~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~D~~d~~~~~~~~~~~~~d~vi~   62 (287)
T 3sc6_A            3 AMKERVIITGANGQLGKQLQEELNPE--EYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIH   62 (287)
T ss_dssp             --CEEEEEESTTSHHHHHHHHHSCTT--TEEEEEECTTTSCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             cceeEEEEECCCCHHHHHHHHHHHhC--CCEEEEecccccCCCCHHHHHHHHHhcCCCEEEE
Confidence            456 8999999999999999888765  699999863    246778888888888988874

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=95.48  E-value=0.05  Score=50.43  Aligned_cols=40  Identities=18%  Similarity=0.131  Sum_probs=31.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC--CHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS--NITLL  117 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~--Nv~lL  117 (369)
                      +++|.|+|+||.||...++-+.+..  ++|++++-..  +-+++
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~~~~~   51 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAH--RPTYILARPGPRSPSKA   51 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTT--CCEEEEECSSCCCHHHH
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCC--CCEEEEECCCCCChhHH
Confidence            4689999999999999999998874  7898887644  44444

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=95.43  E-value=0.086  Score=47.56  Aligned_cols=67  Identities=18%  Similarity=0.222  Sum_probs=41.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALA  145 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~  145 (369)
                      +|+|.|+|+||.||....+-+.+.. .++|++++-...-... +....-+.++ ...|-.+.+.+.+.+.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~~V~~~~R~~~~~~~-~~l~~~~~~~-~~~D~~d~~~l~~~~~   71 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDG-TFKVRVVTRNPRKKAA-KELRLQGAEV-VQGDQDDQVIMELALN   71 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHC-SSEEEEEESCTTSHHH-HHHHHTTCEE-EECCTTCHHHHHHHHT
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcC-CceEEEEEcCCCCHHH-HHHHHCCCEE-EEecCCCHHHHHHHHh
Confidence            4689999999999999999887753 2889988743321111 1122222222 3345555555665554

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=95.42  E-value=0.038  Score=49.49  Aligned_cols=56  Identities=18%  Similarity=0.283  Sum_probs=42.8

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec----CCHHHHHHHHHhhCCCEEEE
Q 017567           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG----SNITLLADQVKRFKPQVVAV  131 (369)
Q Consensus        74 ~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag----~Nv~lL~eQ~~~FkP~~V~v  131 (369)
                      .-+++|.|.|+||+||....+-+.+.  .++|+++.-.    .+.+.+.+..++.+++.|+-
T Consensus        10 ~~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~Dl~d~~~~~~~~~~~~~d~vih   69 (292)
T 1vl0_A           10 HHHMKILITGANGQLGREIQKQLKGK--NVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVIN   69 (292)
T ss_dssp             --CEEEEEESTTSHHHHHHHHHHTTS--SEEEEEECTTTCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             cccceEEEECCCChHHHHHHHHHHhC--CCeEEeccCccCCCCCHHHHHHHHHhcCCCEEEE
Confidence            45689999999999999999988875  6999998632    35566766676668888764

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=95.42  E-value=0.097  Score=49.22  Aligned_cols=48  Identities=17%  Similarity=0.295  Sum_probs=34.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK  125 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~Fk  125 (369)
                      .|+|.|.|+||+||....+-+.+.+.-++|++++  ++-+.+.+..+++.
T Consensus        21 ~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~--r~~~~~~~~~~~~~   68 (344)
T 2gn4_A           21 NQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYS--RDELKQSEMAMEFN   68 (344)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEE--SCHHHHHHHHHHHC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEE--CChhhHHHHHHHhc
Confidence            4689999999999999999887753334788765  45555555555553

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=95.39  E-value=0.079  Score=52.27  Aligned_cols=44  Identities=16%  Similarity=0.174  Sum_probs=34.8

Q ss_pred             CCCCCeeEEEEecCChHhHHHHHHHHhCCC-ceEEEEEeecCCHH
Q 017567           72 TWDGPKPISVLGSTGSIGTQTLDIVAEHED-KFRVVALAAGSNIT  115 (369)
Q Consensus        72 ~~~~~kkI~ILGSTGSIGtqTLdVI~~~pd-~F~VvaLaag~Nv~  115 (369)
                      ....+|+|.|.|+||+||...++-+.+.+. .++|+++.=..+-+
T Consensus        69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~  113 (478)
T 4dqv_A           69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDE  113 (478)
T ss_dssp             CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcH
Confidence            344568999999999999999988877655 48999998655433

>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}

Probab=95.38  E-value=0.031  Score=50.19  Aligned_cols=115  Identities=16%  Similarity=0.179  Sum_probs=74.0

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEecH
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGE  157 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G~  157 (369)
                      ||+|+|. |.+|+.-...+.+  ..|+|+++... + +..    ++      ..                          
T Consensus         2 ~vgiIG~-G~mG~~~~~~l~~--~g~~lv~v~d~-~-~~~----~~------~~--------------------------   40 (236)
T 2dc1_A            2 LVGLIGY-GAIGKFLAEWLER--NGFEIAAILDV-R-GEH----EK------MV--------------------------   40 (236)
T ss_dssp             EEEEECC-SHHHHHHHHHHHH--TTCEEEEEECS-S-CCC----TT------EE--------------------------
T ss_pred             EEEEECC-CHHHHHHHHHHhc--CCCEEEEEEec-C-cch----hh------hc--------------------------
Confidence            7999997 9999999988874  46999886543 3 111    10      11                          


Q ss_pred             HHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeec--ccchhHHhhhcCCeEeecccchhhHHHhh
Q 017567          158 QGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAG--GPFVLPLAHKHNIKILPADSEHSAIFQCI  235 (369)
Q Consensus       158 ~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~a--G~li~~~a~k~~~~IlPVDSEHsAIfQ~L  235 (369)
                      +.+.+++. .++|+|+.+..-..-..-...++++||.+..-..-++-..  ..-+.++++++|..++ +|+-.+.-.+.+
T Consensus        41 ~~~~~l~~-~~~DvVv~~~~~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~~~-i~~~~~g~~~~~  118 (236)
T 2dc1_A           41 RGIDEFLQ-REMDVAVEAASQQAVKDYAEKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTGRRVY-IASGAIGGLDAI  118 (236)
T ss_dssp             SSHHHHTT-SCCSEEEECSCHHHHHHHHHHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCCCEE-ECCTTCSCHHHH
T ss_pred             CCHHHHhc-CCCCEEEECCCHHHHHHHHHHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcCCeEE-ecCccccChHHH
Confidence            11234554 5689999998777767777889999998776543222111  1456677888888765 555544333333

>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1

Probab=95.37  E-value=0.068  Score=51.68  Aligned_cols=106  Identities=15%  Similarity=0.157  Sum_probs=66.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      .||+|+|+ |.||+..++.+.++|+ |+|+++... +.+...+.+++..-..  ..+ ...+++   +.+.  ++.+. +
T Consensus         2 ikVgIiGa-G~iG~~~~r~L~~~p~-~elvav~d~-~~~~~~~~a~~~g~~~--~~~-~~~~~~---~~~~--~v~v~-~   69 (340)
T 1b7g_O            2 VNVAVNGY-GTIGKRVADAIIKQPD-MKLVGVAKT-SPNYEAFIAHRRGIRI--YVP-QQSIKK---FEES--GIPVA-G   69 (340)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTCTT-EEEEEEECS-SCSHHHHHHHHTTCCE--ECC-GGGHHH---HHTT--TCCCC-C
T ss_pred             eEEEEEec-CHHHHHHHHHHHcCCC-CEEEEEEcC-ChHHHHHHHHhcCcce--ecC-cCHHHH---hccc--ccccc-c
Confidence            58999999 9999999999999875 999999875 4455555565543221  222 112221   2211  12222 1


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeee
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALA  198 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLA  198 (369)
                        .+.++..  ++|+|+.+........-.-.++++|+++...
T Consensus        70 --~~e~l~~--~vDvV~~aTp~~~s~~~a~~~~~aG~kvV~~  107 (340)
T 1b7g_O           70 --TVEDLIK--TSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQ  107 (340)
T ss_dssp             --CHHHHHH--HCSEEEECCSTTHHHHHHHHHHHTTCEEEEC
T ss_pred             --CHhHhhc--CCCEEEECCCCchhHHHHHHHHHcCCeEEEe
Confidence              2334433  5899999977666666666778999765444

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=95.35  E-value=0.16  Score=44.82  Aligned_cols=65  Identities=18%  Similarity=0.152  Sum_probs=47.3

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHH
Q 017567           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKE  142 (369)
Q Consensus        74 ~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~  142 (369)
                      ...|+|.|.|+||.||..+.+-+.+.  .++|+.+  .+|.+.+.+..+++..++..+ .|-...+.+++
T Consensus        12 ~~~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   77 (249)
T 3f9i_A           12 LTGKTSLITGASSGIGSAIARLLHKL--GSKVIIS--GSNEEKLKSLGNALKDNYTIEVCNLANKEECSN   77 (249)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEE--cCCHHHHHHHHHHhccCccEEEcCCCCHHHHHH
Confidence            44578999999999999999988876  5777754  368888888888887665543 44444444443

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=95.33  E-value=0.09  Score=46.18  Aligned_cols=81  Identities=15%  Similarity=0.145  Sum_probs=53.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCE--EEEcCchhHHHHHHHHhcCCCCceE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQV--VAVRNESLLDEIKEALANVEEKPEI  153 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~--V~v~de~~~~~l~~~l~~~~~~~~v  153 (369)
                      .|++.|.|+||.||....+-+.+.  .++|+++.  +|.+.+.+..++...+.  +...|-.+.+.+++.+.        
T Consensus        11 ~k~vlITGasggiG~~la~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--------   78 (254)
T 2wsb_A           11 GACAAVTGAGSGIGLEICRAFAAS--GARLILID--REAAALDRAAQELGAAVAARIVADVTDAEAMTAAAA--------   78 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHH--------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHH--------
Confidence            368999999999999999998886  57887764  56777777666664443  23345455555554331        


Q ss_pred             EecHHHHHHHhcCCCCCEEEEec
Q 017567          154 LAGEQGVIEAARHPDAVTVVTGI  176 (369)
Q Consensus       154 ~~G~~gl~~~~~~~~~D~Vv~AI  176 (369)
                           .+.+   ...+|+||+..
T Consensus        79 -----~~~~---~~~id~li~~A   93 (254)
T 2wsb_A           79 -----EAEA---VAPVSILVNSA   93 (254)
T ss_dssp             -----HHHH---HSCCCEEEECC
T ss_pred             -----HHHh---hCCCcEEEECC
Confidence                 1122   23589998873

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=95.32  E-value=0.11  Score=51.73  Aligned_cols=117  Identities=14%  Similarity=0.108  Sum_probs=69.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      +|+|.|+| +|.||......+.+.  .++|+.  +.+|.+++.+.+.++..-.....|-...                  
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~--G~~V~v--~~R~~~~a~~la~~~~~~~~~~~Dv~d~------------------   59 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDS--GIKVTV--ACRTLESAKKLSAGVQHSTPISLDVNDD------------------   59 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTT--TCEEEE--EESSHHHHHHTTTTCTTEEEEECCTTCH------------------
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhC--cCEEEE--EECCHHHHHHHHHhcCCceEEEeecCCH------------------
Confidence            46899999 899999999998864  367543  3567777666555553111122222222                  


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceee-cccchhHHhhhcCCeEe
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIA-GGPFVLPLAHKHNIKIL  222 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~-aG~li~~~a~k~~~~Il  222 (369)
                        +.+.++.+  ++|+|+++..-...-.-..++++.|+.+.-.+   ... +-.-+.+.|++.|+.++
T Consensus        60 --~~l~~~l~--~~DvVIn~a~~~~~~~i~~a~l~~g~~vvd~~---~~~~~~~~l~~aA~~aGv~~i  120 (450)
T 1ff9_A           60 --AALDAEVA--KHDLVISLIPYTFHATVIKSAIRQKKHVVTTS---YVSPAMMELDQAAKDAGITVM  120 (450)
T ss_dssp             --HHHHHHHT--TSSEEEECCC--CHHHHHHHHHHHTCEEEESS---CCCHHHHHTHHHHHHTTCEEE
T ss_pred             --HHHHHHHc--CCcEEEECCccccchHHHHHHHhCCCeEEEee---cccHHHHHHHHHHHHCCCeEE
Confidence              23334443  58999998643222122456788888765431   111 22456778888898765

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=95.28  E-value=0.17  Score=44.08  Aligned_cols=63  Identities=17%  Similarity=0.110  Sum_probs=41.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKE  142 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~  142 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+++.  +|.+.+.+..++...-.+...|-.+.+.+++
T Consensus         7 ~~~vlVTGasggiG~~~a~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   69 (244)
T 1cyd_A            7 GLRALVTGAGKGIGRDTVKALHAS--GAKVVAVT--RTNSDLVSLAKECPGIEPVCVDLGDWDATEK   69 (244)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHSTTCEEEECCTTCHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHhccCCCcEEecCCCHHHHHH
Confidence            368999999999999999998875  57887754  5667666665554222222344444434433

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=95.28  E-value=0.1  Score=45.67  Aligned_cols=66  Identities=15%  Similarity=0.117  Sum_probs=44.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec--CCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG--SNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag--~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||....+-+.+.  .++|+++.-.  .+.+.+.++++....+...+ .|-.+.+.+++.
T Consensus         7 ~k~vlVTGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   75 (258)
T 3afn_B            7 GKRVLITGSSQGIGLATARLFARA--GAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQL   75 (258)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence            368999999999999999998875  6788876543  34555666665555443333 454445555543

>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}

Probab=95.23  E-value=0.031  Score=54.43  Aligned_cols=109  Identities=19%  Similarity=0.220  Sum_probs=63.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC-CCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK-PQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~Fk-P~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .||+|+|+ |-||+..++.+.++|+ |+|+|+...+ .+.++...+... .-+--..++....++.+.      ...+ .
T Consensus         3 ikVgI~G~-G~IGr~v~r~l~~~~~-~evvaV~d~~-~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~------~l~v-~   72 (343)
T 2yyy_A            3 AKVLINGY-GSIGKRVADAVSMQDD-MEVIGVTKTK-PDFEARLAVEKGYKLFVAIPDNERVKLFEDA------GIPV-E   72 (343)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHSSS-EEEEEEEESS-CSHHHHHHHHTTCCEEESSCCHHHHHHHHHT------TCCC-C
T ss_pred             eEEEEECC-CHHHHHHHHHHHhCCC-ceEEEEecCC-HHHHHHHHHhcCCccccccCCCceeecccCC------eEEE-C
Confidence            58999999 9999999999998866 9999998753 444444443211 111100011111112211      1112 2


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHH-HHHHHcCCceeeecc
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPT-VAAIEAGKDIALANK  200 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt-~~Ai~~gK~iaLANK  200 (369)
                      |.  ..++.  .++|+|+.+..+.....-. -.++++||++.+ |+
T Consensus        73 ~~--~~~~~--~~vDiV~eatg~~~s~~~a~~~~l~aG~~VI~-sa  113 (343)
T 2yyy_A           73 GT--ILDII--EDADIVVDGAPKKIGKQNLENIYKPHKVKAIL-QG  113 (343)
T ss_dssp             CB--GGGTG--GGCSEEEECCCTTHHHHHHHHTTTTTTCEEEE-CT
T ss_pred             Cc--hHHhc--cCCCEEEECCCccccHHHHHHHHHHCCCEEEE-CC
Confidence            21  12222  2699999997665544544 378899988654 44

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=95.22  E-value=0.16  Score=45.41  Aligned_cols=81  Identities=19%  Similarity=0.188  Sum_probs=55.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHHHhcCCCCceEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+  .+|.+.+.+.+.++.++...+ .|-.+.+.+++.+..        
T Consensus         8 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~--------   75 (259)
T 4e6p_A            8 GKSALITGSARGIGRAFAEAYVRE--GATVAIA--DIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAA--------   75 (259)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHH--------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHH--------
Confidence            468999999999999999988876  5777654  468888888888887765544 444444444443311        


Q ss_pred             ecHHHHHHHhcCCCCCEEEEe
Q 017567          155 AGEQGVIEAARHPDAVTVVTG  175 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~A  175 (369)
                           +.  .....+|+||+.
T Consensus        76 -----~~--~~~g~id~lv~~   89 (259)
T 4e6p_A           76 -----TV--EHAGGLDILVNN   89 (259)
T ss_dssp             -----HH--HHSSSCCEEEEC
T ss_pred             -----HH--HHcCCCCEEEEC
Confidence                 11  123468999886

>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*

Probab=95.22  E-value=0.034  Score=52.50  Aligned_cols=110  Identities=18%  Similarity=0.131  Sum_probs=71.4

Q ss_pred             CCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCce
Q 017567           73 WDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPE  152 (369)
Q Consensus        73 ~~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~  152 (369)
                      ++...||+|.|+||.+|+..++.++++  .|++++..--+...      ++       +                 .+..
T Consensus         4 ~~~~~rVaViG~sG~~G~~~~~~l~~~--g~~~V~~V~p~~~g------~~-------~-----------------~G~~   51 (288)
T 2nu8_A            4 IDKNTKVICQGFTGSQGTFHSEQAIAY--GTKMVGGVTPGKGG------TT-------H-----------------LGLP   51 (288)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHH--TCEEEEEECTTCTT------CE-------E-----------------TTEE
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEeCCCccc------ce-------e-----------------CCee
Confidence            355679999999999999999988886  47866543211000      00       0                 0122


Q ss_pred             EEecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeeccc------chhHHhhhcCCeEe
Q 017567          153 ILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGP------FVLPLAHKHNIKIL  222 (369)
Q Consensus       153 v~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~aG~------li~~~a~k~~~~Il  222 (369)
                      ++.   .+.++.+..++|.++.....-.-..-..+|+++|+++++-     ++.|-      -+.+.|++++..++
T Consensus        52 vy~---sl~el~~~~~~D~viI~tP~~~~~~~~~ea~~~Gi~~iVi-----~t~G~~~~~~~~l~~~A~~~gv~li  119 (288)
T 2nu8_A           52 VFN---TVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIIT-----ITEGIPTLDMLTVKVKLDEAGVRMI  119 (288)
T ss_dssp             EES---SHHHHHHHHCCCEEEECCCGGGHHHHHHHHHHTTCSEEEE-----CCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred             ccC---CHHHHhhcCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE-----ECCCCCHHHHHHHHHHHHHcCCEEE
Confidence            221   2334433336899999999988888899999999875432     22232      45677888888776

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=95.20  E-value=0.02  Score=55.68  Aligned_cols=36  Identities=19%  Similarity=0.386  Sum_probs=32.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS  112 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~  112 (369)
                      |.||+|+|+||-+|.+.++.+.+||+ |++++++..+
T Consensus         4 M~kv~IvGatG~vG~~l~~~L~~~p~-~el~~l~s~~   39 (337)
T 3dr3_A            4 MLNTLIVGASGYAGAELVTYVNRHPH-MNITALTVSA   39 (337)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTT-EEEEEEEEET
T ss_pred             ceEEEEECCCChHHHHHHHHHHhCCC-CcEEEEEecC
Confidence            57999999999999999999999976 8999997765

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=95.18  E-value=0.14  Score=46.21  Aligned_cols=85  Identities=16%  Similarity=0.098  Sum_probs=58.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHHHhcCCCCceEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+  .+|.+.+.+.+.++..+...+ .|-.+.+.+++.+          
T Consensus        30 ~k~vlVTGas~GIG~aia~~l~~~--G~~Vi~~--~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~----------   95 (281)
T 3ppi_A           30 GASAIVSGGAGGLGEATVRRLHAD--GLGVVIA--DLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAI----------   95 (281)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHH----------
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEE--eCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHH----------
Confidence            478999999999999999998876  5777654  467888888888887665444 4444444444432          


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCcc
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCA  180 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~a  180 (369)
                            .++.+....|++|+...|+.
T Consensus        96 ------~~~~~~~~id~lv~~aag~~  115 (281)
T 3ppi_A           96 ------EAANQLGRLRYAVVAHGGFG  115 (281)
T ss_dssp             ------HHHTTSSEEEEEEECCCCCC
T ss_pred             ------HHHHHhCCCCeEEEccCccc
Confidence                  12222346888887655543

>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1

Probab=95.18  E-value=0.022  Score=56.01  Aligned_cols=39  Identities=15%  Similarity=0.337  Sum_probs=34.1

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCH
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNI  114 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv  114 (369)
                      -+.||+|+|+||.+|...++++.+||+ |+|+.++..++.
T Consensus        12 ~~~~V~IvGAtG~vG~ellrlL~~hP~-~el~~l~S~~~a   50 (351)
T 1vkn_A           12 HMIRAGIIGATGYTGLELVRLLKNHPE-AKITYLSSRTYA   50 (351)
T ss_dssp             CCEEEEEESTTSHHHHHHHHHHHHCTT-EEEEEEECSTTT
T ss_pred             ceeEEEEECCCCHHHHHHHHHHHcCCC-cEEEEEeCcccc
Confidence            467999999999999999999999984 899999875443

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=95.16  E-value=0.14  Score=44.63  Aligned_cols=82  Identities=16%  Similarity=0.185  Sum_probs=53.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .|+|.|.|+||.||....+-+.+.  .++|+++.  +|.+.+.+..+++.--.+...|-.+.+.+++.+.          
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----------   70 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAK--GYRVGLMA--RDEKRLQALAAELEGALPLPGDVREEGDWARAVA----------   70 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHH----------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHH----------
Confidence            367999999999999999988875  57887654  5677777666665422333355555555554432          


Q ss_pred             cHHHHHHHhcCCCCCEEEEec
Q 017567          156 GEQGVIEAARHPDAVTVVTGI  176 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AI  176 (369)
                         .+.+..  ..+|+||+..
T Consensus        71 ---~~~~~~--~~id~li~~A   86 (234)
T 2ehd_A           71 ---AMEEAF--GELSALVNNA   86 (234)
T ss_dssp             ---HHHHHH--SCCCEEEECC
T ss_pred             ---HHHHHc--CCCCEEEECC
Confidence               112222  3589998863

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=95.14  E-value=0.2  Score=43.80  Aligned_cols=63  Identities=17%  Similarity=0.158  Sum_probs=42.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKE  142 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~  142 (369)
                      .|+|.|.|+||.||..+.+-+.+.  .++|+.+.  +|.+.+.+..++...-.+...|-.+.+.+++
T Consensus         7 ~k~vlITGasggiG~~~a~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   69 (244)
T 3d3w_A            7 GRRVLVTGAGKGIGRGTVQALHAT--GARVVAVS--RTQADLDSLVRECPGIEPVCVDLGDWEATER   69 (244)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHSTTCEEEECCTTCHHHHHH
T ss_pred             CcEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHcCCCCEEEEeCCCHHHHHH
Confidence            368999999999999999988875  57777654  5667776666655322223444444444443

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=95.13  E-value=0.14  Score=47.23  Aligned_cols=46  Identities=24%  Similarity=0.281  Sum_probs=33.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC--CHHHHHHHHHh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS--NITLLADQVKR  123 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~--Nv~lL~eQ~~~  123 (369)
                      +++|.|.|+||.||....+-+.+.  .++|+++.-..  +.+.+.+...+
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~   74 (352)
T 1sb8_A           27 PKVWLITGVAGFIGSNLLETLLKL--DQKVVGLDNFATGHQRNLDEVRSL   74 (352)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCHHHHHHHHHH
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCccchhhHHHHhhh
Confidence            468999999999999999988875  58899886432  23444443333

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=95.11  E-value=0.088  Score=45.44  Aligned_cols=41  Identities=22%  Similarity=0.258  Sum_probs=33.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLA  118 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~  118 (369)
                      +|+|.|+|+||.||....+-+.+.+..++|++++  ++-+.+.
T Consensus         4 ~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~--r~~~~~~   44 (253)
T 1xq6_A            4 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLV--RSAQGKE   44 (253)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEE--SCHHHHH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEE--cCCCchh
Confidence            5789999999999999999999876578999875  4555543

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=95.09  E-value=0.1  Score=47.50  Aligned_cols=33  Identities=9%  Similarity=0.267  Sum_probs=28.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      ||+|.|.|+||.||....+-+.+.  .++|+++.-
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r   33 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQ--GIDLIVFDN   33 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEEC
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhC--CCEEEEEeC
Confidence            468999999999999999988874  589999863

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=95.04  E-value=0.13  Score=44.80  Aligned_cols=81  Identities=15%  Similarity=0.177  Sum_probs=49.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHH---HHHHHhhCCCEEEE-cCchhHHHHHHHHhcCCCCce
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLL---ADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPE  152 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL---~eQ~~~FkP~~V~v-~de~~~~~l~~~l~~~~~~~~  152 (369)
                      |+|.|.|+||.||....+-+.+.  .++|+.+.. +|.+.+   .+++++..++...+ .|-.+.+.+++.+.       
T Consensus         2 k~vlVTGasggiG~~la~~l~~~--G~~v~~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   71 (244)
T 1edo_A            2 PVVVVTGASRGIGKAIALSLGKA--GCKVLVNYA-RSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMK-------   71 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHT--TCEEEEEES-SCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHH-------
T ss_pred             CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcC-CCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHH-------
Confidence            57999999999999999998875  678877544 344444   34444445444333 44444444444332       


Q ss_pred             EEecHHHHHHHhcCCCCCEEEEe
Q 017567          153 ILAGEQGVIEAARHPDAVTVVTG  175 (369)
Q Consensus       153 v~~G~~gl~~~~~~~~~D~Vv~A  175 (369)
                            .+.  .....+|+||+.
T Consensus        72 ------~~~--~~~g~id~li~~   86 (244)
T 1edo_A           72 ------TAI--DAWGTIDVVVNN   86 (244)
T ss_dssp             ------HHH--HHSSCCSEEEEC
T ss_pred             ------HHH--HHcCCCCEEEEC
Confidence                  111  123468999986

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=95.03  E-value=0.052  Score=53.38  Aligned_cols=51  Identities=10%  Similarity=0.227  Sum_probs=41.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEc
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVR  132 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~  132 (369)
                      .+|.|+|+||.||..++.+.+..  ..+|++++  .+-+++ +.++++..+.+.-.
T Consensus       230 ~~VlV~GasG~vG~~avqlak~~--Ga~vi~~~--~~~~~~-~~~~~lGa~~vi~~  280 (456)
T 3krt_A          230 DNVLIWGASGGLGSYATQFALAG--GANPICVV--SSPQKA-EICRAMGAEAIIDR  280 (456)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHT--TCEEEEEE--SSHHHH-HHHHHHTCCEEEET
T ss_pred             CEEEEECCCCHHHHHHHHHHHHc--CCeEEEEE--CCHHHH-HHHHhhCCcEEEec
Confidence            58999999999999999999987  57888876  355665 46688988877654

>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}

Probab=95.02  E-value=0.17  Score=41.07  Aligned_cols=58  Identities=19%  Similarity=0.309  Sum_probs=46.5

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC--------------HHHHHHHHHhhCCCEEEEcCc
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN--------------ITLLADQVKRFKPQVVAVRNE  134 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~N--------------v~lL~eQ~~~FkP~~V~v~de  134 (369)
                      ..++++|+|+ |..|...++.+++++ .|+|+|+.-...              .+.|.+.+++++.+.|.++-+
T Consensus         3 ~~~~vlIiGa-G~~g~~l~~~l~~~~-g~~vvg~~d~~~~~~g~~i~g~pV~g~~~l~~~~~~~~id~viia~~   74 (141)
T 3nkl_A            3 AKKKVLIYGA-GSAGLQLANMLRQGK-EFHPIAFIDDDRKKHKTTMQGITIYRPKYLERLIKKHCISTVLLAVP   74 (141)
T ss_dssp             CCEEEEEECC-SHHHHHHHHHHHHSS-SEEEEEEECSCGGGTTCEETTEEEECGGGHHHHHHHHTCCEEEECCT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCC-CcEEEEEEECCcccCCCEecCeEEECHHHHHHHHHHCCCCEEEEeCC
Confidence            4679999998 678999999999887 799999974221              456788888899988888654

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=95.01  E-value=0.024  Score=56.18  Aligned_cols=36  Identities=36%  Similarity=0.601  Sum_probs=31.2

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        74 ~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      ..+.||+|+|+||.+|..-++++.+||+ |+|+.|.+
T Consensus        17 M~~~kVaIvGAtG~vG~ell~lL~~hp~-~el~~l~a   52 (381)
T 3hsk_A           17 MSVKKAGVLGATGSVGQRFILLLSKHPE-FEIHALGA   52 (381)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCSS-EEEEEEEE
T ss_pred             CCccEEEEECCCChHHHHHHHHHHcCCC-ceEEEeec
Confidence            4457899999999999999999999975 89998853

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=95.01  E-value=0.18  Score=44.08  Aligned_cols=66  Identities=15%  Similarity=0.152  Sum_probs=43.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC--CHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS--NITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~--Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+...+  ..+.+.+++++..++...+ .|-.+.+.+++.
T Consensus         5 ~~~vlItGasggiG~~~a~~l~~~--G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   73 (247)
T 2hq1_A            5 GKTAIVTGSSRGLGKAIAWKLGNM--GANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENM   73 (247)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHH
T ss_pred             CcEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            368999999999999999998876  57888774332  3445555555555554443 454444445443

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=95.01  E-value=0.02  Score=54.12  Aligned_cols=36  Identities=19%  Similarity=0.361  Sum_probs=31.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS  112 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~  112 (369)
                      +.||+|.|+||-+|+..++.+.++|+ ++|+++...+
T Consensus         7 mikV~V~Ga~G~MG~~i~~~l~~~~~-~eLv~~~d~~   42 (272)
T 4f3y_A            7 SMKIAIAGASGRMGRMLIEAVLAAPD-ATLVGALDRT   42 (272)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHHCTT-EEEEEEBCCT
T ss_pred             ccEEEEECCCCHHHHHHHHHHHhCCC-CEEEEEEEec
Confidence            57999999999999999999998864 9999987654

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=94.92  E-value=0.044  Score=51.65  Aligned_cols=53  Identities=13%  Similarity=0.156  Sum_probs=41.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC-HHHHHHHHHhhCCCEEEE
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN-ITLLADQVKRFKPQVVAV  131 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~N-v~lL~eQ~~~FkP~~V~v  131 (369)
                      .+|.|.|++|.||..++.+.+..  ..+|++++...+ .+...+.++++..+++.-
T Consensus       169 ~~VlV~Ga~G~vG~~aiqlak~~--Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~  222 (364)
T 1gu7_A          169 DWFIQNGGTSAVGKYASQIGKLL--NFNSISVIRDRPNLDEVVASLKELGATQVIT  222 (364)
T ss_dssp             CEEEESCTTSHHHHHHHHHHHHH--TCEEEEEECCCTTHHHHHHHHHHHTCSEEEE
T ss_pred             cEEEECCCCcHHHHHHHHHHHHC--CCEEEEEecCccccHHHHHHHHhcCCeEEEe
Confidence            78999999999999999999976  578888875544 244455668888887654

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=94.88  E-value=0.23  Score=45.11  Aligned_cols=83  Identities=14%  Similarity=0.091  Sum_probs=55.2

Q ss_pred             CeeEEEEecCCh--HhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceE
Q 017567           76 PKPISVLGSTGS--IGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI  153 (369)
Q Consensus        76 ~kkI~ILGSTGS--IGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v  153 (369)
                      .|++.|.|+||+  ||..+.+-+.+.  .++|+.+.-+..-+.+.+...++..-.+...|-.+.+.+++.+.        
T Consensus        26 ~k~vlVTGasg~~GIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~--------   95 (280)
T 3nrc_A           26 GKKILITGLLSNKSIAYGIAKAMHRE--GAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFV--------   95 (280)
T ss_dssp             TCEEEECCCCSTTCHHHHHHHHHHHT--TCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHH--------
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHc--CCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHH--------
Confidence            378999999988  999999888876  57787776555456666666666543444456555555555432        


Q ss_pred             EecHHHHHHHhcCCCCCEEEEe
Q 017567          154 LAGEQGVIEAARHPDAVTVVTG  175 (369)
Q Consensus       154 ~~G~~gl~~~~~~~~~D~Vv~A  175 (369)
                           .+.+  ....+|+||+.
T Consensus        96 -----~~~~--~~g~id~li~n  110 (280)
T 3nrc_A           96 -----ELGK--VWDGLDAIVHS  110 (280)
T ss_dssp             -----HHHH--HCSSCCEEEEC
T ss_pred             -----HHHH--HcCCCCEEEEC
Confidence                 1111  23468999986

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=94.86  E-value=0.019  Score=56.16  Aligned_cols=38  Identities=21%  Similarity=0.430  Sum_probs=33.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNI  114 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv  114 (369)
                      +.||+|+|+||.+|..-++++.+||+ |+|+.|+..++.
T Consensus         7 ~~kVaIvGATGyvG~eLlrlL~~hP~-~el~~l~S~~sa   44 (359)
T 4dpk_A            7 TLKAAILGATGLVGIEYVRMLSNHPY-IKPAYLAGKGSV   44 (359)
T ss_dssp             CEEEEETTTTSTTHHHHHHHHTTCSS-EEEEEEEESTTT
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCC-ceEEEEECchhc
Confidence            45899999999999999999999975 899999766553

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=94.86  E-value=0.019  Score=56.16  Aligned_cols=38  Identities=21%  Similarity=0.430  Sum_probs=33.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNI  114 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv  114 (369)
                      +.||+|+|+||.+|..-++++.+||+ |+|+.|+..++.
T Consensus         7 ~~kVaIvGATGyvG~eLlrlL~~hP~-~el~~l~S~~sa   44 (359)
T 4dpl_A            7 TLKAAILGATGLVGIEYVRMLSNHPY-IKPAYLAGKGSV   44 (359)
T ss_dssp             CEEEEETTTTSTTHHHHHHHHTTCSS-EEEEEEEESTTT
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCC-ceEEEEECchhc
Confidence            45899999999999999999999975 899999766553

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=94.79  E-value=0.21  Score=44.33  Aligned_cols=64  Identities=16%  Similarity=0.118  Sum_probs=47.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+  .+|-+.+.+.++++..+...+ .|-.+.+.+++.
T Consensus         9 ~k~vlITGas~gIG~~~a~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   73 (261)
T 3n74_A            9 GKVALITGAGSGFGEGMAKRFAKG--GAKVVIV--DRDKAGAERVAGEIGDAALAVAADISKEADVDAA   73 (261)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEE--cCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHH
Confidence            468999999999999999988876  5777765  477888888888887665554 444444444443

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=94.78  E-value=0.22  Score=44.30  Aligned_cols=64  Identities=13%  Similarity=0.124  Sum_probs=43.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCC--CEE-EEcCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKP--QVV-AVRNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP--~~V-~v~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||....+-+.+.  .++|+.+  .++.+.+.+..+++..  +.. ...|-.+.+.+++.
T Consensus        16 ~k~vlITGasggiG~~~a~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   82 (278)
T 2bgk_A           16 DKVAIITGGAGGIGETTAKLFVRY--GAKVVIA--DIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNL   82 (278)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEE--cCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHH
Confidence            468999999999999999988876  5788776  4566666666666643  222 23454444445443

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=94.77  E-value=0.28  Score=43.97  Aligned_cols=66  Identities=23%  Similarity=0.133  Sum_probs=45.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec-CCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-SNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag-~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||....+-+.+.  .++|+.+.-. ...+.+.+.++++..+...+ .|-.+.+.+++.
T Consensus        34 ~k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~  101 (279)
T 3ctm_A           34 GKVASVTGSSGGIGWAVAEAYAQA--GADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEET  101 (279)
T ss_dssp             TCEEEETTTTSSHHHHHHHHHHHH--TCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHH
Confidence            468999999999999999988875  5788877543 23566666666665554333 454445555544

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=94.73  E-value=0.064  Score=50.53  Aligned_cols=91  Identities=23%  Similarity=0.328  Sum_probs=57.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      -++|.|.|+||.||..++.+.+..  ..+|++....  -+++ +.++++..+.+.-.+++..+.++              
T Consensus       160 g~~VlV~Gasg~iG~~~~~~a~~~--Ga~Vi~~~~~--~~~~-~~~~~~ga~~v~~~~~~~~~~v~--------------  220 (342)
T 4eye_A          160 GETVLVLGAAGGIGTAAIQIAKGM--GAKVIAVVNR--TAAT-EFVKSVGADIVLPLEEGWAKAVR--------------  220 (342)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESS--GGGH-HHHHHHTCSEEEESSTTHHHHHH--------------
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCC--HHHH-HHHHhcCCcEEecCchhHHHHHH--------------
Confidence            368999999999999999999986  5688887642  2333 45667787777644422222222              


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcC
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~g  192 (369)
                            ++.....+|+|+++..+ ..+...+.+++.|
T Consensus       221 ------~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~  250 (342)
T 4eye_A          221 ------EATGGAGVDMVVDPIGG-PAFDDAVRTLASE  250 (342)
T ss_dssp             ------HHTTTSCEEEEEESCC---CHHHHHHTEEEE
T ss_pred             ------HHhCCCCceEEEECCch-hHHHHHHHhhcCC
Confidence                  22323358999998654 4444444444443

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=94.71  E-value=0.033  Score=53.92  Aligned_cols=37  Identities=22%  Similarity=0.387  Sum_probs=32.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN  113 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~N  113 (369)
                      +.||+|+|+||-||+..++.+.++| .++|++++..++
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p-~~elv~v~s~~~   40 (345)
T 2ozp_A            4 KKTLSIVGASGYAGGEFLRLALSHP-YLEVKQVTSRRF   40 (345)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCT-TEEEEEEBCSTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCC-CcEEEEEECchh
Confidence            4689999999999999999999986 599999876443

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=94.69  E-value=0.2  Score=45.39  Aligned_cols=33  Identities=21%  Similarity=0.332  Sum_probs=29.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (369)
                      |+|.|+|+||+||...++-+.+.  .++|++++-.
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~   35 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKND--GNTPIILTRS   35 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhC--CCEEEEEeCC
Confidence            68999999999999999999876  5789998754

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=94.69  E-value=0.21  Score=45.20  Aligned_cols=64  Identities=28%  Similarity=0.387  Sum_probs=46.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+  .+|.+.+.+..+++..+...+ .|-.+.+.+++.
T Consensus         6 ~k~vlITGas~gIG~aia~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   70 (263)
T 2a4k_A            6 GKTILVTGAASGIGRAALDLFARE--GASLVAV--DREERLLAEAVAALEAEAIAVVADVSDPKAVEAV   70 (263)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHH
Confidence            368999999999999999998876  5777765  367788888877776554433 454555555543

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=94.62  E-value=0.036  Score=53.45  Aligned_cols=89  Identities=17%  Similarity=0.168  Sum_probs=56.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCC-CceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHE-DKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~p-d~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      +.||+|+|+||-||+..++.+.+++ ..++|++++..++..+           .+.+..               ..+.+ 
T Consensus         3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~-----------~~~~~~---------------~~i~~-   55 (336)
T 2r00_A            3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGK-----------TYRFNG---------------KTVRV-   55 (336)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTC-----------EEEETT---------------EEEEE-
T ss_pred             ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCC-----------ceeecC---------------ceeEE-
Confidence            4689999999999999999999885 5699999986543311           111110               00111 


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCce
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~i  195 (369)
                      ...+ . +..  .++|+|+.+......-+-.-.++++|..+
T Consensus        56 ~~~~-~-~~~--~~vDvVf~a~g~~~s~~~a~~~~~~G~~v   92 (336)
T 2r00_A           56 QNVE-E-FDW--SQVHIALFSAGGELSAKWAPIAAEAGVVV   92 (336)
T ss_dssp             EEGG-G-CCG--GGCSEEEECSCHHHHHHHHHHHHHTTCEE
T ss_pred             ecCC-h-HHh--cCCCEEEECCCchHHHHHHHHHHHcCCEE
Confidence            1111 0 111  25899999977776666666677888643

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=94.61  E-value=0.12  Score=45.57  Aligned_cols=64  Identities=14%  Similarity=0.115  Sum_probs=42.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.-  |.+.+.+..+++..+...+ .|-.+.+.+++.
T Consensus        12 ~k~vlVTGasggiG~~~a~~l~~~--G~~V~~~~r--~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   76 (265)
T 2o23_A           12 GLVAVITGGASGLGLATAERLVGQ--GASAVLLDL--PNSGGEAQAKKLGNNCVFAPADVTSEKDVQTA   76 (265)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEEC--TTSSHHHHHHHHCTTEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeC--CcHhHHHHHHHhCCceEEEEcCCCCHHHHHHH
Confidence            368999999999999999998876  577877653  3344555555555554433 444444444443

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=94.60  E-value=0.17  Score=46.02  Aligned_cols=81  Identities=19%  Similarity=0.270  Sum_probs=50.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH---HHHhhCCCEEEE-cCchhHHHHHHHHhcCCCCc
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD---QVKRFKPQVVAV-RNESLLDEIKEALANVEEKP  151 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~e---Q~~~FkP~~V~v-~de~~~~~l~~~l~~~~~~~  151 (369)
                      .|+|.|.|+||.||..+.+-+.+.  .++|+++  .+|.+.+.+   ++++..++...+ .|-.+.+.+++.+.      
T Consensus        44 ~k~vlITGasggIG~~la~~L~~~--G~~V~~~--~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~------  113 (285)
T 2c07_A           44 NKVALVTGAGRGIGREIAKMLAKS--VSHVICI--SRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVIN------  113 (285)
T ss_dssp             SCEEEEESTTSHHHHHHHHHHTTT--SSEEEEE--ESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHH------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHc--CCEEEEE--cCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHH------
Confidence            368999999999999999988875  5788773  345555544   344444444333 45444445554331      


Q ss_pred             eEEecHHHHHHHhcCCCCCEEEEe
Q 017567          152 EILAGEQGVIEAARHPDAVTVVTG  175 (369)
Q Consensus       152 ~v~~G~~gl~~~~~~~~~D~Vv~A  175 (369)
                             .+.  .....+|+||+.
T Consensus       114 -------~~~--~~~~~id~li~~  128 (285)
T 2c07_A          114 -------KIL--TEHKNVDILVNN  128 (285)
T ss_dssp             -------HHH--HHCSCCCEEEEC
T ss_pred             -------HHH--HhcCCCCEEEEC
Confidence                   111  123468999886

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=94.59  E-value=0.098  Score=48.74  Aligned_cols=91  Identities=10%  Similarity=0.088  Sum_probs=58.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCc-hhHHHHHHHHhcCCCCceEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNE-SLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de-~~~~~l~~~l~~~~~~~~v~  154 (369)
                      .++|.|.|++|.||..+..+.+..  ..+|++..  +|-+++ +.++++..+.+.-.++ +..+.               
T Consensus       146 g~~vlV~Ga~ggiG~~~~~~a~~~--G~~Vi~~~--~~~~~~-~~~~~~g~~~~~d~~~~~~~~~---------------  205 (333)
T 1wly_A          146 GDYVLIHAAAGGMGHIMVPWARHL--GATVIGTV--STEEKA-ETARKLGCHHTINYSTQDFAEV---------------  205 (333)
T ss_dssp             TCEEEETTTTSTTHHHHHHHHHHT--TCEEEEEE--SSHHHH-HHHHHHTCSEEEETTTSCHHHH---------------
T ss_pred             CCEEEEECCccHHHHHHHHHHHHC--CCEEEEEe--CCHHHH-HHHHHcCCCEEEECCCHHHHHH---------------
Confidence            468999999999999999999986  46787765  344444 3456677776543222 21222               


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcC
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~g  192 (369)
                           +.+......+|+|+++..| ..+.-.+.+++.|
T Consensus       206 -----i~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~  237 (333)
T 1wly_A          206 -----VREITGGKGVDVVYDSIGK-DTLQKSLDCLRPR  237 (333)
T ss_dssp             -----HHHHHTTCCEEEEEECSCT-TTHHHHHHTEEEE
T ss_pred             -----HHHHhCCCCCeEEEECCcH-HHHHHHHHhhccC
Confidence                 2233323368999998655 5555555555444

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=94.58  E-value=0.19  Score=44.30  Aligned_cols=64  Identities=17%  Similarity=0.231  Sum_probs=41.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHH---HHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLA---DQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~---eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|+|.|.|+||.||....+-+.+.  .++|+.+.  +|.+.+.   +.+++..++...+ .|-.+.+.+++.
T Consensus        13 ~k~vlItGasggiG~~la~~l~~~--G~~V~~~~--r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~   80 (260)
T 3awd_A           13 NRVAIVTGGAQNIGLACVTALAEA--GARVIIAD--LDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNA   80 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHH
Confidence            368999999999999999998876  57887765  4444443   3444444444333 444444444443

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=94.50  E-value=0.088  Score=45.05  Aligned_cols=50  Identities=16%  Similarity=0.228  Sum_probs=36.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVA  130 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~  130 (369)
                      .++|.|.|++|.||..+....+..  ..+|+++.  +|-+++ +.++++..+.+.
T Consensus        39 g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~--~~~~~~-~~~~~~g~~~~~   88 (198)
T 1pqw_A           39 GERVLIHSATGGVGMAAVSIAKMI--GARIYTTA--GSDAKR-EMLSRLGVEYVG   88 (198)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHH--TCEEEEEE--SSHHHH-HHHHTTCCSEEE
T ss_pred             CCEEEEeeCCChHHHHHHHHHHHc--CCEEEEEe--CCHHHH-HHHHHcCCCEEe
Confidence            368999999999999999999876  46787754  454544 445667666554

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=94.50  E-value=0.12  Score=46.55  Aligned_cols=34  Identities=18%  Similarity=0.260  Sum_probs=29.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (369)
                      +++|.|+|+||.||...++-+.+.  .++|++++-.
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~   37 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISL--GHPTYVLFRP   37 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhC--CCcEEEEECC
Confidence            568999999999999999998875  4889888644

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=94.49  E-value=0.14  Score=46.96  Aligned_cols=35  Identities=26%  Similarity=0.350  Sum_probs=29.8

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (369)
                      .+|+|.|.|+||+||...++-+.+.  .++|+++.-.
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~   58 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKL--NQVVIGLDNF   58 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECC
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCC
Confidence            3578999999999999999988875  5889998753

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=94.47  E-value=0.24  Score=43.34  Aligned_cols=63  Identities=16%  Similarity=0.153  Sum_probs=41.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh----CCCEEE-EcCchhHHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF----KPQVVA-VRNESLLDEIKEA  143 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F----kP~~V~-v~de~~~~~l~~~  143 (369)
                      |++.|.|+||.||....+-+.+.  .++|+.+.  +|.+.+.+..++.    .++... ..|-.+.+.+++.
T Consensus         3 k~vlItGasggiG~~~a~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   70 (250)
T 2cfc_A            3 RVAIVTGASSGNGLAIATRFLAR--GDRVAALD--LSAETLEETARTHWHAYADKVLRVRADVADEGDVNAA   70 (250)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Confidence            67999999999999999988876  57777754  5666665555444    333332 3454444455443

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=94.47  E-value=0.029  Score=54.81  Aligned_cols=40  Identities=25%  Similarity=0.488  Sum_probs=34.0

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCC----ceEEEEEeecCCH
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHED----KFRVVALAAGSNI  114 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd----~F~VvaLaag~Nv  114 (369)
                      .++||+|+|+||-||+..++.+.++|.    .++|++++..++.
T Consensus         8 ~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~a   51 (352)
T 2nqt_A            8 NATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSA   51 (352)
T ss_dssp             SCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCT
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcC
Confidence            356899999999999999999999873    6999999765553

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=94.46  E-value=0.36  Score=43.01  Aligned_cols=84  Identities=18%  Similarity=0.190  Sum_probs=51.5

Q ss_pred             CeeEEEEecCCh-HhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---C-CCEEEE-cCchhHHHHHHHHhcCCC
Q 017567           76 PKPISVLGSTGS-IGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---K-PQVVAV-RNESLLDEIKEALANVEE  149 (369)
Q Consensus        76 ~kkI~ILGSTGS-IGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F---k-P~~V~v-~de~~~~~l~~~l~~~~~  149 (369)
                      .|++.|.|+||| ||..+.+-+.+.  .++|+.+.  +|.+.+.+..+++   . ++...+ .|-.+.+.+++.+.    
T Consensus        22 ~k~vlITGasg~GIG~~~a~~l~~~--G~~V~~~~--r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~----   93 (266)
T 3o38_A           22 GKVVLVTAAAGTGIGSTTARRALLE--GADVVISD--YHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALIT----   93 (266)
T ss_dssp             TCEEEESSCSSSSHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHH----
T ss_pred             CCEEEEECCCCCchHHHHHHHHHHC--CCEEEEec--CCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHH----
Confidence            468999999997 999999988876  57777653  5566555555444   2 333333 45455555554432    


Q ss_pred             CceEEecHHHHHHHhcCCCCCEEEEeccCc
Q 017567          150 KPEILAGEQGVIEAARHPDAVTVVTGIVGC  179 (369)
Q Consensus       150 ~~~v~~G~~gl~~~~~~~~~D~Vv~AIvG~  179 (369)
                               .+.+  +...+|+||+. +|.
T Consensus        94 ---------~~~~--~~g~id~li~~-Ag~  111 (266)
T 3o38_A           94 ---------QTVE--KAGRLDVLVNN-AGL  111 (266)
T ss_dssp             ---------HHHH--HHSCCCEEEEC-CCC
T ss_pred             ---------HHHH--HhCCCcEEEEC-CCc
Confidence                     1111  12368999986 443

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=94.44  E-value=0.22  Score=44.31  Aligned_cols=65  Identities=22%  Similarity=0.202  Sum_probs=43.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.-... +.+.+++++...+...+ .|-.+.+.+++.
T Consensus         4 ~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~-~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~   69 (255)
T 2q2v_A            4 GKTALVTGSTSGIGLGIAQVLARA--GANIVLNGFGDP-APALAEIARHGVKAVHHPADLSDVAQIEAL   69 (255)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHT--TCEEEEECSSCC-HHHHHHHHTTSCCEEEECCCTTSHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCch-HHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence            368999999999999999998875  578887654444 55556665555554443 444444444443

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=94.43  E-value=0.37  Score=43.55  Aligned_cols=82  Identities=12%  Similarity=0.174  Sum_probs=51.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh----CCCEEEE-cCchhHHHHHHHHhcCCCC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF----KPQVVAV-RNESLLDEIKEALANVEEK  150 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F----kP~~V~v-~de~~~~~l~~~l~~~~~~  150 (369)
                      .|++.|.|+||.||....+-+.+.  .++|+++.  +|.+.+.+..+++    .++...+ .|-.+.+.+++.+.     
T Consensus        26 ~k~vlITGasggiG~~la~~L~~~--G~~V~~~~--r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   96 (302)
T 1w6u_A           26 GKVAFITGGGTGLGKGMTTLLSSL--GAQCVIAS--RKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVS-----   96 (302)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHH-----
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHH-----
Confidence            368999999999999999998876  57777654  5566655544443    4444333 45444555554432     


Q ss_pred             ceEEecHHHHHHHhcCCCCCEEEEec
Q 017567          151 PEILAGEQGVIEAARHPDAVTVVTGI  176 (369)
Q Consensus       151 ~~v~~G~~gl~~~~~~~~~D~Vv~AI  176 (369)
                              .+.+  ....+|+||+..
T Consensus        97 --------~~~~--~~g~id~li~~A  112 (302)
T 1w6u_A           97 --------ELIK--VAGHPNIVINNA  112 (302)
T ss_dssp             --------HHHH--HTCSCSEEEECC
T ss_pred             --------HHHH--HcCCCCEEEECC
Confidence                    1111  234689988864

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=94.41  E-value=0.27  Score=43.72  Aligned_cols=80  Identities=19%  Similarity=0.177  Sum_probs=53.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.  +|.+.+.+..++.. -.+...|-.+.+.+++.+.          
T Consensus         5 ~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~----------   69 (245)
T 1uls_A            5 DKAVLITGAAHGIGRATLELFAKE--GARLVACD--IEEGPLREAAEAVG-AHPVVMDVADPASVERGFA----------   69 (245)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHTTT-CEEEECCTTCHHHHHHHHH----------
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHcC-CEEEEecCCCHHHHHHHHH----------
Confidence            368999999999999999988875  67887653  57788877776664 2333355555555554432          


Q ss_pred             cHHHHHHHhcCCCCCEEEEe
Q 017567          156 GEQGVIEAARHPDAVTVVTG  175 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~A  175 (369)
                         .+.+-  ...+|+||+.
T Consensus        70 ---~~~~~--~g~id~lvn~   84 (245)
T 1uls_A           70 ---EALAH--LGRLDGVVHY   84 (245)
T ss_dssp             ---HHHHH--HSSCCEEEEC
T ss_pred             ---HHHHH--cCCCCEEEEC
Confidence               11111  2358999986

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=94.41  E-value=0.13  Score=46.22  Aligned_cols=64  Identities=17%  Similarity=0.170  Sum_probs=44.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+++.  +|.+.+.+...++..+...+ .|-.+.+.+++.
T Consensus         5 ~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~   69 (281)
T 3m1a_A            5 AKVWLVTGASSGFGRAIAEAAVAA--GDTVIGTA--RRTEALDDLVAAYPDRAEAISLDVTDGERIDVV   69 (281)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEE--SSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHH
T ss_pred             CcEEEEECCCChHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHhccCCceEEEeeCCCHHHHHHH
Confidence            478999999999999999988875  57887654  45666777777776555443 344444444443

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=94.38  E-value=0.041  Score=53.20  Aligned_cols=34  Identities=32%  Similarity=0.592  Sum_probs=30.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      +.||+|+|+||.||+..++.+.++|+ |+|+++.+
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~-~elvai~~   37 (350)
T 2ep5_A            4 KIKVSLLGSTGMVGQKMVKMLAKHPY-LELVKVSA   37 (350)
T ss_dssp             CEEEEEESCSSHHHHHHHHHHTTCSS-EEEEEEEC
T ss_pred             CcEEEEECcCCHHHHHHHHHHHhCCC-cEEEEEec
Confidence            46899999999999999999999865 99999963

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=94.37  E-value=0.26  Score=44.03  Aligned_cols=45  Identities=18%  Similarity=0.183  Sum_probs=34.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|.+.+.+..+++
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~   51 (260)
T 2z1n_A            7 GKLAVVTAGSSGLGFASALELARN--GARLLLFS--RNREKLEAAASRI   51 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHH
Confidence            368999999999999999998876  57777653  5666665555443

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=94.33  E-value=0.26  Score=42.80  Aligned_cols=65  Identities=15%  Similarity=0.115  Sum_probs=41.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH---HHHhhCCCEE--EEcCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD---QVKRFKPQVV--AVRNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~e---Q~~~FkP~~V--~v~de~~~~~l~~~  143 (369)
                      +|+|.|.|+||.||..+.+-+.+.  .++|+++.. +|.+.+.+   ++++...+..  ...|-.+.+.+++.
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~--G~~v~~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   70 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAED--GFALAIHYG-QNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATAL   70 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTT--TCEEEEEES-SCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcC-CCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHH
Confidence            368999999999999999988875  578887643 45555443   3333344433  33455555555543

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=94.32  E-value=0.25  Score=44.02  Aligned_cols=64  Identities=13%  Similarity=0.078  Sum_probs=45.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+  .+|.+.+.+..+++..+...+ .|-.+.+.+++.
T Consensus         6 ~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   70 (253)
T 1hxh_A            6 GKVALVTGGASGVGLEVVKLLLGE--GAKVAFS--DINEAAGQQLAAELGERSMFVRHDVSSEADWTLV   70 (253)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEE--CSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHH
Confidence            368999999999999999998876  5777765  467788877777765554443 444444444443

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=94.32  E-value=0.078  Score=49.38  Aligned_cols=53  Identities=17%  Similarity=0.166  Sum_probs=41.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEc
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVR  132 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~  132 (369)
                      -++|.|.|+||.||..+..+.+..  ..+|++..  +|-+++....+++..+.+.-.
T Consensus       150 g~~vlI~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~--~~~~~~~~~~~~~g~~~~~~~  202 (336)
T 4b7c_A          150 GETVVISGAAGAVGSVAGQIARLK--GCRVVGIA--GGAEKCRFLVEELGFDGAIDY  202 (336)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE--SSHHHHHHHHHTTCCSEEEET
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHcCCCEEEEC
Confidence            468999999999999999999976  56887764  456676655588888776543

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=94.32  E-value=0.26  Score=44.02  Aligned_cols=64  Identities=11%  Similarity=0.072  Sum_probs=43.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEE-EEcCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVV-AVRNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V-~v~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.  +|.+.+.+...++..+.. ...|-.+.+.+++.
T Consensus        12 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~   76 (263)
T 3ak4_A           12 GRKAIVTGGSKGIGAAIARALDKA--GATVAIAD--LDVMAAQAVVAGLENGGFAVEVDVTKRASVDAA   76 (263)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHH
Confidence            368999999999999999988875  57777653  567777777666643332 23454444444443

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=94.29  E-value=0.22  Score=45.21  Aligned_cols=66  Identities=18%  Similarity=0.210  Sum_probs=42.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC--HHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN--ITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~N--v~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.-+..  .+.+.+.+++...+...+ .|-.+.+.+++.
T Consensus        29 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   97 (283)
T 1g0o_A           29 GKVALVTGAGRGIGREMAMELGRR--GCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRM   97 (283)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHH
Confidence            368999999999999999999886  678877653321  233445555555554443 444444444443

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=94.29  E-value=0.31  Score=43.29  Aligned_cols=81  Identities=17%  Similarity=0.166  Sum_probs=53.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHHHhcCCCCceEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      +|++.|.|+||.||.....-+.+.  .++|+.+  .+|.+.+.+..+++..+...+ .|-.+.+.+++.+.         
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~---------   69 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVER--GHQVSMM--GRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFA---------   69 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHH---------
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHH---------
Confidence            478999999999999999988876  5777664  457788877777764443332 44444444544332         


Q ss_pred             ecHHHHHHHhcCCCCCEEEEe
Q 017567          155 AGEQGVIEAARHPDAVTVVTG  175 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~A  175 (369)
                          .+.+  .....|++|+.
T Consensus        70 ----~~~~--~~g~id~lvnn   84 (235)
T 3l6e_A           70 ----AAVE--WGGLPELVLHC   84 (235)
T ss_dssp             ----HHHH--HHCSCSEEEEE
T ss_pred             ----HHHH--hcCCCcEEEEC
Confidence                1111  12358999986

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=94.26  E-value=0.096  Score=48.75  Aligned_cols=90  Identities=8%  Similarity=0.099  Sum_probs=57.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCch-hHHHHHHHHhcCCCCceEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNES-LLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~-~~~~l~~~l~~~~~~~~v~  154 (369)
                      -++|.|.|++|.||..++.+.+..  ..+|++...  |-+++ +.++++..+.+.-.++. ..+.+              
T Consensus       141 g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~--~~~~~-~~~~~~Ga~~~~~~~~~~~~~~~--------------  201 (325)
T 3jyn_A          141 GEIILFHAAAGGVGSLACQWAKAL--GAKLIGTVS--SPEKA-AHAKALGAWETIDYSHEDVAKRV--------------  201 (325)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEES--SHHHH-HHHHHHTCSEEEETTTSCHHHHH--------------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEeC--CHHHH-HHHHHcCCCEEEeCCCccHHHHH--------------
Confidence            368999999999999999999976  468887653  44554 46677887776543322 22222              


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHc
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEA  191 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~  191 (369)
                            .++.....+|+|+++..+ ..+...+.+++.
T Consensus       202 ------~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~  231 (325)
T 3jyn_A          202 ------LELTDGKKCPVVYDGVGQ-DTWLTSLDSVAP  231 (325)
T ss_dssp             ------HHHTTTCCEEEEEESSCG-GGHHHHHTTEEE
T ss_pred             ------HHHhCCCCceEEEECCCh-HHHHHHHHHhcC
Confidence                  233333368999998554 444444444333

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=94.26  E-value=0.082  Score=47.85  Aligned_cols=54  Identities=11%  Similarity=0.108  Sum_probs=41.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec-----CCHHHHHHHHHhhCCCEEEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-----SNITLLADQVKRFKPQVVAV  131 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag-----~Nv~lL~eQ~~~FkP~~V~v  131 (369)
                      .|+|.|.|+||.||...++-+.+.  .++|+++.-.     .+.+.+.+..++++++.|+-
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~--g~~v~~~~r~~~~D~~d~~~~~~~~~~~~~d~vih   61 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQR--GDVELVLRTRDELNLLDSRAVHDFFASERIDQVYL   61 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTC--TTEEEECCCTTTCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhC--CCeEEEEecCccCCccCHHHHHHHHHhcCCCEEEE
Confidence            368999999999999999988765  5788886532     35566777777778888764

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=94.25  E-value=0.27  Score=44.58  Aligned_cols=64  Identities=17%  Similarity=0.147  Sum_probs=43.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+  .+|-+.+.+..++...-.+...|-.+.+.+++.
T Consensus         9 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   72 (270)
T 1yde_A            9 GKVVVVTGGGRGIGAGIVRAFVNS--GARVVIC--DKDESGGRALEQELPGAVFILCDVTQEDDVKTL   72 (270)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHH
Confidence            468999999999999999998876  5777765  357777766666654323333555555555543

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=94.25  E-value=0.094  Score=49.35  Aligned_cols=50  Identities=18%  Similarity=0.127  Sum_probs=37.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEE
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVA  130 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaag~Nv~lL~eQ~~~FkP~~V~  130 (369)
                      ++|.|.|++|.||..++...+..  .. +|++..  ++-+++....+++..+.++
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~--Ga~~Vi~~~--~~~~~~~~~~~~~g~~~~~  212 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFL--GCSRVVGIC--GTHEKCILLTSELGFDAAI  212 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHT--TCSEEEEEE--SCHHHHHHHHHTSCCSEEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHHC--CCCeEEEEe--CCHHHHHHHHHHcCCceEE
Confidence            78999999999999999999976  56 777654  4555654444447776654

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=94.24  E-value=0.34  Score=43.20  Aligned_cols=64  Identities=17%  Similarity=0.249  Sum_probs=42.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh----CCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF----KPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F----kP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.  +|.+.+.+..+++    ..+...+ .|-.+.+.+++.
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~   75 (263)
T 3ai3_A            7 GKVAVITGSSSGIGLAIAEGFAKE--GAHIVLVA--RQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAV   75 (263)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEc--CCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            368999999999999999998876  57777654  5666655544443    4444333 454444455543

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=94.23  E-value=0.14  Score=48.58  Aligned_cols=51  Identities=16%  Similarity=0.167  Sum_probs=38.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV  131 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v  131 (369)
                      .++|.|.|++|.||..++.+.+..  ..+|++..  ++-+++. .++++..+.+.-
T Consensus       171 g~~vlV~GasggiG~~~~~~a~~~--Ga~Vi~~~--~~~~~~~-~~~~~ga~~~~d  221 (351)
T 1yb5_A          171 GESVLVHGASGGVGLAACQIARAY--GLKILGTA--GTEEGQK-IVLQNGAHEVFN  221 (351)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEE--SSHHHHH-HHHHTTCSEEEE
T ss_pred             cCEEEEECCCChHHHHHHHHHHHC--CCEEEEEe--CChhHHH-HHHHcCCCEEEe
Confidence            368999999999999999999986  46787755  3445543 667787776653

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=94.22  E-value=0.19  Score=43.97  Aligned_cols=64  Identities=19%  Similarity=0.156  Sum_probs=41.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHH---HHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLA---DQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~---eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|+|.|.|+||.||....+-+.+.  .++|+++.  +|.+.+.   +.+++..++...+ .|-.+.+.+++.
T Consensus        11 ~~~vlVtGasggiG~~la~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   78 (255)
T 1fmc_A           11 GKCAIITGAGAGIGKEIAITFATA--GASVVVSD--INADAANHVVDEIQQLGGQAFACRCDITSEQELSAL   78 (255)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHTT--TCEEEEEE--SCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCccHHHHHHHHHHHHC--CCEEEEEc--CCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHH
Confidence            368999999999999999988876  57887764  4555444   3444444554333 444444444443

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=94.22  E-value=0.099  Score=49.19  Aligned_cols=93  Identities=16%  Similarity=0.199  Sum_probs=60.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      ++|.|.|++|.||..++.+.+..  ..+|++...  |-+++ +.++++..+.+.-.+++..+                  
T Consensus       152 ~~VlV~gg~G~vG~~a~qla~~~--Ga~Vi~~~~--~~~~~-~~~~~lGa~~vi~~~~~~~~------------------  208 (346)
T 3fbg_A          152 KTLLIINGAGGVGSIATQIAKAY--GLRVITTAS--RNETI-EWTKKMGADIVLNHKESLLN------------------  208 (346)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHT--TCEEEEECC--SHHHH-HHHHHHTCSEEECTTSCHHH------------------
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeC--CHHHH-HHHHhcCCcEEEECCccHHH------------------
Confidence            58999999999999999999976  468888653  44554 56677888776544332222                  


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCce
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~i  195 (369)
                        .+.++ ....+|+|+++..+-..+.-.+.+++.|=++
T Consensus       209 --~~~~~-~~~g~Dvv~d~~g~~~~~~~~~~~l~~~G~i  244 (346)
T 3fbg_A          209 --QFKTQ-GIELVDYVFCTFNTDMYYDDMIQLVKPRGHI  244 (346)
T ss_dssp             --HHHHH-TCCCEEEEEESSCHHHHHHHHHHHEEEEEEE
T ss_pred             --HHHHh-CCCCccEEEECCCchHHHHHHHHHhccCCEE
Confidence              22233 2335899999765544455555555554443

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=94.20  E-value=0.31  Score=43.94  Aligned_cols=81  Identities=21%  Similarity=0.158  Sum_probs=49.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH---HHHhhCCCEEEE-cCchhHHHHHHHHhcCCCCc
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD---QVKRFKPQVVAV-RNESLLDEIKEALANVEEKP  151 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~e---Q~~~FkP~~V~v-~de~~~~~l~~~l~~~~~~~  151 (369)
                      .|+|.|.|+||.||....+-+.+.  .++|+++.  +|.+.+.+   ++++...+...+ .|-.+.+.+++.+.      
T Consensus        31 ~k~vlITGasggIG~~la~~L~~~--G~~V~~~~--r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~------  100 (272)
T 1yb1_A           31 GEIVLITGAGHGIGRLTAYEFAKL--KSKLVLWD--INKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAK------  100 (272)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH------
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEE--cCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHH------
Confidence            468999999999999999998886  57777754  45554444   344434444333 44444444444331      


Q ss_pred             eEEecHHHHHHHhcCCCCCEEEEe
Q 017567          152 EILAGEQGVIEAARHPDAVTVVTG  175 (369)
Q Consensus       152 ~v~~G~~gl~~~~~~~~~D~Vv~A  175 (369)
                             .+.  ....++|+||+.
T Consensus       101 -------~~~--~~~g~iD~li~~  115 (272)
T 1yb1_A          101 -------KVK--AEIGDVSILVNN  115 (272)
T ss_dssp             -------HHH--HHTCCCSEEEEC
T ss_pred             -------HHH--HHCCCCcEEEEC
Confidence                   111  123468999887

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=94.16  E-value=0.28  Score=43.16  Aligned_cols=80  Identities=21%  Similarity=0.196  Sum_probs=50.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHH---HHHHHHHhhCCCEEEE-cCchhHHHHHHHHhcCCCCc
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNIT---LLADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKP  151 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~---lL~eQ~~~FkP~~V~v-~de~~~~~l~~~l~~~~~~~  151 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.  +|.+   .+.+.+++..++...+ .|-.+.+.+++.+.      
T Consensus         5 ~k~vlITGas~gIG~~~a~~l~~~--G~~v~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (247)
T 3lyl_A            5 EKVALVTGASRGIGFEVAHALASK--GATVVGTA--TSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFA------   74 (247)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEE--SSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH------
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH------
Confidence            468999999999999999988876  67777654  3444   4444555555554443 44444444444331      


Q ss_pred             eEEecHHHHHHH-hcCCCCCEEEEe
Q 017567          152 EILAGEQGVIEA-ARHPDAVTVVTG  175 (369)
Q Consensus       152 ~v~~G~~gl~~~-~~~~~~D~Vv~A  175 (369)
                                ++ .....+|+||+.
T Consensus        75 ----------~~~~~~~~id~li~~   89 (247)
T 3lyl_A           75 ----------EIKAENLAIDILVNN   89 (247)
T ss_dssp             ----------HHHHTTCCCSEEEEC
T ss_pred             ----------HHHHHcCCCCEEEEC
Confidence                      11 123468999886

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=94.14  E-value=0.097  Score=47.56  Aligned_cols=32  Identities=22%  Similarity=0.447  Sum_probs=27.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      ||+|.|.|+||+||....+-+.+.  .++|+++.
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~   32 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDE--GLSVVVVD   32 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhC--CCEEEEEe
Confidence            478999999999999999998875  58898875

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=94.14  E-value=0.089  Score=47.11  Aligned_cols=51  Identities=27%  Similarity=0.408  Sum_probs=40.1

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeec--------CCHHHHHHHHHhhCCCEEEE
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG--------SNITLLADQVKRFKPQVVAV  131 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag--------~Nv~lL~eQ~~~FkP~~V~v  131 (369)
                      +|.|.|+||.||....+-+. .  .++|+++.-.        .+.+.+.+..+..+++.|.-
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~--g~~V~~~~r~~~~~~~D~~d~~~~~~~~~~~~~d~vih   60 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-P--VGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN   60 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-T--TSEEEEECTTCSSSCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             eEEEECCCCHHHHHHHHHhh-c--CCeEEEeccccccccccCCCHHHHHHHHHhcCCCEEEE
Confidence            79999999999999998877 3  6999998632        25566777777777888764

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=94.12  E-value=0.37  Score=42.34  Aligned_cols=66  Identities=21%  Similarity=0.176  Sum_probs=41.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec-CCHH-HHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-SNIT-LLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag-~Nv~-lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|+|.|.|+||.||....+-+.+.  .++|+.+.-. ...+ .+.+..+++..+...+ .|-.+.+.+++.
T Consensus        14 ~k~vlITGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~   82 (265)
T 1h5q_A           14 NKTIIVTGGNRGIGLAFTRAVAAA--GANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKT   82 (265)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHT--TEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHH
Confidence            468999999999999999988875  6888887632 2222 2333334445554433 454444455543

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=94.12  E-value=0.12  Score=48.66  Aligned_cols=75  Identities=17%  Similarity=0.201  Sum_probs=50.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      ++|.|.|++|.||..++.+.+..  ..+|++.   .+-+++ +.++++..+.+. .+++..+.++               
T Consensus       152 ~~VlV~Ga~g~iG~~~~q~a~~~--Ga~Vi~~---~~~~~~-~~~~~lGa~~i~-~~~~~~~~~~---------------  209 (343)
T 3gaz_A          152 QTVLIQGGGGGVGHVAIQIALAR--GARVFAT---ARGSDL-EYVRDLGATPID-ASREPEDYAA---------------  209 (343)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEE---ECHHHH-HHHHHHTSEEEE-TTSCHHHHHH---------------
T ss_pred             CEEEEecCCCHHHHHHHHHHHHC--CCEEEEE---eCHHHH-HHHHHcCCCEec-cCCCHHHHHH---------------
Confidence            68999999999999999999976  5688887   244554 567888877732 3333222222               


Q ss_pred             HHHHHHHhcCCCCCEEEEeccC
Q 017567          157 EQGVIEAARHPDAVTVVTGIVG  178 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG  178 (369)
                           ++.....+|+|+++..|
T Consensus       210 -----~~~~~~g~D~vid~~g~  226 (343)
T 3gaz_A          210 -----EHTAGQGFDLVYDTLGG  226 (343)
T ss_dssp             -----HHHTTSCEEEEEESSCT
T ss_pred             -----HHhcCCCceEEEECCCc
Confidence                 22333368999997543

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=94.11  E-value=0.14  Score=48.74  Aligned_cols=97  Identities=15%  Similarity=0.181  Sum_probs=64.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      .+|.|.|++|.||..++.+.+... ..+|++...  +-+++ +.++++..+.+.-..++    +.+.             
T Consensus       173 ~~VlV~Ga~G~vG~~a~qlak~~~-g~~Vi~~~~--~~~~~-~~~~~lGad~vi~~~~~----~~~~-------------  231 (363)
T 4dvj_A          173 PAILIVGGAGGVGSIAVQIARQRT-DLTVIATAS--RPETQ-EWVKSLGAHHVIDHSKP----LAAE-------------  231 (363)
T ss_dssp             EEEEEESTTSHHHHHHHHHHHHHC-CSEEEEECS--SHHHH-HHHHHTTCSEEECTTSC----HHHH-------------
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhc-CCEEEEEeC--CHHHH-HHHHHcCCCEEEeCCCC----HHHH-------------
Confidence            589999999999999999998632 357887653  34444 45678888877543322    2221             


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeee
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALA  198 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLA  198 (369)
                         +.++ ....+|+|+++..|-..+.-.+.+++.|-++.+.
T Consensus       232 ---v~~~-~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~  269 (363)
T 4dvj_A          232 ---VAAL-GLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLI  269 (363)
T ss_dssp             ---HHTT-CSCCEEEEEECSCHHHHHHHHHHHSCTTCEEEEC
T ss_pred             ---HHHh-cCCCceEEEECCCchhhHHHHHHHhcCCCEEEEE
Confidence               1222 2235899999866555666677777777666554

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=94.09  E-value=0.29  Score=44.44  Aligned_cols=63  Identities=22%  Similarity=0.182  Sum_probs=46.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKE  142 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~  142 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+  .+|.+.+.+.++++..+...+ .|-.+.+.+++
T Consensus        27 gk~vlVTGas~gIG~aia~~la~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~   90 (266)
T 3grp_A           27 GRKALVTGATGGIGEAIARCFHAQ--GAIVGLH--GTREDKLKEIAADLGKDVFVFSANLSDRKSIKQ   90 (266)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHhCCceEEEEeecCCHHHHHH
Confidence            368999999999999999988876  5677654  467888888888887766554 44444444444

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=94.08  E-value=0.33  Score=42.46  Aligned_cols=65  Identities=18%  Similarity=0.129  Sum_probs=40.9

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHh-CCCceEEEEEeecCCHHHHHHHHHhh---CCCE-EEEcCchhHHHHHHH
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAE-HEDKFRVVALAAGSNITLLADQVKRF---KPQV-VAVRNESLLDEIKEA  143 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~-~pd~F~VvaLaag~Nv~lL~eQ~~~F---kP~~-V~v~de~~~~~l~~~  143 (369)
                      ..|+|.|.|+||.||..+.+-+.+ .  .++|+.+.  +|.+.+.+..+++   ..+. +...|-.+.+.+++.
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~--g~~V~~~~--r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~   72 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLF--SGDVVLTA--RDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRAL   72 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHS--SSEEEEEE--SSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhc--CCeEEEEe--CChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHH
Confidence            357899999999999999998887 5  46777654  4555544443333   3332 233454444445443

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=94.07  E-value=0.25  Score=45.19  Aligned_cols=81  Identities=14%  Similarity=0.224  Sum_probs=55.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHHHhcCCCCceEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      .|.+.|.|+||.||..+.+-+.+.  .++|+.+  .+|.+.+.+.++++..+...+ .|-.+.+.+++.+.         
T Consensus        28 ~k~~lVTGas~GIG~aia~~la~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~---------   94 (272)
T 4dyv_A           28 KKIAIVTGAGSGVGRAVAVALAGA--GYGVALA--GRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFT---------   94 (272)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHH---------
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHH---------
Confidence            467899999999999999988876  5777664  467888888888886655444 44444444444332         


Q ss_pred             ecHHHHHHHhcCCCCCEEEEe
Q 017567          155 AGEQGVIEAARHPDAVTVVTG  175 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~A  175 (369)
                          .+.+  ....+|++|+.
T Consensus        95 ----~~~~--~~g~iD~lVnn  109 (272)
T 4dyv_A           95 ----ATVE--KFGRVDVLFNN  109 (272)
T ss_dssp             ----HHHH--HHSCCCEEEEC
T ss_pred             ----HHHH--HcCCCCEEEEC
Confidence                1111  12368999986

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=94.07  E-value=0.28  Score=43.58  Aligned_cols=64  Identities=13%  Similarity=0.118  Sum_probs=43.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCH-HHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNI-TLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv-~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.  +|. +.+.++++++..+...+ .|-.+.+.+++.
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   72 (249)
T 2ew8_A            7 DKLAVITGGANGIGRAIAERFAVE--GADIAIAD--LVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAF   72 (249)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEc--CCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHH
Confidence            368999999999999999998876  57777754  344 66666666666554443 444444444443

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=94.05  E-value=0.33  Score=43.42  Aligned_cols=80  Identities=18%  Similarity=0.178  Sum_probs=53.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      |++.|.|+||.||..+..-+.+.  .++|+.+  .+|.+.+.+...++..+...+ .|-.+.+.+++.+...        
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~--------   68 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQ--GHKVIAT--GRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASL--------   68 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTS--------
T ss_pred             CEEEEECCCChHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHH--------
Confidence            57899999999999999998876  5777765  457788877777776554333 4544444444433211        


Q ss_pred             cHHHHHHHhcCCCCCEEEEe
Q 017567          156 GEQGVIEAARHPDAVTVVTG  175 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~A  175 (369)
                             ......+|++|+.
T Consensus        69 -------~~~~g~iD~lvnn   81 (248)
T 3asu_A           69 -------PAEWCNIDILVNN   81 (248)
T ss_dssp             -------CTTTCCCCEEEEC
T ss_pred             -------HHhCCCCCEEEEC
Confidence                   0112368999986

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=94.05  E-value=0.34  Score=43.27  Aligned_cols=64  Identities=11%  Similarity=0.082  Sum_probs=44.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.  +|.+.+.+..+++..+...+ .|-.+.+.+++.
T Consensus         5 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   69 (254)
T 1hdc_A            5 GKTVIITGGARGLGAEAARQAVAA--GARVVLAD--VLDEEGAATARELGDAARYQHLDVTIEEDWQRV   69 (254)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHhCCceeEEEecCCCHHHHHHH
Confidence            468999999999999999998876  57777653  56777777777664444333 444444444443

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=94.05  E-value=0.046  Score=52.75  Aligned_cols=33  Identities=42%  Similarity=0.738  Sum_probs=30.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      .||+|+|+||-||+..++.+.++| .|+|+++..
T Consensus         9 ~kV~IiGAtG~iG~~llr~L~~~p-~~ev~~i~~   41 (354)
T 1ys4_A            9 IKVGVLGATGSVGQRFVQLLADHP-MFELTALAA   41 (354)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCS-SEEEEEEEE
T ss_pred             ceEEEECcCCHHHHHHHHHHhcCC-CCEEEEEEc
Confidence            589999999999999999999986 599999974

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=94.02  E-value=0.048  Score=49.36  Aligned_cols=32  Identities=25%  Similarity=0.322  Sum_probs=27.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      +||.|.|+||+||+...+-+.+.  .++|++|+=
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~--G~~V~~l~R   32 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNAR--GHEVTLVSR   32 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEES
T ss_pred             CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEEC
Confidence            36999999999999999888764  689999963

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=93.99  E-value=0.42  Score=41.57  Aligned_cols=64  Identities=20%  Similarity=0.134  Sum_probs=40.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh----hCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR----FKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~----FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+++.  +|.+.+.+..++    +..+...+ .|-.+.+.+++.
T Consensus         7 ~~~vlVtGasggiG~~la~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   75 (248)
T 2pnf_A            7 GKVSLVTGSTRGIGRAIAEKLASA--GSTVIITG--TSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKA   75 (248)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEE--SSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEe--CChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHH
Confidence            368999999999999999988875  57787764  455555443333    34444333 344444444443

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=93.96  E-value=0.29  Score=42.69  Aligned_cols=64  Identities=16%  Similarity=0.150  Sum_probs=42.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh----hCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR----FKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~----FkP~~V~v-~de~~~~~l~~~  143 (369)
                      +|++.|.|+||.||..+.+-+.+.  .++|+.+.  +|.+.+.+.+++    ...+...+ .|-.+.+.+++.
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   70 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARD--GYALALGA--RSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEF   70 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHH
Confidence            478999999999999999998876  57766543  566666555443    34454443 454555555544

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=93.95  E-value=0.36  Score=42.21  Aligned_cols=64  Identities=17%  Similarity=0.086  Sum_probs=43.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC--CCEE-EEcCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK--PQVV-AVRNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~Fk--P~~V-~v~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||....+-+.+.  .++|+.+.  +|.+.+.+..++.+  .+.. ...|-.+.+.+++.
T Consensus         6 ~k~vlVtGasggiG~~~a~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   72 (251)
T 1zk4_A            6 GKVAIITGGTLGIGLAIATKFVEE--GAKVMITG--RHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKL   72 (251)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHH
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHH
Confidence            468999999999999999988876  57777654  56677766666554  2332 22444444444443

>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*

Probab=93.93  E-value=0.091  Score=51.71  Aligned_cols=114  Identities=17%  Similarity=0.153  Sum_probs=63.9

Q ss_pred             ccCCCCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee-cCCHHHHHHHHH--hhCCCE---EEEcCchhHHHHHH
Q 017567           69 FRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA-GSNITLLADQVK--RFKPQV---VAVRNESLLDEIKE  142 (369)
Q Consensus        69 ~~~~~~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa-g~Nv~lL~eQ~~--~FkP~~---V~v~de~~~~~l~~  142 (369)
                      +|.+...+.||+|.|+ |-||+..++.+.++| +|+|+++.. ..+.+.++...+  .-.|++   +-..+..       
T Consensus        10 ~~~~~~~~ikVgI~G~-G~iGr~llR~l~~~p-~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~-------   80 (354)
T 3cps_A           10 GRENLYFQGTLGINGF-GRIGRLVLRACMERN-DITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKD-------   80 (354)
T ss_dssp             --------CEEEEECC-SHHHHHHHHHHHTCS-SCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-C-------
T ss_pred             cccCcCcceEEEEECC-CHHHHHHHHHHHcCC-CeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCE-------
Confidence            3455566779999999 999999999999886 599999997 778886665432  223332   2111100       


Q ss_pred             HHhcCCCCceEEecHHHHHHHh-cCCCCCEEEEeccCccCcHHHHHHHHcCC
Q 017567          143 ALANVEEKPEILAGEQGVIEAA-RHPDAVTVVTGIVGCAGLKPTVAAIEAGK  193 (369)
Q Consensus       143 ~l~~~~~~~~v~~G~~gl~~~~-~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK  193 (369)
                       +.-.+..+.++.-. ...++. ...++|+|+.+.-.+...+-.-+.+++|.
T Consensus        81 -l~v~g~~i~v~~~~-dp~~i~w~~~~vDvV~eatg~~~s~e~a~~~l~~Ga  130 (354)
T 3cps_A           81 -LCINGKVVKVFQAK-DPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGA  130 (354)
T ss_dssp             -EEETTEEEEEECCS-CGGGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTC
T ss_pred             -EEECCeEEEEEecC-ChHHCCcccCCCCEEEECCCchhhHHHHHHHHHcCC
Confidence             00000112222111 111110 01258999999887777776667778884

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=93.87  E-value=0.065  Score=52.19  Aligned_cols=36  Identities=28%  Similarity=0.556  Sum_probs=31.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS  112 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~  112 (369)
                      +.||+|+|+||-||...++.+.++| .|+|++++..+
T Consensus        16 ~~kV~IiGAtG~iG~~llr~L~~~p-~~elvai~~~~   51 (359)
T 1xyg_A           16 DIRIGLLGASGYTGAEIVRLLANHP-HFQVTLMTADR   51 (359)
T ss_dssp             CEEEEEECCSSHHHHHHHHHHHTCS-SEEEEEEBCST
T ss_pred             CcEEEEECcCCHHHHHHHHHHHcCC-CcEEEEEeCch
Confidence            3589999999999999999999986 49999997654

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=93.85  E-value=0.2  Score=45.87  Aligned_cols=36  Identities=22%  Similarity=0.315  Sum_probs=27.9

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 017567           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (369)
Q Consensus        74 ~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (369)
                      ..+|+|.|.|+||.||....+-+.+.  .++|+++.-.
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~--G~~V~~~~r~   52 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQ--GRTVRGFDLR   52 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHT--TCCEEEEESS
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhC--CCEEEEEeCC
Confidence            34568999999999999999999876  5889888643

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=93.84  E-value=0.44  Score=43.54  Aligned_cols=64  Identities=17%  Similarity=0.170  Sum_probs=46.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|.+.+.+.+.++..+...+ .|-.+.+.+++.
T Consensus        27 ~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   91 (277)
T 4dqx_A           27 QRVCIVTGGGSGIGRATAELFAKN--GAYVVVAD--VNEDAAVRVANEIGSKAFGVRVDVSSAKDAESM   91 (277)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHhCCceEEEEecCCCHHHHHHH
Confidence            468999999999999999988876  57777653  67788888888877665554 444444444443

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=93.83  E-value=0.57  Score=41.67  Aligned_cols=80  Identities=19%  Similarity=0.087  Sum_probs=49.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh---hCCCEEEE-cCchhHHHHHHHHhcCCCCce
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR---FKPQVVAV-RNESLLDEIKEALANVEEKPE  152 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~---FkP~~V~v-~de~~~~~l~~~l~~~~~~~~  152 (369)
                      |++.|.|+||.||..+.+-+.+.  .++|+.+.  +|.+.+.+..++   ...+...+ .|-.+.+.+++.+..      
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~------   72 (256)
T 1geg_A            3 KVALVTGAGQGIGKAIALRLVKD--GFAVAIAD--YNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQ------   72 (256)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH------
T ss_pred             CEEEEECCCChHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH------
Confidence            67999999999999999988876  57777653  455555544443   34444333 454444455543321      


Q ss_pred             EEecHHHHHHHhcCCCCCEEEEe
Q 017567          153 ILAGEQGVIEAARHPDAVTVVTG  175 (369)
Q Consensus       153 v~~G~~gl~~~~~~~~~D~Vv~A  175 (369)
                             +.  .....+|+||+.
T Consensus        73 -------~~--~~~g~id~lv~n   86 (256)
T 1geg_A           73 -------AR--KTLGGFDVIVNN   86 (256)
T ss_dssp             -------HH--HHTTCCCEEEEC
T ss_pred             -------HH--HHhCCCCEEEEC
Confidence                   11  122468999985

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=93.82  E-value=0.37  Score=42.99  Aligned_cols=63  Identities=17%  Similarity=0.109  Sum_probs=46.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKE  142 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~  142 (369)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+  .+|.+.+.+.+.++..+...+ .|-.+.+.+++
T Consensus         6 gk~vlVTGas~gIG~a~a~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   69 (247)
T 3rwb_A            6 GKTALVTGAAQGIGKAIAARLAAD--GATVIVS--DINAEGAKAAAASIGKKARAIAADISDPGSVKA   69 (247)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEE--CSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHH
Confidence            468999999999999999998876  5777653  578888888888887666554 34344444444

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=93.81  E-value=0.2  Score=44.17  Aligned_cols=65  Identities=18%  Similarity=0.213  Sum_probs=41.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH---HHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD---QVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~e---Q~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|+|.|.|+||.||..+.+-+.+.  .++|+.+. +++.+.+.+   .+++..++...+ .|-.+.+.+++.
T Consensus         7 ~k~vlITGasggiG~~~a~~l~~~--G~~V~~~~-r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~   75 (261)
T 1gee_A            7 GKVVVITGSSTGLGKSMAIRFATE--KAKVVVNY-RSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINL   75 (261)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEE-SSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEc-CCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence            368999999999999999988876  57777654 335555444   333334443332 444444444443

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=93.79  E-value=0.26  Score=44.12  Aligned_cols=82  Identities=16%  Similarity=0.221  Sum_probs=54.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      |++.|.|+||.||..+.+-+.+....+.|+.+  .+|.+.+.+..+++..+...+ .|-.+.+.+++.+.          
T Consensus         3 k~~lVTGas~GIG~aia~~l~~~g~~~~v~~~--~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~----------   70 (254)
T 3kzv_A            3 KVILVTGVSRGIGKSIVDVLFSLDKDTVVYGV--ARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVN----------   70 (254)
T ss_dssp             CEEEECSTTSHHHHHHHHHHHHHCSSCEEEEE--ESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHH----------
T ss_pred             CEEEEECCCchHHHHHHHHHHhcCCCeEEEEe--cCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHH----------
Confidence            68999999999999999888765445666653  467888888777776555544 45444444544332          


Q ss_pred             cHHHHHHHhcCCCCCEEEEe
Q 017567          156 GEQGVIEAARHPDAVTVVTG  175 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~A  175 (369)
                         .+.+  ....+|++|+.
T Consensus        71 ---~~~~--~~g~id~lvnn   85 (254)
T 3kzv_A           71 ---AAVK--GHGKIDSLVAN   85 (254)
T ss_dssp             ---HHHH--HHSCCCEEEEE
T ss_pred             ---HHHH--hcCCccEEEEC
Confidence               1111  12368999987

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=93.79  E-value=0.7  Score=42.38  Aligned_cols=66  Identities=14%  Similarity=0.081  Sum_probs=43.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC--CHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS--NITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~--Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.-..  ..+.+.+.+++...+...+ .|-.+.+.+++.
T Consensus        47 gk~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  115 (291)
T 3ijr_A           47 GKNVLITGGDSGIGRAVSIAFAKE--GANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDI  115 (291)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            478999999999999999988876  57776654332  2344555566666665544 454444445443

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=93.78  E-value=0.36  Score=44.00  Aligned_cols=64  Identities=19%  Similarity=0.203  Sum_probs=47.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+  .+|.+.+.+..+++..+...+ .|-.+.+.+++.
T Consensus         5 gk~~lVTGas~GIG~aia~~la~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   69 (281)
T 3zv4_A            5 GEVALITGGASGLGRALVDRFVAE--GARVAVL--DKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRA   69 (281)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--cCEEEEE--eCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHH
Confidence            468999999999999999998876  5777765  467888888888876665544 454444455443

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=93.76  E-value=0.34  Score=43.57  Aligned_cols=64  Identities=13%  Similarity=-0.013  Sum_probs=43.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEE-EEcCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVV-AVRNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V-~v~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.  +|.+.+.+..+++..+.. ...|-.+.+.+++.
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   71 (260)
T 1nff_A            7 GKVALVSGGARGMGASHVRAMVAE--GAKVVFGD--ILDEEGKAMAAELADAARYVHLDVTQPAQWKAA   71 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHhhcCceEEEecCCCHHHHHHH
Confidence            368999999999999999988875  67877653  566777666666543322 23454444444443

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=93.76  E-value=0.12  Score=44.95  Aligned_cols=54  Identities=20%  Similarity=0.293  Sum_probs=37.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC------------CHHHHHHHHHhh--CCCEEEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS------------NITLLADQVKRF--KPQVVAV  131 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~------------Nv~lL~eQ~~~F--kP~~V~v  131 (369)
                      ||+|.|.|+||.||....+-+.+.  .++|+++.-..            +.+.+.+.+++|  +++.|+-
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~vi~   68 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARA--GHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGGVLDGLVC   68 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSSSSEECCTTSHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEeCChhHccccccCCcccHHHHHHHHHHcCCCccEEEE
Confidence            468999999999999999988875  57888875321            123344445555  6666653

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=93.75  E-value=0.49  Score=42.77  Aligned_cols=64  Identities=19%  Similarity=0.230  Sum_probs=42.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh----CCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF----KPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F----kP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|.+.+.+..+++    ..+...+ .|-.+.+.+++.
T Consensus        21 ~k~~lVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~   89 (267)
T 1vl8_A           21 GRVALVTGGSRGLGFGIAQGLAEA--GCSVVVAS--RNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKL   89 (267)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence            368999999999999999998876  57777653  5666665544433    4444433 454444445443

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=93.75  E-value=0.32  Score=43.80  Aligned_cols=42  Identities=19%  Similarity=0.348  Sum_probs=32.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQV  121 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~  121 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+++.  +|.+.+.+..
T Consensus        32 ~k~vlVTGasggIG~~la~~l~~~--G~~V~~~~--r~~~~~~~~~   73 (279)
T 1xg5_A           32 DRLALVTGASGGIGAAVARALVQQ--GLKVVGCA--RTVGNIEELA   73 (279)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEE--CChHHHHHHH
Confidence            368999999999999999998875  67887764  4555544433

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=93.71  E-value=0.4  Score=43.78  Aligned_cols=66  Identities=17%  Similarity=0.239  Sum_probs=42.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec-CCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-SNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag-~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.-. ...+.+.+++++...+...+ .|-.+.+.+++.
T Consensus        32 gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~   99 (276)
T 3r1i_A           32 GKRALITGASTGIGKKVALAYAEA--GAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGM   99 (276)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence            368999999999999999988876  5777765432 12345555555555444433 454444445443

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=93.71  E-value=0.051  Score=46.81  Aligned_cols=33  Identities=27%  Similarity=0.490  Sum_probs=28.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      +++|.|+|+||.||...++-+.+.  .++|++++-
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~--g~~V~~~~r   36 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNR--GFEVTAVVR   36 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTT--TCEEEEECS
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEEc
Confidence            578999999999999999999876  488988764

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=93.68  E-value=0.34  Score=44.21  Aligned_cols=64  Identities=19%  Similarity=0.149  Sum_probs=41.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIK  141 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~  141 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.-....+.+.+.+.+..++...+ .|-.+.+.++
T Consensus        31 gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~   95 (273)
T 3uf0_A           31 GRTAVVTGAGSGIGRAIAHGYARA--GAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAA   95 (273)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            368999999999999999988876  678887662222344445555444444433 4444444443

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=93.67  E-value=0.24  Score=46.81  Aligned_cols=91  Identities=8%  Similarity=0.088  Sum_probs=57.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCc-hhHHHHHHHHhcCCCCceEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNE-SLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de-~~~~~l~~~l~~~~~~~~v~  154 (369)
                      -++|.|.|++|.||..++.+++..  .++|++..  .|-+++. .++++..+.++-.++ +..+.+              
T Consensus       163 g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~Vi~~~--~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~--------------  223 (354)
T 2j8z_A          163 GDYVLIHAGLSGVGTAAIQLTRMA--GAIPLVTA--GSQKKLQ-MAEKLGAAAGFNYKKEDFSEAT--------------  223 (354)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHH-HHHHHTCSEEEETTTSCHHHHH--------------
T ss_pred             CCEEEEECCccHHHHHHHHHHHHc--CCEEEEEe--CCHHHHH-HHHHcCCcEEEecCChHHHHHH--------------
Confidence            368999999999999999999986  56887755  3445553 447787776653322 212222              


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcC
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~g  192 (369)
                            .+......+|+|+++..+ ..+...+.+++.|
T Consensus       224 ------~~~~~~~~~d~vi~~~G~-~~~~~~~~~l~~~  254 (354)
T 2j8z_A          224 ------LKFTKGAGVNLILDCIGG-SYWEKNVNCLALD  254 (354)
T ss_dssp             ------HHHTTTSCEEEEEESSCG-GGHHHHHHHEEEE
T ss_pred             ------HHHhcCCCceEEEECCCc-hHHHHHHHhccCC
Confidence                  222222358999998644 3454444444433

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=93.64  E-value=0.17  Score=44.76  Aligned_cols=65  Identities=22%  Similarity=0.168  Sum_probs=42.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH---HHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD---QVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~e---Q~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|+|.|.|+||.||....+-+.+.  .++|+++. ++|-+.+.+   .+++..++...+ .|-.+.+.+++.
T Consensus        21 ~k~vlItGasggiG~~la~~l~~~--G~~v~~~~-r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~   89 (274)
T 1ja9_A           21 GKVALTTGAGRGIGRGIAIELGRR--GASVVVNY-GSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVAL   89 (274)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEE-SSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEc-CCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Confidence            368999999999999999998886  57777754 335555443   444445554433 454444445443

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=93.59  E-value=0.51  Score=41.74  Aligned_cols=88  Identities=13%  Similarity=0.041  Sum_probs=55.3

Q ss_pred             CCCCCCeeEEEEecC--ChHhHHHHHHHHhCCCceEEEEEeec-CCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcC
Q 017567           71 KTWDGPKPISVLGST--GSIGTQTLDIVAEHEDKFRVVALAAG-SNITLLADQVKRFKPQVVAVRNESLLDEIKEALANV  147 (369)
Q Consensus        71 ~~~~~~kkI~ILGST--GSIGtqTLdVI~~~pd~F~VvaLaag-~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~  147 (369)
                      ......|+|.|.|+|  |.||..+.+-+.+.  .++|+.+.-. ++.+.+.+..+++.--.+...|-.+.+.+++.+.  
T Consensus         9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~--   84 (271)
T 3ek2_A            9 MGFLDGKRILLTGLLSNRSIAYGIAKACKRE--GAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFA--   84 (271)
T ss_dssp             CCTTTTCEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHH--
T ss_pred             ccccCCCEEEEeCCCCCCcHHHHHHHHHHHc--CCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHH--
Confidence            334556899999988  99999999988876  5777766533 3455666665665433334455555555554432  


Q ss_pred             CCCceEEecHHHHHHHhcCCCCCEEEEe
Q 017567          148 EEKPEILAGEQGVIEAARHPDAVTVVTG  175 (369)
Q Consensus       148 ~~~~~v~~G~~gl~~~~~~~~~D~Vv~A  175 (369)
                                 .+.  .....+|++|+.
T Consensus        85 -----------~~~--~~~g~id~lv~n   99 (271)
T 3ek2_A           85 -----------SLK--THWDSLDGLVHS   99 (271)
T ss_dssp             -----------HHH--HHCSCEEEEEEC
T ss_pred             -----------HHH--HHcCCCCEEEEC
Confidence                       111  123468998886

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=93.57  E-value=0.088  Score=47.32  Aligned_cols=34  Identities=24%  Similarity=0.312  Sum_probs=27.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      |+|.|.|+||+||....+-+.+.+..++|+++.-
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r   36 (312)
T 2yy7_A            3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDI   36 (312)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEES
T ss_pred             ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcC
Confidence            5799999999999999998876533577888763

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=93.57  E-value=0.43  Score=43.44  Aligned_cols=65  Identities=17%  Similarity=0.165  Sum_probs=43.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHH---HHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNIT---LLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~---lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+. .++.+   .+.+++++..++...+ .|-.+.+.+++.
T Consensus        31 gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~   99 (271)
T 3v2g_A           31 GKTAFVTGGSRGIGAAIAKRLALE--GAAVALTY-VNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQA   99 (271)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE-SSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEe-CCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            468999999999999999988875  67776654 44444   4455555556665544 454555555544

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=93.55  E-value=0.2  Score=45.34  Aligned_cols=37  Identities=16%  Similarity=0.285  Sum_probs=27.4

Q ss_pred             CCCCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           71 KTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        71 ~~~~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      +...+.++|.|.|+||.||....+-+.+.  .++|+++.
T Consensus         7 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~   43 (321)
T 2pk3_A            7 HHHHGSMRALITGVAGFVGKYLANHLTEQ--NVEVFGTS   43 (321)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE
T ss_pred             ccccCcceEEEECCCChHHHHHHHHHHHC--CCEEEEEe
Confidence            33455689999999999999999988875  57888875

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=93.53  E-value=0.77  Score=41.56  Aligned_cols=44  Identities=18%  Similarity=0.188  Sum_probs=33.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~  123 (369)
                      .|+|.|.|+||.||....+-+.+.  .++|+.+.  +|.+.+.+..++
T Consensus        18 ~k~vlVTGasggIG~~la~~l~~~--G~~V~~~~--r~~~~~~~~~~~   61 (303)
T 1yxm_A           18 GQVAIVTGGATGIGKAIVKELLEL--GSNVVIAS--RKLERLKSAADE   61 (303)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHH
Confidence            468999999999999999988875  57777654  556655544443

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=93.53  E-value=0.3  Score=42.74  Aligned_cols=64  Identities=13%  Similarity=0.146  Sum_probs=44.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      ||++.|.|+||.||..+..-+.+.  .++|+.+  .+|.+.+.+..+++..+...+ .|-.+.+.+++.
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   65 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAE--GKATYLT--GRSESKLSTVTNCLSNNVGYRARDLASHQEVEQL   65 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHT--TCCEEEE--ESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHH
T ss_pred             CCEEEEecCCchHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHH
Confidence            578999999999999999998876  4666654  467888888888775443332 454444444443

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=93.52  E-value=0.53  Score=42.14  Aligned_cols=64  Identities=11%  Similarity=0.114  Sum_probs=41.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh-----CCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF-----KPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F-----kP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.  +|.+.+.+..+++     ..+...+ .|-.+.+.+++.
T Consensus        13 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   82 (267)
T 1iy8_A           13 DRVVLITGGGSGLGRATAVRLAAE--GAKLSLVD--VSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAY   82 (267)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHH
Confidence            468999999999999999998876  57777754  4555555444333     3343333 454444455443

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=93.50  E-value=0.51  Score=41.83  Aligned_cols=64  Identities=25%  Similarity=0.235  Sum_probs=41.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCCEEE-EcCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQVVA-VRNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F---kP~~V~-v~de~~~~~l~~~  143 (369)
                      .|+|.|.|+||.||..+.+-+.+.  .++|+++.  +|.+.+.+...++   ..+... ..|-...+.+++.
T Consensus        14 ~k~vlITGasggiG~~la~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   81 (266)
T 1xq1_A           14 AKTVLVTGGTKGIGHAIVEEFAGF--GAVIHTCA--RNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKL   81 (266)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHH
Confidence            368999999999999999988875  57777754  4555555444433   344332 3455555455543

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=93.50  E-value=0.67  Score=42.03  Aligned_cols=81  Identities=20%  Similarity=0.182  Sum_probs=50.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH---hhCCCEEEE-cCchhHHHHHHHHhcCCCCc
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK---RFKPQVVAV-RNESLLDEIKEALANVEEKP  151 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~---~FkP~~V~v-~de~~~~~l~~~l~~~~~~~  151 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.  +|-+.+.+..+   +...+...+ .|-.+.+.+++.+.      
T Consensus        22 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~------   91 (277)
T 2rhc_B           22 SEVALVTGATSGIGLEIARRLGKE--GLRVFVCA--RGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVA------   91 (277)
T ss_dssp             SCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH------
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHH------
Confidence            368999999999999999998875  57887654  45555544433   334444333 45444444444331      


Q ss_pred             eEEecHHHHHHHhcCCCCCEEEEe
Q 017567          152 EILAGEQGVIEAARHPDAVTVVTG  175 (369)
Q Consensus       152 ~v~~G~~gl~~~~~~~~~D~Vv~A  175 (369)
                             .+.  .+...+|+||+.
T Consensus        92 -------~~~--~~~g~iD~lv~~  106 (277)
T 2rhc_B           92 -------AVV--ERYGPVDVLVNN  106 (277)
T ss_dssp             -------HHH--HHTCSCSEEEEC
T ss_pred             -------HHH--HHhCCCCEEEEC
Confidence                   111  123468999986

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=93.49  E-value=0.22  Score=48.46  Aligned_cols=51  Identities=18%  Similarity=0.220  Sum_probs=40.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV  131 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v  131 (369)
                      -++|.|.|+||.||..++.+.+..  ..+|++.+  .+-+++ +.++++..+.+.-
T Consensus       221 g~~VlV~GasG~iG~~a~qla~~~--Ga~vi~~~--~~~~~~-~~~~~lGa~~~i~  271 (447)
T 4a0s_A          221 GDIVLIWGASGGLGSYAIQFVKNG--GGIPVAVV--SSAQKE-AAVRALGCDLVIN  271 (447)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEE--SSHHHH-HHHHHTTCCCEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEe--CCHHHH-HHHHhcCCCEEEe
Confidence            368999999999999999999986  56888776  455665 4568888877654

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=93.48  E-value=0.34  Score=43.43  Aligned_cols=66  Identities=11%  Similarity=0.082  Sum_probs=42.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec-------------CCHHHHHHHHHhhCCCEEEE-cCchhHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-------------SNITLLADQVKRFKPQVVAV-RNESLLDEIK  141 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag-------------~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~  141 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.-.             .+.+.+.+.+++..++...+ .|-.+.+.++
T Consensus        10 gk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   87 (287)
T 3pxx_A           10 DKVVLVTGGARGQGRSHAVKLAEE--GADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVS   87 (287)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC--CCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHH
Confidence            468999999999999999998886  6778776432             12344444555555555544 3444444444


Q ss_pred             HH
Q 017567          142 EA  143 (369)
Q Consensus       142 ~~  143 (369)
                      +.
T Consensus        88 ~~   89 (287)
T 3pxx_A           88 RE   89 (287)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=93.48  E-value=0.4  Score=45.43  Aligned_cols=93  Identities=18%  Similarity=0.188  Sum_probs=61.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchh-HHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL-LDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~-~~~l~~~l~~~~~~~~v~~  155 (369)
                      ++|.|+| +|.||..++.+.+..  ..+|++...  +-+++ +.++++..+.+.-.++.. .+.+               
T Consensus       191 ~~VlV~G-~G~vG~~a~qla~~~--Ga~Vi~~~~--~~~~~-~~~~~lGa~~vi~~~~~~~~~~v---------------  249 (363)
T 3uog_A          191 DRVVVQG-TGGVALFGLQIAKAT--GAEVIVTSS--SREKL-DRAFALGADHGINRLEEDWVERV---------------  249 (363)
T ss_dssp             CEEEEES-SBHHHHHHHHHHHHT--TCEEEEEES--CHHHH-HHHHHHTCSEEEETTTSCHHHHH---------------
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHc--CCEEEEEec--CchhH-HHHHHcCCCEEEcCCcccHHHHH---------------
Confidence            5899999 899999999999986  568887653  44444 347888888776533222 2222               


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCcee
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~ia  196 (369)
                           .++.....+|+|+++.. -..+.-.+.+++.|-++.
T Consensus       250 -----~~~~~g~g~D~vid~~g-~~~~~~~~~~l~~~G~iv  284 (363)
T 3uog_A          250 -----YALTGDRGADHILEIAG-GAGLGQSLKAVAPDGRIS  284 (363)
T ss_dssp             -----HHHHTTCCEEEEEEETT-SSCHHHHHHHEEEEEEEE
T ss_pred             -----HHHhCCCCceEEEECCC-hHHHHHHHHHhhcCCEEE
Confidence                 23333346999999854 566666666666554443

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=93.45  E-value=0.23  Score=46.87  Aligned_cols=88  Identities=14%  Similarity=0.141  Sum_probs=56.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      -++|.|.|++|.||..++.+.+..  ..+|++..  .|-+++ +.++++..+.+.-.++...   .              
T Consensus       168 g~~VlV~Gg~g~iG~~~~~~a~~~--Ga~Vi~~~--~~~~~~-~~~~~lGa~~~~~~~~~~~---~--------------  225 (353)
T 4dup_A          168 GESVLIHGGTSGIGTTAIQLARAF--GAEVYATA--GSTGKC-EACERLGAKRGINYRSEDF---A--------------  225 (353)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE--SSHHHH-HHHHHHTCSEEEETTTSCH---H--------------
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEe--CCHHHH-HHHHhcCCCEEEeCCchHH---H--------------
Confidence            368999999999999999999986  56787765  344554 5667788877654333221   1              


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHH
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAI  189 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai  189 (369)
                        +.+.++. ...+|+|+++..+ ..+...+.++
T Consensus       226 --~~~~~~~-~~g~Dvvid~~g~-~~~~~~~~~l  255 (353)
T 4dup_A          226 --AVIKAET-GQGVDIILDMIGA-AYFERNIASL  255 (353)
T ss_dssp             --HHHHHHH-SSCEEEEEESCCG-GGHHHHHHTE
T ss_pred             --HHHHHHh-CCCceEEEECCCH-HHHHHHHHHh
Confidence              1222333 3468999998544 3344333333

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=93.43  E-value=0.43  Score=42.56  Aligned_cols=65  Identities=15%  Similarity=0.133  Sum_probs=40.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC---HHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN---ITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~N---v~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      |++.|.|+||.||..+..-+.+.  .++|+.+.-...   .+.+.+++++...+...+ .|-.+.+.+++.
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   71 (258)
T 3a28_C            3 KVAMVTGGAQGIGRGISEKLAAD--GFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSA   71 (258)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHH--TCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            67999999999999999988875  577776643322   233444444444444433 444444444443

>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*

Probab=93.43  E-value=0.54  Score=45.74  Aligned_cols=107  Identities=18%  Similarity=0.238  Sum_probs=65.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCC-CceEEEEEeecCCHHHHHHHHH------hhCCCEEEEcCchhHHHHHHHHhcCCC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHE-DKFRVVALAAGSNITLLADQVK------RFKPQVVAVRNESLLDEIKEALANVEE  149 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~p-d~F~VvaLaag~Nv~lL~eQ~~------~FkP~~V~v~de~~~~~l~~~l~~~~~  149 (369)
                      .||+|.|. |-||+..++.+.++. ..|+|+++.-....+.++.+.+      +|... |...+..        |.-.+.
T Consensus         3 ikVgI~G~-G~IGr~v~r~l~~~~~~~~evvaInd~~~~~~~~~l~~~ds~~G~~~~~-v~~~~~~--------l~v~g~   72 (339)
T 3b1j_A            3 IRVAINGF-GRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNAD-ISYDENS--------ITVNGK   72 (339)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHCSCCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSC-EEEETTE--------EEETTE
T ss_pred             eEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHhccccccCCCCCc-EEEcCCe--------eeecCc
Confidence            58999999 999999999999883 4699999987667777765543      12211 1111000        000000


Q ss_pred             CceEEecHHHHHHHh-cCCCCCEEEEeccCccCcHHHHHHHHcCCc
Q 017567          150 KPEILAGEQGVIEAA-RHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (369)
Q Consensus       150 ~~~v~~G~~gl~~~~-~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~  194 (369)
                      .+.++. +....++. ...++|+|+.+.-.+...+-.-..+++|.+
T Consensus        73 ~i~v~~-~~dp~~l~w~~~~vDvV~e~tg~~~s~e~a~~~l~~Gak  117 (339)
T 3b1j_A           73 TMKIVC-DRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAK  117 (339)
T ss_dssp             EEEEEC-CSCGGGSCTTTTTCCEEEECSSSCCBHHHHHHHHHTTCS
T ss_pred             eEEEEe-cCChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCc
Confidence            112221 11112221 112689999998888887777788899954

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=93.41  E-value=0.34  Score=43.43  Aligned_cols=82  Identities=17%  Similarity=0.203  Sum_probs=51.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec-CCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHHHhcCCCCceE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-SNITLLADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPEI  153 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag-~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~l~~~~~~~~v  153 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.-. ...+.+.+++++..++...+ .|-.+.+.+++.+.        
T Consensus         7 ~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~--------   76 (252)
T 3h7a_A            7 NATVAVIGAGDYIGAEIAKKFAAE--GFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLN--------   76 (252)
T ss_dssp             SCEEEEECCSSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH--------
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHH--------
Confidence            468999999999999999999886  5777765422 23445555555555554443 45444545544331        


Q ss_pred             EecHHHHHHHhcCCCCCEEEEe
Q 017567          154 LAGEQGVIEAARHPDAVTVVTG  175 (369)
Q Consensus       154 ~~G~~gl~~~~~~~~~D~Vv~A  175 (369)
                           .+.+  . ..+|++|+.
T Consensus        77 -----~~~~--~-g~id~lv~n   90 (252)
T 3h7a_A           77 -----AADA--H-APLEVTIFN   90 (252)
T ss_dssp             -----HHHH--H-SCEEEEEEC
T ss_pred             -----HHHh--h-CCceEEEEC
Confidence                 1111  1 468998886

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=93.40  E-value=0.53  Score=41.46  Aligned_cols=45  Identities=18%  Similarity=0.118  Sum_probs=34.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.  +|.+.+.+..+++
T Consensus         7 ~k~vlITGasggiG~~la~~l~~~--G~~V~~~~--r~~~~~~~~~~~~   51 (264)
T 2pd6_A            7 SALALVTGAGSGIGRAVSVRLAGE--GATVAACD--LDRAAAQETVRLL   51 (264)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SSHHHHHHHHHTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEe--CChHHHHHHHHHH
Confidence            368999999999999999988875  57787764  5666666655544

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=93.40  E-value=0.41  Score=43.09  Aligned_cols=82  Identities=20%  Similarity=0.212  Sum_probs=51.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHH---HHHHhhCCCEEEE-cCchhHHHHHHHHhcCCCCc
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLA---DQVKRFKPQVVAV-RNESLLDEIKEALANVEEKP  151 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~---eQ~~~FkP~~V~v-~de~~~~~l~~~l~~~~~~~  151 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+. .+|-+.+.   +++++..++...+ .|-.+.+.+++.+.      
T Consensus         4 ~k~vlVTGas~gIG~aia~~l~~~--G~~vv~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~------   74 (258)
T 3oid_A            4 NKCALVTGSSRGVGKAAAIRLAEN--GYNIVINY-ARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQ------   74 (258)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEE-SSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHH------
T ss_pred             CCEEEEecCCchHHHHHHHHHHHC--CCEEEEEc-CCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH------
Confidence            468999999999999999988875  67787643 44555544   4444455555444 45444555554432      


Q ss_pred             eEEecHHHHHHHhcCCCCCEEEEe
Q 017567          152 EILAGEQGVIEAARHPDAVTVVTG  175 (369)
Q Consensus       152 ~v~~G~~gl~~~~~~~~~D~Vv~A  175 (369)
                             .+.+  +....|++|+.
T Consensus        75 -------~~~~--~~g~id~lv~n   89 (258)
T 3oid_A           75 -------QIDE--TFGRLDVFVNN   89 (258)
T ss_dssp             -------HHHH--HHSCCCEEEEC
T ss_pred             -------HHHH--HcCCCCEEEEC
Confidence                   1111  12358999886

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=93.39  E-value=0.34  Score=46.30  Aligned_cols=96  Identities=15%  Similarity=0.209  Sum_probs=60.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCc-eEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDK-FRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~-F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .+|.|.| +|.||..++.+.+..  . .+|+++..  +-+++ +.++++..+.+.-.+...-+.+.+             
T Consensus       197 ~~VlV~G-aG~vG~~aiqlak~~--Ga~~Vi~~~~--~~~~~-~~~~~lGa~~vi~~~~~~~~~~~~-------------  257 (380)
T 1vj0_A          197 KTVVIQG-AGPLGLFGVVIARSL--GAENVIVIAG--SPNRL-KLAEEIGADLTLNRRETSVEERRK-------------  257 (380)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHT--TBSEEEEEES--CHHHH-HHHHHTTCSEEEETTTSCHHHHHH-------------
T ss_pred             CEEEEEC-cCHHHHHHHHHHHHc--CCceEEEEcC--CHHHH-HHHHHcCCcEEEeccccCcchHHH-------------
Confidence            5899999 899999999999986  4 47887663  34444 456788888765433000111221             


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCc
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~  194 (369)
                         .+.++.....+|+|++++.+-..+.-.+.+++.|-+
T Consensus       258 ---~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~  293 (380)
T 1vj0_A          258 ---AIMDITHGRGADFILEATGDSRALLEGSELLRRGGF  293 (380)
T ss_dssp             ---HHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEE
T ss_pred             ---HHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCE
Confidence               122233223589999997655566666666655433

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=93.37  E-value=0.4  Score=42.50  Aligned_cols=65  Identities=22%  Similarity=0.238  Sum_probs=42.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHH---HHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNIT---LLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~---lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+. .++.+   .+.+.+++..++...+ .|-.+.+.+++.
T Consensus         4 ~k~~lVTGas~gIG~~ia~~l~~~--G~~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   72 (246)
T 3osu_A            4 TKSALVTGASRGIGRSIALQLAEE--GYNVAVNY-AGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAM   72 (246)
T ss_dssp             SCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEE-SSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEe-CCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            368999999999999999988876  67776654 44444   4444555555555443 444444444443

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=93.37  E-value=0.64  Score=41.50  Aligned_cols=81  Identities=11%  Similarity=0.112  Sum_probs=50.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCC-----CEE-EEcCchhHHHHHHHHhcCCC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKP-----QVV-AVRNESLLDEIKEALANVEE  149 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP-----~~V-~v~de~~~~~l~~~l~~~~~  149 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+++.  +|.+.+.+...+...     +.. ...|-.+.+.+++.+.    
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~----   78 (267)
T 2gdz_A            7 GKVALVTGAAQGIGRAFAEALLLK--GAKVALVD--WNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFR----   78 (267)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHH----
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHH----
Confidence            368999999999999999998876  57887754  566666554444421     222 2345444445554432    


Q ss_pred             CceEEecHHHHHHHhcCCCCCEEEEe
Q 017567          150 KPEILAGEQGVIEAARHPDAVTVVTG  175 (369)
Q Consensus       150 ~~~v~~G~~gl~~~~~~~~~D~Vv~A  175 (369)
                               .+.+-  ...+|+||+.
T Consensus        79 ---------~~~~~--~g~id~lv~~   93 (267)
T 2gdz_A           79 ---------KVVDH--FGRLDILVNN   93 (267)
T ss_dssp             ---------HHHHH--HSCCCEEEEC
T ss_pred             ---------HHHHH--cCCCCEEEEC
Confidence                     11121  2358999986

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=93.36  E-value=0.51  Score=44.46  Aligned_cols=97  Identities=20%  Similarity=0.193  Sum_probs=61.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .+|.|.|+ |.||..++.+.+..  .. +|++...  +-+++ +.++++..+.+.-.++...+++.+             
T Consensus       173 ~~VlV~Ga-G~vG~~aiqlak~~--Ga~~Vi~~~~--~~~~~-~~a~~lGa~~vi~~~~~~~~~~~~-------------  233 (356)
T 1pl8_A          173 HKVLVCGA-GPIGMVTLLVAKAM--GAAQVVVTDL--SATRL-SKAKEIGADLVLQISKESPQEIAR-------------  233 (356)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT--TCSEEEEEES--CHHHH-HHHHHTTCSEEEECSSCCHHHHHH-------------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHc--CCCEEEEECC--CHHHH-HHHHHhCCCEEEcCcccccchHHH-------------
Confidence            57999996 99999999999976  45 6777653  33443 556788887765433100111111             


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCcee
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~ia  196 (369)
                         .+.+... ..+|+|+++..+-..+.-.+.+++.|-++.
T Consensus       234 ---~i~~~~~-~g~D~vid~~g~~~~~~~~~~~l~~~G~iv  270 (356)
T 1pl8_A          234 ---KVEGQLG-CKPEVTIECTGAEASIQAGIYATRSGGTLV  270 (356)
T ss_dssp             ---HHHHHHT-SCCSEEEECSCCHHHHHHHHHHSCTTCEEE
T ss_pred             ---HHHHHhC-CCCCEEEECCCChHHHHHHHHHhcCCCEEE
Confidence               1223333 469999999766555666667776665544

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=93.35  E-value=0.35  Score=43.44  Aligned_cols=63  Identities=29%  Similarity=0.336  Sum_probs=45.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKE  142 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~  142 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+  .+|.+.+.+..+++.++...+ .|-.+.+.++.
T Consensus         8 gk~~lVTGas~gIG~a~a~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   71 (255)
T 4eso_A            8 GKKAIVIGGTHGMGLATVRRLVEG--GAEVLLT--GRNESNIARIREEFGPRVHALRSDIADLNEIAV   71 (255)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHhCCcceEEEccCCCHHHHHH
Confidence            368999999999999999988876  5777765  367888888888876665544 44444444443

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=93.31  E-value=0.23  Score=45.20  Aligned_cols=35  Identities=29%  Similarity=0.348  Sum_probs=28.5

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (369)
                      ..++|.|.|+||+||....+-+.+.  .++|+++.-.
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~   47 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEK--GYRVHGLVAR   47 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECC
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHC--CCeEEEEeCC
Confidence            3568999999999999999988875  5889988643

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=93.31  E-value=0.42  Score=42.82  Aligned_cols=65  Identities=11%  Similarity=0.093  Sum_probs=42.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHH---HhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQV---KRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~---~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+. ++|.+.+.+.+   ++..++...+ .|-.+.+.+++.
T Consensus        26 ~k~vlVTGas~gIG~~la~~l~~~--G~~v~i~~-~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~   94 (267)
T 4iiu_A           26 SRSVLVTGASKGIGRAIARQLAAD--GFNIGVHY-HRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREV   94 (267)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEE-SSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEe-CCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHH
Confidence            368999999999999999998876  67776554 45655554444   3444444443 344444444443

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=93.30  E-value=0.09  Score=49.33  Aligned_cols=35  Identities=17%  Similarity=0.270  Sum_probs=30.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (369)
                      +.||+|.|+||.+|+..++.+.+.|+ ++|+++.-.
T Consensus         5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~-~elva~~d~   39 (273)
T 1dih_A            5 NIRVAIAGAGGRMGRQLIQAALALEG-VQLGAALER   39 (273)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTT-EECCCEECC
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCC-CEEEEEEec
Confidence            45899999999999999998888765 999987654

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=93.28  E-value=1.1  Score=40.47  Aligned_cols=64  Identities=13%  Similarity=0.198  Sum_probs=42.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh----CCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF----KPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F----kP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+  .+|.+.+.+.+.++    ..+...+ .|-.+.+.+++.
T Consensus        27 ~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   95 (277)
T 4fc7_A           27 DKVAFITGGGSGIGFRIAEIFMRH--GCHTVIA--SRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAA   95 (277)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHTT--TCEEEEE--ESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence            478999999999999999998876  5777764  35666665555443    4444433 454444444443

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=93.26  E-value=0.39  Score=43.50  Aligned_cols=85  Identities=14%  Similarity=0.060  Sum_probs=50.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHH---HhhCC-CE-EEEcCchhHHHHHHHHhcCCCC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQV---KRFKP-QV-VAVRNESLLDEIKEALANVEEK  150 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~---~~FkP-~~-V~v~de~~~~~l~~~l~~~~~~  150 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+++.  +|.+.+.+..   ++... +. +...|-.+.+.+++.+.     
T Consensus        28 ~k~vlITGasggIG~~la~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~-----   98 (286)
T 1xu9_A           28 GKKVIVTGASKGIGREMAYHLAKM--GAHVVVTA--RSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVA-----   98 (286)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHH-----
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHH-----
Confidence            368999999999999999988876  57887764  4555554443   33332 22 22344444444444321     


Q ss_pred             ceEEecHHHHHHHhcCCCCCEEEEeccCc
Q 017567          151 PEILAGEQGVIEAARHPDAVTVVTGIVGC  179 (369)
Q Consensus       151 ~~v~~G~~gl~~~~~~~~~D~Vv~AIvG~  179 (369)
                              .+.+.  ...+|+||+...|.
T Consensus        99 --------~~~~~--~g~iD~li~naag~  117 (286)
T 1xu9_A           99 --------QAGKL--MGGLDMLILNHITN  117 (286)
T ss_dssp             --------HHHHH--HTSCSEEEECCCCC
T ss_pred             --------HHHHH--cCCCCEEEECCccC
Confidence                    11111  23689999764443

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=93.26  E-value=0.33  Score=45.41  Aligned_cols=92  Identities=15%  Similarity=0.109  Sum_probs=57.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      -++|.|.|++|.||..++.+.+..  ..+|++..  +|-+++ +.++++..+.+.-..+..   +.              
T Consensus       167 g~~vlV~Gasg~iG~~~~~~a~~~--G~~Vi~~~--~~~~~~-~~~~~~ga~~~~d~~~~~---~~--------------  224 (343)
T 2eih_A          167 GDDVLVMAAGSGVSVAAIQIAKLF--GARVIATA--GSEDKL-RRAKALGADETVNYTHPD---WP--------------  224 (343)
T ss_dssp             TCEEEECSTTSTTHHHHHHHHHHT--TCEEEEEE--SSHHHH-HHHHHHTCSEEEETTSTT---HH--------------
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEe--CCHHHH-HHHHhcCCCEEEcCCccc---HH--------------
Confidence            368999999999999999999986  46787765  344444 445677777654222211   11              


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcC
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~g  192 (369)
                        +.+.++.....+|+|+++.. -..+.-.+.+++.+
T Consensus       225 --~~~~~~~~~~~~d~vi~~~g-~~~~~~~~~~l~~~  258 (343)
T 2eih_A          225 --KEVRRLTGGKGADKVVDHTG-ALYFEGVIKATANG  258 (343)
T ss_dssp             --HHHHHHTTTTCEEEEEESSC-SSSHHHHHHHEEEE
T ss_pred             --HHHHHHhCCCCceEEEECCC-HHHHHHHHHhhccC
Confidence              11222322235899999865 45555555555443

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=93.24  E-value=0.48  Score=43.12  Aligned_cols=46  Identities=22%  Similarity=0.210  Sum_probs=35.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK  125 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~Fk  125 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+  .+|.+.+.+..++.+
T Consensus        29 ~k~vlVTGas~gIG~aia~~L~~~--G~~V~~~--~r~~~~~~~~~~~l~   74 (276)
T 2b4q_A           29 GRIALVTGGSRGIGQMIAQGLLEA--GARVFIC--ARDAEACADTATRLS   74 (276)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEE--CSCHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHHH
Confidence            368999999999999999988875  5777765  356777766665553

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=93.23  E-value=0.6  Score=41.20  Aligned_cols=68  Identities=25%  Similarity=0.212  Sum_probs=44.1

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec--CCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG--SNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        74 ~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag--~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      ...|+|.|.|+||.||....+-+.+.  .++|+.+...  ...+.+.+..++...+...+ .|-.+.+.+++.
T Consensus        11 ~~~k~vlITGas~giG~~ia~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   81 (256)
T 3ezl_A           11 MSQRIAYVTGGMGGIGTSICQRLHKD--GFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQA   81 (256)
T ss_dssp             --CEEEEETTTTSHHHHHHHHHHHHT--TEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHH
Confidence            45689999999999999999988876  6888776532  23445555566666554443 444444444443

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=93.22  E-value=0.39  Score=43.35  Aligned_cols=66  Identities=21%  Similarity=0.212  Sum_probs=44.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC--CHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS--NITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~--Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+..++  ..+.+.+++++..++...+ .|-.+.+.+++.
T Consensus        18 ~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   86 (270)
T 3is3_A           18 GKVALVTGSGRGIGAAVAVHLGRL--GAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKL   86 (270)
T ss_dssp             TCEEEESCTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence            468999999999999999988876  67887654432  2345556666666665554 454445555544

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=93.22  E-value=0.063  Score=50.77  Aligned_cols=52  Identities=19%  Similarity=0.344  Sum_probs=42.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec-CCHHHHHHHHHhhCCCEEE
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-SNITLLADQVKRFKPQVVA  130 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag-~Nv~lL~eQ~~~FkP~~V~  130 (369)
                      .+|.|.|++|.||..++.+.+..  ..++++++.. .+.+...+.++++..+.+.
T Consensus       169 ~~VlV~Ga~G~vG~~aiqlak~~--Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi  221 (357)
T 1zsy_A          169 DSVIQNASNSGVGQAVIQIAAAL--GLRTINVVRDRPDIQKLSDRLKSLGAEHVI  221 (357)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHH--TCEEEEEECCCSCHHHHHHHHHHTTCSEEE
T ss_pred             CEEEEeCCcCHHHHHHHHHHHHc--CCEEEEEecCccchHHHHHHHHhcCCcEEE
Confidence            58999999999999999999976  5778887754 3555566788899988765

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=93.19  E-value=0.4  Score=43.07  Aligned_cols=65  Identities=17%  Similarity=0.190  Sum_probs=42.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHH---HHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLL---ADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL---~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+. .+|-+.+   .+++++..++...+ .|-.+.+.+++.
T Consensus        26 ~k~vlITGas~gIG~a~a~~l~~~--G~~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~   94 (272)
T 4e3z_A           26 TPVVLVTGGSRGIGAAVCRLAARQ--GWRVGVNY-AANREAADAVVAAITESGGEAVAIPGDVGNAADIAAM   94 (272)
T ss_dssp             SCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEE-SSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEc-CCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence            468999999999999999988876  67776543 4455444   44445555554443 444444445443

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=93.18  E-value=0.16  Score=47.77  Aligned_cols=92  Identities=12%  Similarity=0.104  Sum_probs=56.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      -++|.|+|+ |.||..++.+.+..  .. +|+++..  +-+++ +.++++..+.+.-.++...   .             
T Consensus       168 g~~VlV~Ga-G~vG~~~~q~a~~~--Ga~~Vi~~~~--~~~~~-~~~~~~Ga~~~~~~~~~~~---~-------------  225 (348)
T 2d8a_A          168 GKSVLITGA-GPLGLLGIAVAKAS--GAYPVIVSEP--SDFRR-ELAKKVGADYVINPFEEDV---V-------------  225 (348)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHHT--TCCSEEEECS--CHHHH-HHHHHHTCSEEECTTTSCH---H-------------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCCEEEEECC--CHHHH-HHHHHhCCCEEECCCCcCH---H-------------
Confidence            357999999 99999999999986  45 6777553  44444 4567788776643222111   1             


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcC
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~g  192 (369)
                         +.+.++.....+|+|+++..+...+.-.+.+++.|
T Consensus       226 ---~~v~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~  260 (348)
T 2d8a_A          226 ---KEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPA  260 (348)
T ss_dssp             ---HHHHHHTTTSCEEEEEECSCCHHHHHHHHHHEEEE
T ss_pred             ---HHHHHHcCCCCCCEEEECCCCHHHHHHHHHHHhcC
Confidence               11222322235899999865534444444444433

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=93.17  E-value=0.41  Score=43.27  Aligned_cols=66  Identities=11%  Similarity=0.041  Sum_probs=42.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee-----------cCCHHHHHH---HHHhhCCCEEEE-cCchhHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA-----------GSNITLLAD---QVKRFKPQVVAV-RNESLLDEI  140 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa-----------g~Nv~lL~e---Q~~~FkP~~V~v-~de~~~~~l  140 (369)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.-           .+|.+.+.+   ++++...+...+ .|-.+.+.+
T Consensus        15 gk~~lVTGas~gIG~a~a~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   92 (280)
T 3pgx_A           15 GRVAFITGAARGQGRSHAVRLAAE--GADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL   92 (280)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            368999999999999999988876  678887642           125555544   444445555443 454444444


Q ss_pred             HHH
Q 017567          141 KEA  143 (369)
Q Consensus       141 ~~~  143 (369)
                      ++.
T Consensus        93 ~~~   95 (280)
T 3pgx_A           93 REL   95 (280)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            443

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=93.15  E-value=0.14  Score=49.10  Aligned_cols=38  Identities=18%  Similarity=0.482  Sum_probs=32.5

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN  113 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~N  113 (369)
                      .|.||+|.|++|-+|+..++.+.+.|+ ++++|....+.
T Consensus        20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~-~eLvg~vd~~~   57 (288)
T 3ijp_A           20 GSMRLTVVGANGRMGRELITAIQRRKD-VELCAVLVRKG   57 (288)
T ss_dssp             -CEEEEESSTTSHHHHHHHHHHHTCSS-EEEEEEBCCTT
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHhCCC-CEEEEEEecCC
Confidence            456999999999999999999998764 99999977643

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=93.14  E-value=0.21  Score=47.49  Aligned_cols=90  Identities=14%  Similarity=0.104  Sum_probs=56.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .++|.|.|++|.||..++.+.+..  ..+|++..  ++-+++ +.++++..+.+.-.++...   .+             
T Consensus       164 g~~VlV~Ga~G~iG~~~~q~a~~~--Ga~Vi~~~--~~~~~~-~~~~~~Ga~~~~~~~~~~~---~~-------------  222 (362)
T 2c0c_A          164 GKKVLVTAAAGGTGQFAMQLSKKA--KCHVIGTC--SSDEKS-AFLKSLGCDRPINYKTEPV---GT-------------  222 (362)
T ss_dssp             TCEEEETTTTBTTHHHHHHHHHHT--TCEEEEEE--SSHHHH-HHHHHTTCSEEEETTTSCH---HH-------------
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEE--CCHHHH-HHHHHcCCcEEEecCChhH---HH-------------
Confidence            368999999999999999999987  56787765  344444 4567788877654332221   11             


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHc
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEA  191 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~  191 (369)
                         .+.+.. ...+|+|+++..+ ..+...+.+++.
T Consensus       223 ---~~~~~~-~~g~D~vid~~g~-~~~~~~~~~l~~  253 (362)
T 2c0c_A          223 ---VLKQEY-PEGVDVVYESVGG-AMFDLAVDALAT  253 (362)
T ss_dssp             ---HHHHHC-TTCEEEEEECSCT-HHHHHHHHHEEE
T ss_pred             ---HHHHhc-CCCCCEEEECCCH-HHHHHHHHHHhc
Confidence               122222 2358999998654 444444444433

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=93.14  E-value=0.066  Score=48.09  Aligned_cols=33  Identities=21%  Similarity=0.257  Sum_probs=28.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      +++|.|+|+||.||...++-+.+.  .++|+++.-
T Consensus         7 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r   39 (321)
T 3vps_A            7 KHRILITGGAGFIGGHLARALVAS--GEEVTVLDD   39 (321)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCCEEEECC
T ss_pred             CCeEEEECCCChHHHHHHHHHHHC--CCEEEEEec
Confidence            578999999999999999999876  578988864

>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*

Probab=93.13  E-value=0.86  Score=41.76  Aligned_cols=130  Identities=19%  Similarity=0.186  Sum_probs=73.7

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCC--CceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCc-----hh-HHHHHHHHh
Q 017567           74 DGPKPISVLGSTGSIGTQTLDIVAEHE--DKFRVVALAAGSNITLLADQVKRFKPQVVAVRNE-----SL-LDEIKEALA  145 (369)
Q Consensus        74 ~~~kkI~ILGSTGSIGtqTLdVI~~~p--d~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de-----~~-~~~l~~~l~  145 (369)
                      +.++||+||.|-.  |++.-.++.+..  -.++|+++..++. ....+.|+++.-.+..+.-.     +. -+++.+.|.
T Consensus        10 ~~~~ri~vl~SG~--gsnl~all~~~~~~~~~eI~~Vis~~~-a~~~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~   86 (215)
T 3da8_A           10 SAPARLVVLASGT--GSLLRSLLDAAVGDYPARVVAVGVDRE-CRAAEIAAEASVPVFTVRLADHPSRDAWDVAITAATA   86 (215)
T ss_dssp             CSSEEEEEEESSC--CHHHHHHHHHSSTTCSEEEEEEEESSC-CHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHH
T ss_pred             CCCcEEEEEEeCC--hHHHHHHHHHHhccCCCeEEEEEeCCc-hHHHHHHHHcCCCEEEeCcccccchhhhhHHHHHHHH
Confidence            4567999997643  555555555432  2479999998887 44557788888777666210     01 123334444


Q ss_pred             cCCCCceEEecH-----HHHHHHhcCCCCCEEEEe----ccCccCcHHHHHHHHcCC-----ceeeecccceeecccchh
Q 017567          146 NVEEKPEILAGE-----QGVIEAARHPDAVTVVTG----IVGCAGLKPTVAAIEAGK-----DIALANKETLIAGGPFVL  211 (369)
Q Consensus       146 ~~~~~~~v~~G~-----~gl~~~~~~~~~D~Vv~A----IvG~aGL~pt~~Ai~~gK-----~iaLANKEsLV~aG~li~  211 (369)
                      ..+.+.-|++|-     +.+.+....    -++|-    +.-+-|..|...|+.+|-     ++-..+.+  +=+|+++.
T Consensus        87 ~~~~Dlivlagy~~iL~~~~l~~~~~----~~iNiHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~--lD~G~Ii~  160 (215)
T 3da8_A           87 AHEPDLVVSAGFMRILGPQFLSRFYG----RTLNTHPALLPAFPGTHGVADALAYGVKVTGATVHLVDAG--TDTGPILA  160 (215)
T ss_dssp             TTCCSEEEEEECCSCCCHHHHHHHTT----TEEEEESSCTTSSCSTTHHHHHHHHTCSEEEEEEEECCSS--SSCSCEEE
T ss_pred             hhCCCEEEEcCchhhCCHHHHhhccC----CeEEeCcccccCCCCchHHHHHHHcCCCeEEEEEEEEcCC--CCCCCEEE
Confidence            333333444442     233333321    12221    345679999999999984     33444433  45677774


Q ss_pred             H
Q 017567          212 P  212 (369)
Q Consensus       212 ~  212 (369)
                      +
T Consensus       161 Q  161 (215)
T 3da8_A          161 Q  161 (215)
T ss_dssp             E
T ss_pred             E
Confidence            4

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=93.12  E-value=0.88  Score=40.55  Aligned_cols=64  Identities=23%  Similarity=0.157  Sum_probs=41.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCCEEE-EcCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQVVA-VRNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F---kP~~V~-v~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.  +|.+.+.+...++   .++... ..|-.+.+.+++.
T Consensus         9 ~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   76 (260)
T 2ae2_A            9 GCTALVTGGSRGIGYGIVEELASL--GASVYTCS--RNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQEL   76 (260)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence            468999999999999999988875  57777654  5666555444433   333333 2454444444443

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=93.12  E-value=0.13  Score=46.50  Aligned_cols=31  Identities=19%  Similarity=0.381  Sum_probs=27.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      |+|.|.|+||.||....+-+.+.  .++|+++.
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~   33 (315)
T 2ydy_A            3 RRVLVTGATGLLGRAVHKEFQQN--NWHAVGCG   33 (315)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTT--TCEEEEEC
T ss_pred             CeEEEECCCcHHHHHHHHHHHhC--CCeEEEEc
Confidence            57999999999999999988875  58999886

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=93.11  E-value=0.45  Score=43.56  Aligned_cols=64  Identities=16%  Similarity=0.076  Sum_probs=46.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+  .+|.+.+.+.++++..+...+ .|-.+.+.+++.
T Consensus        29 gk~vlVTGas~gIG~aia~~la~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   93 (277)
T 3gvc_A           29 GKVAIVTGAGAGIGLAVARRLADE--GCHVLCA--DIDGDAADAAATKIGCGAAACRVDVSDEQQIIAM   93 (277)
T ss_dssp             TCEEEETTTTSTHHHHHHHHHHHT--TCEEEEE--ESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHH
Confidence            368999999999999999988876  6777765  467888888888876654443 444444444443

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=93.11  E-value=0.35  Score=42.83  Aligned_cols=65  Identities=18%  Similarity=0.201  Sum_probs=42.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHH---HHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ---VKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ---~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+. ++|.+.+.+.   +++..++...+ .|-.+.+.+++.
T Consensus         4 ~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   72 (246)
T 2uvd_A            4 GKVALVTGASRGIGRAIAIDLAKQ--GANVVVNY-AGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNM   72 (246)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEE-SSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe-CCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence            368999999999999999998875  57777654 4365555444   33334444333 454444445443

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=93.11  E-value=0.59  Score=41.67  Aligned_cols=62  Identities=13%  Similarity=-0.038  Sum_probs=40.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.-.  .+. .+..++.+ +.+...|-.+.+.+++.
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~--~~~-~~~~~~~~-~~~~~~D~~~~~~~~~~   67 (256)
T 2d1y_A            6 GKGVLVTGGARGIGRAIAQAFARE--GALVALCDLR--PEG-KEVAEAIG-GAFFQVDLEDERERVRF   67 (256)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESS--TTH-HHHHHHHT-CEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCC--hhH-HHHHHHhh-CCEEEeeCCCHHHHHHH
Confidence            368999999999999999988876  5778776533  233 33334443 24444555555555544

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=93.09  E-value=0.4  Score=42.29  Aligned_cols=64  Identities=23%  Similarity=0.146  Sum_probs=42.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh---hCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR---FKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~---FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.  +|.+.+.+..++   ..++...+ .|-.+.+.+++.
T Consensus         9 ~k~vlITGas~giG~~~a~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   76 (253)
T 3qiv_A            9 NKVGIVTGSGGGIGQAYAEALARE--GAAVVVAD--INAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAM   76 (253)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEc--CCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            468999999999999999998876  57777643  566665554444   34444333 444444444443

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=93.09  E-value=0.25  Score=43.94  Aligned_cols=65  Identities=12%  Similarity=0.198  Sum_probs=41.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHH---HHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNIT---LLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~---lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      +|++.|.|+||.||..+.+-+.+.  .++|+.+. +++-+   .+.+..+++.++...+ .|-.+.+.+++.
T Consensus         7 ~k~vlVTGas~gIG~~~a~~l~~~--G~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~   75 (264)
T 3i4f_A            7 VRHALITAGTKGLGKQVTEKLLAK--GYSVTVTY-HSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKI   75 (264)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEE-SSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHH
T ss_pred             cCEEEEeCCCchhHHHHHHHHHHC--CCEEEEEc-CCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHH
Confidence            478999999999999999888876  67787654 44444   3444444444444333 454444455443

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=93.08  E-value=0.22  Score=46.81  Aligned_cols=94  Identities=17%  Similarity=0.217  Sum_probs=61.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .+|.|+|+ |.||..++.+.+..  .. +|++..  ++-+++ +.++++..+.+.-.++...   .              
T Consensus       168 ~~VlV~Ga-G~vG~~a~qla~~~--Ga~~Vi~~~--~~~~~~-~~~~~lGa~~vi~~~~~~~---~--------------  224 (352)
T 3fpc_A          168 DTVCVIGI-GPVGLMSVAGANHL--GAGRIFAVG--SRKHCC-DIALEYGATDIINYKNGDI---V--------------  224 (352)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHTT--TCSSEEEEC--CCHHHH-HHHHHHTCCEEECGGGSCH---H--------------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHc--CCcEEEEEC--CCHHHH-HHHHHhCCceEEcCCCcCH---H--------------
Confidence            57999995 99999999999876  45 577643  444554 6788898887654322211   1              


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCce
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~i  195 (369)
                        +.+.++.....+|+|++++.+-..+.-.+.+++.|-++
T Consensus       225 --~~v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~  262 (352)
T 3fpc_A          225 --EQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDI  262 (352)
T ss_dssp             --HHHHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEEEEE
T ss_pred             --HHHHHHcCCCCCCEEEECCCChHHHHHHHHHHhcCCEE
Confidence              12233333336999999876656677677766665443

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=93.07  E-value=0.12  Score=48.43  Aligned_cols=50  Identities=14%  Similarity=0.312  Sum_probs=37.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVA  130 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~  130 (369)
                      -++|.|.|++|.||..+....+..  ..+|+++.-.  -+++ +.++++..+.+.
T Consensus       170 g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~V~~~~~~--~~~~-~~~~~~g~~~~~  219 (347)
T 2hcy_A          170 GHWVAISGAAGGLGSLAVQYAKAM--GYRVLGIDGG--EGKE-ELFRSIGGEVFI  219 (347)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECS--TTHH-HHHHHTTCCEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCcEEEEcCC--HHHH-HHHHHcCCceEE
Confidence            368999999999999999999976  4688876533  3333 456677766554

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=93.04  E-value=0.54  Score=42.16  Aligned_cols=45  Identities=20%  Similarity=0.251  Sum_probs=34.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.  +|.+.+.+..+++
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~   50 (278)
T 1spx_A            6 EKVAIITGSSNGIGRATAVLFARE--GAKVTITG--RHAERLEETRQQI   50 (278)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHH
Confidence            368999999999999999988875  57887754  5667766655554

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=93.03  E-value=0.43  Score=44.55  Aligned_cols=81  Identities=11%  Similarity=0.117  Sum_probs=49.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CC--CEEE-EcCchhHHHHHHHHhcCCC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KP--QVVA-VRNESLLDEIKEALANVEE  149 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F---kP--~~V~-v~de~~~~~l~~~l~~~~~  149 (369)
                      .|+|.|.|+||.||..+.+-+.+.  .++|+++.  +|.+.+.+...++   .+  +... ..|-.+.+.+++.+.    
T Consensus         8 ~k~vlVTGas~gIG~~la~~l~~~--G~~Vv~~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~----   79 (319)
T 3ioy_A            8 GRTAFVTGGANGVGIGLVRQLLNQ--GCKVAIAD--IRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAAD----   79 (319)
T ss_dssp             TCEEEEETTTSTHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHH----
T ss_pred             CCEEEEcCCchHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHH----
Confidence            368999999999999999998875  67777653  4555555544443   22  3333 345455545554332    


Q ss_pred             CceEEecHHHHHHHhcCCCCCEEEEe
Q 017567          150 KPEILAGEQGVIEAARHPDAVTVVTG  175 (369)
Q Consensus       150 ~~~v~~G~~gl~~~~~~~~~D~Vv~A  175 (369)
                               .+.+  ....+|+||+.
T Consensus        80 ---------~~~~--~~g~id~lv~n   94 (319)
T 3ioy_A           80 ---------EVEA--RFGPVSILCNN   94 (319)
T ss_dssp             ---------HHHH--HTCCEEEEEEC
T ss_pred             ---------HHHH--hCCCCCEEEEC
Confidence                     1111  23468888886

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=93.02  E-value=0.44  Score=42.67  Aligned_cols=81  Identities=20%  Similarity=0.183  Sum_probs=51.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh---hCCCEEEE-cCchhHHHHHHHHhcCCCCc
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR---FKPQVVAV-RNESLLDEIKEALANVEEKP  151 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~---FkP~~V~v-~de~~~~~l~~~l~~~~~~~  151 (369)
                      .|++.|.|+||.||.....-+.+.  .++|+.+  .+|.+.+.+..++   ..++...+ .|-.+.+.+++.+.      
T Consensus        29 ~k~vlITGas~gIG~~la~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~------   98 (262)
T 3rkr_A           29 GQVAVVTGASRGIGAAIARKLGSL--GARVVLT--ARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFAT------   98 (262)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH------
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHH------
Confidence            368999999999999999988876  5777765  3566666555444   34443333 45555555554432      


Q ss_pred             eEEecHHHHHHHhcCCCCCEEEEe
Q 017567          152 EILAGEQGVIEAARHPDAVTVVTG  175 (369)
Q Consensus       152 ~v~~G~~gl~~~~~~~~~D~Vv~A  175 (369)
                             .+.+.  ...+|+||+.
T Consensus        99 -------~~~~~--~g~id~lv~~  113 (262)
T 3rkr_A           99 -------GVLAA--HGRCDVLVNN  113 (262)
T ss_dssp             -------HHHHH--HSCCSEEEEC
T ss_pred             -------HHHHh--cCCCCEEEEC
Confidence                   11222  2368999886

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=92.98  E-value=0.54  Score=42.28  Aligned_cols=66  Identities=17%  Similarity=0.134  Sum_probs=42.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec----------CCHHHHHH---HHHhhCCCEEEE-cCchhHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG----------SNITLLAD---QVKRFKPQVVAV-RNESLLDEIK  141 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag----------~Nv~lL~e---Q~~~FkP~~V~v-~de~~~~~l~  141 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.-.          .+.+.+.+   .+++...+...+ .|-.+.+.++
T Consensus        13 gk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   90 (278)
T 3sx2_A           13 GKVAFITGAARGQGRAHAVRLAAD--GADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLS   90 (278)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            368999999999999999988876  6788776533          23444444   444455555544 4444444444


Q ss_pred             HH
Q 017567          142 EA  143 (369)
Q Consensus       142 ~~  143 (369)
                      +.
T Consensus        91 ~~   92 (278)
T 3sx2_A           91 AA   92 (278)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}

Probab=92.95  E-value=0.77  Score=42.33  Aligned_cols=133  Identities=18%  Similarity=0.179  Sum_probs=81.7

Q ss_pred             CCCeeEEEEe-cCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCch-----h-HHHHHHHHhc
Q 017567           74 DGPKPISVLG-STGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNES-----L-LDEIKEALAN  146 (369)
Q Consensus        74 ~~~kkI~ILG-STGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~-----~-~~~l~~~l~~  146 (369)
                      +.|+||++++ .||+.....|+-+.+..-.++|+++..++--....+.|+++.-.+..+..++     . -+++.+.|..
T Consensus        20 ~~~~rI~~l~SG~g~~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~   99 (229)
T 3auf_A           20 GHMIRIGVLISGSGTNLQAILDGCREGRIPGRVAVVISDRADAYGLERARRAGVDALHMDPAAYPSRTAFDAALAERLQA   99 (229)
T ss_dssp             TTCEEEEEEESSCCHHHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTTCEEEECCGGGSSSHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcCCCEEEECcccccchhhccHHHHHHHHh
Confidence            4467999996 5788888888888765446899999887533345677888887666543221     1 1234444444


Q ss_pred             CCCCceEEecH-----HHHHHHhcCCCCCEEEE----eccCccCcHHHHHHHHcCCc-----eeeecccceeecccchhH
Q 017567          147 VEEKPEILAGE-----QGVIEAARHPDAVTVVT----GIVGCAGLKPTVAAIEAGKD-----IALANKETLIAGGPFVLP  212 (369)
Q Consensus       147 ~~~~~~v~~G~-----~gl~~~~~~~~~D~Vv~----AIvG~aGL~pt~~Ai~~gK~-----iaLANKEsLV~aG~li~~  212 (369)
                      .+.+.-|++|-     +.+.+....    -++|    -+.-+-|..|...||.+|.+     |-..+++  +=+|+++.+
T Consensus       100 ~~~Dliv~agy~~IL~~~~l~~~~~----~~iNiHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~--~D~G~Ii~Q  173 (229)
T 3auf_A          100 YGVDLVCLAGYMRLVRGPMLTAFPN----RILNIHPSLLPAFPGLEAQRQALEHGVKVAGCTVHFVTAG--VDEGPIILQ  173 (229)
T ss_dssp             TTCSEEEESSCCSCCCHHHHHHSTT----CEEEEESSCTTSSCSSCHHHHHHHHTCSEEEEEEEECCSS--TTCSCEEEE
T ss_pred             cCCCEEEEcChhHhCCHHHHhhccC----CEEEEccCcCcCCCCcCHHHHHHHcCCCeEEEEEEEECCC--CcCCCEEEE
Confidence            44445555554     334443321    2333    24567899999999999853     3444533  445677644

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=92.94  E-value=0.5  Score=43.57  Aligned_cols=64  Identities=22%  Similarity=0.205  Sum_probs=42.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCCEEE-EcCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQVVA-VRNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F---kP~~V~-v~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+  .+|.+.+.+..+++   ..+... ..|-.+.+.+++.
T Consensus        31 gk~vlVTGas~gIG~~la~~l~~~--G~~V~~~--~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~   98 (301)
T 3tjr_A           31 GRAAVVTGGASGIGLATATEFARR--GARLVLS--DVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRL   98 (301)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence            368999999999999999998876  5777764  35666666655544   334333 3454544445443

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=92.93  E-value=0.46  Score=42.29  Aligned_cols=63  Identities=16%  Similarity=0.077  Sum_probs=40.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHH---HHhhCCCEEEE-cCchhHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ---VKRFKPQVVAV-RNESLLDEIKE  142 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ---~~~FkP~~V~v-~de~~~~~l~~  142 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.  +|.+.+.+.   +++...+...+ .|-.+.+.+++
T Consensus        14 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~   80 (260)
T 2zat_A           14 NKVALVTASTDGIGLAIARRLAQD--GAHVVVSS--RKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRER   80 (260)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence            368999999999999999988876  57787754  455555443   33334444332 44444444444

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=92.91  E-value=0.8  Score=40.69  Aligned_cols=64  Identities=17%  Similarity=0.153  Sum_probs=41.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F---kP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||-||..+..-+.+.  .++|+.+.  +|.+.+.+..+++   ..+...+ .|-.+.+.+++.
T Consensus         7 ~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~--r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~   74 (247)
T 2jah_A            7 GKVALITGASSGIGEATARALAAE--GAAVAIAA--RRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAA   74 (247)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            368999999999999999988876  57777653  4556655444433   4444333 454444444443

>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*

Probab=92.90  E-value=0.49  Score=46.19  Aligned_cols=112  Identities=14%  Similarity=0.190  Sum_probs=67.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCC-CceEEEEEeecCCHHHHHHHHHh------hCCCEEEEcCchhHHHHHHHHhcCCC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHE-DKFRVVALAAGSNITLLADQVKR------FKPQVVAVRNESLLDEIKEALANVEE  149 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~p-d~F~VvaLaag~Nv~lL~eQ~~~------FkP~~V~v~de~~~~~l~~~l~~~~~  149 (369)
                      .||+|.|+ |-||+..++.+.++. ..++|+++.--...+.++.+.+-      |..+ |...++..       +.-.+.
T Consensus         2 ikVgInG~-G~IGr~llR~l~~~~~p~~eivaInd~~~~~~~a~ll~sds~~G~~~~~-v~~~~~~~-------l~v~g~   72 (337)
T 1rm4_O            2 LKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDAD-VKTAGDSA-------ISVDGK   72 (337)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTCSSCSEEEEEEECTTCHHHHHHHHHCCTTTCSCSSC-EEECTTSE-------EEETTE
T ss_pred             eEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEEEcCCCHHHHHHHhcccccCCCccce-eEEecCCe-------EEECCe
Confidence            48999999 999999999999872 35999999876677777776653      2111 11111100       000011


Q ss_pred             CceEEecHHHHHHH-hcCCCCCEEEEeccCccCcHHHHHHHHcC-Cceeee
Q 017567          150 KPEILAGEQGVIEA-ARHPDAVTVVTGIVGCAGLKPTVAAIEAG-KDIALA  198 (369)
Q Consensus       150 ~~~v~~G~~gl~~~-~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~g-K~iaLA  198 (369)
                      .+.++.-.+ ..++ ....++|+|+.+.-.+...+-.-..+++| |.|-+.
T Consensus        73 ~i~v~~~~d-p~~i~w~~~gvDiV~eatg~~~s~e~a~~~l~~Gak~V~iS  122 (337)
T 1rm4_O           73 VIKVVSDRN-PVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLIT  122 (337)
T ss_dssp             EEEEECCSC-GGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEES
T ss_pred             EEEEEecCC-hhhCcccccCCCEEEECCCchhhHHHHHHHHHcCCEEEEEC
Confidence            122222111 1111 11115899999988888888888889998 445443

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=92.90  E-value=0.78  Score=39.97  Aligned_cols=83  Identities=13%  Similarity=0.121  Sum_probs=48.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCc---e--EEEEEeecCCHHHHHHHHHhh---CCCEEEE-cCchhHHHHHHHHhc
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDK---F--RVVALAAGSNITLLADQVKRF---KPQVVAV-RNESLLDEIKEALAN  146 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~---F--~VvaLaag~Nv~lL~eQ~~~F---kP~~V~v-~de~~~~~l~~~l~~  146 (369)
                      .|+|.|.|+||.||..+.+-+.+....   |  +|+.+.  +|.+.+.+...++   ..+...+ .|-.+.+.+++.+. 
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~-   78 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSS--RTAADLEKISLECRAEGALTDTITADISDMADVRRLTT-   78 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEE--SCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHH-
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEe--CCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHH-
Confidence            368999999999999999888765221   1  566543  4555555444443   3333332 44444444444321 


Q ss_pred             CCCCceEEecHHHHHHHhcCCCCCEEEEe
Q 017567          147 VEEKPEILAGEQGVIEAARHPDAVTVVTG  175 (369)
Q Consensus       147 ~~~~~~v~~G~~gl~~~~~~~~~D~Vv~A  175 (369)
                                  .+.+  ....+|+||+.
T Consensus        79 ------------~~~~--~~g~id~li~~   93 (244)
T 2bd0_A           79 ------------HIVE--RYGHIDCLVNN   93 (244)
T ss_dssp             ------------HHHH--HTSCCSEEEEC
T ss_pred             ------------HHHH--hCCCCCEEEEc
Confidence                        1111  23468999986

>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*

Probab=92.89  E-value=0.79  Score=44.56  Aligned_cols=107  Identities=18%  Similarity=0.174  Sum_probs=65.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHh---CCCceEEEEEeecCCHHHHHHHHH--hhCCCE---EEEcCchhHHHHHHHHhcCC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAE---HEDKFRVVALAAGSNITLLADQVK--RFKPQV---VAVRNESLLDEIKEALANVE  148 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~---~pd~F~VvaLaag~Nv~lL~eQ~~--~FkP~~---V~v~de~~~~~l~~~l~~~~  148 (369)
                      .||+|.|. |-||...++.+.+   +|+ |+|+++......+.++...+  .-.+++   +...+..        +.-.+
T Consensus         3 ikVgI~G~-G~iGr~l~r~l~~~~~~~~-~eivai~~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~--------l~v~g   72 (339)
T 2x5j_O            3 VRVAINGF-GRIGRNVVRALYESGRRAE-ITVVAINELADAAGMAHLLKYDTSHGRFAWEVRQERDQ--------LFVGD   72 (339)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTSGGGT-EEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTE--------EEETT
T ss_pred             eEEEEECc-CHHHHHHHHHHHcCCCCCC-EEEEEEeCCCCHHHHHHHhcccccCCCCCceEEEcCCe--------eEECC
Confidence            58999998 9999999999998   764 99999987667777766664  222221   1111100        00000


Q ss_pred             CCceEEecHHHHHHH-hcCCCCCEEEEeccCccCcHHHHHHHHcCCc
Q 017567          149 EKPEILAGEQGVIEA-ARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (369)
Q Consensus       149 ~~~~v~~G~~gl~~~-~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~  194 (369)
                      ..+.++.-. ...++ ....++|+|+.+.-.+...+-.-..+++|.+
T Consensus        73 ~~i~v~~~~-dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~~Gak  118 (339)
T 2x5j_O           73 DAIRVLHER-SLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAK  118 (339)
T ss_dssp             EEEEEECCS-SGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHHTTCS
T ss_pred             EEEEEEecC-ChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCC
Confidence            112222110 11111 0111689999998888888777788899854

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=92.85  E-value=0.15  Score=47.59  Aligned_cols=52  Identities=12%  Similarity=0.213  Sum_probs=40.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV  131 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v  131 (369)
                      +||.|.|+||+||...++-+.+... ++|+++.-..+.+.|.+.++.  ++.|.-
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~-~~v~~~d~~~d~~~l~~~~~~--~d~Vih   52 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTD-HHIFEVHRQTKEEELESALLK--ADFIVH   52 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCC-CEEEECCTTCCHHHHHHHHHH--CSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC-CEEEEECCCCCHHHHHHHhcc--CCEEEE
Confidence            3799999999999999999887632 478877654688888887774  677664

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=92.85  E-value=0.7  Score=41.80  Aligned_cols=66  Identities=21%  Similarity=0.159  Sum_probs=45.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC--------CHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS--------NITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~--------Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.-..        ..+.+.+.+++...+...+ .|-.+.+.+++.
T Consensus         6 ~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   80 (274)
T 3e03_A            6 GKTLFITGASRGIGLAIALRAARD--GANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAA   80 (274)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHH
T ss_pred             CcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence            468999999999999999988876  57777654332        2566777777776665544 444444444443

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=92.84  E-value=0.61  Score=44.91  Aligned_cols=95  Identities=14%  Similarity=0.129  Sum_probs=60.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .+|.|+|+ |.||..++.+.+..  .. +|++..  .+-+++ +.++++..+.+.-.++...   .              
T Consensus       215 ~~VlV~Ga-G~vG~~aiqlak~~--Ga~~Vi~~~--~~~~~~-~~~~~lGa~~vi~~~~~~~---~--------------  271 (404)
T 3ip1_A          215 DNVVILGG-GPIGLAAVAILKHA--GASKVILSE--PSEVRR-NLAKELGADHVIDPTKENF---V--------------  271 (404)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT--TCSEEEEEC--SCHHHH-HHHHHHTCSEEECTTTSCH---H--------------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHc--CCCEEEEEC--CCHHHH-HHHHHcCCCEEEcCCCCCH---H--------------
Confidence            58999998 99999999999986  56 677654  344444 5778898887764332221   1              


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCcc-CcHHHHHHH----HcCCcee
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCA-GLKPTVAAI----EAGKDIA  196 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~a-GL~pt~~Ai----~~gK~ia  196 (369)
                        +.+.++.....+|+|++++.+-. -+...+.++    +.|-++.
T Consensus       272 --~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv  315 (404)
T 3ip1_A          272 --EAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVA  315 (404)
T ss_dssp             --HHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEE
T ss_pred             --HHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEE
Confidence              12233333346999999876652 344455666    5554433

>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*

Probab=92.82  E-value=0.19  Score=47.63  Aligned_cols=88  Identities=10%  Similarity=0.089  Sum_probs=58.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      +.||+|+|+ |.||+..+..+.++| .++++++...+.-..+.     +.   +.                      ++ 
T Consensus         3 ~irV~IiG~-G~mG~~~~~~l~~~~-~~elvav~d~~~~~~~~-----~g---v~----------------------~~-   49 (320)
T 1f06_A            3 NIRVAIVGY-GNLGRSVEKLIAKQP-DMDLVGIFSRRATLDTK-----TP---VF----------------------DV-   49 (320)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHTTCS-SEEEEEEEESSSCCSSS-----SC---EE----------------------EG-
T ss_pred             CCEEEEEee-cHHHHHHHHHHhcCC-CCEEEEEEcCCHHHhhc-----CC---Cc----------------------ee-
Confidence            468999995 999999999999876 59999987643111110     11   11                      11 


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecc
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANK  200 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANK  200 (369)
                        +.+.++.  .++|+|+.+..-..-+.-..+++++||.+.....
T Consensus        50 --~d~~~ll--~~~DvViiatp~~~h~~~~~~al~aG~~Vv~ekp   90 (320)
T 1f06_A           50 --ADVDKHA--DDVDVLFLCMGSATDIPEQAPKFAQFACTVDTYD   90 (320)
T ss_dssp             --GGGGGTT--TTCSEEEECSCTTTHHHHHHHHHTTTSEEECCCC
T ss_pred             --CCHHHHh--cCCCEEEEcCCcHHHHHHHHHHHHCCCEEEECCC
Confidence              1122333  4688888887666666777888888887766543

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=92.81  E-value=0.61  Score=42.38  Aligned_cols=63  Identities=13%  Similarity=0.151  Sum_probs=45.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKE  142 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~  142 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+  .+|.+.+.+..+++..+...+ .|-.+.+.+++
T Consensus        16 gk~vlVTGas~gIG~~~a~~L~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~   79 (291)
T 3rd5_A           16 QRTVVITGANSGLGAVTARELARR--GATVIMA--VRDTRKGEAAARTMAGQVEVRELDLQDLSSVRR   79 (291)
T ss_dssp             TCEEEEECCSSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHH
Confidence            368999999999999999999876  5777764  467888888887776554443 34444444444

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=92.80  E-value=0.35  Score=44.38  Aligned_cols=32  Identities=13%  Similarity=0.341  Sum_probs=27.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      |+|.|.|+||.||....+-+.+.  .++|+++.-
T Consensus        21 ~~vlVTGasG~iG~~l~~~L~~~--g~~V~~~~r   52 (330)
T 2pzm_A           21 MRILITGGAGCLGSNLIEHWLPQ--GHEILVIDN   52 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHGGG--TCEEEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEEC
Confidence            57999999999999999988875  588988764

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=92.79  E-value=0.11  Score=44.52  Aligned_cols=37  Identities=27%  Similarity=0.375  Sum_probs=30.4

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHH
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLA  118 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~  118 (369)
                      ||.|+|+||.||....+-+.+.  .++|++++  ++-+.+.
T Consensus         2 kilVtGatG~iG~~l~~~L~~~--g~~V~~~~--R~~~~~~   38 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRR--GHEVLAVV--RDPQKAA   38 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHH
T ss_pred             EEEEEcCCCHHHHHHHHHHHHC--CCEEEEEE--ecccccc
Confidence            6999999999999999998876  58898875  4555554

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=92.79  E-value=0.28  Score=45.63  Aligned_cols=32  Identities=19%  Similarity=0.306  Sum_probs=27.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      |+|.|.|+||.||....+-+.+.  .++|+++.-
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r   56 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEK--GYEVHGIVR   56 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEEC
T ss_pred             cEEEEECCCchHHHHHHHHHHHC--CCEEEEEEC
Confidence            78999999999999999988875  578888764

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=92.75  E-value=0.25  Score=44.10  Aligned_cols=61  Identities=15%  Similarity=0.040  Sum_probs=39.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec-CCHHHHHHHHHhhCCCEEEEcCchhHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-SNITLLADQVKRFKPQVVAVRNESLLDEI  140 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag-~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l  140 (369)
                      ||++.|.|+||.||..+..-+.+.  .++|+.+.-. ...+.+.+ +++...+...+ |++..+.+
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~-l~~~~~~~~~~-d~~~v~~~   62 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEA--GHTVACHDESFKQKDELEA-FAETYPQLKPM-SEQEPAEL   62 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHT--TCEEEECCGGGGSHHHHHH-HHHHCTTSEEC-CCCSHHHH
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH-HHhcCCcEEEE-CHHHHHHH
Confidence            478999999999999999998876  6777765422 23344444 44445555544 55544433

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=92.75  E-value=0.41  Score=44.47  Aligned_cols=97  Identities=14%  Similarity=0.124  Sum_probs=64.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      ++|.|.|+ |++|..++.+.+..  ..+++..+ ..+-+++ +.++++..+.+.-..+....+....+            
T Consensus       162 ~~VlV~Ga-G~vG~~aiq~ak~~--G~~~vi~~-~~~~~k~-~~a~~lGa~~~i~~~~~~~~~~~~~~------------  224 (346)
T 4a2c_A          162 KNVIIIGA-GTIGLLAIQCAVAL--GAKSVTAI-DISSEKL-ALAKSFGAMQTFNSSEMSAPQMQSVL------------  224 (346)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHT--TCSEEEEE-ESCHHHH-HHHHHTTCSEEEETTTSCHHHHHHHH------------
T ss_pred             CEEEEECC-CCcchHHHHHHHHc--CCcEEEEE-echHHHH-HHHHHcCCeEEEeCCCCCHHHHHHhh------------
Confidence            57999998 99999999999986  33333322 3444554 67899999988876655544443332            


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceee
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIAL  197 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaL  197 (369)
                             .....+|.|+++..+-..+.-.+.+++.|-++.+
T Consensus       225 -------~~~~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~  258 (346)
T 4a2c_A          225 -------RELRFNQLILETAGVPQTVELAVEIAGPHAQLAL  258 (346)
T ss_dssp             -------GGGCSSEEEEECSCSHHHHHHHHHHCCTTCEEEE
T ss_pred             -------cccCCcccccccccccchhhhhhheecCCeEEEE
Confidence                   2233578888886555556666666666665543

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=92.70  E-value=0.79  Score=41.81  Aligned_cols=66  Identities=20%  Similarity=0.196  Sum_probs=45.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC--------CHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS--------NITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~--------Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.-..        ..+.+.+.+++..++...+ .|-.+.+.+++.
T Consensus         9 ~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   83 (285)
T 3sc4_A            9 GKTMFISGGSRGIGLAIAKRVAAD--GANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAA   83 (285)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHTT--TCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            468999999999999999988876  67787765332        3566677777776665554 344444445443

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=92.68  E-value=0.7  Score=43.38  Aligned_cols=94  Identities=17%  Similarity=0.126  Sum_probs=61.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcC--chhHHHHHHHHhcCCCCceEE
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRN--ESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~d--e~~~~~l~~~l~~~~~~~~v~  154 (369)
                      ++|.|.|+ |.||..++.+.+..  ..+|++..  ++-+++ +.++++..+.+.-.+  ++..+.+++            
T Consensus       170 ~~VlV~Ga-G~vG~~a~qla~~~--Ga~Vi~~~--~~~~~~-~~~~~lGa~~~~~~~~~~~~~~~i~~------------  231 (352)
T 1e3j_A          170 TTVLVIGA-GPIGLVSVLAAKAY--GAFVVCTA--RSPRRL-EVAKNCGADVTLVVDPAKEEESSIIE------------  231 (352)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT--TCEEEEEE--SCHHHH-HHHHHTTCSEEEECCTTTSCHHHHHH------------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHc--CCEEEEEc--CCHHHH-HHHHHhCCCEEEcCcccccHHHHHHH------------
Confidence            58999997 99999999999986  45676654  344444 456788887665433  222333332            


Q ss_pred             ecHHHHHHHhc---CCCCCEEEEeccCccCcHHHHHHHHcCCcee
Q 017567          155 AGEQGVIEAAR---HPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (369)
Q Consensus       155 ~G~~gl~~~~~---~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~ia  196 (369)
                              ...   ...+|+|+++..+-..+.-.+.+++.|-++.
T Consensus       232 --------~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv  268 (352)
T 1e3j_A          232 --------RIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLM  268 (352)
T ss_dssp             --------HHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEE
T ss_pred             --------HhccccCCCCCEEEECCCCHHHHHHHHHHHhcCCEEE
Confidence                    221   2359999999765555666666666665544

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=92.68  E-value=1  Score=41.06  Aligned_cols=64  Identities=17%  Similarity=0.130  Sum_probs=41.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh----CCCEEEE-cCchhHHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF----KPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F----kP~~V~v-~de~~~~~l~~~  143 (369)
                      |++.|.|+||.||..+.+-+.+.  .++|+.+ +.++.+.+.+...+.    ..+...+ .|-.+.+.+++.
T Consensus        26 k~~lVTGas~GIG~~ia~~la~~--G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   94 (281)
T 3v2h_A           26 KTAVITGSTSGIGLAIARTLAKA--GANIVLN-GFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADM   94 (281)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHT--TCEEEEE-CCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEE-eCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHH
Confidence            68999999999999999988876  5677654 444555555444433    3344443 344444444443

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=92.65  E-value=0.47  Score=44.67  Aligned_cols=66  Identities=20%  Similarity=0.203  Sum_probs=43.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe---ecCCHHHH---HHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA---AGSNITLL---ADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa---ag~Nv~lL---~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+..-+.+.  .++|++.+   .++|.+.+   .+.+++..++...+ .|-.+.+.+++.
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~--G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~   77 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGA--GHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRA   77 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHH
Confidence            368999999999999999998876  68888864   34555544   44445555555444 344444444443

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=92.65  E-value=0.96  Score=40.29  Aligned_cols=45  Identities=22%  Similarity=0.224  Sum_probs=33.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|.+.+.+.++++
T Consensus        12 ~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~   56 (252)
T 3f1l_A           12 DRIILVTGASDGIGREAAMTYARY--GATVILLG--RNEEKLRQVASHI   56 (252)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHH
Confidence            468999999999999999988876  57776643  5666665555443

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=92.63  E-value=0.31  Score=41.21  Aligned_cols=59  Identities=17%  Similarity=0.181  Sum_probs=37.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKE  142 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~  142 (369)
                      |++.|.|+||.||....+-+.+.    +|+++  .+|.+.+.+...+.+- .+...|-.+.+.+++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~----~V~~~--~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~   59 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH----DLLLS--GRRAGALAELAREVGA-RALPADLADELEAKA   59 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS----EEEEE--CSCHHHHHHHHHHHTC-EECCCCTTSHHHHHH
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC----CEEEE--ECCHHHHHHHHHhccC-cEEEeeCCCHHHHHH
Confidence            57999999999999887776654    67665  3566777666655543 333344444434443

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=92.59  E-value=0.25  Score=48.69  Aligned_cols=38  Identities=16%  Similarity=0.246  Sum_probs=32.0

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC
Q 017567           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN  113 (369)
Q Consensus        74 ~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~N  113 (369)
                      ..+++|.|.|+||+||...++-+.  ...++|++++=+.+
T Consensus       148 ~~~~~VLVTGatG~iG~~l~~~L~--~~g~~V~~l~R~~~  185 (508)
T 4f6l_B          148 RPLGNTLLTGATGFLGAYLIEALQ--GYSHRIYCFIRADN  185 (508)
T ss_dssp             CCCEEEEESCTTSHHHHHHHHHTB--TTEEEEEEEEESSS
T ss_pred             CCCCeEEEECCccchHHHHHHHHH--hcCCEEEEEECCCC
Confidence            446899999999999999999884  45799999976655

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=92.58  E-value=0.58  Score=42.25  Aligned_cols=66  Identities=14%  Similarity=0.195  Sum_probs=43.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec-----------CCHHHHHHHH---HhhCCCEEEE-cCchhHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-----------SNITLLADQV---KRFKPQVVAV-RNESLLDEI  140 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag-----------~Nv~lL~eQ~---~~FkP~~V~v-~de~~~~~l  140 (369)
                      .|++.|.|+||-||..+..-+.+.  .++|+.+.-.           ++.+.+.+.+   .+..++...+ .|-.+.+.+
T Consensus        11 ~k~~lVTGas~GIG~a~a~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (277)
T 3tsc_A           11 GRVAFITGAARGQGRAHAVRMAAE--GADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL   88 (277)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             CCEEEEECCccHHHHHHHHHHHHc--CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            468999999999999999998876  6778776421           2555555444   4445555444 455555555


Q ss_pred             HHH
Q 017567          141 KEA  143 (369)
Q Consensus       141 ~~~  143 (369)
                      ++.
T Consensus        89 ~~~   91 (277)
T 3tsc_A           89 RKV   91 (277)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            554

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=92.58  E-value=0.53  Score=42.80  Aligned_cols=64  Identities=20%  Similarity=0.238  Sum_probs=42.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F---kP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|.+.+.+.++++   ..+...+ .|-.+.+.+++.
T Consensus        24 ~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~--r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~   91 (279)
T 3sju_A           24 PQTAFVTGVSSGIGLAVARTLAAR--GIAVYGCA--RDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAA   91 (279)
T ss_dssp             -CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            478999999999999999988876  67776543  5666655554443   4444443 454445555543

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=92.53  E-value=0.32  Score=45.05  Aligned_cols=50  Identities=6%  Similarity=0.046  Sum_probs=37.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVA  130 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~  130 (369)
                      -++|.|.|++|.||..+....+..  ..+|++..  +|-+++ +.++++..+.+.
T Consensus       141 g~~vlV~Ga~ggiG~~~~~~a~~~--G~~V~~~~--~~~~~~-~~~~~~g~~~~~  190 (327)
T 1qor_A          141 DEQFLFHAAAGGVGLIACQWAKAL--GAKLIGTV--GTAQKA-QSALKAGAWQVI  190 (327)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHH--TCEEEEEE--SSHHHH-HHHHHHTCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEe--CCHHHH-HHHHHcCCCEEE
Confidence            468999999999999999999976  46787765  344444 445667766654

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=92.51  E-value=0.74  Score=41.31  Aligned_cols=82  Identities=15%  Similarity=0.149  Sum_probs=51.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh---hCCCEEEE-cCchhHHHHHHHHhcCCCCc
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR---FKPQVVAV-RNESLLDEIKEALANVEEKP  151 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~---FkP~~V~v-~de~~~~~l~~~l~~~~~~~  151 (369)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+  .+|.+.+.+..++   ...+...+ .|-.+.+.+++.+.      
T Consensus        11 ~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~------   80 (264)
T 3ucx_A           11 DKVVVISGVGPALGTTLARRCAEQ--GADLVLA--ARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVD------   80 (264)
T ss_dssp             TCEEEEESCCTTHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH------
T ss_pred             CcEEEEECCCcHHHHHHHHHHHHC--cCEEEEE--eCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH------
Confidence            468999999999999999988876  6777664  3566665554444   44444443 45444444544332      


Q ss_pred             eEEecHHHHHHHhcCCCCCEEEEec
Q 017567          152 EILAGEQGVIEAARHPDAVTVVTGI  176 (369)
Q Consensus       152 ~v~~G~~gl~~~~~~~~~D~Vv~AI  176 (369)
                             .+.  .+...+|++|+..
T Consensus        81 -------~~~--~~~g~id~lv~nA   96 (264)
T 3ucx_A           81 -------ETM--KAYGRVDVVINNA   96 (264)
T ss_dssp             -------HHH--HHTSCCSEEEECC
T ss_pred             -------HHH--HHcCCCcEEEECC
Confidence                   111  1234689999863

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=92.50  E-value=0.49  Score=44.52  Aligned_cols=99  Identities=16%  Similarity=0.204  Sum_probs=58.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceE-EEEEeecCCHHHHHHHHHhhCCCEEEEc-CchhHHHHHHHHhcCCCCceEE
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFR-VVALAAGSNITLLADQVKRFKPQVVAVR-NESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~-VvaLaag~Nv~lL~eQ~~~FkP~~V~v~-de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      .+|.|+|+ |.||..++.+.+..  ..+ |++...  +-+++ +.++++-+..+... +....+.+.+.           
T Consensus       181 ~~VlV~Ga-G~vG~~aiqlak~~--Ga~~Vi~~~~--~~~~~-~~a~~l~~~~~~~~~~~~~~~~~~~~-----------  243 (363)
T 3m6i_A          181 DPVLICGA-GPIGLITMLCAKAA--GACPLVITDI--DEGRL-KFAKEICPEVVTHKVERLSAEESAKK-----------  243 (363)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHT--TCCSEEEEES--CHHHH-HHHHHHCTTCEEEECCSCCHHHHHHH-----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHc--CCCEEEEECC--CHHHH-HHHHHhchhcccccccccchHHHHHH-----------
Confidence            57999998 99999999999986  455 666543  33443 45566622332221 11111222221           


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceee
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIAL  197 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaL  197 (369)
                           +.++.....+|+|+++..|-..+...+.+++.|=++.+
T Consensus       244 -----v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~  281 (363)
T 3m6i_A          244 -----IVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFV  281 (363)
T ss_dssp             -----HHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEE
T ss_pred             -----HHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEE
Confidence                 22333334699999987665567777777776655543

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=92.48  E-value=0.62  Score=41.66  Aligned_cols=64  Identities=19%  Similarity=0.102  Sum_probs=41.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh---hCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR---FKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~---FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|.+.+.+..++   ...+...+ .|-.+.+.+++.
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   74 (262)
T 1zem_A            7 GKVCLVTGAGGNIGLATALRLAEE--GTAIALLD--MNREALEKAEASVREKGVEARSYVCDVTSEEAVIGT   74 (262)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Confidence            368999999999999999998876  57777653  455555544443   34444333 454444445443

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=92.46  E-value=0.55  Score=41.51  Aligned_cols=36  Identities=8%  Similarity=0.127  Sum_probs=28.7

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCC-ceEEEEEee
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHED-KFRVVALAA  110 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd-~F~VvaLaa  110 (369)
                      .+|++.|.|+||.||....+-+.+... .++|+.+.-
T Consensus        20 ~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r   56 (267)
T 1sny_A           20 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCR   56 (267)
T ss_dssp             CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEES
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEec
Confidence            346899999999999999998887632 278887653

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=92.46  E-value=0.36  Score=44.38  Aligned_cols=34  Identities=24%  Similarity=0.397  Sum_probs=28.3

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      .+++|.|.|+||.||....+-+.+.  .++|+++.-
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r   53 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLER--GDKVVGIDN   53 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEEC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHC--CCEEEEEEC
Confidence            3468999999999999999988875  588998863

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=92.45  E-value=0.11  Score=48.23  Aligned_cols=35  Identities=23%  Similarity=0.395  Sum_probs=29.5

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      .+|+|.|.|+||+||...++-+.+.+ .++|+++.-
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~~~-g~~V~~~~r   57 (372)
T 3slg_A           23 KAKKVLILGVNGFIGHHLSKRILETT-DWEVFGMDM   57 (372)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHS-SCEEEEEES
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCC-CCEEEEEeC
Confidence            35789999999999999999887653 489999874

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=92.45  E-value=0.6  Score=42.13  Aligned_cols=66  Identities=9%  Similarity=0.053  Sum_probs=42.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC----------CH---HHHHHHHHhhCCCEEEE-cCchhHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS----------NI---TLLADQVKRFKPQVVAV-RNESLLDEIK  141 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~----------Nv---~lL~eQ~~~FkP~~V~v-~de~~~~~l~  141 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.-..          +.   +.+.+.+++..++...+ .|-.+.+.++
T Consensus        10 ~k~~lVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   87 (281)
T 3s55_A           10 GKTALITGGARGMGRSHAVALAEA--GADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALE   87 (281)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            468999999999999999988876  57777654321          13   34444455555665554 3444444444


Q ss_pred             HH
Q 017567          142 EA  143 (369)
Q Consensus       142 ~~  143 (369)
                      +.
T Consensus        88 ~~   89 (281)
T 3s55_A           88 SF   89 (281)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=92.45  E-value=0.23  Score=45.63  Aligned_cols=34  Identities=24%  Similarity=0.414  Sum_probs=27.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCC---CceEEEEEee
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHE---DKFRVVALAA  110 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~p---d~F~VvaLaa  110 (369)
                      |+|.|.|+||+||...++-+.+..   +.++|+++.-
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r   38 (364)
T 2v6g_A            2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVAR   38 (364)
T ss_dssp             EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEES
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeC
Confidence            689999999999999998887642   1289999864

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=92.44  E-value=0.66  Score=41.51  Aligned_cols=64  Identities=13%  Similarity=0.097  Sum_probs=41.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh---h--C-CCEE-EEcCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR---F--K-PQVV-AVRNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~---F--k-P~~V-~v~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+  .+|.+.+.+..++   .  . .+.. ...|-.+.+.+++.
T Consensus         7 ~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   77 (250)
T 3nyw_A            7 KGLAIITGASQGIGAVIAAGLATD--GYRVVLI--ARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTE   77 (250)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHH--TCEEEEE--ESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHH
Confidence            468999999999999999988875  5777765  3566655544443   2  1 2332 33455555555543

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=92.44  E-value=0.64  Score=41.78  Aligned_cols=64  Identities=19%  Similarity=0.207  Sum_probs=42.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---C-CCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---K-PQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F---k-P~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+  .+|.+.+.+...++   . .+...+ .|-.+.+.+++.
T Consensus        10 ~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~--~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~   78 (262)
T 3pk0_A           10 GRSVVVTGGTKGIGRGIATVFARA--GANVAVA--GRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDAL   78 (262)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHH
Confidence            468999999999999999988876  5777765  35666665555544   2 333333 444444444443

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=92.42  E-value=0.66  Score=41.94  Aligned_cols=66  Identities=20%  Similarity=0.187  Sum_probs=43.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee--------------cCCHHHHHHHHH---hhCCCEEEE-cCchhH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA--------------GSNITLLADQVK---RFKPQVVAV-RNESLL  137 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa--------------g~Nv~lL~eQ~~---~FkP~~V~v-~de~~~  137 (369)
                      .|.+.|.|+||.||..+..-+.+.  .++|+.+.-              .++.+.+.+.+.   ...++...+ .|-.+.
T Consensus        11 ~k~~lVTGas~gIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   88 (286)
T 3uve_A           11 GKVAFVTGAARGQGRSHAVRLAQE--GADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY   88 (286)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence            468999999999999999998876  677877642              234566555444   444555443 454444


Q ss_pred             HHHHHH
Q 017567          138 DEIKEA  143 (369)
Q Consensus       138 ~~l~~~  143 (369)
                      +.+++.
T Consensus        89 ~~v~~~   94 (286)
T 3uve_A           89 DALKAA   94 (286)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            445443

>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*

Probab=92.42  E-value=0.71  Score=45.22  Aligned_cols=112  Identities=17%  Similarity=0.151  Sum_probs=70.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCC--CceEEEEEeecCCHHHHHHHHH------hhCCCEEEEcCchhHHHHHHHHhcCC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHE--DKFRVVALAAGSNITLLADQVK------RFKPQVVAVRNESLLDEIKEALANVE  148 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~p--d~F~VvaLaag~Nv~lL~eQ~~------~FkP~~V~v~de~~~~~l~~~l~~~~  148 (369)
                      .||+|.|. |-||+..++.+.++.  ++|+|||+..-...+.|+.+.+      +|+- -|...+..        +.-.+
T Consensus         2 ikVaInGf-GrIGr~v~r~l~~~~~~~~~evvaInd~~~~~~~a~ll~ydS~hg~f~~-~v~~~~~~--------l~v~g   71 (335)
T 1obf_O            2 IRVAINGY-GRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPG-TVSVNGSY--------MVVNG   71 (335)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHHEETTTEECSS-CEEEETTE--------EEETT
T ss_pred             cEEEEECC-CHHHHHHHHHHHhcCCCCCcEEEEEeCCCCHHHHHHHhccCCcCCCCCC-CEEEeCCE--------EEECC
Confidence            48999999 999999999988873  5799999987667777766654      2221 22221110        10001


Q ss_pred             CCceEEecHHHHHHH-hcCCCCCEEEEeccCccCcHHHHHHHHcC-Cceeeec
Q 017567          149 EKPEILAGEQGVIEA-ARHPDAVTVVTGIVGCAGLKPTVAAIEAG-KDIALAN  199 (369)
Q Consensus       149 ~~~~v~~G~~gl~~~-~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~g-K~iaLAN  199 (369)
                      ..++++.-. ...++ -...++|+|+.+.-++...+-.-.++++| |++.+.|
T Consensus        72 ~~i~v~~~~-dp~~~~w~~~gvDiV~estG~f~s~e~a~~h~~aGakkVviSa  123 (335)
T 1obf_O           72 DKIRVDANR-NPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISA  123 (335)
T ss_dssp             EEEEEECCS-CGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESS
T ss_pred             EEEEEEEcC-CcccCCccccCCCEEEEccCccccHHHHHHHHHcCCCEEEECC
Confidence            122332111 01111 11237999999988899988888999999 5566654

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=92.41  E-value=0.84  Score=39.95  Aligned_cols=44  Identities=30%  Similarity=0.342  Sum_probs=33.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~  123 (369)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+  .+|.+.+.+...+
T Consensus        14 ~k~vlITGas~gIG~~ia~~l~~~--G~~V~~~--~r~~~~~~~~~~~   57 (247)
T 3i1j_A           14 GRVILVTGAARGIGAAAARAYAAH--GASVVLL--GRTEASLAEVSDQ   57 (247)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEE--ecCHHHHHHHHHH
Confidence            468999999999999999988876  5777665  3566665554444

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=92.41  E-value=0.11  Score=47.58  Aligned_cols=35  Identities=29%  Similarity=0.357  Sum_probs=29.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      ||+|.|.|+||.||....+-+.+....++|+++.-
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r   38 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDK   38 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeC
Confidence            57899999999999999998877544689998864

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=92.41  E-value=0.36  Score=42.70  Aligned_cols=57  Identities=19%  Similarity=0.211  Sum_probs=42.0

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCC--CceEEEEEe---e-cCCHHHHHHHHHhhCCCEEEE
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHE--DKFRVVALA---A-GSNITLLADQVKRFKPQVVAV  131 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~p--d~F~VvaLa---a-g~Nv~lL~eQ~~~FkP~~V~v  131 (369)
                      .+++|.|.|+||.||...++-+.+..  ...+...+.   + -.+.+.+.+..+.++++.|.-
T Consensus         5 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih   67 (319)
T 4b8w_A            5 QSMRILVTGGSGLVGKAIQKVVADGAGLPGEDWVFVSSKDADLTDTAQTRALFEKVQPTHVIH   67 (319)
T ss_dssp             CCCEEEEETCSSHHHHHHHHHHHTTTCCTTCEEEECCTTTCCTTSHHHHHHHHHHSCCSEEEE
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhcCCcccccccccCceecccCCHHHHHHHHhhcCCCEEEE
Confidence            45789999999999999999988753  223333332   1 246788888888888988875

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=92.40  E-value=0.64  Score=42.69  Aligned_cols=65  Identities=12%  Similarity=0.031  Sum_probs=44.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC---HHHHHHHHHhhCCCEEEE-cCchhHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN---ITLLADQVKRFKPQVVAV-RNESLLDEIKE  142 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~N---v~lL~eQ~~~FkP~~V~v-~de~~~~~l~~  142 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.-..+   .+.+.++++++..+...+ .|-.+.+.+++
T Consensus        49 ~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  117 (294)
T 3r3s_A           49 DRKALVTGGDSGIGRAAAIAYARE--GADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARS  117 (294)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHH
Confidence            478999999999999999988876  677776554323   455666667776665554 34344444443

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=92.40  E-value=0.27  Score=46.13  Aligned_cols=96  Identities=10%  Similarity=0.129  Sum_probs=59.3

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchh-HHHHHHHHhcCCCCceE
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL-LDEIKEALANVEEKPEI  153 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~-~~~l~~~l~~~~~~~~v  153 (369)
                      +.++|.|.|++|.||..++.+.+..  ..+|++....  -+++ +.++++..+.+.-.++.. .+.+++           
T Consensus       164 g~~~vli~gg~g~vG~~a~qla~~~--Ga~Vi~~~~~--~~~~-~~~~~~Ga~~~~~~~~~~~~~~v~~-----------  227 (349)
T 3pi7_A          164 GEKAFVMTAGASQLCKLIIGLAKEE--GFRPIVTVRR--DEQI-ALLKDIGAAHVLNEKAPDFEATLRE-----------  227 (349)
T ss_dssp             CCSEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESC--GGGH-HHHHHHTCSEEEETTSTTHHHHHHH-----------
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCC--HHHH-HHHHHcCCCEEEECCcHHHHHHHHH-----------
Confidence            3368999999999999999999986  4688887632  2333 455678887776543322 222332           


Q ss_pred             EecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCcee
Q 017567          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (369)
Q Consensus       154 ~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~ia  196 (369)
                               +.....+|+|+++..+ ..+...+.+++.|-++.
T Consensus       228 ---------~~~~~g~D~vid~~g~-~~~~~~~~~l~~~G~iv  260 (349)
T 3pi7_A          228 ---------VMKAEQPRIFLDAVTG-PLASAIFNAMPKRARWI  260 (349)
T ss_dssp             ---------HHHHHCCCEEEESSCH-HHHHHHHHHSCTTCEEE
T ss_pred             ---------HhcCCCCcEEEECCCC-hhHHHHHhhhcCCCEEE
Confidence                     2221258999997544 33344555555554443

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=92.37  E-value=0.14  Score=50.09  Aligned_cols=37  Identities=22%  Similarity=0.384  Sum_probs=31.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCC-CceEEEEEeecCC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHE-DKFRVVALAAGSN  113 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~p-d~F~VvaLaag~N  113 (369)
                      .||+|+|+||.+|...++++.+|+ ..++++.++..++
T Consensus         2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~   39 (344)
T 3tz6_A            2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARS   39 (344)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECccc
Confidence            379999999999999999999984 4578888876544

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=92.34  E-value=0.61  Score=42.18  Aligned_cols=45  Identities=22%  Similarity=0.257  Sum_probs=34.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+  .+|-+.+.+.++++
T Consensus        11 ~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~--~r~~~~~~~~~~~l   55 (281)
T 3svt_A           11 DRTYLVTGGGSGIGKGVAAGLVAA--GASVMIV--GRNPDKLAGAVQEL   55 (281)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHH
Confidence            468999999999999999988876  5777765  35666665555544

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=92.34  E-value=0.64  Score=41.45  Aligned_cols=64  Identities=16%  Similarity=0.152  Sum_probs=44.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+  .+|-+.+.+..+++..+...+ .|-.+.+.+++.
T Consensus         9 gk~~lVTGas~gIG~a~a~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   73 (248)
T 3op4_A            9 GKVALVTGASRGIGKAIAELLAER--GAKVIGT--ATSESGAQAISDYLGDNGKGMALNVTNPESIEAV   73 (248)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHT--TCEEEEE--ESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHH
Confidence            368999999999999999988876  6777664  467777777777665543332 344444444443

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=92.32  E-value=0.15  Score=48.18  Aligned_cols=89  Identities=16%  Similarity=0.166  Sum_probs=56.2

Q ss_pred             eeEEEEecCChHhHHH-HHHH-HhCCCceE-EEEEeecCCHH-HHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCce
Q 017567           77 KPISVLGSTGSIGTQT-LDIV-AEHEDKFR-VVALAAGSNIT-LLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPE  152 (369)
Q Consensus        77 kkI~ILGSTGSIGtqT-LdVI-~~~pd~F~-VvaLaag~Nv~-lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~  152 (369)
                      .+|.|+|+ |.||..+ +.+. +..  ..+ |+++....+.+ + .+.++++..+++ -.++...               
T Consensus       174 ~~VlV~Ga-G~vG~~a~iqla~k~~--Ga~~Vi~~~~~~~~~~~-~~~~~~lGa~~v-~~~~~~~---------------  233 (357)
T 2b5w_A          174 SSAFVLGN-GSLGLLTLAMLKVDDK--GYENLYCLGRRDRPDPT-IDIIEELDATYV-DSRQTPV---------------  233 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHCTT--CCCEEEEEECCCSSCHH-HHHHHHTTCEEE-ETTTSCG---------------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHc--CCcEEEEEeCCcccHHH-HHHHHHcCCccc-CCCccCH---------------
Confidence            68999999 9999999 9998 765  455 88876544300 2 234567887776 3221110               


Q ss_pred             EEecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcC
Q 017567          153 ILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (369)
Q Consensus       153 v~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~g  192 (369)
                          .+ +.++ .. .+|+|+++..+...+.-.+.+++.|
T Consensus       234 ----~~-i~~~-~g-g~Dvvid~~g~~~~~~~~~~~l~~~  266 (357)
T 2b5w_A          234 ----ED-VPDV-YE-QMDFIYEATGFPKHAIQSVQALAPN  266 (357)
T ss_dssp             ----GG-HHHH-SC-CEEEEEECSCCHHHHHHHHHHEEEE
T ss_pred             ----HH-HHHh-CC-CCCEEEECCCChHHHHHHHHHHhcC
Confidence                12 4445 33 6999999976544555555555544

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=92.30  E-value=0.26  Score=43.37  Aligned_cols=52  Identities=17%  Similarity=0.395  Sum_probs=38.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec-----------CCHHHHHHHHHhhCCCEEEE
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-----------SNITLLADQVKRFKPQVVAV  131 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag-----------~Nv~lL~eQ~~~FkP~~V~v  131 (369)
                      ++|.|.|+||.||....+-+.+   .++|++++-.           .+.+.+.+..+..+++.|.-
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~---g~~V~~~~r~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~   63 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE---RHEVIKVYNSSEIQGGYKLDLTDFPRLEDFIIKKRPDVIIN   63 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT---TSCEEEEESSSCCTTCEECCTTSHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCChhHHHHHHHHhc---CCeEEEecCCCcCCCCceeccCCHHHHHHHHHhcCCCEEEE
Confidence            3699999999999999998874   3889887633           23455555566556776654

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=92.30  E-value=0.11  Score=51.30  Aligned_cols=37  Identities=16%  Similarity=0.328  Sum_probs=31.8

Q ss_pred             CCeeEEEEecCChHhHHHHH-HHHhCCC-ceEEEEEeec
Q 017567           75 GPKPISVLGSTGSIGTQTLD-IVAEHED-KFRVVALAAG  111 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLd-VI~~~pd-~F~VvaLaag  111 (369)
                      ++.||+|+|+||.+|...++ ++.+||- ..+++.++..
T Consensus         3 ~~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~   41 (377)
T 3uw3_A            3 GSMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS   41 (377)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEech
Confidence            45689999999999999999 9999984 5788888754

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=92.24  E-value=1.1  Score=40.00  Aligned_cols=81  Identities=16%  Similarity=0.134  Sum_probs=50.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCCEEEE-cCchhHHHHHHHHhcCCCCc
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQVVAV-RNESLLDEIKEALANVEEKP  151 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F---kP~~V~v-~de~~~~~l~~~l~~~~~~~  151 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.  +|.+.+.+...++   .++...+ .|-.+.+.+++.+.      
T Consensus         5 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~------   74 (260)
T 2qq5_A            5 GQVCVVTGASRGIGRGIALQLCKA--GATVYITG--RHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFE------   74 (260)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHH------
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHH------
Confidence            368999999999999999998876  57777653  5666555444433   4443333 45444444544331      


Q ss_pred             eEEecHHHHHHHhc--CCCCCEEEEec
Q 017567          152 EILAGEQGVIEAAR--HPDAVTVVTGI  176 (369)
Q Consensus       152 ~v~~G~~gl~~~~~--~~~~D~Vv~AI  176 (369)
                                ++.+  ...+|++|+..
T Consensus        75 ----------~~~~~~~g~id~lvnnA   91 (260)
T 2qq5_A           75 ----------QVDREQQGRLDVLVNNA   91 (260)
T ss_dssp             ----------HHHHHHTTCCCEEEECC
T ss_pred             ----------HHHHhcCCCceEEEECC
Confidence                      1211  34689999874

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=92.21  E-value=1.3  Score=39.81  Aligned_cols=64  Identities=17%  Similarity=0.074  Sum_probs=41.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH---hhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK---RFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~---~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|.+.+.+..+   +...+...+ .|-.+.+.+++.
T Consensus        21 ~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   88 (273)
T 1ae1_A           21 GTTALVTGGSKGIGYAIVEELAGL--GARVYTCS--RNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKL   88 (273)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCcchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence            368999999999999999998876  57777653  45555554443   334443332 454444444443

>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*

Probab=92.21  E-value=0.28  Score=41.40  Aligned_cols=105  Identities=13%  Similarity=0.117  Sum_probs=64.8

Q ss_pred             CCeeEEEEecC---ChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCc
Q 017567           75 GPKPISVLGST---GSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKP  151 (369)
Q Consensus        75 ~~kkI~ILGST---GSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~  151 (369)
                      .|++|+|+|++   |++|...+.-+.++  .|+|..+.-..         .       .+..                 .
T Consensus        21 ~p~~iaVVGas~~~g~~G~~~~~~l~~~--G~~v~~Vnp~~---------~-------~i~G-----------------~   65 (144)
T 2d59_A           21 RYKKIALVGASPKPERDANIVMKYLLEH--GYDVYPVNPKY---------E-------EVLG-----------------R   65 (144)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHT--TCEEEEECTTC---------S-------EETT-----------------E
T ss_pred             CCCEEEEEccCCCCCchHHHHHHHHHHC--CCEEEEECCCC---------C-------eECC-----------------e
Confidence            37899999998   89999999988875  67766653221         0       0111                 1


Q ss_pred             eEEecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeecccchhHHhhhcCCeEe
Q 017567          152 EILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKIL  222 (369)
Q Consensus       152 ~v~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~~~~Il  222 (369)
                      .++.   .+.++..  ++|+++.++..-+-..-..++++.|.+..+-+ ....  -.-+.+.|+++|.+++
T Consensus        66 ~~y~---sl~~l~~--~vDlvvi~vp~~~~~~vv~~~~~~gi~~i~~~-~g~~--~~~l~~~a~~~Gi~vv  128 (144)
T 2d59_A           66 KCYP---SVLDIPD--KIEVVDLFVKPKLTMEYVEQAIKKGAKVVWFQ-YNTY--NREASKKADEAGLIIV  128 (144)
T ss_dssp             ECBS---SGGGCSS--CCSEEEECSCHHHHHHHHHHHHHHTCSEEEEC-TTCC--CHHHHHHHHHTTCEEE
T ss_pred             eccC---CHHHcCC--CCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEC-CCch--HHHHHHHHHHcCCEEE
Confidence            1111   1122221  58999998877555555557888887654433 2211  2345678888998887

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=92.20  E-value=0.47  Score=43.33  Aligned_cols=32  Identities=25%  Similarity=0.376  Sum_probs=27.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      |+|.|.|+||.||....+-+.+.  .++|+++.-
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r   34 (348)
T 1ek6_A            3 EKVLVTGGAGYIGSHTVLELLEA--GYLPVVIDN   34 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHT--TCCEEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEec
Confidence            68999999999999999988875  578988853

>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}

Probab=92.18  E-value=0.74  Score=41.76  Aligned_cols=134  Identities=16%  Similarity=0.213  Sum_probs=80.4

Q ss_pred             CeeEEEEec-CChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchh------HHHHHHHHhcCC
Q 017567           76 PKPISVLGS-TGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL------LDEIKEALANVE  148 (369)
Q Consensus        76 ~kkI~ILGS-TGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~------~~~l~~~l~~~~  148 (369)
                      |+||+++.| ||+.....|+-+.+..-..+|+++..++.-....+.|+++.-.+..+...+.      -+++.+.|...+
T Consensus         1 m~rI~vl~SG~g~~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~~   80 (216)
T 2ywr_A            1 MLKIGVLVSGRGSNLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKHNVECKVIQRKEFPSKKEFEERMALELKKKG   80 (216)
T ss_dssp             CEEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHHTCCEEECCGGGSSSHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHcCCCEEEeCcccccchhhhhHHHHHHHHhcC
Confidence            478999965 6888888888887653345999998875434456778888877766533211      123444444434


Q ss_pred             CCceEEecHHHH--HHHhcCCCCCEEEE----eccCccCcHHHHHHHHcCC-----ceeeecccceeecccchhH
Q 017567          149 EKPEILAGEQGV--IEAARHPDAVTVVT----GIVGCAGLKPTVAAIEAGK-----DIALANKETLIAGGPFVLP  212 (369)
Q Consensus       149 ~~~~v~~G~~gl--~~~~~~~~~D~Vv~----AIvG~aGL~pt~~Ai~~gK-----~iaLANKEsLV~aG~li~~  212 (369)
                      .+.-|++|---+  .++.+..+. -++|    -+.-+-|..|...||.+|.     +|-..+++  +=+|+++.+
T Consensus        81 ~Dliv~a~y~~il~~~~l~~~~~-~~iNiHpSLLP~yrG~~pi~~ai~~G~~~tGvTvh~v~~~--~D~G~Ii~q  152 (216)
T 2ywr_A           81 VELVVLAGFMRILSHNFLKYFPN-KVINIHPSLIPAFQGLHAQKQAVEFGVKFSGCTVHIVDES--VDAGPVIVQ  152 (216)
T ss_dssp             CCEEEESSCCSCCCHHHHTTSTT-CEEEEESSCTTTTCSTTHHHHHHHHTCSEEEEEEEECCSS--SSCSCEEEE
T ss_pred             CCEEEEeCchhhCCHHHHhhccC-CeEEEcCCcCcCCCCccHHHHHHHcCCCeEEEEEEEEccc--CCCCCEEEE
Confidence            445555554221  123333221 2343    2466889999999999985     34445533  456777744

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=92.15  E-value=0.37  Score=43.63  Aligned_cols=32  Identities=19%  Similarity=0.262  Sum_probs=27.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      |+|.|.|+||.||....+-+.+.  .++|+++.-
T Consensus         4 ~~vlVtGatG~iG~~l~~~L~~~--G~~V~~~~r   35 (345)
T 2z1m_A            4 KRALITGIRGQDGAYLAKLLLEK--GYEVYGADR   35 (345)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEECS
T ss_pred             CEEEEECCCChHHHHHHHHHHHC--CCEEEEEEC
Confidence            68999999999999999988875  588988763

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=92.15  E-value=2.6  Score=33.85  Aligned_cols=40  Identities=15%  Similarity=0.123  Sum_probs=30.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ  120 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ  120 (369)
                      +++|+|+|+ |.+|.+..+.+.+.  .++|+++-  +|-+.+.+.
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~--g~~V~~id--~~~~~~~~~   45 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAA--GKKVLAVD--KSKEKIELL   45 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHT--TCCEEEEE--SCHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHC--CCeEEEEE--CCHHHHHHH
Confidence            468999998 99999999999986  56677654  465555443

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=92.14  E-value=0.73  Score=40.99  Aligned_cols=49  Identities=16%  Similarity=0.138  Sum_probs=36.6

Q ss_pred             CeeEEEEecCCh--HhHHHHHHHHhCCCceEEEEEeec-CCHHHHHHHHHhhCC
Q 017567           76 PKPISVLGSTGS--IGTQTLDIVAEHEDKFRVVALAAG-SNITLLADQVKRFKP  126 (369)
Q Consensus        76 ~kkI~ILGSTGS--IGtqTLdVI~~~pd~F~VvaLaag-~Nv~lL~eQ~~~FkP  126 (369)
                      .|++.|.|+||+  ||..+.+-+.+.  .++|+.+.-. ++.+.+.++..++..
T Consensus         7 ~k~vlVTGasg~~GIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~   58 (266)
T 3oig_A            7 GRNIVVMGVANKRSIAWGIARSLHEA--GARLIFTYAGERLEKSVHELAGTLDR   58 (266)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHTSSS
T ss_pred             CCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEecCchHHHHHHHHHHHhcCC
Confidence            468999999999  999999998876  6777766432 234666677776654

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=92.14  E-value=0.16  Score=42.55  Aligned_cols=32  Identities=31%  Similarity=0.535  Sum_probs=27.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      |+|.|+|+||.||....+-+.+.  .++|+++.-
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~--g~~V~~~~r   35 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQA--GYEVTVLVR   35 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEES
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHC--CCeEEEEEe
Confidence            68999999999999999988875  488988763

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=92.13  E-value=0.12  Score=48.05  Aligned_cols=36  Identities=25%  Similarity=0.293  Sum_probs=30.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (369)
                      +|+|.|.|+||+||....+-+.+.+..++|+++.-.
T Consensus        10 ~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~   45 (362)
T 3sxp_A           10 NQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKF   45 (362)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECC
Confidence            468999999999999999999885457999998743

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=92.12  E-value=0.26  Score=46.81  Aligned_cols=50  Identities=20%  Similarity=0.369  Sum_probs=37.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEc
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVR  132 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~  132 (369)
                      ++|.|.|++|.||..++.+.+..  ..+|++.. ..  +++ +.++++..+.+.-.
T Consensus       185 ~~VlV~Ga~G~vG~~~~qla~~~--Ga~Vi~~~-~~--~~~-~~~~~lGa~~v~~~  234 (375)
T 2vn8_A          185 KRVLILGASGGVGTFAIQVMKAW--DAHVTAVC-SQ--DAS-ELVRKLGADDVIDY  234 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE-CG--GGH-HHHHHTTCSEEEET
T ss_pred             CEEEEECCCCHHHHHHHHHHHhC--CCEEEEEe-Ch--HHH-HHHHHcCCCEEEEC
Confidence            58999999999999999999986  46888865 32  332 45678887776543

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=92.08  E-value=0.17  Score=45.59  Aligned_cols=54  Identities=30%  Similarity=0.332  Sum_probs=36.9

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeec--------------CCHHHHHHHHHhhCCCEEEE
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG--------------SNITLLADQVKRFKPQVVAV  131 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag--------------~Nv~lL~eQ~~~FkP~~V~v  131 (369)
                      +|.|.|+||+||....+-+.+.+..++|+++.-.              .+.+.+.+..++++++.|+-
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih   68 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTGGIKFITLDVSNRDEIDRAVEKYSIDAIFH   68 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCTTCCEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccccCceEEEecCCCHHHHHHHHhhcCCcEEEE
Confidence            5899999999999999888764234678877532              23345555555556666654

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=92.04  E-value=0.66  Score=40.02  Aligned_cols=34  Identities=21%  Similarity=0.378  Sum_probs=27.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      .|+|.|.|+||.||..+.+-+.+....++|+++.
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~   36 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATA   36 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEE
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEe
Confidence            4689999999999999999988763227888765

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=92.04  E-value=0.42  Score=44.03  Aligned_cols=33  Identities=21%  Similarity=0.063  Sum_probs=28.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      .|+|.|.|+||+||....+-+.+.  .++|+++.-
T Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r   41 (357)
T 1rkx_A            9 GKRVFVTGHTGFKGGWLSLWLQTM--GATVKGYSL   41 (357)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEES
T ss_pred             CCEEEEECCCchHHHHHHHHHHhC--CCeEEEEeC
Confidence            367999999999999999988875  578888764

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=92.03  E-value=0.72  Score=41.10  Aligned_cols=65  Identities=20%  Similarity=0.146  Sum_probs=39.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC--HHHHHHHHHhh-CCCEEEE-cCchhHHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN--ITLLADQVKRF-KPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~N--v~lL~eQ~~~F-kP~~V~v-~de~~~~~l~~~  143 (369)
                      |++.|.|+||.||..+..-+.+.  .++|+.+.-+..  .+.+.+++++. ..+...+ .|-.+.+.+++.
T Consensus         5 k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   73 (260)
T 1x1t_A            5 KVAVVTGSTSGIGLGIATALAAQ--GADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGL   73 (260)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHT--TCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHc--CCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHH
Confidence            68999999999999999998876  577776542211  23333444332 4444333 444444444443

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=92.02  E-value=0.46  Score=43.37  Aligned_cols=53  Identities=15%  Similarity=0.154  Sum_probs=37.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH---hhCCCEEEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK---RFKPQVVAV  131 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~---~FkP~~V~v  131 (369)
                      .|.+.|.|+||.||..+.+-+.+.  .++|+.+. .+|.+.+.+.+.   +..++...+
T Consensus        29 ~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   84 (280)
T 4da9_A           29 RPVAIVTGGRRGIGLGIARALAAS--GFDIAITG-IGDAEGVAPVIAELSGLGARVIFL   84 (280)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE-SCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHC--CCeEEEEe-CCCHHHHHHHHHHHHhcCCcEEEE
Confidence            367999999999999999988875  67776654 456665554444   444555443

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=92.00  E-value=1.7  Score=38.70  Aligned_cols=45  Identities=11%  Similarity=0.335  Sum_probs=33.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK  125 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~Fk  125 (369)
                      +++|+|+| +|.+|.....-+.+..  ++|.  .+.+|-+.+.+..+++.
T Consensus         3 ~m~i~iiG-~G~mG~~~a~~l~~~g--~~v~--~~~~~~~~~~~~~~~~g   47 (259)
T 2ahr_A            3 AMKIGIIG-VGKMASAIIKGLKQTP--HELI--ISGSSLERSKEIAEQLA   47 (259)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHTTSS--CEEE--EECSSHHHHHHHHHHHT
T ss_pred             ccEEEEEC-CCHHHHHHHHHHHhCC--CeEE--EECCCHHHHHHHHHHcC
Confidence            46899999 7999999988887764  5553  34567777766666654

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=91.99  E-value=0.97  Score=42.11  Aligned_cols=32  Identities=22%  Similarity=0.384  Sum_probs=27.2

Q ss_pred             eeEEEEecCChHhHHHHHHHH-hCCCceEEEEEee
Q 017567           77 KPISVLGSTGSIGTQTLDIVA-EHEDKFRVVALAA  110 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~-~~pd~F~VvaLaa  110 (369)
                      ++|.|.|+||.||....+-+. +.  .++|+++.-
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~--g~~V~~~~r   35 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDT--NHSVVIVDS   35 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHC--CCEEEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhC--CCEEEEEec
Confidence            379999999999999999887 64  588998763

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=91.98  E-value=0.86  Score=41.33  Aligned_cols=66  Identities=20%  Similarity=0.206  Sum_probs=43.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC--CHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS--NITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~--Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|.+.|.|+||.||..+..-+.+.  .++|+.+..++  ..+.+.+++++...+...+ .|-.+.+.+++.
T Consensus        27 ~k~~lVTGas~GIG~aia~~la~~--G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~   95 (267)
T 3u5t_A           27 NKVAIVTGASRGIGAAIAARLASD--GFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRL   95 (267)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHH--TCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence            368999999999999999888875  67787654332  2344555556666655544 454444444443

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=91.92  E-value=0.77  Score=41.84  Aligned_cols=64  Identities=14%  Similarity=0.162  Sum_probs=44.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCC--CEEE-EcCchhHHHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKP--QVVA-VRNESLLDEIKEAL  144 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP--~~V~-v~de~~~~~l~~~l  144 (369)
                      |++.|.|+||-||..+.+-+.+.  .++|+.+.  +|.+.+.+...+...  +... ..|-.+.+.+++.+
T Consensus        22 k~vlVTGas~gIG~aia~~La~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~   88 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEA--GWSLVLTG--RREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAV   88 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHH
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHH
Confidence            78999999999999999988876  67877653  567777766666542  3332 34545555555543

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=91.90  E-value=0.37  Score=40.78  Aligned_cols=46  Identities=17%  Similarity=0.363  Sum_probs=33.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec--------CCHHHHHHHHHhh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG--------SNITLLADQVKRF  124 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag--------~Nv~lL~eQ~~~F  124 (369)
                      +++|.|.|+||.||....+-+. .  .++|+++.-.        .+.+.+.+..+++
T Consensus         3 kM~vlVtGasg~iG~~~~~~l~-~--g~~V~~~~r~~~~~~~D~~~~~~~~~~~~~~   56 (202)
T 3d7l_A            3 AMKILLIGASGTLGSAVKERLE-K--KAEVITAGRHSGDVTVDITNIDSIKKMYEQV   56 (202)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHT-T--TSEEEEEESSSSSEECCTTCHHHHHHHHHHH
T ss_pred             CcEEEEEcCCcHHHHHHHHHHH-C--CCeEEEEecCccceeeecCCHHHHHHHHHHh
Confidence            4479999999999999999887 4  6888887533        2445555555555

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=91.89  E-value=0.15  Score=43.93  Aligned_cols=31  Identities=29%  Similarity=0.495  Sum_probs=27.3

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      +|.|+|+||.||....+-+.+.  .++|++++-
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~--g~~V~~~~R   32 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTT--DYQIYAGAR   32 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTS--SCEEEEEES
T ss_pred             eEEEECCCCHHHHHHHHHHHHC--CCEEEEEEC
Confidence            6999999999999999998875  589998863

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=91.87  E-value=0.35  Score=43.10  Aligned_cols=64  Identities=13%  Similarity=0.139  Sum_probs=35.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.  +|.+.+.+..+++..+...+ .|-.+.+.+++.
T Consensus         7 ~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   71 (257)
T 3tpc_A            7 SRVFIVTGASSGLGAAVTRMLAQE--GATVLGLD--LKPPAGEEPAAELGAAVRFRNADVTNEADATAA   71 (257)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEE--SSCC------------CEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEe--CChHHHHHHHHHhCCceEEEEccCCCHHHHHHH
Confidence            468999999999999999988876  67777654  34445555555554443333 444444444443

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=91.86  E-value=0.6  Score=42.36  Aligned_cols=65  Identities=17%  Similarity=0.112  Sum_probs=42.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHH---HHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITL---LADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~l---L~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|.+.|.|+||.||..+.+-+.+.  .++|+.+. .++.+.   +.+++++...+...+ .|-.+.+.+++.
T Consensus        28 ~k~vlVTGas~gIG~aia~~la~~--G~~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~   96 (269)
T 4dmm_A           28 DRIALVTGASRGIGRAIALELAAA--GAKVAVNY-ASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEAL   96 (269)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEE-SSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEe-CCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            468999999999999999988876  67776644 445444   444555555555444 454444444443

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=91.84  E-value=0.6  Score=42.20  Aligned_cols=81  Identities=15%  Similarity=0.124  Sum_probs=51.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.  +|.+.+.+.+++.+..+ ...|-.+.+.+++.+.          
T Consensus        27 ~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~-~~~Dv~~~~~v~~~~~----------   91 (260)
T 3gem_A           27 SAPILITGASQRVGLHCALRLLEH--GHRVIISY--RTEHASVTELRQAGAVA-LYGDFSCETGIMAFID----------   91 (260)
T ss_dssp             CCCEEESSTTSHHHHHHHHHHHHT--TCCEEEEE--SSCCHHHHHHHHHTCEE-EECCTTSHHHHHHHHH----------
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEe--CChHHHHHHHHhcCCeE-EECCCCCHHHHHHHHH----------
Confidence            368999999999999999988876  56776654  33345566666666433 3345555555554332          


Q ss_pred             cHHHHHHHhcCCCCCEEEEec
Q 017567          156 GEQGVIEAARHPDAVTVVTGI  176 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AI  176 (369)
                         .+.  .....+|+||+..
T Consensus        92 ---~~~--~~~g~iD~lv~nA  107 (260)
T 3gem_A           92 ---LLK--TQTSSLRAVVHNA  107 (260)
T ss_dssp             ---HHH--HHCSCCSEEEECC
T ss_pred             ---HHH--HhcCCCCEEEECC
Confidence               111  1234689999863

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=91.83  E-value=0.52  Score=42.61  Aligned_cols=64  Identities=22%  Similarity=0.152  Sum_probs=43.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.  +|.+.+.+.++++..+...+ .|-.+.+.+++.
T Consensus        11 ~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   75 (271)
T 3tzq_B           11 NKVAIITGACGGIGLETSRVLARA--GARVVLAD--LPETDLAGAAASVGRGAVHHVVDLTNEVSVRAL   75 (271)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--CTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEc--CCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHH
Confidence            468999999999999999988876  57777654  44455666666665554443 454444444443

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=91.82  E-value=0.99  Score=43.08  Aligned_cols=66  Identities=15%  Similarity=0.148  Sum_probs=45.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC--------HHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN--------ITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~N--------v~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.-...        ++.+.+.+++...+...+ .|-.+.+.+++.
T Consensus        45 gk~vlVTGas~GIG~aia~~La~~--Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~  119 (346)
T 3kvo_A           45 GCTVFITGASRGIGKAIALKAAKD--GANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAA  119 (346)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCChHHHHHHHHHHHHC--CCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Confidence            368999999999999999888876  577777653322        556777777776655544 454444455543

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=91.82  E-value=0.31  Score=45.32  Aligned_cols=50  Identities=18%  Similarity=0.190  Sum_probs=37.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH-hhCCCEEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK-RFKPQVVA  130 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~-~FkP~~V~  130 (369)
                      .++|.|.|++|.||..+..+.+..  ..+|++..  +|-+++ +.++ ++..+++.
T Consensus       156 g~~vlI~Ga~g~iG~~~~~~a~~~--G~~V~~~~--~~~~~~-~~~~~~~g~~~~~  206 (345)
T 2j3h_A          156 GETVYVSAASGAVGQLVGQLAKMM--GCYVVGSA--GSKEKV-DLLKTKFGFDDAF  206 (345)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE--SSHHHH-HHHHHTSCCSEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe--CCHHHH-HHHHHHcCCceEE
Confidence            368999999999999999999976  46777755  344555 3444 67776654

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=91.81  E-value=0.077  Score=47.24  Aligned_cols=34  Identities=21%  Similarity=0.379  Sum_probs=28.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      |+|.|.|+||.||...++-+.+.+..++|++++-
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r   34 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVR   34 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEES
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEc
Confidence            5799999999999999998877533588998874

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=91.81  E-value=0.35  Score=44.86  Aligned_cols=50  Identities=18%  Similarity=0.196  Sum_probs=37.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVA  130 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~  130 (369)
                      .++|.|.|+||.||..+....+..  .++|++..  ++-+++. .++++..+.++
T Consensus       146 g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~--~~~~~~~-~~~~~g~~~~~  195 (333)
T 1v3u_A          146 GETVLVSAAAGAVGSVVGQIAKLK--GCKVVGAA--GSDEKIA-YLKQIGFDAAF  195 (333)
T ss_dssp             SCEEEEESTTBHHHHHHHHHHHHT--TCEEEEEE--SSHHHHH-HHHHTTCSEEE
T ss_pred             CCEEEEecCCCcHHHHHHHHHHHC--CCEEEEEe--CCHHHHH-HHHhcCCcEEE
Confidence            368999999999999999999976  56787754  3555554 34777766554

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=91.80  E-value=0.6  Score=42.47  Aligned_cols=33  Identities=30%  Similarity=0.387  Sum_probs=28.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      .|+|.|.|+||.||....+-+.+.  .++|+++.-
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~r   37 (341)
T 3enk_A            5 KGTILVTGGAGYIGSHTAVELLAH--GYDVVIADN   37 (341)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECC
T ss_pred             CcEEEEecCCcHHHHHHHHHHHHC--CCcEEEEec
Confidence            468999999999999999988876  688888764

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=91.80  E-value=0.58  Score=41.35  Aligned_cols=42  Identities=21%  Similarity=0.166  Sum_probs=33.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQV  121 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~  121 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.  +|.+.+.+..
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~   47 (246)
T 2ag5_A            6 GKVIILTAAAQGIGQAAALAFARE--GAKVIATD--INESKLQELE   47 (246)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHGGGG
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHH
Confidence            368999999999999999998876  57787764  5677765544

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=91.79  E-value=0.86  Score=41.54  Aligned_cols=64  Identities=13%  Similarity=0.081  Sum_probs=41.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH---hhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK---RFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~---~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||-||..+..-+.+.  .++|+.+.  +|.+.+.+.++   +...+...+ .|-.+.+.+++.
T Consensus         4 ~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~--r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~   71 (264)
T 3tfo_A            4 DKVILITGASGGIGEGIARELGVA--GAKILLGA--RRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAF   71 (264)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE--SSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence            368999999999999999988876  57777653  55555554444   445544443 444444444443

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=91.71  E-value=0.17  Score=49.84  Aligned_cols=37  Identities=24%  Similarity=0.466  Sum_probs=30.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCC-CceEEEEEeecCC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHE-DKFRVVALAAGSN  113 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~p-d~F~VvaLaag~N  113 (369)
                      .||+|+|+||.+|...++++.+++ ..++++.++..++
T Consensus         3 ~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~s   40 (366)
T 3pwk_A            3 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARS   40 (366)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTT
T ss_pred             cEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEcccc
Confidence            489999999999999999999873 2478888876544

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=91.71  E-value=0.42  Score=45.74  Aligned_cols=38  Identities=16%  Similarity=0.246  Sum_probs=31.5

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC
Q 017567           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN  113 (369)
Q Consensus        74 ~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~N  113 (369)
                      ..+|+|.|.|+||+||...+.-+.+  ..++|+++.-..+
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~--~g~~V~~~~R~~~  104 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQG--YSHRIYCFIRADN  104 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTT--TEEEEEEEEECSS
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHc--CCCEEEEEECCCC
Confidence            4467999999999999999998854  4789999976655

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=91.70  E-value=0.14  Score=49.37  Aligned_cols=35  Identities=26%  Similarity=0.470  Sum_probs=29.7

Q ss_pred             eeEEEEecCChHhHHHHHHHH--hCCCceEEEEEeecC
Q 017567           77 KPISVLGSTGSIGTQTLDIVA--EHEDKFRVVALAAGS  112 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~--~~pd~F~VvaLaag~  112 (369)
                      .||+|+|+||-||+..++.+.  .||+ ++|++++..+
T Consensus         7 ~kV~IiGAtG~iG~~llr~L~~~~~~~-~elv~i~s~~   43 (340)
T 2hjs_A            7 LNVAVVGATGSVGEALVGLLDERDFPL-HRLHLLASAE   43 (340)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCC-SCEEEEECTT
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCc-EEEEEEecCC
Confidence            479999999999999999988  6664 8898887544

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=91.69  E-value=0.17  Score=44.08  Aligned_cols=31  Identities=19%  Similarity=0.324  Sum_probs=27.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      |+|.|.|+||.||....+-+.+.  .++|++++
T Consensus        22 ~~ilVtGatG~iG~~l~~~L~~~--G~~V~~~~   52 (236)
T 3e8x_A           22 MRVLVVGANGKVARYLLSELKNK--GHEPVAMV   52 (236)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE
T ss_pred             CeEEEECCCChHHHHHHHHHHhC--CCeEEEEE
Confidence            57999999999999999998875  58898876

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=91.69  E-value=0.47  Score=43.38  Aligned_cols=81  Identities=14%  Similarity=0.135  Sum_probs=50.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCC--EEEEcCchhHHHHHHHHhcCCCC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQ--VVAVRNESLLDEIKEALANVEEK  150 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F---kP~--~V~v~de~~~~~l~~~l~~~~~~  150 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.  +|.+.+.+.+.++   ..+  .+...|-.+.+.+++.+.     
T Consensus        33 gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~-----  103 (281)
T 4dry_A           33 GRIALVTGGGTGVGRGIAQALSAE--GYSVVITG--RRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFA-----  103 (281)
T ss_dssp             -CEEEETTTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHH-----
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHH-----
Confidence            468999999999999999988876  57777653  5666655555443   222  233355555555554432     


Q ss_pred             ceEEecHHHHHHHhcCCCCCEEEEe
Q 017567          151 PEILAGEQGVIEAARHPDAVTVVTG  175 (369)
Q Consensus       151 ~~v~~G~~gl~~~~~~~~~D~Vv~A  175 (369)
                              .+.+-  ...+|++|+.
T Consensus       104 --------~~~~~--~g~iD~lvnn  118 (281)
T 4dry_A          104 --------AVRAE--FARLDLLVNN  118 (281)
T ss_dssp             --------HHHHH--HSCCSEEEEC
T ss_pred             --------HHHHH--cCCCCEEEEC
Confidence                    11121  2368999986

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=91.65  E-value=0.92  Score=41.66  Aligned_cols=66  Identities=18%  Similarity=0.206  Sum_probs=43.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec----------CCHHHHHHH---HHhhCCCEEEE-cCchhHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG----------SNITLLADQ---VKRFKPQVVAV-RNESLLDEIK  141 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag----------~Nv~lL~eQ---~~~FkP~~V~v-~de~~~~~l~  141 (369)
                      .|.+.|.|+||-||..+..-+.+.  .++|+.+.-.          ++.+.+.+.   +++...+...+ .|-.+.+.++
T Consensus        28 gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  105 (299)
T 3t7c_A           28 GKVAFITGAARGQGRSHAITLARE--GADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ  105 (299)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            468999999999999999988876  6788876532          345555544   44445555443 4544444554


Q ss_pred             HH
Q 017567          142 EA  143 (369)
Q Consensus       142 ~~  143 (369)
                      +.
T Consensus       106 ~~  107 (299)
T 3t7c_A          106 AA  107 (299)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=91.64  E-value=0.49  Score=44.12  Aligned_cols=32  Identities=19%  Similarity=0.306  Sum_probs=27.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      +++|.|.|+||+||....+-+.+.  .++|+++.
T Consensus        11 ~~~vlVTG~tGfIG~~l~~~L~~~--G~~V~~~~   42 (404)
T 1i24_A           11 GSRVMVIGGDGYCGWATALHLSKK--NYEVCIVD   42 (404)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE
T ss_pred             CCeEEEeCCCcHHHHHHHHHHHhC--CCeEEEEE
Confidence            468999999999999999988775  58899885

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=91.63  E-value=0.88  Score=40.18  Aligned_cols=47  Identities=23%  Similarity=0.241  Sum_probs=32.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceE-EEEEeecCCHHHHHHHHHhh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFR-VVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~-VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++ |+.+.-..+-+.+.+....+
T Consensus         5 ~k~vlVtGas~gIG~~~a~~l~~~--G~~~v~~~~r~~~~~~~~~l~~~~   52 (254)
T 1sby_A            5 NKNVIFVAALGGIGLDTSRELVKR--NLKNFVILDRVENPTALAELKAIN   52 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--CCSEEEEEESSCCHHHHHHHHHHC
T ss_pred             CcEEEEECCCChHHHHHHHHHHHC--CCcEEEEEecCchHHHHHHHHHhC
Confidence            367999999999999999988875  565 55544333334454444433

>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*

Probab=91.56  E-value=0.37  Score=46.74  Aligned_cols=110  Identities=16%  Similarity=0.148  Sum_probs=67.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh--hCCCE---EEEcCchhHHHHHHHHhcCCCCc
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR--FKPQV---VAVRNESLLDEIKEALANVEEKP  151 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~--FkP~~---V~v~de~~~~~l~~~l~~~~~~~  151 (369)
                      .||+|.| +|.||...++.+.+||+ ++|+++......+.++-+.+-  -.|++   +-..+..        +.-.+..+
T Consensus         2 ikVgI~G-~G~iG~~l~R~l~~~~~-veiv~i~~~~~~~~~a~l~~~ds~~g~~~~~v~~~~~~--------l~v~g~~i   71 (330)
T 1gad_O            2 IKVGING-FGRIGRIVFRAAQKRSD-IEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGH--------LIVNGKKI   71 (330)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCSS-EEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTE--------EEETTEEE
T ss_pred             eEEEEEC-cCHHHHHHHHHHHcCCC-eEEEEEcCCCChhHHhHhhcccccCCCCCCeEEEcCCE--------EEECCEEE
Confidence            5899999 59999999999999975 999999987788877654442  23333   1111100        00001112


Q ss_pred             eEEecHHHHHHH-hcCCCCCEEEEeccCccCcHHHHHHHHcCCc-eee
Q 017567          152 EILAGEQGVIEA-ARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD-IAL  197 (369)
Q Consensus       152 ~v~~G~~gl~~~-~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~-iaL  197 (369)
                      +++.-. ...++ -...++|+|+.+.-.+...+-.-..+++|.+ |-|
T Consensus        72 ~v~~~~-dp~~i~w~~~~vDvVf~atg~~~s~e~a~~~l~~GakvVdl  118 (330)
T 1gad_O           72 RVTAER-DPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVM  118 (330)
T ss_dssp             EEECCS-SGGGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEE
T ss_pred             EEEEcC-ChhhCccccccCCEEEECCCccccHHHHHHHHHCCCEEEEE
Confidence            222211 11111 0012589999998888887777778888844 444

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=91.48  E-value=0.66  Score=41.91  Aligned_cols=45  Identities=20%  Similarity=0.239  Sum_probs=33.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.  +|.+.+.+...+.
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~   50 (280)
T 1xkq_A            6 NKTVIITGSSNGIGRTTAILFAQE--GANVTITG--RSSERLEETRQII   50 (280)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHH
Confidence            368999999999999999988876  67887753  5666665544443

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=91.47  E-value=0.47  Score=45.40  Aligned_cols=89  Identities=13%  Similarity=0.117  Sum_probs=62.4

Q ss_pred             eeEEEEe-cCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchh-HHHHHHHHhcCCCCceEE
Q 017567           77 KPISVLG-STGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL-LDEIKEALANVEEKPEIL  154 (369)
Q Consensus        77 kkI~ILG-STGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~-~~~l~~~l~~~~~~~~v~  154 (369)
                      .+|.|+| ++|.||..++.+.+..  ..+|++.+.  +-+++ +.++++..+.+.-.++.. .+.+++            
T Consensus       172 ~~vlV~gag~G~vG~~a~q~a~~~--Ga~Vi~~~~--~~~~~-~~~~~lGa~~~~~~~~~~~~~~v~~------------  234 (379)
T 3iup_A          172 HSALVHTAAASNLGQMLNQICLKD--GIKLVNIVR--KQEQA-DLLKAQGAVHVCNAASPTFMQDLTE------------  234 (379)
T ss_dssp             CSCEEESSTTSHHHHHHHHHHHHH--TCCEEEEES--SHHHH-HHHHHTTCSCEEETTSTTHHHHHHH------------
T ss_pred             CEEEEECCCCCHHHHHHHHHHHHC--CCEEEEEEC--CHHHH-HHHHhCCCcEEEeCCChHHHHHHHH------------
Confidence            5799997 9999999999999986  457888763  44554 567788888776544332 223332            


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHH
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIE  190 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~  190 (369)
                              +.....+|+|++++.|-..+...+.+++
T Consensus       235 --------~t~~~g~d~v~d~~g~~~~~~~~~~~l~  262 (379)
T 3iup_A          235 --------ALVSTGATIAFDATGGGKLGGQILTCME  262 (379)
T ss_dssp             --------HHHHHCCCEEEESCEEESHHHHHHHHHH
T ss_pred             --------HhcCCCceEEEECCCchhhHHHHHHhcc
Confidence                    2222359999999877666777778875

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=91.44  E-value=0.18  Score=46.79  Aligned_cols=87  Identities=18%  Similarity=0.334  Sum_probs=53.6

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeec-CCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-SNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag-~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      +|.|.|++|.||..++.+.+..  ..+|++.+.. .+.+    .++++..+++.-.++..    .+.             
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~--Ga~vi~~~~~~~~~~----~~~~lGa~~~i~~~~~~----~~~-------------  208 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKR--GYTVEASTGKAAEHD----YLRVLGAKEVLAREDVM----AER-------------  208 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCTTCHH----HHHHTTCSEEEECC-----------------------
T ss_pred             eEEEecCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHH----HHHHcCCcEEEecCCcH----HHH-------------
Confidence            7999999999999999999986  4678887654 2333    44667777765322110    010             


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcC
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~g  192 (369)
                         +.++ ....+|+|++++.| ..+...+.+++.|
T Consensus       209 ---~~~~-~~~~~d~vid~~g~-~~~~~~~~~l~~~  239 (328)
T 1xa0_A          209 ---IRPL-DKQRWAAAVDPVGG-RTLATVLSRMRYG  239 (328)
T ss_dssp             ------C-CSCCEEEEEECSTT-TTHHHHHHTEEEE
T ss_pred             ---HHHh-cCCcccEEEECCcH-HHHHHHHHhhccC
Confidence               1111 12258999999765 5555555554443

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=91.40  E-value=0.68  Score=41.48  Aligned_cols=64  Identities=14%  Similarity=0.082  Sum_probs=41.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHH---HHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLL---ADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL---~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||-||..+.+-+.+.  .++|+.+.  +|.+.+   .+.+++..++...+ .|-.+.+.+++.
T Consensus        12 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   79 (256)
T 3gaf_A           12 DAVAIVTGAAAGIGRAIAGTFAKA--GASVVVTD--LKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAV   79 (256)
T ss_dssp             TCEEEECSCSSHHHHHHHHHHHHH--TCEEEEEE--SSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            368999999999999999888875  57776653  454444   44455555665544 444444444443

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=91.40  E-value=1.1  Score=41.25  Aligned_cols=81  Identities=10%  Similarity=-0.012  Sum_probs=48.5

Q ss_pred             CeeEEEEecCCh--HhHHHHHHHHhCCCceEEEEEeecCCH---HHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCC
Q 017567           76 PKPISVLGSTGS--IGTQTLDIVAEHEDKFRVVALAAGSNI---TLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEK  150 (369)
Q Consensus        76 ~kkI~ILGSTGS--IGtqTLdVI~~~pd~F~VvaLaag~Nv---~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~  150 (369)
                      .|++.|.|+||+  ||..+..-+.+.  .++|+.+.  +|-   +.+.+...++.--.+...|-.+.+.+++.+.     
T Consensus        31 gk~~lVTGasg~~GIG~aia~~la~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~-----  101 (293)
T 3grk_A           31 GKRGLILGVANNRSIAWGIAKAAREA--GAELAFTY--QGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFE-----  101 (293)
T ss_dssp             TCEEEEECCCSSSSHHHHHHHHHHHT--TCEEEEEE--CSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHH-----
T ss_pred             CCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEEc--CCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHH-----
Confidence            468999999999  999999988876  57776543  332   3344444444322233345555555554332     


Q ss_pred             ceEEecHHHHHHHhcCCCCCEEEEe
Q 017567          151 PEILAGEQGVIEAARHPDAVTVVTG  175 (369)
Q Consensus       151 ~~v~~G~~gl~~~~~~~~~D~Vv~A  175 (369)
                              .+.  .+...+|++|+.
T Consensus       102 --------~~~--~~~g~iD~lVnn  116 (293)
T 3grk_A          102 --------TLE--KKWGKLDFLVHA  116 (293)
T ss_dssp             --------HHH--HHTSCCSEEEEC
T ss_pred             --------HHH--HhcCCCCEEEEC
Confidence                    111  123468999986

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=91.38  E-value=0.96  Score=41.11  Aligned_cols=81  Identities=23%  Similarity=0.242  Sum_probs=50.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCCEEEE-cCchhHHHHHHHHhcCCCCc
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQVVAV-RNESLLDEIKEALANVEEKP  151 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F---kP~~V~v-~de~~~~~l~~~l~~~~~~~  151 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+  .+|.+.+.+..+++   .++...+ .|-.+.+.+++.+.      
T Consensus        26 gk~~lVTGas~gIG~aia~~la~~--G~~V~~~--~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~------   95 (271)
T 4ibo_A           26 GRTALVTGSSRGLGRAMAEGLAVA--GARILIN--GTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFA------   95 (271)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEC--CSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHH------
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH------
Confidence            368999999999999999998876  5677653  45666665555444   4554443 34444444444331      


Q ss_pred             eEEecHHHHHHHhcCCCCCEEEEe
Q 017567          152 EILAGEQGVIEAARHPDAVTVVTG  175 (369)
Q Consensus       152 ~v~~G~~gl~~~~~~~~~D~Vv~A  175 (369)
                             .+.  .....+|++|+.
T Consensus        96 -------~~~--~~~g~iD~lv~n  110 (271)
T 4ibo_A           96 -------RLD--EQGIDVDILVNN  110 (271)
T ss_dssp             -------HHH--HHTCCCCEEEEC
T ss_pred             -------HHH--HHCCCCCEEEEC
Confidence                   111  123468999986

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=91.38  E-value=0.65  Score=42.79  Aligned_cols=44  Identities=23%  Similarity=0.289  Sum_probs=33.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~  123 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.  +|.+.+.+..++
T Consensus        26 ~k~vlVTGas~gIG~aia~~L~~~--G~~V~~~~--r~~~~~~~~~~~   69 (297)
T 1xhl_A           26 GKSVIITGSSNGIGRSAAVIFAKE--GAQVTITG--RNEDRLEETKQQ   69 (297)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHH
Confidence            368999999999999999998876  67777653  566665544443

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=91.34  E-value=0.15  Score=41.87  Aligned_cols=46  Identities=17%  Similarity=0.384  Sum_probs=35.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKP  126 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP  126 (369)
                      .++|+|+|+ |.||...+..+.+.  .++ +.+ +.+|.+++.+.++++..
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~--g~~-v~v-~~r~~~~~~~~a~~~~~   66 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYP--QYK-VTV-AGRNIDHVRAFAEKYEY   66 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTT--TCE-EEE-EESCHHHHHHHHHHHTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhC--CCE-EEE-EcCCHHHHHHHHHHhCC
Confidence            568999995 99999999888774  477 443 45678888777888763

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=91.34  E-value=1.2  Score=39.98  Aligned_cols=65  Identities=17%  Similarity=0.183  Sum_probs=42.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHH---HHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLL---ADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL---~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+. +++.+.+   .+++++..++...+ .|-.+.+.+++.
T Consensus         8 ~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   76 (259)
T 3edm_A            8 NRTIVVAGAGRDIGRACAIRFAQE--GANVVLTY-NGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAA   76 (259)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE-CSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEc-CCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            468999999999999999988876  67777654 3444443   44444455554443 454444455443

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=91.30  E-value=0.17  Score=49.64  Aligned_cols=36  Identities=22%  Similarity=0.475  Sum_probs=28.5

Q ss_pred             CeeEEEEecCChHhHHHHH-HHHhCC-CceEEEEEeec
Q 017567           76 PKPISVLGSTGSIGTQTLD-IVAEHE-DKFRVVALAAG  111 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLd-VI~~~p-d~F~VvaLaag  111 (369)
                      |+||+|+|+||-||+..++ ++.+++ ...+|+.++..
T Consensus         1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~   38 (367)
T 1t4b_A            1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTS   38 (367)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeC
Confidence            4689999999999999999 787764 34677666654

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=91.28  E-value=0.85  Score=42.42  Aligned_cols=66  Identities=15%  Similarity=0.147  Sum_probs=43.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec----------CCHHHHHHH---HHhhCCCEEEE-cCchhHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG----------SNITLLADQ---VKRFKPQVVAV-RNESLLDEIK  141 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag----------~Nv~lL~eQ---~~~FkP~~V~v-~de~~~~~l~  141 (369)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.-.          ++.+.+.+.   +++...+...+ .|-.+.+.++
T Consensus        46 gk~~lVTGas~GIG~aia~~la~~--G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  123 (317)
T 3oec_A           46 GKVAFITGAARGQGRTHAVRLAQD--GADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ  123 (317)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            368999999999999999988876  6788876432          245555444   44445555443 4544444444


Q ss_pred             HH
Q 017567          142 EA  143 (369)
Q Consensus       142 ~~  143 (369)
                      +.
T Consensus       124 ~~  125 (317)
T 3oec_A          124 AV  125 (317)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=91.27  E-value=0.18  Score=45.43  Aligned_cols=32  Identities=31%  Similarity=0.487  Sum_probs=27.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      |+|.|.|+||.||....+-+.+.  .++|+++.-
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r   32 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVEL--GYEVVVVDN   32 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHhC--CCEEEEEeC
Confidence            47999999999999999998875  578988853

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=91.24  E-value=0.57  Score=42.16  Aligned_cols=65  Identities=17%  Similarity=0.217  Sum_probs=41.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHH---HHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITL---LADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~l---L~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+. +++.+.   +.+..++...+...+ .|-.+.+.+++.
T Consensus        29 ~k~vlITGas~gIG~~la~~l~~~--G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   97 (271)
T 4iin_A           29 GKNVLITGASKGIGAEIAKTLASM--GLKVWINY-RSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEA   97 (271)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEE-SSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe-CCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence            368999999999999999988876  67776644 445544   444444555554443 444444444443

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=91.23  E-value=0.14  Score=52.61  Aligned_cols=105  Identities=16%  Similarity=0.133  Sum_probs=64.6

Q ss_pred             cCCCCCCeeEEEEecCChHhHHHHHHHHhCCCce--EEEEEeecCCHHHHHHHHHhhCCCEEEEc-CchhHHHHHHHHhc
Q 017567           70 RKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKF--RVVALAAGSNITLLADQVKRFKPQVVAVR-NESLLDEIKEALAN  146 (369)
Q Consensus        70 ~~~~~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F--~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~-de~~~~~l~~~l~~  146 (369)
                      +|...-++||+|+| .|+||+.++..+.+++|-|  +|+......-...+.+   ....++..+. |...+++       
T Consensus         7 ~~~~~~~~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~---~~g~~~~~~~Vdadnv~~-------   75 (480)
T 2ph5_A            7 TKKILFKNRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQ---QYGVSFKLQQITPQNYLE-------   75 (480)
T ss_dssp             TTCBCCCSCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHH---HHTCEEEECCCCTTTHHH-------
T ss_pred             cceecCCCCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHh---hcCCceeEEeccchhHHH-------
Confidence            35555667999999 9999999999999998755  5665432211112222   2222332221 1111111       


Q ss_pred             CCCCceEEecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCc-eeeec
Q 017567          147 VEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD-IALAN  199 (369)
Q Consensus       147 ~~~~~~v~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~-iaLAN  199 (369)
                                  .+.++.+.  .|+|||+..-...+.-.-+|+++|.. |=+||
T Consensus        76 ------------~l~aLl~~--~DvVIN~s~~~~~l~Im~acleaGv~YlDTa~  115 (480)
T 2ph5_A           76 ------------VIGSTLEE--NDFLIDVSIGISSLALIILCNQKGALYINAAT  115 (480)
T ss_dssp             ------------HTGGGCCT--TCEEEECCSSSCHHHHHHHHHHHTCEEEESSC
T ss_pred             ------------HHHHHhcC--CCEEEECCccccCHHHHHHHHHcCCCEEECCC
Confidence                        12224443  49999988888888888889999976 66776

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=91.21  E-value=0.21  Score=45.40  Aligned_cols=33  Identities=21%  Similarity=0.421  Sum_probs=27.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      |+|.|.|+||+||...++-+.+.+ .++|+++.-
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~-g~~V~~~~r   33 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLRED-HYEVYGLDI   33 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHST-TCEEEEEES
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhC-CCEEEEEeC
Confidence            479999999999999999988753 488998864

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=91.21  E-value=1  Score=40.32  Aligned_cols=45  Identities=18%  Similarity=0.237  Sum_probs=33.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.  +|.+.+.+.++++
T Consensus        12 ~k~vlITGas~GIG~~~a~~L~~~--G~~V~~~~--r~~~~~~~~~~~l   56 (311)
T 3o26_A           12 RRCAVVTGGNKGIGFEICKQLSSN--GIMVVLTC--RDVTKGHEAVEKL   56 (311)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHH
T ss_pred             CcEEEEecCCchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHH
Confidence            468999999999999999998876  57776654  5666655544443

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=91.18  E-value=0.2  Score=47.00  Aligned_cols=84  Identities=12%  Similarity=0.153  Sum_probs=58.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      .+|.|.|+ |.||..++.+.+..  ..+|++......  ++ +.++++..+.+. .+++.       +            
T Consensus       178 ~~VlV~Ga-G~vG~~a~qla~~~--Ga~Vi~~~~~~~--~~-~~~~~lGa~~v~-~~~~~-------~------------  231 (348)
T 3two_A          178 TKVGVAGF-GGLGSMAVKYAVAM--GAEVSVFARNEH--KK-QDALSMGVKHFY-TDPKQ-------C------------  231 (348)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHT--TCEEEEECSSST--TH-HHHHHTTCSEEE-SSGGG-------C------------
T ss_pred             CEEEEECC-cHHHHHHHHHHHHC--CCeEEEEeCCHH--HH-HHHHhcCCCeec-CCHHH-------H------------
Confidence            58999997 99999999999987  468888764432  22 345678887776 33211       0            


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCce
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~i  195 (369)
                              .. .+|+|++++.+-..+.-.+.+++.|=++
T Consensus       232 --------~~-~~D~vid~~g~~~~~~~~~~~l~~~G~i  261 (348)
T 3two_A          232 --------KE-ELDFIISTIPTHYDLKDYLKLLTYNGDL  261 (348)
T ss_dssp             --------CS-CEEEEEECCCSCCCHHHHHTTEEEEEEE
T ss_pred             --------hc-CCCEEEECCCcHHHHHHHHHHHhcCCEE
Confidence                    01 6999999987776777766666555443

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=91.17  E-value=0.17  Score=50.00  Aligned_cols=35  Identities=17%  Similarity=0.361  Sum_probs=30.6

Q ss_pred             eEEEEecCChHhHHHHH-HHHhCCC-ceEEEEEeecC
Q 017567           78 PISVLGSTGSIGTQTLD-IVAEHED-KFRVVALAAGS  112 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLd-VI~~~pd-~F~VvaLaag~  112 (369)
                      ||+|+|+||.+|...++ ++.+||- ..+++.++..+
T Consensus         2 ~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~   38 (370)
T 3pzr_A            2 RVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ   38 (370)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSS
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccc
Confidence            79999999999999999 9999984 57888887654

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=91.11  E-value=0.21  Score=45.96  Aligned_cols=33  Identities=21%  Similarity=0.328  Sum_probs=28.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      +++|.|.|+||+||...++-+.+.  .++|+++.-
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r   59 (343)
T 2b69_A           27 RKRILITGGAGFVGSHLTDKLMMD--GHEVTVVDN   59 (343)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEEC
T ss_pred             CCEEEEEcCccHHHHHHHHHHHHC--CCEEEEEeC
Confidence            468999999999999999988875  588998864

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=91.10  E-value=0.17  Score=42.92  Aligned_cols=35  Identities=31%  Similarity=0.449  Sum_probs=28.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      .|+|.|+|+||.||....+-+.+....++|++++-
T Consensus         5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r   39 (215)
T 2a35_A            5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPAR   39 (215)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBS
T ss_pred             CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeC
Confidence            35899999999999999999988644238888764

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=91.07  E-value=0.87  Score=40.87  Aligned_cols=44  Identities=18%  Similarity=0.162  Sum_probs=33.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~  123 (369)
                      .|.+.|.|+||-||..+.+-+.+.  .++|+.+  .+|.+.+.+..++
T Consensus         8 ~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~--~r~~~~~~~~~~~   51 (265)
T 3lf2_A            8 EAVAVVTGGSSGIGLATVELLLEA--GAAVAFC--ARDGERLRAAESA   51 (265)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHH
Confidence            468999999999999999988876  5777664  3566666555444

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=91.06  E-value=0.23  Score=45.54  Aligned_cols=50  Identities=20%  Similarity=0.260  Sum_probs=36.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVA  130 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~  130 (369)
                      -++|.|.|+||.||..++.+.+..  ..+|++....  -+++ +.++++..+.+.
T Consensus       126 g~~vlV~Ga~G~vG~~~~~~a~~~--Ga~Vi~~~~~--~~~~-~~~~~~ga~~~~  175 (302)
T 1iz0_A          126 GEKVLVQAAAGALGTAAVQVARAM--GLRVLAAASR--PEKL-ALPLALGAEEAA  175 (302)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESS--GGGS-HHHHHTTCSEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCC--HHHH-HHHHhcCCCEEE
Confidence            468999999999999999999986  4688887642  2332 344667776654

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=91.04  E-value=1.8  Score=39.55  Aligned_cols=64  Identities=20%  Similarity=0.172  Sum_probs=43.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F---kP~~V~v-~de~~~~~l~~~  143 (369)
                      .|.+.|.|+||-||..+..-+.+.  .++|+.+.  +|.+.+.+.+.++   ..+...+ .|-.+.+.+++.
T Consensus        28 ~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~--r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~   95 (283)
T 3v8b_A           28 SPVALITGAGSGIGRATALALAAD--GVTVGALG--RTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNA   95 (283)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEE--SSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            367999999999999999988876  67777653  5666666666554   3344433 454444445443

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=91.00  E-value=0.43  Score=45.07  Aligned_cols=34  Identities=29%  Similarity=0.405  Sum_probs=28.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (369)
                      +|+|.|.|+||.||....+-+.+.  .++|++++-.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~   38 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAV--GHHVRAQVHS   38 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHT--TCCEEEEESC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECC
Confidence            468999999999999999988774  5889988743

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=90.99  E-value=1.1  Score=40.06  Aligned_cols=45  Identities=18%  Similarity=0.139  Sum_probs=33.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~  123 (369)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+. .+|.+.+.+..++
T Consensus        11 ~k~~lVTGas~gIG~~ia~~l~~~--G~~V~~~~-r~~~~~~~~~~~~   55 (276)
T 1mxh_A           11 CPAAVITGGARRIGHSIAVRLHQQ--GFRVVVHY-RHSEGAAQRLVAE   55 (276)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEE-SSCHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEe-CCChHHHHHHHHH
Confidence            368999999999999999998876  57777654 3255555544443

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=90.98  E-value=0.59  Score=43.65  Aligned_cols=95  Identities=16%  Similarity=0.210  Sum_probs=61.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      ..+|.|.|+ |.||..++.+.+.. ...+|++...  +-+++ +.++++..+.+.-.+++..+.+++             
T Consensus       172 g~~vlv~Ga-G~vG~~a~qla~~~-g~~~Vi~~~~--~~~~~-~~~~~lGa~~~i~~~~~~~~~v~~-------------  233 (345)
T 3jv7_A          172 GSTAVVIGV-GGLGHVGIQILRAV-SAARVIAVDL--DDDRL-ALAREVGADAAVKSGAGAADAIRE-------------  233 (345)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHH-CCCEEEEEES--CHHHH-HHHHHTTCSEEEECSTTHHHHHHH-------------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc-CCCEEEEEcC--CHHHH-HHHHHcCCCEEEcCCCcHHHHHHH-------------
Confidence            358999998 99999999999875 2357777653  34444 467889888876554433333333             


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCce
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~i  195 (369)
                             +.....+|+|++++.+-..+.-.+.+++.|=++
T Consensus       234 -------~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~i  266 (345)
T 3jv7_A          234 -------LTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHI  266 (345)
T ss_dssp             -------HHGGGCEEEEEESSCCHHHHHHHHHHEEEEEEE
T ss_pred             -------HhCCCCCeEEEECCCCHHHHHHHHHHHhcCCEE
Confidence                   222235899999866654555555655554433

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=90.98  E-value=0.48  Score=44.80  Aligned_cols=90  Identities=14%  Similarity=0.070  Sum_probs=55.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      ++|.|+|+ |.||..++.+.+..  .. +|+++..  +-+++ +.++++..+++.-.++...   .              
T Consensus       192 ~~VlV~Ga-G~vG~~a~qlak~~--Ga~~Vi~~~~--~~~~~-~~a~~lGa~~vi~~~~~~~---~--------------  248 (371)
T 1f8f_A          192 SSFVTWGA-GAVGLSALLAAKVC--GASIIIAVDI--VESRL-ELAKQLGATHVINSKTQDP---V--------------  248 (371)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHH--TCSEEEEEES--CHHHH-HHHHHHTCSEEEETTTSCH---H--------------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHc--CCCeEEEECC--CHHHH-HHHHHcCCCEEecCCccCH---H--------------
Confidence            58999995 99999999999876  44 5776553  44443 5668888877664332221   1              


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcC
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~g  192 (369)
                        +.+.++... .+|+|+++..+-..+.-.+.+++.|
T Consensus       249 --~~~~~~~~g-g~D~vid~~g~~~~~~~~~~~l~~~  282 (371)
T 1f8f_A          249 --AAIKEITDG-GVNFALESTGSPEILKQGVDALGIL  282 (371)
T ss_dssp             --HHHHHHTTS-CEEEEEECSCCHHHHHHHHHTEEEE
T ss_pred             --HHHHHhcCC-CCcEEEECCCCHHHHHHHHHHHhcC
Confidence              122233333 6899999865434444444444443

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=90.93  E-value=0.2  Score=49.84  Aligned_cols=34  Identities=21%  Similarity=0.366  Sum_probs=29.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (369)
                      +++|.|.|+||.||...++-+.+.  .++|++++-.
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~--G~~V~~l~R~  180 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTG--GHEVIQLVRK  180 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECC
Confidence            678999999999999999998876  6899998743

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=90.92  E-value=0.24  Score=44.99  Aligned_cols=32  Identities=22%  Similarity=0.360  Sum_probs=27.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      ++|.|.|+||+||....+-+.+.  .++|+++.-
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r   45 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAA--GHDLVLIHR   45 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHC--CCEEEEEec
Confidence            47999999999999999988875  588998864

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=90.92  E-value=0.23  Score=45.27  Aligned_cols=32  Identities=19%  Similarity=0.363  Sum_probs=27.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      .|+|.|.|+||+||....+-+.+.  .++|+++.
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~--G~~V~~~~   40 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQK--GYAVNTTV   40 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHT--TCEEEEEE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHC--CCEEEEEE
Confidence            468999999999999999988774  68898875

>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*

Probab=90.91  E-value=0.41  Score=46.51  Aligned_cols=111  Identities=17%  Similarity=0.183  Sum_probs=68.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh--hCCCE---EEEcCchhHHHHHHHHhcCCCC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR--FKPQV---VAVRNESLLDEIKEALANVEEK  150 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~--FkP~~---V~v~de~~~~~l~~~l~~~~~~  150 (369)
                      +.||+|.|+ |-||+..++.+.+|| +|+|+++......+.++...+.  -.+++   |...+..        +.-.+..
T Consensus         1 mikVgI~G~-G~iGr~l~R~l~~~~-~veivain~~~~~~~~~~ll~~ds~~G~~~~~v~~~~~~--------l~v~g~~   70 (334)
T 3cmc_O            1 AVKVGINGF-GRIGRNVFRAALKNP-DIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVNGNN--------LVVNGKE   70 (334)
T ss_dssp             CEEEEEESC-SHHHHHHHHHHTTCT-TEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTE--------EEETTEE
T ss_pred             CeEEEEECC-CHHHHHHHHHHhCCC-CeEEEEEeCCCCHHHHHHHhccCCcCCCcCceEEEccCc--------EEECCEE
Confidence            358999999 999999999999887 5999999887777777766631  11211   2111110        0000111


Q ss_pred             ceEEecHHHHHHH-hcCCCCCEEEEeccCccCcHHHHHHHHcCC-ceee
Q 017567          151 PEILAGEQGVIEA-ARHPDAVTVVTGIVGCAGLKPTVAAIEAGK-DIAL  197 (369)
Q Consensus       151 ~~v~~G~~gl~~~-~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK-~iaL  197 (369)
                      +.++.- ....++ ....++|+|+.+.-.+...+-.-+.+++|. ++.+
T Consensus        71 i~v~~~-~dp~~i~w~~~~vDvV~~atg~~~s~e~a~~~l~~Gak~vVI  118 (334)
T 3cmc_O           71 IIVKAE-RDPENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVII  118 (334)
T ss_dssp             EEEECC-SSGGGCCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEE
T ss_pred             EEEEec-CChhhcCcccCccCEEEECCCchhhHHHHHHHHHCCCCEEEE
Confidence            223211 111111 111268999999888888877778889884 3444

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=90.89  E-value=0.21  Score=45.05  Aligned_cols=31  Identities=23%  Similarity=0.373  Sum_probs=26.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      |+|.|.|+||+||....+-+.+.  .++|+++.
T Consensus         2 k~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~   32 (322)
T 2p4h_X            2 GRVCVTGGTGFLGSWIIKSLLEN--GYSVNTTI   32 (322)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEC
T ss_pred             CEEEEECChhHHHHHHHHHHHHC--CCEEEEEE
Confidence            67999999999999999988764  58898875

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=90.89  E-value=1.1  Score=40.98  Aligned_cols=63  Identities=19%  Similarity=0.138  Sum_probs=42.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCCEEEE-cCchhHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQVVAV-RNESLLDEIKE  142 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F---kP~~V~v-~de~~~~~l~~  142 (369)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+  .+|.+.+.+..+++   .++...+ .|-.+.+.++.
T Consensus         8 gk~vlVTGas~GIG~aia~~la~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   74 (280)
T 3tox_A            8 GKIAIVTGASSGIGRAAALLFARE--GAKVVVT--ARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEA   74 (280)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEC--CSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            367999999999999999988876  6777653  46677766666655   3444443 34333444443

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=90.85  E-value=1.6  Score=38.97  Aligned_cols=65  Identities=12%  Similarity=0.059  Sum_probs=39.8

Q ss_pred             eeEEEEecC--ChHhHHHHHHHHhCCCceEEEEEeecCCH-HHHHHHHHhhCCCEEEEcCchhHHHHHHH
Q 017567           77 KPISVLGST--GSIGTQTLDIVAEHEDKFRVVALAAGSNI-TLLADQVKRFKPQVVAVRNESLLDEIKEA  143 (369)
Q Consensus        77 kkI~ILGST--GSIGtqTLdVI~~~pd~F~VvaLaag~Nv-~lL~eQ~~~FkP~~V~v~de~~~~~l~~~  143 (369)
                      |++.|.|+|  |.||..+.+-+.+.  .++|+.+.-.... +.+.+...+.....+...|-.+.+.+++.
T Consensus        10 k~vlVTGas~~~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~   77 (265)
T 1qsg_A           10 KRILVTGVASKLSIAYGIAQAMHRE--GAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTM   77 (265)
T ss_dssp             CEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHH
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHC--CCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHH
Confidence            679999999  99999999988876  5788776432211 33333333332233444555554444443

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=90.71  E-value=1.4  Score=39.34  Aligned_cols=64  Identities=20%  Similarity=0.267  Sum_probs=42.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F---kP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+  .+|.+.+.+...+.   ..+...+ .|-.+.+.+++.
T Consensus         6 ~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   73 (257)
T 3imf_A            6 EKVVIITGGSSGMGKGMATRFAKE--GARVVIT--GRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKM   73 (257)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            468999999999999999988876  5777664  45666666555554   3344333 454444445443

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=90.68  E-value=1.7  Score=37.97  Aligned_cols=64  Identities=14%  Similarity=0.115  Sum_probs=40.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH---HHHhhCCCEEEE-cCchhHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD---QVKRFKPQVVAV-RNESLLDEIKE  142 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~e---Q~~~FkP~~V~v-~de~~~~~l~~  142 (369)
                      .|++.|.|+||.||....+-+.+.  .++|+.+..+ +.+.+.+   .+++..++...+ .|-.+.+.++.
T Consensus         7 ~k~vlITGas~gIG~~~a~~l~~~--G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   74 (255)
T 3icc_A            7 GKVALVTGASRGIGRAIAKRLAND--GALVAIHYGN-RKEEAEETVYEIQSNGGSAFSIGANLESLHGVEA   74 (255)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESS-CSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCeEEEEeCC-chHHHHHHHHHHHhcCCceEEEecCcCCHHHHHH
Confidence            478999999999999999998876  5777765544 4344443   444444444433 34444444443

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=90.61  E-value=0.3  Score=44.20  Aligned_cols=38  Identities=21%  Similarity=0.382  Sum_probs=30.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLL  117 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL  117 (369)
                      .|+|.|.|+||.||....+-+.+.  .++|+++.  ++.+.+
T Consensus        11 ~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~--r~~~~~   48 (342)
T 1y1p_A           11 GSLVLVTGANGFVASHVVEQLLEH--GYKVRGTA--RSASKL   48 (342)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SSHHHH
T ss_pred             CCEEEEECCccHHHHHHHHHHHHC--CCEEEEEe--CCcccH
Confidence            468999999999999999988875  58888875  344443

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=90.61  E-value=0.16  Score=45.06  Aligned_cols=33  Identities=21%  Similarity=0.420  Sum_probs=28.1

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      +|.|.|+||.||....+-+.+.+..++|++++-
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r   33 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVR   33 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEES
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEc
Confidence            589999999999999998887544688999874

>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}

Probab=90.61  E-value=0.37  Score=40.33  Aligned_cols=33  Identities=15%  Similarity=0.262  Sum_probs=25.8

Q ss_pred             CCCeeEEEEecC---ChHhHHHHHHHHhCCCceEEEEE
Q 017567           74 DGPKPISVLGST---GSIGTQTLDIVAEHEDKFRVVAL  108 (369)
Q Consensus        74 ~~~kkI~ILGST---GSIGtqTLdVI~~~pd~F~VvaL  108 (369)
                      ..||+|+|+|++   |++|...++-+.++  .|+|+.+
T Consensus         2 ~~p~siAVVGaS~~~~~~g~~v~~~L~~~--g~~V~pV   37 (122)
T 3ff4_A            2 NAMKKTLILGATPETNRYAYLAAERLKSH--GHEFIPV   37 (122)
T ss_dssp             CCCCCEEEETCCSCTTSHHHHHHHHHHHH--TCCEEEE
T ss_pred             CCCCEEEEEccCCCCCCHHHHHHHHHHHC--CCeEEEE
Confidence            358899999997   78999999888875  4666554

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=90.57  E-value=1.1  Score=39.80  Aligned_cols=86  Identities=14%  Similarity=0.130  Sum_probs=51.4

Q ss_pred             CeeEEEEecC--ChHhHHHHHHHHhCCCceEEEEEeecCC---HHHHHHHHHhhCCCEEEE-cCchhHHHHHHHHhcCCC
Q 017567           76 PKPISVLGST--GSIGTQTLDIVAEHEDKFRVVALAAGSN---ITLLADQVKRFKPQVVAV-RNESLLDEIKEALANVEE  149 (369)
Q Consensus        76 ~kkI~ILGST--GSIGtqTLdVI~~~pd~F~VvaLaag~N---v~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~l~~~~~  149 (369)
                      .|++.|.|+|  |.||..+..-+.+.  .++|+.+..+..   -+.+.+..+++..+...+ .|-.+.+.+++.+.    
T Consensus        20 ~k~vlITGas~~~giG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~----   93 (267)
T 3gdg_A           20 GKVVVVTGASGPKGMGIEAARGCAEM--GAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVK----   93 (267)
T ss_dssp             TCEEEETTCCSSSSHHHHHHHHHHHT--SCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHH----
T ss_pred             CCEEEEECCCCCCChHHHHHHHHHHC--CCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHH----
Confidence            3689999999  89999999988876  677776654432   233444444555554443 34344444444321    


Q ss_pred             CceEEecHHHHHHHhcCCCCCEEEEeccCc
Q 017567          150 KPEILAGEQGVIEAARHPDAVTVVTGIVGC  179 (369)
Q Consensus       150 ~~~v~~G~~gl~~~~~~~~~D~Vv~AIvG~  179 (369)
                               .+.+  ....+|+||+. +|.
T Consensus        94 ---------~~~~--~~g~id~li~n-Ag~  111 (267)
T 3gdg_A           94 ---------DVVA--DFGQIDAFIAN-AGA  111 (267)
T ss_dssp             ---------HHHH--HTSCCSEEEEC-CCC
T ss_pred             ---------HHHH--HcCCCCEEEEC-CCc
Confidence                     1111  23468999986 343

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=90.52  E-value=0.41  Score=44.72  Aligned_cols=52  Identities=15%  Similarity=0.201  Sum_probs=38.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEc
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVR  132 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~  132 (369)
                      -++|.|.|++|.||..++.+.+..  ..+|++.....  +++ +.++++..+.+.-.
T Consensus       145 g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~--~~~-~~~~~lga~~~~~~  196 (340)
T 3gms_A          145 NDVLLVNACGSAIGHLFAQLSQIL--NFRLIAVTRNN--KHT-EELLRLGAAYVIDT  196 (340)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSS--TTH-HHHHHHTCSEEEET
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHc--CCEEEEEeCCH--HHH-HHHHhCCCcEEEeC
Confidence            368999999999999999999976  56888876432  222 34566777776543

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=90.50  E-value=0.55  Score=44.63  Aligned_cols=91  Identities=9%  Similarity=0.180  Sum_probs=57.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .+|.|+|+ |.||..++.+.+..  .. +|+++...  -+++ +.++++..+.+.-..+.. +.+.              
T Consensus       195 ~~VlV~Ga-G~vG~~a~q~a~~~--Ga~~Vi~~~~~--~~~~-~~a~~lGa~~vi~~~~~~-~~~~--------------  253 (378)
T 3uko_A          195 SNVAIFGL-GTVGLAVAEGAKTA--GASRIIGIDID--SKKY-ETAKKFGVNEFVNPKDHD-KPIQ--------------  253 (378)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHH--TCSCEEEECSC--TTHH-HHHHTTTCCEEECGGGCS-SCHH--------------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHc--CCCeEEEEcCC--HHHH-HHHHHcCCcEEEccccCc-hhHH--------------
Confidence            58999998 99999999999976  45 57775433  3344 467889888765432100 0111              


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHc
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEA  191 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~  191 (369)
                        +.+.++... .+|+|+++..+-..+.-.+.+++.
T Consensus       254 --~~i~~~~~g-g~D~vid~~g~~~~~~~~~~~l~~  286 (378)
T 3uko_A          254 --EVIVDLTDG-GVDYSFECIGNVSVMRAALECCHK  286 (378)
T ss_dssp             --HHHHHHTTS-CBSEEEECSCCHHHHHHHHHTBCT
T ss_pred             --HHHHHhcCC-CCCEEEECCCCHHHHHHHHHHhhc
Confidence              122333333 699999986654556666666665

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=90.40  E-value=0.26  Score=46.02  Aligned_cols=32  Identities=22%  Similarity=0.279  Sum_probs=28.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      |+|.|.|+||+||....+-+.+.  .++|+++.-
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~--g~~V~~~~r   60 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGK--GYEVHGLIR   60 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEEC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHC--CCEEEEEec
Confidence            78999999999999999988875  588988864

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=90.39  E-value=0.86  Score=41.35  Aligned_cols=32  Identities=22%  Similarity=0.249  Sum_probs=26.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.
T Consensus        23 ~k~~lVTGas~gIG~aia~~L~~~--G~~V~~~~   54 (288)
T 2x9g_A           23 APAAVVTGAAKRIGRAIAVKLHQT--GYRVVIHY   54 (288)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHH--TCEEEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCeEEEEe
Confidence            368999999999999999988875  57777654

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=90.36  E-value=0.88  Score=42.25  Aligned_cols=66  Identities=24%  Similarity=0.228  Sum_probs=44.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec-----------CCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-----------SNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag-----------~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.-+           ...+.+.+.+++..++...+ .|-.+.+.+++.
T Consensus        27 gk~vlVTGas~GIG~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  104 (322)
T 3qlj_A           27 GRVVIVTGAGGGIGRAHALAFAAE--GARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL  104 (322)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            368999999999999999988876  6788776432           34566666666666655544 444444444443

>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}

Probab=90.36  E-value=1.7  Score=40.19  Aligned_cols=125  Identities=10%  Similarity=0.110  Sum_probs=71.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .+||+|+|+ |.||++--..+++.  .++|++....       +.++...  ++++.+....+-+++             
T Consensus         6 ~mkI~IIG~-G~~G~sLA~~L~~~--G~~V~~~~~~-------~~~~~aD--ilavP~~ai~~vl~~-------------   60 (232)
T 3dfu_A            6 RLRVGIFDD-GSSTVNMAEKLDSV--GHYVTVLHAP-------EDIRDFE--LVVIDAHGVEGYVEK-------------   60 (232)
T ss_dssp             CCEEEEECC-SCCCSCHHHHHHHT--TCEEEECSSG-------GGGGGCS--EEEECSSCHHHHHHH-------------
T ss_pred             CcEEEEEee-CHHHHHHHHHHHHC--CCEEEEecCH-------HHhccCC--EEEEcHHHHHHHHHH-------------
Confidence            358999995 99999988888876  5788875542       1233322  777766532222222             


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCcee----eecccceeeccc-----chhHHhhhcCCeEeeccc
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA----LANKETLIAGGP-----FVLPLAHKHNIKILPADS  226 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~ia----LANKEsLV~aG~-----li~~~a~k~~~~IlPVDS  226 (369)
                             +......+.+|.-.+|..+....-.+.+.|....    ++..-..+++++     .+.++++..|.+++.+|+
T Consensus        61 -------l~~~l~~g~ivvd~sgs~~~~vl~~~~~~g~~fvg~HPm~g~~~~i~a~d~~a~~~l~~L~~~lG~~vv~~~~  133 (232)
T 3dfu_A           61 -------LSAFARRGQMFLHTSLTHGITVMDPLETSGGIVMSAHPIGQDRWVASALDELGETIVGLLVGELGGSIVEIAD  133 (232)
T ss_dssp             -------HHTTCCTTCEEEECCSSCCGGGGHHHHHTTCEEEEEEEEETTEEEEEESSHHHHHHHHHHHHHTTCEECCCCG
T ss_pred             -------HHHhcCCCCEEEEECCcCHHHHHHHHHhCCCcEEEeeeCCCCceeeeCCCHHHHHHHHHHHHHhCCEEEEeCH
Confidence                   2222233444444455544433333334443211    112223333333     467788889999999999


Q ss_pred             chhhHH
Q 017567          227 EHSAIF  232 (369)
Q Consensus       227 EHsAIf  232 (369)
                      |+...|
T Consensus       134 ~~hd~~  139 (232)
T 3dfu_A          134 DKRAQL  139 (232)
T ss_dssp             GGHHHH
T ss_pred             HHHhHH
Confidence            887776

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=90.35  E-value=1.2  Score=40.02  Aligned_cols=66  Identities=15%  Similarity=0.109  Sum_probs=42.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee-cCCHHHHHHHHHh---hCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA-GSNITLLADQVKR---FKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa-g~Nv~lL~eQ~~~---FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||-||..+..-+.+.  .++|+.+.- .+|.+.+.+...+   ...+...+ .|-.+.+.+++.
T Consensus        11 ~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   81 (262)
T 3ksu_A           11 NKVIVIAGGIKNLGALTAKTFALE--SVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKL   81 (262)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHTTS--SCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            368999999999999999888875  677877642 4455555544444   34444433 344444444443

>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O

Probab=90.35  E-value=0.55  Score=45.58  Aligned_cols=111  Identities=16%  Similarity=0.165  Sum_probs=67.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee-cCCHHHHHHHH--HhhCCCE----EEEcCchhHHHHHHHHhcCCC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA-GSNITLLADQV--KRFKPQV----VAVRNESLLDEIKEALANVEE  149 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa-g~Nv~lL~eQ~--~~FkP~~----V~v~de~~~~~l~~~l~~~~~  149 (369)
                      .||+|.|. |-||+..++.+.++|+ |+|+++.. ..+.+.++...  ..-.+++    +...++..       +.-.+.
T Consensus         4 ikVgI~G~-GrIGr~l~R~l~~~p~-vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~-------l~~~g~   74 (337)
T 3e5r_O            4 IKIGINGF-GRIGRLVARVALQSED-VELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKT-------LLLGEK   74 (337)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTCSS-EEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSE-------EEETTE
T ss_pred             eEEEEECc-CHHHHHHHHHHhCCCC-eEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCe-------eEECCe
Confidence            48999999 9999999999998875 99999987 46777766655  2222321    11101100       000001


Q ss_pred             CceEEecHHHHHHH-hcCCCCCEEEEeccCccCcHHHHHHHHcCCc-eee
Q 017567          150 KPEILAGEQGVIEA-ARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD-IAL  197 (369)
Q Consensus       150 ~~~v~~G~~gl~~~-~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~-iaL  197 (369)
                      .+.++.- ....++ ....++|+|+.+...+...+-..+++++|++ +.+
T Consensus        75 ~i~v~~~-~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l~aGak~VVI  123 (337)
T 3e5r_O           75 PVTVFGI-RNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVI  123 (337)
T ss_dssp             EEEEECC-SCGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEE
T ss_pred             EEEEEec-CChHHccccccCCCEEEECCCchhhHHHHHHHHHcCCCEEEE
Confidence            1222211 111121 0112589999998888888888889999973 443

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=90.25  E-value=1.8  Score=39.69  Aligned_cols=83  Identities=11%  Similarity=0.027  Sum_probs=52.8

Q ss_pred             CeeEEEEecCC--hHhHHHHHHHHhCCCceEEEEEeec-CCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCce
Q 017567           76 PKPISVLGSTG--SIGTQTLDIVAEHEDKFRVVALAAG-SNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPE  152 (369)
Q Consensus        76 ~kkI~ILGSTG--SIGtqTLdVI~~~pd~F~VvaLaag-~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~  152 (369)
                      .|++.|.|+||  .||..+.+-+.+.  .++|+.+.-. ...+.+.+.++++....+...|-.+.+.+++.+.       
T Consensus        30 ~k~vlVTGasg~~GIG~~ia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~-------  100 (296)
T 3k31_A           30 GKKGVIIGVANDKSLAWGIAKAVCAQ--GAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFK-------  100 (296)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHH-------
T ss_pred             CCEEEEEeCCCCCCHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHH-------
Confidence            47899999998  9999999988876  6777665432 2245566666666544445566555555555432       


Q ss_pred             EEecHHHHHHHhcCCCCCEEEEe
Q 017567          153 ILAGEQGVIEAARHPDAVTVVTG  175 (369)
Q Consensus       153 v~~G~~gl~~~~~~~~~D~Vv~A  175 (369)
                            .+.+  +...+|++|+.
T Consensus       101 ------~~~~--~~g~iD~lVnn  115 (296)
T 3k31_A          101 ------VLAE--EWGSLDFVVHA  115 (296)
T ss_dssp             ------HHHH--HHSCCSEEEEC
T ss_pred             ------HHHH--HcCCCCEEEEC
Confidence                  1111  12368999986

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=90.24  E-value=0.18  Score=46.83  Aligned_cols=35  Identities=14%  Similarity=0.347  Sum_probs=30.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN  113 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~N  113 (369)
                      |.||+|+|+ |.+|+...+.+.+.++  +|++..-.++
T Consensus         3 MmkI~ViGa-GrMG~~i~~~l~~~~~--eLva~~d~~~   37 (243)
T 3qy9_A            3 SMKILLIGY-GAMNQRVARLAEEKGH--EIVGVIENTP   37 (243)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEECSSC
T ss_pred             ceEEEEECc-CHHHHHHHHHHHhCCC--EEEEEEecCc
Confidence            568999999 9999999999999887  8998766543

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=90.20  E-value=0.25  Score=44.99  Aligned_cols=34  Identities=21%  Similarity=0.413  Sum_probs=28.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      ++|.|.|+||.||....+-+.+....++|+++.-
T Consensus         4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r   37 (336)
T 2hun_A            4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDK   37 (336)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred             CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence            4699999999999999998887544589999864

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=90.19  E-value=0.77  Score=41.43  Aligned_cols=30  Identities=23%  Similarity=0.410  Sum_probs=25.9

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      +|.|.|+||.||....+-+.+.  .++|+++.
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~   31 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLAR--GLEVAVLD   31 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTT--TCEEEEEC
T ss_pred             EEEEEeCCcHHHHHHHHHHHHC--CCEEEEEE
Confidence            6999999999999999988764  57888875

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=90.12  E-value=0.84  Score=42.24  Aligned_cols=64  Identities=20%  Similarity=0.196  Sum_probs=40.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---C-CCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---K-PQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F---k-P~~V~v-~de~~~~~l~~~  143 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.  +|.+.+.+...++   . .+...+ .|-.+.+.+++.
T Consensus        41 ~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~--r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~  109 (293)
T 3rih_A           41 ARSVLVTGGTKGIGRGIATVFARA--GANVAVAA--RSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADA  109 (293)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEE--SSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHH
Confidence            468999999999999999988876  67787654  4444444444443   3 233333 454444444443

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=90.11  E-value=0.19  Score=44.95  Aligned_cols=32  Identities=19%  Similarity=0.185  Sum_probs=26.5

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      +|.|.|+||.||...++-+.+.+ .++|++++-
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~-g~~V~~~~R   33 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANH-IDHFHIGVR   33 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTT-CTTEEEEES
T ss_pred             EEEEEcCCchHHHHHHHHHhhCC-CCcEEEEEC
Confidence            69999999999999999987642 477888763

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=90.10  E-value=0.79  Score=43.41  Aligned_cols=92  Identities=14%  Similarity=0.103  Sum_probs=56.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .+|.|+|+ |.||..++.+.+..  .. +|++....  -+++ +.++++..+.+.-..+.. +.+.              
T Consensus       197 ~~VlV~Ga-G~vG~~aiqlak~~--Ga~~Vi~~~~~--~~~~-~~a~~lGa~~vi~~~~~~-~~~~--------------  255 (376)
T 1e3i_A          197 STCAVFGL-GCVGLSAIIGCKIA--GASRIIAIDIN--GEKF-PKAKALGATDCLNPRELD-KPVQ--------------  255 (376)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT--TCSEEEEECSC--GGGH-HHHHHTTCSEEECGGGCS-SCHH--------------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHc--CCCeEEEEcCC--HHHH-HHHHHhCCcEEEcccccc-chHH--------------
Confidence            58999996 99999999999986  45 67776532  2332 456778877664322100 0011              


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcC
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~g  192 (369)
                        +.+.++... .+|+|++++.+-..+.-.+.+++.|
T Consensus       256 --~~v~~~~~~-g~Dvvid~~G~~~~~~~~~~~l~~~  289 (376)
T 1e3i_A          256 --DVITELTAG-GVDYSLDCAGTAQTLKAAVDCTVLG  289 (376)
T ss_dssp             --HHHHHHHTS-CBSEEEESSCCHHHHHHHHHTBCTT
T ss_pred             --HHHHHHhCC-CccEEEECCCCHHHHHHHHHHhhcC
Confidence              122333333 6999999875544555555555554

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=90.06  E-value=1  Score=40.94  Aligned_cols=30  Identities=27%  Similarity=0.404  Sum_probs=26.3

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      +|.|.|+||.||....+-+.+.  .++|+++.
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~   31 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQN--GHDVIILD   31 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHT--TCEEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHC--CCEEEEEe
Confidence            6999999999999999988775  58898875

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=90.05  E-value=0.28  Score=46.14  Aligned_cols=34  Identities=21%  Similarity=0.183  Sum_probs=29.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (369)
                      +|+|.|.|+||+||....+-+.+.  .++|+++.-.
T Consensus        29 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~   62 (379)
T 2c5a_A           29 NLKISITGAGGFIASHIARRLKHE--GHYVIASDWK   62 (379)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESS
T ss_pred             CCeEEEECCccHHHHHHHHHHHHC--CCeEEEEECC
Confidence            578999999999999999988875  5889988643

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=90.02  E-value=0.27  Score=45.39  Aligned_cols=33  Identities=21%  Similarity=0.328  Sum_probs=28.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      +|+|.|.|+||.||....+-+.+.  .++|+++.-
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r   33 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEK--GYEVHGIKR   33 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEEC
Confidence            468999999999999999988875  578988763

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=89.96  E-value=0.68  Score=43.30  Aligned_cols=89  Identities=16%  Similarity=0.185  Sum_probs=55.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      ++|.|.|+ |.||..++.+.+..  ..+|+++.  ++-+++ +.++++..+.+.-..+..   +.               
T Consensus       166 ~~VlV~Ga-G~vG~~~~~~a~~~--Ga~Vi~~~--~~~~~~-~~~~~lGa~~~~d~~~~~---~~---------------  221 (339)
T 1rjw_A          166 EWVAIYGI-GGLGHVAVQYAKAM--GLNVVAVD--IGDEKL-ELAKELGADLVVNPLKED---AA---------------  221 (339)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHT--TCEEEEEC--SCHHHH-HHHHHTTCSEEECTTTSC---HH---------------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHc--CCEEEEEe--CCHHHH-HHHHHCCCCEEecCCCcc---HH---------------
Confidence            58999999 88999999999986  46887755  344554 456778877654221111   11               


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcC
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~g  192 (369)
                       +.+.++.  ..+|+|+++..+...+.-.+.+++.|
T Consensus       222 -~~~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~  254 (339)
T 1rjw_A          222 -KFMKEKV--GGVHAAVVTAVSKPAFQSAYNSIRRG  254 (339)
T ss_dssp             -HHHHHHH--SSEEEEEESSCCHHHHHHHHHHEEEE
T ss_pred             -HHHHHHh--CCCCEEEECCCCHHHHHHHHHHhhcC
Confidence             1223333  36999999865434444444444443

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=89.91  E-value=1.2  Score=40.64  Aligned_cols=54  Identities=13%  Similarity=0.123  Sum_probs=37.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec-CCHHHHHHHHHhhCCCEEEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-SNITLLADQVKRFKPQVVAV  131 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag-~Nv~lL~eQ~~~FkP~~V~v  131 (369)
                      .|++.|.|+||-||..+..-+.+.  .++|+.+.-. ...+.+.+.+++...+...+
T Consensus        33 gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~   87 (275)
T 4imr_A           33 GRTALVTGSSRGIGAAIAEGLAGA--GAHVILHGVKPGSTAAVQQRIIASGGTAQEL   87 (275)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSTTTTHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEE
Confidence            368999999999999999998876  5677765432 23455555555555555444

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=89.85  E-value=0.44  Score=41.16  Aligned_cols=33  Identities=21%  Similarity=0.339  Sum_probs=27.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (369)
                      |++.|.|+||.||....+-+.+.  .++|+++.-.
T Consensus         3 k~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~   35 (242)
T 1uay_A            3 RSALVTGGASGLGRAAALALKAR--GYRVVVLDLR   35 (242)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHH--TCEEEEEESS
T ss_pred             CEEEEeCCCChHHHHHHHHHHHC--CCEEEEEccC
Confidence            68999999999999999988875  5788877543

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=89.81  E-value=2.4  Score=38.04  Aligned_cols=66  Identities=11%  Similarity=0.014  Sum_probs=39.8

Q ss_pred             CeeEEEEecC--ChHhHHHHHHHHhCCCceEEEEEeecCCH-HHHHHHHHhhCCCEEEEcCchhHHHHHHH
Q 017567           76 PKPISVLGST--GSIGTQTLDIVAEHEDKFRVVALAAGSNI-TLLADQVKRFKPQVVAVRNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGST--GSIGtqTLdVI~~~pd~F~VvaLaag~Nv-~lL~eQ~~~FkP~~V~v~de~~~~~l~~~  143 (369)
                      .|++.|.|+|  |.||..+.+-+.+.  .++|+.+.-.... +.+.+...++..-.+...|-.+.+.+++.
T Consensus         6 ~k~vlVTGas~~~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~   74 (275)
T 2pd4_A            6 GKKGLIVGVANNKSIAYGIAQSCFNQ--GATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSL   74 (275)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHTT--TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHH
Confidence            3689999999  99999999998876  5788776533221 23333333332222333555555445443

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=89.72  E-value=0.69  Score=44.33  Aligned_cols=45  Identities=13%  Similarity=0.059  Sum_probs=34.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQ  127 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaag~Nv~lL~eQ~~~FkP~  127 (369)
                      .+|.|+|+ |.||..++.+.+..  .. +|++..  +|-+++ +.++++..+
T Consensus       187 ~~VlV~Ga-G~vG~~aiqlak~~--Ga~~Vi~~~--~~~~~~-~~a~~lGa~  232 (398)
T 2dph_A          187 SHVYIAGA-GPVGRCAAAGARLL--GAACVIVGD--QNPERL-KLLSDAGFE  232 (398)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHH--TCSEEEEEE--SCHHHH-HHHHTTTCE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHc--CCCEEEEEc--CCHHHH-HHHHHcCCc
Confidence            58999997 99999999999876  45 677765  344444 567888874

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=89.63  E-value=2.5  Score=37.44  Aligned_cols=47  Identities=11%  Similarity=0.079  Sum_probs=34.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhC-CCceEEEEEeecCCHHHHHHHHHhh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEH-EDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~-pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      .|++.|.|+||-||..+..-+.+. ...++|+.+.  +|.+.+.+...+.
T Consensus         6 ~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~--r~~~~~~~~~~~l   53 (259)
T 1oaa_A            6 CAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSA--RSESMLRQLKEEL   53 (259)
T ss_dssp             SEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEE--SCHHHHHHHHHHH
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEe--CCHHHHHHHHHHH
Confidence            478999999999999999988862 2367887753  5666655544443

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=89.60  E-value=0.82  Score=41.93  Aligned_cols=32  Identities=22%  Similarity=0.373  Sum_probs=26.9

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      ||.|.|+||.||....+-+.+.+ .++|+++.-
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~-g~~V~~~~r   33 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNT-QDTVVNIDK   33 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHC-SCEEEEEEC
T ss_pred             EEEEECCCchHhHHHHHHHHhcC-CCeEEEEec
Confidence            69999999999999999888742 478988863

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=89.54  E-value=1.6  Score=39.31  Aligned_cols=44  Identities=23%  Similarity=0.281  Sum_probs=32.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~  123 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+  .+|.+.+.+..++
T Consensus        20 ~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~--~r~~~~~~~~~~~   63 (266)
T 4egf_A           20 GKRALITGATKGIGADIARAFAAA--GARLVLS--GRDVSELDAARRA   63 (266)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHH
Confidence            368999999999999999998876  5677654  3566666554444

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=89.52  E-value=0.95  Score=42.81  Aligned_cols=92  Identities=13%  Similarity=0.175  Sum_probs=55.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .+|.|.|+ |.||..++.+.+..  .. +|++.....  +++ +.++++..+.+.-..+.. +.+.              
T Consensus       194 ~~VlV~Ga-G~vG~~a~qla~~~--Ga~~Vi~~~~~~--~~~-~~~~~lGa~~vi~~~~~~-~~~~--------------  252 (374)
T 1cdo_A          194 STCAVFGL-GAVGLAAVMGCHSA--GAKRIIAVDLNP--DKF-EKAKVFGATDFVNPNDHS-EPIS--------------  252 (374)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT--TCSEEEEECSCG--GGH-HHHHHTTCCEEECGGGCS-SCHH--------------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHc--CCCEEEEEcCCH--HHH-HHHHHhCCceEEeccccc-hhHH--------------
Confidence            58999996 99999999999986  45 677765332  222 345678877664322100 0011              


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcC
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~g  192 (369)
                        +.+.++... .+|+|++++.+-..+.-.+.+++.|
T Consensus       253 --~~~~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~  286 (374)
T 1cdo_A          253 --QVLSKMTNG-GVDFSLECVGNVGVMRNALESCLKG  286 (374)
T ss_dssp             --HHHHHHHTS-CBSEEEECSCCHHHHHHHHHTBCTT
T ss_pred             --HHHHHHhCC-CCCEEEECCCCHHHHHHHHHHhhcC
Confidence              122333333 6999999875544455555555544

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=89.51  E-value=1.1  Score=42.64  Aligned_cols=89  Identities=15%  Similarity=0.259  Sum_probs=58.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      ++|.|+|+ |.||..++.+.+..  ..+|++....  -+++....+++..+.+.-..+  .+                  
T Consensus       189 ~~VlV~Ga-G~vG~~~~q~a~~~--Ga~Vi~~~~~--~~~~~~~~~~lGa~~v~~~~~--~~------------------  243 (366)
T 1yqd_A          189 KHIGIVGL-GGLGHVAVKFAKAF--GSKVTVISTS--PSKKEEALKNFGADSFLVSRD--QE------------------  243 (366)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESC--GGGHHHHHHTSCCSEEEETTC--HH------------------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHC--CCEEEEEeCC--HHHHHHHHHhcCCceEEeccC--HH------------------
Confidence            58999996 99999999999986  4688876643  344433344777776543221  11                  


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCc
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~  194 (369)
                        .+.++.  ..+|+|+++..+...+...+.+++.|-+
T Consensus       244 --~~~~~~--~~~D~vid~~g~~~~~~~~~~~l~~~G~  277 (366)
T 1yqd_A          244 --QMQAAA--GTLDGIIDTVSAVHPLLPLFGLLKSHGK  277 (366)
T ss_dssp             --HHHHTT--TCEEEEEECCSSCCCSHHHHHHEEEEEE
T ss_pred             --HHHHhh--CCCCEEEECCCcHHHHHHHHHHHhcCCE
Confidence              122222  2599999997766677777777665433

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=89.42  E-value=0.25  Score=44.75  Aligned_cols=32  Identities=28%  Similarity=0.480  Sum_probs=24.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      ||+|.|.|+||+||....+-+.+..   .++++..
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g---~~v~~~~   32 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESN---EIVVIDN   32 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTS---CEEEECC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCC---CEEEEEc
Confidence            5789999999999999999888753   5666654

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=89.40  E-value=0.56  Score=44.70  Aligned_cols=95  Identities=14%  Similarity=0.147  Sum_probs=57.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEcCchh-HHHHHHHHhcCCCCceEE
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESL-LDEIKEALANVEEKPEIL  154 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~-~~~l~~~l~~~~~~~~v~  154 (369)
                      .+|.|.|+ |.||..++.+.+..  .+ +|++..  ++-+++ +.++++..+.+.-..+.. .+.+++..          
T Consensus       184 ~~VlV~Ga-G~vG~~aiqlak~~--Ga~~Vi~~~--~~~~~~-~~a~~lGa~~vi~~~~~~~~~~i~~~~----------  247 (370)
T 4ej6_A          184 STVAILGG-GVIGLLTVQLARLA--GATTVILST--RQATKR-RLAEEVGATATVDPSAGDVVEAIAGPV----------  247 (370)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT--TCSEEEEEC--SCHHHH-HHHHHHTCSEEECTTSSCHHHHHHSTT----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHc--CCCEEEEEC--CCHHHH-HHHHHcCCCEEECCCCcCHHHHHHhhh----------
Confidence            58999998 99999999999986  45 666654  344443 577888887765432222 11111100          


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCce
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~i  195 (369)
                             .+.. ..+|+|++++.+-..+.-.+.+++.|-++
T Consensus       248 -------~~~~-gg~Dvvid~~G~~~~~~~~~~~l~~~G~v  280 (370)
T 4ej6_A          248 -------GLVP-GGVDVVIECAGVAETVKQSTRLAKAGGTV  280 (370)
T ss_dssp             -------SSST-TCEEEEEECSCCHHHHHHHHHHEEEEEEE
T ss_pred             -------hccC-CCCCEEEECCCCHHHHHHHHHHhccCCEE
Confidence                   0111 26999999865444455555555554443

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=89.38  E-value=0.37  Score=45.11  Aligned_cols=91  Identities=14%  Similarity=0.125  Sum_probs=56.1

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceE
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI  153 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v  153 (369)
                      ...+|.|+|+ |.||..++.+.+..  .. +|++..  ++-+++ +.++++ .+.+.-.++..   +.            
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~--Ga~~Vi~~~--~~~~~~-~~~~~l-a~~v~~~~~~~---~~------------  221 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRAS--GAGPILVSD--PNPYRL-AFARPY-ADRLVNPLEED---LL------------  221 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHT--TCCSEEEEC--SCHHHH-GGGTTT-CSEEECTTTSC---HH------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHc--CCCEEEEEC--CCHHHH-HHHHHh-HHhccCcCccC---HH------------
Confidence            3458999999 99999999999986  45 677765  344443 456677 66654322211   11            


Q ss_pred             EecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcC
Q 017567          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (369)
Q Consensus       154 ~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~g  192 (369)
                          +.+.++. ...+|+|++++.+...+.-.+.+++.|
T Consensus       222 ----~~~~~~~-~~g~D~vid~~g~~~~~~~~~~~l~~~  255 (343)
T 2dq4_A          222 ----EVVRRVT-GSGVEVLLEFSGNEAAIHQGLMALIPG  255 (343)
T ss_dssp             ----HHHHHHH-SSCEEEEEECSCCHHHHHHHHHHEEEE
T ss_pred             ----HHHHHhc-CCCCCEEEECCCCHHHHHHHHHHHhcC
Confidence                1223333 346999999976544555555555443

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=89.34  E-value=1.2  Score=40.49  Aligned_cols=64  Identities=17%  Similarity=0.057  Sum_probs=40.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH---HHHhhCCCEE-EEcCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD---QVKRFKPQVV-AVRNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~e---Q~~~FkP~~V-~v~de~~~~~l~~~  143 (369)
                      .|.+.|.|+||-||..+.+-+.+.  .++|+.+.  +|-+.+.+   .+++...+.. ...|-.+.+.+++.
T Consensus        28 ~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   95 (270)
T 3ftp_A           28 KQVAIVTGASRGIGRAIALELARR--GAMVIGTA--TTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDAL   95 (270)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEE--SSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHH
Confidence            468999999999999999988876  67777654  45554444   4444444333 23454444444443

>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1

Probab=89.28  E-value=0.74  Score=43.40  Aligned_cols=33  Identities=21%  Similarity=0.189  Sum_probs=27.4

Q ss_pred             CCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEE
Q 017567           73 WDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVA  107 (369)
Q Consensus        73 ~~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~Vva  107 (369)
                      ++..+||+|.|+||..|+..++-++++  .|++++
T Consensus         4 ~~~~~~VaVvGasG~~G~~~~~~l~~~--g~~~v~   36 (288)
T 1oi7_A            4 VNRETRVLVQGITGREGQFHTKQMLTY--GTKIVA   36 (288)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHH--TCEEEE
T ss_pred             cCCCCEEEEECCCCCHHHHHHHHHHHc--CCeEEE
Confidence            355679999999999999999988876  588664

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=89.26  E-value=2.1  Score=38.67  Aligned_cols=83  Identities=16%  Similarity=0.092  Sum_probs=47.7

Q ss_pred             CeeEEEEecC--ChHhHHHHHHHHhCCCceEEEEEeecCCH-HHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCce
Q 017567           76 PKPISVLGST--GSIGTQTLDIVAEHEDKFRVVALAAGSNI-TLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPE  152 (369)
Q Consensus        76 ~kkI~ILGST--GSIGtqTLdVI~~~pd~F~VvaLaag~Nv-~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~  152 (369)
                      .|++.|.|+|  |.||..+..-+.+.  .++|+.+.-.... +.+.+...++..-.+...|-.+.+.+++.+.       
T Consensus        21 ~k~vlVTGas~~~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~-------   91 (285)
T 2p91_A           21 GKRALITGVANERSIAYGIAKSFHRE--GAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKK-------   91 (285)
T ss_dssp             TCEEEECCCSSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHH-------
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHH-------
Confidence            3689999999  99999999988876  5778776433211 2333333333212233345444444444331       


Q ss_pred             EEecHHHHHHHhcCCCCCEEEEe
Q 017567          153 ILAGEQGVIEAARHPDAVTVVTG  175 (369)
Q Consensus       153 v~~G~~gl~~~~~~~~~D~Vv~A  175 (369)
                            .+.  .....+|+||+.
T Consensus        92 ------~~~--~~~g~iD~lv~~  106 (285)
T 2p91_A           92 ------FLE--ENWGSLDIIVHS  106 (285)
T ss_dssp             ------HHH--HHTSCCCEEEEC
T ss_pred             ------HHH--HHcCCCCEEEEC
Confidence                  111  123468999986

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=89.21  E-value=1.2  Score=42.12  Aligned_cols=92  Identities=10%  Similarity=0.101  Sum_probs=56.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .+|.|+|+ |.||..++.+.+..  .. +|++....  -+++ +.++++..+.+.-.++.. +.+.              
T Consensus       193 ~~VlV~Ga-G~vG~~a~qla~~~--Ga~~Vi~~~~~--~~~~-~~~~~lGa~~vi~~~~~~-~~~~--------------  251 (374)
T 2jhf_A          193 STCAVFGL-GGVGLSVIMGCKAA--GAARIIGVDIN--KDKF-AKAKEVGATECVNPQDYK-KPIQ--------------  251 (374)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT--TCSEEEEECSC--GGGH-HHHHHTTCSEEECGGGCS-SCHH--------------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHc--CCCeEEEEcCC--HHHH-HHHHHhCCceEecccccc-hhHH--------------
Confidence            58999995 99999999999986  45 67776532  2222 345778877664322100 0011              


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcC
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~g  192 (369)
                        +.+.++... .+|+|++++.+-..+.-.+.+++.|
T Consensus       252 --~~~~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~  285 (374)
T 2jhf_A          252 --EVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEA  285 (374)
T ss_dssp             --HHHHHHTTS-CBSEEEECSCCHHHHHHHHHHBCTT
T ss_pred             --HHHHHHhCC-CCcEEEECCCCHHHHHHHHHHhhcC
Confidence              122333333 6999999976545555556666554

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=89.19  E-value=0.8  Score=42.66  Aligned_cols=89  Identities=15%  Similarity=0.203  Sum_probs=56.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      ++|.|.|+ |.||..++.+.+..  ..+|++...  +-+++ +.++++..+.+.-..+...   .               
T Consensus       168 ~~VlV~Ga-G~vG~~a~qla~~~--Ga~Vi~~~~--~~~~~-~~~~~lGa~~~i~~~~~~~---~---------------  223 (340)
T 3s2e_A          168 QWVVISGI-GGLGHVAVQYARAM--GLRVAAVDI--DDAKL-NLARRLGAEVAVNARDTDP---A---------------  223 (340)
T ss_dssp             SEEEEECC-STTHHHHHHHHHHT--TCEEEEEES--CHHHH-HHHHHTTCSEEEETTTSCH---H---------------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHC--CCeEEEEeC--CHHHH-HHHHHcCCCEEEeCCCcCH---H---------------
Confidence            57999997 89999999999987  568888754  34444 4678898888765433221   1               


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcC
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~g  192 (369)
                       +.+.+ .. ..+|.|+++..+-..+.-.+.+++.|
T Consensus       224 -~~~~~-~~-g~~d~vid~~g~~~~~~~~~~~l~~~  256 (340)
T 3s2e_A          224 -AWLQK-EI-GGAHGVLVTAVSPKAFSQAIGMVRRG  256 (340)
T ss_dssp             -HHHHH-HH-SSEEEEEESSCCHHHHHHHHHHEEEE
T ss_pred             -HHHHH-hC-CCCCEEEEeCCCHHHHHHHHHHhccC
Confidence             11222 11 25888888865544444445544443

>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A

Probab=89.07  E-value=4.4  Score=32.09  Aligned_cols=104  Identities=12%  Similarity=0.026  Sum_probs=65.0

Q ss_pred             CCCCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCC
Q 017567           71 KTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEK  150 (369)
Q Consensus        71 ~~~~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~  150 (369)
                      +....+.+|.|+...-.+-...-+.+++..+.|.|..   -.|.+.+.+.+++.+|+.+.+.-.-         .     
T Consensus        15 ~~~~~m~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~---~~~~~~al~~l~~~~~dlii~D~~l---------~-----   77 (150)
T 4e7p_A           15 VPRGSHMKVLVAEDQSMLRDAMCQLLTLQPDVESVLQ---AKNGQEAIQLLEKESVDIAILDVEM---------P-----   77 (150)
T ss_dssp             -----CEEEEEECSCHHHHHHHHHHHHTSTTEEEEEE---ESSHHHHHHHHTTSCCSEEEECSSC---------S-----
T ss_pred             CCCCCccEEEEEcCCHHHHHHHHHHHHhCCCcEEEEE---ECCHHHHHHHhhccCCCEEEEeCCC---------C-----
Confidence            3335678999999999998888888888765555543   3577888889999999988874210         0     


Q ss_pred             ceEEecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCc
Q 017567          151 PEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (369)
Q Consensus       151 ~~v~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~  194 (369)
                        -..|.+-+.++-+. ..++-+..+++.....-...+++.|-.
T Consensus        78 --~~~g~~~~~~l~~~-~~~~~ii~ls~~~~~~~~~~~~~~g~~  118 (150)
T 4e7p_A           78 --VKTGLEVLEWIRSE-KLETKVVVVTTFKRAGYFERAVKAGVD  118 (150)
T ss_dssp             --SSCHHHHHHHHHHT-TCSCEEEEEESCCCHHHHHHHHHTTCS
T ss_pred             --CCcHHHHHHHHHHh-CCCCeEEEEeCCCCHHHHHHHHHCCCc
Confidence              01122333333332 345555566666666666777777744

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=89.07  E-value=0.33  Score=45.50  Aligned_cols=34  Identities=18%  Similarity=0.276  Sum_probs=28.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      +++|.|.|+||.||...++-+.+.. .++|+++.-
T Consensus        32 ~~~ilVtGatG~iG~~l~~~L~~~g-~~~V~~~~r   65 (377)
T 2q1s_A           32 NTNVMVVGGAGFVGSNLVKRLLELG-VNQVHVVDN   65 (377)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTT-CSEEEEECC
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcC-CceEEEEEC
Confidence            4689999999999999999988752 288998853

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=89.02  E-value=0.16  Score=45.21  Aligned_cols=33  Identities=15%  Similarity=0.186  Sum_probs=27.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      +|+|.|.|+||.||....+-+.+.  .++|+++.-
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r   34 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTL--AHEVRLSDI   34 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGT--EEEEEECCS
T ss_pred             CceEEEECCCCHHHHHHHHHHHhC--CCEEEEEeC
Confidence            468999999999999999887765  588888764

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=88.99  E-value=0.88  Score=43.03  Aligned_cols=92  Identities=10%  Similarity=0.078  Sum_probs=55.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .+|.|+|+ |.||..++.+.+..  .. +|++....  -+++ +.++++..+++.-.++.. +.+.              
T Consensus       193 ~~VlV~Ga-G~vG~~aiqlak~~--Ga~~Vi~~~~~--~~~~-~~a~~lGa~~vi~~~~~~-~~~~--------------  251 (373)
T 1p0f_A          193 STCAVFGL-GGVGFSAIVGCKAA--GASRIIGVGTH--KDKF-PKAIELGATECLNPKDYD-KPIY--------------  251 (373)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHH--TCSEEEEECSC--GGGH-HHHHHTTCSEEECGGGCS-SCHH--------------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHc--CCCeEEEECCC--HHHH-HHHHHcCCcEEEeccccc-chHH--------------
Confidence            58999996 99999999999976  45 67776532  2232 456778887765322100 0011              


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcC
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~g  192 (369)
                        +.+.++... .+|+|++++.+-..+.-.+.+++.|
T Consensus       252 --~~i~~~t~g-g~Dvvid~~g~~~~~~~~~~~l~~~  285 (373)
T 1p0f_A          252 --EVICEKTNG-GVDYAVECAGRIETMMNALQSTYCG  285 (373)
T ss_dssp             --HHHHHHTTS-CBSEEEECSCCHHHHHHHHHTBCTT
T ss_pred             --HHHHHHhCC-CCCEEEECCCCHHHHHHHHHHHhcC
Confidence              122333333 6999999875544455555555544

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=88.96  E-value=1.2  Score=40.04  Aligned_cols=65  Identities=9%  Similarity=0.075  Sum_probs=41.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH---hhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK---RFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~---~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      .|.+.|.|+||.||..+.+-+.+.  .++|+.+. .++.+.+.+...   +..++...+ .|-.+.+.+++.
T Consensus        25 ~k~vlITGas~gIG~~~a~~l~~~--G~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~   93 (269)
T 3gk3_A           25 KRVAFVTGGMGGLGAAISRRLHDA--GMAVAVSH-SERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERC   93 (269)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTT--TCEEEEEE-CSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEc-CCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHH
Confidence            467899999999999999988876  67776654 355555554443   334443333 454445455443

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=88.93  E-value=0.41  Score=43.60  Aligned_cols=33  Identities=21%  Similarity=0.280  Sum_probs=27.3

Q ss_pred             eEEEEecCChHhHHHHHHHHhC-CCc---eEEEEEee
Q 017567           78 PISVLGSTGSIGTQTLDIVAEH-EDK---FRVVALAA  110 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~-pd~---F~VvaLaa  110 (369)
                      +|.|.|+||+||....+-+.+. ...   ++|+++.-
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r   38 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDS   38 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEEC
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEEC
Confidence            6999999999999999888763 324   89999864

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=88.76  E-value=1.3  Score=39.67  Aligned_cols=44  Identities=20%  Similarity=0.201  Sum_probs=32.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~  123 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.  +|.+.+.+.+++
T Consensus        10 ~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~--r~~~~~~~~~~~   53 (267)
T 3t4x_A           10 GKTALVTGSTAGIGKAIATSLVAE--GANVLING--RREENVNETIKE   53 (267)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEE--SSHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHH
Confidence            368999999999999999988875  57777653  555555444443

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=88.72  E-value=3.9  Score=32.01  Aligned_cols=44  Identities=14%  Similarity=0.215  Sum_probs=31.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK  125 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~Fk  125 (369)
                      ++|+|+|+ |.+|......+.+.  .++|+.+.  +|-+.+.+..+++.
T Consensus         5 m~i~IiG~-G~iG~~~a~~L~~~--g~~v~~~d--~~~~~~~~~~~~~~   48 (140)
T 1lss_A            5 MYIIIAGI-GRVGYTLAKSLSEK--GHDIVLID--IDKDICKKASAEID   48 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhC--CCeEEEEE--CCHHHHHHHHHhcC
Confidence            47999997 99999999998876  46777654  45565544443443

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=88.63  E-value=2  Score=38.28  Aligned_cols=66  Identities=14%  Similarity=0.090  Sum_probs=39.8

Q ss_pred             CeeEEEEecC--ChHhHHHHHHHHhCCCceEEEEEeecCCH-HHHHHHHHhhCCCEEEEcCchhHHHHHHH
Q 017567           76 PKPISVLGST--GSIGTQTLDIVAEHEDKFRVVALAAGSNI-TLLADQVKRFKPQVVAVRNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGST--GSIGtqTLdVI~~~pd~F~VvaLaag~Nv-~lL~eQ~~~FkP~~V~v~de~~~~~l~~~  143 (369)
                      .|++.|.|+|  |.||..+.+-+.+.  .++|+.+.-.... +.+.+...++..-.+...|-.+.+.+++.
T Consensus         8 ~k~vlVTGas~~~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~   76 (261)
T 2wyu_A            8 GKKALVMGVTNQRSLGFAIAAKLKEA--GAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDAL   76 (261)
T ss_dssp             TCEEEEESCCSSSSHHHHHHHHHHHH--TCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHH
Confidence            3689999999  99999999988875  5778776432211 23333333333223334555555555543

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=88.55  E-value=0.97  Score=42.64  Aligned_cols=92  Identities=14%  Similarity=0.168  Sum_probs=54.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .+|.|.|+ |.||..++.+.+..  .. +|+++....  +++ +.++++..+.+.-..+.. +.+.              
T Consensus       192 ~~VlV~Ga-G~vG~~avqla~~~--Ga~~Vi~~~~~~--~~~-~~~~~lGa~~vi~~~~~~-~~~~--------------  250 (373)
T 2fzw_A          192 SVCAVFGL-GGVGLAVIMGCKVA--GASRIIGVDINK--DKF-ARAKEFGATECINPQDFS-KPIQ--------------  250 (373)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHH--TCSEEEEECSCG--GGH-HHHHHHTCSEEECGGGCS-SCHH--------------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHc--CCCeEEEEcCCH--HHH-HHHHHcCCceEecccccc-ccHH--------------
Confidence            58999996 99999999999976  45 677765322  222 345677777664322100 0011              


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcC
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~g  192 (369)
                        +.+.++... .+|+|++++.+...+.-.+.+++.|
T Consensus       251 --~~v~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~  284 (373)
T 2fzw_A          251 --EVLIEMTDG-GVDYSFECIGNVKVMRAALEACHKG  284 (373)
T ss_dssp             --HHHHHHTTS-CBSEEEECSCCHHHHHHHHHTBCTT
T ss_pred             --HHHHHHhCC-CCCEEEECCCcHHHHHHHHHhhccC
Confidence              122333333 6999999875544455555555544

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=88.49  E-value=0.34  Score=44.33  Aligned_cols=33  Identities=24%  Similarity=0.356  Sum_probs=27.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      .|+|.|.|+||+||....+-+.+.  .++|+++.-
T Consensus         5 ~~~vlVTGatGfIG~~l~~~L~~~--G~~V~~~~r   37 (337)
T 2c29_D            5 SETVCVTGASGFIGSWLVMRLLER--GYTVRATVR   37 (337)
T ss_dssp             -CEEEETTTTSHHHHHHHHHHHHT--TCEEEEEES
T ss_pred             CCEEEEECCchHHHHHHHHHHHHC--CCEEEEEEC
Confidence            468999999999999999888774  688988763

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=88.35  E-value=0.42  Score=42.47  Aligned_cols=32  Identities=13%  Similarity=0.248  Sum_probs=27.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      +++|.|.|+ |+||...++-+.+.  .++|++++-
T Consensus         5 ~~~ilVtGa-G~iG~~l~~~L~~~--g~~V~~~~r   36 (286)
T 3ius_A            5 TGTLLSFGH-GYTARVLSRALAPQ--GWRIIGTSR   36 (286)
T ss_dssp             CCEEEEETC-CHHHHHHHHHHGGG--TCEEEEEES
T ss_pred             cCcEEEECC-cHHHHHHHHHHHHC--CCEEEEEEc
Confidence            468999998 99999999999876  689999874

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=88.24  E-value=0.9  Score=40.17  Aligned_cols=46  Identities=11%  Similarity=0.012  Sum_probs=35.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee-cCCHHHHHHHHHhh
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA-GSNITLLADQVKRF  124 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa-g~Nv~lL~eQ~~~F  124 (369)
                      |++.|.|+||.||..+.+-+.+.  .++|+.+.. .+|.+.+.+...++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~~~~r~~~~~~~~~~~~   48 (244)
T 1zmo_A            2 VIALVTHARHFAGPAAVEALTQD--GYTVVCHDASFADAAERQRFESEN   48 (244)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHT--TCEEEECCGGGGSHHHHHHHHHHS
T ss_pred             CEEEEECCCChHHHHHHHHHHHC--CCEEEEecCCcCCHHHHHHHHHHh
Confidence            68999999999999999998876  577776422 16778777776666

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=88.18  E-value=1.3  Score=38.90  Aligned_cols=39  Identities=21%  Similarity=0.288  Sum_probs=29.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD  119 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~e  119 (369)
                      |++.|.|+||.||..+.+-+.+.  .++|+.+.  +|.+.+.+
T Consensus         3 k~vlVTGas~giG~~~a~~l~~~--G~~V~~~~--r~~~~~~~   41 (239)
T 2ekp_A            3 RKALVTGGSRGIGRAIAEALVAR--GYRVAIAS--RNPEEAAQ   41 (239)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SSCHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHH
Confidence            68999999999999999998875  57777654  34444433

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=88.05  E-value=0.35  Score=45.77  Aligned_cols=50  Identities=14%  Similarity=0.112  Sum_probs=36.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC-CHHHHHHHHHhhCCCEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS-NITLLADQVKRFKPQVV  129 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~-Nv~lL~eQ~~~FkP~~V  129 (369)
                      .++|.|.|+ |.||..++.+.+..  ..+|++..... +.+++ +.++++..+.+
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~-~~~~~~ga~~v  231 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTY--GLEVWMANRREPTEVEQ-TVIEETKTNYY  231 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHH--TCEEEEEESSCCCHHHH-HHHHHHTCEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhC--CCEEEEEeCCccchHHH-HHHHHhCCcee
Confidence            368999999 99999999999976  45888765432 12444 56677877665

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=87.92  E-value=1  Score=40.79  Aligned_cols=41  Identities=20%  Similarity=0.282  Sum_probs=31.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ  120 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ  120 (369)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|.+.+.+.
T Consensus        16 ~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~--r~~~~~~~~   56 (266)
T 3p19_A           16 KKLVVITGASSGIGEAIARRFSEE--GHPLLLLA--RRVERLKAL   56 (266)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHT--TCCEEEEE--SCHHHHHTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHh
Confidence            368999999999999999988876  56676643  566666543

>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1

Probab=87.73  E-value=0.82  Score=44.36  Aligned_cols=107  Identities=18%  Similarity=0.190  Sum_probs=66.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCC-CceEEEEEeecCCHHHHHHHHH--hhCCCE---EEEcCchhHHHHHHHHhcCCCC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHE-DKFRVVALAAGSNITLLADQVK--RFKPQV---VAVRNESLLDEIKEALANVEEK  150 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~p-d~F~VvaLaag~Nv~lL~eQ~~--~FkP~~---V~v~de~~~~~l~~~l~~~~~~  150 (369)
                      +||+|.|+ |-||...++.+.+|. ..|+|+++......+.+....+  .-.+++   |...+..        |.-.+..
T Consensus         1 ~kVgI~G~-G~iGr~llR~l~~~~~p~~eivain~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~--------l~v~g~~   71 (332)
T 1hdg_O            1 ARVAINGF-GRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENS--------LIVDGKE   71 (332)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSE--------EEETTEE
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhCCCCCeEEEEEEcCCChHHhhhhccCcCcCCCcCCcEEEcCCE--------EEECCeE
Confidence            37999999 999999999999882 3599999988777777776662  323332   2211110        0000111


Q ss_pred             ceEEecHHHHHHH-hcCCCCCEEEEeccCccCcHHHHHHHHcCC
Q 017567          151 PEILAGEQGVIEA-ARHPDAVTVVTGIVGCAGLKPTVAAIEAGK  193 (369)
Q Consensus       151 ~~v~~G~~gl~~~-~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK  193 (369)
                      +.++.- ....++ ....++|+|+.+.-.+...+-.-+.+++|.
T Consensus        72 i~v~~~-~dp~~l~w~~~~vDvV~~atg~~~s~e~a~~~l~aGa  114 (332)
T 1hdg_O           72 IKVFAE-PDPSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGA  114 (332)
T ss_dssp             EEEECC-SSGGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTC
T ss_pred             EEEEec-CChHHCcccccCCCEEEECCccchhHHHHHHHHHcCC
Confidence            223211 111111 011158999999888888877778889884

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=87.61  E-value=2.4  Score=33.33  Aligned_cols=37  Identities=22%  Similarity=0.313  Sum_probs=27.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLL  117 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL  117 (369)
                      +++|.|+|+ |.||....+.+.+..  ++|+.+.  +|-+.+
T Consensus         6 ~~~v~I~G~-G~iG~~~a~~l~~~g--~~v~~~d--~~~~~~   42 (144)
T 2hmt_A            6 NKQFAVIGL-GRFGGSIVKELHRMG--HEVLAVD--INEEKV   42 (144)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTT--CCCEEEE--SCHHHH
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCC--CEEEEEe--CCHHHH
Confidence            457999998 999999999998863  5666543  454544

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=87.61  E-value=3.3  Score=38.16  Aligned_cols=62  Identities=19%  Similarity=0.095  Sum_probs=43.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      |+|.|.|+++-||..+-.-+.+.  .++|+..  ..|-+.+.+..++. ++...+ .|-.+.+.+++.
T Consensus         3 K~vlVTGas~GIG~aia~~la~~--Ga~V~~~--~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~   65 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEA--GDKVCFI--DIDEKRSADFAKER-PNLFYFHGDVADPLTLKKF   65 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHTTC-TTEEEEECCTTSHHHHHHH
T ss_pred             CEEEEecCCCHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHhc-CCEEEEEecCCCHHHHHHH
Confidence            68999999999999999888876  6777654  46778887776664 454443 554555555543

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=87.59  E-value=0.82  Score=38.47  Aligned_cols=107  Identities=14%  Similarity=0.129  Sum_probs=60.7

Q ss_pred             CCCCCeeEEEEecC---ChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCC
Q 017567           72 TWDGPKPISVLGST---GSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVE  148 (369)
Q Consensus        72 ~~~~~kkI~ILGST---GSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~  148 (369)
                      .+..|++|+|+|+|   |++|...++-+.+.  .|+|....-..              +-+  ..               
T Consensus        10 ~l~~p~~IavIGaS~~~g~~G~~~~~~L~~~--G~~V~~vnp~~--------------~~i--~G---------------   56 (138)
T 1y81_A           10 NSKEFRKIALVGASKNPAKYGNIILKDLLSK--GFEVLPVNPNY--------------DEI--EG---------------   56 (138)
T ss_dssp             ----CCEEEEETCCSCTTSHHHHHHHHHHHT--TCEEEEECTTC--------------SEE--TT---------------
T ss_pred             cccCCCeEEEEeecCCCCCHHHHHHHHHHHC--CCEEEEeCCCC--------------CeE--CC---------------
Confidence            34568899999998   99999999988876  67766543211              000  00               


Q ss_pred             CCceEEecHHHHHHHhcCCCCCEEEEeccCccCcHHHH-HHHHcCCceeeecccceeecccchhHHhhhcCCeEe
Q 017567          149 EKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTV-AAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKIL  222 (369)
Q Consensus       149 ~~~~v~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~-~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~~~~Il  222 (369)
                        ..++   ..+.++.+  ++|+|+.++.. .-...++ ++++.|.+-.+-+-.+.   -.-+.+.|+++|.+++
T Consensus        57 --~~~~---~s~~el~~--~vDlvii~vp~-~~v~~v~~~~~~~g~~~i~~~~~~~---~~~l~~~a~~~Gi~~i  120 (138)
T 1y81_A           57 --LKCY---RSVRELPK--DVDVIVFVVPP-KVGLQVAKEAVEAGFKKLWFQPGAE---SEEIRRFLEKAGVEYS  120 (138)
T ss_dssp             --EECB---SSGGGSCT--TCCEEEECSCH-HHHHHHHHHHHHTTCCEEEECTTSC---CHHHHHHHHHHTCEEE
T ss_pred             --eeec---CCHHHhCC--CCCEEEEEeCH-HHHHHHHHHHHHcCCCEEEEcCccH---HHHHHHHHHHCCCEEE
Confidence              0111   01122222  48888888874 3333333 56677765444333221   2445667788887766

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=87.53  E-value=0.49  Score=40.98  Aligned_cols=35  Identities=23%  Similarity=0.328  Sum_probs=27.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      .|+|.|.|+||.||....+-+.+.....+|+++.-
T Consensus        18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r   52 (242)
T 2bka_A           18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGR   52 (242)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEES
T ss_pred             CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEc
Confidence            36899999999999999998887532118888753

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=87.44  E-value=3.2  Score=38.84  Aligned_cols=63  Identities=19%  Similarity=0.257  Sum_probs=48.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      |.+.|.|+++=||..+-.-+.+.  ..+|+..  .+|.+.|.+.++++..+...+ .|-.+.+.+++.
T Consensus        30 KvalVTGas~GIG~aiA~~la~~--Ga~V~i~--~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~   93 (273)
T 4fgs_A           30 KIAVITGATSGIGLAAAKRFVAE--GARVFIT--GRRKDVLDAAIAEIGGGAVGIQADSANLAELDRL   93 (273)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHH
T ss_pred             CEEEEeCcCCHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHH
Confidence            67899999999999999998876  6677643  478899999999998766654 555555555543

>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*

Probab=87.28  E-value=3.5  Score=37.37  Aligned_cols=130  Identities=18%  Similarity=0.203  Sum_probs=73.2

Q ss_pred             eeEEEEecC-ChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCch-----h-HHHHHHHHhcCCC
Q 017567           77 KPISVLGST-GSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNES-----L-LDEIKEALANVEE  149 (369)
Q Consensus        77 kkI~ILGST-GSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~-----~-~~~l~~~l~~~~~  149 (369)
                      +||+||+|. ||--...++-+++..-.++|+++..++.-....+.|+++.-.+..+...+     . -+++.+.|...+.
T Consensus         1 ~ri~vl~Sg~gsnl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~~~   80 (212)
T 1jkx_A            1 MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFDSREAYDRELIHEIDMYAP   80 (212)
T ss_dssp             CEEEEEESSCCHHHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECCGGGCSSHHHHHHHHHHHHGGGCC
T ss_pred             CEEEEEEECCcHHHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHcCCcEEEeCcccccchhhccHHHHHHHHhcCC
Confidence            479999886 45444445554444335899999887533445677888887666543211     1 1234444544444


Q ss_pred             CceEEecH-----HHHHHHhcCCCCCEEEE----eccCccCcHHHHHHHHcCCc-----eeeecccceeecccchhH
Q 017567          150 KPEILAGE-----QGVIEAARHPDAVTVVT----GIVGCAGLKPTVAAIEAGKD-----IALANKETLIAGGPFVLP  212 (369)
Q Consensus       150 ~~~v~~G~-----~gl~~~~~~~~~D~Vv~----AIvG~aGL~pt~~Ai~~gK~-----iaLANKEsLV~aG~li~~  212 (369)
                      +.-|++|-     +.+.+....    -++|    -+.-+-|..|...||.+|.+     +-..+.+  +=+|+++.+
T Consensus        81 Dliv~agy~~il~~~~l~~~~~----~~iNiHpSlLP~yrG~~pi~~ai~~G~~~tGvTvh~v~~~--~D~G~Ii~Q  151 (212)
T 1jkx_A           81 DVVVLAGFMRILSPAFVSHYAG----RLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDE--LDGGPVILQ  151 (212)
T ss_dssp             SEEEESSCCSCCCHHHHHHTTT----SEEEEESSCTTSCCSSCHHHHHHHTTCSEEEEEEEECCSS--TTCSCEEEE
T ss_pred             CEEEEeChhhhCCHHHHhhccC----CEEEEccCcccCCCCccHHHHHHHcCCCceEEEEEEEccc--ccCCCEEEE
Confidence            44455553     334433322    2232    23557889999999999843     3334432  345666643

>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}

Probab=87.17  E-value=0.68  Score=39.16  Aligned_cols=107  Identities=9%  Similarity=0.117  Sum_probs=61.0

Q ss_pred             CCeeEEEEecC---ChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCc
Q 017567           75 GPKPISVLGST---GSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKP  151 (369)
Q Consensus        75 ~~kkI~ILGST---GSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~  151 (369)
                      .|++|+|+|++   |++|...++-+.+.  .|+|....-..-.+              .+..                 .
T Consensus        12 ~p~~IavIGas~~~g~~G~~~~~~L~~~--G~~v~~vnp~~~g~--------------~i~G-----------------~   58 (145)
T 2duw_A           12 STRTIALVGASDKPDRPSYRVMKYLLDQ--GYHVIPVSPKVAGK--------------TLLG-----------------Q   58 (145)
T ss_dssp             HCCCEEEESCCSCTTSHHHHHHHHHHHH--TCCEEEECSSSTTS--------------EETT-----------------E
T ss_pred             CCCEEEEECcCCCCCChHHHHHHHHHHC--CCEEEEeCCccccc--------------ccCC-----------------e
Confidence            37899999998   89999988888765  46655532211000              0000                 1


Q ss_pred             eEEecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeecccchhHHhhhcCCeEe
Q 017567          152 EILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKIL  222 (369)
Q Consensus       152 ~v~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~~~~Il  222 (369)
                      .++   ..+.++.+  ++|+|+.++..-+-..-..++++.|.+-.+-+.-++   =.-+.+.|+++|.+++
T Consensus        59 ~~~---~sl~el~~--~~Dlvii~vp~~~v~~v~~~~~~~g~~~i~i~~~~~---~~~l~~~a~~~Gi~~i  121 (145)
T 2duw_A           59 QGY---ATLADVPE--KVDMVDVFRNSEAAWGVAQEAIAIGAKTLWLQLGVI---NEQAAVLAREAGLSVV  121 (145)
T ss_dssp             ECC---SSTTTCSS--CCSEEECCSCSTHHHHHHHHHHHHTCCEEECCTTCC---CHHHHHHHHTTTCEEE
T ss_pred             ecc---CCHHHcCC--CCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCChH---HHHHHHHHHHcCCEEE
Confidence            111   11222222  589999988854434444457778854444443222   2335567788898888

>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0

Probab=87.07  E-value=6.2  Score=36.06  Aligned_cols=131  Identities=15%  Similarity=0.235  Sum_probs=74.4

Q ss_pred             CCeeEEEEecC-ChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCc-----hh-HHHHHHHHhcC
Q 017567           75 GPKPISVLGST-GSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNE-----SL-LDEIKEALANV  147 (369)
Q Consensus        75 ~~kkI~ILGST-GSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de-----~~-~~~l~~~l~~~  147 (369)
                      .++||+||.|. ||--+..++-+++. -.++|+++..++--..-.+.++++.-....+...     .. -+++.+.|...
T Consensus         4 ~~~riavl~SG~Gsnl~all~~~~~~-~~~eI~~Vis~~~~a~~~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~   82 (215)
T 3tqr_A            4 EPLPIVVLISGNGTNLQAIIGAIQKG-LAIEIRAVISNRADAYGLKRAQQADIPTHIIPHEEFPSRTDFESTLQKTIDHY   82 (215)
T ss_dssp             CCEEEEEEESSCCHHHHHHHHHHHTT-CSEEEEEEEESCTTCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHTT
T ss_pred             CCcEEEEEEeCCcHHHHHHHHHHHcC-CCCEEEEEEeCCcchHHHHHHHHcCCCEEEeCccccCchhHhHHHHHHHHHhc
Confidence            36789999763 55555555555443 4699999988642222246788888766665321     11 12344445444


Q ss_pred             CCCceEEecH-----HHHHHHhcCCCCCEEEEe----ccCccCcHHHHHHHHcCCc-----eeeecccceeecccchhH
Q 017567          148 EEKPEILAGE-----QGVIEAARHPDAVTVVTG----IVGCAGLKPTVAAIEAGKD-----IALANKETLIAGGPFVLP  212 (369)
Q Consensus       148 ~~~~~v~~G~-----~gl~~~~~~~~~D~Vv~A----IvG~aGL~pt~~Ai~~gK~-----iaLANKEsLV~aG~li~~  212 (369)
                      +.+.-|++|-     +.+.+....    -++|-    +..+-|..|...|+.+|.+     +-..+.+  +=.|+++.+
T Consensus        83 ~~Dliv~agy~~il~~~~l~~~~~----~~iNiHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~--~D~G~Ii~Q  155 (215)
T 3tqr_A           83 DPKLIVLAGFMRKLGKAFVSHYSG----RMINIHPSLLPKYTGLNTHERALAAGETEHGVSVHYVTED--LDAGPLICQ  155 (215)
T ss_dssp             CCSEEEESSCCSCCCHHHHHHTTT----SEEEEESSSTTTTCSSCHHHHHHHTTCSEEEEEEEECC-C--TTCSCEEEE
T ss_pred             CCCEEEEccchhhCCHHHHhhccC----CeEEeCcccCCCCCChhHHHHHHHcCCCeEEEEEEEEcCC--CCCCCEEEE
Confidence            4444455553     233333321    12332    3557899999999999843     4444544  556777744

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=86.94  E-value=0.46  Score=43.91  Aligned_cols=34  Identities=18%  Similarity=0.304  Sum_probs=27.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (369)
                      |+|.|.|+||+||...++-+.+.. .++|+++.-.
T Consensus        47 ~~vlVtGatG~iG~~l~~~L~~~g-~~~V~~~~r~   80 (357)
T 2x6t_A           47 RMIIVTGGAGFIGSNIVKALNDKG-ITDILVVDNL   80 (357)
T ss_dssp             -CEEEETTTSHHHHHHHHHHHHTT-CCCEEEEECC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCC-CcEEEEEecC
Confidence            679999999999999999888752 2788887643

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=86.84  E-value=1.7  Score=40.71  Aligned_cols=31  Identities=26%  Similarity=0.239  Sum_probs=26.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVAL  108 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaL  108 (369)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+
T Consensus         9 gk~~lVTGas~GIG~~~a~~La~~--Ga~Vv~~   39 (319)
T 1gz6_A            9 GRVVLVTGAGGGLGRAYALAFAER--GALVVVN   39 (319)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEE
Confidence            368999999999999999998876  5778775

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=86.83  E-value=1.8  Score=38.48  Aligned_cols=60  Identities=12%  Similarity=0.064  Sum_probs=37.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKE  142 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~  142 (369)
                      .|.+.|.|+||.||..+..-+.+.  .++|+.+.-  +.+.+.+   ++..+...+ .|-.+.+.++.
T Consensus         9 ~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r--~~~~~~~---~~~~~~~~~~~D~~~~~~v~~   69 (257)
T 3tl3_A            9 DAVAVVTGGASGLGLATTKRLLDA--GAQVVVLDI--RGEDVVA---DLGDRARFAAADVTDEAAVAS   69 (257)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHH--TCEEEEEES--SCHHHHH---HTCTTEEEEECCTTCHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeC--chHHHHH---hcCCceEEEECCCCCHHHHHH
Confidence            368999999999999999888876  577777643  3333332   334444333 44444444444

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=86.82  E-value=2.7  Score=42.46  Aligned_cols=82  Identities=16%  Similarity=0.227  Sum_probs=48.8

Q ss_pred             CCCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC-----CHHHHHHHHHhhCCCEEEE-cCchhHHHHHHHHh
Q 017567           72 TWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS-----NITLLADQVKRFKPQVVAV-RNESLLDEIKEALA  145 (369)
Q Consensus        72 ~~~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~-----Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~l~  145 (369)
                      .|...+++.|.|+||.||....+-+.++  .++.+.+...+     ..+.+.+..+....+...+ .|-.+.+.+++.  
T Consensus       255 ~~~~~~~vLITGgtGgIG~~lA~~La~~--G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~--  330 (511)
T 2z5l_A          255 SWQPSGTVLITGGMGAIGRRLARRLAAE--GAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAAL--  330 (511)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHT--TCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHH--
T ss_pred             CcCCCCEEEEECCCCHHHHHHHHHHHhC--CCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHH--
Confidence            3566689999999999999999888765  45333333332     2344544455444433332 343433334333  


Q ss_pred             cCCCCceEEecHHHHHHHhcCCCCCEEEEe
Q 017567          146 NVEEKPEILAGEQGVIEAARHPDAVTVVTG  175 (369)
Q Consensus       146 ~~~~~~~v~~G~~gl~~~~~~~~~D~Vv~A  175 (369)
                                        .+....|.||+.
T Consensus       331 ------------------~~~~~ld~VVh~  342 (511)
T 2z5l_A          331 ------------------VTAYPPNAVFHT  342 (511)
T ss_dssp             ------------------HHHSCCSEEEEC
T ss_pred             ------------------HhcCCCcEEEEC
Confidence                              222468999886

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=86.78  E-value=1.4  Score=40.54  Aligned_cols=45  Identities=22%  Similarity=0.326  Sum_probs=33.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      .|++.|+|++|.||..+...+.+.  ..+|+. + +++.+++.+.++++
T Consensus       119 gk~vlVtGaaGGiG~aia~~L~~~--G~~V~i-~-~R~~~~~~~l~~~~  163 (287)
T 1lu9_A          119 GKKAVVLAGTGPVGMRSAALLAGE--GAEVVL-C-GRKLDKAQAAADSV  163 (287)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHT--TCEEEE-E-ESSHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--cCEEEE-E-ECCHHHHHHHHHHH
Confidence            368999999999999999999886  456443 3 45666666555544

>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}

Probab=86.76  E-value=4.9  Score=35.65  Aligned_cols=35  Identities=17%  Similarity=0.185  Sum_probs=24.9

Q ss_pred             ceeecccchhHHhhhcCCeEeecccchhhHHHhhc
Q 017567          202 TLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ  236 (369)
Q Consensus       202 sLV~aG~li~~~a~k~~~~IlPVDSEHsAIfQ~L~  236 (369)
                      .+|.||-+..++|+++|.+-+.+.|...+|.|.|+
T Consensus       144 ~vvVG~~~~~~~A~~~Gl~~vli~sg~eSI~~Ai~  178 (196)
T 2q5c_A          144 KIVVSGKTVTDEAIKQGLYGETINSGEESLRRAIE  178 (196)
T ss_dssp             CEEEECHHHHHHHHHTTCEEEECCCCHHHHHHHHH
T ss_pred             eEEECCHHHHHHHHHcCCcEEEEecCHHHHHHHHH
Confidence            45667777777777777777777777777777664

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=86.74  E-value=2.2  Score=42.69  Aligned_cols=70  Identities=17%  Similarity=0.294  Sum_probs=42.9

Q ss_pred             CCCCCeeEEEEecCChHhHHHHHHHHhCCCceE-EEEEeecC-----CHHHHHHHHHhhCCCEEEE-cCchhHHHHHHHH
Q 017567           72 TWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFR-VVALAAGS-----NITLLADQVKRFKPQVVAV-RNESLLDEIKEAL  144 (369)
Q Consensus        72 ~~~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~-VvaLaag~-----Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~l  144 (369)
                      .|...+++.|.|+||.||....+-+.+.  .++ |+.+ ..+     ..+.+.+..+....+...+ .|-.+.+.+++.+
T Consensus       222 ~~~~~~~vLITGgtGgIG~~la~~La~~--G~~~vvl~-~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~  298 (486)
T 2fr1_A          222 EWKPTGTVLVTGGTGGVGGQIARWLARR--GAPHLLLV-SRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELL  298 (486)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHH--TCSEEEEE-ESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CcCCCCEEEEECCCCHHHHHHHHHHHHc--CCCEEEEE-cCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHH
Confidence            4566689999999999999999888775  443 5444 332     2345555555554443332 4544455555443

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=86.74  E-value=0.44  Score=50.89  Aligned_cols=94  Identities=14%  Similarity=0.190  Sum_probs=57.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      .+|.|.|++|.||..++.+.+..  ..+|++.+...+.+.+     ++..+++.-.....+                   
T Consensus       347 ~~VLI~gaaGgvG~~aiqlAk~~--Ga~V~~t~~~~k~~~l-----~lga~~v~~~~~~~~-------------------  400 (795)
T 3slk_A          347 ESLLVHSAAGGVGMAAIQLARHL--GAEVYATASEDKWQAV-----ELSREHLASSRTCDF-------------------  400 (795)
T ss_dssp             CCEEEESTTBHHHHHHHHHHHHT--TCCEEEECCGGGGGGS-----CSCGGGEECSSSSTH-------------------
T ss_pred             CEEEEecCCCHHHHHHHHHHHHc--CCEEEEEeChHHhhhh-----hcChhheeecCChhH-------------------
Confidence            58999999999999999999987  4578886643322221     255555543222211                   


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceee
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIAL  197 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaL  197 (369)
                      .+.+.++..-..+|+|++++.| ..+.-.+.+++.|=++.+
T Consensus       401 ~~~i~~~t~g~GvDvVld~~gg-~~~~~~l~~l~~~Gr~v~  440 (795)
T 3slk_A          401 EQQFLGATGGRGVDVVLNSLAG-EFADASLRMLPRGGRFLE  440 (795)
T ss_dssp             HHHHHHHSCSSCCSEEEECCCT-TTTHHHHTSCTTCEEEEE
T ss_pred             HHHHHHHcCCCCeEEEEECCCc-HHHHHHHHHhcCCCEEEE
Confidence            1122233333358888888765 556667777766655444

>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}

Probab=86.71  E-value=5  Score=36.69  Aligned_cols=129  Identities=20%  Similarity=0.249  Sum_probs=74.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhC---CCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCch-----h-HHHHHHHHhc
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEH---EDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNES-----L-LDEIKEALAN  146 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~---pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~-----~-~~~l~~~l~~  146 (369)
                      |+||+||.|.+  |++.-.++.+.   .-..+|+++..++--....+.|+++.-....+...+     . -+++.+.|..
T Consensus         2 m~riavl~Sg~--Gsnl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~   79 (211)
T 3p9x_A            2 MKRVAIFASGS--GTNAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVHEIPVCALDPKTYPSKEAYEIEVVQQLKE   79 (211)
T ss_dssp             -CEEEEECCTT--CHHHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHTTTCCEEECCGGGSSSHHHHHHHHHHHHHH
T ss_pred             CCEEEEEEeCC--chHHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHHcCCCEEEeChhhcCchhhhHHHHHHHHHh
Confidence            67999998865  77777776543   234799999886533345677888887666553221     1 1233344443


Q ss_pred             CCCCceEEecH-----HHHHHHhcCCCCCEEEEe----ccCccCcHHHHHHHHcCCc-----eeeecccceeecccchhH
Q 017567          147 VEEKPEILAGE-----QGVIEAARHPDAVTVVTG----IVGCAGLKPTVAAIEAGKD-----IALANKETLIAGGPFVLP  212 (369)
Q Consensus       147 ~~~~~~v~~G~-----~gl~~~~~~~~~D~Vv~A----IvG~aGL~pt~~Ai~~gK~-----iaLANKEsLV~aG~li~~  212 (369)
                      .+.+.-|++|-     +.+.+....    -++|-    +..+-|..|...|+.+|.+     +-..+.+  +=.|+++.+
T Consensus        80 ~~~Dliv~agy~~Il~~~~l~~~~~----~~iNiHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~--~D~G~Ii~Q  153 (211)
T 3p9x_A           80 KQIDFVVLAGYMRLVGPTLLGAYEG----RIVNIHPSLLPAFPGLHAIEQAIRANVKVTGVTIHYVDEG--MDTGPIIAQ  153 (211)
T ss_dssp             TTCCEEEESSCCSCCCHHHHHHHTT----SEEEEESSCTTSSCSSCHHHHHHHTTCSEEEEEEEECCSS--SSCSCEEEE
T ss_pred             cCCCEEEEeCchhhcCHHHHhhccC----CeEEECCccCCCCCCccHHHHHHHcCCCeEEEEEEEEcCC--CCCCCEEEE
Confidence            33444454443     234443332    12332    3566799999999999853     4444533  456777744

>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}

Probab=86.68  E-value=2.4  Score=40.08  Aligned_cols=106  Identities=22%  Similarity=0.243  Sum_probs=63.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee-cCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA-GSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa-g~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      ..+++|.|+||..|+..++-+.++  .|++++-.- ++.-+       +       +.                 +..++
T Consensus        13 ~~~vvV~Gasg~~G~~~~~~l~~~--g~~~v~~VnP~~~g~-------~-------i~-----------------G~~vy   59 (297)
T 2yv2_A           13 ETRVLVQGITGREGSFHAKAMLEY--GTKVVAGVTPGKGGS-------E-------VH-----------------GVPVY   59 (297)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHH--TCEEEEEECTTCTTC-------E-------ET-----------------TEEEE
T ss_pred             CCEEEEECCCCCHHHHHHHHHHhC--CCcEEEEeCCCCCCc-------e-------EC-----------------CEeee
Confidence            446888899999999998888876  577554321 11000       0       00                 11222


Q ss_pred             ecHHHHHHHhcC-CCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeecc------cchhHHhhhcCCeEe
Q 017567          155 AGEQGVIEAARH-PDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG------PFVLPLAHKHNIKIL  222 (369)
Q Consensus       155 ~G~~gl~~~~~~-~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~aG------~li~~~a~k~~~~Il  222 (369)
                      .   .+.++.+. .++|+++..+....-..-..+|+++|.+.++     ++..|      .-+.+.|++++..++
T Consensus        60 ~---sl~el~~~~~~~DvaIi~vp~~~~~~~v~ea~~~Gi~~vV-----i~t~G~~~~~~~~l~~~A~~~gi~vi  126 (297)
T 2yv2_A           60 D---SVKEALAEHPEINTSIVFVPAPFAPDAVYEAVDAGIRLVV-----VITEGIPVHDTMRFVNYARQKGATII  126 (297)
T ss_dssp             S---SHHHHHHHCTTCCEEEECCCGGGHHHHHHHHHHTTCSEEE-----ECCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred             C---CHHHHhhcCCCCCEEEEecCHHHHHHHHHHHHHCCCCEEE-----EECCCCCHHHHHHHHHHHHHcCCEEE
Confidence            1   12333322 2378888888888888888888888877322     12222      245667778887766

>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*

Probab=86.63  E-value=0.29  Score=46.20  Aligned_cols=125  Identities=12%  Similarity=0.225  Sum_probs=75.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      ..||++.| ||.||+..++-   +  .|+++++..    ++    +.++.+  .++.                       
T Consensus        12 ~~rV~i~G-~GaIG~~v~~~---~--~leLv~v~~----~k----~gelgv--~a~~-----------------------   52 (253)
T 1j5p_A           12 HMTVLIIG-MGNIGKKLVEL---G--NFEKIYAYD----RI----SKDIPG--VVRL-----------------------   52 (253)
T ss_dssp             CCEEEEEC-CSHHHHHHHHH---S--CCSEEEEEC----SS----CCCCSS--SEEC-----------------------
T ss_pred             cceEEEEC-cCHHHHHHHhc---C--CcEEEEEEe----cc----ccccCc--eeeC-----------------------
Confidence            35788887 89999997776   3  899999876    22    112211  1111                       


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHH-HHHHHHcCCceeeecccceeecc--cchhHHhhhcCCeEe-ecccchhhH
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKP-TVAAIEAGKDIALANKETLIAGG--PFVLPLAHKHNIKIL-PADSEHSAI  231 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~p-t~~Ai~~gK~iaLANKEsLV~aG--~li~~~a~k~~~~Il-PVDSEHsAI  231 (369)
                         .+.++.+  ++|.||-+- +...+.. ...+|++|+++....=..|.-..  .-|.++|+++|.+|+ |-=    ||
T Consensus        53 ---d~d~lla--~pD~VVe~A-~~~av~e~~~~iL~aG~dvv~~S~gaLad~~l~~~L~~aA~~gg~~l~vpSG----Ai  122 (253)
T 1j5p_A           53 ---DEFQVPS--DVSTVVECA-SPEAVKEYSLQILKNPVNYIIISTSAFADEVFRERFFSELKNSPARVFFPSG----AI  122 (253)
T ss_dssp             ---SSCCCCT--TCCEEEECS-CHHHHHHHHHHHTTSSSEEEECCGGGGGSHHHHHHHHHHHHTCSCEEECCCT----TC
T ss_pred             ---CHHHHhh--CCCEEEECC-CHHHHHHHHHHHHHCCCCEEEcChhhhcCHHHHHHHHHHHHHCCCeEEecCC----cc
Confidence               1123332  689999885 5556666 77888899988654411111000  345667889999984 421    33


Q ss_pred             H--HhhcCCCCCccceEEEee
Q 017567          232 F--QCIQGLPEGALRRIILTA  250 (369)
Q Consensus       232 f--Q~L~g~~~~~v~kiiLTA  250 (369)
                      .  +.|.--. ..|++|.+|.
T Consensus       123 ~GlD~l~aa~-g~l~~V~~~t  142 (253)
T 1j5p_A          123 GGLDVLSSIK-DFVKNVRIET  142 (253)
T ss_dssp             CCHHHHHHHG-GGEEEEEEEE
T ss_pred             cchhHHHHhc-CCccEEEEEE
Confidence            2  3333222 5799999994

>1jfl_A Aspartate racemase; alpha-beta structure, HOMO-dimer, homologous domains, isomer; 1.90A {Pyrococcus horikoshii} SCOP: c.78.2.1 c.78.2.1 PDB: 2dx7_A* 1iu9_A

Probab=86.56  E-value=3.9  Score=36.39  Aligned_cols=21  Identities=29%  Similarity=0.461  Sum_probs=18.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAE   98 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~   98 (369)
                      ||+|+|+|..|  +.+|+++.++
T Consensus         1 m~~iGiiGGmg--~~at~~~~~~   21 (228)
T 1jfl_A            1 MKTIGILGGMG--PLATAELFRR   21 (228)
T ss_dssp             CCCEEEEECSS--HHHHHHHHHH
T ss_pred             CCeEEEecccC--HHHHHHHHHH
Confidence            57899999999  8899998886

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=86.46  E-value=0.6  Score=41.73  Aligned_cols=32  Identities=19%  Similarity=0.296  Sum_probs=27.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      +++|.|.| ||+||...++-+.+.  .++|++++-
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~--g~~V~~~~r   34 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQ--GHEVTGLRR   34 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHT--TCCEEEEEC
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHC--CCEEEEEeC
Confidence            46899999 699999999998876  578998864

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=86.46  E-value=2.4  Score=37.94  Aligned_cols=65  Identities=15%  Similarity=0.130  Sum_probs=40.7

Q ss_pred             CeeEEEEec--CChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEE-EEcCchhHHHHHHH
Q 017567           76 PKPISVLGS--TGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVV-AVRNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGS--TGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V-~v~de~~~~~l~~~  143 (369)
                      .|++.|.|+  ||.||..+..-+.+.  .++|+.+. .+.-+.+.+..+++..+.. ...|-.+.+.+++.
T Consensus         7 ~k~vlVTGa~~s~gIG~aia~~l~~~--G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   74 (269)
T 2h7i_A            7 GKRILVSGIITDSSIAFHIARVAQEQ--GAQLVLTG-FDRLRLIQRITDRLPAKAPLLELDVQNEEHLASL   74 (269)
T ss_dssp             TCEEEECCCSSTTSHHHHHHHHHHHT--TCEEEEEE-CSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCCCCchHHHHHHHHHHC--CCEEEEEe-cChHHHHHHHHHhcCCCceEEEccCCCHHHHHHH
Confidence            368999999  999999999988876  57777653 3333334555555543322 23454444444443

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=86.46  E-value=3.1  Score=42.10  Aligned_cols=66  Identities=18%  Similarity=0.245  Sum_probs=43.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC-----CHHHHHHHHHhhCCCEEEE-cCchhHHHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS-----NITLLADQVKRFKPQVVAV-RNESLLDEIKEAL  144 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~-----Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~l  144 (369)
                      +++.|.|+||.||....+-+.++  ..+.+.|..++     ..+.+.+.+++...+...+ .|-.+.+.+++.+
T Consensus       240 ~~vLITGgsgGIG~alA~~La~~--Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~  311 (496)
T 3mje_A          240 GSVLVTGGTGGIGGRVARRLAEQ--GAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALL  311 (496)
T ss_dssp             SEEEEETCSSHHHHHHHHHHHHT--TCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CEEEEECCCCchHHHHHHHHHHC--CCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence            78999999999999999888775  45344455443     3556666666666655443 4545555555544

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=86.42  E-value=5.2  Score=34.73  Aligned_cols=59  Identities=14%  Similarity=0.227  Sum_probs=38.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIK  141 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~  141 (369)
                      ++|+|+|+ |.+|.+..+.+.+.  .++|+.+.  +|-+.+.+..+++.. .+...|....+.|+
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~--g~~v~vid--~~~~~~~~l~~~~~~-~~i~gd~~~~~~l~   59 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSR--KYGVVIIN--KDRELCEEFAKKLKA-TIIHGDGSHKEILR   59 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHT--TCCEEEEE--SCHHHHHHHHHHSSS-EEEESCTTSHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhC--CCeEEEEE--CCHHHHHHHHHHcCC-eEEEcCCCCHHHHH
Confidence            36999996 99999999999876  45566554  677776665555443 34445544433333

>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0

Probab=86.32  E-value=2.7  Score=38.46  Aligned_cols=131  Identities=15%  Similarity=0.206  Sum_probs=74.8

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCC---ceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCch-hHHHHHHHHhcCCC
Q 017567           74 DGPKPISVLGSTGSIGTQTLDIVAEHED---KFRVVALAAGSNITLLADQVKRFKPQVVAVRNES-LLDEIKEALANVEE  149 (369)
Q Consensus        74 ~~~kkI~ILGSTGSIGtqTLdVI~~~pd---~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~-~~~~l~~~l~~~~~  149 (369)
                      ..++||+||-|-.  |++..+++.+..+   .++|+++..++--..-.+.|+++.-.+..+.... .-+++.+.|...+.
T Consensus         6 ~~~~ri~vl~SG~--gsnl~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~gIp~~~~~~~~~~~~~~~~~L~~~~~   83 (215)
T 3kcq_A            6 KKELRVGVLISGR--GSNLEALAKAFSTEESSVVISCVISNNAEARGLLIAQSYGIPTFVVKRKPLDIEHISTVLREHDV   83 (215)
T ss_dssp             -CCEEEEEEESSC--CHHHHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHTTCCEEECCBTTBCHHHHHHHHHHTTC
T ss_pred             CCCCEEEEEEECC--cHHHHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHcCCCEEEeCcccCChHHHHHHHHHhCC
Confidence            4467999987743  5555555554432   4899999886422222466888876666543211 01334444443344


Q ss_pred             CceEEecH-----HHHHHHhcCCCCCEEEEe----ccCccCcHHHHHHHHcCC-----ceeeecccceeecccchhH
Q 017567          150 KPEILAGE-----QGVIEAARHPDAVTVVTG----IVGCAGLKPTVAAIEAGK-----DIALANKETLIAGGPFVLP  212 (369)
Q Consensus       150 ~~~v~~G~-----~gl~~~~~~~~~D~Vv~A----IvG~aGL~pt~~Ai~~gK-----~iaLANKEsLV~aG~li~~  212 (369)
                      +.-|++|-     +.+.+....    -++|-    +..+-|..|...|+.+|-     ++-..+.+  +=.|+++.+
T Consensus        84 Dlivlagy~~IL~~~~l~~~~~----~~iNiHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~--lD~G~Ii~Q  154 (215)
T 3kcq_A           84 DLVCLAGFMSILPEKFVTDWHH----KIINIHPSLLPSFKGLNAQEQAYKAGVKIAGCTLHYVYQE--LDAGPIIMQ  154 (215)
T ss_dssp             SEEEESSCCSCCCHHHHHHTTT----SEEEEESSCTTTTCSSCHHHHHHHHTCSEEEEEEEECCSS--TTCSCEEEE
T ss_pred             CEEEEeCCceEeCHHHHhhccC----CeEEECcccccCCCCccHHHHHHHcCCCeEEEEEEEEcCC--CCCCCEEEE
Confidence            44555554     334443321    23332    456789999999999984     34455554  567888754

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=86.26  E-value=0.66  Score=42.34  Aligned_cols=35  Identities=11%  Similarity=0.279  Sum_probs=27.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCC-----ceEEEEEee
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHED-----KFRVVALAA  110 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd-----~F~VvaLaa  110 (369)
                      .++|.|.|+||+||....+-+.+...     .++|+++.-
T Consensus        14 ~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r   53 (342)
T 2hrz_A           14 GMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDV   53 (342)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEES
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEc
Confidence            46899999999999999988877521     178888763

>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A

Probab=86.19  E-value=1.5  Score=43.56  Aligned_cols=108  Identities=16%  Similarity=0.145  Sum_probs=64.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCC-CceEEEEEeecCCHHHHHHHHHhh--CC---CEEEEcCchhHHHHHHHHhcCCCC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHE-DKFRVVALAAGSNITLLADQVKRF--KP---QVVAVRNESLLDEIKEALANVEEK  150 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~p-d~F~VvaLaag~Nv~lL~eQ~~~F--kP---~~V~v~de~~~~~l~~~l~~~~~~  150 (369)
                      .||+|.|. |-||+..++.+.++. ..|+|+++.-..+.+.++...+--  ..   .-|...+..        |.-.+..
T Consensus         3 ikVgInGf-GrIGr~vlR~l~~~~~~~veIVaInd~~d~~~~a~ll~yds~~G~~~~~v~~~~~~--------l~v~g~~   73 (380)
T 2d2i_A            3 IRVAINGF-GRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENS--------ITVNGKT   73 (380)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHCSSCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTE--------EEETTEE
T ss_pred             cEEEEECc-CHHHHHHHHHHhcCCCCCEEEEEEecCCCHHHHHHhhcccccCCCCCCcEEEeCCe--------EEECCeE
Confidence            58999999 999999999998873 469999998766777776655421  11   111111100        0000011


Q ss_pred             ceEEecHHHHHHHh-cCCCCCEEEEeccCccCcHHHHHHHHcCCc
Q 017567          151 PEILAGEQGVIEAA-RHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (369)
Q Consensus       151 ~~v~~G~~gl~~~~-~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~  194 (369)
                      +.++.- ....++. ...++|+|+.+.-.+...+-.-+.+++|.+
T Consensus        74 i~v~~~-~dp~~l~w~~~gvDvV~e~TG~f~s~e~a~~hl~aGak  117 (380)
T 2d2i_A           74 MKIVCD-RNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAK  117 (380)
T ss_dssp             EEEECC-SCGGGCCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCS
T ss_pred             EEEEec-CChHHCCcccCCCCEEEECCCccccHHHHHHHHHcCCc
Confidence            222211 1111110 011689999998878877777788999944

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=86.13  E-value=3.2  Score=36.71  Aligned_cols=33  Identities=24%  Similarity=0.216  Sum_probs=27.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      .|++.|.|+||.||..+..-+.+.  .++|+++.-
T Consensus         7 ~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r   39 (250)
T 2fwm_X            7 GKNVWVTGAGKGIGYATALAFVEA--GAKVTGFDQ   39 (250)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEES
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeC
Confidence            368999999999999999988875  578887653

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=86.09  E-value=7.2  Score=38.66  Aligned_cols=53  Identities=19%  Similarity=0.221  Sum_probs=42.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVA  130 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~  130 (369)
                      .|.+.|.|+||-||..+.+-+.+.  .++|+.+.-....+.+.+...+.+..++.
T Consensus       213 gk~~LVTGgsgGIG~aiA~~La~~--Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~  265 (454)
T 3u0b_A          213 GKVAVVTGAARGIGATIAEVFARD--GATVVAIDVDGAAEDLKRVADKVGGTALT  265 (454)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEECGGGHHHHHHHHHHHTCEEEE
T ss_pred             CCEEEEeCCchHHHHHHHHHHHHC--CCEEEEEeCCccHHHHHHHHHHcCCeEEE
Confidence            468999999999999999998876  67888776555677888888887765544

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=85.96  E-value=0.57  Score=41.79  Aligned_cols=34  Identities=18%  Similarity=0.279  Sum_probs=27.3

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS  112 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~  112 (369)
                      +|.|.|+||+||...++-+.+.. .++|+++.-..
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g-~~~V~~~~r~~   34 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKG-ITDILVVDNLK   34 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTT-CCCEEEEECCS
T ss_pred             CEEEEcCccHHHHHHHHHHHHCC-CcEEEEEccCC
Confidence            58999999999999999888752 27888876443

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=85.93  E-value=1.5  Score=41.06  Aligned_cols=81  Identities=9%  Similarity=0.006  Sum_probs=47.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee-cCCHHHHHHHHHhh------CCCEEE-EcCchhHHHHHHHHhcC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA-GSNITLLADQVKRF------KPQVVA-VRNESLLDEIKEALANV  147 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa-g~Nv~lL~eQ~~~F------kP~~V~-v~de~~~~~l~~~l~~~  147 (369)
                      .|+|.|.|+||.||..+..-+.+..  ++|+.+.. ..+.+.+.+++++.      ..+... ..|-.+.+.+++.+.. 
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G--~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-   78 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDP--SQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARER-   78 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCT--TCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHT-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCC--CceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHH-
Confidence            3689999999999999999988764  44444432 23444444444332      133333 3454555555544321 


Q ss_pred             CCCceEEecHHHHHHHhcCCCCCEEEEe
Q 017567          148 EEKPEILAGEQGVIEAARHPDAVTVVTG  175 (369)
Q Consensus       148 ~~~~~v~~G~~gl~~~~~~~~~D~Vv~A  175 (369)
                                     + ....+|++|+.
T Consensus        79 ---------------~-~~g~iD~lVnn   90 (327)
T 1jtv_A           79 ---------------V-TEGRVDVLVCN   90 (327)
T ss_dssp             ---------------C-TTSCCSEEEEC
T ss_pred             ---------------H-hcCCCCEEEEC
Confidence                           1 12458999886

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=85.91  E-value=0.82  Score=42.94  Aligned_cols=75  Identities=16%  Similarity=0.219  Sum_probs=47.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      .+|.|.|++|.||..++.+.+... ..+|++.....+   + +.++ +..+.+.-.+++..+.+++              
T Consensus       144 ~~VlV~Ga~G~vG~~a~qla~~~g-~~~V~~~~~~~~---~-~~~~-~ga~~~~~~~~~~~~~~~~--------------  203 (349)
T 4a27_A          144 MSVLVHSAGGGVGQAVAQLCSTVP-NVTVFGTASTFK---H-EAIK-DSVTHLFDRNADYVQEVKR--------------  203 (349)
T ss_dssp             CEEEESSTTSHHHHHHHHHHTTST-TCEEEEEECGGG---H-HHHG-GGSSEEEETTSCHHHHHHH--------------
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHcC-CcEEEEeCCHHH---H-HHHH-cCCcEEEcCCccHHHHHHH--------------
Confidence            589999999999999999988653 467887653322   2 3344 6666665433333333332              


Q ss_pred             HHHHHHHhcCCCCCEEEEeccC
Q 017567          157 EQGVIEAARHPDAVTVVTGIVG  178 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG  178 (369)
                            +. ...+|+|++++.|
T Consensus       204 ------~~-~~g~Dvv~d~~g~  218 (349)
T 4a27_A          204 ------IS-AEGVDIVLDCLCG  218 (349)
T ss_dssp             ------HC-TTCEEEEEEECC-
T ss_pred             ------hc-CCCceEEEECCCc
Confidence                  22 2358999998644

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=85.73  E-value=3.9  Score=39.23  Aligned_cols=47  Identities=26%  Similarity=0.353  Sum_probs=34.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQ  127 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~  127 (369)
                      +++|+|+|+ |-||..+...++.+  ..+|++.  ..+.+.+.+..+.+...
T Consensus       166 ~~~V~ViGa-G~iG~~~a~~l~~~--Ga~V~~~--d~~~~~~~~~~~~~g~~  212 (369)
T 2eez_A          166 PASVVILGG-GTVGTNAAKIALGM--GAQVTIL--DVNHKRLQYLDDVFGGR  212 (369)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHTTTS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhC--CCEEEEE--ECCHHHHHHHHHhcCce
Confidence            478999999 99999999999987  4567654  35666665444445544

>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}

Probab=85.61  E-value=3.6  Score=37.44  Aligned_cols=132  Identities=16%  Similarity=0.138  Sum_probs=75.4

Q ss_pred             CCCeeEEEEec-CChHhHHHHHHHHhCCCceEEEEEeecC-CHHHHHHHHHhhCCCEEEEcCc-----hhH-HHHHHHHh
Q 017567           74 DGPKPISVLGS-TGSIGTQTLDIVAEHEDKFRVVALAAGS-NITLLADQVKRFKPQVVAVRNE-----SLL-DEIKEALA  145 (369)
Q Consensus        74 ~~~kkI~ILGS-TGSIGtqTLdVI~~~pd~F~VvaLaag~-Nv~lL~eQ~~~FkP~~V~v~de-----~~~-~~l~~~l~  145 (369)
                      +.++||+||-| +||--...++-+++..-.++|+++..++ +..- .+.++++.-.+..+...     +.+ +++.+.|.
T Consensus         5 m~~~ri~vl~SG~gsnl~all~~~~~~~l~~~I~~Visn~~~a~~-l~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~   83 (209)
T 4ds3_A            5 MKRNRVVIFISGGGSNMEALIRAAQAPGFPAEIVAVFSDKAEAGG-LAKAEAAGIATQVFKRKDFASKEAHEDAILAALD   83 (209)
T ss_dssp             -CCEEEEEEESSCCHHHHHHHHHHTSTTCSEEEEEEEESCTTCTH-HHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHH
T ss_pred             CCCccEEEEEECCcHHHHHHHHHHHcCCCCcEEEEEEECCcccHH-HHHHHHcCCCEEEeCccccCCHHHHHHHHHHHHH
Confidence            34578999876 4555555555554433358999998864 3322 46788888776665321     111 23444444


Q ss_pred             cCCCCceEEecH-----HHHHHHhcCCCCCEEEEe----ccCccCcHHHHHHHHcCCc-----eeeecccceeecccchh
Q 017567          146 NVEEKPEILAGE-----QGVIEAARHPDAVTVVTG----IVGCAGLKPTVAAIEAGKD-----IALANKETLIAGGPFVL  211 (369)
Q Consensus       146 ~~~~~~~v~~G~-----~gl~~~~~~~~~D~Vv~A----IvG~aGL~pt~~Ai~~gK~-----iaLANKEsLV~aG~li~  211 (369)
                      ..+.+.-|++|-     +.+.+....    -++|=    +.-+-|..|...|+.+|.+     +-..+.+  +=.|++|.
T Consensus        84 ~~~~Dliv~agy~~il~~~~l~~~~~----~~iNiHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~--~D~G~Ii~  157 (209)
T 4ds3_A           84 VLKPDIICLAGYMRLLSGRFIAPYEG----RILNIHPSLLPLFPGLHTHQRALDAGMKLAGCTVHLVTEG--MDEGPILA  157 (209)
T ss_dssp             HHCCSEEEESSCCSCCCHHHHGGGTT----CEEEEESSCTTSSCSSCHHHHHHHTTCSEEEEEEEECCC----CCCCEEE
T ss_pred             hcCCCEEEEeccccCcCHHHHhhccC----CeEEECCccccCCCChhHHHHHHHcCCCeEEEEEEEEcCC--CCCCCeEE
Confidence            334445555553     233333221    23332    4567899999999999853     4445544  55778774


Q ss_pred             H
Q 017567          212 P  212 (369)
Q Consensus       212 ~  212 (369)
                      +
T Consensus       158 Q  158 (209)
T 4ds3_A          158 Q  158 (209)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=85.59  E-value=0.6  Score=41.79  Aligned_cols=32  Identities=19%  Similarity=0.166  Sum_probs=27.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      +|+|.|.|+||.||..+.+-+.+.  .++|+++.
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~--G~~V~~~~   34 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPM--AEILRLAD   34 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGG--EEEEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhc--CCEEEEEe
Confidence            578999999999999999888775  57787765

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=85.52  E-value=2.2  Score=39.36  Aligned_cols=50  Identities=10%  Similarity=0.161  Sum_probs=39.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEc
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVR  132 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~  132 (369)
                      .+|.|.|++|.||..++.+.+..  ..+|++.+   +-++ .+.++++..+.+.-.
T Consensus       154 ~~vlV~Ga~G~vG~~a~q~a~~~--Ga~vi~~~---~~~~-~~~~~~lGa~~~i~~  203 (321)
T 3tqh_A          154 DVVLIHAGAGGVGHLAIQLAKQK--GTTVITTA---SKRN-HAFLKALGAEQCINY  203 (321)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE---CHHH-HHHHHHHTCSEEEET
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHc--CCEEEEEe---ccch-HHHHHHcCCCEEEeC
Confidence            58999999999999999999987  46888875   2344 567888988876543

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=85.48  E-value=2.3  Score=40.53  Aligned_cols=45  Identities=18%  Similarity=0.109  Sum_probs=33.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQ  127 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaag~Nv~lL~eQ~~~FkP~  127 (369)
                      .+|.|.|+ |.||..++.+.+..  .. +|++..  .+-+++ +.++++..+
T Consensus       187 ~~VlV~Ga-G~vG~~aiqlAk~~--Ga~~Vi~~~--~~~~~~-~~a~~lGa~  232 (398)
T 1kol_A          187 STVYVAGA-GPVGLAAAASARLL--GAAVVIVGD--LNPARL-AHAKAQGFE  232 (398)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT--TCSEEEEEE--SCHHHH-HHHHHTTCE
T ss_pred             CEEEEECC-cHHHHHHHHHHHHC--CCCeEEEEc--CCHHHH-HHHHHcCCc
Confidence            58999995 99999999999976  44 566654  334444 566888875

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=85.47  E-value=1  Score=42.14  Aligned_cols=52  Identities=19%  Similarity=0.311  Sum_probs=37.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV  131 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v  131 (369)
                      .++|.|.|++|.||..+....+... ..+|++..  .|-+++ +.++++..+.+.-
T Consensus       171 g~~vlV~Gagg~iG~~~~~~a~~~~-Ga~Vi~~~--~~~~~~-~~~~~~g~~~~~~  222 (347)
T 1jvb_A          171 TKTLLVVGAGGGLGTMAVQIAKAVS-GATIIGVD--VREEAV-EAAKRAGADYVIN  222 (347)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHT-CCEEEEEE--SSHHHH-HHHHHHTCSEEEE
T ss_pred             CCEEEEECCCccHHHHHHHHHHHcC-CCeEEEEc--CCHHHH-HHHHHhCCCEEec
Confidence            3689999999999999999998752 25777654  344444 4557777776653

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=85.41  E-value=1.9  Score=44.18  Aligned_cols=33  Identities=27%  Similarity=0.401  Sum_probs=28.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      .|+|.|.|+||.||....+-+.+.  .++|+++.-
T Consensus        11 ~~~ilVTGatG~IG~~l~~~L~~~--G~~V~~~~r   43 (699)
T 1z45_A           11 SKIVLVTGGAGYIGSHTVVELIEN--GYDCVVADN   43 (699)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEEC
Confidence            468999999999999999988875  578988764

>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*

Probab=85.06  E-value=0.74  Score=42.24  Aligned_cols=95  Identities=14%  Similarity=0.151  Sum_probs=60.2

Q ss_pred             CCCCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHH-HHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCC
Q 017567           71 KTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNIT-LLADQVKRFKPQVVAVRNESLLDEIKEALANVEE  149 (369)
Q Consensus        71 ~~~~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~-lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~  149 (369)
                      -.++..++|+|.|+ |.+|++.+.-+......|+++|+--- |-+ +.   -+ .                  .+    .
T Consensus        79 Lg~~~~~~V~IvGa-G~lG~aLa~~~~~~~~g~~iVg~~D~-dp~~ki---G~-~------------------~i----~  130 (212)
T 3keo_A           79 LNDHSTTNVMLVGC-GNIGRALLHYRFHDRNKMQISMAFDL-DSNDLV---GK-T------------------TE----D  130 (212)
T ss_dssp             TTTTSCEEEEEECC-SHHHHHHTTCCCCTTSSEEEEEEEEC-TTSTTT---TC-B------------------CT----T
T ss_pred             hCCCCCCEEEEECc-CHHHHHHHHhhhcccCCeEEEEEEeC-Cchhcc---Cc-e------------------eE----C
Confidence            34566789999999 99999977764333457888887632 211 11   00 0                  00    1


Q ss_pred             CceEEecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCc
Q 017567          150 KPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (369)
Q Consensus       150 ~~~v~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~  194 (369)
                      ++.|+ |.+.+.++++..++|.++-|+.-...-.-.-.++++|.+
T Consensus       131 GvpV~-~~~dL~~~v~~~~Id~vIIAvPs~~aq~v~d~lv~~GIk  174 (212)
T 3keo_A          131 GIPVY-GISTINDHLIDSDIETAILTVPSTEAQEVADILVKAGIK  174 (212)
T ss_dssp             CCBEE-EGGGHHHHC-CCSCCEEEECSCGGGHHHHHHHHHHHTCC
T ss_pred             CeEEe-CHHHHHHHHHHcCCCEEEEecCchhHHHHHHHHHHcCCC
Confidence            24565 467788888888899999999776544444455556643

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=84.98  E-value=1.1  Score=45.96  Aligned_cols=35  Identities=20%  Similarity=0.394  Sum_probs=29.1

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      .+|+|.|.|+||+||...++-+.+.+ .++|+++.-
T Consensus       314 ~~~~VLVTGatG~IG~~l~~~Ll~~~-g~~V~~~~r  348 (660)
T 1z7e_A          314 RRTRVLILGVNGFIGNHLTERLLRED-HYEVYGLDI  348 (660)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHSS-SEEEEEEES
T ss_pred             cCceEEEEcCCcHHHHHHHHHHHhcC-CCEEEEEEc
Confidence            45789999999999999998887652 489998864

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=84.90  E-value=1.7  Score=40.50  Aligned_cols=91  Identities=10%  Similarity=0.080  Sum_probs=55.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhC-CCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEH-EDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~-pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      -.+|.|+|+ |.||..++.+.+.. |. .+|++..  ++-+++ +.++++..+.+.-.++. . .+              
T Consensus       171 g~~VlV~Ga-G~vG~~aiqlak~~~~G-a~Vi~~~--~~~~~~-~~~~~lGa~~vi~~~~~-~-~~--------------  229 (344)
T 2h6e_A          171 EPVVIVNGI-GGLAVYTIQILKALMKN-ITIVGIS--RSKKHR-DFALELGADYVSEMKDA-E-SL--------------  229 (344)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHCTT-CEEEEEC--SCHHHH-HHHHHHTCSEEECHHHH-H-HH--------------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHhcCC-CEEEEEe--CCHHHH-HHHHHhCCCEEeccccc-h-HH--------------
Confidence            358999999 99999999999875 22 5777765  344443 45677887766421110 0 00              


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcC
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~g  192 (369)
                           +.++.....+|+|++++.+-..+.-.+.+++.|
T Consensus       230 -----~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~  262 (344)
T 2h6e_A          230 -----INKLTDGLGASIAIDLVGTEETTYNLGKLLAQE  262 (344)
T ss_dssp             -----HHHHHTTCCEEEEEESSCCHHHHHHHHHHEEEE
T ss_pred             -----HHHhhcCCCccEEEECCCChHHHHHHHHHhhcC
Confidence                 112222236999999976543555555555443

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=84.69  E-value=1.8  Score=38.94  Aligned_cols=32  Identities=19%  Similarity=0.214  Sum_probs=26.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      .|++.|.|+||-||..+.+-+.+.  .++|+.+.
T Consensus        21 ~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~   52 (253)
T 2nm0_A           21 SRSVLVTGGNRGIGLAIARAFADA--GDKVAITY   52 (253)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEe
Confidence            368999999999999999988875  57777654

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=84.52  E-value=1.7  Score=41.02  Aligned_cols=87  Identities=13%  Similarity=0.208  Sum_probs=55.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      .+|.|+|+ |.||..++.+.+..  ..+|++.....  +++....+++..+.+.-.++  .+.+                
T Consensus       182 ~~VlV~Ga-G~vG~~a~qlak~~--Ga~Vi~~~~~~--~~~~~~~~~lGa~~vi~~~~--~~~~----------------  238 (357)
T 2cf5_A          182 LRGGILGL-GGVGHMGVKIAKAM--GHHVTVISSSN--KKREEALQDLGADDYVIGSD--QAKM----------------  238 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHH--TCEEEEEESST--THHHHHHTTSCCSCEEETTC--HHHH----------------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHC--CCeEEEEeCCh--HHHHHHHHHcCCceeecccc--HHHH----------------
Confidence            57999996 99999999999986  45788766443  34332233788777654322  1111                


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcC
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~g  192 (369)
                          .++.  ..+|+|++++.+-..+...+.+++.|
T Consensus       239 ----~~~~--~g~D~vid~~g~~~~~~~~~~~l~~~  268 (357)
T 2cf5_A          239 ----SELA--DSLDYVIDTVPVHHALEPYLSLLKLD  268 (357)
T ss_dssp             ----HHST--TTEEEEEECCCSCCCSHHHHTTEEEE
T ss_pred             ----HHhc--CCCCEEEECCCChHHHHHHHHHhccC
Confidence                1221  25899999976655677666655444

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=84.51  E-value=1.2  Score=42.03  Aligned_cols=48  Identities=13%  Similarity=0.186  Sum_probs=35.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec-CCHHHHHHHHHhhCCCEEEE
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-SNITLLADQVKRFKPQVVAV  131 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag-~Nv~lL~eQ~~~FkP~~V~v  131 (369)
                      .+|.|+|+ |.||..++.+.+..  ..+|++.... .+.+    .++++..+.+.-
T Consensus       181 ~~VlV~Ga-G~vG~~~~qlak~~--Ga~Vi~~~~~~~~~~----~~~~lGa~~v~~  229 (360)
T 1piw_A          181 KKVGIVGL-GGIGSMGTLISKAM--GAETYVISRSSRKRE----DAMKMGADHYIA  229 (360)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHH--TCEEEEEESSSTTHH----HHHHHTCSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHC--CCEEEEEcCCHHHHH----HHHHcCCCEEEc
Confidence            58999999 99999999999976  5678887643 3333    345677776653

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=84.42  E-value=3.3  Score=38.02  Aligned_cols=47  Identities=17%  Similarity=0.267  Sum_probs=31.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCC-CceEEEEEeecCCHHHHHHHHHhh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHE-DKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~p-d~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      .|++.|.|+||-||..+..-+.+.- ..++|+.+  .+|.+.+.+.+++.
T Consensus        33 ~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~--~r~~~~~~~~~~~l   80 (287)
T 3rku_A           33 KKTVLITGASAGIGKATALEYLEASNGDMKLILA--ARRLEKLEELKKTI   80 (287)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEE--ESCHHHHHHHHHHH
T ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCCCceEEEE--ECCHHHHHHHHHHH
Confidence            3689999999999999887765532 22366654  35666665555443

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=84.40  E-value=2.2  Score=39.99  Aligned_cols=46  Identities=9%  Similarity=0.031  Sum_probs=34.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+ +.+|.+.+.+...++
T Consensus        46 ~k~~lVTGas~GIG~aia~~La~~--G~~Vv~~-~~r~~~~~~~~~~~l   91 (328)
T 2qhx_A           46 VPVALVTGAAKRLGRSIAEGLHAE--GYAVCLH-YHRSAAEANALSATL   91 (328)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHT--TCEEEEE-ESSCHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEE-cCCCHHHHHHHHHHH
Confidence            368999999999999999998876  5777664 325666665554443

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=84.33  E-value=4.7  Score=38.95  Aligned_cols=47  Identities=26%  Similarity=0.340  Sum_probs=34.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQ  127 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~  127 (369)
                      +++|+|+|+ |.||.++...++.+  ..+|++.  ..+.+.+.+..+.+...
T Consensus       168 g~~V~ViG~-G~iG~~~a~~a~~~--Ga~V~~~--d~~~~~l~~~~~~~g~~  214 (377)
T 2vhw_A          168 PADVVVIGA-GTAGYNAARIANGM--GATVTVL--DINIDKLRQLDAEFCGR  214 (377)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHTTTS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhC--CCEEEEE--eCCHHHHHHHHHhcCCe
Confidence            478999998 99999999999987  4567654  45666664444445544

>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}

Probab=84.33  E-value=11  Score=33.98  Aligned_cols=131  Identities=17%  Similarity=0.183  Sum_probs=77.1

Q ss_pred             CeeEEEEe-cCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCch-----hH-HHHHHHHhcCC
Q 017567           76 PKPISVLG-STGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNES-----LL-DEIKEALANVE  148 (369)
Q Consensus        76 ~kkI~ILG-STGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~-----~~-~~l~~~l~~~~  148 (369)
                      |+||+||. .||+-....|+-+.+..-.++|+++..++--....+.|+++.-.+..+...+     .+ +++.+.|...+
T Consensus         3 m~ki~vl~sG~g~~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~~~~~~~~~~~~~~~~~l~~~~   82 (212)
T 3av3_A            3 MKRLAVFASGSGTNFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFSPKDYPSKAAFESEILRELKGRQ   82 (212)
T ss_dssp             CEEEEEECCSSCHHHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHHTT
T ss_pred             CcEEEEEEECCcHHHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeCcccccchhhhHHHHHHHHHhcC
Confidence            57898884 3677777777777654336899999887432345577888887776553221     11 23444444434


Q ss_pred             CCceEEecH-----HHHHHHhcCCCCCEEEE----eccCccCcHHHHHHHHcCCc-----eeeecccceeecccchhH
Q 017567          149 EKPEILAGE-----QGVIEAARHPDAVTVVT----GIVGCAGLKPTVAAIEAGKD-----IALANKETLIAGGPFVLP  212 (369)
Q Consensus       149 ~~~~v~~G~-----~gl~~~~~~~~~D~Vv~----AIvG~aGL~pt~~Ai~~gK~-----iaLANKEsLV~aG~li~~  212 (369)
                      .+.-|++|-     +.+.+....    -++|    -+.-+-|..|...||.+|.+     +-..+.+  +=+|+++.+
T Consensus        83 ~Dliv~a~y~~il~~~~l~~~~~----~~iNiHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~--~D~G~Ii~Q  154 (212)
T 3av3_A           83 IDWIALAGYMRLIGPTLLSAYEG----KIVNIHPSLLPAFPGKDAIGQAYRAGVSETGVTVHYVDEG--MDTGPVIAQ  154 (212)
T ss_dssp             CCEEEESSCCSCCCHHHHHHTTT----CEEEEESSCTTSSCSTTHHHHHHHHTCSEEEEEEEECCSS--SSCSCEEEE
T ss_pred             CCEEEEchhhhhCCHHHHhhhcC----CEEEEecCcCCCCCCcCHHHHHHHcCCCeEEEEEEEECCC--CCCCCEEEE
Confidence            444555553     233333321    2333    24668899999999999853     3334432  345777644

>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*

Probab=84.26  E-value=6.2  Score=35.69  Aligned_cols=130  Identities=16%  Similarity=0.179  Sum_probs=73.9

Q ss_pred             eeEEEEec-CChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCch-----hH-HHHHHHHhcCCC
Q 017567           77 KPISVLGS-TGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNES-----LL-DEIKEALANVEE  149 (369)
Q Consensus        77 kkI~ILGS-TGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~-----~~-~~l~~~l~~~~~  149 (369)
                      +||+||-| +||.-...++-+++..-.++|+++..+..-..-.+.|+++.-.+..+..++     .+ +++.+.|...+.
T Consensus         1 ~riaVl~SG~Gs~L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~~~   80 (209)
T 1meo_A            1 ARVAVLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEEFSI   80 (209)
T ss_dssp             CEEEEEESSSCTTHHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHHTTC
T ss_pred             CeEEEEEECCchHHHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHcCCCEEEECccccCchhhhhHHHHHHHHhcCC
Confidence            47888766 455555555655554446999999887643344567888887766553221     11 234444444344


Q ss_pred             CceEEecH-----HHHHHHhcCCCCCEEEE----eccCccCcHHHHHHHHcCCc-----eeeecccceeecccchhH
Q 017567          150 KPEILAGE-----QGVIEAARHPDAVTVVT----GIVGCAGLKPTVAAIEAGKD-----IALANKETLIAGGPFVLP  212 (369)
Q Consensus       150 ~~~v~~G~-----~gl~~~~~~~~~D~Vv~----AIvG~aGL~pt~~Ai~~gK~-----iaLANKEsLV~aG~li~~  212 (369)
                      +.-|++|-     +.+.+....    -++|    -+.-+-|..|...||.+|.+     |-..+.+  +=+|+++.+
T Consensus        81 Dliv~a~y~~il~~~~l~~~~~----~~iNiHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~--~D~G~Ii~Q  151 (209)
T 1meo_A           81 DIVCLAGFMRILSGPFVQKWNG----KMLNIHPSLLPSFKGSNAHEQALETGVTVTGCTVHFVAED--VDAGQIILQ  151 (209)
T ss_dssp             CEEEEESCCSCCCHHHHHHTTT----SEEEEESSSTTSSCSSCHHHHHHHHTCSEEEEEEEECCC-----CCCEEEE
T ss_pred             CEEEEcchhhhCCHHHHhhhcC----CEEEEccCcCcCCCCccHHHHHHHcCCCcEEEEEEEECCC--CcCCCEEEE
Confidence            45555553     334443321    2332    14568899999999999853     3444432  456777743

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=83.96  E-value=2.1  Score=40.82  Aligned_cols=86  Identities=14%  Similarity=0.193  Sum_probs=54.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      .+|.|+|+ |.||..++.+.+..  ..+|+++....  +++ +.++++..+.+.-..+..  .                 
T Consensus       196 ~~VlV~Ga-G~vG~~aiqlak~~--Ga~Vi~~~~~~--~~~-~~a~~lGa~~vi~~~~~~--~-----------------  250 (369)
T 1uuf_A          196 KKVGVVGI-GGLGHMGIKLAHAM--GAHVVAFTTSE--AKR-EAAKALGADEVVNSRNAD--E-----------------  250 (369)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESSG--GGH-HHHHHHTCSEEEETTCHH--H-----------------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHC--CCEEEEEeCCH--HHH-HHHHHcCCcEEeccccHH--H-----------------
Confidence            57999998 89999999999986  56788776432  222 345567777665332211  0                 


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcC
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~g  192 (369)
                         +.++.  ..+|+|++++.+-..+.-.+.+++.|
T Consensus       251 ---~~~~~--~g~Dvvid~~g~~~~~~~~~~~l~~~  281 (369)
T 1uuf_A          251 ---MAAHL--KSFDFILNTVAAPHNLDDFTTLLKRD  281 (369)
T ss_dssp             ---HHTTT--TCEEEEEECCSSCCCHHHHHTTEEEE
T ss_pred             ---HHHhh--cCCCEEEECCCCHHHHHHHHHHhccC
Confidence               11111  36999999987655565555544433

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=83.51  E-value=4.6  Score=36.25  Aligned_cols=33  Identities=21%  Similarity=0.320  Sum_probs=27.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.-
T Consensus         8 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r   40 (264)
T 2dtx_A            8 DKVVIVTGASMGIGRAIAERFVDE--GSKVIDLSI   40 (264)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEES
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEec
Confidence            368999999999999999988875  578887653

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=83.50  E-value=2.7  Score=38.39  Aligned_cols=46  Identities=9%  Similarity=0.031  Sum_probs=34.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      .|++.|.|+||-||..+..-+.+.  .++|+.+. ++|.+.+.+..+++
T Consensus         9 ~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~-~r~~~~~~~~~~~l   54 (291)
T 1e7w_A            9 VPVALVTGAAKRLGRSIAEGLHAE--GYAVCLHY-HRSAAEANALSATL   54 (291)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEE-SSCHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCeEEEEc-CCCHHHHHHHHHHH
Confidence            368999999999999999998876  57776643 35666665555443

>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*

Probab=83.39  E-value=7.5  Score=36.43  Aligned_cols=58  Identities=21%  Similarity=0.227  Sum_probs=44.9

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec-----------------CCHHHHHHHHHhhCCCEEEEcCch
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-----------------SNITLLADQVKRFKPQVVAVRNES  135 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag-----------------~Nv~lL~eQ~~~FkP~~V~v~de~  135 (369)
                      .+++|.|+|+ |.+|.....-+++.  .++|+++...                 .|.+.|.+.+++.+++.|....|.
T Consensus        10 ~~~~ili~g~-g~~~~~~~~a~~~~--G~~v~~~~~~~~~~~~~~~d~~~~~~~~d~~~l~~~~~~~~~d~v~~~~e~   84 (391)
T 1kjq_A           10 AATRVMLLGS-GELGKEVAIECQRL--GVEVIAVDRYADAPAMHVAHRSHVINMLDGDALRRVVELEKPHYIVPEIEA   84 (391)
T ss_dssp             TCCEEEEESC-SHHHHHHHHHHHTT--TCEEEEEESSTTCGGGGGSSEEEECCTTCHHHHHHHHHHHCCSEEEECSSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHc--CCEEEEEECCCCCchhhhccceEECCCCCHHHHHHHHHHcCCCEEEECCCc
Confidence            3578999998 67888877777764  6788887653                 467788999999999999886654

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=83.16  E-value=7  Score=36.76  Aligned_cols=51  Identities=18%  Similarity=0.289  Sum_probs=37.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEc
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVR  132 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~  132 (369)
                      .+|.|.|+ |.||..++.+.+..+. .+|++...  +-+++ +.++++..+++.-.
T Consensus       188 ~~VlV~Ga-G~vG~~avqlak~~~G-a~Vi~~~~--~~~~~-~~~~~lGa~~vi~~  238 (359)
T 1h2b_A          188 AYVAIVGV-GGLGHIAVQLLKVMTP-ATVIALDV--KEEKL-KLAERLGADHVVDA  238 (359)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCC-CEEEEEES--SHHHH-HHHHHTTCSEEEET
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCC-CeEEEEeC--CHHHH-HHHHHhCCCEEEec
Confidence            58999999 9999999999987633 47877653  33443 45678888877543

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=83.00  E-value=1.3  Score=38.84  Aligned_cols=32  Identities=19%  Similarity=0.329  Sum_probs=27.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      ||++.|.|+||.||..+.+-+.+.  .++|+++.
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~   32 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAA--GHQIVGID   32 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEe
Confidence            478999999999999999988875  57787764

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=82.97  E-value=6.7  Score=36.15  Aligned_cols=65  Identities=18%  Similarity=0.158  Sum_probs=42.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      |.+.|.|+++=||..+-.-+.+.  ..+|+...-+..-....+.+.+..++...+ .|-.+.+..++.
T Consensus         8 KvalVTGas~GIG~aia~~la~~--Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   73 (258)
T 4gkb_A            8 KVVIVTGGASGIGGAISMRLAEE--RAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDA   73 (258)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHH
Confidence            68999999999999998888875  677776554332233445555666655554 444444444443

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=82.94  E-value=1.7  Score=40.69  Aligned_cols=35  Identities=29%  Similarity=0.337  Sum_probs=26.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCC-----ceEEEEEee
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHED-----KFRVVALAA  110 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd-----~F~VvaLaa  110 (369)
                      ++||+|.|+||+||+....-+.+...     ..+|+.+--
T Consensus         4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~   43 (327)
T 1y7t_A            4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEI   43 (327)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeC
Confidence            46899999999999999888876421     127777643

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=82.54  E-value=2.4  Score=39.22  Aligned_cols=91  Identities=18%  Similarity=0.252  Sum_probs=58.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCc-hhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNE-SLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de-~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .+|.|+|+ |++|..++..+++.- ..+|++.+.  +-+++ +.++++..+.+.-..+ +..+++++             
T Consensus       165 ~~VlV~Ga-G~~g~~a~~~a~~~~-g~~Vi~~~~--~~~r~-~~~~~~Ga~~~i~~~~~~~~~~v~~-------------  226 (348)
T 4eez_A          165 DWQVIFGA-GGLGNLAIQYAKNVF-GAKVIAVDI--NQDKL-NLAKKIGADVTINSGDVNPVDEIKK-------------  226 (348)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTS-CCEEEEEES--CHHHH-HHHHHTTCSEEEEC-CCCHHHHHHH-------------
T ss_pred             CEEEEEcC-CCccHHHHHHHHHhC-CCEEEEEEC--cHHHh-hhhhhcCCeEEEeCCCCCHHHHhhh-------------
Confidence            47999997 889999998888642 467887663  44554 5788888888765433 22333333             


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcC
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~g  192 (369)
                             +.....+|.++....|-..+...+.+++.|
T Consensus       227 -------~t~g~g~d~~~~~~~~~~~~~~~~~~l~~~  256 (348)
T 4eez_A          227 -------ITGGLGVQSAIVCAVARIAFEQAVASLKPM  256 (348)
T ss_dssp             -------HTTSSCEEEEEECCSCHHHHHHHHHTEEEE
T ss_pred             -------hcCCCCceEEEEeccCcchhheeheeecCC
Confidence                   333335788888777766565555555444

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=82.37  E-value=6.4  Score=37.64  Aligned_cols=44  Identities=23%  Similarity=0.377  Sum_probs=32.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      +++|+|+|+ |-||..+...++...  .+|++.  .++.+++.+..+.+
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~~G--a~V~v~--dr~~~r~~~~~~~~  210 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVGLG--AQVQIF--DINVERLSYLETLF  210 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTT--CEEEEE--ESCHHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCC--CEEEEE--eCCHHHHHHHHHhh
Confidence            379999999 999999999999874  466653  45666665443333

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=82.19  E-value=8.5  Score=34.28  Aligned_cols=45  Identities=18%  Similarity=0.386  Sum_probs=31.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK  125 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~Fk  125 (369)
                      ++|+|+|+ |.+|+.....+.+.  .++++.+. .+|-+.+.+..+++.
T Consensus        11 m~i~iiG~-G~mG~~~a~~l~~~--g~~~v~~~-~~~~~~~~~~~~~~g   55 (266)
T 3d1l_A           11 TPIVLIGA-GNLATNLAKALYRK--GFRIVQVY-SRTEESARELAQKVE   55 (266)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHH--TCCEEEEE-CSSHHHHHHHHHHTT
T ss_pred             CeEEEEcC-CHHHHHHHHHHHHC--CCeEEEEE-eCCHHHHHHHHHHcC
Confidence            47999996 99999998888876  36655443 456666655555443

>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*

Probab=82.17  E-value=0.76  Score=41.76  Aligned_cols=90  Identities=13%  Similarity=0.085  Sum_probs=60.9

Q ss_pred             CCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCce
Q 017567           73 WDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPE  152 (369)
Q Consensus        73 ~~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~  152 (369)
                      ++..++|+|+|+ |.+|.+-++.+.... .|+++|+.-. |-++.-        +.  +                 .+..
T Consensus        77 ~~~~~rV~IIGa-G~~G~~la~~~~~~~-g~~iVg~~D~-dp~k~g--------~~--i-----------------~gv~  126 (211)
T 2dt5_A           77 LNRKWGLCIVGM-GRLGSALADYPGFGE-SFELRGFFDV-DPEKVG--------RP--V-----------------RGGV  126 (211)
T ss_dssp             TTSCEEEEEECC-SHHHHHHHHCSCCCS-SEEEEEEEES-CTTTTT--------CE--E-----------------TTEE
T ss_pred             cCCCCEEEEECc-cHHHHHHHHhHhhcC-CcEEEEEEeC-CHHHHh--------hh--h-----------------cCCe
Confidence            455678999996 899999887644445 8999998743 211110        00  0                 1133


Q ss_pred             EEecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCc
Q 017567          153 ILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (369)
Q Consensus       153 v~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~  194 (369)
                      |. +.+.+.++++. ++|.|+-|+...+.-.-...++++|++
T Consensus       127 V~-~~~dl~ell~~-~ID~ViIA~Ps~~~~ei~~~l~~aGi~  166 (211)
T 2dt5_A          127 IE-HVDLLPQRVPG-RIEIALLTVPREAAQKAADLLVAAGIK  166 (211)
T ss_dssp             EE-EGGGHHHHSTT-TCCEEEECSCHHHHHHHHHHHHHHTCC
T ss_pred             ee-cHHhHHHHHHc-CCCEEEEeCCchhHHHHHHHHHHcCCC
Confidence            44 46668888888 899999999877665666777777866

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=81.80  E-value=6.4  Score=38.29  Aligned_cols=47  Identities=15%  Similarity=0.303  Sum_probs=35.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQ  127 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaag~Nv~lL~eQ~~~FkP~  127 (369)
                      .++|.|+|+ |.||..+...++.+  .. +|++  ++++.+++.+.+++|..+
T Consensus       167 g~~VlIiGa-G~iG~~~a~~l~~~--G~~~V~v--~~r~~~ra~~la~~~g~~  214 (404)
T 1gpj_A          167 DKTVLVVGA-GEMGKTVAKSLVDR--GVRAVLV--ANRTYERAVELARDLGGE  214 (404)
T ss_dssp             TCEEEEESC-CHHHHHHHHHHHHH--CCSEEEE--ECSSHHHHHHHHHHHTCE
T ss_pred             CCEEEEECh-HHHHHHHHHHHHHC--CCCEEEE--EeCCHHHHHHHHHHcCCc
Confidence            368999998 99999999999876  34 4543  467778777778887643

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=81.71  E-value=1.3  Score=42.05  Aligned_cols=35  Identities=14%  Similarity=0.144  Sum_probs=26.2

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      .++||+|+|++|+||......+.+.+.-.+|+.+-
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~D   41 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYD   41 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEe
Confidence            45689999999999999988877654335666654

>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}

Probab=81.65  E-value=2.1  Score=40.48  Aligned_cols=32  Identities=25%  Similarity=0.261  Sum_probs=24.8

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEE
Q 017567           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVA  107 (369)
Q Consensus        74 ~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~Vva  107 (369)
                      +...+++|.|+||..|+..++-+.++  .|++++
T Consensus        11 ~~~~~v~V~Gasg~~G~~~~~~l~~~--g~~~V~   42 (294)
T 2yv1_A           11 DENTKAIVQGITGRQGSFHTKKMLEC--GTKIVG   42 (294)
T ss_dssp             CTTCCEEEETTTSHHHHHHHHHHHHT--TCCEEE
T ss_pred             CCCCEEEEECCCCCHHHHHHHHHHhC--CCeEEE
Confidence            33447888899999999999988886  576553

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=81.58  E-value=3.1  Score=42.12  Aligned_cols=39  Identities=15%  Similarity=0.199  Sum_probs=30.3

Q ss_pred             CCCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe-ecC
Q 017567           72 TWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA-AGS  112 (369)
Q Consensus        72 ~~~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa-ag~  112 (369)
                      .|...+.+.|.|+||-||..+.+-+.+.  ..+++.|. ..+
T Consensus       247 ~~~~~~~vLITGgsgGIG~~lA~~La~~--G~~~vvl~~~R~  286 (525)
T 3qp9_A          247 WWQADGTVLVTGAEEPAAAEAARRLARD--GAGHLLLHTTPS  286 (525)
T ss_dssp             SSCTTSEEEESSTTSHHHHHHHHHHHHH--TCCEEEEEECCC
T ss_pred             eecCCCEEEEECCCCcHHHHHHHHHHHc--CCCEEEEEeCCC
Confidence            4556678999999999999999888765  46666666 544

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=81.19  E-value=0.57  Score=43.14  Aligned_cols=49  Identities=14%  Similarity=0.367  Sum_probs=37.0

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV  131 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v  131 (369)
                      +|.|.|+||.||..++.+.+..  ..+|++.+...  ++ .+.++++..+.+.-
T Consensus       149 ~VlV~Ga~G~vG~~aiqla~~~--Ga~Vi~~~~~~--~~-~~~~~~lGa~~vi~  197 (324)
T 3nx4_A          149 EVVVTGASGGVGSTAVALLHKL--GYQVAAVSGRE--ST-HGYLKSLGANRILS  197 (324)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCG--GG-HHHHHHHTCSEEEE
T ss_pred             eEEEECCCcHHHHHHHHHHHHc--CCEEEEEeCCH--HH-HHHHHhcCCCEEEe
Confidence            4999999999999999999987  56888877432  22 24456688777653

>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}

Probab=80.38  E-value=5.5  Score=38.25  Aligned_cols=128  Identities=14%  Similarity=0.195  Sum_probs=77.7

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCC---CceEEEEEeecC-CHHHHHHHHHhhCCCEEEEc--Cc---hhHHHHHHHH
Q 017567           74 DGPKPISVLGSTGSIGTQTLDIVAEHE---DKFRVVALAAGS-NITLLADQVKRFKPQVVAVR--NE---SLLDEIKEAL  144 (369)
Q Consensus        74 ~~~kkI~ILGSTGSIGtqTLdVI~~~p---d~F~VvaLaag~-Nv~lL~eQ~~~FkP~~V~v~--de---~~~~~l~~~l  144 (369)
                      +.++||+||+|-.  |++..+++.+..   -..+|+++..++ ++.   +.++++.-.+..+.  ..   +.-+++.+.|
T Consensus       103 ~~~~ri~vl~Sg~--g~nl~~ll~~~~~g~l~~~I~~Visn~~~~~---~~A~~~gIp~~~~~~~~~~r~~~~~~~~~~l  177 (302)
T 3o1l_A          103 AQKKRVVLMASRE--SHCLADLLHRWHSDELDCDIACVISNHQDLR---SMVEWHDIPYYHVPVDPKDKEPAFAEVSRLV  177 (302)
T ss_dssp             TSCCEEEEEECSC--CHHHHHHHHHHHTTCSCSEEEEEEESSSTTH---HHHHTTTCCEEECCCCSSCCHHHHHHHHHHH
T ss_pred             CCCcEEEEEEeCC--chhHHHHHHHHHCCCCCcEEEEEEECcHHHH---HHHHHcCCCEEEcCCCcCCHHHHHHHHHHHH
Confidence            3467999999766  888888887532   257999998754 444   45788887776662  11   1112344444


Q ss_pred             hcCCCCceEEecH-----HHHHHHhcCCCCCEEEEe----ccCccCcHHHHHHHHcCCc-----eeeecccceeecccch
Q 017567          145 ANVEEKPEILAGE-----QGVIEAARHPDAVTVVTG----IVGCAGLKPTVAAIEAGKD-----IALANKETLIAGGPFV  210 (369)
Q Consensus       145 ~~~~~~~~v~~G~-----~gl~~~~~~~~~D~Vv~A----IvG~aGL~pt~~Ai~~gK~-----iaLANKEsLV~aG~li  210 (369)
                      ...+.+.-|+.|-     +.+.+....    -++|=    +..+-|..|...|+.+|-+     +-..+.|  +=.|++|
T Consensus       178 ~~~~~DliVlagym~IL~~~~l~~~~~----~~INiHpSlLP~frG~~p~~~Ai~~G~k~tG~TvH~v~~~--lD~GpII  251 (302)
T 3o1l_A          178 GHHQADVVVLARYMQILPPQLCREYAH----QVINIHHSFLPSFVGAKPYHQASLRGVKLIGATCHYVTEE--LDAGPII  251 (302)
T ss_dssp             HHTTCSEEEESSCCSCCCTTHHHHTTT----CEEEEESSCTTSSCSSCHHHHHHHHTCSEEEEEEEECCSS--TTCSCEE
T ss_pred             HHhCCCEEEHhHhhhhcCHHHHhhhhC----CeEEeCcccccCCCCccHHHHHHHcCCCeEEEEEEEECCC--CcCCCeE
Confidence            4434444455553     233333221    23432    5678899999999999953     3344544  4567877


Q ss_pred             hH
Q 017567          211 LP  212 (369)
Q Consensus       211 ~~  212 (369)
                      .+
T Consensus       252 ~Q  253 (302)
T 3o1l_A          252 EQ  253 (302)
T ss_dssp             EE
T ss_pred             EE
Confidence            54

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=80.20  E-value=22  Score=28.88  Aligned_cols=31  Identities=13%  Similarity=0.169  Sum_probs=24.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      .++|.|+|+ |.+|+...+.+.+.  .++|+.+.
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~--g~~V~vid   33 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQR--GQNVTVIS   33 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHT--TCCEEEEE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHC--CCCEEEEE
Confidence            357999996 99999999998876  46666655

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	369
d1q0qa3	149	d.81.1.3 (A:126-274) 1-deoxy-D-xylulose-5-phosphat	3e-52
d1r0ka3	138	d.81.1.3 (A:127-264) 1-deoxy-D-xylulose-5-phosphat	3e-49
d1q0qa2	151	c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-p	3e-41
d1r0ka2	150	c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-p	4e-35
d1t1ra3	26	c.2.1.3 (A:275-300) 1-deoxy-D-xylulose-5-phosphate	2e-04

>d1q0qa3 d.81.1.3 (A:126-274) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} Length = 149

class: Alpha and beta proteins (a+b)
fold: FwdE/GAPDH domain-like
superfamily: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
family: Dihydrodipicolinate reductase-like
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

 Score =  168 bits (427), Expect = 3e-52
 Identities = 69/149 (46%), Positives = 93/149 (62%), Gaps = 10/149 (6%)

Query: 201 ETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG----------LPEGALRRIILTA 250
           E+L+  G   +    +   ++LP DSEH+AIFQ +            L +  +  I+LT 
Sbjct: 1   ESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSILLTG 60

Query: 251 SGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDN 310
           SGG FR+ P+  L  +    A +HPNWSMG+KI+VDSAT+ NKGLE IEA +LF A    
Sbjct: 61  SGGPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFNASASQ 120

Query: 311 IEIIIHPQSIIHSMVETQDSSVIGQLGWP 339
           +E++IHPQS+IHSMV  QD SV+ QLG P
Sbjct: 121 MEVLIHPQSVIHSMVRYQDGSVLAQLGEP 149

>d1r0ka3 d.81.1.3 (A:127-264) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} Length = 138

class: Alpha and beta proteins (a+b)
fold: FwdE/GAPDH domain-like
superfamily: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
family: Dihydrodipicolinate reductase-like
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

 Score =  160 bits (406), Expect = 3e-49
 Identities = 67/138 (48%), Positives = 94/138 (68%)

Query: 202 TLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVE 261
           +L++ G  ++    +H   +LP DSEH+AIFQC        +RRII+TASGG FR   + 
Sbjct: 1   SLVSAGGLMIDAVREHGTTLLPVDSEHNAIFQCFPHHNRDYVRRIIITASGGPFRTTSLA 60

Query: 262 KLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIHPQSII 321
           ++  V    A++HPNWSMG KI++DSAT+ NKGLE+IEA +LF    +  EI++HPQS+I
Sbjct: 61  EMATVTPERAVQHPNWSMGAKISIDSATMMNKGLELIEAFHLFQIPLEKFEILVHPQSVI 120

Query: 322 HSMVETQDSSVIGQLGWP 339
           HSMVE  D S++ Q+G P
Sbjct: 121 HSMVEYLDGSILAQIGSP 138

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} Length = 151

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

 Score =  139 bits (352), Expect = 3e-41
 Identities = 58/149 (38%), Positives = 84/149 (56%), Gaps = 1/149 (0%)

Query: 77  KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
           K +++LGSTGSIG  TLD+V  + + FRVVAL AG N+T + +Q   F P+   + +E+ 
Sbjct: 2   KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEAS 61

Query: 137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
              +K  L     + E+L+G+Q   + A   D   V+  IVG AGL PT+AAI AGK I 
Sbjct: 62  AKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTIL 121

Query: 197 LANKETLIAGGPFVLPLAHKHNIKILPAD 225
           LANK+         +   ++ N  + P D
Sbjct: 122 LANKDMRTPIAHT-MAWPNRVNSGVKPLD 149

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} Length = 150

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

 Score =  124 bits (311), Expect = 4e-35
 Identities = 55/153 (35%), Positives = 80/153 (52%), Gaps = 6/153 (3%)

Query: 76  PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNES 135
           P+ ++VLG+TGSIG  TLD++  + D+++V+AL A  N+  LAD  KR   +   + + S
Sbjct: 2   PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPS 61

Query: 136 LLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI 195
           L +++KEALA    +    A             A   +  I+GCAGLK T+AAI  GK +
Sbjct: 62  LYNDLKEALAGSSVEAAAGADALVEA---AMMGADWTMAAIIGCAGLKATLAAIRKGKTV 118

Query: 196 ALANKETLIAGGPFVLPLAHKHNIKILPADSEH 228
           ALANKE +       L           PA+S  
Sbjct: 119 ALANKEDMRTPIGHTLA---WPKRMETPAESLD 148

>d1t1ra3 c.2.1.3 (A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} Length = 26

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

 Score = 36.1 bits (84), Expect = 2e-04
 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 3/29 (10%)

Query: 341 MRLPIIYTMSWPERIYCSELTWPRLDLSK 369
           MR PI +TM+WP R+         LD  K
Sbjct: 1   MRTPIAHTMAWPNRV---NSGVKPLDFCK 26

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	369
d1q0qa3	149	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	100.0
d1r0ka3	138	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	100.0
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	100.0
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	100.0
d1t1ra3	26	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	98.73
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	97.87
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	97.46
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	97.46
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.45
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	97.45
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	97.4
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	97.29
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	97.25
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	97.19
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.16
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	97.16
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	97.07
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	96.92
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	96.84
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	96.75
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	96.74
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	96.67
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	96.64
d1ebfa1	168	Homoserine dehydrogenase {Baker's yeast (Saccharom	96.61
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	96.58
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	96.55
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	96.53
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	96.36
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	96.33
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	96.28
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	96.28
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	96.25
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	96.24
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	96.15
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	96.05
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	95.92
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	95.9
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	95.86
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	95.83
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.82
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	95.82
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	95.69
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	95.68
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.68
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	95.67
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	95.59
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	95.56
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	95.23
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	95.15
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	95.13
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	95.12
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	94.92
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	94.8
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	94.71
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	94.6
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	94.56
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	94.49
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	94.43
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	94.1
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	94.01
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	93.69
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	93.6
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	93.59
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	93.55
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	93.52
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	93.51
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	93.4
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	93.39
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	93.28
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	93.25
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	93.22
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	93.21
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	93.21
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	93.15
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	92.98
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	92.91
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	92.87
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	92.84
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	92.67
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	92.65
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	92.63
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	92.58
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	92.51
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	92.51
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	92.46
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	92.42
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	92.4
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	92.38
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	91.7
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	91.62
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	91.24
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.05
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	90.99
d1lc0a1	172	Biliverdin reductase {Rat (Rattus norvegicus) [Tax	90.85
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	90.84
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	90.71
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	90.69
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	90.61
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	90.45
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	90.35
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	90.34
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	90.31
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	90.03
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	89.88
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	89.72
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	89.45
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	89.32
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	89.19
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	89.11
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	88.95
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	88.86
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	88.69
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	88.36
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	87.86
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	87.78
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	87.75
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	87.46
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	87.42
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	87.32
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	87.09
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	86.92
d1neka2	330	Succinate dehydogenase {Escherichia coli [TaxId: 5	86.77
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	86.65
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	86.64
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	86.3
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	85.75
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	85.64
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	85.53
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	85.38
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	85.28
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	84.92
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	84.83
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	84.74
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	84.25
d1kf6a2	311	Fumarate reductase {Escherichia coli [TaxId: 562]}	84.1
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	84.05
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	83.89
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	83.88
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	83.43
d1xrsb1	160	D-lysine 5,6-aminomutase beta subunit KamE, C-term	83.42
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	83.34
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	83.15
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	83.04
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	82.97
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	82.79
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	82.74
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	82.3
d1s8na_	190	Probable two-component system transcriptional regu	82.15
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	81.92
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	81.54
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	81.34
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	81.28
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	81.1
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	80.8
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	80.52
d3bula2	156	Methionine synthase, C-terminal domain {Escherichi	80.17

>d1q0qa3 d.81.1.3 (A:126-274) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: FwdE/GAPDH domain-like
superfamily: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
family: Dihydrodipicolinate reductase-like
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.2e-80  Score=542.91  Aligned_cols=139  Identities=49%  Similarity=0.823  Sum_probs=135.0

Q ss_pred             cceeecccchhHHhhhcCCeEeecccchhhHHHhhcCC----------CCCccceEEEeecCCCCCCCChhhhccCCHHH
Q 017567          201 ETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGL----------PEGALRRIILTASGGAFRDWPVEKLKEVKVAD  270 (369)
Q Consensus       201 EsLV~aG~li~~~a~k~~~~IlPVDSEHsAIfQ~L~g~----------~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~d  270 (369)
                      |||||||++|++.++++|++|+|||||||||||||++.          +.+.|++|+|||||||||+++.++|++||++|
T Consensus         1 EslV~aG~li~~~akk~~~~iiPvDSEH~AIfQ~l~~~~~~~~~~~~~~~~~I~ki~LTASGGPF~~~~~~~l~~vt~~~   80 (149)
T d1q0qa3           1 ESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPLRDLATMTPDQ   80 (149)
T ss_dssp             HHHHHHTHHHHHHHHHHTCEEEECSHHHHHHHHTSCHHHHTTTTTSCTGGGTEEEEEEEECCCTTTTSCGGGGGGCCHHH
T ss_pred             CcEEEcHHHHHHHHHHcCCeEEecChHHHHHHHHhhhhhhcccccccccccceeEEEEEcCCccccccchhhhhccCHHH
Confidence            89999999999999999999999999999999999752          34579999999999999999999999999999


Q ss_pred             hhcCCCCCCCCccceehhhhcchhHHHhhhhhhcCCCCCceeEEEcCCcceeeeEEeccCcEEEecCCC
Q 017567          271 ALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIHPQSIIHSMVETQDSSVIGQLGWP  339 (369)
Q Consensus       271 ALkHP~W~MG~KITIDSATmmNKgLEvIEA~~LF~i~~d~IevvIHPqSiIHsmVef~DGSv~Aql~~P  339 (369)
                      ||+||||+||+||||||||||||||||||||||||+++++|+|||||||||||||+|.|||++||||.|
T Consensus        81 Al~HP~W~MG~KIsIDSATmmNKglEvIEA~~LF~l~~~kI~v~IHpqSiiHs~V~f~DGs~~a~~~~P  149 (149)
T d1q0qa3          81 ACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFNASASQMEVLIHPQSVIHSMVRYQDGSVLAQLGEP  149 (149)
T ss_dssp             HHCCSSCCCCHHHHHHHHHTHHHHHHHHHHHHHHTCCGGGEEEEECTTCCEEEEEEETTSCEEEEECCS
T ss_pred             HhhCCcccccceeeccHHHHHHHHHHHHHHHHHhCCCHHHEEEEECCCCeeeEEEEECCCCEEEeccCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999988

>d1r0ka3 d.81.1.3 (A:127-264) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a+b)
fold: FwdE/GAPDH domain-like
superfamily: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
family: Dihydrodipicolinate reductase-like
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=100.00  E-value=7.1e-80  Score=535.64  Aligned_cols=138  Identities=49%  Similarity=0.838  Sum_probs=130.7

Q ss_pred             ceeecccchhHHhhhcCCeEeecccchhhHHHhhcCCCCCccceEEEeecCCCCCCCChhhhccCCHHHhhcCCCCCCCC
Q 017567          202 TLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGK  281 (369)
Q Consensus       202 sLV~aG~li~~~a~k~~~~IlPVDSEHsAIfQ~L~g~~~~~v~kiiLTASGGPFr~~~~e~l~~vT~~dALkHP~W~MG~  281 (369)
                      ||||||+++++.+++++++|+|||||||||||||++.+.+.|++|+|||||||||++++++|++||++|||+||||+||+
T Consensus         1 SlV~aG~li~~~~~k~~~~IiPIDSEH~AI~Q~L~~~~~~~I~kI~LTASGGPF~~~~~~~l~~vt~~~al~HP~W~MG~   80 (138)
T d1r0ka3           1 SLVSAGGLMIDAVREHGTTLLPVDSEHNAIFQCFPHHNRDYVRRIIITASGGPFRTTSLAEMATVTPERAVQHPNWSMGA   80 (138)
T ss_dssp             HHHTTHHHHHHHHHHHTCEEEECSHHHHHHHHHCCTTCGGGEEEEEEEECCCTTTTCCHHHHTTCCHHHHHC------CH
T ss_pred             CEEechHHHHHHHHHcCCeEEecCchHHHHHHHHhhcCcccccEEEEeccchhhhcchHHHhhcCCHHHHhcCCeeeccc
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccceehhhhcchhHHHhhhhhhcCCCCCceeEEEcCCcceeeeEEeccCcEEEecCCC
Q 017567          282 KITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIHPQSIIHSMVETQDSSVIGQLGWP  339 (369)
Q Consensus       282 KITIDSATmmNKgLEvIEA~~LF~i~~d~IevvIHPqSiIHsmVef~DGSv~Aql~~P  339 (369)
                      |||||||||||||||+||||||||+++|+|||||||||||||||+|.|||++||||.|
T Consensus        81 KisIDSATmmNK~lEvIEA~~LF~~~~~~I~v~IHpqsiiHs~V~f~Dgs~~a~~~~P  138 (138)
T d1r0ka3          81 KISIDSATMMNKGLELIEAFHLFQIPLEKFEILVHPQSVIHSMVEYLDGSILAQIGSP  138 (138)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHCCCGGGEEEEECTTCCEEEEEEETTSCEEEEECCS
T ss_pred             eeeccHHHHHHHHHhHHHHHHHHCcCHHHeEEEECCCceEEEEEEECCCcEEEeccCC
Confidence            9999999999999999999999999999999999999999999999999999999988

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=100.00  E-value=3.7e-53  Score=371.08  Aligned_cols=149  Identities=40%  Similarity=0.575  Sum_probs=139.9

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEE
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      .||+|+|||||||||+||||||++|||+|+|++|+|++|+++|.+|+++|+|++|++.|+..++++++.+.+  .+++++
T Consensus         1 ~pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~~~~~l~~~~~~--~~~~v~   78 (150)
T d1r0ka2           1 QPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAG--SSVEAA   78 (150)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTT--CSSEEE
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhccccceeccHHHHHHHHHHhhh--cccccc
Confidence            489999999999999999999999999999999999999999999999999999999999999999998764  458999


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeecccchhHHhhhcCCeEeecccchh
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHS  229 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~~~~IlPVDSEHs  229 (369)
                      .|.+++.+++. .++|+||+||+|++||.||++|+++||+|||||||||||||.++++.+   +.+|+||||||+
T Consensus        79 ~g~~~l~~~~~-~~~D~vv~Ai~G~~GL~~tl~ai~~gk~iaLANKEslV~ag~~~l~~~---~~~iiPvDSEH~  149 (150)
T d1r0ka2          79 AGADALVEAAM-MGADWTMAAIIGCAGLKATLAAIRKGKTVALANKEDMRTPIGHTLAWP---KRMETPAESLDF  149 (150)
T ss_dssp             ESHHHHHHHHT-SCCSEEEECCCSGGGHHHHHHHHHTTSEEEECCSHCTHHHHHHHHHTT---SCCCCCCCCCCH
T ss_pred             cCccchheecc-cccceeeeecCchhHHHHHHHHHhcCCEEEEecchhhhhhhHHHHHHc---CCcCcCccCCcC
Confidence            99999999875 579999999999999999999999999999999999999998887654   567999999997

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.1e-52  Score=367.04  Aligned_cols=149  Identities=39%  Similarity=0.580  Sum_probs=143.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      ||+|+|||||||||+||||||++|||+|+|++|+||+|+++|.+|+++|+|++|++.|++.++++++.+.+...+++++.
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~   80 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLS   80 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEE
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhcccccccc
Confidence            68999999999999999999999999999999999999999999999999999999999999999998876667899999


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeecccchhHHhhhcCCeEeecc
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPAD  225 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~~~~IlPVD  225 (369)
                      |++++.++++.+++|+||+||||++||.||++|+++||+|||||||||||||+ +|+.++|++++|+|||
T Consensus        81 g~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~iaLANKEslV~aG~-i~~~~~k~~~~IiPVD  149 (151)
T d1q0qa2          81 GQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLANKDMRTPIAH-TMAWPNRVNSGVKPLD  149 (151)
T ss_dssp             SHHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEECCHCTHHHHHH-HHHTTSCCCCSCCCCC
T ss_pred             ChHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcCCeEEEEccHHHHhHHH-HHHHHHHhCCcEEcCc
Confidence            99999999999999999999999999999999999999999999999999998 5678999999999999

>d1t1ra3 c.2.1.3 (A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=98.73  E-value=1.5e-09  Score=68.67  Aligned_cols=26  Identities=46%  Similarity=0.799  Sum_probs=24.1

Q ss_pred             chhHHHhccCCCCccccCCCCCCCCCCCC
Q 017567          341 MRLPIIYTMSWPERIYCSELTWPRLDLSK  369 (369)
Q Consensus       341 MrlPI~yAL~yP~R~~~~~~~~~~ldl~~  369 (369)
                      ||+||+|||.||||+   +.++++|||++
T Consensus         1 MRtPIA~aLa~PeRi---~sgv~~LDl~k   26 (26)
T d1t1ra3           1 MRTPIAHTMAWPNRV---NSGVKPLDFCK   26 (26)
T ss_dssp             THHHHHHHHHTTSCC---CCCCCCCCTTS
T ss_pred             CCchhhhhccCcccc---ccCCccccccC
Confidence            999999999999999   56899999975

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=97.87  E-value=7.2e-05  Score=63.05  Aligned_cols=138  Identities=15%  Similarity=0.138  Sum_probs=94.5

Q ss_pred             CeeEEEEecCChHhHH-HHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEE
Q 017567           76 PKPISVLGSTGSIGTQ-TLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtq-TLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      +-||+|+| +|++|+. -+..+++.++.|+|+|++ .+|.+...+.+++|.-..++                        
T Consensus         3 kirigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~-d~~~~~~~~~~~~~~~~~~~------------------------   56 (181)
T d1zh8a1           3 KIRLGIVG-CGIAARELHLPALKNLSHLFEITAVT-SRTRSHAEEFAKMVGNPAVF------------------------   56 (181)
T ss_dssp             CEEEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEE-CSSHHHHHHHHHHHSSCEEE------------------------
T ss_pred             CcEEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEE-eccHhhhhhhhcccccccee------------------------
Confidence            34899999 6999987 599999999999999976 45667666666666532221                        


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccce--eecccchhHHhhhcCCeEeec--------
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILPA--------  224 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsL--V~aG~li~~~a~k~~~~IlPV--------  224 (369)
                         ..+.++.+.+++|.|+.+..-..-...+.+|+++||.|.+ -|=.-  +.-..-+.+++++++..+...        
T Consensus        57 ---~~~~ell~~~~id~v~I~tp~~~h~~~~~~al~~gk~V~~-EKPl~~~~~e~~~l~~~~~~~~~~~~v~~~~R~~~~  132 (181)
T d1zh8a1          57 ---DSYEELLESGLVDAVDLTLPVELNLPFIEKALRKGVHVIC-EKPISTDVETGKKVVELSEKSEKTVYIAENFRENSY  132 (181)
T ss_dssp             ---SCHHHHHHSSCCSEEEECCCGGGHHHHHHHHHHTTCEEEE-ESSSSSSHHHHHHHHHHHHHCSSCEEEECGGGCCHH
T ss_pred             ---eeeeccccccccceeeccccccccccccccccccchhhhc-CCCCcCCHHHHHHHHHHHHHhCCeEEEEeecccccc
Confidence               1235666677899999998888888999999999999865 33111  112344678888988777532        


Q ss_pred             ccchhhHHHhhcCCCCCcc
Q 017567          225 DSEHSAIFQCIQGLPEGAL  243 (369)
Q Consensus       225 DSEHsAIfQ~L~g~~~~~v  243 (369)
                      +.+...+.|.+....-.+|
T Consensus       133 ~~~~~~~~~~i~~G~ig~i  151 (181)
T d1zh8a1         133 QKEFEDFYQVVAEGKPNDL  151 (181)
T ss_dssp             HHHHHHHHHHHHSCCCCSS
T ss_pred             CHHHHHHHHHHHCCCCccC
Confidence            2333455566654333333

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.46  E-value=0.00047  Score=57.65  Aligned_cols=130  Identities=12%  Similarity=0.098  Sum_probs=91.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      -||+|+| +|.+|+.-+..++..+ +|+|+|+.. .|.+++.+.+++|.-..                     ..+++  
T Consensus         2 iki~iIG-~G~~g~~~~~~l~~~~-~~~i~ai~d-~~~~~~~~~~~~~~~~~---------------------~~~~~--   55 (184)
T d1ydwa1           2 IRIGVMG-CADIARKVSRAIHLAP-NATISGVAS-RSLEKAKAFATANNYPE---------------------STKIH--   55 (184)
T ss_dssp             EEEEEES-CCTTHHHHHHHHHHCT-TEEEEEEEC-SSHHHHHHHHHHTTCCT---------------------TCEEE--
T ss_pred             eEEEEEc-CCHHHHHHHHHHHhCC-CCEEEEEEe-CCccccccchhcccccc---------------------ceeec--
Confidence            4899999 5999999999998875 699999764 47777777777765210                     11222  


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeee----cccceeecccchhHHhhhcCCeEe-ecccchhhH
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALA----NKETLIAGGPFVLPLAHKHNIKIL-PADSEHSAI  231 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLA----NKEsLV~aG~li~~~a~k~~~~Il-PVDSEHsAI  231 (369)
                       +.+.++.+.+++|.|+.+..-..-...+..|+++||.|.+-    ..   +.-..-+.+++++++..+. -----|+..
T Consensus        56 -~~~~~ll~~~~iD~v~I~tp~~~h~~~~~~~l~~g~~v~~EKP~~~~---~~e~~~l~~~~~~~~~~~~v~~~~r~~~~  131 (184)
T d1ydwa1          56 -GSYESLLEDPEIDALYVPLPTSLHVEWAIKAAEKGKHILLEKPVAMN---VTEFDKIVDACEANGVQIMDGTMWVHPQE  131 (184)
T ss_dssp             -SSHHHHHHCTTCCEEEECCCGGGHHHHHHHHHTTTCEEEECSSCSSS---HHHHHHHHHHHHTTTCCEEECCCGGGCHH
T ss_pred             -CcHHHhhhccccceeeecccchhhcchhhhhhhccceeecccccccC---HHHHHHHHHHHHhhCCEEEEEEeeecChH
Confidence             23456666778999999988888889999999999998752    11   1124456788888887664 222346666


Q ss_pred             HHhhc
Q 017567          232 FQCIQ  236 (369)
Q Consensus       232 fQ~L~  236 (369)
                      |+.|+
T Consensus       132 ~~~~k  136 (184)
T d1ydwa1         132 ACMVR  136 (184)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            66665

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=97.46  E-value=9.3e-05  Score=62.67  Aligned_cols=110  Identities=17%  Similarity=0.318  Sum_probs=67.0

Q ss_pred             CeeEEEEecCChHhHHHH-HHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEE
Q 017567           76 PKPISVLGSTGSIGTQTL-DIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTL-dVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      +-||+|+| ||.||++.+ ++++++ +.+++++++..+.-..=.+.+++|...+.                        .
T Consensus         4 kirvaIIG-aG~ig~~~~~~~l~~~-~~~el~avas~~~~~~~~~~a~~~~i~~~------------------------~   57 (157)
T d1nvmb1           4 KLKVAIIG-SGNIGTDLMIKVLRNA-KYLEMGAMVGIDAASDGLARAQRMGVTTT------------------------Y   57 (157)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHHHC-SSEEEEEEECSCTTCHHHHHHHHTTCCEE------------------------S
T ss_pred             CcEEEEEc-CcHHHHHHHHHHHhhC-CcceEEEEEecchhccchhhhhhcCCccc------------------------c
Confidence            34899999 999999875 777766 55899999764322222344555554332                        1


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccC--cHHHHHHHHcCCceeeecccceeecccchhHHh
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAG--LKPTVAAIEAGKDIALANKETLIAGGPFVLPLA  214 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aG--L~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a  214 (369)
                      .|.+++.+..+..++|+|..|..--..  -....+|.++|+.+ +-|+=.-+  |+|+-+.+
T Consensus        58 ~~~d~l~~~~~~~~iDiVf~ATpag~h~~~~~~~~aa~~G~~V-ID~s~a~~--vplvVPev  116 (157)
T d1nvmb1          58 AGVEGLIKLPEFADIDFVFDATSASAHVQNEALLRQAKPGIRL-IDLTPAAI--GPYCVPVV  116 (157)
T ss_dssp             SHHHHHHHSGGGGGEEEEEECSCHHHHHHHHHHHHHHCTTCEE-EECSTTCS--SCBCCHHH
T ss_pred             cceeeeeecccccccCEEEEcCCchhHHHhHHHHHHHHcCCEE-EEcccccc--ceEEccCc
Confidence            123344444445579999998763322  34667788999875 33432211  56665544

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.45  E-value=6.3e-05  Score=63.90  Aligned_cols=35  Identities=20%  Similarity=0.387  Sum_probs=32.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (369)
                      |.||+|+||||.+|...++++.+||+ |+|..|++.
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~-~ei~~l~~~   35 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPH-MTITALTVS   35 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTT-EEEEEEEEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCC-CceEeeEee
Confidence            57999999999999999999999987 999999764

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=97.45  E-value=0.00037  Score=61.11  Aligned_cols=94  Identities=12%  Similarity=0.150  Sum_probs=74.2

Q ss_pred             CCCeeEEEEecC---ChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCC
Q 017567           74 DGPKPISVLGST---GSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEK  150 (369)
Q Consensus        74 ~~~kkI~ILGST---GSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~  150 (369)
                      ..|-||+|+|..   |.++..-+..+++..++|+|+|++ ..|.+...+.+++|..+.+...                  
T Consensus        14 ~k~irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~-d~~~~~~~~~~~~~~~~~~~~~------------------   74 (237)
T d2nvwa1          14 SRPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALY-NPTLKSSLQTIEQLQLKHATGF------------------   74 (237)
T ss_dssp             GCCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEE-CSCHHHHHHHHHHTTCTTCEEE------------------
T ss_pred             CCCeEEEEEecCccccHHHHHHHHHHHhcCCCeEEEEEE-cCCHHHHHHHHHhcccccceee------------------
Confidence            345699999974   468888899999888899999986 5688888888888875433221                  


Q ss_pred             ceEEecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCC
Q 017567          151 PEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGK  193 (369)
Q Consensus       151 ~~v~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK  193 (369)
                             +...++.+.+++|.|+.+..-..-...+.+|+++|+
T Consensus        75 -------~~~~~l~~~~~iD~V~i~tp~~~h~~~~~~al~aG~  110 (237)
T d2nvwa1          75 -------DSLESFAQYKDIDMIVVSVKVPEHYEVVKNILEHSS  110 (237)
T ss_dssp             -------SCHHHHHHCTTCSEEEECSCHHHHHHHHHHHHHHSS
T ss_pred             -------cchhhcccccccceeeccCCCcchhhHHHHHHHhcc
Confidence                   123456667789999999998888999999999996

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=97.40  E-value=0.00042  Score=60.48  Aligned_cols=124  Identities=17%  Similarity=0.127  Sum_probs=86.0

Q ss_pred             CCCeeEEEEecCChHhHH-HHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCce
Q 017567           74 DGPKPISVLGSTGSIGTQ-TLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPE  152 (369)
Q Consensus        74 ~~~kkI~ILGSTGSIGtq-TLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~  152 (369)
                      +.+-||+|+|+ |.+|++ -+..++++ ++|+|+|++. .|.+.+.+-+++|..+-..+                    .
T Consensus        31 ~~~iriaiIG~-G~~~~~~~~~~~~~~-~~~~ivav~d-~~~~~a~~~~~~~~i~~~~~--------------------~   87 (221)
T d1h6da1          31 DRRFGYAIVGL-GKYALNQILPGFAGC-QHSRIEALVS-GNAEKAKIVAAEYGVDPRKI--------------------Y   87 (221)
T ss_dssp             CCCEEEEEECC-SHHHHHTHHHHTTTC-SSEEEEEEEC-SCHHHHHHHHHHTTCCGGGE--------------------E
T ss_pred             CCCEEEEEEcC-cHHHHHHHHHHHHhC-CCceEEEEec-CCHHHHHHHHHhhccccccc--------------------c
Confidence            34569999995 999986 46777765 5799999764 58888888888885321100                    0


Q ss_pred             EEecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeeccc-ceeecccchhHHhhhcCCeEee
Q 017567          153 ILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKE-TLIAGGPFVLPLAHKHNIKILP  223 (369)
Q Consensus       153 v~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKE-sLV~aG~li~~~a~k~~~~IlP  223 (369)
                      .+   +.+.++++.+++|.|+.+..=..-...+.+|+++||.|.+--== .=+....-|.++++++++.+..
T Consensus        88 ~~---~d~~ell~~~~iD~V~I~tp~~~H~~~~~~al~~gk~v~~EKPla~~~~e~~~l~~~a~~~~~~~~v  156 (221)
T d1h6da1          88 DY---SNFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMI  156 (221)
T ss_dssp             CS---SSGGGGGGCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred             cc---CchhhhcccccceeeeeccchhhhhhHHHHhhhcchhhhcCCCccCCHHHHHHHHHHHHhcCCcEEE
Confidence            00   12356677788999999888888889999999999998642100 0111244567888888877653

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=97.29  E-value=0.00012  Score=62.65  Aligned_cols=42  Identities=26%  Similarity=0.472  Sum_probs=36.2

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHH
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLL  117 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL  117 (369)
                      .+.||+|+|+||..|..-++++.+||+ |+++.++..++..+.
T Consensus         4 ~kikVaIlGATGyvG~elirLL~~HP~-~ei~~l~S~~~aG~~   45 (183)
T d2cvoa1           4 EEVRIAVLGASGYTGAEIVRLLANHPQ-FRIKVMTADRKAGEQ   45 (183)
T ss_dssp             SCEEEEEESCSSHHHHHHHHHHTTCSS-EEEEEEECSTTTTSC
T ss_pred             CccEEEEECcccHHHHHHHHHHHhCCC-ceEEEEeccccCCCc
Confidence            355999999999999999999999985 999999877765443

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=97.19  E-value=0.00069  Score=56.58  Aligned_cols=113  Identities=12%  Similarity=0.096  Sum_probs=74.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      +.||+|+| +|.||+.-++.++++|+ |++++++..+. +.    .  .+                         ..+..
T Consensus         3 kirvgiiG-~G~ig~~~~~~l~~~~~-~elvav~~~~~-~~----~--~~-------------------------~~~~~   48 (170)
T d1f06a1           3 NIRVAIVG-YGNLGRSVEKLIAKQPD-MDLVGIFSRRA-TL----D--TK-------------------------TPVFD   48 (170)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHTTCSS-EEEEEEEESSS-CC----S--SS-------------------------SCEEE
T ss_pred             cceEEEEC-ChHHHHHHHHHHHhCCC-cEEEEEEeccc-cc----c--cc-------------------------ccccc
Confidence            45899999 59999999999999876 99999876542 10    0  00                         11111


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeec--ccchhHHhhhcCCeEeeccc
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAG--GPFVLPLAHKHNIKILPADS  226 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~a--G~li~~~a~k~~~~IlPVDS  226 (369)
                      ..+ ..++  ..++|.|+.+..-..-..-..+|+++||.+.+.-|...-..  -..+.++|++.|..++ |.+
T Consensus        49 ~~~-~~~~--~~~~D~Vvi~tp~~~h~~~a~~aL~aG~~vv~~~~~~~~~~~~~~~l~~~A~~~~~~~~-i~~  117 (170)
T d1f06a1          49 VAD-VDKH--ADDVDVLFLCMGSATDIPEQAPKFAQFACTVDTYDNHRDIPRHRQVMNEAATAAGNVAL-VST  117 (170)
T ss_dssp             GGG-GGGT--TTTCSEEEECSCTTTHHHHHHHHHTTTSEEECCCCCGGGHHHHHHHHHHHHHHHTCEEE-CSC
T ss_pred             chh-hhhh--ccccceEEEeCCCcccHHHHHHHHHCCCcEEEecCccccCHHHHHHHHHHHHhcCceEE-Eec
Confidence            111 1222  24699999998888888889999999999877655432222  2345667777775533 543

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.16  E-value=0.00021  Score=61.73  Aligned_cols=41  Identities=15%  Similarity=0.289  Sum_probs=36.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLL  117 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL  117 (369)
                      |.||+|+||||.+|..-++++.+||+ |+|..|++.++..+-
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~-~ei~~l~s~~~aG~~   41 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPE-AKITYLSSRTYAGKK   41 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTT-EEEEEEECSTTTTSB
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCC-ceEEEeeccccCCCc
Confidence            57999999999999999999999995 999999987766443

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=97.16  E-value=0.00075  Score=55.47  Aligned_cols=111  Identities=14%  Similarity=0.214  Sum_probs=78.5

Q ss_pred             eeEEEEecCChHhHH-HHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQ-TLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtq-TLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .||+|+| +|++|.. -+..++++|+ |+|+|+.. .|.++..+.+++|..++.                          
T Consensus         2 iri~iIG-~G~~g~~~~~~~l~~~~~-~~i~~v~d-~~~~~~~~~~~~~~~~~~--------------------------   52 (164)
T d1tlta1           2 LRIGVVG-LGGIAQKAWLPVLAAASD-WTLQGAWS-PTRAKALPICESWRIPYA--------------------------   52 (164)
T ss_dssp             EEEEEEC-CSTHHHHTHHHHHHSCSS-EEEEEEEC-SSCTTHHHHHHHHTCCBC--------------------------
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHhCCC-cEEEEEEe-chhHhhhhhhhccccccc--------------------------
Confidence            4899999 6999986 6899998876 99999875 445555566666653321                          


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceee----ecccceeecccchhHHhhhcCCeEee
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIAL----ANKETLIAGGPFVLPLAHKHNIKILP  223 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaL----ANKEsLV~aG~li~~~a~k~~~~IlP  223 (369)
                        +.+.++.  +++|.|+.+..--.-..-+.+|+++||.|.+    |.-   +.-..-+.++++++|..+.-
T Consensus        53 --~~~~~l~--~~~D~V~I~tp~~~h~~~~~~al~~gk~V~~EKPla~~---~~e~~~l~~~a~~~~~~~~v  117 (164)
T d1tlta1          53 --DSLSSLA--ASCDAVFVHSSTASHFDVVSTLLNAGVHVCVDKPLAEN---LRDAERLVELAARKKLTLMV  117 (164)
T ss_dssp             --SSHHHHH--TTCSEEEECSCTTHHHHHHHHHHHTTCEEEEESSSCSS---HHHHHHHHHHHHHTTCCEEE
T ss_pred             --ccchhhh--hhcccccccccchhccccccccccccceeeccccccCC---HHHHHHHHHHHHHcCCcEEE
Confidence              1123344  3589999888777778889999999999863    321   12345577889999876653

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=97.07  E-value=0.00059  Score=58.25  Aligned_cols=53  Identities=19%  Similarity=0.312  Sum_probs=44.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec----CCHHHHHHHHHhhCCCEEEE
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG----SNITLLADQVKRFKPQVVAV  131 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag----~Nv~lL~eQ~~~FkP~~V~v  131 (369)
                      +||.|+|+||+||+..++-+.+.  .|+|+++.-.    .|.+.+.+..+.++|++|.=
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~--g~~Vi~~~r~~~D~~d~~~~~~~l~~~~~d~vih   58 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGK--NVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVIN   58 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTS--SEEEEEECTTTCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhC--CCEEEEeechhccCCCHHHHHHHHHHcCCCEEEe
Confidence            46999999999999999998764  7999998754    57788888888999998764

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.92  E-value=0.00051  Score=57.87  Aligned_cols=40  Identities=28%  Similarity=0.427  Sum_probs=31.8

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHH
Q 017567           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLL  117 (369)
Q Consensus        74 ~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL  117 (369)
                      +.+|||+|+|+||.||...++-+.+.  .|+|++++  +|.+++
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~--g~~V~~~~--R~~~~~   40 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQA--GYEVTVLV--RDSSRL   40 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEE--SCGGGS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEE--cChhhc
Confidence            36789999999999999999866654  68999986  454443

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.84  E-value=0.0024  Score=51.66  Aligned_cols=41  Identities=22%  Similarity=0.261  Sum_probs=33.6

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHH
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLL  117 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL  117 (369)
                      .+++|.|.|+||+||++.++-+.+...++.|++++  +|-+.+
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~--R~~~~~   42 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLV--RSAQGK   42 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEE--SCHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEc--CCHHHH
Confidence            57899999999999999999998877778888765  454443

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=96.75  E-value=0.0014  Score=55.82  Aligned_cols=51  Identities=25%  Similarity=0.371  Sum_probs=41.5

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC--------CHHHHHHHHHhhCCCEEEE
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS--------NITLLADQVKRFKPQVVAV  131 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~--------Nv~lL~eQ~~~FkP~~V~v  131 (369)
                      ||.|.|+||+||+...+-   ..+++.++++.-++        |.+.+.+.++.++|++|.=
T Consensus         2 KILItG~tGfiG~~l~~~---L~~~g~~v~~~~~~~~~~~Dl~~~~~~~~~i~~~~~D~Vih   60 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRS---LAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN   60 (298)
T ss_dssp             EEEEECTTSHHHHHHHHH---TTTTSEEEEECTTCSSSCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             EEEEECCCCHHHHHHHHH---HHhCCCEEEEECCCccccCcCCCHHHHHHHHHHcCCCEEEE
Confidence            599999999999987665   44567888887654        6788888899999998864

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.74  E-value=0.00047  Score=57.82  Aligned_cols=35  Identities=31%  Similarity=0.444  Sum_probs=31.1

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      +||||.|+|+||+||...++-+.+.++.++|.+++
T Consensus         1 t~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~   35 (212)
T d2a35a1           1 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPA   35 (212)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCB
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEe
Confidence            47999999999999999999988888877888765

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=96.67  E-value=0.0054  Score=50.83  Aligned_cols=97  Identities=15%  Similarity=0.218  Sum_probs=65.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .+|.|+|+ |.||..++.+.+..  .. +|++..  .|-+++ +.++++..+++.-..+....+..+.            
T Consensus        30 ~~VlV~Ga-G~iG~~~~~~ak~~--Ga~~Vi~~~--~~~~~~-~~a~~lGa~~vi~~~~~~~~~~~~~------------   91 (182)
T d1vj0a2          30 KTVVIQGA-GPLGLFGVVIARSL--GAENVIVIA--GSPNRL-KLAEEIGADLTLNRRETSVEERRKA------------   91 (182)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT--TBSEEEEEE--SCHHHH-HHHHHTTCSEEEETTTSCHHHHHHH------------
T ss_pred             CEEEEECC-Cccchhheeccccc--ccccccccc--cccccc-cccccccceEEEeccccchHHHHHH------------
Confidence            47999997 99999999999986  33 566654  455665 7889999988876655554443322            


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCce
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~i  195 (369)
                          +.++.....+|+|++++.+-..+.-.+.+++.|=++
T Consensus        92 ----i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~i  127 (182)
T d1vj0a2          92 ----IMDITHGRGADFILEATGDSRALLEGSELLRRGGFY  127 (182)
T ss_dssp             ----HHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEE
T ss_pred             ----HHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEE
Confidence                223333345899999975556666666666555443

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.64  E-value=0.00088  Score=56.04  Aligned_cols=37  Identities=19%  Similarity=0.382  Sum_probs=29.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCC--CceEEEEEeecC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHE--DKFRVVALAAGS  112 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~p--d~F~VvaLaag~  112 (369)
                      ||||+|+||||.+|+..++.+.+||  ..+++++++..+
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~   39 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ   39 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccc
Confidence            6899999999999999999766665  567777776543

>d1ebfa1 c.2.1.3 (A:2-150,A:341-359) Homoserine dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Homoserine dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.61  E-value=0.0019  Score=54.43  Aligned_cols=123  Identities=21%  Similarity=0.235  Sum_probs=73.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCc--eEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDK--FRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI  153 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~--F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v  153 (369)
                      +-+|+|+| .|.||++.++.+.++++.  ++|++++-.+..        .++++.+.+....   .+++.+....  ...
T Consensus         4 ~i~I~l~G-~G~VG~~l~~~l~~~~~~l~~~v~~i~~s~~~--------~~~~~g~~~~~~~---~~~~~~~~~~--~~~   69 (168)
T d1ebfa1           4 VVNVAVIG-AGVVGSAFLDQLLAMKSTITYNLVLLAEAERS--------LISKDFSPLNVGS---DWKAALAAST--TKT   69 (168)
T ss_dssp             EEEEEEEC-CSHHHHHHHHHHHHCCCSSEEEEEEEECSSBE--------EECSSCSCCSCTT---CHHHHHHTCC--CBC
T ss_pred             EEEEEEEe-CCHHHHHHHHHHHHhHHHhhhheEEEEEeeee--------eecccccchHhhh---hhhhhhhhcc--ccc
Confidence            34899996 799999999999988765  566666532210        1122222111111   1233332211  111


Q ss_pred             EecHHHHHH-HhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeecccchhHH
Q 017567          154 LAGEQGVIE-AARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPL  213 (369)
Q Consensus       154 ~~G~~gl~~-~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~  213 (369)
                      . ..+-+.+ +...+..|+++....|-....-..+|+++|+.|-.|||.-+...+....++
T Consensus        70 ~-~~~~~~~~~~~~~~~~vivd~t~~~~~~~~~~~aL~~G~hVVTANK~~la~~~~~~~~L  129 (168)
T d1ebfa1          70 L-PLDDLIAHLKTSPKPVILVDNTSSAYIAGFYTKFVENGISIATPNKKAFSSDLATWKAL  129 (168)
T ss_dssp             C-CHHHHHHHHTTCSSCEEEEECSCCHHHHTTHHHHHHTTCEEECCCCGGGSSCHHHHHHH
T ss_pred             c-cHHHHHHHhccCCCceEEEEecCChHHHHHHHHHHHcCCeEEecCcccccCCHHHHHHH
Confidence            1 1223333 445566888888887766555567899999999999997777666555444

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.58  E-value=0.0038  Score=51.43  Aligned_cols=77  Identities=14%  Similarity=0.169  Sum_probs=55.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchh-HHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL-LDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~-~~~l~~~l~~~~~~~~v~~  155 (369)
                      .+|.|.|++|.||..++.+.+..  .++|++++.  +-+++ +.++++..+.+.-..+.+ .+.+               
T Consensus        30 ~~VlV~Ga~G~vG~~aiq~a~~~--G~~vi~~~~--~~~~~-~~~~~~Ga~~vi~~~~~~~~~~i---------------   89 (174)
T d1yb5a2          30 ESVLVHGASGGVGLAACQIARAY--GLKILGTAG--TEEGQ-KIVLQNGAHEVFNHREVNYIDKI---------------   89 (174)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHT--TCEEEEEES--SHHHH-HHHHHTTCSEEEETTSTTHHHHH---------------
T ss_pred             CEEEEEecccccccccccccccc--Ccccccccc--ccccc-ccccccCcccccccccccHHHHh---------------
Confidence            47999999999999999999987  688988873  44554 778899988876543332 2222               


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccC
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVG  178 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG  178 (369)
                           .+...-..+|+|+++..|
T Consensus        90 -----~~~t~~~g~d~v~d~~g~  107 (174)
T d1yb5a2          90 -----KKYVGEKGIDIIIEMLAN  107 (174)
T ss_dssp             -----HHHHCTTCEEEEEESCHH
T ss_pred             -----hhhhccCCceEEeecccH
Confidence                 233334458999998654

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.55  E-value=0.001  Score=55.06  Aligned_cols=39  Identities=28%  Similarity=0.502  Sum_probs=32.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHh--CCCceEEEEEeecCCHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAE--HEDKFRVVALAAGSNIT  115 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~--~pd~F~VvaLaag~Nv~  115 (369)
                      |.+|+|+||||.+|...++++.+  || .|++..++..++..
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP-~~~l~~~~s~~~~G   42 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFP-LHRLHLLASAESAG   42 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCC-CSCEEEEECTTTTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCC-ceEEEEEeecccCC
Confidence            57899999999999999999974  55 48999888776654

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=96.53  E-value=0.0035  Score=51.44  Aligned_cols=113  Identities=16%  Similarity=0.182  Sum_probs=79.4

Q ss_pred             eeEEEEecCChHhHH-HHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQ-TLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtq-TLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .||+|+|+ |++|+. -+.+++++++ ++++  .+..|.+.+.+.+++|+...+. .                       
T Consensus         2 irvgiiG~-G~~~~~~~~~~l~~~~~-~~~~--~~d~~~~~~~~~~~~~~~~~~~-~-----------------------   53 (167)
T d1xeaa1           2 LKIAMIGL-GDIAQKAYLPVLAQWPD-IELV--LCTRNPKVLGTLATRYRVSATC-T-----------------------   53 (167)
T ss_dssp             EEEEEECC-CHHHHHTHHHHHTTSTT-EEEE--EECSCHHHHHHHHHHTTCCCCC-S-----------------------
T ss_pred             eEEEEEcC-CHHHHHHHHHHHHhCCC-cEEE--EEECCHHHHHHHHHhccccccc-c-----------------------
Confidence            37999995 899977 5899998876 7775  4678999998888888643221 1                       


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccc--eeecccchhHHhhhcCCeEe
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKET--LIAGGPFVLPLAHKHNIKIL  222 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEs--LV~aG~li~~~a~k~~~~Il  222 (369)
                         ...++.+ +++|.|+.+..-..-...+.+|+++||.|.+ =|=.  =..-..-+.++++++|..+.
T Consensus        54 ---~~~~ll~-~~iD~V~I~tp~~~H~~~~~~al~~gk~V~~-EKP~~~~~~e~~~l~~~a~~~~~~~~  117 (167)
T d1xeaa1          54 ---DYRDVLQ-YGVDAVMIHAATDVHSTLAAFFLHLGIPTFV-DKPLAASAQECENLYELAEKHHQPLY  117 (167)
T ss_dssp             ---STTGGGG-GCCSEEEECSCGGGHHHHHHHHHHTTCCEEE-ESCSCSSHHHHHHHHHHHHHTTCCEE
T ss_pred             ---cHHHhcc-cccceeccccccccccccccccccccccccc-CCCCcCCHHHHHHHHHHHHHcCCEEE
Confidence               1123443 4699999999888889999999999999864 1100  01123446677888886653

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=96.36  E-value=0.0015  Score=54.18  Aligned_cols=36  Identities=25%  Similarity=0.498  Sum_probs=30.9

Q ss_pred             eEEEEecCChHhHHHHHHHHhCC-CceEEEEEeecCC
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHE-DKFRVVALAAGSN  113 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~p-d~F~VvaLaag~N  113 (369)
                      ||+|+||||.+|...++++.+|| ..+++..++..++
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s   39 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARS   39 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGG
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCCCceEEEEeccccc
Confidence            79999999999999999999997 4677777776554

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=96.33  E-value=0.0038  Score=55.71  Aligned_cols=29  Identities=28%  Similarity=0.422  Sum_probs=26.4

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEE
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVAL  108 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaL  108 (369)
                      ||.|.|+||+||+..++-+.+.  .++|+++
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~--g~~V~~~   30 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQN--GHDVIIL   30 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHT--TCEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHC--cCEEEEE
Confidence            5999999999999999999876  5889987

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.28  E-value=0.016  Score=47.38  Aligned_cols=100  Identities=19%  Similarity=0.211  Sum_probs=72.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      .+|+|+|+ |.||..++.+++...-+ +|++.  ..|-++| +.+++|..+++...+++...+..+.+..          
T Consensus        28 d~VlI~G~-G~iG~~~~~~a~~~G~~-~Vi~~--d~~~~rl-~~a~~~Ga~~~~~~~~~~~~~~~~~~~~----------   92 (171)
T d1pl8a2          28 HKVLVCGA-GPIGMVTLLVAKAMGAA-QVVVT--DLSATRL-SKAKEIGADLVLQISKESPQEIARKVEG----------   92 (171)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCS-EEEEE--ESCHHHH-HHHHHTTCSEEEECSSCCHHHHHHHHHH----------
T ss_pred             CEEEEECC-CccHHHHHHHHHHcCCc-eEEec--cCCHHHH-HHHHHhCCcccccccccccccccccccc----------
Confidence            37999997 99999999999986322 56554  4666665 5789999999888777766555554321          


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeee
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALA  198 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLA  198 (369)
                             -.-..+|+|+++.-+-..+.-.+..++.|-++.+.
T Consensus        93 -------~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~  127 (171)
T d1pl8a2          93 -------QLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLV  127 (171)
T ss_dssp             -------HHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEEC
T ss_pred             -------cCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEE
Confidence                   12236899999977777788888888888776544

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=96.28  E-value=0.0045  Score=53.71  Aligned_cols=51  Identities=12%  Similarity=0.322  Sum_probs=38.3

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEee-----------------------c--CCHHHHHHHHHhhCCCEEE
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA-----------------------G--SNITLLADQVKRFKPQVVA  130 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa-----------------------g--~Nv~lL~eQ~~~FkP~~V~  130 (369)
                      ||.|.|+||+||+..++-+.+.  .++|+++--                       +  .|.+.|.+..+.++|++|.
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~--g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vi   77 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQ--GIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCF   77 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHC--cCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEE
Confidence            7999999999999999988765  688998731                       1  4456666666666676665

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=96.25  E-value=0.0038  Score=54.50  Aligned_cols=55  Identities=11%  Similarity=0.119  Sum_probs=44.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC-----CHHHHHHHHHhhCCCEEEEc
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS-----NITLLADQVKRFKPQVVAVR  132 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~-----Nv~lL~eQ~~~FkP~~V~v~  132 (369)
                      +|||.|.|+||+||+..++-+.+.  .+.++.+.-++     |.+.+.+..+..+|+.+...
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~--g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~   61 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQR--GDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLA   61 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTC--TTEEEECCCTTTCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHC--cCEEEEecCchhccccCHHHHHHHHhhcCCCEEEEc
Confidence            579999999999999999998875  46677765554     36777778888899988764

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=96.24  E-value=0.005  Score=54.38  Aligned_cols=53  Identities=21%  Similarity=0.242  Sum_probs=39.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC------------------------CHHHHHHHHHhhCCCEEEE
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS------------------------NITLLADQVKRFKPQVVAV  131 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~------------------------Nv~lL~eQ~~~FkP~~V~v  131 (369)
                      |||.|.|+||+||..+.+-+.+.  .++|.++.-..                        |.+.+.+..+.+.|++|+.
T Consensus         9 KkILVTG~tGfIGs~lv~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~   85 (356)
T d1rkxa_           9 KRVFVTGHTGFKGGWLSLWLQTM--GATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFH   85 (356)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhh
Confidence            78999999999999999999876  57888886422                        3455566666666666554

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.15  E-value=0.0058  Score=50.07  Aligned_cols=88  Identities=17%  Similarity=0.237  Sum_probs=60.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCch-hHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNES-LLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~-~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .+|.|.|++|.||..++.+.+..  .++|++.+.  +-+++ +.++++.++.+....+. ..+++++.            
T Consensus        27 ~~VlI~ga~g~vG~~~iqla~~~--g~~vi~~~~--~~~~~-~~l~~~Ga~~vi~~~~~~~~~~v~~~------------   89 (183)
T d1pqwa_          27 ERVLIHSATGGVGMAAVSIAKMI--GARIYTTAG--SDAKR-EMLSRLGVEYVGDSRSVDFADEILEL------------   89 (183)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHH--TCEEEEEES--SHHHH-HHHHTTCCSEEEETTCSTHHHHHHHH------------
T ss_pred             CEEEEECCCCCcccccchhhccc--cccceeeec--ccccc-cccccccccccccCCccCHHHHHHHH------------
Confidence            47999999999999999999987  688888774  44664 67899999988764433 33444432            


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHH
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIE  190 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~  190 (369)
                              ..-..+|+|++.+.| .-+...+.+++
T Consensus        90 --------t~~~g~d~v~d~~g~-~~~~~~~~~l~  115 (183)
T d1pqwa_          90 --------TDGYGVDVVLNSLAG-EAIQRGVQILA  115 (183)
T ss_dssp             --------TTTCCEEEEEECCCT-HHHHHHHHTEE
T ss_pred             --------hCCCCEEEEEecccc-hHHHHHHHHhc
Confidence                    223358888887654 33444444433

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=96.05  E-value=0.0048  Score=55.06  Aligned_cols=37  Identities=27%  Similarity=0.352  Sum_probs=31.6

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN  113 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~N  113 (369)
                      .+|+|+|+|+||+||....+.+.+.  .|+|++++=+.+
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~--G~~V~~l~R~~~   38 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAV--GHHVRAQVHSLK   38 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCSC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhC--CCeEEEEECCcc
Confidence            4689999999999999999999885  688999975433

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=95.92  E-value=0.0064  Score=50.97  Aligned_cols=96  Identities=13%  Similarity=0.147  Sum_probs=64.6

Q ss_pred             eEEEE-ecCChHhHHHHHHHHhCCCceEEEEEeec-CCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           78 PISVL-GSTGSIGTQTLDIVAEHEDKFRVVALAAG-SNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        78 kI~IL-GSTGSIGtqTLdVI~~~pd~F~VvaLaag-~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      ++.|. |++|.+|..++.+.+..  .++|++.+.+ .+.+.+.+.++++..+++...++....++.+..           
T Consensus        31 ~vli~~ga~g~vG~~aiqlAk~~--Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~~~~~~~~~~~~v-----------   97 (189)
T d1gu7a2          31 DWFIQNGGTSAVGKYASQIGKLL--NFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTI-----------   97 (189)
T ss_dssp             CEEEESCTTSHHHHHHHHHHHHH--TCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHH-----------
T ss_pred             EEEEEeCCCchHHHHHHHHHhhc--CCeEEEEEecccccchHHhhhhhccccEEEeccccchhHHHHHH-----------
Confidence            46665 99999999999999987  7899998754 578888999999999999876543332222211           


Q ss_pred             cHHHHHHHh--cCCCCCEEEEeccCccCcHHHHHHHHcC
Q 017567          156 GEQGVIEAA--RHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (369)
Q Consensus       156 G~~gl~~~~--~~~~~D~Vv~AIvG~aGL~pt~~Ai~~g  192 (369)
                           .++.  .-..+|+|++++.|-. +...+.+++.+
T Consensus        98 -----~~~~~~~g~~vdvv~D~vg~~~-~~~~~~~l~~~  130 (189)
T d1gu7a2          98 -----KEWIKQSGGEAKLALNCVGGKS-STGIARKLNNN  130 (189)
T ss_dssp             -----HHHHHHHTCCEEEEEESSCHHH-HHHHHHTSCTT
T ss_pred             -----HHHHhhccCCceEEEECCCcch-hhhhhhhhcCC
Confidence                 1111  2235899999864432 34444444443

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=95.90  E-value=0.013  Score=49.89  Aligned_cols=34  Identities=18%  Similarity=0.265  Sum_probs=29.1

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      .++||.|+||||+||+..++-+.+.  .++|++++=
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~--G~~V~~~~R   35 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISL--GHPTYVLFR   35 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEEC
Confidence            3568999999999999999988875  588999863

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.86  E-value=0.01  Score=52.25  Aligned_cols=32  Identities=19%  Similarity=0.375  Sum_probs=27.9

Q ss_pred             eeE-EEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           77 KPI-SVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        77 kkI-~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      ||| .|.|+||+||+...+-+.+.  .|+|+|+.-
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~--g~~V~~i~r   33 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEK--GYEVHGIVR   33 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEEC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHC--cCEEEEEEC
Confidence            689 69999999999999988775  799999863

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=95.83  E-value=0.039  Score=43.49  Aligned_cols=92  Identities=16%  Similarity=0.123  Sum_probs=62.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      |+|.|+|+ |-+|..+.+.+.++  .++|+  .+++|.+++.+.+.+|.-..+...+......+                
T Consensus         3 K~IliiGa-G~~G~~~a~~L~~~--g~~V~--v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~----------------   61 (182)
T d1e5qa1           3 KSVLMLGS-GFVTRPTLDVLTDS--GIKVT--VACRTLESAKKLSAGVQHSTPISLDVNDDAAL----------------   61 (182)
T ss_dssp             CEEEEECC-STTHHHHHHHHHTT--TCEEE--EEESCHHHHHHHHTTCTTEEEEECCTTCHHHH----------------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhC--CCEEE--EEECChHHHHHHHhcccccccccccccchhhh----------------
Confidence            78999998 99999999999887  56764  56899999999888887544443332222122                


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCce
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~i  195 (369)
                          .+...  ..|.++.+............+++.+..+
T Consensus        62 ----~~~i~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~   94 (182)
T d1e5qa1          62 ----DAEVA--KHDLVISLIPYTFHATVIKSAIRQKKHV   94 (182)
T ss_dssp             ----HHHHT--TSSEEEECSCGGGHHHHHHHHHHHTCEE
T ss_pred             ----Hhhhh--ccceeEeeccchhhhHHHHHHHhhccce
Confidence                22222  3677777776666655566666665554

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=95.82  E-value=0.084  Score=44.54  Aligned_cols=107  Identities=18%  Similarity=0.193  Sum_probs=69.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      |++|+|-| .|-||+..++.+..+|| ++|+++.-.+...... ...++.-+.. ...++....+++.      +.++- 
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~d-i~vvaInd~~~~~~~~-~l~~~~~~~~-~~~~~~~~~~~~~------~~~v~-   69 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDD-MKVIGVSKTRPDFEAR-MALKKGYDLY-VAIPERVKLFEKA------GIEVA-   69 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSS-EEEEEEEESSCSHHHH-HHHHTTCCEE-ESSGGGHHHHHHT------TCCCC-
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCC-ceEEEEecCCcHHHHH-HHHhcCCceE-ecccccceeeccc------CcccC-
Confidence            68999999 79999999999988875 9999998765433332 2334443333 3334444444432      12221 


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceee
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIAL  197 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaL  197 (369)
                      |  ...++.+  ++|+|+.+---+.+..-...-+++|++..+
T Consensus        70 g--~~~~~~~--~vDvViEcTG~f~~~~~~~~hl~~G~K~vi  107 (171)
T d1cf2o1          70 G--TVDDMLD--EADIVIDCTPEGIGAKNLKMYKEKGIKAIF  107 (171)
T ss_dssp             E--EHHHHHH--TCSEEEECCSTTHHHHHHHHHHHTTCEEEE
T ss_pred             C--ChhHhhc--CCCEEEEccCCCCCHHHHHHHHHcCCCEEE
Confidence            2  2334433  599999998777777777777888977554

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=95.82  E-value=0.0028  Score=53.30  Aligned_cols=34  Identities=21%  Similarity=0.287  Sum_probs=29.5

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      .+|||.|+|+||.||+..++-+.+.  .++|++++=
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~--G~~V~~l~R   35 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDL--GHPTFLLVR   35 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEEC
Confidence            4689999999999999999988765  589999873

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=95.69  E-value=0.011  Score=53.46  Aligned_cols=31  Identities=23%  Similarity=0.351  Sum_probs=26.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      |++.|.|+||+||+...+-+.+.  .++|+++.
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~--g~~V~~~~   32 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEK--GYEVHGIK   32 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC--cCEEEEEE
Confidence            55669999999999999999876  68998875

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.68  E-value=0.011  Score=52.63  Aligned_cols=30  Identities=30%  Similarity=0.443  Sum_probs=26.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEE
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVAL  108 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaL  108 (369)
                      |.|.|.|+||+||...++-+.+.  .++|+++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~--g~~V~~~   31 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIEN--GYDCVVA   31 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC--cCeEEEE
Confidence            56889999999999999888875  6889887

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=95.68  E-value=0.059  Score=45.89  Aligned_cols=106  Identities=16%  Similarity=0.186  Sum_probs=68.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      |-||+|-| .|-||+..++.+.++|| ++||++.-..--.......+.+. ..  ...+.....+.+.      ++.+. 
T Consensus         1 MIKVaING-fGRIGR~v~Ral~~~~d-ievVaInd~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~------~i~v~-   68 (178)
T d1b7go1           1 MVNVAVNG-YGTIGKRVADAIIKQPD-MKLVGVAKTSPNYEAFIAHRRGI-RI--YVPQQSIKKFEES------GIPVA-   68 (178)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTT-EEEEEEECSSCSHHHHHHHHTTC-CE--ECCGGGHHHHHTT------TCCCC-
T ss_pred             CeEEEEEC-CCHHHHHHHHHHHhCCC-CEEEEEECCCCcHHHHHhcccCc-ce--eccCccceecccc------ceecC-
Confidence            45899999 89999999999998865 99999976543333333333332 22  2233333333321      12221 


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceee
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIAL  197 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaL  197 (369)
                      |  .+.++.+  ++|+||.+--.+.+..-.-.-+++||++-+
T Consensus        69 g--~~~~~~~--~vDiViecTG~f~~~e~a~~hl~~G~KvIi  106 (178)
T d1b7go1          69 G--TVEDLIK--TSDIVVDTTPNGVGAQYKPIYLQLQRNAIF  106 (178)
T ss_dssp             C--CHHHHHH--HCSEEEECCSTTHHHHHHHHHHHTTCEEEE
T ss_pred             C--chhhhhh--cCCEEEECCCCcCCHHHHHHHHHcCCEEEE
Confidence            2  2334332  589999998888888877788889977655

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.67  E-value=0.011  Score=53.55  Aligned_cols=30  Identities=20%  Similarity=0.347  Sum_probs=26.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEE
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVAL  108 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaL  108 (369)
                      |||.|.|+||+||+...+-+.+.  .++|+++
T Consensus         2 ~kILVTGatGfiG~~lv~~Ll~~--g~~V~~i   31 (393)
T d1i24a_           2 SRVMVIGGDGYCGWATALHLSKK--NYEVCIV   31 (393)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHC--cCEEEEE
Confidence            57999999999999998888764  6889887

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.59  E-value=0.016  Score=50.30  Aligned_cols=32  Identities=31%  Similarity=0.426  Sum_probs=28.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      |+|.|.|+||+||...++.+.+.  .|+|.++.-
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~--g~~V~~~~r   32 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEK--GYRVHGLVA   32 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHC--cCEEEEEEC
Confidence            78999999999999999988765  699999864

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=95.56  E-value=0.0061  Score=51.06  Aligned_cols=37  Identities=16%  Similarity=0.277  Sum_probs=29.8

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCC--ceEEEEEeecCCH
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHED--KFRVVALAAGSNI  114 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd--~F~VvaLaag~Nv  114 (369)
                      ||+|+||||.+|+..++.+.+|++  .++++.++..+..
T Consensus         2 KVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~   40 (147)
T d1mb4a1           2 RVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIG   40 (147)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCS
T ss_pred             EEEEECCccHHHHHHHHHHHhcCCCCceEEEEecccccc
Confidence            699999999999999998765442  6888888766554

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.23  E-value=0.014  Score=51.77  Aligned_cols=30  Identities=27%  Similarity=0.408  Sum_probs=26.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEE
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVAL  108 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaL  108 (369)
                      |||.|.|+||+||+..++.+-+.  .++|+++
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~--g~~V~~l   32 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEA--GYLPVVI   32 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHT--TCCEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHC--cCEEEEE
Confidence            68999999999999999888765  5788887

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=95.15  E-value=0.074  Score=42.85  Aligned_cols=97  Identities=18%  Similarity=0.127  Sum_probs=65.2

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchh--HHHHHHHHhcCCCCceEEe
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL--LDEIKEALANVEEKPEILA  155 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~--~~~l~~~l~~~~~~~~v~~  155 (369)
                      +|.|+| +|.||..++.+.+..  ..+|+++.  .|-+++ +.++++..+.+.+.+...  ..+..+.+           
T Consensus        29 ~vlV~G-~G~vG~~~~~~ak~~--Ga~vi~v~--~~~~r~-~~a~~~ga~~~~~~~~~~~~~~~~~~~~-----------   91 (170)
T d1e3ja2          29 TVLVIG-AGPIGLVSVLAAKAY--GAFVVCTA--RSPRRL-EVAKNCGADVTLVVDPAKEEESSIIERI-----------   91 (170)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHT--TCEEEEEE--SCHHHH-HHHHHTTCSEEEECCTTTSCHHHHHHHH-----------
T ss_pred             EEEEEc-ccccchhhHhhHhhh--cccccccc--hHHHHH-HHHHHcCCcEEEeccccccccchhhhhh-----------
Confidence            699998 699999999999887  35788765  555665 788999998887755432  22222221           


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceee
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIAL  197 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaL  197 (369)
                           .+.. -..+|+|+++..+-..+.-.+..++.|=+|.+
T Consensus        92 -----~~~~-g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~  127 (170)
T d1e3ja2          92 -----RSAI-GDLPNVTIDCSGNEKCITIGINITRTGGTLML  127 (170)
T ss_dssp             -----HHHS-SSCCSEEEECSCCHHHHHHHHHHSCTTCEEEE
T ss_pred             -----hccc-ccCCceeeecCCChHHHHHHHHHHhcCCceEE
Confidence                 1111 23589999997665666767777666655443

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=95.13  E-value=0.071  Score=46.23  Aligned_cols=64  Identities=28%  Similarity=0.387  Sum_probs=49.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      -|.+.|.|+|+.||..+.+-+.+.  .++|+..  ++|.+++.+.++++..+...+ .|-+..+.+++.
T Consensus         5 gK~alItGas~GIG~aia~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~   69 (241)
T d2a4ka1           5 GKTILVTGAASGIGRAALDLFARE--GASLVAV--DREERLLAEAVAALEAEAIAVVADVSDPKAVEAV   69 (241)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHH
Confidence            368999999999999999988875  6888753  478899999999998876554 555555555544

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.12  E-value=0.0085  Score=51.10  Aligned_cols=35  Identities=23%  Similarity=0.328  Sum_probs=28.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      .|+|.|+||||+||+..++-+-+++.--+|.+++=
T Consensus        14 ~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R   48 (232)
T d2bkaa1          14 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGR   48 (232)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEES
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEec
Confidence            46899999999999999998877653237888763

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=94.92  E-value=0.038  Score=46.18  Aligned_cols=45  Identities=22%  Similarity=0.326  Sum_probs=34.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      -|+|.|.|+||.||..+-..+.++  ..+|+.  +++|.+++.+...++
T Consensus        23 gK~vlItGasgGIG~~ia~~la~~--G~~V~~--~~r~~~~~~~~~~~~   67 (191)
T d1luaa1          23 GKKAVVLAGTGPVGMRSAALLAGE--GAEVVL--CGRKLDKAQAAADSV   67 (191)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEE--EESSHHHHHHHHHHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHHhh--ccchhh--cccchHHHHHHHHHH
Confidence            378999999999999999999987  566654  456777776655544

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.80  E-value=0.037  Score=48.20  Aligned_cols=33  Identities=21%  Similarity=0.261  Sum_probs=28.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      +|++.|.|+||+||....+-+-+.  .|+|+|+.-
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~--g~~V~~~~r   33 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGK--GYEVHGLIR   33 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEEC
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHC--cCEEEEEEC
Confidence            478999999999999999988774  799999873

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.71  E-value=0.012  Score=52.04  Aligned_cols=32  Identities=22%  Similarity=0.341  Sum_probs=28.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      +|||.|.|+||+||+..++-+.+.  .++|+++.
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~--g~~V~~~d   32 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMD--GHEVTVVD   32 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEe
Confidence            489999999999999999888765  68999984

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=94.60  E-value=0.067  Score=46.11  Aligned_cols=86  Identities=10%  Similarity=0.131  Sum_probs=55.9

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEE-EcCchhHHHHHHHHhcCCCCceE
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVA-VRNESLLDEIKEALANVEEKPEI  153 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~-v~de~~~~~l~~~l~~~~~~~~v  153 (369)
                      .||.|.|.|+|+=||..+..-+.+....+.|++.  .+|.+++.++.++...+..+ ..|-.+.+.+++...        
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~--~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~--------   71 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIAT--ARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVS--------   71 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEE--ESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHH--------
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEE--eCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHH--------
Confidence            4689999999999999999998887666777764  47788887766555444333 344444444444321        


Q ss_pred             EecHHHHHHHhcCCCCCEEEEe
Q 017567          154 LAGEQGVIEAARHPDAVTVVTG  175 (369)
Q Consensus       154 ~~G~~gl~~~~~~~~~D~Vv~A  175 (369)
                           -+.+.......|++|+.
T Consensus        72 -----~i~~~~~~~~idilinn   88 (250)
T d1yo6a1          72 -----KVGEIVGSDGLSLLINN   88 (250)
T ss_dssp             -----HHHHHHGGGCCCEEEEC
T ss_pred             -----HHHHHhCCCCeEEEEEc
Confidence                 12233333458888876

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=94.56  E-value=0.14  Score=44.64  Aligned_cols=80  Identities=18%  Similarity=0.204  Sum_probs=57.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      |++.|.|+|+-||..+-.-+.+.  .++|+..  .+|.++|.+.++++.++...+ .|-.+.+.+++.+.          
T Consensus         6 K~alVTGas~GIG~aia~~la~~--Ga~V~~~--~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~----------   71 (256)
T d1k2wa_           6 KTALITGSARGIGRAFAEAYVRE--GARVAIA--DINLEAARATAAEIGPAACAIALDVTDQASIDRCVA----------   71 (256)
T ss_dssp             EEEEEETCSSHHHHHHHHHHHHT--TEEEEEE--ESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHH----------
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHH----------
Confidence            78999999999999999888876  6887654  478999999999998887664 44444445554331          


Q ss_pred             cHHHHHHHhcCCCCCEEEEe
Q 017567          156 GEQGVIEAARHPDAVTVVTG  175 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~A  175 (369)
                         .+.  .+...+|++||.
T Consensus        72 ---~~~--~~~g~iDilVnn   86 (256)
T d1k2wa_          72 ---ELL--DRWGSIDILVNN   86 (256)
T ss_dssp             ---HHH--HHHSCCCEEEEC
T ss_pred             ---HHH--HHhCCccEEEee
Confidence               111  122468999886

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.49  E-value=0.015  Score=51.46  Aligned_cols=33  Identities=30%  Similarity=0.456  Sum_probs=29.4

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      .||+|.|.|+||+||+..++.+.+.  .++|.++.
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~--g~~V~~~d   47 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKL--DQKVVGLD   47 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHC--cCEEEEEE
Confidence            5789999999999999999998876  68899985

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=94.43  E-value=0.032  Score=50.52  Aligned_cols=51  Identities=16%  Similarity=0.317  Sum_probs=37.6

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEE-EEEee-------------------------cCCHHHHHHHHHhhCCCEEE
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRV-VALAA-------------------------GSNITLLADQVKRFKPQVVA  130 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~V-vaLaa-------------------------g~Nv~lL~eQ~~~FkP~~V~  130 (369)
                      ||.|.|+||+||....+-+.++.  +++ +++--                         =.|.+.+.+..+.++|++|.
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g--~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vi   78 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNT--QDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVM   78 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHC--SCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCC--CCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEE
Confidence            69999999999999998887653  333 33310                         13667788888888888876

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=94.10  E-value=0.019  Score=51.10  Aligned_cols=34  Identities=29%  Similarity=0.364  Sum_probs=28.6

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEE
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVAL  108 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaL  108 (369)
                      .+|||.|.|+||+||+..++-+.++....+|+++
T Consensus         1 ~~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~   34 (346)
T d1oc2a_           1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVL   34 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred             CcCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEE
Confidence            3789999999999999999988776556677765

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.01  E-value=0.03  Score=49.84  Aligned_cols=40  Identities=20%  Similarity=0.272  Sum_probs=31.1

Q ss_pred             CCCCCC-eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC
Q 017567           71 KTWDGP-KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS  112 (369)
Q Consensus        71 ~~~~~~-kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~  112 (369)
                      +-|+.+ +||.|.|+||+||+..++-+.+.  .++|+++.-.+
T Consensus         9 ~~~~~~nMKILVTGgsGfIGs~lv~~L~~~--g~~V~~~d~~~   49 (363)
T d2c5aa1           9 QYWPSENLKISITGAGGFIASHIARRLKHE--GHYVIASDWKK   49 (363)
T ss_dssp             CSCTTSCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSC
T ss_pred             CcCCCCCCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEeCCC
Confidence            445443 46999999999999999988874  68999886443

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=93.69  E-value=0.12  Score=44.73  Aligned_cols=64  Identities=22%  Similarity=0.202  Sum_probs=44.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHH---HHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITL---LADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~l---L~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      |.+.|.|+|+-||..+-.-+.+.  .++|+ +.++++-++   +.+++++...+...+ .|-.+.+.+++.
T Consensus         7 K~alITGas~GIG~aia~~la~~--G~~Vv-i~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~   74 (259)
T d1ja9a_           7 KVALTTGAGRGIGRGIAIELGRR--GASVV-VNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVAL   74 (259)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHT--TCEEE-EEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHc--CCEEE-EEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHH
Confidence            57999999999999999888875  78886 566666554   455566666665544 555555555543

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=93.60  E-value=0.16  Score=44.34  Aligned_cols=64  Identities=17%  Similarity=0.050  Sum_probs=45.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCH---HHHHHHHHhhCCCEEE-EcCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNI---TLLADQVKRFKPQVVA-VRNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv---~lL~eQ~~~FkP~~V~-v~de~~~~~l~~~  143 (369)
                      -|++.|.|+|+.||..+..-+.+.  .++|+...  +|-   +++.++++++..+... ..|-.+.+++++.
T Consensus         6 gK~alITGas~GIG~aia~~la~~--G~~V~i~~--r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~   73 (258)
T d1ae1a_           6 GTTALVTGGSKGIGYAIVEELAGL--GARVYTCS--RNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKL   73 (258)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHH
Confidence            478999999999999999887775  67776644  344   4566677777776654 3666666666554

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=93.59  E-value=0.17  Score=40.79  Aligned_cols=77  Identities=10%  Similarity=0.095  Sum_probs=53.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCc-hhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNE-SLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de-~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      ++|.|.|++|.+|.-++.+.+..  ..+|++.+..  -+++ +.++++..+++.-..+ +..+++++             
T Consensus        30 ~~Vlv~ga~g~vG~~~iqlak~~--Ga~Vi~~~~s--~~k~-~~~~~lGa~~vi~~~~~d~~~~v~~-------------   91 (179)
T d1qora2          30 EQFLFHAAAGGVGLIACQWAKAL--GAKLIGTVGT--AQKA-QSALKAGAWQVINYREEDLVERLKE-------------   91 (179)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHH--TCEEEEEESS--HHHH-HHHHHHTCSEEEETTTSCHHHHHHH-------------
T ss_pred             CEEEEEccccccchHHHHHHHHh--CCeEeecccc--hHHH-HHHHhcCCeEEEECCCCCHHHHHHH-------------
Confidence            48999999999999999999986  5788887643  4444 5678888888765433 33334443             


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccC
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVG  178 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG  178 (369)
                             +..-..+|+|+++..|
T Consensus        92 -------~t~g~g~d~v~d~~g~  107 (179)
T d1qora2          92 -------ITGGKKVRVVYDSVGR  107 (179)
T ss_dssp             -------HTTTCCEEEEEECSCG
T ss_pred             -------HhCCCCeEEEEeCccH
Confidence                   2223458888888754

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=93.55  E-value=0.04  Score=44.60  Aligned_cols=94  Identities=17%  Similarity=0.173  Sum_probs=57.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchh-HHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL-LDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~-~~~l~~~l~~~~~~~~v~~  155 (369)
                      .+|.|.|++|.||..++.+++...- -+|++..  .|-++ .+.++++..+++.-.++.+ .++++              
T Consensus        29 ~~vlV~G~~G~vG~~~~~~~~~~g~-~~V~~~~--~~~~~-~~~~~~~Ga~~~i~~~~~~~~~~~~--------------   90 (170)
T d1jvba2          29 KTLLVVGAGGGLGTMAVQIAKAVSG-ATIIGVD--VREEA-VEAAKRAGADYVINASMQDPLAEIR--------------   90 (170)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTC-CEEEEEE--SSHHH-HHHHHHHTCSEEEETTTSCHHHHHH--------------
T ss_pred             CEEEEEeccccceeeeeeccccccc-ccccccc--cchhh-HHHHHHcCCceeeccCCcCHHHHHH--------------
Confidence            4799999999999999999997632 2455544  44454 4677888888776544332 22222              


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCc
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~  194 (369)
                            +......+|.|++...+-..+.-.+.+++.|-+
T Consensus        91 ------~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~  123 (170)
T d1jvba2          91 ------RITESKGVDAVIDLNNSEKTLSVYPKALAKQGK  123 (170)
T ss_dssp             ------HHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEE
T ss_pred             ------HHhhcccchhhhcccccchHHHhhhhhcccCCE
Confidence                  222233589999876554444433444444333

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=93.52  E-value=0.085  Score=47.33  Aligned_cols=32  Identities=22%  Similarity=0.334  Sum_probs=25.8

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEE
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVAL  108 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaL  108 (369)
                      .| ||.|.|+||+||+..++-+-++. .|+|+++
T Consensus         2 ~M-KVLITG~tGfIGs~lv~~LL~~~-~~~V~~~   33 (383)
T d1gy8a_           2 HM-RVLVCGGAGYIGSHFVRALLRDT-NHSVVIV   33 (383)
T ss_dssp             CC-EEEEETTTSHHHHHHHHHHHHHC-CCEEEEE
T ss_pred             cC-EEEEeCCCcHHHHHHHHHHHHhC-CCEEEEE
Confidence            35 79999999999999888765432 5899987

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.51  E-value=0.3  Score=42.16  Aligned_cols=80  Identities=19%  Similarity=0.160  Sum_probs=55.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      |++.|.|+++-||..+-.-+.+.  .++|+..  .+|-+.|.+.+++++--.....|-.+.+.+++.+.           
T Consensus         8 K~~lITGas~GIG~aia~~la~~--G~~V~~~--~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~-----------   72 (244)
T d1pr9a_           8 RRVLVTGAGKGIGRGTVQALHAT--GARVVAV--SRTQADLDSLVRECPGIEPVCVDLGDWEATERALG-----------   72 (244)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHT-----------
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHc--CCEEEEE--ECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHH-----------
Confidence            68999999999999998888875  6777664  47888998888887643444455544444443321           


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCcc
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCA  180 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~a  180 (369)
                              +....|++||. +|..
T Consensus        73 --------~~g~iDilVnn-Ag~~   87 (244)
T d1pr9a_          73 --------SVGPVDLLVNN-AAVA   87 (244)
T ss_dssp             --------TCCCCCEEEEC-CCCC
T ss_pred             --------HhCCceEEEec-cccc
Confidence                    22368999986 3443

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=93.40  E-value=0.077  Score=43.48  Aligned_cols=94  Identities=16%  Similarity=0.100  Sum_probs=58.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCc-hhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNE-SLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de-~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      .+|.|+|+ |.||..++.+++...  .+++..+. ++-++ .+.+++|....+.-.++ +..+++++             
T Consensus        30 ~~VlI~G~-G~iG~~~~~~ak~~g--~~~v~~~~-~~~~k-~~~a~~~Ga~~~i~~~~~~~~~~i~~-------------   91 (174)
T d1f8fa2          30 SSFVTWGA-GAVGLSALLAAKVCG--ASIIIAVD-IVESR-LELAKQLGATHVINSKTQDPVAAIKE-------------   91 (174)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHHT--CSEEEEEE-SCHHH-HHHHHHHTCSEEEETTTSCHHHHHHH-------------
T ss_pred             CEEEEeCC-CHHHhhhhhcccccc--cceeeeec-cHHHH-HHHHHHcCCeEEEeCCCcCHHHHHHH-------------
Confidence            37999998 999999999999873  33444333 34444 46789998877654333 22333333             


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCcee
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~ia  196 (369)
                             +.. ..+|.|+++.-+-..+.-++..++.+-++.
T Consensus        92 -------~t~-gg~D~vid~~G~~~~~~~~~~~~~~~G~i~  124 (174)
T d1f8fa2          92 -------ITD-GGVNFALESTGSPEILKQGVDALGILGKIA  124 (174)
T ss_dssp             -------HTT-SCEEEEEECSCCHHHHHHHHHTEEEEEEEE
T ss_pred             -------HcC-CCCcEEEEcCCcHHHHHHHHhcccCceEEE
Confidence                   222 258999998655556665555555544443

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.39  E-value=0.051  Score=45.84  Aligned_cols=93  Identities=19%  Similarity=0.316  Sum_probs=64.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      .+|.|.|++|-+|+.++.+.+..  .++|++.+...+-   .+.++++..+++.-.++..    .+.             
T Consensus        33 ~~VLI~gaaGGVG~~aiQlak~~--Ga~Viat~~s~~k---~~~~~~lGa~~vi~~~~~~----~~~-------------   90 (176)
T d1xa0a2          33 GPVLVTGATGGVGSLAVSMLAKR--GYTVEASTGKAAE---HDYLRVLGAKEVLAREDVM----AER-------------   90 (176)
T ss_dssp             CCEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCTTC---HHHHHHTTCSEEEECC-----------------------
T ss_pred             CEEEEEeccchHHHHHHHHHHHc--CCceEEecCchHH---HHHHHhcccceeeecchhH----HHH-------------
Confidence            47999999999999999999987  8899997765332   3456788888876433211    110             


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCcee
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~ia  196 (369)
                          .+......+|+|++.+. -.-+...+..++.|-++.
T Consensus        91 ----~~~~~~~gvD~vid~vg-g~~~~~~l~~l~~~Griv  125 (176)
T d1xa0a2          91 ----IRPLDKQRWAAAVDPVG-GRTLATVLSRMRYGGAVA  125 (176)
T ss_dssp             -------CCSCCEEEEEECST-TTTHHHHHHTEEEEEEEE
T ss_pred             ----HHHhhccCcCEEEEcCC-chhHHHHHHHhCCCceEE
Confidence                11123346999999864 446888888887776654

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=93.28  E-value=0.24  Score=42.80  Aligned_cols=86  Identities=15%  Similarity=0.118  Sum_probs=57.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      |.+.|.|+++-||..+-.-+.+.  .++|+..  .+|-+.|.+.+++++.+...+ .|-...+.+++.+.          
T Consensus         5 K~alITGas~GIG~a~a~~l~~~--G~~Vv~~--~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~----------   70 (243)
T d1q7ba_           5 KIALVTGASRGIGRAIAETLAAR--GAKVIGT--ATSENGAQAISDYLGANGKGLMLNVTDPASIESVLE----------   70 (243)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHT--TCEEEEE--ESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHH----------
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHc--CCEEEEE--eCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhh----------
Confidence            67889999999999999888875  7888653  478899998888887654433 44444444444331          


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCc
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGL  182 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL  182 (369)
                         .+.  .+....|++||. +|....
T Consensus        71 ---~~~--~~~g~iDilVnn-Ag~~~~   91 (243)
T d1q7ba_          71 ---KIR--AEFGEVDILVNN-AGITRD   91 (243)
T ss_dssp             ---HHH--HHTCSCSEEEEC-CCCCCC
T ss_pred             ---hhh--cccCCcceehhh-hhhccc
Confidence               111  223468888876 354433

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=93.25  E-value=0.099  Score=42.91  Aligned_cols=76  Identities=14%  Similarity=0.109  Sum_probs=54.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchh-HHHHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL-LDEIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~-~~~l~~~l~~~~~~~~v~~  155 (369)
                      .+|.|.|++|.+|..++.+.+..  ..+|++.+.  +-++ .+.++++..+.+...+++. .+..               
T Consensus        31 ~~VlV~ga~ggvG~~aiqlak~~--Ga~vi~~~~--~~~~-~~~~~~~Ga~~vi~~~~~~~~~~~---------------   90 (182)
T d1v3va2          31 ETVLVSAAAGAVGSVVGQIAKLK--GCKVVGAAG--SDEK-IAYLKQIGFDAAFNYKTVNSLEEA---------------   90 (182)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHT--TCEEEEEES--SHHH-HHHHHHTTCSEEEETTSCSCHHHH---------------
T ss_pred             CEEEEEeCCCchhHHHHHHHHcc--CCEEEEeCC--CHHH-HHHHHhhhhhhhcccccccHHHHH---------------
Confidence            47999999999999999999987  578998874  3344 4668888888887644332 2222               


Q ss_pred             cHHHHHHHhcCCCCCEEEEecc
Q 017567          156 GEQGVIEAARHPDAVTVVTGIV  177 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIv  177 (369)
                           .+......+|+|++.+-
T Consensus        91 -----~~~~~~~Gvd~v~D~vG  107 (182)
T d1v3va2          91 -----LKKASPDGYDCYFDNVG  107 (182)
T ss_dssp             -----HHHHCTTCEEEEEESSC
T ss_pred             -----HHHhhcCCCceeEEecC
Confidence                 22333446999999863

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=93.22  E-value=0.18  Score=44.29  Aligned_cols=63  Identities=17%  Similarity=0.292  Sum_probs=48.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      |.+.|.|+++-||..+-.-+.+.  .++|+..  .+|.+.|.+..+++..+...+ .|-...+.+++.
T Consensus         6 K~alITGas~GIG~aia~~la~~--Ga~V~i~--~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~   69 (276)
T d1bdba_           6 EAVLITGGASGLGRALVDRFVAE--GAKVAVL--DKSAERLAELETDHGDNVLGIVGDVRSLEDQKQA   69 (276)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHcCCCeeEEecccccHHHHHHH
Confidence            68999999999999999988886  6787764  478899999999997765544 455555555544

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.21  E-value=0.082  Score=41.01  Aligned_cols=43  Identities=16%  Similarity=0.185  Sum_probs=33.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~  123 (369)
                      +||+|+|.||.||+..-..+.++  .++|+..  ++|-+++.+...+
T Consensus         1 Mki~vigGaG~iG~alA~~la~~--G~~V~l~--~R~~e~~~~l~~~   43 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATL--GHEIVVG--SRREEKAEAKAAE   43 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTT--TCEEEEE--ESSHHHHHHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHH
Confidence            36999999999999999999986  7888754  4677766555443

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=93.21  E-value=0.069  Score=43.52  Aligned_cols=94  Identities=13%  Similarity=0.135  Sum_probs=60.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      .+|.|.|+ |.||..++.+++.+-- -.|++  ..+|-+++ +.++++..+++.-.+++..++..+              
T Consensus        34 ~~vli~Ga-G~vG~~~~~~a~~~g~-~~vv~--~~~~~~k~-~~~~~~ga~~~i~~~~~~~~~~~~--------------   94 (172)
T d1h2ba2          34 AYVAIVGV-GGLGHIAVQLLKVMTP-ATVIA--LDVKEEKL-KLAERLGADHVVDARRDPVKQVME--------------   94 (172)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCC-CEEEE--EESSHHHH-HHHHHTTCSEEEETTSCHHHHHHH--------------
T ss_pred             CEEEEeCC-ChHHHHHHHHHHhhcC-ccccc--ccchhHHH-HHHhhcccceeecCcccHHHHHHH--------------
Confidence            46889886 9999999999987522 23333  33455554 688899998887666554433332              


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCce
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~i  195 (369)
                            ......+|+|+++..+-..+...+.+++.|=++
T Consensus        95 ------~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~i  127 (172)
T d1h2ba2          95 ------LTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRL  127 (172)
T ss_dssp             ------HTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEE
T ss_pred             ------hhCCCCceEEEEecCcchHHHHHHHHHhCCCEE
Confidence                  222235899999877766666665555544433

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=93.15  E-value=0.23  Score=42.99  Aligned_cols=63  Identities=19%  Similarity=0.265  Sum_probs=48.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEAL  144 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l  144 (369)
                      |++.|.|+|+-||..+.+-+.+.  .++|+..  .+|-+.|.+.+++.+..++. .|-.+.+.+++.+
T Consensus         6 K~~lITGas~GIG~aia~~l~~~--G~~V~~~--~r~~~~l~~~~~~~~~~~~~-~Dv~~~~~v~~~~   68 (242)
T d1ulsa_           6 KAVLITGAAHGIGRATLELFAKE--GARLVAC--DIEEGPLREAAEAVGAHPVV-MDVADPASVERGF   68 (242)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHTTTCEEEE-CCTTCHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHcCCeEEE-EecCCHHHHHHHH
Confidence            78999999999999999998876  6777764  47889999999998876654 5655555555543

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=92.98  E-value=0.12  Score=41.91  Aligned_cols=86  Identities=15%  Similarity=0.181  Sum_probs=58.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      .+|.|+|+ |.||..++.+.+..  ..++++.....  +++ +.++++..+.+.-..+...   .               
T Consensus        32 ~~VlI~Ga-G~vG~~a~qlak~~--Ga~~i~~~~~~--~~~-~~a~~lGad~~i~~~~~~~---~---------------   87 (168)
T d1uufa2          32 KKVGVVGI-GGLGHMGIKLAHAM--GAHVVAFTTSE--AKR-EAAKALGADEVVNSRNADE---M---------------   87 (168)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESSG--GGH-HHHHHHTCSEEEETTCHHH---H---------------
T ss_pred             CEEEEecc-chHHHHHHHHhhcc--cccchhhccch--hHH-HHHhccCCcEEEECchhhH---H---------------
Confidence            47999996 99999999999987  67888765433  333 6788999988765433211   0               


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcC
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~g  192 (369)
                            ......+|.|+++..+-..+...+..++.|
T Consensus        88 ------~~~~~~~D~vid~~g~~~~~~~~~~~l~~~  117 (168)
T d1uufa2          88 ------AAHLKSFDFILNTVAAPHNLDDFTTLLKRD  117 (168)
T ss_dssp             ------HTTTTCEEEEEECCSSCCCHHHHHTTEEEE
T ss_pred             ------HHhcCCCceeeeeeecchhHHHHHHHHhcC
Confidence                  011125899999987766777666544443

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.91  E-value=0.42  Score=41.20  Aligned_cols=63  Identities=19%  Similarity=0.122  Sum_probs=45.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEA  143 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~  143 (369)
                      |++.|.|+++-||..+-.-+.+.  .++|+..  .+|-++|.+..+++.--.....|-.+.+.+++.
T Consensus         6 K~alITGas~GIG~aia~~la~~--Ga~V~~~--~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~   68 (242)
T d1cyda_           6 LRALVTGAGKGIGRDTVKALHAS--GAKVVAV--TRTNSDLVSLAKECPGIEPVCVDLGDWDATEKA   68 (242)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHH
Confidence            67999999999999999888875  6787764  367888888888875333334455554444443

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.87  E-value=0.25  Score=43.05  Aligned_cols=63  Identities=14%  Similarity=0.014  Sum_probs=46.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      |.+.|.|+|+-||..+-.-+.+.  .++|+..  .+|-+++.+.+++++.+...+ .|-.+.+.+++.
T Consensus         7 K~alITGas~GIG~aia~~la~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   70 (244)
T d1nffa_           7 KVALVSGGARGMGASHVRAMVAE--GAKVVFG--DILDEEGKAMAAELADAARYVHLDVTQPAQWKAA   70 (244)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHH
Confidence            67999999999999999888876  6887653  467899999999887655544 444444444443

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=92.84  E-value=0.22  Score=42.26  Aligned_cols=53  Identities=19%  Similarity=0.211  Sum_probs=37.4

Q ss_pred             CCeeEEEEecCCh--HhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEE
Q 017567           75 GPKPISVLGSTGS--IGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVA  130 (369)
Q Consensus        75 ~~kkI~ILGSTGS--IGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~  130 (369)
                      .-|++.|.|++||  ||..+-+-+.+.  ..+|+ |+..++.++..+..+++..+...
T Consensus         5 ~gK~~lItGaag~~GIG~aiA~~la~~--Ga~Vi-l~~~~~~~~~~~~~~~~~~~~~~   59 (268)
T d2h7ma1           5 DGKRILVSGIITDSSIAFHIARVAQEQ--GAQLV-LTGFDRLRLIQRITDRLPAKAPL   59 (268)
T ss_dssp             TTCEEEECCCSSTTCHHHHHHHHHHHT--TCEEE-EEECSCHHHHHHHHTTSSSCCCE
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHc--CCEEE-EEeCChHHHHHHHHHHcCCceee
Confidence            3478999999876  999988777776  67764 56666655555566666655443

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=92.67  E-value=0.27  Score=42.04  Aligned_cols=83  Identities=10%  Similarity=0.139  Sum_probs=49.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhC-CCceEEEEEeec-CCHHHHHHHHHhhCCCEEEE-c---CchhHHHHHHHHhcCCC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEH-EDKFRVVALAAG-SNITLLADQVKRFKPQVVAV-R---NESLLDEIKEALANVEE  149 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~-pd~F~VvaLaag-~Nv~lL~eQ~~~FkP~~V~v-~---de~~~~~l~~~l~~~~~  149 (369)
                      ||+|.|.|||+=||..+-+.+.+. ...++|+..+-+ .+.+.+.+..++ .++...+ .   |++..+++-+.      
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dvs~~~~v~~~~~~------   74 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN-HSNIHILEIDLRNFDAYDKLVAD------   74 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHH-CTTEEEEECCTTCGGGHHHHHHH------
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhc-CCcEEEEEEEeccHHHHHHHHhh------
Confidence            689999999999999998877553 456888765422 233445444443 4454443 3   33333333222      


Q ss_pred             CceEEecHHHHHHHhcCCCCCEEEEe
Q 017567          150 KPEILAGEQGVIEAARHPDAVTVVTG  175 (369)
Q Consensus       150 ~~~v~~G~~gl~~~~~~~~~D~Vv~A  175 (369)
                                +.++......|++||-
T Consensus        75 ----------i~~~~~~~~iDiLvnN   90 (248)
T d1snya_          75 ----------IEGVTKDQGLNVLFNN   90 (248)
T ss_dssp             ----------HHHHHGGGCCSEEEEC
T ss_pred             ----------hHHHhhcCCcceEEee
Confidence                      2233344568888876

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.65  E-value=0.14  Score=42.52  Aligned_cols=79  Identities=13%  Similarity=0.012  Sum_probs=53.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      +.|.|.|++|.||+.++.+.+..--+  ++..++ ++-++..+.++++..++|.-..++...+                 
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~Ga~--~vi~~~-~~~e~~~~l~~~~gad~vi~~~~~~~~~-----------------   91 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLGCS--RVVGIC-GTQEKCLFLTSELGFDAAVNYKTGNVAE-----------------   91 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTTCS--EEEEEE-SSHHHHHHHHHHSCCSEEEETTSSCHHH-----------------
T ss_pred             CEEEEECCCchhhHHHHHHHHHcCCc--ceeccc-chHHHHhhhhhcccceEEeeccchhHHH-----------------
Confidence            47999999999999999999987332  333233 3457777788999998887655443322                 


Q ss_pred             HHHHHHHhcCCCCCEEEEeccC
Q 017567          157 EQGVIEAARHPDAVTVVTGIVG  178 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG  178 (369)
                        -+.+.. ...+|+|++.+-|
T Consensus        92 --~~~~~~-~~GvDvv~D~vGg  110 (187)
T d1vj1a2          92 --QLREAC-PGGVDVYFDNVGG  110 (187)
T ss_dssp             --HHHHHC-TTCEEEEEESSCH
T ss_pred             --HHHHHh-ccCceEEEecCCc
Confidence              122233 2458899888743

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=92.63  E-value=0.3  Score=42.76  Aligned_cols=63  Identities=11%  Similarity=0.094  Sum_probs=47.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      |.+.|.|+|+-||..+..-+.+.  .++|+..  .+|-++|.+.++++..+...+ .|-...+.+++.
T Consensus         6 K~alVTGas~GIG~aia~~la~~--Ga~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   69 (254)
T d1hdca_           6 KTVIITGGARGLGAEAARQAVAA--GARVVLA--DVLDEEGAATARELGDAARYQHLDVTIEEDWQRV   69 (254)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHH
T ss_pred             CEEEEeCcCCHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHH
Confidence            68999999999999999988876  6787543  367899999999997665443 444444444443

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=92.58  E-value=0.17  Score=41.72  Aligned_cols=93  Identities=15%  Similarity=0.208  Sum_probs=60.0

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCch-hHHHHHHHHhcCCCCceEEec
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNES-LLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~-~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      +|+|.|+ |-||..++.+.+..- -.+|++..  +|-++ .+.++++..+++.-..++ ..+.+++              
T Consensus        30 ~VlI~Ga-G~vGl~~~q~ak~~G-a~~Vi~~d--~~~~r-~~~a~~lGa~~~i~~~~~~~~~~v~~--------------   90 (174)
T d1jqba2          30 SVVVIGI-GAVGLMGIAGAKLRG-AGRIIGVG--SRPIC-VEAAKFYGATDILNYKNGHIEDQVMK--------------   90 (174)
T ss_dssp             CEEEECC-SHHHHHHHHHHHTTT-CSCEEEEC--CCHHH-HHHHHHHTCSEEECGGGSCHHHHHHH--------------
T ss_pred             EEEEEcC-Ccchhhhhhhhhccc-cccccccc--chhhh-HHHHHhhCccccccccchhHHHHHHH--------------
Confidence            7999997 999999999999752 12455443  45555 467889998877644332 2222332              


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCce
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~i  195 (369)
                            +.....+|+|+++.-+...+.-.+.+++.+-++
T Consensus        91 ------~t~g~G~D~vid~~g~~~~~~~a~~~~~~~G~i  123 (174)
T d1jqba2          91 ------LTNGKGVDRVIMAGGGSETLSQAVKMVKPGGII  123 (174)
T ss_dssp             ------HTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEE
T ss_pred             ------HhhccCcceEEEccCCHHHHHHHHHHHhcCCEE
Confidence                  222234899999976666666666666554443

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=92.51  E-value=0.068  Score=39.99  Aligned_cols=41  Identities=24%  Similarity=0.470  Sum_probs=34.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec-CCHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-SNITLLAD  119 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag-~Nv~lL~e  119 (369)
                      .+|.|.|+||.+|..++++.+..  .++|++.++. +|.+.+.+
T Consensus        33 ~~vlI~gasGgVG~~aiQlak~~--G~~Vi~~t~s~~k~~~~~~   74 (77)
T d1o8ca2          33 GEIVVTGASGGVGSTAVALLHKL--GYQVVAVSGRESTHEYLKS   74 (77)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCGGGHHHHHH
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHc--CCeEEEEECCHHHHHHHHH
Confidence            47999999999999999999987  7899999875 46666644

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=92.51  E-value=0.052  Score=48.24  Aligned_cols=32  Identities=22%  Similarity=0.419  Sum_probs=27.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (369)
                      -|+|.|.|+||+||+..++-+-++  .|+|+++.
T Consensus        11 gk~VlVTG~sGfIGs~l~~~Ll~~--G~~V~~~v   42 (342)
T d1y1pa1          11 GSLVLVTGANGFVASHVVEQLLEH--GYKVRGTA   42 (342)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE
T ss_pred             cCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEe
Confidence            368999999999999999877665  69999875

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=92.46  E-value=0.28  Score=42.62  Aligned_cols=82  Identities=13%  Similarity=0.165  Sum_probs=54.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCH---HHHHHHHHhhCCCEEEE-cCchhHHHHHHHHhcCCCCce
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNI---TLLADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPE  152 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv---~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~l~~~~~~~~  152 (369)
                      |++.|.|+|+-||..+-.-+.+.  .++|+... .++-   +.+.+++++...+..++ .|-.+.+.+++.+.       
T Consensus        19 K~~lITGas~GIG~aia~~la~~--Ga~Vvi~~-~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~-------   88 (272)
T d1g0oa_          19 KVALVTGAGRGIGREMAMELGRR--GCKVIVNY-ANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFE-------   88 (272)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHT--TCEEEEEE-SSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH-------
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEe-CCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHH-------
Confidence            68999999999999999998886  67776544 4444   45556666666666665 45555555555432       


Q ss_pred             EEecHHHHHHHhcCCCCCEEEEec
Q 017567          153 ILAGEQGVIEAARHPDAVTVVTGI  176 (369)
Q Consensus       153 v~~G~~gl~~~~~~~~~D~Vv~AI  176 (369)
                            -+.+..  ...|++|+..
T Consensus        89 ------~~~~~~--g~idilV~na  104 (272)
T d1g0oa_          89 ------EAVKIF--GKLDIVCSNS  104 (272)
T ss_dssp             ------HHHHHH--SCCCEEEECC
T ss_pred             ------HHHHHh--CCCCcccccc
Confidence                  112222  3578888875

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=92.42  E-value=0.085  Score=43.28  Aligned_cols=50  Identities=18%  Similarity=0.256  Sum_probs=38.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV  131 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v  131 (369)
                      ++|.|.|++|.||..++.+.+..  ..+|++.+.+.  ++ .+.++++..+++.-
T Consensus        29 ~~VlI~ga~G~vG~~aiqlak~~--G~~vi~~~~~~--~~-~~~~~~lGa~~~i~   78 (171)
T d1iz0a2          29 EKVLVQAAAGALGTAAVQVARAM--GLRVLAAASRP--EK-LALPLALGAEEAAT   78 (171)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSG--GG-SHHHHHTTCSEEEE
T ss_pred             CEEEEEeccccchhhhhhhhccc--ccccccccccc--cc-cccccccccceeee
Confidence            47999999999999999999987  46888876532  22 24567788887764

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.40  E-value=0.41  Score=41.66  Aligned_cols=65  Identities=17%  Similarity=0.154  Sum_probs=47.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEAL  144 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l  144 (369)
                      -|.+.|.|+|+-||..+-.-+.+.  .++|+..  .+|-+.|.+..++..-......|-.+.+.+++..
T Consensus         6 GK~alITGas~GIG~aia~~la~~--Ga~V~i~--~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~   70 (250)
T d1ydea1           6 GKVVVVTGGGRGIGAGIVRAFVNS--GARVVIC--DKDESGGRALEQELPGAVFILCDVTQEDDVKTLV   70 (250)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHH
Confidence            367999999999999999888875  6777764  4788888888888754344446655655565543

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.38  E-value=0.53  Score=40.84  Aligned_cols=86  Identities=26%  Similarity=0.233  Sum_probs=55.4

Q ss_pred             cCCCCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHH---HHHHHhhCCCEEE-EcCchhHHHHHHHHh
Q 017567           70 RKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLL---ADQVKRFKPQVVA-VRNESLLDEIKEALA  145 (369)
Q Consensus        70 ~~~~~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL---~eQ~~~FkP~~V~-v~de~~~~~l~~~l~  145 (369)
                      ||+..| |.+.|.|+|+-||..+-.-+.+.  .++|+.+  .+|.++|   +++++...++... ..|-.+.+.+++.+.
T Consensus         2 ~~~l~G-kv~lITGas~GIG~~ia~~la~~--G~~V~l~--~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~   76 (244)
T d1yb1a_           2 RKSVTG-EIVLITGAGHGIGRLTAYEFAKL--KSKLVLW--DINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAK   76 (244)
T ss_dssp             CCCCTT-CEEEEETTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCC-CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHH
Confidence            456666 56888899999999999988876  6776663  3466554   4555566666444 355555555555432


Q ss_pred             cCCCCceEEecHHHHHHHhcCCCCCEEEEe
Q 017567          146 NVEEKPEILAGEQGVIEAARHPDAVTVVTG  175 (369)
Q Consensus       146 ~~~~~~~v~~G~~gl~~~~~~~~~D~Vv~A  175 (369)
                      .             +  ..+...+|++|+.
T Consensus        77 ~-------------i--~~~~g~idilinn   91 (244)
T d1yb1a_          77 K-------------V--KAEIGDVSILVNN   91 (244)
T ss_dssp             H-------------H--HHHTCCCSEEEEC
T ss_pred             H-------------H--HHHcCCCceeEee
Confidence            1             1  1234568888876

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=91.70  E-value=0.45  Score=41.29  Aligned_cols=63  Identities=13%  Similarity=0.079  Sum_probs=47.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKE  142 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~  142 (369)
                      -|.+.|.|+++-||..+-.-+.+.  .++|+..  .+|-+.|.+.++++..+...+ .|-.+.+.+++
T Consensus         6 gK~alITGas~GIG~aia~~la~~--Ga~V~~~--~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~   69 (253)
T d1hxha_           6 GKVALVTGGASGVGLEVVKLLLGE--GAKVAFS--DINEAAGQQLAAELGERSMFVRHDVSSEADWTL   69 (253)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEE--CSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHH
Confidence            368999999999999999988875  6777643  468899999999998777665 34344444444

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=91.62  E-value=0.71  Score=39.99  Aligned_cols=81  Identities=11%  Similarity=0.129  Sum_probs=51.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH----hhCCCEEEE-cCchhHHHHHHHHhcCCCCc
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK----RFKPQVVAV-RNESLLDEIKEALANVEEKP  151 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~----~FkP~~V~v-~de~~~~~l~~~l~~~~~~~  151 (369)
                      |.+.|.|+||-||..+-.-+.+.  .++|+..  ++|-+++.+.++    ++..+..++ .|-...+.+++....     
T Consensus        26 K~alITGas~GIG~aiA~~la~~--Ga~Vii~--~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~-----   96 (294)
T d1w6ua_          26 KVAFITGGGTGLGKGMTTLLSSL--GAQCVIA--SRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSE-----   96 (294)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHH-----
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHc--CCEEEEE--ECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhh-----
Confidence            68999999999999999888875  6888764  356665554443    444554444 454444444443210     


Q ss_pred             eEEecHHHHHHHhcCCCCCEEEEec
Q 017567          152 EILAGEQGVIEAARHPDAVTVVTGI  176 (369)
Q Consensus       152 ~v~~G~~gl~~~~~~~~~D~Vv~AI  176 (369)
                                ........|++|+..
T Consensus        97 ----------~~~~~g~iDilvnnA  111 (294)
T d1w6ua_          97 ----------LIKVAGHPNIVINNA  111 (294)
T ss_dssp             ----------HHHHTCSCSEEEECC
T ss_pred             ----------hhhhccccchhhhhh
Confidence                      112334688888763

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=91.24  E-value=0.096  Score=45.88  Aligned_cols=32  Identities=22%  Similarity=0.449  Sum_probs=26.4

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (369)
                      ||.|.|+||+||+..++-+.+.. .++|++|.-
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g-~~~V~~ld~   33 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLRED-HYEVYGLDI   33 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHST-TCEEEEEES
T ss_pred             EEEEECCCcHHHHHHHHHHHHCC-CCEEEEEeC
Confidence            69999999999999988776543 578999854

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=91.05  E-value=1.3  Score=36.93  Aligned_cols=106  Identities=19%  Similarity=0.243  Sum_probs=68.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      .||+|-| .|=||+..++.+.++|| ++||++.-.+.-+... ...++.-+... .+++....+.+.  +    ..+ .|
T Consensus         3 irIaING-fGRIGR~v~Ral~~~~d-ieiVaINd~~~~~~~~-~l~~~~~~~~~-~~~~~~~~~~~~--~----~~~-~~   71 (172)
T d2czca2           3 VKVGVNG-YGTIGKRVAYAVTKQDD-MELIGITKTKPDFEAY-RAKELGIPVYA-ASEEFIPRFEKE--G----FEV-AG   71 (172)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCTT-EEEEEEEESSCSHHHH-HHHHTTCCEEE-SSGGGHHHHHHH--T----CCC-SC
T ss_pred             EEEEEEC-CCHHHHHHHHHHHhCCC-ceEEEEecCCChHHHH-HhhhcCceeec-ccccceeeeccc--C----ccc-cc
Confidence            4899999 59999999999988764 9999998765544333 34444323333 344444444432  1    111 11


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceee
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIAL  197 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaL  197 (369)
                        .+.++.  .++|+|+.+--.+-..+-.-.-+++|++.-+
T Consensus        72 --~~~~~~--~~vDvViEcTG~f~~~~~~~~hl~~G~k~Vi  108 (172)
T d2czca2          72 --TLNDLL--EKVDIIVDATPGGIGAKNKPLYEKAGVKAIF  108 (172)
T ss_dssp             --BHHHHH--TTCSEEEECCSTTHHHHHHHHHHHHTCEEEE
T ss_pred             --hhhhhh--ccCCEEEECCCCCCCHHHHHHHHHcCCCEEE
Confidence              244443  3699999997777777777777889966444

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=90.99  E-value=0.24  Score=41.65  Aligned_cols=56  Identities=20%  Similarity=0.265  Sum_probs=39.0

Q ss_pred             cccCCCCCCeeEEEEecCChHhHHHHHHHHhC-----CCceEEEEEeecCCHHHHHHHHHh
Q 017567           68 TFRKTWDGPKPISVLGSTGSIGTQTLDIVAEH-----EDKFRVVALAAGSNITLLADQVKR  123 (369)
Q Consensus        68 ~~~~~~~~~kkI~ILGSTGSIGtqTLdVI~~~-----pd~F~VvaLaag~Nv~lL~eQ~~~  123 (369)
                      +..++|..+.||+|.||+|.||.+.+=-+.+-     .....+.-+--..+.+.|..++.+
T Consensus        16 ~~~~~~k~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~md   76 (175)
T d7mdha1          16 DKTKSWKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAME   76 (175)
T ss_dssp             -----CCCCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHH
T ss_pred             hhhhccCCCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhh
Confidence            34588888889999999999999988776652     344566666667777777766654

>d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Biliverdin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.85  E-value=0.069  Score=43.60  Aligned_cols=126  Identities=11%  Similarity=0.099  Sum_probs=78.4

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCC--CceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCc
Q 017567           74 DGPKPISVLGSTGSIGTQTLDIVAEHE--DKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKP  151 (369)
Q Consensus        74 ~~~kkI~ILGSTGSIGtqTLdVI~~~p--d~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~  151 (369)
                      ..+.+|+|+|+ |.+|..-+..+.+.+  +.+.+++....+          ++..    .                 ...
T Consensus         5 ~~k~kv~iIG~-G~~g~~h~~~l~~~~~~~~~~~~~~~~~~----------~~~~----~-----------------~~~   52 (172)
T d1lc0a1           5 SGKFGVVVVGV-GRAGSVRLRDLKDPRSAAFLNLIGFVSRR----------ELGS----L-----------------DEV   52 (172)
T ss_dssp             CCSEEEEEECC-SHHHHHHHHHHTSHHHHTTEEEEEEECSS----------CCCE----E-----------------TTE
T ss_pred             CCCcEEEEEcC-CHHHHHHHHHHHhCCCCcEEEEEeccchH----------HHHH----h-----------------hcc
Confidence            34568999996 999999888888764  334444433211          0000    0                 001


Q ss_pred             eEEecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccc--eeecccchhHHhhhcCCeEee-----c
Q 017567          152 EILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKET--LIAGGPFVLPLAHKHNIKILP-----A  224 (369)
Q Consensus       152 ~v~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEs--LV~aG~li~~~a~k~~~~IlP-----V  224 (369)
                      ..    ..+.++.+.+++|.|+.+..--.-..-+..|+++||.|.+ -|=.  =+.-+.-+.++++++|..+.-     -
T Consensus        53 ~~----~~~~e~l~~~~iD~V~I~tp~~~H~~~~~~al~~gk~V~~-EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~  127 (172)
T d1lc0a1          53 RQ----ISLEDALRSQEIDVAYICSESSSHEDYIRQFLQAGKHVLV-EYPMTLSFAAAQELWELAAQKGRVLHEEHVELL  127 (172)
T ss_dssp             EB----CCHHHHHHCSSEEEEEECSCGGGHHHHHHHHHHTTCEEEE-ESCSCSCHHHHHHHHHHHHHTTCCEEEECGGGG
T ss_pred             Cc----CCHHHHHhCCCcchhhhcccccccccccccccccchhhhc-CCCccccHHHHHHHHHHHHHcCCeEEEecHHHh
Confidence            11    1356777778899999988887778889999999999753 2211  123345567888888865432     2


Q ss_pred             ccchhhHHHhhc
Q 017567          225 DSEHSAIFQCIQ  236 (369)
Q Consensus       225 DSEHsAIfQ~L~  236 (369)
                      +..+..+.+.+.
T Consensus       128 ~p~~~~~k~~i~  139 (172)
T d1lc0a1         128 KNIFLKDQDIFV  139 (172)
T ss_dssp             TTHHHHHHHHHH
T ss_pred             hHHHHHHHHHHH
Confidence            444555555554

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=90.84  E-value=0.49  Score=38.54  Aligned_cols=83  Identities=18%  Similarity=0.293  Sum_probs=46.6

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEecH
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGE  157 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G~  157 (369)
                      ||+|+|+||.||.+..-.+...+---+++-+--..+.+++.-++.                +|...........++..+.
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~----------------Dl~~~~~~~~~~~~~~~~~   65 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLRE----------------DIYDALAGTRSDANIYVES   65 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHH----------------HHHHHHTTSCCCCEEEEEE
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccc----------------cchhcccccccCCccccCC
Confidence            699999999999988777776653335554444445554433332                2333322223334554433


Q ss_pred             HHHHHHhcCCCCCEEEEeccCc
Q 017567          158 QGVIEAARHPDAVTVVTGIVGC  179 (369)
Q Consensus       158 ~gl~~~~~~~~~D~Vv~AIvG~  179 (369)
                      ..-.+  ...++|+||.+ +|.
T Consensus        66 ~~d~~--~l~~aDvVVit-AG~   84 (145)
T d1hyea1          66 DENLR--IIDESDVVIIT-SGV   84 (145)
T ss_dssp             TTCGG--GGTTCSEEEEC-CSC
T ss_pred             cchHH--HhccceEEEEe-ccc
Confidence            22222  23369999986 454

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=90.71  E-value=0.16  Score=40.42  Aligned_cols=94  Identities=17%  Similarity=0.203  Sum_probs=59.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHH-HHHHHHhcCCCCceEEe
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLD-EIKEALANVEEKPEILA  155 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~-~l~~~l~~~~~~~~v~~  155 (369)
                      .+|+|.|+ |+||..++.+.+.+.  .+|++..  .|-+++ +.++++.++.+....+.... .+++             
T Consensus        29 ~~vlv~G~-G~iG~~a~~~a~~~g--~~v~~~~--~~~~r~-~~~k~~Ga~~~~~~~~~~~~~~~~~-------------   89 (168)
T d1rjwa2          29 EWVAIYGI-GGLGHVAVQYAKAMG--LNVVAVD--IGDEKL-ELAKELGADLVVNPLKEDAAKFMKE-------------   89 (168)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTT--CEEEEEC--SCHHHH-HHHHHTTCSEEECTTTSCHHHHHHH-------------
T ss_pred             CEEEEeec-ccchhhhhHHHhcCC--CeEeccC--CCHHHh-hhhhhcCcceecccccchhhhhccc-------------
Confidence            47888886 999999999999873  4666644  455665 57899999888765443322 2222             


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeee
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALA  198 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLA  198 (369)
                             ..  .+.|.+|...+|-..+...+.+++.|-++.+.
T Consensus        90 -------~~--~~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~  123 (168)
T d1rjwa2          90 -------KV--GGVHAAVVTAVSKPAFQSAYNSIRRGGACVLV  123 (168)
T ss_dssp             -------HH--SSEEEEEESSCCHHHHHHHHHHEEEEEEEEEC
T ss_pred             -------cc--CCCceEEeecCCHHHHHHHHHHhccCCceEec
Confidence                   12  12344444445556677777776666555543

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=90.69  E-value=0.55  Score=39.90  Aligned_cols=71  Identities=17%  Similarity=0.268  Sum_probs=45.6

Q ss_pred             CCCCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC-----CHHHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           71 KTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS-----NITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        71 ~~~~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~-----Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      ..|...+.+.|.|+||-||..+.+-+.++-  .+.+.|++++     ..+.+.++++...++...+ .|-.+.+.+++.
T Consensus         4 ~~~~p~gt~lVTGgs~GIG~a~a~~la~~G--a~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~   80 (259)
T d2fr1a1           4 DEWKPTGTVLVTGGTGGVGGQIARWLARRG--APHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVREL   80 (259)
T ss_dssp             CCCCCCSEEEEETTTSHHHHHHHHHHHHHT--CSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             cccCCcCEEEEECCCcHHHHHHHHHHHHCC--CCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHh
Confidence            456667799999999999999998887753  4344555543     3455555555566554443 454555555543

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=90.61  E-value=0.73  Score=39.65  Aligned_cols=87  Identities=14%  Similarity=0.104  Sum_probs=58.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-cCchhHHHHHHHHhcCCCCceEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPEIL  154 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~l~~~~~~~~v~  154 (369)
                      -|.+.|.|+|+=||..+-.-+.+.  .++|+.. ..++.+++.+.++++..+...+ .|-.+.+.+++.+.         
T Consensus         5 gKvalVTGas~GIG~aia~~la~~--Ga~V~~~-~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~---------   72 (247)
T d2ew8a1           5 DKLAVITGGANGIGRAIAERFAVE--GADIAIA-DLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGK---------   72 (247)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEE-ESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH---------
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEE-ECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHH---------
Confidence            368999999999999999888876  6777654 5556677778888887776554 45455555554332         


Q ss_pred             ecHHHHHHHhcCCCCCEEEEeccCccC
Q 017567          155 AGEQGVIEAARHPDAVTVVTGIVGCAG  181 (369)
Q Consensus       155 ~G~~gl~~~~~~~~~D~Vv~AIvG~aG  181 (369)
                          .+.+  +....|++||. +|...
T Consensus        73 ----~~~~--~~G~iDilVnn-AG~~~   92 (247)
T d2ew8a1          73 ----QVIS--TFGRCDILVNN-AGIYP   92 (247)
T ss_dssp             ----HHHH--HHSCCCEEEEC-CCCCC
T ss_pred             ----HHHH--HcCCCCEEEEC-CCCCC
Confidence                1111  22468999886 45543

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=90.45  E-value=0.73  Score=39.29  Aligned_cols=64  Identities=14%  Similarity=0.115  Sum_probs=40.2

Q ss_pred             eeEEEEecCCh--HhHHHHHHHHhCCCceEEEEEeecCC--HHHHHHHHHhhCCCEEEEcCchhHHHHHHH
Q 017567           77 KPISVLGSTGS--IGTQTLDIVAEHEDKFRVVALAAGSN--ITLLADQVKRFKPQVVAVRNESLLDEIKEA  143 (369)
Q Consensus        77 kkI~ILGSTGS--IGtqTLdVI~~~pd~F~VvaLaag~N--v~lL~eQ~~~FkP~~V~v~de~~~~~l~~~  143 (369)
                      |++.|.|+||+  ||..+-.-+.+.  .++|+ ++.++.  .+...++..+.....+...|-.+.+.+++.
T Consensus         9 K~alITGas~~~GIG~aiA~~la~~--Ga~V~-i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   76 (256)
T d1ulua_           9 KKALVMGVTNQRSLGFAIAAKLKEA--GAEVA-LSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDAL   76 (256)
T ss_dssp             CEEEEESCCCSSSHHHHHHHHHHHT--TCEEE-EEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHH
T ss_pred             CEEEEECCCCCchHHHHHHHHHHHC--CCEEE-EEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHH
Confidence            67999999985  999998888876  67774 555432  233334444444444555665555555554

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=90.35  E-value=1.3  Score=34.05  Aligned_cols=60  Identities=12%  Similarity=0.214  Sum_probs=41.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKE  142 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~  142 (369)
                      ++|+|+|. |.+|+...+.+.+.  .++|+.+-  +|-+++.+...+|.. .+...|..+.+-|++
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~--g~~v~vid--~d~~~~~~~~~~~~~-~vi~Gd~~~~~~l~~   60 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEK--GHDIVLID--IDKDICKKASAEIDA-LVINGDCTKIKTLED   60 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHCSS-EEEESCTTSHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHC--CCCcceec--CChhhhhhhhhhhhh-hhccCcccchhhhhh
Confidence            37999998 99999999999876  46666653  677777665556653 344566555444443

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=90.34  E-value=0.97  Score=38.41  Aligned_cols=85  Identities=11%  Similarity=0.022  Sum_probs=53.2

Q ss_pred             CeeEEEEecCC--hHhHHHHHHHHhCCCceEEEEEeecCCH-HHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCce
Q 017567           76 PKPISVLGSTG--SIGTQTLDIVAEHEDKFRVVALAAGSNI-TLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPE  152 (369)
Q Consensus        76 ~kkI~ILGSTG--SIGtqTLdVI~~~pd~F~VvaLaag~Nv-~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~  152 (369)
                      -|++.|.|++|  .||..+-.-+.+.  .++|+...-+... +.+.+...+.....+...|-...+..++.+.       
T Consensus         5 gK~alITGaag~~GIG~AiA~~la~~--Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~-------   75 (274)
T d2pd4a1           5 GKKGLIVGVANNKSIAYGIAQSCFNQ--GATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYN-------   75 (274)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHTT--TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHH-------
T ss_pred             CCEEEEECCCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHH-------
Confidence            47899999988  4999999888875  7888855433322 3444555555555566666555555554432       


Q ss_pred             EEecHHHHHHHhcCCCCCEEEEecc
Q 017567          153 ILAGEQGVIEAARHPDAVTVVTGIV  177 (369)
Q Consensus       153 v~~G~~gl~~~~~~~~~D~Vv~AIv  177 (369)
                            -+.  .....+|++|+...
T Consensus        76 ------~~~--~~~g~id~lV~nag   92 (274)
T d2pd4a1          76 ------SVK--KDLGSLDFIVHSVA   92 (274)
T ss_dssp             ------HHH--HHTSCEEEEEECCC
T ss_pred             ------HHH--HHcCCCCeEEeecc
Confidence                  111  22346888887643

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=90.31  E-value=0.57  Score=40.87  Aligned_cols=64  Identities=19%  Similarity=0.267  Sum_probs=44.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCH---HHHHHHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNI---TLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv---~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      |.+.|.|+++-||..+-.-+.+.  .++|+. .++++-   +.+.++++++.++...+ .|-.+.+.+++.
T Consensus         8 K~alITGas~GIG~aia~~la~~--G~~Vv~-~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~   75 (261)
T d1geea_           8 KVVVITGSSTGLGKSMAIRFATE--KAKVVV-NYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINL   75 (261)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHT--TCEEEE-EESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC--CCEEEE-EeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            67999999999999998888875  677765 445543   45666777777765554 444444444443

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=90.03  E-value=0.91  Score=39.06  Aligned_cols=63  Identities=22%  Similarity=0.187  Sum_probs=41.6

Q ss_pred             eeE-EEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH---HHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           77 KPI-SVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD---QVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        77 kkI-~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~e---Q~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      ||| .|.|+|+=||..+-.-+.+.  .++|+.. + +|-+.|.+   +++++..+...+ .|-.+.+.+++.
T Consensus         1 KKValITGas~GIG~aia~~la~~--Ga~V~~~-~-r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~   68 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKD--GFAVAIA-D-YNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAA   68 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEE-E-SCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHC--CCEEEEE-E-CCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHH
Confidence            565 77899999999998888775  6777653 3 56665544   455555565544 565555555554

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=89.88  E-value=0.58  Score=40.58  Aligned_cols=63  Identities=17%  Similarity=0.144  Sum_probs=42.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH---HHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD---QVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~e---Q~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      |.+.|.|+|+-||..+-.-+.+.  .++|+...  +|.+.|.+   ++++...+...+ .|-...+.+++.
T Consensus        12 K~alITGas~GIG~aia~~la~~--Ga~V~~~~--r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~   78 (255)
T d1fmca_          12 KCAIITGAGAGIGKEIAITFATA--GASVVVSD--INADAANHVVDEIQQLGGQAFACRCDITSEQELSAL   78 (255)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTT--TCEEEEEE--SCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHH
Confidence            78999999999999998888875  68876643  56655554   455555665543 444444444443

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.72  E-value=0.87  Score=39.37  Aligned_cols=44  Identities=18%  Similarity=0.332  Sum_probs=33.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      |.+.|.|+|+-||..+..-+.+.  .++|+...  +|.+.|.+.+++.
T Consensus        11 Kv~lITGas~GIG~aiA~~la~~--G~~Vv~~~--r~~~~l~~~~~~l   54 (257)
T d1xg5a_          11 RLALVTGASGGIGAAVARALVQQ--GLKVVGCA--RTVGNIEELAAEC   54 (257)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHH
Confidence            67999999999999999999886  78876643  5666665554443

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=89.45  E-value=1  Score=38.90  Aligned_cols=63  Identities=21%  Similarity=0.157  Sum_probs=41.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHH---HHHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLA---DQVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~---eQ~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      |.+.|.|+|+-||..+-.-+.+.  .++|+...  +|-+.|.   +++++...+..++ .|-.+.+.+++.
T Consensus         6 K~alITGas~GIG~aia~~la~~--Ga~V~~~~--r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~   72 (260)
T d1zema1           6 KVCLVTGAGGNIGLATALRLAEE--GTAIALLD--MNREALEKAEASVREKGVEARSYVCDVTSEEAVIGT   72 (260)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            67999999999999998888876  67776533  5655554   4555555554443 554555555544

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=89.32  E-value=1  Score=38.80  Aligned_cols=85  Identities=20%  Similarity=0.293  Sum_probs=51.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHH---HHHHhhCCCEEEE-cCchhHHHHHHHHhcCCCCce
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLA---DQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPE  152 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~---eQ~~~FkP~~V~v-~de~~~~~l~~~l~~~~~~~~  152 (369)
                      |.+.|.|+|+-||..+-.-+.+.  .++|+...  +|-+.|.   ++++++..+...+ .|-...+.+++.+..      
T Consensus        11 KvalITGas~GIG~a~a~~la~~--Ga~V~~~~--r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~------   80 (251)
T d2c07a1          11 KVALVTGAGRGIGREIAKMLAKS--VSHVICIS--RTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINK------   80 (251)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTT--SSEEEEEE--SSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHH------
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEE--CCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH------
Confidence            66788899999999998888765  67776543  5665554   4555555554443 444444444443310      


Q ss_pred             EEecHHHHHHHhcCCCCCEEEEeccCccC
Q 017567          153 ILAGEQGVIEAARHPDAVTVVTGIVGCAG  181 (369)
Q Consensus       153 v~~G~~gl~~~~~~~~~D~Vv~AIvG~aG  181 (369)
                             +  ..+....|++|+. +|...
T Consensus        81 -------~--~~~~g~iDilvnn-ag~~~   99 (251)
T d2c07a1          81 -------I--LTEHKNVDILVNN-AGITR   99 (251)
T ss_dssp             -------H--HHHCSCCCEEEEC-CCCCC
T ss_pred             -------H--HHhcCCceeeeec-ccccc
Confidence                   1  1233468888885 34433

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=89.19  E-value=0.94  Score=38.91  Aligned_cols=85  Identities=13%  Similarity=0.187  Sum_probs=53.9

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCH---HHHHHHHHhhCCCEEEE-cCchhHHHHHHHHhcCCCCceE
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNI---TLLADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPEI  153 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv---~lL~eQ~~~FkP~~V~v-~de~~~~~l~~~l~~~~~~~~v  153 (369)
                      -+.|.|+|+-||..+..-+.+.  .++|+ ++.++|-   +.+.++++++..+...+ .|-.+.+.+++...        
T Consensus         3 V~lITGas~GIG~a~a~~la~~--Ga~V~-i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~--------   71 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKA--GCKVL-VNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMK--------   71 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHT--TCEEE-EEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHH--------
T ss_pred             EEEEeCCCcHHHHHHHHHHHHC--CCEEE-EEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHH--------
Confidence            4788899999999999988876  67776 4455554   45556666666655444 45455555554332        


Q ss_pred             EecHHHHHHHhcCCCCCEEEEeccCccC
Q 017567          154 LAGEQGVIEAARHPDAVTVVTGIVGCAG  181 (369)
Q Consensus       154 ~~G~~gl~~~~~~~~~D~Vv~AIvG~aG  181 (369)
                           .+  ..+....|++||. +|...
T Consensus        72 -----~~--~~~~g~iDiLVnn-Ag~~~   91 (244)
T d1edoa_          72 -----TA--IDAWGTIDVVVNN-AGITR   91 (244)
T ss_dssp             -----HH--HHHSSCCSEEEEC-CCCCC
T ss_pred             -----HH--HHHcCCCCccccc-ccccc
Confidence                 11  1223468999986 45444

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.11  E-value=0.81  Score=39.73  Aligned_cols=64  Identities=25%  Similarity=0.235  Sum_probs=42.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCCEEE-EcCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQVVA-VRNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F---kP~~V~-v~de~~~~~l~~~  143 (369)
                      -|.+.|.|+|+-||..+-.-+.+.  .++|+...  +|-+.|.+.++++   ..+... ..|-...+.+++.
T Consensus         8 gK~alVTGas~GIG~aiA~~la~~--Ga~V~~~~--r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   75 (259)
T d1xq1a_           8 AKTVLVTGGTKGIGHAIVEEFAGF--GAVIHTCA--RNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKL   75 (259)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHH
Confidence            378999999999999999998886  67776543  5666665555443   444333 3454444444443

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.95  E-value=0.77  Score=36.43  Aligned_cols=52  Identities=12%  Similarity=0.258  Sum_probs=40.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCc
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNE  134 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de  134 (369)
                      .+|.|+|+ |.||..++.+.+..  ..+|++..  +|-+++ +.++++..+.+....+
T Consensus        29 ~~VlV~Ga-G~vG~~~~~~ak~~--G~~Vi~~~--~~~~~~-~~a~~~Ga~~~i~~~~   80 (166)
T d1llua2          29 QWVAISGI-GGLGHVAVQYARAM--GLHVAAID--IDDAKL-ELARKLGASLTVNARQ   80 (166)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT--TCEEEEEE--SCHHHH-HHHHHTTCSEEEETTT
T ss_pred             CEEEEeec-cccHHHHHHHHHHc--CCccceec--chhhHH-HhhhccCccccccccc
Confidence            47999997 99999999999987  36888765  455555 6789999988775443

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=88.86  E-value=1.2  Score=38.32  Aligned_cols=85  Identities=18%  Similarity=0.127  Sum_probs=55.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCC--CE-EEEcCchhHHHHHHHHhcCCCCce
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKP--QV-VAVRNESLLDEIKEALANVEEKPE  152 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP--~~-V~v~de~~~~~l~~~l~~~~~~~~  152 (369)
                      -|.+.|.|+|+=||..+-.-+.+.  .++|+.. + +|-+++.+.+++...  +. ....|-.+.+.+++...       
T Consensus         6 gK~alVTGas~GIG~aia~~la~~--Ga~V~~~-~-r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~-------   74 (251)
T d1zk4a1           6 GKVAIITGGTLGIGLAIATKFVEE--GAKVMIT-G-RHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFD-------   74 (251)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEE-E-SCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHH-------
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEE-E-CCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHH-------
Confidence            378999999999999998888876  6776643 3 578888877777642  22 23355555555555432       


Q ss_pred             EEecHHHHHHHhcCCCCCEEEEeccCcc
Q 017567          153 ILAGEQGVIEAARHPDAVTVVTGIVGCA  180 (369)
Q Consensus       153 v~~G~~gl~~~~~~~~~D~Vv~AIvG~a  180 (369)
                            .+.+  +....|++||. +|..
T Consensus        75 ------~~~~--~~G~iDiLVnn-Ag~~   93 (251)
T d1zk4a1          75 ------ATEK--AFGPVSTLVNN-AGIA   93 (251)
T ss_dssp             ------HHHH--HHSSCCEEEEC-CCCC
T ss_pred             ------HHHH--HhCCceEEEec-cccc
Confidence                  1111  22468999986 3443

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=88.69  E-value=1.5  Score=37.88  Aligned_cols=64  Identities=13%  Similarity=0.134  Sum_probs=44.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCC--E-EEEcCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQ--V-VAVRNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~--~-V~v~de~~~~~l~~~  143 (369)
                      -|.+.|.|+|+-||..+-.-+.+.  .++|+...  +|-+.|.+.+++++..  . ....|-.+.+.+++.
T Consensus         6 gKvalITGas~GIG~aia~~la~~--Ga~V~i~~--r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~   72 (268)
T d2bgka1           6 DKVAIITGGAGGIGETTAKLFVRY--GAKVVIAD--IADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNL   72 (268)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHH
Confidence            478999999999999999888876  67776533  6788888888777531  1 223454445555544

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.36  E-value=0.15  Score=39.54  Aligned_cols=40  Identities=23%  Similarity=0.247  Sum_probs=34.9

Q ss_pred             CCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeeccc
Q 017567          167 PDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGP  208 (369)
Q Consensus       167 ~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~aG~  208 (369)
                      .++|+||.| +|++||.......++|++|+|-=|..-+ ||.
T Consensus         4 ~~yDviViG-aG~~Gl~~A~~La~~G~~V~vlE~~~~~-GG~   43 (297)
T d2bcgg1           4 TDYDVIVLG-TGITECILSGLLSVDGKKVLHIDKQDHY-GGE   43 (297)
T ss_dssp             CBCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSSS-CGG
T ss_pred             CcCCEEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCCCC-Ccc
Confidence            479999999 9999999999999999999998887644 553

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.86  E-value=2  Score=36.94  Aligned_cols=63  Identities=19%  Similarity=0.257  Sum_probs=42.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHH----HhhCCCEEEE-cCchhHHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQV----KRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~----~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      |.+.|.|+++-||..+-.-+.+.  .++|+...  +|.+++.+.+    +++..+...+ .|-.+.+.+++.
T Consensus         6 K~~lITGas~GIG~aia~~la~~--Ga~V~i~~--r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~   73 (251)
T d1vl8a_           6 RVALVTGGSRGLGFGIAQGLAEA--GCSVVVAS--RNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKL   73 (251)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHH
Confidence            68999999999999999888876  67766543  5777766544    4445555443 454444445443

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=87.78  E-value=1.2  Score=38.38  Aligned_cols=62  Identities=24%  Similarity=0.177  Sum_probs=41.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCCEEE-EcCchhHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQVVA-VRNESLLDEIKE  142 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F---kP~~V~-v~de~~~~~l~~  142 (369)
                      |.+.|.|+|+-||..+-.-+.+.  .++|+...  +|-+.|.+..+++   ..+..+ ..|-.+.+++++
T Consensus         9 K~alITGas~GIG~aia~~la~~--Ga~V~~~~--r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~   74 (259)
T d2ae2a_           9 CTALVTGGSRGIGYGIVEELASL--GASVYTCS--RNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQE   74 (259)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHH
Confidence            67999999999999998888875  67776643  5777666555544   444433 345444444444

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=87.75  E-value=1.2  Score=38.56  Aligned_cols=45  Identities=20%  Similarity=0.239  Sum_probs=33.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      -|.+.|.|+|+=||..+-.-+.+.  .++|+...  +|-+.|.+..++.
T Consensus         5 gK~alVTGas~GIG~aia~~la~~--Ga~V~l~~--r~~~~l~~~~~~l   49 (272)
T d1xkqa_           5 NKTVIITGSSNGIGRTTAILFAQE--GANVTITG--RSSERLEETRQII   49 (272)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHH
T ss_pred             CCEEEEeCcCcHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHH
Confidence            368999999999999999888876  67765543  5667666655554

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=87.46  E-value=1.6  Score=37.39  Aligned_cols=85  Identities=16%  Similarity=0.151  Sum_probs=51.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHH---HHHH-HhhCCCEEEE-cCchhHHHHHHHHhcCCCCc
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLL---ADQV-KRFKPQVVAV-RNESLLDEIKEALANVEEKP  151 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL---~eQ~-~~FkP~~V~v-~de~~~~~l~~~l~~~~~~~  151 (369)
                      |.+.|.|+|+-||..+-.-+.+.  .++|+. +++++.+++   .+++ .++..+...+ .|-.+.+.+++.+..     
T Consensus         5 K~alITGas~GIG~aiA~~la~~--Ga~V~~-~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~-----   76 (260)
T d1x1ta1           5 KVAVVTGSTSGIGLGIATALAAQ--GADIVL-NGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDN-----   76 (260)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHT--TCEEEE-ECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHH-----
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC--CCEEEE-EeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH-----
Confidence            67899999999999999888875  677654 555555444   3333 3344455544 454555555544321     


Q ss_pred             eEEecHHHHHHHhcCCCCCEEEEeccCcc
Q 017567          152 EILAGEQGVIEAARHPDAVTVVTGIVGCA  180 (369)
Q Consensus       152 ~v~~G~~gl~~~~~~~~~D~Vv~AIvG~a  180 (369)
                              +.  .+....|++||. +|..
T Consensus        77 --------~~--~~~G~iDiLVnn-AG~~   94 (260)
T d1x1ta1          77 --------AV--RQMGRIDILVNN-AGIQ   94 (260)
T ss_dssp             --------HH--HHHSCCSEEEEC-CCCC
T ss_pred             --------HH--HHhCCCcEEEee-cccc
Confidence                    11  122468999887 3443

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=87.42  E-value=0.8  Score=37.03  Aligned_cols=39  Identities=31%  Similarity=0.569  Sum_probs=31.1

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEee-cCCHHHH
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA-GSNITLL  117 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa-g~Nv~lL  117 (369)
                      ||+|.|+||=.|+..++.+.+.++ |++++..- +.+...+
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~-~~l~~~~d~~~~~~~~   40 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADD-LTLSAELDAGDPLSLL   40 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTT-SEEEEEECTTCCTHHH
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCC-CEEEEEEecCCchhhh
Confidence            799999999999999999998866 88887653 4444433

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=87.32  E-value=0.21  Score=41.88  Aligned_cols=29  Identities=21%  Similarity=0.410  Sum_probs=24.1

Q ss_pred             EEEEecCChHhHHHHHHHHhCCCceEEEEE
Q 017567           79 ISVLGSTGSIGTQTLDIVAEHEDKFRVVAL  108 (369)
Q Consensus        79 I~ILGSTGSIGtqTLdVI~~~pd~F~VvaL  108 (369)
                      |.|.|+||+||+...+.+.+.. .++|+++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g-~~~V~~~   30 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKG-ITDILVV   30 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTT-CCCEEEE
T ss_pred             EEEecCccHHHHHHHHHHHhCC-CCeEEEE
Confidence            7899999999999999888763 2468776

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=87.09  E-value=2.1  Score=36.64  Aligned_cols=80  Identities=19%  Similarity=0.175  Sum_probs=49.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH---HHHhhCCCEEEE-cCchhHHHHHHHHhcCCCCce
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD---QVKRFKPQVVAV-RNESLLDEIKEALANVEEKPE  152 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~e---Q~~~FkP~~V~v-~de~~~~~l~~~l~~~~~~~~  152 (369)
                      |...|.|+++-||..+-.-+.+.  .++|+.. + +|-+.|.+   .++++..+...+ .|-.+.+.+++.+.       
T Consensus         3 KValITGas~GIG~aia~~la~~--Ga~V~i~-~-r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~-------   71 (257)
T d2rhca1           3 EVALVTGATSGIGLEIARRLGKE--GLRVFVC-A-RGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVA-------   71 (257)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHT--TCEEEEE-E-SCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH-------
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEE-E-CCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHH-------
Confidence            34578899999999999988876  6777554 3 46555554   445555555443 45445555554332       


Q ss_pred             EEecHHHHHHHhcCCCCCEEEEe
Q 017567          153 ILAGEQGVIEAARHPDAVTVVTG  175 (369)
Q Consensus       153 v~~G~~gl~~~~~~~~~D~Vv~A  175 (369)
                            .+  ..+....|++||.
T Consensus        72 ------~~--~~~~g~iDilVnn   86 (257)
T d2rhca1          72 ------AV--VERYGPVDVLVNN   86 (257)
T ss_dssp             ------HH--HHHTCSCSEEEEC
T ss_pred             ------HH--HHHhCCCCEEEec
Confidence                  11  1223468999986

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=86.92  E-value=1.1  Score=38.89  Aligned_cols=64  Identities=17%  Similarity=0.192  Sum_probs=41.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CC---C-EEEEcCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KP---Q-VVAVRNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F---kP---~-~V~v~de~~~~~l~~~  143 (369)
                      -|.+.|.|+++-||..+-.-+.+.  .++|+...  +|-++|.+..++.   ..   + .....|-.+.+.+++.
T Consensus         4 gK~alITGas~GIG~aia~~la~~--Ga~V~~~~--r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~   74 (274)
T d1xhla_           4 GKSVIITGSSNGIGRSAAVIFAKE--GAQVTITG--RNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDI   74 (274)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHH
Confidence            367999999999999999888876  67776543  5666665554443   21   2 2344555555555543

>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Succinate dehydogenase
species: Escherichia coli [TaxId: 562]

Probab=86.77  E-value=0.12  Score=45.96  Aligned_cols=39  Identities=26%  Similarity=0.348  Sum_probs=35.6

Q ss_pred             CCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeecc
Q 017567          168 DAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG  207 (369)
Q Consensus       168 ~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~aG  207 (369)
                      ++|++|.+ +|.|||...++|.++|++|.|.-|..+.-|+
T Consensus         7 ~~DVlVVG-~G~AGl~AAl~aa~~G~~V~lleK~~~~gg~   45 (330)
T d1neka2           7 EFDAVVIG-AGGAGMRAALQISQSGQTCALLSKVFPTRSH   45 (330)
T ss_dssp             EESCEEEC-CSHHHHHHHHHHHHTTCCCEEECSSCGGGSG
T ss_pred             cCCEEEEC-cCHHHHHHHHHHHHcCCeEEEEeCCCCCCCc
Confidence            68999999 9999999999999999999999999877544

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=86.65  E-value=0.45  Score=38.52  Aligned_cols=142  Identities=15%  Similarity=0.139  Sum_probs=77.0

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHh-----CCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCC
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAE-----HEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEE  149 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~-----~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~  149 (369)
                      .|.||+|.||||.||.+..-.+.+     .....+++-+--+.+.+++..+..+..-                ..  . .
T Consensus         2 ~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~----------------~~--~-~   62 (154)
T d5mdha1           2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQD----------------CA--L-P   62 (154)
T ss_dssp             CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHH----------------TC--C-T
T ss_pred             CceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcc----------------cc--c-c
Confidence            477999999999999998776653     2345667766667777777666543210                00  0 0


Q ss_pred             CceEEecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeecccchhHHhhhcCCeEe---eccc
Q 017567          150 KPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKIL---PADS  226 (369)
Q Consensus       150 ~~~v~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~~~~Il---PVDS  226 (369)
                      ......+..+..+..+  ++|+||.+ .|..-- |    =+.-.++...|-+.+---++-+.+.+.+...-|+   |||.
T Consensus        63 ~~~~~~~~~~~~~~~~--~~dvVVit-ag~~~~-~----g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvsNPvD~  134 (154)
T d5mdha1          63 LLKDVIATDKEEIAFK--DLDVAILV-GSMPRR-D----GMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPANT  134 (154)
T ss_dssp             TEEEEEEESCHHHHTT--TCSEEEEC-CSCCCC-T----TCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHH
T ss_pred             cccccccCcccccccC--CceEEEEe-cccCCC-C----CCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEecCcHHH
Confidence            0111222223333333  58888875 344321 1    0122345556655555555555555544442333   8887


Q ss_pred             chhhHHHhhcCCCCCcc
Q 017567          227 EHSAIFQCIQGLPEGAL  243 (369)
Q Consensus       227 EHsAIfQ~L~g~~~~~v  243 (369)
                      ==..+++.-.|.+++.|
T Consensus       135 mt~v~~k~s~g~P~~~v  151 (154)
T d5mdha1         135 NCLTASKSAPSIPKENF  151 (154)
T ss_dssp             HHHHHHHTCTTSCGGGE
T ss_pred             HHHHHHHHcCCCCHHHE
Confidence            66655443336665544

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=86.64  E-value=0.57  Score=37.86  Aligned_cols=49  Identities=24%  Similarity=0.303  Sum_probs=35.5

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCC-----CceEEEEEeecCCHHHHHHHHHh
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHE-----DKFRVVALAAGSNITLLADQVKR  123 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~p-----d~F~VvaLaag~Nv~lL~eQ~~~  123 (369)
                      .|.||+|+||||.||....-.+...+     ..+.+.-+-...|.+++..++.+
T Consensus         3 ~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~   56 (154)
T d1y7ta1           3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVME   56 (154)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhh
Confidence            46799999999999998888777643     12445555667777777766554

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=86.30  E-value=0.75  Score=38.59  Aligned_cols=145  Identities=15%  Similarity=0.108  Sum_probs=80.5

Q ss_pred             cccceeEeecCCCCCCCCCccccccccCCCCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH-
Q 017567           44 TFGRIVQCSAQGPPPAWPGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK-  122 (369)
Q Consensus        44 ~~~~~~~~~~~~~~~a~p~~~~~~~~~~~~~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~-  122 (369)
                      ..++.++|+.|+-....--.    + ...-..+|||+|.|| |-.|-++-..+++.  .++|+-+=....+--....+. 
T Consensus        16 ~~~~~~~C~~Np~~g~e~~~----~-~~~~~~~k~V~IIGa-GPAGL~AA~~la~~--G~~Vtl~E~~~~~GG~l~~~~~   87 (179)
T d1ps9a3          16 FVGKVTSCLVNPRACHETKM----P-ILPAVQKKNLAVVGA-GPAGLAFAINAAAR--GHQVTLFDAHSEIGGQFNIAKQ   87 (179)
T ss_dssp             HTTCCCCCSSCTTTTCTTTS----C-CCSCSSCCEEEEECC-SHHHHHHHHHHHTT--TCEEEEEESSSSSCTTHHHHTT
T ss_pred             hcCCeeEEeeCccccCcccc----c-cCCCCCCcEEEEECc-cHHHHHHHHHHHhh--ccceEEEeccCccCceEEEEEe
Confidence            34577889988532221111    1 122355789999997 89999999999876  577776643322211111111 


Q ss_pred             -hhCCCEEEEcCchhHHHHHHHHhcCCCCceEEecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeeccc
Q 017567          123 -RFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKE  201 (369)
Q Consensus       123 -~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKE  201 (369)
                       .+++..     .+..+.+.+.+..  .++++..|.+--.+.  ..++|.||.|. |...-.+...-++.||++.     
T Consensus        88 ~p~~~~~-----~~~~~~~~~~~~~--~gV~i~l~~~Vt~~~--~~~~d~vilAt-G~~~~~~~~pg~~~g~~v~-----  152 (179)
T d1ps9a3          88 IPGKEEF-----YETLRYYRRMIEV--TGVTLKLNHTVTADQ--LQAFDETILAS-GIPNRALAQPLIDSGKTVH-----  152 (179)
T ss_dssp             STTCTTH-----HHHHHHHHHHHHH--HTCEEEESCCCCSSS--SCCSSEEEECC-CEECCTTHHHHHTTTCCEE-----
T ss_pred             CcccchH-----HHHHHHHHHhhhc--CCeEEEeCCEEcccc--cccceeEEEee-cCCCcccccchhccCCEEE-----
Confidence             111111     1222333333333  246777776532222  34689999985 7677777777777777664     


Q ss_pred             ceeecccchhH
Q 017567          202 TLIAGGPFVLP  212 (369)
Q Consensus       202 sLV~aG~li~~  212 (369)
                       ++-||+.-++
T Consensus       153 -vigggd~a~~  162 (179)
T d1ps9a3         153 -LIGGCDVAME  162 (179)
T ss_dssp             -ECGGGTCCSS
T ss_pred             -EECCcHhhhh
Confidence             2334555544

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.75  E-value=2.8  Score=37.01  Aligned_cols=45  Identities=18%  Similarity=0.194  Sum_probs=34.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F  124 (369)
                      -|.+.|.|+|+-||..+..-+.+.  .++|+..  .+|.+.|.+.+++.
T Consensus        12 gKvalITGas~GIG~aia~~la~~--Ga~Vvi~--~r~~~~l~~~~~el   56 (297)
T d1yxma1          12 GQVAIVTGGATGIGKAIVKELLEL--GSNVVIA--SRKLERLKSAADEL   56 (297)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHH
Confidence            378999999999999998888775  6777753  45777766655544

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=85.64  E-value=0.22  Score=43.39  Aligned_cols=22  Identities=23%  Similarity=0.353  Sum_probs=19.6

Q ss_pred             eEEEEecCChHhHHHHHHHHhC
Q 017567           78 PISVLGSTGSIGTQTLDIVAEH   99 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~   99 (369)
                      ||.|.|+||+||+...+.+.++
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~   23 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAG   23 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHT
T ss_pred             EEEEECCCCHHHHHHHHHHHHC
Confidence            6999999999999999977653

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=85.53  E-value=0.64  Score=37.61  Aligned_cols=32  Identities=19%  Similarity=0.331  Sum_probs=27.2

Q ss_pred             CCeeEEEEecC---ChHhHHHHHHHHhCCCceEEEEE
Q 017567           75 GPKPISVLGST---GSIGTQTLDIVAEHEDKFRVVAL  108 (369)
Q Consensus        75 ~~kkI~ILGST---GSIGtqTLdVI~~~pd~F~VvaL  108 (369)
                      .+|+|+|+|++   |+.|...++-+.++  .|+|+.+
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~--g~~v~pV   52 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEH--GYDVYPV   52 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHT--TCEEEEE
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHC--CCEEEEE
Confidence            47899999988   89999999999886  6777665

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=85.38  E-value=2.5  Score=36.27  Aligned_cols=52  Identities=17%  Similarity=0.180  Sum_probs=38.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec-CCHHHHHHHHHhhCCCEE
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-SNITLLADQVKRFKPQVV  129 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag-~Nv~lL~eQ~~~FkP~~V  129 (369)
                      -|.|.|.|+++-||.++-.-+.+.  ..+|+.++-. .+.+.+.++..++.-..+
T Consensus         5 gK~vlITGgs~GIG~~~A~~la~~--G~~vii~~r~~~~~~~~~~~~~~~~~~~~   57 (254)
T d1sbya1           5 NKNVIFVAALGGIGLDTSRELVKR--NLKNFVILDRVENPTALAELKAINPKVNI   57 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--CCSEEEEEESSCCHHHHHHHHHHCTTSEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEECCcccHHHHHHHHhhCCCCCE
Confidence            368999999999999999888876  6667777654 366666666655554343

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=85.28  E-value=2.1  Score=34.84  Aligned_cols=128  Identities=20%  Similarity=0.174  Sum_probs=67.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC--CHHHHHHHHHhhC---CCEEEEcCchhHHHHHHHHhcCCCC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS--NITLLADQVKRFK---PQVVAVRNESLLDEIKEALANVEEK  150 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~--Nv~lL~eQ~~~Fk---P~~V~v~de~~~~~l~~~l~~~~~~  150 (369)
                      .|+|.|+|+-|+ |+..+--+.++  .++-+-++.++  +.+++.+++++|+   +..+.+.+-...             
T Consensus        18 ~k~vlIlGaGGa-arai~~al~~~--g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-------------   81 (182)
T d1vi2a1          18 GKTMVLLGAGGA-STAIGAQGAIE--GLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQ-------------   81 (182)
T ss_dssp             TCEEEEECCSHH-HHHHHHHHHHT--TCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCH-------------
T ss_pred             CCEEEEECCcHH-HHHHHHHHhhc--CCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccc-------------
Confidence            379999999554 67777666665  34344444443  5677666665543   233333322222             


Q ss_pred             ceEEecHHHHHHHhcCCCCCEEEEecc-CccCcHH-----HHHHHHcCC---ceeeecccceeecccchhHHhhhcCCeE
Q 017567          151 PEILAGEQGVIEAARHPDAVTVVTGIV-GCAGLKP-----TVAAIEAGK---DIALANKETLIAGGPFVLPLAHKHNIKI  221 (369)
Q Consensus       151 ~~v~~G~~gl~~~~~~~~~D~Vv~AIv-G~aGL~p-----t~~Ai~~gK---~iaLANKEsLV~aG~li~~~a~k~~~~I  221 (369)
                             +.+.+...  ++|+|||+.+ |..+...     -...++.+.   ++.--.+||      -+++.|+++|.+.
T Consensus        82 -------~~~~~~~~--~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~Y~p~~T------~ll~~a~~~g~~~  146 (182)
T d1vi2a1          82 -------QAFAEALA--SADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHMT------KLLQQAQQAGCKT  146 (182)
T ss_dssp             -------HHHHHHHH--TCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECCCSSSSC------HHHHHHHTTTCEE
T ss_pred             -------cchhhhhc--ccceeccccCCccccccchhhhhHHHhhhcchhhHHhhcCcccc------HHHHHHHHCcCeE
Confidence                   23333332  4899999986 5443211     011111111   111111333      2467788888766


Q ss_pred             eecccchhhHHHhhc
Q 017567          222 LPADSEHSAIFQCIQ  236 (369)
Q Consensus       222 lPVDSEHsAIfQ~L~  236 (369)
                        +|=-+=-+||.+.
T Consensus       147 --i~Gl~Mli~Qa~~  159 (182)
T d1vi2a1         147 --IDGYGMLLWQGAE  159 (182)
T ss_dssp             --ECHHHHHHHHHHH
T ss_pred             --eccHHHHHHHHHH
Confidence              6777767777554

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=84.92  E-value=1.7  Score=37.42  Aligned_cols=64  Identities=20%  Similarity=0.221  Sum_probs=41.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh-----CC-CE-EEEcCchhHHHHHHH
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF-----KP-QV-VAVRNESLLDEIKEA  143 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~F-----kP-~~-V~v~de~~~~~l~~~  143 (369)
                      -|.+.|.|+|+-||..+-.-+.+.  .++|+..  .+|.+.|.+.+++.     .+ +. ....|-...+.+++.
T Consensus         5 gKvalVTGas~GIG~aia~~la~~--Ga~V~~~--~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~   75 (264)
T d1spxa_           5 EKVAIITGSSNGIGRATAVLFARE--GAKVTIT--GRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEI   75 (264)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEeCcCCHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHH
Confidence            367889999999999999888876  6777644  35777666555543     22 22 334555555555543

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=84.83  E-value=0.98  Score=36.86  Aligned_cols=48  Identities=19%  Similarity=0.330  Sum_probs=35.7

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCC
Q 017567           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKP  126 (369)
Q Consensus        75 ~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP  126 (369)
                      ..++|.|+|+ |-+|+.++.-+..+.  ++-+ ..++++.++..+.+++|.-
T Consensus        23 ~~~~ilviGa-G~~g~~v~~~L~~~g--~~~i-~v~nRt~~ka~~l~~~~~~   70 (159)
T d1gpja2          23 HDKTVLVVGA-GEMGKTVAKSLVDRG--VRAV-LVANRTYERAVELARDLGG   70 (159)
T ss_dssp             TTCEEEEESC-CHHHHHHHHHHHHHC--CSEE-EEECSSHHHHHHHHHHHTC
T ss_pred             ccCeEEEECC-CHHHHHHHHHHHhcC--CcEE-EEEcCcHHHHHHHHHhhhc
Confidence            4578999997 999999999888752  3222 2346888888888888863

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=84.74  E-value=0.19  Score=41.43  Aligned_cols=39  Identities=23%  Similarity=0.366  Sum_probs=35.3

Q ss_pred             CCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeeccc
Q 017567          167 PDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGP  208 (369)
Q Consensus       167 ~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~aG~  208 (369)
                      -++|+||.| .|.+||...+.|.+.|++++|..|+.+  ||.
T Consensus         4 ~~~DlvVIG-~GpaGl~aA~~aa~~G~~V~liE~~~~--GG~   42 (220)
T d1lvla1           4 IQTTLLIIG-GGPGGYVAAIRAGQLGIPTVLVEGQAL--GGT   42 (220)
T ss_dssp             EECSEEEEC-CSHHHHHHHHHHHHHTCCEEEECSSCT--THH
T ss_pred             cccCEEEEC-CCHHHHHHHHHHHHCCCcEEEEecCCC--CCc
Confidence            369999999 999999999999999999999999864  665

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=84.25  E-value=4.5  Score=34.44  Aligned_cols=65  Identities=22%  Similarity=0.190  Sum_probs=41.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC-CHHHHHH-HHHhhCCCEEEE-cCchhHHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS-NITLLAD-QVKRFKPQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~-Nv~lL~e-Q~~~FkP~~V~v-~de~~~~~l~~~  143 (369)
                      |++.|.|+++=||..+-.-+.+.  .++|+...-+. ..+.+.+ ..+++..+...+ .|-.+.+.+++.
T Consensus        10 K~alITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~   77 (260)
T d1h5qa_          10 KTIIVTGGNRGIGLAFTRAVAAA--GANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKT   77 (260)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHT--TEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHH
Confidence            78999999999999999888876  78876654321 2333333 335566655443 444444444443

>d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Escherichia coli [TaxId: 562]

Probab=84.10  E-value=0.24  Score=43.81  Aligned_cols=42  Identities=31%  Similarity=0.373  Sum_probs=36.1

Q ss_pred             CCCCEEEEeccCccCcHHHHHHHHc--CCceeeecccceeecccc
Q 017567          167 PDAVTVVTGIVGCAGLKPTVAAIEA--GKDIALANKETLIAGGPF  209 (369)
Q Consensus       167 ~~~D~Vv~AIvG~aGL~pt~~Ai~~--gK~iaLANKEsLV~aG~l  209 (369)
                      .++|+||.+ +|.|||...++|.++  |.+|+|..|..+..|+..
T Consensus         4 ~~~DVlVIG-~G~AGl~AA~~a~~~~~g~~V~lleK~~~~~g~s~   47 (311)
T d1kf6a2           4 FQADLAIVG-AGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTV   47 (311)
T ss_dssp             EECSEEEEC-CSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGG
T ss_pred             eecCEEEEC-ccHHHHHHHHHHHHhCCCCEEEEEECCCCCCCcHH
Confidence            368999999 999999999999998  567999999987766643

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=84.05  E-value=0.3  Score=42.00  Aligned_cols=38  Identities=34%  Similarity=0.605  Sum_probs=34.8

Q ss_pred             CCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeec
Q 017567          168 DAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAG  206 (369)
Q Consensus       168 ~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~a  206 (369)
                      ++|+||.+ .|++||...+.+.++|.+|+|.-|..+.-|
T Consensus        16 ~~DVlVIG-~G~aGl~aA~~la~~G~~V~lvEK~~~~gG   53 (308)
T d1y0pa2          16 TVDVVVVG-SGGAGFSAAISATDSGAKVILIEKEPVIGG   53 (308)
T ss_dssp             ECSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred             cCCEEEEC-cCHHHHHHHHHHHHCCCcEEEEecCCCCCC
Confidence            59999999 999999999999999999999999887543

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=83.88  E-value=0.92  Score=35.42  Aligned_cols=30  Identities=20%  Similarity=0.448  Sum_probs=25.5

Q ss_pred             eeEEEEecC---ChHhHHHHHHHHhCCCceEEEEE
Q 017567           77 KPISVLGST---GSIGTQTLDIVAEHEDKFRVVAL  108 (369)
Q Consensus        77 kkI~ILGST---GSIGtqTLdVI~~~pd~F~VvaL  108 (369)
                      |+|+|+|++   |+.|...++-+.++  .|+|+.+
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~--g~~V~pV   34 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSK--GFEVLPV   34 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHT--TCEEEEE
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHC--CCEEEEE
Confidence            789999977   89999999999887  6787765

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=83.43  E-value=1.5  Score=33.41  Aligned_cols=75  Identities=16%  Similarity=0.189  Sum_probs=46.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      |+++|+|. |.+|+...+.+.+.-  ++|+.+  -.|-+.+.+. +++.. .+.+.|....+.|++              
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g--~~vvvi--d~d~~~~~~~-~~~~~-~~~~gd~~~~~~l~~--------------   59 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMG--HEVLAV--DINEEKVNAY-ASYAT-HAVIANATEENELLS--------------   59 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTT--CCCEEE--ESCHHHHHHT-TTTCS-EEEECCTTCTTHHHH--------------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCC--CeEEEe--cCcHHHHHHH-HHhCC-cceeeecccchhhhc--------------
Confidence            67999998 999999999999874  445444  3576665544 44433 344555443322322              


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCc
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGC  179 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~  179 (369)
                             +...++|.|+.++..-
T Consensus        60 -------a~i~~a~~vi~~~~~~   75 (134)
T d2hmva1          60 -------LGIRNFEYVIVAIGAN   75 (134)
T ss_dssp             -------HTGGGCSEEEECCCSC
T ss_pred             -------cCCccccEEEEEcCch
Confidence                   2233578888777654

>d1xrsb1 c.23.6.1 (B:102-261) D-lysine 5,6-aminomutase beta subunit KamE, C-terminal domain {Clostridium sticklandii [TaxId: 1511]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Cobalamin (vitamin B12)-binding domain
family: Cobalamin (vitamin B12)-binding domain
domain: D-lysine 5,6-aminomutase beta subunit KamE, C-terminal domain
species: Clostridium sticklandii [TaxId: 1511]

Probab=83.42  E-value=2.2  Score=35.26  Aligned_cols=98  Identities=16%  Similarity=0.153  Sum_probs=64.1

Q ss_pred             CCeeEEEEecCC----hHhHHHHHHHHhCCC--------ceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCc---h----
Q 017567           75 GPKPISVLGSTG----SIGTQTLDIVAEHED--------KFRVVALAAGSNITLLADQVKRFKPQVVAVRNE---S----  135 (369)
Q Consensus        75 ~~kkI~ILGSTG----SIGtqTLdVI~~~pd--------~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de---~----  135 (369)
                      +.|..+|+|..|    .||.+.+..+-+.-.        .|+|+=|-...-.+.+.+.+++.+|+.|+++.-   .    
T Consensus        17 ~r~~~vv~~~~g~D~HdiG~~iv~~~l~~~G~~~~~~~~~~eVi~LG~~vp~e~~v~~a~e~~~d~VglS~l~t~~~~h~   96 (160)
T d1xrsb1          17 GRKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDFIKKAVELEADVLLVSQTVTQKNVHI   96 (160)
T ss_dssp             CSCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHHHHHHHHTTCSEEEEECCCCTTSHHH
T ss_pred             CCCcEEEEEEeCCcHHHHHHHHHHHHHHHcCCcccccccceEEEeCCCCCCHHHHHHHHHhcCCCEEEEeecccccchhH
Confidence            344567778888    799887776665432        299999999999999999999999999999752   1    


Q ss_pred             -hHHHHHHHHhcCCC--CceEEecHHHH-HHHhcCCCCCEE
Q 017567          136 -LLDEIKEALANVEE--KPEILAGEQGV-IEAARHPDAVTV  172 (369)
Q Consensus       136 -~~~~l~~~l~~~~~--~~~v~~G~~gl-~~~~~~~~~D~V  172 (369)
                       ...++-+.|...+.  ++.|++|-..+ .+.++...+|.+
T Consensus        97 ~~~~~~i~~l~~~g~~d~v~vivGG~~~~~~~a~~~GaD~~  137 (160)
T d1xrsb1          97 QNMTHLIELLEAEGLRDRFVLLCGGPRINNEIAKELGYDAG  137 (160)
T ss_dssp             HHHHHHHHHHHHTTCGGGSEEEEECTTCCHHHHHTTTCSEE
T ss_pred             HHHHHHHHHHHHcCCCCceEEEEcCCCCCHHHHHHcCCCEE
Confidence             12333344443222  35666664221 234445456554

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=83.34  E-value=0.91  Score=37.23  Aligned_cols=46  Identities=15%  Similarity=0.333  Sum_probs=35.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKP  126 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP  126 (369)
                      .|+|.|+|+-|. +++.+-.+.+...+..|+    ++|.+++.++++.|+.
T Consensus        18 ~k~vlIlGaGGa-arai~~aL~~~~~~i~I~----nR~~~~a~~l~~~~~~   63 (171)
T d1p77a1          18 NQHVLILGAGGA-TKGVLLPLLQAQQNIVLA----NRTFSKTKELAERFQP   63 (171)
T ss_dssp             TCEEEEECCSHH-HHTTHHHHHHTTCEEEEE----ESSHHHHHHHHHHHGG
T ss_pred             CCEEEEECCcHH-HHHHHHHHcccCceeeec----cchHHHHHHHHHHHhh
Confidence            468999999666 888888777766554433    6888999888888874

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.15  E-value=4.6  Score=34.31  Aligned_cols=80  Identities=13%  Similarity=0.162  Sum_probs=51.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC----C-CEEE-EcCchhHHHHHHHHhcCCCC
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK----P-QVVA-VRNESLLDEIKEALANVEEK  150 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~Fk----P-~~V~-v~de~~~~~l~~~l~~~~~~  150 (369)
                      |.+.|.|+++=||..+-.-+.+.  .++|+..  .+|.+.|.+...+.+    + +..+ ..|-.+.+.+++.+..    
T Consensus         4 KvalITGas~GIG~aia~~la~~--Ga~V~i~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~----   75 (254)
T d2gdza1           4 KVALVTGAAQGIGRAFAEALLLK--GAKVALV--DWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRK----   75 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHH----
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHH----
Confidence            67899999999999999998876  6776654  367777776666542    2 2332 2455555555554321    


Q ss_pred             ceEEecHHHHHHHhcCCCCCEEEEe
Q 017567          151 PEILAGEQGVIEAARHPDAVTVVTG  175 (369)
Q Consensus       151 ~~v~~G~~gl~~~~~~~~~D~Vv~A  175 (369)
                               +.+  +....|++||.
T Consensus        76 ---------~~~--~~G~iDilVnn   89 (254)
T d2gdza1          76 ---------VVD--HFGRLDILVNN   89 (254)
T ss_dssp             ---------HHH--HHSCCCEEEEC
T ss_pred             ---------HHH--HcCCcCeeccc
Confidence                     111  22458898886

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=83.04  E-value=4  Score=34.86  Aligned_cols=61  Identities=13%  Similarity=-0.015  Sum_probs=40.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEA  143 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~  143 (369)
                      |.+.|.|+++-||..+..-+.+.  .++|+...-  |-+. .+.+++..-.++ -.|-.+.+.+++.
T Consensus         6 K~alITGas~GIG~aia~~la~~--G~~V~~~~~--~~~~-~~~~~~~~~~~~-~~Dv~~~~~v~~~   66 (248)
T d2d1ya1           6 KGVLVTGGARGIGRAIAQAFARE--GALVALCDL--RPEG-KEVAEAIGGAFF-QVDLEDERERVRF   66 (248)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEES--STTH-HHHHHHHTCEEE-ECCTTCHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEEC--CHHH-HHHHHHcCCeEE-EEeCCCHHHHHHH
Confidence            67999999999999999888876  677765443  3232 345566665544 3455555555543

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=82.97  E-value=4.9  Score=32.05  Aligned_cols=135  Identities=19%  Similarity=0.183  Sum_probs=66.9

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceE
Q 017567           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI  153 (369)
Q Consensus        74 ~~~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v  153 (369)
                      .+.+||+|+|+ |.||....-.+...+---||+-+  -.|-+++..++.                +|..........+++
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~--Di~~~~~~g~a~----------------Dl~~~~~~~~~~~~~   64 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLI--DANESKAIGDAM----------------DFNHGKVFAPKPVDI   64 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEE--CSSHHHHHHHHH----------------HHHHHTTSSSSCCEE
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEE--eeccccccchhc----------------cHhhCccccCCCeEE
Confidence            34568999997 99998876666654333344432  235555543333                233332222334556


Q ss_pred             EecHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCceeeecccceeecccchhHHhhhcCCeEe----ecccchh
Q 017567          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKIL----PADSEHS  229 (369)
Q Consensus       154 ~~G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~iaLANKEsLV~aG~li~~~a~k~~~~Il----PVDSEHs  229 (369)
                      ..++.     ....++|+||.+ +|...- |    -+..-+++..|-+.+-.=++-+.+.+-  ++-++    |||.=-.
T Consensus        65 ~~~d~-----~~l~daDvvvit-ag~~~~-~----~~~R~dl~~~N~~i~~~i~~~i~~~~p--~a~~ivvtNPvd~~t~  131 (148)
T d1ldna1          65 WHGDY-----DDCRDADLVVIC-AGANQK-P----GETRLDLVDKNIAIFRSIVESVMASGF--QGLFLVATNPVDILTY  131 (148)
T ss_dssp             EECCG-----GGTTTCSEEEEC-CSCCCC-T----TTCSGGGHHHHHHHHHHHHHHHHHHTC--CSEEEECSSSHHHHHH
T ss_pred             EECCH-----HHhccceeEEEe-cccccc-c----CcchhHHHHHHHHHHHHHHHHHHhhCC--CceEEEecCccHHHHH
Confidence            55543     223469999987 333221 1    112234444554433222222222221  23333    8996444


Q ss_pred             hHHHhhcCCCCC
Q 017567          230 AIFQCIQGLPEG  241 (369)
Q Consensus       230 AIfQ~L~g~~~~  241 (369)
                      . +|-..|.+++
T Consensus       132 ~-~~k~sg~p~~  142 (148)
T d1ldna1         132 A-TWKFSGLPHE  142 (148)
T ss_dssp             H-HHHHHTCCGG
T ss_pred             H-HHHHHCcChh
Confidence            4 4444566654

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=82.79  E-value=0.96  Score=35.91  Aligned_cols=96  Identities=11%  Similarity=0.041  Sum_probs=57.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      .+|+|.|+. -+|..++.+.+..  ..+++..+. ++-++ .+.+++|..+.+.-..+.. +...               
T Consensus        30 ~tVlI~GaG-GvG~~aiq~ak~~--G~~~vi~~~-~~~~k-~~~ak~lGa~~~i~~~~~~-~~~~---------------   88 (176)
T d2fzwa2          30 SVCAVFGLG-GVGLAVIMGCKVA--GASRIIGVD-INKDK-FARAKEFGATECINPQDFS-KPIQ---------------   88 (176)
T ss_dssp             CEEEEECCS-HHHHHHHHHHHHH--TCSEEEEEC-SCGGG-HHHHHHHTCSEEECGGGCS-SCHH---------------
T ss_pred             CEEEEecch-hHHHHHHHHHHHH--hcCceEEEc-ccHHH-HHHHHHhCCcEEEeCCchh-hHHH---------------
Confidence            379999985 5899999999987  444444343 34444 4678999988876442211 0011               


Q ss_pred             HHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCce
Q 017567          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~i  195 (369)
                        ...+......+|+|++.+-+-.-+.-.+..++.|..+
T Consensus        89 --~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~  125 (176)
T d2fzwa2          89 --EVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGV  125 (176)
T ss_dssp             --HHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCE
T ss_pred             --HHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCCcee
Confidence              1111122336999999865445455555555555444

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=82.74  E-value=3.3  Score=34.78  Aligned_cols=36  Identities=17%  Similarity=0.423  Sum_probs=29.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN  113 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~N  113 (369)
                      -|+|.|.|+||=||..+.+-+.+.  .++|+.+....+
T Consensus         2 gK~vlITGas~GIG~a~a~~l~~~--G~~V~~~~~~~~   37 (236)
T d1dhra_           2 ARRVLVYGGRGALGSRCVQAFRAR--NWWVASIDVVEN   37 (236)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESSCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCcc
Confidence            478999999999999999999875  788887654443

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.30  E-value=1.9  Score=36.79  Aligned_cols=55  Identities=20%  Similarity=0.097  Sum_probs=40.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchh
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL  136 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~  136 (369)
                      |++.|.|+++.||..+-.-+.+.  .++|+...  +|-++|.+..+++. ....+.|...
T Consensus         7 K~alITGas~GIG~aia~~la~~--G~~Vi~~~--r~~~~l~~~~~~~~-~~~~~~d~~~   61 (245)
T d2ag5a1           7 KVIILTAAAQGIGQAAALAFARE--GAKVIATD--INESKLQELEKYPG-IQTRVLDVTK   61 (245)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHGGGGGSTT-EEEEECCTTC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEe--CCHHHHHHHHhccC-Cceeeeeccc
Confidence            67999999999999999888876  67887754  67788877766554 3344455443

>d1s8na_ c.23.1.1 (A:) Probable two-component system transcriptional regulator Rv1626 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Probable two-component system transcriptional regulator Rv1626
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=82.15  E-value=3  Score=33.83  Aligned_cols=97  Identities=16%  Similarity=0.175  Sum_probs=60.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEe
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~  155 (369)
                      |+||.|.==-=.+=...-+++++.  .|+|++.+  +|.+...+++++.+|+.|.+.-.         ++       -..
T Consensus         3 p~kILiVDD~~~~r~~l~~~L~~~--g~~vv~~a--~~g~eal~~~~~~~pDlvllDi~---------mP-------~~d   62 (190)
T d1s8na_           3 PRRVLIAEDEALIRMDLAEMLREE--GYEIVGEA--GDGQEAVELAELHKPDLVIMDVK---------MP-------RRD   62 (190)
T ss_dssp             CCEEEEECSSHHHHHHHHHHHHHT--TCEEEEEE--SSHHHHHHHHHHHCCSEEEEESS---------CS-------SSC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHhcCCCCEEEEecc---------cc-------Ccc
Confidence            455555555445555555666653  69988765  57788889999999999887310         00       123


Q ss_pred             cHHHHHHHhcCCCCCEEEEeccCccCcHHHHHHHHcCCc
Q 017567          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (369)
Q Consensus       156 G~~gl~~~~~~~~~D~Vv~AIvG~aGL~pt~~Ai~~gK~  194 (369)
                      |-+-+.++-+..+..++  .++|.....-...|+++|-.
T Consensus        63 G~e~~~~ir~~~~~pIi--~lTa~~~~~~~~~al~~Ga~   99 (190)
T d1s8na_          63 GIDAASEIASKRIAPIV--VLTAFSQRDLVERARDAGAM   99 (190)
T ss_dssp             HHHHHHHHHHTTCSCEE--EEEEGGGHHHHHTTGGGSCE
T ss_pred             hHHHHHHHHhcCCCCEE--EEeCCCCHHHHHHHHHcCCC
Confidence            44445555444444333  47777777777788888753

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=81.92  E-value=4.6  Score=32.38  Aligned_cols=75  Identities=19%  Similarity=0.280  Sum_probs=43.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCceEEec
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~v~~G  156 (369)
                      |||+|+|+ |.||.+..--+....---+++-+  ..|-+++..++.                +|.......+....+..|
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~--Di~~~~~~g~~~----------------Dl~~a~~~~~~~~~~~~~   62 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFI--DANEAKVKADQI----------------DFQDAMANLEAHGNIVIN   62 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEE--CSSHHHHHHHHH----------------HHHHHGGGSSSCCEEEES
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEE--ecccchhhhHHH----------------hhhccccccCCccceecc
Confidence            79999995 99998876655544332345532  345555543332                344444333344556555


Q ss_pred             HHHHHHHhcCCCCCEEEEe
Q 017567          157 EQGVIEAARHPDAVTVVTG  175 (369)
Q Consensus       157 ~~gl~~~~~~~~~D~Vv~A  175 (369)
                      +.  .   ...++|+||.+
T Consensus        63 d~--~---~l~~adiVVit   76 (146)
T d1hyha1          63 DW--A---ALADADVVIST   76 (146)
T ss_dssp             CG--G---GGTTCSEEEEC
T ss_pred             CH--H---HhccccEEEEe
Confidence            42  2   22468999876

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=81.54  E-value=5.8  Score=32.95  Aligned_cols=88  Identities=14%  Similarity=0.030  Sum_probs=48.4

Q ss_pred             CeeEEEEecCC--hHhHHHHHHHHhCCCceEEEEEeecCC-HHHHHHHHHhhCCCEEEEcCchhHHHHHHHHhcCCCCce
Q 017567           76 PKPISVLGSTG--SIGTQTLDIVAEHEDKFRVVALAAGSN-ITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPE  152 (369)
Q Consensus        76 ~kkI~ILGSTG--SIGtqTLdVI~~~pd~F~VvaLaag~N-v~lL~eQ~~~FkP~~V~v~de~~~~~l~~~l~~~~~~~~  152 (369)
                      -|++.|.|++|  -||.++-+-+.+.  .++|+...-+.+ .+.+.++........+...+............       
T Consensus         5 gK~~lITGass~~GIG~aiA~~l~~~--G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------   75 (258)
T d1qsga_           5 GKRILVTGVASKLSIAYGIAQAMHRE--GAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFA-------   75 (258)
T ss_dssp             TCEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHH-------
T ss_pred             CCEEEEECCCCchhHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHH-------
Confidence            37899999998  6889887777765  788774432222 23333334443334444444444333333221       


Q ss_pred             EEecHHHHHHHhcCCCCCEEEEeccCcc
Q 017567          153 ILAGEQGVIEAARHPDAVTVVTGIVGCA  180 (369)
Q Consensus       153 v~~G~~gl~~~~~~~~~D~Vv~AIvG~a  180 (369)
                              .........|.+|+......
T Consensus        76 --------~~~~~~~~~d~~v~~a~~~~   95 (258)
T d1qsga_          76 --------ELGKVWPKFDGFVHSIGFAP   95 (258)
T ss_dssp             --------HHHTTCSSEEEEEECCCCCC
T ss_pred             --------HhhhcccccceEEEeecccc
Confidence                    11223445788887754443

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=81.34  E-value=0.38  Score=39.75  Aligned_cols=48  Identities=25%  Similarity=0.431  Sum_probs=38.0

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEE
Q 017567           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVA  130 (369)
Q Consensus        78 kI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~  130 (369)
                      .|.|.|+||.+|+.++++.+..  ..+|++.+....  + .+.++++..+++.
T Consensus        26 ~VLV~gaaGgVG~~avQlAk~~--Ga~Viat~~s~~--k-~~~~~~lGad~vi   73 (167)
T d1tt7a2          26 SVLVTGATGGVGGIAVSMLNKR--GYDVVASTGNRE--A-ADYLKQLGASEVI   73 (167)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHH--TCCEEEEESSSS--T-HHHHHHHTCSEEE
T ss_pred             EEEEeCCcchHHHHHHHHHHHc--CCceEEEecCHH--H-HHHHHhhcccceE
Confidence            6999999999999999999987  678999876432  1 3445777888764

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.28  E-value=5.3  Score=34.66  Aligned_cols=67  Identities=10%  Similarity=0.082  Sum_probs=40.3

Q ss_pred             eeEE-EEecCChHhHHHHHHHHhCCCceEEEEEeec--CCHHHHHHHHHhhC---CCEEEE-cCchhHHHHHHH
Q 017567           77 KPIS-VLGSTGSIGTQTLDIVAEHEDKFRVVALAAG--SNITLLADQVKRFK---PQVVAV-RNESLLDEIKEA  143 (369)
Q Consensus        77 kkI~-ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag--~Nv~lL~eQ~~~Fk---P~~V~v-~de~~~~~l~~~  143 (369)
                      |||+ |.|+|+=||..+-..+.+.-.+--++.+++.  .+.+.|.+.+++..   .+..++ .|-.+.+.++..
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~   75 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAA   75 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhh
Confidence            4565 5699999999999988876444334444443  23456666666542   344333 455555555544

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.10  E-value=4.5  Score=34.55  Aligned_cols=43  Identities=26%  Similarity=0.259  Sum_probs=33.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~  123 (369)
                      |++.|.|+|+=||..+-.-+.+.  .++|+..+  +|.+.|.+..++
T Consensus        15 K~alITGassGIG~aiA~~la~~--G~~Vil~~--r~~~~l~~~~~~   57 (269)
T d1xu9a_          15 KKVIVTGASKGIGREMAYHLAKM--GAHVVVTA--RSKETLQKVVSH   57 (269)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHH
Confidence            78999999999999999998886  67776653  677777665543

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=80.80  E-value=0.82  Score=37.92  Aligned_cols=52  Identities=21%  Similarity=0.401  Sum_probs=40.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEc
Q 017567           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVR  132 (369)
Q Consensus        76 ~kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~  132 (369)
                      ...|.|.|++|.+|.-++++.+..  ..+|++.+...  ++ .+.++++..+++.-.
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~--Ga~Via~~~~~--~k-~~~~~~lGad~vi~~   83 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKL--GYQVVAVSGRE--ST-HEYLKSLGASRVLPR   83 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCG--GG-HHHHHHHTEEEEEEG
T ss_pred             CCcEEEEEccccchHHHHHHHHHc--CCCeEEEecch--hH-HHHHHhhcccccccc
Confidence            347999999999999999999998  78899877542  33 245677787777644

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=80.52  E-value=3.8  Score=35.20  Aligned_cols=63  Identities=14%  Similarity=0.159  Sum_probs=40.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh---hCC--CEEE-EcCchhHHHHHHH
Q 017567           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR---FKP--QVVA-VRNESLLDEIKEA  143 (369)
Q Consensus        77 kkI~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~---FkP--~~V~-v~de~~~~~l~~~  143 (369)
                      |.+.|.|+++-||..+-.-+.+.  .++|+...  +|-++|.+...+   ..+  +... ..|-.+.+.+++.
T Consensus         5 K~alITGas~GIG~aia~~la~~--Ga~V~i~~--r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~   73 (258)
T d1iy8a_           5 RVVLITGGGSGLGRATAVRLAAE--GAKLSLVD--VSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAY   73 (258)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHH
Confidence            68999999999999999888876  67766433  466665544443   333  3333 3454455555543

>d3bula2 c.23.6.1 (A:741-896) Methionine synthase, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Cobalamin (vitamin B12)-binding domain
family: Cobalamin (vitamin B12)-binding domain
domain: Methionine synthase, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=80.17  E-value=3  Score=34.15  Aligned_cols=52  Identities=13%  Similarity=0.331  Sum_probs=44.7

Q ss_pred             EEecCC----hHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEcC
Q 017567           81 VLGSTG----SIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRN  133 (369)
Q Consensus        81 ILGSTG----SIGtqTLdVI~~~pd~F~VvaLaag~Nv~lL~eQ~~~FkP~~V~v~d  133 (369)
                      |+|.-+    +||...+..+-+. ..|+|+=|-.+.-.+.+.+.+++.+|+.++++.
T Consensus        10 vi~tv~gD~HdiG~~iv~~~l~~-~G~~Vi~LG~~~p~e~~~~~~~~~~~d~i~lS~   65 (156)
T d3bula2          10 VIATVKGDVHDIGKNIVGVVLQC-NNYEIVDLGVMVPAEKILRTAKEVNADLIGLSG   65 (156)
T ss_dssp             EEEEBTTCCCCHHHHHHHHHHHT-TTCEEEECCSSBCHHHHHHHHHHHTCSEEEEEC
T ss_pred             EEEeeCCChhhHHHHHHHHHHHH-CCCEEEECCCCCCHHHHHHHHHhhCCCEEEEec
Confidence            345544    8999999888764 579999999999999999999999999999965